BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007190
(613 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FGM0|FTSHB_ARATH ATP-dependent zinc metalloprotease FTSH 11,
chloroplastic/mitochondrial OS=Arabidopsis thaliana
GN=FTSH11 PE=1 SV=1
Length = 806
Score = 1065 bits (2754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/602 (88%), Positives = 579/602 (96%)
Query: 12 PEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYLPDEQSGKPTTLPALLQELQHRAS 71
PEAV++RFEQR+H VDSRGV EY+RALV TNAI+EYLPDEQ+GKP++LPALLQEL+HRAS
Sbjct: 205 PEAVVQRFEQREHTVDSRGVAEYIRALVITNAISEYLPDEQTGKPSSLPALLQELKHRAS 264
Query: 72 RNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQELISTILFTVAVGLVWLMGAAALQK 131
N +E F+NPG+SEKQPLHV MV+PKVSNKSRFAQEL+STILFTVAVGLVW+MGAAALQK
Sbjct: 265 GNMDESFVNPGISEKQPLHVTMVNPKVSNKSRFAQELVSTILFTVAVGLVWIMGAAALQK 324
Query: 132 YIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNP 191
YIGSLGGIGTSGVGSSSSY+PKELNKE+ PEKNVKTFKDVKGCDDAKQEL EVVEYLKNP
Sbjct: 325 YIGSLGGIGTSGVGSSSSYSPKELNKEITPEKNVKTFKDVKGCDDAKQELEEVVEYLKNP 384
Query: 192 SKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVR 251
SKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVR
Sbjct: 385 SKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVR 444
Query: 252 SLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATN 311
SLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGII+MAATN
Sbjct: 445 SLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIIVMAATN 504
Query: 312 LPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNG 371
LPDILDPALTRPGRFDRHIVVP+PDVRGR+EILELYLQ KP+++DVDVKAIARGTPGFNG
Sbjct: 505 LPDILDPALTRPGRFDRHIVVPSPDVRGREEILELYLQGKPMSEDVDVKAIARGTPGFNG 564
Query: 372 ADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGH 431
ADLANLVNIAAIKAAV+G EKL++ +LEFAKDRI+MGTERKTMF+SE+SKKLTAYHESGH
Sbjct: 565 ADLANLVNIAAIKAAVEGAEKLSSEQLEFAKDRIVMGTERKTMFVSEDSKKLTAYHESGH 624
Query: 432 AIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEEL 491
AIVA NT+GAHPIHKATIMPRGSALGMVTQLPS+DETSVS++QLLARLDVCMGGRVAEEL
Sbjct: 625 AIVALNTKGAHPIHKATIMPRGSALGMVTQLPSNDETSVSKRQLLARLDVCMGGRVAEEL 684
Query: 492 IFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRPSSEMQSRIDAEVVKLL 551
IFG DHITTGASSDL ATELA YMVS+CGMS+AIGPVHIK+RPSS+MQSRIDAEVVKLL
Sbjct: 685 IFGLDHITTGASSDLSQATELAQYMVSSCGMSEAIGPVHIKERPSSDMQSRIDAEVVKLL 744
Query: 552 REAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPEQQEELEEDLV 611
REAY+RVK+LLK+HEKQLH LANALLEYETL+AE+IKRILLP +EG+ E+Q++ E DLV
Sbjct: 745 REAYERVKSLLKRHEKQLHTLANALLEYETLTAEDIKRILLPKQEGEKFEEQQQEEGDLV 804
Query: 612 LA 613
LA
Sbjct: 805 LA 806
>sp|A2ZVG7|FTSH9_ORYSJ ATP-dependent zinc metalloprotease FTSH 9,
chloroplastic/mitochondrial OS=Oryza sativa subsp.
