Query 007189
Match_columns 613
No_of_seqs 186 out of 820
Neff 5.1
Searched_HMMs 46136
Date Thu Mar 28 20:09:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007189.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007189hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00148 potassium transporter 100.0 7E-211 2E-215 1751.6 53.6 609 2-613 158-785 (785)
2 PLN00151 potassium transporter 100.0 3E-210 6E-215 1745.9 54.4 602 2-613 235-852 (852)
3 PLN00149 potassium transporter 100.0 1E-209 2E-214 1744.0 54.8 609 1-613 157-779 (779)
4 PLN00150 potassium ion transpo 100.0 1E-209 2E-214 1741.2 54.4 601 1-613 174-779 (779)
5 TIGR00794 kup potassium uptake 100.0 2E-190 5E-195 1578.7 51.4 559 2-613 129-688 (688)
6 PRK10745 trkD potassium transp 100.0 4E-174 9E-179 1429.5 44.4 515 2-613 105-622 (622)
7 PF02705 K_trans: K+ potassium 100.0 3E-164 6E-169 1341.4 32.9 441 2-446 94-534 (534)
8 COG3158 Kup K+ transporter [In 100.0 2E-159 4E-164 1284.5 42.9 519 1-613 109-627 (627)
9 TIGR00911 2A0308 L-type amino 87.3 0.92 2E-05 50.7 5.7 87 41-131 165-255 (501)
10 COG0531 PotE Amino acid transp 76.1 21 0.00046 38.7 10.7 179 40-222 133-324 (466)
11 TIGR00907 2A0304 amino acid pe 69.3 22 0.00049 39.5 9.1 26 321-346 453-478 (482)
12 TIGR03813 put_Glu_GABA_T putat 69.0 49 0.0011 36.9 11.7 19 322-340 434-452 (474)
13 TIGR00909 2A0306 amino acid tr 68.9 32 0.00069 37.4 10.1 168 43-223 135-317 (429)
14 PRK10655 potE putrescine trans 68.3 1.5E+02 0.0034 32.4 15.3 43 43-85 125-170 (438)
15 PF14362 DUF4407: Domain of un 56.8 1E+02 0.0022 32.5 10.8 52 263-314 15-70 (301)
16 PRK15049 L-asparagine permease 56.2 61 0.0013 36.7 9.6 23 43-65 146-168 (499)
17 TIGR00930 2a30 K-Cl cotranspor 56.2 76 0.0016 39.3 11.0 33 41-74 203-235 (953)
18 KOG3145 Cystine transporter Cy 54.3 22 0.00047 38.4 5.2 87 45-142 213-339 (372)
19 COG4059 MtrE Tetrahydromethano 50.1 16 0.00035 37.8 3.3 39 309-347 243-287 (304)
20 PRK10435 cadB lysine/cadaverin 49.7 75 0.0016 35.0 8.8 23 44-66 124-146 (435)
21 PF06570 DUF1129: Protein of u 49.2 76 0.0016 31.8 8.0 21 321-341 179-199 (206)
22 PRK11021 putative transporter; 45.7 3.5E+02 0.0075 29.4 13.1 27 41-67 115-141 (410)
23 PF13520 AA_permease_2: Amino 39.5 46 0.001 36.0 5.2 249 14-278 88-366 (426)
24 KOG3643 GABA receptor [Signal 38.0 27 0.00059 39.4 3.1 90 216-309 225-324 (459)
25 TIGR00910 2A0307_GadC glutamat 33.9 2.8E+02 0.0061 31.5 10.4 46 119-164 202-249 (507)
26 PRK10249 phenylalanine transpo 33.7 2.2E+02 0.0048 31.7 9.5 102 44-147 138-247 (458)
27 PRK11357 frlA putative fructos 33.6 3.3E+02 0.0071 30.0 10.7 45 42-86 128-175 (445)
28 PF00324 AA_permease: Amino ac 31.5 34 0.00074 38.0 2.7 34 114-147 203-238 (478)
29 TIGR00906 2A0303 cationic amin 31.1 6E+02 0.013 29.3 12.6 45 41-85 161-208 (557)
30 COG2179 Predicted hydrolase of 30.3 11 0.00024 37.4 -1.3 61 548-609 55-118 (175)
31 PRK10746 putative transport pr 28.5 3.2E+02 0.0069 30.6 9.6 25 322-346 427-451 (461)
32 TIGR00908 2A0305 ethanolamine 28.1 2.2E+02 0.0048 31.2 8.2 24 43-66 123-146 (442)
33 PRK10644 arginine:agmatin anti 27.9 1.5E+02 0.0032 32.8 6.7 23 43-65 127-149 (445)
34 PRK10238 aromatic amino acid t 27.7 5.1E+02 0.011 28.8 11.0 43 117-160 206-250 (456)
35 PRK11387 S-methylmethionine tr 27.2 3.6E+02 0.0077 30.1 9.7 20 45-64 133-152 (471)
36 cd05900 Ig_Aggrecan Immunoglob 26.7 90 0.0019 28.5 4.0 30 420-449 73-102 (112)
37 PRK11049 D-alanine/D-serine/gl 24.8 5.7E+02 0.012 28.5 10.7 105 118-223 218-333 (469)
38 PF05545 FixQ: Cbb3-type cytoc 24.3 76 0.0017 24.7 2.7 28 331-358 20-47 (49)
39 PF08733 PalH: PalH/RIM21; In 24.2 5E+02 0.011 28.5 9.9 139 203-350 168-325 (348)
40 TIGR03810 arg_ornith_anti argi 23.6 6.9E+02 0.015 27.8 11.1 44 180-223 274-317 (468)
41 TIGR00905 2A0302 transporter, 23.5 2.6E+02 0.0057 31.1 7.8 43 181-223 279-321 (473)
42 PF06155 DUF971: Protein of un 23.3 46 0.001 28.8 1.4 14 583-596 26-39 (89)
43 PF05313 Pox_P21: Poxvirus P21 22.1 1.1E+02 0.0023 30.9 3.8 60 145-215 89-149 (189)
44 PF05297 Herpes_LMP1: Herpesvi 21.1 32 0.00069 36.9 0.0 61 284-347 125-190 (381)
45 TIGR01940 nqrE NADH:ubiquinone 20.4 3.2E+02 0.0069 28.0 6.9 45 244-288 16-62 (200)
No 1
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=7.3e-211 Score=1751.61 Aligned_cols=609 Identities=52% Similarity=0.947 Sum_probs=555.5
Q ss_pred eeeeehhhhhcCccccchhHHHHhhhcccccCCCCCCceeehhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHh
Q 007189 2 LVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGI 81 (613)
Q Consensus 2 l~l~G~~m~~gDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~ 81 (613)
+|++|+||+||||+|||||||||||||||++.|++++++||+|||+||++||++||+||+|||++|||||++||++|+++
T Consensus 158 l~l~G~am~~gDgvlTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~i 237 (785)
T PLN00148 158 VVLFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSI 237 (785)
T ss_pred HHHHHHHHHHhccccchhHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999889999999999999999999999999999999999999999999
Q ss_pred hhhhccccCcceeEecChHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccceeeehhhhHhhHHHhhhccc
Q 007189 82 GMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQ 161 (613)
Q Consensus 82 Giyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~L~Y~GQ 161 (613)
|+|||++|||+||+|+||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||
T Consensus 238 Giyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQ 317 (785)
T PLN00148 238 GLYNIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQ 317 (785)
T ss_pred HHHHHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCcccCcccccccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCceeEEecCCccCCceecchh
Q 007189 162 AAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDI 241 (613)
Q Consensus 162 ~A~l~~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~v 241 (613)
||||++||++.+||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|
T Consensus 318 aA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~v 397 (785)
T PLN00148 318 AAFLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEI 397 (785)
T ss_pred HHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 007189 242 NWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQG 321 (613)
Q Consensus 242 Nw~Lm~~~l~v~~~F~~s~~l~~AYGiaV~~~m~iTT~l~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~G 321 (613)
||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.||+||
T Consensus 398 Nw~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~G 477 (785)
T PLN00148 398 NWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQG 477 (785)
T ss_pred HHHHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhhCCccc
Q 007189 322 GWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIH 401 (613)
Q Consensus 322 GW~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lH 401 (613)
||+||++|++++++|++||||+++++++|.+|++|++++.++.++.+++||||+|+|||++.+|+|++|.||++|||++|
T Consensus 478 GW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lH 557 (785)
T PLN00148 478 GWVPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFH 557 (785)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCccc
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred eEEEEEEEEEeeecccCCCceEEEEEecCCCCcEEEEEEEeeecccCCChHHHHHHHHHHHHHHHHhhhhhcC------C
Q 007189 402 SVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEG------C 475 (613)
Q Consensus 402 evvVfv~I~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvRYGY~D~~~~~~~f~~~lv~~L~~FI~~e~~~~~------~ 475 (613)
|++||||||++|+|+||++||++++|+++++|++|||++||||||++++++|||++|+++|++|||+|+.+.+ .
T Consensus 558 e~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~ 637 (785)
T PLN00148 558 KVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESS 637 (785)
T ss_pred ceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhcccccccccc
Confidence 9999999999999999999999999999999999999999999999988999999999999999999985421 1
Q ss_pred CCCCCcccccccccccccc-c--cC------CCCCCCCCCccc---cccccCC-CCCCCCCccccccccCcccCCCCchH
Q 007189 476 SDSDEYSLYGQQTLQSTDG-L--LN------NNGNSTSSNQDL---TMSSVDS-IVPVKSPLHVNSTVMSSSQMSSHTET 542 (613)
Q Consensus 476 ~~~~~~~~~~~~~~~~~~~-~--~~------~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~f~~~~~~~~~~~~~~v~ 542 (613)
+++++++..+.+++..... . ++ +..++..+...+ +..+.++ ...++++++|+... +.+. +++++
T Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~ 714 (785)
T PLN00148 638 SNDGRMAVISTRDVQSSSLLMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPE-NPGM--DPSVR 714 (785)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeecccc-cccc--cchHH
Confidence 1122333333211100000 0 00 000000000000 1111111 12345678886222 2222 57899
Q ss_pred HHHHHHHhhHhcCcEEEeeccEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 007189 543 DELEFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 613 (613)
Q Consensus 543 ~El~~L~~AkeaGVvYIlG~~~vkakk~Ss~lKKivIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvyev 613 (613)
||+++|++|||+||+||+||++|||||+|+|+||++||++|+|||||||+|.+.|+|||+|||||||+|||
T Consensus 715 ~El~~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 715 EELMDLIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred HHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999997
No 2
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=2.6e-210 Score=1745.89 Aligned_cols=602 Identities=49% Similarity=0.901 Sum_probs=546.5
Q ss_pred eeeeehhhhhcCccccchhHHHHhhhcccccCCCCCCceeehhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHh
Q 007189 2 LVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGI 81 (613)
Q Consensus 2 l~l~G~~m~~gDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~ 81 (613)
++++|+||+||||+|||||||||||||||++.|++++++||+|||+||++||++||+||+|||++|||||++||++|+++
T Consensus 235 l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPImllWFl~i~~i 314 (852)
T PLN00151 235 LVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPALALWFCSLGGI 314 (852)
T ss_pred HHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999889999999999999999999999999999999999999999999
Q ss_pred hhhhccccCcceeEecChHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccceeeehhhhHhhHHHhhhccc
Q 007189 82 GMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQ 161 (613)
Q Consensus 82 Giyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~L~Y~GQ 161 (613)
|+|||++|||+||+||||+|+++||+|||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+||
T Consensus 315 GiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~P~LlL~Y~GQ 394 (852)
T PLN00151 315 GIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVLPCLLLAYMGQ 394 (852)
T ss_pred HHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHHHHHHHHHcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCcccCcccccccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCceeEEecCCccCCceecchh
Q 007189 162 AAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDI 241 (613)
Q Consensus 162 ~A~l~~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~v 241 (613)
||||++||++++||||+++|+|++||+|++||+||||||||||||+||+++||++||||||+||+|||++++||||||+|
T Consensus 395 aA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~~~GQIYIP~v 474 (852)
T PLN00151 395 AAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRKFMGQIYIPVI 474 (852)
T ss_pred HHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 007189 242 NWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQG 321 (613)
Q Consensus 242 Nw~Lm~~~l~v~~~F~~s~~l~~AYGiaV~~~m~iTT~l~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~G 321 (613)
||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.||+||
T Consensus 475 Nw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sA~l~Ki~~G 554 (852)
T PLN00151 475 NWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFFSSVLSSVGDG 554 (852)
T ss_pred HHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhhCCccc
Q 007189 322 GWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIH 401 (613)
Q Consensus 322 GW~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lH 401 (613)
||+||++|++++++|++||||++++|+++.+|++|++++.++.++.+++||||+|+|||++.+|+|++|.||++|||++|
T Consensus 555 GW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~h~i~~~~alH 634 (852)
T PLN00151 555 GWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFGHFLTTLPAIH 634 (852)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEEEeeecccCCCceEEEEEecCCCCcEEEEEEEeeecccCC-ChHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 007189 402 SVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHK-KDENFEKKLFDSLFLFVRLEAMMEGCSDSDE 480 (613)
Q Consensus 402 evvVfv~I~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvRYGY~D~~~-~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~ 480 (613)
|++||||||++|+|+||++|||+++|++++++++|||++||||||.++ ++++||++|+++|++|||+|+.+...+++++
T Consensus 635 e~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~~~~~~~~~~~ 714 (852)
T PLN00151 635 STIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREAQERALESDGN 714 (852)
T ss_pred ceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhhhhcccccccc
Confidence 999999999999999999999999999999999999999999999976 7899999999999999999985432111110
Q ss_pred ccc-ccccccccccc-ccCCCCCC--C-----CCC---ccc---cccccCCCCCCCCCccccccccCcccCCCCchHHHH
Q 007189 481 YSL-YGQQTLQSTDG-LLNNNGNS--T-----SSN---QDL---TMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDEL 545 (613)
Q Consensus 481 ~~~-~~~~~~~~~~~-~~~~~~~~--~-----~~~---~~~---~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~~El 545 (613)
.+. +++++..+... .++..... . ... ... ...+.++ ...++++|. +. +++++||+
T Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~--~~~~~~El 784 (852)
T PLN00151 715 DDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSP--VLPSSSMSS------DE--DQSLEYEL 784 (852)
T ss_pred ccccccccccccccccCCCcccccccccccccccccccccccccccccccc--ccccccccc------cc--CccHHHHH
Confidence 000 11000000000 00000000 0 000 000 0000000 001223331 11 57899999
Q ss_pred HHHHhhHhcCcEEEeeccEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 007189 546 EFLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 613 (613)
Q Consensus 546 ~~L~~AkeaGVvYIlG~~~vkakk~Ss~lKKivIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvyev 613 (613)
++|++|||+||+||+||++|||||+|+|+||++|||+|+|||||||+|.++|+|||+||+||||+|||
T Consensus 785 ~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 785 SFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999997
No 3
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=1e-209 Score=1743.98 Aligned_cols=609 Identities=49% Similarity=0.900 Sum_probs=549.7
Q ss_pred CeeeeehhhhhcCccccchhHHHHhhhcccccCCCCCCcee-ehhHHHHHHHHHhhccccccccccchhhHHHHHHHHHH
Q 007189 1 MLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVV-VLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIG 79 (613)
Q Consensus 1 ~l~l~G~~m~~gDGvlTPAiSVLSAveGl~v~~p~~~~~~v-v~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~ 79 (613)
++|++|+||+||||+|||||||||||||||++.|+..++++ |+|||+||++||++||+||+|||++|||||++||++||
T Consensus 157 ~l~l~G~~m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~ 236 (779)
T PLN00149 157 VLALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCIS 236 (779)
T ss_pred HHHHHHHHHHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHH
Confidence 36899999999999999999999999999999976445455 89999999999999999999999999999999999999
Q ss_pred HhhhhhccccCcceeEecChHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccceeeehhhhHhhHHHhhhc
Q 007189 80 GIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYS 159 (613)
Q Consensus 80 ~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~L~Y~ 159 (613)
++|+|||++|||+||+|+||+|+++||+|||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+
T Consensus 237 ~iGiyni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~ 316 (779)
T PLN00149 237 AIGVYNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYM 316 (779)
T ss_pred HHHHHHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhcccCC---cccCcccccccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCceeEEecCCccCCce
Q 007189 160 GQAAYLMNHQD---HVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQI 236 (613)
Q Consensus 160 GQ~A~l~~~p~---~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQI 236 (613)
||||||++||+ +++||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++++|||
T Consensus 317 GQaA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQI 396 (779)
T PLN00149 317 GQAAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQI 396 (779)
T ss_pred hHHHHHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCce
Confidence 99999999996 566799999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecchhhHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhc
Q 007189 237 YIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLF 316 (613)
Q Consensus 237 YiP~vNw~Lm~~~l~v~~~F~~s~~l~~AYGiaV~~~m~iTT~l~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~ 316 (613)
|||+|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.
T Consensus 397 YIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~ 476 (779)
T PLN00149 397 YIPEINWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLI 476 (779)
T ss_pred eeHHHHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhh
Q 007189 317 KVDQGGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITN 396 (613)
Q Consensus 317 K~~~GGW~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~ 396 (613)
||+||||+|+++|++++++|++||||++++|++|.+|++|++++.++.++.++.|+||+|+|||++.+|+|++|.||++|
T Consensus 477 Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~ 556 (779)
T PLN00149 477 KFLEGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTN 556 (779)
T ss_pred hhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred CCccceEEEEEEEEEeeecccCCCceEEEEEecCCCCcEEEEEEEeeecccCCChHHHHHHHHHHHHHHHHhhhhhcCCC
Q 007189 397 LPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCS 476 (613)
Q Consensus 397 ~~~lHevvVfv~I~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvRYGY~D~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~ 476 (613)
||++||++||||+|++|+|+||++||++++|++++++++|||++||||||..++++|||++|+++|++|||+|+.+...+
T Consensus 557 ~~~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~ 636 (779)
T PLN00149 557 LPAFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGA 636 (779)
T ss_pred CCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccc
Confidence 99999999999999999999999999999999999999999999999999999899999999999999999997532211
Q ss_pred ------CCCCccccccccccccccc--cCCCCCCCCCC--ccccccccCCCCCCCCCccccccccCcccCCCCchHHHHH
Q 007189 477 ------DSDEYSLYGQQTLQSTDGL--LNNNGNSTSSN--QDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELE 546 (613)
Q Consensus 477 ------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~~El~ 546 (613)
++++++..++.+. +.... .++..++..+. ...+..++......+|+++|+... +.+. +++++||++
T Consensus 637 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~v~eEl~ 712 (779)
T PLN00149 637 PENEEGEDERMTVVGTCST-HLEGIQLREDDSDKQEPAGTSELREIRSPPVSRPKKRVRFVVPE-SPKI--DRGAREELQ 712 (779)
T ss_pred ccccccccccccccccccc-cccccccccccccccccccccccccccCccccCcccceeecccc-cccc--chhHHHHHH
Confidence 1233333332111 00000 00000000000 000000010111234677886222 2222 578999999
Q ss_pred HHHhhHhcCcEEEeeccEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 007189 547 FLNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 613 (613)
Q Consensus 547 ~L~~AkeaGVvYIlG~~~vkakk~Ss~lKKivIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvyev 613 (613)
+|++|||+||+||+||++|||||+|+|+||++|||+|+|||||||+|.+.|+|||+||+||||+|||
T Consensus 713 ~L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 713 ELMEAREAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HHHHHHHcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999999999997
No 4
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=1.1e-209 Score=1741.16 Aligned_cols=601 Identities=58% Similarity=1.026 Sum_probs=549.0
Q ss_pred CeeeeehhhhhcCccccchhHHHHhhhcccccCCCCCCceeehhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHH
Q 007189 1 MLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGG 80 (613)
Q Consensus 1 ~l~l~G~~m~~gDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~ 80 (613)
++|++|+||+||||+|||||||||||||||+..|++++++||+|||+||++||++||+||+|||++|||||++||++|++
T Consensus 174 ~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgPIm~~Wf~~i~~ 253 (779)
T PLN00150 174 LIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAPIFLCWFFSLAL 253 (779)
T ss_pred HHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhccHHHHHHHHHHH
Confidence 36899999999999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred hhhhhccccCcceeEecChHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccceeeehhhhHhhHHHhhhcc
Q 007189 81 IGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSG 160 (613)
Q Consensus 81 ~Giyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~L~Y~G 160 (613)
+|+|||++|||+||+|+||+|+++||++||++||.+||||+||+||+|||||||||||++|||+||+++|||||+|||+|
T Consensus 254 iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~LlL~Y~G 333 (779)