japonica GN=FTSH9 PE=3 SV=1
Length = 784
Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/614 (82%), Positives = 558/614 (90%), Gaps = 17/614 (2%)
Query: 10 FSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYLPDEQSGKPTTLPALLQELQHR 69
FSPE VIKRFEQR H VDSRGV EYLRAL+ TN I +YLPDEQSG+ +LPALLQEL+ R
Sbjct: 168 FSPEDVIKRFEQRSHAVDSRGVAEYLRALILTNGIADYLPDEQSGRSASLPALLQELKQR 227
Query: 70 ASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKS-RFAQELISTILFTVAVGLVWLMGAAA 128
S N ++PF+NPG+SEKQPLHVVMVDPK + +S RFAQE+ ST+LFT+AVGL+W+MGAAA
Sbjct: 228 VSGNEDKPFMNPGISEKQPLHVVMVDPKATGRSTRFAQEIFSTVLFTIAVGLMWVMGAAA 287
Query: 129 LQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYL 188
LQKYIGSLGGIG SGVGSSSSY+PKELNK++MPEKNVKTFKDVKGCDDAK+EL EVVEYL
Sbjct: 288 LQKYIGSLGGIGASGVGSSSSYSPKELNKDIMPEKNVKTFKDVKGCDDAKKELEEVVEYL 347
Query: 189 KNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGAR 248
KNPSKFTRLGGKLPKGILLTG+PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGAR
Sbjct: 348 KNPSKFTRLGGKLPKGILLTGSPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGAR 407
Query: 249 RVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMA 308
RVRSLFQAAKKKAPCI+FIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGII+MA
Sbjct: 408 RVRSLFQAAKKKAPCIVFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIIVMA 467
Query: 309 ATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPG 368
ATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKP++ DVDV AIAR TPG
Sbjct: 468 ATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPVSSDVDVNAIARSTPG 527
Query: 369 FNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKK------ 422
FNGADLANLVNIAAIKAAV+G +KL A +LEFAKDRI+MGTERK+MFIS+ESKK
Sbjct: 528 FNGADLANLVNIAAIKAAVEGADKLAAAQLEFAKDRIIMGTERKSMFISDESKKACLFKL 587
Query: 423 ---------LTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQK 473
LTAYHESGHAIVA NT+GAHPIHKATI+PRGSALGMVTQLPS DETS+S+K
Sbjct: 588 LYFILRELILTAYHESGHAIVALNTQGAHPIHKATILPRGSALGMVTQLPSQDETSISKK 647
Query: 474 QLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKD 533
QLLARLDVCMGGRVAEELIFG D++TTGA +DLH+ATELA YMVSNCGMSDAIGPVH+K+
Sbjct: 648 QLLARLDVCMGGRVAEELIFGEDNVTTGARNDLHTATELAQYMVSNCGMSDAIGPVHVKE 707
Query: 534 RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLP 593
RPS EMQSRIDAEVVKLLREAY RVK LLKKHEKQLHALANALLE ETL+A+EI +++ P
Sbjct: 708 RPSVEMQSRIDAEVVKLLREAYGRVKRLLKKHEKQLHALANALLERETLTADEINKVVHP 767
Query: 594 YR-EGQLPEQQEEL 606
Y+ E QL Q+E+
Sbjct: 768 YQEEPQLSFQEEDF 781
>sp|O80983|FTSH4_ARATH ATP-dependent zinc metalloprotease FTSH 4, mitochondrial
OS=Arabidopsis thaliana GN=FTSH4 PE=1 SV=2
Length = 717
Score = 601 bits (1549), Expect = e-171, Method: Compositional matrix adjust.
Identities = 329/609 (54%), Positives = 432/609 (70%), Gaps = 41/609 (6%)
Query: 12 PEAVIKRFE-QRDHEVDSRGVVEYLRALVATNAI--TEYLPDEQSGKPTTLPALLQELQH 68
PEAVI+ FE Q ++ + EY++ALV + + +E + Q G + + +E +
Sbjct: 85 PEAVIRMFESQPSLHANASALSEYIKALVKVDRLDQSELVRTLQRG----IAGVAREEET 140
Query: 69 ----RASRNTNEPFLNPGV--SEKQPLHVVMVDPKVSNKSRFAQELISTILFTVAVGLVW 122
A RN +P GV + P+H + + ++ F ++L STI T+ VG +
Sbjct: 141 FGGLGAFRNVGKP-TKDGVLGTASAPIHTISTE-----RTHFKEQLWSTIR-TIGVGFLL 193
Query: 123 LMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQEL 181
+ G AL + G G+G L++EV P + T F DVKG D+AK EL
Sbjct: 194 ISGIGALIEDRGIGKGLG--------------LHEEVQPSMDSSTKFSDVKGVDEAKAEL 239
Query: 182 VEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEM 241
E+V YL++P +FTRLGGKLPKG+LL G PGTGKT+LA+AIAGEAGVPFF +GSEFEEM
Sbjct: 240 EEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCSGSEFEEM 299
Query: 242 FVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEGHTKKTLHQLLVEMDGFEQ 300
FVGVGARRVR LF AAKK +PCIIFIDEIDA+G +R + + + K TL+Q+LVE+DGF+Q
Sbjct: 300 FVGVGARRVRDLFSAAKKCSPCIIFIDEIDAIGGSRNPKDQQYMKMTLNQMLVELDGFKQ 359