T PLN00150 254 IGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSLVYPCLLLTYLG 333 (779)
T ss_pred HHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhhHHHHHHHHHcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcccCCcccCcccccccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCceeEEecCCccCCceecch
Q 007189 161 QAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPD 240 (613)
Q Consensus 161 Q~A~l~~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~ 240 (613)
|||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+
T Consensus 334 QaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS~~~~GQIYIP~ 413 (779)
T PLN00150 334 QAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTSNKVHGQVYIPE 413 (779)
T ss_pred hHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceeeHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 007189 241 INWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQ 320 (613)
Q Consensus 241 vNw~Lm~~~l~v~~~F~~s~~l~~AYGiaV~~~m~iTT~l~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~ 320 (613)
|||+||++|+++|++||||++||||||+||++||++||||+++||+.+||||++++++|+++|+++|++|||||+.||+|
T Consensus 414 vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki~~ 493 (779)
T PLN00150 414 INWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGIYFSAVLFKVTQ 493 (779)
T ss_pred HHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhhCCcc
Q 007189 321 GGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAI 400 (613)
Q Consensus 321 GGW~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~l 400 (613)
|||+||++|++++++|++||||++++++++.+|++|++++.++.++.++.|+||+|+|||++++|+|++|.||++|||++
T Consensus 494 GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~v~~~~~l 573 (779)
T PLN00150 494 GGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPLFSHFITNLPAI 573 (779)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHHHHHHHHhCCcc
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999999
Q ss_pred ceEEEEEEEEEeeecccCCCceEEEEEecCCCCcEEEEEEEeeecccCCChHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 007189 401 HSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDE 480 (613)
Q Consensus 401 HevvVfv~I~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvRYGY~D~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~ 480 (613)
||++||+|||++|+|+||++||++++|+++++|++|||++||||||++++++|||++|+|+|++|||+|+.+...+++ +
T Consensus 574 he~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~e~~~~~~~~~-~ 652 (779)
T PLN00150 574 HSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIESFREQSDLE-S 652 (779)
T ss_pred cceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHhhhhccccccc-c
Confidence 999999999999999999999999999999989999999999999999989999999999999999999754322221 2
Q ss_pred ccccccccccccccccCC-CC--CCCC--CCccccccccCCCCCCCCCccccccccCcccCCCCchHHHHHHHHhhHhcC
Q 007189 481 YSLYGQQTLQSTDGLLNN-NG--NSTS--SNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAG 555 (613)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~-~~--~~~~--~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~~El~~L~~AkeaG 555 (613)
++..+++++...+ .++. .. +... .....+..+.+. +.+++.+|. +. +++++||+++|++|||+|
T Consensus 653 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~------~~--~~~v~eEl~~L~~A~eaG 721 (779)
T PLN00150 653 MAASWTPEELMGE-GNSVGSGLFTQYDQSDINFATSQEWKR--PSSQEDSVS------GH--SSDTQDEVAFLNKCKEAG 721 (779)
T ss_pred ccccccccccccc-CCccccccccccccccccccccccccc--ccccccccc------cc--cccHHHHHHHHHHHHHcC
Confidence 2222211100000 0000 00 0000 000000001111 111233331 11 578999999999999999
Q ss_pred cEEEeeccEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 007189 556 VVHILGNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 613 (613)
Q Consensus 556 VvYIlG~~~vkakk~Ss~lKKivIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvyev 613 (613)
|+||+||++|||||+|+|+||++||++|+|||||||+|.+.|+|||+||+||||+|||
T Consensus 722 VvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 722 VVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred cEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=2.2e-190 Score=1578.68 Aligned_cols=559 Identities=43% Similarity=0.791 Sum_probs=532.4
Q ss_pred eeeeehhhhhcCccccchhHHHHhhhcccccCCCCCCceeehhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHh
Q 007189 2 LVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGI 81 (613)
Q Consensus 2 l~l~G~~m~~gDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~ 81 (613)
+|++|+||++|||+|||||||||||||||++.|++++++|+||||+||++||++||+||+|||++|||||++||++||++
T Consensus 129 ~~l~G~al~~gDgviTPAiSVLSAVeGl~v~~p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~ 208 (688)
T TIGR00794 129 FGLLGGSMVMGDGVLTPAISVLSAVSGLEIVAPSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGI 208 (688)
T ss_pred HHHHhHHHHhcccccccchhhhhhhccccccCCCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred hhhhccccCcceeEecChHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccceeeehhhhHhhHHHhhhccc
Q 007189 82 GMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQ 161 (613)
Q Consensus 82 Giyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~L~Y~GQ 161 (613)
|+|||++|||+||+|+||+|+++||.+||..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||
T Consensus 209 Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQ 288 (688)
T TIGR00794 209 GIYNIVKFNPEVLKALSPYYAVQFFIEYGTVGWVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQ 288 (688)
T ss_pred HHHHHHhcCHHHHhHhCHHHHHHHHHHCCCceeeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCcccCcccccccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCceeEEecCCccCCceecchh
Q 007189 162 AAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDI 241 (613)
Q Consensus 162 ~A~l~~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~v 241 (613)
||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|
T Consensus 289 gA~ll~~p~~~~NpFf~~~P~~~~~p~~vlAtlAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~v 368 (688)
T TIGR00794 289 AAYLSKHPEAIKNPFFLSIPDWALWPLFIIATLAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFV 368 (688)
T ss_pred HHHHhcCcchhcCcHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 007189 242 NWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQG 321 (613)
Q Consensus 242 Nw~Lm~~~l~v~~~F~~s~~l~~AYGiaV~~~m~iTT~l~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~G 321 (613)
||+||++|+++|++||||++||+|||+||++||++||+|++++|+.+||||++++++|+++|+.+|+.|||||+.|++||
T Consensus 369 Nw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~G 448 (688)
T TIGR00794 369 NWLLMLGVIAVTAGFRDTNNLGAAYGIAVTGTFLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEG 448 (688)
T ss_pred HHHHHHHHHheeEEecChHHHHHHhhhhhhhhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcC-CCCCCCccCceEEEEecCCCCchhhHHHHhhhCCcc
Q 007189 322 GWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLG-PSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAI 400 (613)
Q Consensus 322 GW~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~l 400 (613)
||+|+++|++++++|++|+||++++++++.++++|++++++.+ ++.+++|+||+|+|||++++++|++|.||++|||++
T Consensus 449 GW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~l 528 (688)
T TIGR00794 449 GWFPLSLSGIFMSVMTTWRYGRFRKLRRDHEHRVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSI 528 (688)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCcc
Confidence 9999999999999999999999999999999999999998844 445568999999999999999999999999999999
Q ss_pred ceEEEEEEEEEeeecccCCCceEEEEEecCCCCcEEEEEEEeeecccCCChHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 007189 401 HSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDE 480 (613)
Q Consensus 401 HevvVfv~I~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvRYGY~D~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~ 480 (613)
||++||+||+++|+|+||++||++++++++++ |+|||++||||||++|+|++|+++++++|++||+++..+...+
T Consensus 529 he~~vfltv~~~~~P~Vp~~eR~~v~~l~~~~-g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~~~~~---- 603 (688)
T TIGR00794 529 HEVFIFLSLRTLDAPTVHNEERVQISQVGPTE-GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGFNLNN---- 603 (688)
T ss_pred ceEEEEEEEEECCCCcCCcceEEEEEEEcCCC-CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhhcccc----
Confidence 99999999999999999999999999999754 8999999999999999999999999999999999865311000
Q ss_pred ccccccccccccccccCCCCCCCCCCccccccccCCCCCCCCCccccccccCcccCCCCchHHHHHHHHhhHhcCcEEEe
Q 007189 481 YSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHIL 560 (613)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~~El~~L~~AkeaGVvYIl 560 (613)
+ .. . . ++ +. +.+.+||++++++++|+||+|++
T Consensus 604 -----~---~~---~----------------~-~~----------------~~----~~~~eee~~~~~~~~~~gv~yfl 635 (688)
T TIGR00794 604 -----L---EE---L----------------S-DK----------------RC----RMPIEEIFENAMETKEHGYSYFM 635 (688)
T ss_pred -----c---cc---c----------------c-cc----------------cc----ccchHHHHHHHHHHhhcCCEEEe
Confidence 0 00 0 0 00 00 12357899999999999999999
Q ss_pred eccEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 007189 561 GNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 613 (613)
Q Consensus 561 G~~~vkakk~Ss~lKKivIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvyev 613 (613)
||++++++++|+++||+.||++|.|||||||++...++|||+|++||||.||+
T Consensus 636 g~~~~~~~~~~~~~~~~~I~~lf~~l~rn~~~~~~~~~iP~~rvvevG~~~~i 688 (688)
T TIGR00794 636 GEESLILKKRSPILRKIRVNHVFLFIRRNARRAPKVLEIPPDRLLEVGTVVEI 688 (688)
T ss_pred eceEEEECCCccHHHHHHHHHHHHHHHHhccChhhheeCChhhEEEEeeEEEC
Confidence 99999999999999999999999999999999999999999999999999996
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=4.2e-174 Score=1429.45 Aligned_cols=515 Identities=29% Similarity=0.535 Sum_probs=492.3
Q ss_pred eeeeehhhhhcCccccchhHHHHhhhcccccCCCCCCceeehhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHh
Q 007189 2 LVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGI 81 (613)
Q Consensus 2 l~l~G~~m~~gDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~ 81 (613)
+|++|+||++|||+|||||||||||||||+..|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++
T Consensus 105 lgl~Gaal~~gDgvITPAISVLSAVEGL~v~~p~l~-~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~ 183 (622)
T PRK10745 105 MGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLD-TYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVL 183 (622)
T ss_pred HHHHHHHHHhhccccchhHHHHHHhhcccccCCCCC-CccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHH
Confidence 689999999999999999999999999999999995 5899999999999999999999999999999999999999999
Q ss_pred hhhhccccCcceeEecChHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccceeeehhhhHhhHHHhhhccc
Q 007189 82 GMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQ 161 (613)
Q Consensus 82 Giyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~L~Y~GQ 161 (613)
|+|||++ ||+||+|+||+|+++||.+||..||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||
T Consensus 184 Gi~~I~~-~P~Vl~AlnP~ya~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQ 262 (622)
T PRK10745 184 GLRSIIA-NPEVLHALNPMWAVHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQ 262 (622)
T ss_pred HHHHHhc-CHHHHhHhCHHHHHHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcch
Confidence 9999997 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCcccCcccccccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCceeEEecCCccCCceecchh
Q 007189 162 AAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDI 241 (613)
Q Consensus 162 ~A~l~~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~v 241 (613)
||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|
T Consensus 263 gA~ll~~p~~~~NpFf~~~P~~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~v 342 (622)
T PRK10745 263 GALLLKNPEAIKNPFFLLAPDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFV 342 (622)
T ss_pred HHHHhcCchhhcCcHHHhCChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 007189 242 NWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQG 321 (613)
Q Consensus 242 Nw~Lm~~~l~v~~~F~~s~~l~~AYGiaV~~~m~iTT~l~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~G 321 (613)
||+||++|++++++||||++||+|||+||++||++||+|++++++.+|||+++++++++++|+.+|+.||+||+.|++||
T Consensus 343 Nw~Lmv~~i~~vl~F~sS~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~G 422 (622)
T PRK10745 343 NWLLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSG 422 (622)
T ss_pred HHHHHHHHHeeEEEecCchHHHHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhhCCccc
Q 007189 322 GWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIH 401 (613)
Q Consensus 322 GW~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lH 401 (613)
||+|+++|++++++|++|++|++++++++.+++++++++++.+++.++.|+||+|+|+|+..+++|+++.||+||||++|
T Consensus 423 GW~pl~ia~v~~~iM~tW~~G~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lh 502 (622)
T PRK10745 423 GWLPLSLGLVMFIVMTTWKSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLH 502 (622)
T ss_pred ChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccc
Confidence 99999999999999999999999999999999999999999988777789999999999999999999999999999999
Q ss_pred eEEEEEEEEEeeecccCCCceEEEEEecCCCCcEEEEEEEeeecccCCChHHHHHHHHHHHHHHHHhhhhhcCCCCCCCc
Q 007189 402 SVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDEY 481 (613)
Q Consensus 402 evvVfv~I~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvRYGY~D~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~~ 481 (613)
|++||+||+++|+|+||++||++++++++ ++|||++||||||++|.|+.+++. +.+.