Query: 301 NEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVK 360
NEGII++AATN P+ LD AL RPGRFDRHIVVPNPDV GR++ILE ++ A+DVD+
Sbjct: 360 NEGIIVVAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLKAEDVDLM 419
Query: 361 AIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEES 420
IARGTPGF+GADLANLVN+AA+KAA+DG + +T ++LEFAKDRI+MG+ERK+ IS+ES
Sbjct: 420 IIARGTPGFSGADLANLVNVAALKAAMDGSKDVTMSDLEFAKDRIMMGSERKSAVISDES 479
Query: 421 KKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLD 480
+KLTA+HE GHA+VA +TEGA P+HKATI+PRG ALGMV+QLP DETS+S+KQ+LARLD
Sbjct: 480 RKLTAFHEGGHALVAIHTEGALPVHKATIVPRGMALGMVSQLPDKDETSISRKQMLARLD 539
Query: 481 VCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPV-HIKD----RP 535
VCMGGRVAEELIFG +T+GASSDL AT+LA MV+ GMS +G V H D
Sbjct: 540 VCMGGRVAEELIFGESEVTSGASSDLEQATKLARAMVTKFGMSKEVGLVAHNYDDNGKSM 599
Query: 536 SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYR 595
S+E + I++EV +LL +AY+ K +L + K+LHALANALL++ETLS ++IK +L
Sbjct: 600 STETRLLIESEVKQLLEKAYNNAKTILTVYNKELHALANALLQHETLSGKQIKELLTDLN 659
Query: 596 EGQLPEQQE 604
L ++QE
Sbjct: 660 SPLLQKRQE 668
>sp|Q8LQJ8|FTSH5_ORYSJ ATP-dependent zinc metalloprotease FTSH 5, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH5 PE=3 SV=1
Length = 715
Score = 589 bits (1519), Expect = e-167, Method: Compositional matrix adjust.
Identities = 329/616 (53%), Positives = 420/616 (68%), Gaps = 51/616 (8%)
Query: 12 PEAVIKRFE-QRDHEVDSRGVVEYLRALVATNAI--TEYLPDEQSGKPTTLPALLQELQH 68
PE VI+ FE Q + + EY++ALV + + + L Q G + A +E ++
Sbjct: 81 PERVIQIFESQPSLHSNPSALAEYVKALVRVDRLEDSTLLKTLQRG----IAASAREEEN 136
Query: 69 RASRNTN----EPFLNPGVSEKQ--------PLHVVMVDPKVSNKSRFAQELISTILFTV 116
S + N F + G K P+H+V + +F ++L T ++
Sbjct: 137 LGSVSENLGSVSAFRSAGQVTKDGILGTANAPIHMVTAE-----TGQFKEQLWRT-FRSI 190
Query: 117 AVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMP--EKNVKTFKDVKGC 174
A+ + + G AL + G G+G LN+EV P E N K F DVKG
Sbjct: 191 ALTFLLISGIGALIEDRGISKGLG--------------LNEEVQPSMESNTK-FSDVKGV 235
Query: 175 DDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRA 234
D+AK EL E+V YL++P +FTRLGGKLPKG+LL G PGTGKT+LA+AIAGEAGVPFF +
Sbjct: 236 DEAKAELEEIVHYLRDPKRFTRLGGKLPKGVLLVGPPGTGKTMLARAIAGEAGVPFFSCS 295
Query: 235 GSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEGHTKKTLHQLLV 293
GSEFEEMFVGVGARRVR LF AAKK++PCIIF+DEIDA+G +R + + + K TL+QLLV
Sbjct: 296 GSEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAIGGSRNPKDQQYMKMTLNQLLV 355
Query: 294 EMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPL 353
E+DGF+QNEGII++AATN P+ LD AL RPGRFDRHIVVPNPDV GR++ILE ++
Sbjct: 356 ELDGFKQNEGIIVIAATNFPESLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMSKVLK 415
Query: 354 ADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKT 413
+DDVD+ IARGTPGF+GADLANLVN+AA+KAA+DG + +T +LE+AKDRI+MG+ERK+
Sbjct: 416 SDDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDLEYAKDRIMMGSERKS 475
Query: 414 MFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQK 473
IS+ES+KLTAYHE GHA+VA +TEGAHP+HKATI+PRG ALGMV QLP DETSVS+K
Sbjct: 476 AVISDESRKLTAYHEGGHALVAIHTEGAHPVHKATIVPRGMALGMVAQLPDKDETSVSRK 535
Query: 474 QLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIK- 532
Q+LARLDVCMGGRVAEELIFG +T+GASSD AT +A MV+ GMS +G V
Sbjct: 536 QMLARLDVCMGGRVAEELIFGDSEVTSGASSDFQQATAVARAMVTKYGMSKQLGFVSYNY 595
Query: 533 --DRPSSEMQSR--IDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIK 588
D S ++R I+ EV + AY+ K +L KH K+LHALANALLE+ETL+ +IK
Sbjct: 596 EDDGKSMSTETRLLIEKEVKCFVENAYNNAKNILIKHNKELHALANALLEHETLTGAQIK 655
Query: 589 RILLPYREGQLPEQQE 604
IL Q QQE
Sbjct: 656 NILAQVNNKQ---QQE 668
>sp|Q8LQJ9|FTSH4_ORYSJ ATP-dependent zinc metalloprotease FTSH 4, mitochondrial OS=Oryza
sativa subsp. japonica GN=FTSH4 PE=3 SV=1
Length = 709
Score = 565 bits (1456), Expect = e-160, Method: Compositional matrix adjust.