T Consensus 503 e~~v~l~v~~~~~P~V~~~eR~~v~~l~~---g~~rv~~~yGf~e~~~i~~~L~~~---------~~~g----------- 559 (622)
T PRK10745 503 ERVILLTLRTEDAPYVHNVRRVQIEQLSP---TFWRVVASYGWRETPNVEEVFHRC---------GLEG----------- 559 (622)
T ss_pred eEEEEEEEEECCCcccCcccEEEEEEECC---CEEEEEEEecCCCCCCHHHHHHHH---------HhCC-----------
Confidence 99999999999999999999999999996 799999999999999998776531 0000
Q ss_pred cccccccccccccccCCCCCCCCCCccccccccCCCCCCCCCccccccccCcccCCCCchHHHHHHHHhhHhcCcEEEee
Q 007189 482 SLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHILG 561 (613)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~~El~~L~~AkeaGVvYIlG 561 (613)
.+++ + ..++|.+|
T Consensus 560 ------------------------------------------~~~~--~-----------------------~~~s~fl~ 572 (622)
T PRK10745 560 ------------------------------------------LSCR--M-----------------------METSFFMS 572 (622)
T ss_pred ------------------------------------------CCCC--c-----------------------cceEEEEe
Confidence 0000 1 16799999
Q ss_pred ccEEEecCCCc---hHHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 007189 562 NTVVRASRGSK---FYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 613 (613)
Q Consensus 562 ~~~vkakk~Ss---~lKKivIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvyev 613 (613)
|++++..++++ |-|| +|.||.||++++...+++|++|++|+|+.+|+
T Consensus 573 r~~l~~~~~~~m~~wr~~-----lF~~m~rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 573 HESLILGKRPWYLRLRGK-----LFLLLQRNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred eEEEEeCCCCCcHHHHHH-----HHHHHHHcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 99999888887 4444 68999999999999999999999999999986
No 7
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=2.9e-164 Score=1341.37 Aligned_cols=441 Identities=46% Similarity=0.816 Sum_probs=436.8
Q ss_pred eeeeehhhhhcCccccchhHHHHhhhcccccCCCCCCceeehhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHh
Q 007189 2 LVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGI 81 (613)
Q Consensus 2 l~l~G~~m~~gDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~ 81 (613)
+|++|+||++|||+||||||||||||||++..|+++ ++|+||||+||++||++||+||+|||++|||||++||++||++
T Consensus 94 l~l~G~al~~gDgviTPAISVlSAvEGl~v~~p~~~-~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~ 172 (534)
T PF02705_consen 94 LGLLGAALFYGDGVITPAISVLSAVEGLEVATPSLE-PYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVL 172 (534)
T ss_pred HHHHHhhhhhcceeecchHHHHHHhhhhhccCCCCc-ceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999997 6999999999999999999999999999999999999999999
Q ss_pred hhhhccccCcceeEecChHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccceeeehhhhHhhHHHhhhccc
Q 007189 82 GMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSGQ 161 (613)
Q Consensus 82 Giyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~L~Y~GQ 161 (613)
|+|||++ ||+||+|+||+|+++||.+||+.||.+||+|+||+||+||||||||||||+|||+||+++|||||+|||+||
T Consensus 173 G~~~I~~-~p~Vl~A~nP~yai~f~~~~~~~~~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQ 251 (534)
T PF02705_consen 173 GLYNIIQ-HPEVLKALNPYYAIRFFIRNGWIGFFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQ 251 (534)
T ss_pred HHHHHhh-CHHHHHHhCHHHHHHHHHHcCCchhhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccH
Confidence 9999999 599999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcccCCcccCcccccccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCceeEEecCCccCCceecchh
Q 007189 162 AAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPDI 241 (613)
Q Consensus 162 ~A~l~~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~v 241 (613)
||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|
T Consensus 252 gA~ll~~p~~~~npFf~~~P~~~~~p~~ilAtlAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~v 331 (534)
T PF02705_consen 252 GALLLSHPEAVSNPFFLLIPEWLLWPMVILATLATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEV 331 (534)
T ss_pred HHHHHcCcchhhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhccccCC
Q 007189 242 NWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQG 321 (613)
Q Consensus 242 Nw~Lm~~~l~v~~~F~~s~~l~~AYGiaV~~~m~iTT~l~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~G 321 (613)
||+||++|++++++||||++|++|||+||++||++||+|++++++.+||||++++++++++|+.+|+.||+||+.|++||
T Consensus 332 Nw~L~i~~i~vvl~F~~S~~la~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~G 411 (534)
T PF02705_consen 332 NWLLMIGVIAVVLGFRSSSNLAAAYGIAVTGTMLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHG 411 (534)
T ss_pred HHHHHHHHHhhheEECChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhhCCccc
Q 007189 322 GWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAIH 401 (613)
Q Consensus 322 GW~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~lH 401 (613)
||+|+++|++++++|++|+||+++++++++++++++++++++.++.++.|+||+|+|+|+..+++|+.+.|+++||+++|
T Consensus 412 GW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlh 491 (534)
T PF02705_consen 412 GWFPLLIAAVLFTIMYTWRRGRKLLYEFERENKLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLH 491 (534)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEEEeeecccCCCceEEEEEecCCCCcEEEEEEEeeecc
Q 007189 402 SVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKD 446 (613)
Q Consensus 402 evvVfv~I~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvRYGY~D 446 (613)
|+++|++++++|+|+||++||++++++++ +++|||++||||||
T Consensus 492 e~~v~l~v~~~~vP~V~~~~R~~v~~l~~--~g~~rv~~ryGf~e 534 (534)
T PF02705_consen 492 ERVVFLTVKTEPVPRVPPEERYEVERLGP--DGFYRVTLRYGFME 534 (534)
T ss_pred ceEEEEEEEEeccCCCCCceEEEEEEecC--CCEEEEEEEecCCC
Confidence 99999999999999999999999999996 38999999999998
No 8
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-159 Score=1284.45 Aligned_cols=519 Identities=33% Similarity=0.608 Sum_probs=496.2
Q ss_pred CeeeeehhhhhcCccccchhHHHHhhhcccccCCCCCCceeehhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHH
Q 007189 1 MLVLVGTCMVIGDGILTPAISVLSASGGIKVDHPHMSNGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGG 80 (613)
Q Consensus 1 ~l~l~G~~m~~gDGvlTPAiSVLSAveGl~v~~p~~~~~~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~ 80 (613)
++|++|+|+++|||+||||||||||||||+++.|.++ ++|+|||++||++||++||+||++||.+|||||++||+++|.
T Consensus 109 ~~g~iGaalf~GD~vITPAiSVlSAvEGL~iv~p~~~-~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~ 187 (627)
T COG3158 109 ILGLIGAALFYGDAVITPAISVLSAVEGLEIVTPALD-PYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAV 187 (627)
T ss_pred hHHHHhHHHHhcccccchhHHHHHHhccccccCcccc-CccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHH
Confidence 4689999999999999999999999999999999996 699999999999999999999999999999999999999999
Q ss_pred hhhhhccccCcceeEecChHHHHHHHHhcCcceeeeecceeeeecchhhhhccCCCCCccceeeehhhhHhhHHHhhhcc
Q 007189 81 IGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSG 160 (613)
Q Consensus 81 ~Giyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~L~Y~G 160 (613)
+|++||.. ||+||+|+||+||++|+.++|..|++.||+|+||+||+||||||||||||+|||.||+++|+|||+|||+|
T Consensus 188 ~Gl~~i~~-~p~IL~AiNP~yAi~fl~~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~G 266 (627)
T COG3158 188 LGLINIID-DPEILRAINPYYAVHFLLEEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFG 266 (627)
T ss_pred HHHHHHhc-CHHHHHHhChHHHHHHHHhCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHcc
Confidence 99999998 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhcccCCcccCcccccccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCceeEEecCCccCCceecch
Q 007189 161 QAAYLMNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTSKKFLGQIYIPD 240 (613)
Q Consensus 161 Q~A~l~~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS~~~~GQIYiP~ 240 (613)
|||++++||++..||||.++|+|++||+++|||+||||||||+|||+||++|||++||++||+||.|||+++.||||||.
T Consensus 267 QGA~vL~~p~a~~npFF~~~P~~aliP~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~ 346 (627)
T COG3158 267 QGALLLSNPEAIGNPFFLLAPDWALIPLVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPA 346 (627)
T ss_pred ccceeccCcccccCcHHHhChhhHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhccccC
Q 007189 241 INWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSLVVECTYFSAVLFKVDQ 320 (613)
Q Consensus 241 vNw~Lm~~~l~v~~~F~~s~~l~~AYGiaV~~~m~iTT~l~~~v~~~~w~~~~~~~~~~~~~f~~ie~~f~sa~l~K~~~ 320 (613)
|||+|+++++.++++||+|++||+|||+|||++|+|||+|++++++..|||+.+.+.++.++|+++|..||+||+.|++|
T Consensus 347 VN~~L~~~V~~~vl~F~~S~~LAaAYGiAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~ 426 (627)
T COG3158 347 VNWLLLVAVVFVVLGFGSSSNLAAAYGIAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHD 426 (627)
T ss_pred HHHHHHHHHhheeeEecChHHHHHhhChheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCChHHHHhcCCCCCCCccCceEEEEecCCCCchhhHHHHhhhCCcc
Q 007189 321 GGWVPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELASGVPHIFSHFITNLPAI 400 (613)
Q Consensus 321 GGW~pl~ia~~~~~im~~W~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~~vf~t~~~~~vP~~~~h~~~~~~~l 400 (613)
|||+|+++|++++++|+||++|+++.+++.+++++|+|.+++.+++..+.|+||+++|+|+..+.+|.++.|++|||+++
T Consensus 427 GGw~pllia~~i~~vM~tW~~g~~~l~~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvl 506 (627)
T COG3158 427 GGWLPLLLAAVIFFVMWTWKRGRQILFEKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVL 506 (627)
T ss_pred CCChHHHHHHHHHHHHHHhhhhhHHHHHHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEEEEeeecccCCCceEEEEEecCCCCcEEEEEEEeeecccCCChHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Q 007189 401 HSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHMFRCVARYGYKDLHKKDENFEKKLFDSLFLFVRLEAMMEGCSDSDE 480 (613)
Q Consensus 401 HevvVfv~I~~~~vP~V~~~eR~~v~~~~~~~~~~yR~vvRYGY~D~~~~~~~f~~~lv~~L~~FI~~e~~~~~~~~~~~ 480 (613)
||++||+++++.++|+|+++||+.++++++ +++|+.++|||||+||+|+.+... +++.
T Consensus 507 he~nv~ltv~t~~~P~v~~~~r~~ve~l~~---~f~rV~l~~Gfme~pnvp~~l~~~---------~~~G---------- 564 (627)
T COG3158 507 HERNVFLTVRTEDVPYVHPTDRVKVEQLSD---DFVRVVLHFGFMETPNVPRALRLC---------RKKG---------- 564 (627)
T ss_pred eeeEEEEEEEecCCCCCCccceeeeeeccC---ceEEEEEEeeccCCCCHHHHHHHH---------hhcC----------
Confidence 999999999999999999999999999998 699999999999999998766441 1110
Q ss_pred ccccccccccccccccCCCCCCCCCCccccccccCCCCCCCCCccccccccCcccCCCCchHHHHHHHHhhHhcCcEEEe
Q 007189 481 YSLYGQQTLQSTDGLLNNNGNSTSSNQDLTMSSVDSIVPVKSPLHVNSTVMSSSQMSSHTETDELEFLNSCRDAGVVHIL 560 (613)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~v~~El~~L~~AkeaGVvYIl 560 (613)
.+|+ .| ...|.+
T Consensus 565 -------------------------------------------~~f~--im-----------------------~tsFfl 576 (627)
T COG3158 565 -------------------------------------------LKFD--IM-----------------------ETSFFL 576 (627)
T ss_pred -------------------------------------------ceec--cc-----------------------ceEEEE
Confidence 0111 11 357999
Q ss_pred eccEEEecCCCchHHHHHHHHHHHHHHhhccCCCcccccCCCCeEeeeeEEEC
Q 007189 561 GNTVVRASRGSKFYKKIAIDYIYAFLRKICRENSVIFNVPHESLLNVGQIFYV 613 (613)
Q Consensus 561 G~~~vkakk~Ss~lKKivIn~~Y~FLRkNcR~~~~~L~IPh~~LlEVGMvyev 613 (613)
|++.++++++|++.+ +... .|.+|.||.-++...++||.+|++|+|-.-|+
T Consensus 577 ~re~l~~~~~~g~~~-w~~~-lfi~l~r~aa~~~~~F~lp~~rvvElGtqveI 627 (627)
T COG3158 577 SRESLIASKNSGMPR-WRDR-LFIALARNAASPTDYFKLPPNRVVELGTQVEI 627 (627)
T ss_pred EeeeeecCCCCCchH-HHHH-HHHHHHHhcCCHHHhhCCCCCcEEEeeeeeeC
Confidence 999999999999876 4443 78999999999999999999999999976554
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=87.35 E-value=0.92 Score=50.72 Aligned_cols=87 Identities=20% Similarity=0.169 Sum_probs=43.4
Q ss_pred eehhHHHHHHHHHhhcccccccccc---chhhHHHHHHHHHHHhhhhhccccCcceeEecChHHHHHHHHhcCcceee-e
Q 007189 41 VVLVAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWT-S 116 (613)
Q Consensus 41 vv~is~~ILv~LF~~Q~~GT~kvg~---~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~-~ 116 (613)
...+++++++++..+.-+|....+. .+.-+.++=++.+.+.|++.+.+.++. ..+|...+.-.. ++..+|. .
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~~~~~~---~~~~~~~f~~~~-~~~~~~~~a 240 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLGKGGVE---SLNPKNAFEGTE-TSAGGIVLA 240 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc---ccCcccccCCCC-CcHHHHHHH
Confidence 3467788888889999999655543 333333322333444565554331111 112221110000 1222333 3
Q ss_pred ecceeeeecchhhhh
Q 007189 117 LGGIMLSITGTEALF 131 (613)
Q Consensus 117 LG~v~L~iTG~EAly 131 (613)
+..++.+.+|-|+.=
T Consensus 241 ~~~~~~af~G~e~~~ 255 (501)
T TIGR00911 241 FYSGIWAYGGWNYLN 255 (501)
T ss_pred HHHHHHHHHhHHHHh
Confidence 566777888888653
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=76.11 E-value=21 Score=38.71 Aligned_cols=179 Identities=16% Similarity=0.128 Sum_probs=98.6
Q ss_pred eeehhHHHHHHHHHhhccccccccccchhhHHHHHHHHHHHhhhhhccccCcceeEecChHHHHHHHHhcCcceeeeecc
Q 007189 40 VVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGWTSLGG 119 (613)
Q Consensus 40 ~vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~~~LG~ 119 (613)
....++.+++++++.++-+|....+.+..-..++=+..+..+++..+...+......+++... .......-...++.
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 209 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP---GGGSFGGILAAILL 209 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc---ccchHHHHHHHHHH
Confidence 456789999999999999999888776655554444544555444444432222222221110 00000012334556
Q ss_pred eeeeecchhhh--hcc-CCCCCccceeeehhhhHhhHHHhhhccchhhhcccCC-ccc-----Ccccc---ccc-CcchH
Q 007189 120 IMLSITGTEAL--FAD-LAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNHQD-HVV-----DAFYR---SIP-DSIYW 186 (613)
Q Consensus 120 v~L~iTG~EAl--yAD-lGHF~~~~I~~aw~~~v~P~L~L~Y~GQ~A~l~~~p~-~~~-----npFy~---~~P-~~~~~ 186 (613)
++.+.+|-|+. +|+ +=+ .+|.|-.|-..-..-+.++-.+++-+....-|. +.. +|+.. ... .+..+
T Consensus 210 ~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~~ 288 (466)
T COG0531 210 AFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGAI 288 (466)
T ss_pred HHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHHH
Confidence 68888998865 332 333 555566555544433444444444443333332 111 34432 222 35555
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCc
Q 007189 187 PVFIVATAAAIVASQATISATFSIIKQALALGCFPR 222 (613)
Q Consensus 187 P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr 222 (613)
-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 289 ~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 289 IIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 666666666666667777777777777778899998
No 11
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=69.30 E-value=22 Score=39.47 Aligned_cols=26 Identities=19% Similarity=0.427 Sum_probs=18.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHhHHHH
Q 007189 321 GGWVPLVIAAAFLVIMYVWHYGTVKR 346 (613)
Q Consensus 321 GGW~pl~ia~~~~~im~~W~~G~~~~ 346 (613)
.-|.+++++.++...+..|....+|.
T Consensus 453 ~ny~~~~~~~~~~~~~~~~~~~~r~~ 478 (482)
T TIGR00907 453 MNYAVVVFAGVLAISLVYWKYKGRKE 478 (482)
T ss_pred CChHhHHHHHHHHHHHHHheEeceee
Confidence 35999999888887777776543333
No 12
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=68.96 E-value=49 Score=36.86 Aligned_cols=19 Identities=26% Similarity=0.324 Sum_probs=13.7
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q 007189 322 GWVPLVIAAAFLVIMYVWH 340 (613)
Q Consensus 322 GW~pl~ia~~~~~im~~W~ 340 (613)
-|.+++++.+++....-|-
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888777666565
No 13
>TIGR00909 2A0306 amino acid transporter.
Probab=68.90 E-value=32 Score=37.42 Aligned_cols=168 Identities=17% Similarity=0.158 Sum_probs=78.6
Q ss_pred hhHHHHHHHHHhhcccccccc---ccchhhHHHHHHHHHHHhhhhhccccCcceeEecChHHHHHHHHhcCccee-eeec
Q 007189 43 LVAVVILVGLFSLQHYGTDRV---GWLFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRYFRRGGRDGW-TSLG 118 (613)
Q Consensus 43 ~is~~ILv~LF~~Q~~GT~kv---g~~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f~~~~g~~g~-~~LG 118 (613)
.++++++++...+..+|.... ...++.+.++=++.+.+.|+.+. ++.-+..+.|. +..+| ..+.
T Consensus 135 ~~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~---------~~~~~~~~~~ 202 (429)
T TIGR00909 135 LPALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPM---------GFGGVGAATA 202 (429)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCC---------cHHHHHHHHH
Confidence 456777778888888886544 45666666554444445555433 22222222221 11121 1133
Q ss_pred ceeeeecchhhhhc--cCCCCCccceeeehhhhHhhHHHhhhccchhhhccc-C-C---cccCcccc----cccCcchHH
Q 007189 119 GIMLSITGTEALFA--DLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLMNH-Q-D---HVVDAFYR----SIPDSIYWP 187 (613)
Q Consensus 119 ~v~L~iTG~EAlyA--DlGHF~~~~I~~aw~~~v~P~L~L~Y~GQ~A~l~~~-p-~---~~~npFy~----~~P~~~~~P 187 (613)
..+.+.+|-|+.-. +-=+-.+|.+..|-..-+. ...+.|+.-....... | + +.++|+.. ...++.-+-
T Consensus 203 ~~~~af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~-~~~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (429)
T TIGR00909 203 LVFFAFIGFEAISTAAEEVKNPERDIPKAIILSLI-VVTLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLI 281 (429)
T ss_pred HHHHHHhhHHHHHhhHHhccCccccccHHHHHHHH-HHHHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHH
Confidence 35566778776643 3334455666665543222 1122244332222211 1 1 11234322 222333333
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCce
Q 007189 188 VFIVATAAAIVASQATISATFSIIKQALALGCFPRV 223 (613)
Q Consensus 188 ~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 223 (613)
+.+.+.++..-+..+.+.+.=-+....-+.|.+|+.
T Consensus 282 ~~i~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~ 317 (429)
T TIGR00909 282 LTAGAVFSIASVMLAGIYGTSRVLFAMSRDGLLPGS 317 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH
Confidence 444444444444444444444444455578999973
No 14
>PRK10655 potE putrescine transporter; Provisional
Probab=68.28 E-value=1.5e+02 Score=32.39 Aligned_cols=43 Identities=16% Similarity=0.026 Sum_probs=25.2
Q ss_pred hhHHHHHHHHHhhccccccccccc---hhhHHHHHHHHHHHhhhhh
Q 007189 43 LVAVVILVGLFSLQHYGTDRVGWL---FAPIVLLWFLLIGGIGMLN 85 (613)
Q Consensus 43 ~is~~ILv~LF~~Q~~GT~kvg~~---F~Pim~~Wf~~i~~~Giyn 85 (613)
.++.++++.+..+.-+|++..+++ ..-..++-++.+.+.|++.
T Consensus 125 ~~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 125 LATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666677888999997665543 3333344444455555543
No 15
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=56.78 E-value=1e+02 Score=32.52 Aligned_cols=52 Identities=15% Similarity=0.068 Sum_probs=37.5
Q ss_pred hhhhhchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH----HHHHHHHHhh
Q 007189 263 GNAYGTAVVIVMLATTLLMTLIMILVWRCHWILVLIFTALSL----VVECTYFSAV 314 (613)
Q Consensus 263 ~~AYGiaV~~~m~iTT~l~~~v~~~~w~~~~~~~~~~~~~f~----~ie~~f~sa~ 314 (613)
=..||.+|..+.++.++-++..+..+.+.+.+.++++.++++ .+|-..+|+.
T Consensus 15 ~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~ 70 (301)
T PF14362_consen 15 YAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSI 70 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 346888888888888888888888888877666666655554 4565555543
No 16
>PRK15049 L-asparagine permease; Provisional
Probab=56.20 E-value=61 Score=36.66 Aligned_cols=23 Identities=13% Similarity=0.094 Sum_probs=16.3
Q ss_pred hhHHHHHHHHHhhcccccccccc
Q 007189 43 LVAVVILVGLFSLQHYGTDRVGW 65 (613)
Q Consensus 43 ~is~~ILv~LF~~Q~~GT~kvg~ 65 (613)
.++.++++++..+.-+|....+.
T Consensus 146 ~~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 146 VFALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667777788888888765554
No 17
>TIGR00930 2a30 K-Cl cotransporter.
Probab=56.20 E-value=76 Score=39.31 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=21.3
Q ss_pred eehhHHHHHHHHHhhccccccccccchhhHHHHH
Q 007189 41 VVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLW 74 (613)
Q Consensus 41 vv~is~~ILv~LF~~Q~~GT~kvg~~F~Pim~~W 74 (613)
+-.++++++++++.+--+|....+ -+..++++.
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~a-k~q~vl~vi 235 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWEN-KAQVLFLVI 235 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHH-HHHHHHHHH
Confidence 445777888888888888985443 344443333
No 18
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=54.30 E-value=22 Score=38.39 Aligned_cols=87 Identities=23% Similarity=0.493 Sum_probs=52.4
Q ss_pred HHHHHHHHHhhcccccccccc--chhhHHHHHHHHHHHhhhh---------------------hccccCcceeEecChHH
Q 007189 45 AVVILVGLFSLQHYGTDRVGW--LFAPIVLLWFLLIGGIGML---------------------NIWKYDSSVLKAFSPVY 101 (613)
Q Consensus 45 s~~ILv~LF~~Q~~GT~kvg~--~F~Pim~~Wf~~i~~~Giy---------------------ni~~~~p~Vl~A~nP~y 101 (613)
+|+.+.=.|+-|| |-.++|+ +.|-+.+.|.++-...++. -++||-|...
T Consensus 213 t~Iti~Qc~~yeR-~~q~vs~~ialgil~i~~~f~~~~~~va~~~~~~wL~f~~~~syiKl~mTliKYiPQa~------- 284 (372)
T KOG3145|consen 213 TVITILQCFFYER-GWQRVSKGIALGILAIFWLFAVVFMYVAYWYVIRWLAFLNNLSYIKLAMTLIKYIPQAY------- 284 (372)
T ss_pred HHHHHHHHHhhhh-cccccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHh-------
Confidence 4444444444444 5556766 5666666665544433321 2344433321
Q ss_pred HHHHHHhcCcceeeeecceeeeecchhh-----------------hhccCCCCCccce
Q 007189 102 IYRYFRRGGRDGWTSLGGIMLSITGTEA-----------------LFADLAHFPVSAI 142 (613)
Q Consensus 102 ~~~f~~~~g~~g~~~LG~v~L~iTG~EA-----------------lyADlGHF~~~~I 142 (613)
.=+.|...+|| +.|+|+|=+|||-| .|+|+|-||-.-+
T Consensus 285 --mN~tRKSt~gw-sIgnIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~v 339 (372)
T KOG3145|consen 285 --MNFTRKSTVGW-SIGNILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLV 339 (372)
T ss_pred --hcceecccccc-ccccEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhH
Confidence 22345566787 78999999999975 6899999986543
No 19
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=50.06 E-value=16 Score=37.77 Aligned_cols=39 Identities=23% Similarity=0.574 Sum_probs=29.9
Q ss_pred HHHHhhhcccc------CCChHHHHHHHHHHHHHHHHHHhHHHHH
Q 007189 309 TYFSAVLFKVD------QGGWVPLVIAAAFLVIMYVWHYGTVKRY 347 (613)
Q Consensus 309 ~f~sa~l~K~~------~GGW~pl~ia~~~~~im~~W~~G~~~~~ 347 (613)
+|||+-..-+. +|||..++++.+...+..+|++--+.+.
T Consensus 243 VFl~~W~~~~~d~~~~i~~G~isiv~Gliiv~iLii~N~kvEv~A 287 (304)
T COG4059 243 VFLSSWVTTVFDPAVSIQGGWISIVAGLIIVLILIIWNRKVEVKA 287 (304)
T ss_pred hhhhhhhhhhcCcccccccchhhhHHHHHHHHHHHHhcchhhhhh
Confidence 44444444444 8999999999999999999999666554
No 20
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=49.68 E-value=75 Score=35.03 Aligned_cols=23 Identities=17% Similarity=0.176 Sum_probs=16.9
Q ss_pred hHHHHHHHHHhhccccccccccc
Q 007189 44 VAVVILVGLFSLQHYGTDRVGWL 66 (613)
Q Consensus 44 is~~ILv~LF~~Q~~GT~kvg~~ 66 (613)
++++++.++..+..+|+...+.+
T Consensus 124 ~~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 124 ACIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHH
Confidence 34566667888999998776654
No 21
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=49.20 E-value=76 Score=31.81 Aligned_cols=21 Identities=14% Similarity=0.377 Sum_probs=16.7
Q ss_pred CChHHHHHHHHHHHHHHHHHH
Q 007189 321 GGWVPLVIAAAFLVIMYVWHY 341 (613)
Q Consensus 321 GGW~pl~ia~~~~~im~~W~~ 341 (613)
.+|+-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999998888766653
No 22
>PRK11021 putative transporter; Provisional
Probab=45.70 E-value=3.5e+02 Score=29.41 Aligned_cols=27 Identities=22% Similarity=0.270 Sum_probs=20.8
Q ss_pred eehhHHHHHHHHHhhccccccccccch
Q 007189 41 VVLVAVVILVGLFSLQHYGTDRVGWLF 67 (613)
Q Consensus 41 vv~is~~ILv~LF~~Q~~GT~kvg~~F 67 (613)
...+++++++.+..+.-+|.+..+++-
T Consensus 115 ~~~~~~~~~~~~~~ln~~Gv~~~~~~~ 141 (410)
T PRK11021 115 LLLAELLTLALLWLLNLRGASSSANLQ 141 (410)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 356778888888999999988777643
No 23
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=39.49 E-value=46 Score=35.96 Aligned_cols=249 Identities=16% Similarity=0.135 Sum_probs=132.7
Q ss_pred ccccchhHHHHhhhccccc-CCCCCCc--eeehhHHHHHHHHHhhccccccccccc---hhhHHH-HHHHHHHHhhhhhc
Q 007189 14 GILTPAISVLSASGGIKVD-HPHMSNG--VVVLVAVVILVGLFSLQHYGTDRVGWL---FAPIVL-LWFLLIGGIGMLNI 86 (613)
Q Consensus 14 GvlTPAiSVLSAveGl~v~-~p~~~~~--~vv~is~~ILv~LF~~Q~~GT~kvg~~---F~Pim~-~Wf~~i~~~Giyni 86 (613)
-+.+.+....++.+-+... .|++.++ ....++.++++..+.+.-+|....+++ .+=+.+ .-++.+.+.|++..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~ 167 (426)
T PF13520_consen 88 YILSLASVASSFASYLLSLFGPDLNPSPWPQFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSF 167 (426)
T ss_dssp HHHHHHHHHHHHHHHHTTTTTGGGTCSHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred eeccccccccchhhhhhhccccccccccchheeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeee
Confidence 3444555556666666543 3444321 245678888888999999987666544 333333 45556666777765
Q ss_pred cccCcce-----eEecChHHHHHHHHhcCcc-eeeeecceeeeecchhhhhccCCCCCccceeeehhhhHhhHHHhhhcc
Q 007189 87 WKYDSSV-----LKAFSPVYIYRYFRRGGRD-GWTSLGGIMLSITGTEALFADLAHFPVSAIQIAFTVVVFPCLLLAYSG 160 (613)
Q Consensus 87 ~~~~p~V-----l~A~nP~y~~~f~~~~g~~-g~~~LG~v~L~iTG~EAlyADlGHF~~~~I~~aw~~~v~P~L~L~Y~G 160 (613)
.+ +..- ....+|. +.. -+..++..+.+.+|-|+.=.-.+-.-+|.+..+=..-+.-+.++.-+.
T Consensus 168 ~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~ 237 (426)
T PF13520_consen 168 SF-SGFNSLSFSLSTFFPS---------GWPGFLAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILF 237 (426)
T ss_dssp TC-CHHH----SHSCSSCS---------SSSHHHHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc-cccccccccccccCCc---------cccchhhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhh
Confidence 43 1111 0111111 111 133456678888998886554444545666554433332333333333
Q ss_pred chhhhcccCCc----ccC------cccccc-cCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCceeEEecC
Q 007189 161 QAAYLMNHQDH----VVD------AFYRSI-PDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRVKVVHTS 229 (613)
Q Consensus 161 Q~A~l~~~p~~----~~n------pFy~~~-P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ki~hTS 229 (613)
.-++...-|++ .+| .+++.. .++..+.+.+.+.++..-+-.+.+.+.--++.+.-+-|.+|+ +..|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~ 316 (426)
T PF13520_consen 238 SIALLGALPDDELANSSNSPSPFAVLASAVGGSWLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVN 316 (426)
T ss_dssp HHHHHTTSTHCHHHTTTCHHCHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTS
T ss_pred hheeeecccchhhhcccccccccchhhccccccccccccccccccccccccchhhcchhhcccccccccchhh-hhhhcc
Confidence 33333332321 112 223322 457788888888888877777777777777777888899994 222333
Q ss_pred CccCCceecchhhHHHHHHhh-eeE--Eee---cCchhhhhhhhchhhhHHHHHH
Q 007189 230 KKFLGQIYIPDINWILMILCI-AVT--AGF---KNQSQIGNAYGTAVVIVMLATT 278 (613)
Q Consensus 230 ~~~~GQIYiP~vNw~Lm~~~l-~v~--~~F---~~s~~l~~AYGiaV~~~m~iTT 278 (613)
| +| .|..--++....- +.. ..| ++.+.+.+.+.+......+++.
T Consensus 317 k--~~---~P~~a~~~~~~i~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 366 (426)
T PF13520_consen 317 K--FG---TPYNAIILVAVISSILLLLFLFIPQSSFDILVSLSSVGYLISYILVI 366 (426)
T ss_dssp S--SS---SCHHHHHHHHHHHHHHHHHTTTSSSSHHHHHHHHHHHHTHHHHHHHH
T ss_pred c--cC---CceeeehhhhHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 22 3655444433332 222 223 2335567766666666666553
No 24
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=38.03 E-value=27 Score=39.36 Aligned_cols=90 Identities=20% Similarity=0.258 Sum_probs=58.1
Q ss_pred HcCCCCceeEEecCCccCC----ceecchhhHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHH-----
Q 007189 216 ALGCFPRVKVVHTSKKFLG----QIYIPDINWILMILCIAVTAGFKNQSQIGNAYGTAVVIVMLATTLLMTLIMI----- 286 (613)
Q Consensus 216 ~Lg~fPr~ki~hTS~~~~G----QIYiP~vNw~Lm~~~l~v~~~F~~s~~l~~AYGiaV~~~m~iTT~l~~~v~~----- 286 (613)
+.|-.||+-+...=++..| |+|+|.+= +..+.=|---=|-++-.+=-.+++|+|..|||++...=.-
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~n~slPrvS 300 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTSTNESLPRVS 300 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhhhccCCCcc
Confidence 3789999999999888888 99999862 1111112222345555666889999999999999875221
Q ss_pred HHHhhhHHHHHHHHHHHHH-HHHH
Q 007189 287 LVWRCHWILVLIFTALSLV-VECT 309 (613)
Q Consensus 287 ~~w~~~~~~~~~~~~~f~~-ie~~ 309 (613)
+|--.-+.+...|+.+|++ +|-+
T Consensus 301 YVKAiDiYL~vCFvfVF~sLLEYA 324 (459)
T KOG3643|consen 301 YVKAIDVYLGVCFVFVFLSLLEYA 324 (459)
T ss_pred ceeeehhhhhHHHHHHHHHHHHHH
Confidence 1222334555666666665 4433
No 25
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=33.88 E-value=2.8e+02 Score=31.53 Aligned_cols=46 Identities=15% Similarity=0.185 Sum_probs=24.1
Q ss_pred ceeeeecchhhh--hccCCCCCccceeeehhhhHhhHHHhhhccchhh
Q 007189 119 GIMLSITGTEAL--FADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAY 164 (613)
Q Consensus 119 ~v~L~iTG~EAl--yADlGHF~~~~I~~aw~~~v~P~L~L~Y~GQ~A~ 164 (613)
+++.+.+|-|+. .|+==+-.+|.+-.|=...+.=+.++.++|--++
T Consensus 202 ~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i 249 (507)
T TIGR00910 202 AFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSI 249 (507)
T ss_pred HHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 345567888865 5554455566665554443333344444443333
No 26
>PRK10249 phenylalanine transporter; Provisional
Probab=33.67 E-value=2.2e+02 Score=31.66 Aligned_cols=102 Identities=25% Similarity=0.272 Sum_probs=51.8
Q ss_pred hHHHHHHHHHhhcccccccccc---chhhHHHHHHHHHHHhhhhhccccCcceeEecChHHHHHH--HHhcCcce-eeee
Q 007189 44 VAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLNIWKYDSSVLKAFSPVYIYRY--FRRGGRDG-WTSL 117 (613)
Q Consensus 44 is~~ILv~LF~~Q~~GT~kvg~---~F~Pim~~Wf~~i~~~Giyni~~~~p~Vl~A~nP~y~~~f--~~~~g~~g-~~~L 117 (613)
++.++++++..+.-+|....|. .++=+.++..+.+.++|+.-+...++.- ..++.+..+. +..+|..| +..+
T Consensus 138 ~~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~ 215 (458)
T PRK10249 138 WAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFATGWNGLILSL 215 (458)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCCCcHHHHHHHH
Confidence 4566677777788888765554 3333344455555556665443322210 1111111000 00122222 2345
Q ss_pred cceeeeecchhhh--hccCCCCCccceeeehh
Q 007189 118 GGIMLSITGTEAL--FADLAHFPVSAIQIAFT 147 (613)
Q Consensus 118 G~v~L~iTG~EAl--yADlGHF~~~~I~~aw~ 147 (613)
..++.+.+|-|.. .|+=-+-.+|.|-.|=.
T Consensus 216 ~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~ 247 (458)
T PRK10249 216 AVIMFSFGGLELIGITAAEARDPEKSIPKAVN 247 (458)
T ss_pred HHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHH
Confidence 5567778898865 66666666777655543
No 27
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=33.61 E-value=3.3e+02 Score=29.96 Aligned_cols=45 Identities=13% Similarity=0.290 Sum_probs=26.9
Q ss_pred ehhHHHHHHHHHhhcccccc---ccccchhhHHHHHHHHHHHhhhhhc
Q 007189 42 VLVAVVILVGLFSLQHYGTD---RVGWLFAPIVLLWFLLIGGIGMLNI 86 (613)
Q Consensus 42 v~is~~ILv~LF~~Q~~GT~---kvg~~F~Pim~~Wf~~i~~~Giyni 86 (613)
..+++++++.+..+.-+|.+ |+...+.=+.++=++.+.+.|++..
T Consensus 128 ~~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~~ 175 (445)
T PRK11357 128 KFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFWF 175 (445)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 34566667777788888865 4444444444444555556666543
No 28
>PF00324 AA_permease: Amino acid permease; InterPro: IPR004841 Amino acid permeases are integral membrane proteins involved in the transport of amino acids into the cell. A number of such proteins have been found to be evolutionary related [], [], []. These proteins seem to contain up to 12 transmembrane segments. The best conserved region in this family is located in the second transmembrane segment. This domain is found in a wide variety of permeases, as well as several hypothetical proteins. ; GO: 0006810 transport, 0055085 transmembrane transport, 0016020 membrane
Probab=31.51 E-value=34 Score=37.98 Aligned_cols=34 Identities=26% Similarity=0.293 Sum_probs=21.8
Q ss_pred eeeecceeeeecchh--hhhccCCCCCccceeeehh
Q 007189 114 WTSLGGIMLSITGTE--ALFADLAHFPVSAIQIAFT 147 (613)
Q Consensus 114 ~~~LG~v~L~iTG~E--AlyADlGHF~~~~I~~aw~ 147 (613)
|..+.-.+.+.+|-| +.+|+==.=-+|+|..|-.
T Consensus 203 ~~~~~~~~~af~G~e~~a~~a~E~k~P~k~IPra~~ 238 (478)
T PF00324_consen 203 FAALVFAFFAFVGFESIAILAEEAKNPRKTIPRATL 238 (478)
T ss_pred HHhhhhhhcccccccccccccccCCCchhhhhhHhh
Confidence 445566788888988 4555555556667755543
No 29
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=31.07 E-value=6e+02 Score=29.35 Aligned_cols=45 Identities=24% Similarity=0.454 Sum_probs=27.0
Q ss_pred eehhHHHHHHHHHhhcccccccccc---chhhHHHHHHHHHHHhhhhh
Q 007189 41 VVLVAVVILVGLFSLQHYGTDRVGW---LFAPIVLLWFLLIGGIGMLN 85 (613)
Q Consensus 41 vv~is~~ILv~LF~~Q~~GT~kvg~---~F~Pim~~Wf~~i~~~Giyn 85 (613)
...+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+..
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~~ 208 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTK 208 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHhh
Confidence 3456677777777888889765554 44444444445555566653
No 30
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=30.33 E-value=11 Score=37.40 Aligned_cols=61 Identities=23% Similarity=0.399 Sum_probs=46.4
Q ss_pred HHhhHhcCcEEEeeccEEEecCCCchHHHHHHHHHHHHH---HhhccCCCcccccCCCCeEeeee
Q 007189 548 LNSCRDAGVVHILGNTVVRASRGSKFYKKIAIDYIYAFL---RKICRENSVIFNVPHESLLNVGQ 609 (613)
Q Consensus 548 L~~AkeaGVvYIlG~~~vkakk~Ss~lKKivIn~~Y~FL---RkNcR~~~~~L~IPh~~LlEVGM 609 (613)
+++++++|+--++-.. .+.++=..+..|+=+||+|.-. +++.|...+.+++|.++.+-||-
T Consensus 55 ~~e~k~~gi~v~vvSN-n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGD 118 (175)
T COG2179 55 LAELKEAGIKVVVVSN-NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVGD 118 (175)
T ss_pred HHHHHhcCCEEEEEeC-CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEcc
Confidence 5567788875444332 5666667788888899887663 67888999999999999999984
No 31
>PRK10746 putative transport protein YifK; Provisional
Probab=28.48 E-value=3.2e+02 Score=30.55 Aligned_cols=25 Identities=12% Similarity=0.032 Sum_probs=17.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHhHHHH
Q 007189 322 GWVPLVIAAAFLVIMYVWHYGTVKR 346 (613)
Q Consensus 322 GW~pl~ia~~~~~im~~W~~G~~~~ 346 (613)
.......+.+++.++..++...+.-
T Consensus 427 ~~~~~~~~~~~~~~~~~~y~~~~~~ 451 (461)
T PRK10746 427 TRMSLFVGIIFLLAVTLIYKVFGLN 451 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4567777888777777776654433
No 32
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=28.13 E-value=2.2e+02 Score=31.21 Aligned_cols=24 Identities=21% Similarity=0.354 Sum_probs=16.8
Q ss_pred hhHHHHHHHHHhhccccccccccc
Q 007189 43 LVAVVILVGLFSLQHYGTDRVGWL 66 (613)
Q Consensus 43 ~is~~ILv~LF~~Q~~GT~kvg~~ 66 (613)
.+++++++.+..+.-+|.+..+.+
T Consensus 123 ~~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 123 LAALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhH
Confidence 455666667778888888776654
No 33
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=27.87 E-value=1.5e+02 Score=32.77 Aligned_cols=23 Identities=22% Similarity=0.254 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHhhcccccccccc
Q 007189 43 LVAVVILVGLFSLQHYGTDRVGW 65 (613)
Q Consensus 43 ~is~~ILv~LF~~Q~~GT~kvg~ 65 (613)
.+..++++++..+.-+|+...++
T Consensus 127 ~~~~~~~~~~~~ln~~gvk~~~~ 149 (445)
T PRK10644 127 ITCVVVLWIFVLLNIVGPKMITR 149 (445)
T ss_pred HHHHHHHHHHHHHHHhchHHHHH
Confidence 34566666777888888766554
No 34
>PRK10238 aromatic amino acid transporter; Provisional
Probab=27.71 E-value=5.1e+02 Score=28.82 Aligned_cols=43 Identities=33% Similarity=0.353 Sum_probs=25.8
Q ss_pred ecceeeeecchhh--hhccCCCCCccceeeehhhhHhhHHHhhhcc
Q 007189 117 LGGIMLSITGTEA--LFADLAHFPVSAIQIAFTVVVFPCLLLAYSG 160 (613)
Q Consensus 117 LG~v~L~iTG~EA--lyADlGHF~~~~I~~aw~~~v~P~L~L~Y~G 160 (613)
++.++.+.+|-|+ ..|+=-+=.+|.+-.|=.. +.-.+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 4456778889887 4555556667777776532 22344455654
No 35
>PRK11387 S-methylmethionine transporter; Provisional
Probab=27.20 E-value=3.6e+02 Score=30.08 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=12.3
Q ss_pred HHHHHHHHHhhccccccccc
Q 007189 45 AVVILVGLFSLQHYGTDRVG 64 (613)
Q Consensus 45 s~~ILv~LF~~Q~~GT~kvg 64 (613)
.+++++.+..+.-+|....+
T Consensus 133 ~~~~~~~~~~in~~gvk~~~ 152 (471)
T PRK11387 133 CLLFCALIFGLNVVSTRFFA 152 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHH
Confidence 34444556677778876554
No 36
>cd05900 Ig_Aggrecan Immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. Ig_Aggrecan: immunoglobulin (Ig)-like domain of the chondroitin sulfate proteoglycan core protein (CSPG), aggrecan. These aggregates contribute to the tissue's load bearing properties. In CSPGs, the Ig-like domain is followed by hyaluronan (HA)-binding tandem repeats, and a C-terminal region with epidermal growth factor-like, lectin-like, and complement regulatory protein-like domains. Separating these N- and C-terminal regions is a nonhomologous glycosaminoglycan attachment region. In cartilage, aggrecan forms cartilage link protein stabilized aggregates with HA. These aggregates contribute to the tissue's load bearing properties. Aggrecan has a wide distribution in connective tissue and extracellular matrices. Members of the vertebrate HPLN (hyaluronan/HA and proteoglycan binding link) protein family are physically linked adjacent to CSPG genes.
Probab=26.66 E-value=90 Score=28.46 Aligned_cols=30 Identities=13% Similarity=0.317 Sum_probs=22.6
Q ss_pred CceEEEEEecCCCCcEEEEEEEeeecccCC
Q 007189 420 EERFLVKRIGPKNFHMFRCVARYGYKDLHK 449 (613)
Q Consensus 420 ~eR~~v~~~~~~~~~~yR~vvRYGY~D~~~ 449 (613)
+--+.+..+...+.+.|||.+.+|.-|+.+
T Consensus 73 ~asL~I~nl~~sDsG~Y~C~V~~g~~~~~~ 102 (112)
T cd05900 73 DATLEITELRSNDSGTYRCEVMHGIEDNYD 102 (112)
T ss_pred CcEEEEeecccccCEEEEEEEecCCCCcee
Confidence 334456666677789999999999888654
No 37
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=24.84 E-value=5.7e+02 Score=28.53 Aligned_cols=105 Identities=12% Similarity=0.089 Sum_probs=48.0
Q ss_pred cceeeeecchhhh--hccCCCCCccceeeehhhhHhhHHHhhhccchhhhc--ccCCc---ccCcccccc----cCcchH
Q 007189 118 GGIMLSITGTEAL--FADLAHFPVSAIQIAFTVVVFPCLLLAYSGQAAYLM--NHQDH---VVDAFYRSI----PDSIYW 186 (613)
Q Consensus 118 G~v~L~iTG~EAl--yADlGHF~~~~I~~aw~~~v~P~L~L~Y~GQ~A~l~--~~p~~---~~npFy~~~----P~~~~~ 186 (613)
..++.+.+|-|+. .|.==+-.+|.|..|-. ...-...+.|+-....+. ..+++ .++||-... -++...
T Consensus 218 ~~~~~af~G~e~~~~~a~E~knP~r~iPrai~-~~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 296 (469)
T PRK11049 218 QIAVFAFVGIELVGTTAAETKDPEKSLPRAIN-SIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAAS 296 (469)
T ss_pred HHHHHHHhcHHHHHHHHHHhcCHhhHHHHHHH-HHHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhHHH
Confidence 3356667788864 34434556666666553 222233344444333222 12222 235543221 112222
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCce
Q 007189 187 PVFIVATAAAIVASQATISATFSIIKQALALGCFPRV 223 (613)
Q Consensus 187 P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 223 (613)
-+.+++.++.+-+..+.+.+.=-+....-+-|.+|+.
T Consensus 297 ~~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 333 (469)
T PRK11049 297 VINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA 333 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 2233333333334444444444555555578999964
No 38
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=24.35 E-value=76 Score=24.70 Aligned_cols=28 Identities=18% Similarity=0.557 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHhHHHHHHHHHhcCCChH
Q 007189 331 AFLVIMYVWHYGTVKRYEFEMHSKVSMA 358 (613)
Q Consensus 331 ~~~~im~~W~~G~~~~~~~~~~~~~~~~ 358 (613)
+++.....|.|-+++|.++|...+++++
T Consensus 20 ~~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 20 VFFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHHcccchhhHHHHHccCcc
Confidence 3344445555555555555655566654
No 39
>PF08733 PalH: PalH/RIM21; InterPro: IPR014844 PalH (also known as RIM21) is a transmembrane protein required for proteolytic cleavage of Rim101/PacC transcription factors which are activated by C-terminal proteolytic processing. Rim101/PacC family proteins play a key role in pH-dependent responses and PalH has been implicated as a pH sensor [].
Probab=24.16 E-value=5e+02 Score=28.46 Aligned_cols=139 Identities=21% Similarity=0.215 Sum_probs=87.2
Q ss_pred hhhhhhhhHHHHHHcCC-CCceeEEecCCccCCceecchhhHHHHHHhheeEEeec-------CchhhhhhhhchhhhHH
Q 007189 203 TISATFSIIKQALALGC-FPRVKVVHTSKKFLGQIYIPDINWILMILCIAVTAGFK-------NQSQIGNAYGTAVVIVM 274 (613)
Q Consensus 203 ~Isg~FSi~~Qa~~Lg~-fPr~ki~hTS~~~~GQIYiP~vNw~Lm~~~l~v~~~F~-------~s~~l~~AYGiaV~~~m 274 (613)
+||-+|.-+.|..-+=. |||-| -+..|=.+.-+|+++..++-+..+ +.+....---.....-.
T Consensus 168 lis~~~l~l~qvqiv~rlF~R~~---------eK~~i~~vG~~L~i~~~il~ai~~f~~~~~~~~~~~~~lp~~~yl~~i 238 (348)
T PF08733_consen 168 LISNFFLQLAQVQIVIRLFPRQK---------EKRIIFWVGFILIILDQILWAINQFSYFDSDPNSFLDILPAFSYLFRI 238 (348)
T ss_pred HHHHHHHHHHHHHHHHHhhcccC---------cEEEEeeHHHHHHHHHHHHHHHHHhccCCCCccccccchHHHHHHHHH
Confidence 57888888888876655 48854 233466677777777665544433 22222222233344555
Q ss_pred HHHHHHHHHHHHHHHhh--------hHHHHHHHHHHHHHHHHHHHHhhhccccCCCh---HHHHHHHHHHHHHHHHHHhH
Q 007189 275 LATTLLMTLIMILVWRC--------HWILVLIFTALSLVVECTYFSAVLFKVDQGGW---VPLVIAAAFLVIMYVWHYGT 343 (613)
Q Consensus 275 ~iTT~l~~~v~~~~w~~--------~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW---~pl~ia~~~~~im~~W~~G~ 343 (613)
.+-++...++..+.|++ +.+...++-++...+..+||..-..+..-=|| ++-+..++..++-+=|-+-=
T Consensus 239 al~~~ya~~v~~y~~~k~k~~~~~~~~~~L~il~~~~i~l~~vffI~dis~~~v~~w~~~~~~~~~~~~tVivWEWi~ri 318 (348)
T PF08733_consen 239 ALSTLYAAWVIYYIISKKKYCFDYKQMIPLAILNLLLILLPVVFFILDISNWWVSGWSEYFRWVLYVAATVIVWEWINRI 318 (348)
T ss_pred HHHHHHHHHHHHHHHhhhhhheecchHHHHHHHHHHHHHHHHHhheeEccchhhhhHHHHHHHHHHHHHhhhHHHhhhHH
Confidence 66777777777777764 34455666777777888899888888888888 66666666666655555444
Q ss_pred HHHHHHH
Q 007189 344 VKRYEFE 350 (613)
Q Consensus 344 ~~~~~~~ 350 (613)
+++.+.+
T Consensus 319 e~lEr~~ 325 (348)
T PF08733_consen 319 ERLERKE 325 (348)
T ss_pred HHHHHHH
Confidence 4443333
No 40
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=23.63 E-value=6.9e+02 Score=27.77 Aligned_cols=44 Identities=9% Similarity=-0.199 Sum_probs=29.1
Q ss_pred ccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCce
Q 007189 180 IPDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRV 223 (613)
Q Consensus 180 ~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 223 (613)
..++..+.+.+.+.++..-+..+.+.++=-+..+.-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34455555555556666666666666666677777788999965
No 41
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=23.49 E-value=2.6e+02 Score=31.11 Aligned_cols=43 Identities=9% Similarity=-0.060 Sum_probs=24.3
Q ss_pred cCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHHcCCCCce
Q 007189 181 PDSIYWPVFIVATAAAIVASQATISATFSIIKQALALGCFPRV 223 (613)
Q Consensus 181 P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~~Lg~fPr~ 223 (613)
.++...-+.+.+.+++.-+..+.+.+.--+..+.-+-|.+|+.
T Consensus 279 g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~~ 321 (473)
T TIGR00905 279 GKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321 (473)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH
Confidence 3433333333344444444455566666666666688999974
No 42
>PF06155 DUF971: Protein of unknown function (DUF971); InterPro: IPR010376 This domain is found in gamma-butyrobetaine dioxygenase and trimethyllysine dioxygenase proteins.; PDB: 2L6N_A 3LUU_A 2L6P_A 3MS5_A 3O2G_A 3N6W_A.
Probab=23.30 E-value=46 Score=28.84 Aligned_cols=14 Identities=29% Similarity=0.546 Sum_probs=10.7
Q ss_pred HHHHHhhccCCCcc
Q 007189 583 YAFLRKICRENSVI 596 (613)
Q Consensus 583 Y~FLRkNcR~~~~~ 596 (613)
|.|||+|||.+.-.
T Consensus 26 ~~~LRd~C~Ca~C~ 39 (89)
T PF06155_consen 26 YEWLRDNCPCAECR 39 (89)
T ss_dssp HHHHHHT-SSSSTC
T ss_pred HHHHhccCCChhhc
Confidence 78999999987644
No 43
>PF05313 Pox_P21: Poxvirus P21 membrane protein; InterPro: IPR007977 The p21 membrane protein of vaccinia virus, encoded by the A17L (or A18L) gene, has been reported to localise on the inner of the two membranes of the intracellular mature virus (IMV). It has also been shown that p21 acts as a membrane anchor for the externally located fusion protein P14 (A27L gene) [].; GO: 0016021 integral to membrane
Probab=22.11 E-value=1.1e+02 Score=30.90 Aligned_cols=60 Identities=20% Similarity=0.216 Sum_probs=38.3
Q ss_pred ehhhhHhhHHHhhhccchhhh-cccCCcccCcccccccCcchHHHHHHHHHHHHHhhhhhhhhhhhhHHHHH
Q 007189 145 AFTVVVFPCLLLAYSGQAAYL-MNHQDHVVDAFYRSIPDSIYWPVFIVATAAAIVASQATISATFSIIKQAL 215 (613)
Q Consensus 145 aw~~~v~P~L~L~Y~GQ~A~l-~~~p~~~~npFy~~~P~~~~~P~~vlAtlAaIIASQA~Isg~FSi~~Qa~ 215 (613)
|=+.+=+|||+.+|+ +.+ +.||.+..| -.+-.--++.|+..=++-||+ +|.+|+++..-+
T Consensus 89 As~llP~PsLVIaYC---l~mqi~~~~~~~~-------~gMsIvcv~~Si~ti~~~~~s-~s~~~~ti~yIi 149 (189)
T PF05313_consen 89 ASLLLPFPSLVIAYC---LSMQIYNPGANNN-------VGMSIVCVIMSIITIIVNSVS-GSSGAYTISYII 149 (189)
T ss_pred HHHHcCccHHHHHHH---HHheeecCCCcce-------ehhHHHHHHHHHHHHHHHhhh-HhHHHHHHHHHH
Confidence 334456799999997 333 568876665 334444455555555667788 777777766544
No 44
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=21.10 E-value=32 Score=36.95 Aligned_cols=61 Identities=20% Similarity=0.373 Sum_probs=0.0
Q ss_pred HHHHHHhh--hHHHHHHHHHHHHHHHHHHHHhhhccccCCChHHHHHH---HHHHHHHHHHHHhHHHHH
Q 007189 284 IMILVWRC--HWILVLIFTALSLVVECTYFSAVLFKVDQGGWVPLVIA---AAFLVIMYVWHYGTVKRY 347 (613)
Q Consensus 284 v~~~~w~~--~~~~~~~~~~~f~~ie~~f~sa~l~K~~~GGW~pl~ia---~~~~~im~~W~~G~~~~~ 347 (613)
.|.+.|+. ++|-.+.|++.|+.-=++...|.+ .+=.||++++- .++|.-.++|-|-+....
T Consensus 125 Ym~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~---L~qaWfT~L~dL~WL~LFlaiLIWlY~H~~~~ 190 (381)
T PF05297_consen 125 YMWLLRELGASFWTILAFCLAFLLAIVLLIIAVL---LHQAWFTILVDLYWLLLFLAILIWLYVHDQRH 190 (381)
T ss_dssp ---------------------------------------------------------------------
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 34455553 678888888877654444445554 46789999875 457777889998877654
No 45
>TIGR01940 nqrE NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit. This model represents the NqrE subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump.
Probab=20.40 E-value=3.2e+02 Score=27.96 Aligned_cols=45 Identities=18% Similarity=0.335 Sum_probs=29.7
Q ss_pred HHHHHhheeEEeecCchhhhhhh--hchhhhHHHHHHHHHHHHHHHH
Q 007189 244 ILMILCIAVTAGFKNQSQIGNAY--GTAVVIVMLATTLLMTLIMILV 288 (613)
Q Consensus 244 ~Lm~~~l~v~~~F~~s~~l~~AY--GiaV~~~m~iTT~l~~~v~~~~ 288 (613)
..+.-.+.++-...-|+++.||- |+||+.||.+++.+..++-..+
T Consensus 16 ~vl~~~LGlCp~l~vs~~~~~a~gmGlAvtfV~~~s~~~~~~i~~~i 62 (200)
T TIGR01940 16 MALSFFLGMCTFLAVSKKVSTAFGLGVAVTFVLTITVPINNLIYTYI 62 (200)
T ss_pred HHHHHHHhcCchhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33333344444455566666665 6789999999999888876654
Done!