Identities = 314/619 (50%), Positives = 411/619 (66%), Gaps = 55/619 (8%)
Query: 12 PEAVIKRFEQRDHEVDSR-GVVEYLRALVATNAITEYL--------------PDEQSGKP 56
PE VI+ FE + +R + EY++ALV + + + E+ G
Sbjct: 81 PERVIQIFESQPWLHSNRLALSEYVKALVKVDRLDDSTLLKTLRRGMAVSGGEGERVGSS 140
Query: 57 TTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKSRFAQELISTILFTV 116
+ L + A + T + L + P+H+V S F ++ T ++
Sbjct: 141 SALKS--------AGQATKDGILG---TANAPIHMV-----TSETGHFKDQIWRT-FRSL 183
Query: 117 AVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCD 175
A+ + + G AL + G G+G L++EV P + KT F DVKG D
Sbjct: 184 ALTFLVISGIGALIEDRGISKGLG--------------LSQEVQPIMDSKTKFSDVKGVD 229
Query: 176 DAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAG 235
+AK EL E+V YL++P +FT LGGKLPKG+LL G PGTGKT+LA+A+AGEAGVPFF +G
Sbjct: 230 EAKAELEEIVHYLRDPKRFTHLGGKLPKGVLLVGPPGTGKTMLARAVAGEAGVPFFSCSG 289
Query: 236 SEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK-QWEGHTKKTLHQLLVE 294
SEFEEMFVGVGARRVR LF AAKK++PCIIF+DEIDA+G +R + + + + TL+QLLVE
Sbjct: 290 SEFEEMFVGVGARRVRDLFAAAKKRSPCIIFMDEIDAIGGSRNPKDQQYMRMTLNQLLVE 349
Query: 295 MDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLA 354
+DGF+QNEGII++AATN P LD AL RPGRFDRHIVVPNPDV GR++ILE ++ +
Sbjct: 350 LDGFKQNEGIIVIAATNFPQSLDKALVRPGRFDRHIVVPNPDVEGRRQILESHMLKVLKS 409
Query: 355 DDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTM 414
DDVD+ IARGTPGF+GADLANLVN+AA+KAA+DG + +T +LE+AKDRI+MG+ERK+
Sbjct: 410 DDVDLMIIARGTPGFSGADLANLVNVAALKAAMDGAKAVTMNDLEYAKDRIMMGSERKSA 469
Query: 415 FISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQ 474
IS+ES+KLTAYHE GHA+VA +TEGA P+HKATI+PRG LGMV+QLP DETS S+KQ
Sbjct: 470 VISDESRKLTAYHEGGHALVAIHTEGARPVHKATIVPRGRTLGMVSQLPEKDETSFSRKQ 529
Query: 475 LLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIK-- 532
+LA LDV M GRVAEELIFG +T+GASSD +AT++A MV+ GMS +G V
Sbjct: 530 MLAWLDVSMAGRVAEELIFGDSEVTSGASSDFQNATKMARAMVTKYGMSKQLGFVSYNYE 589
Query: 533 -DRPSSEMQSR--IDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKR 589
D S ++R I+ EV LL AY+ K +L KH K+ H LA ALLE+ETL+ +IK+
Sbjct: 590 DDGKSMSTETRLLIEQEVKSLLENAYNNAKTILTKHSKEHHVLAQALLEHETLTGAQIKK 649
Query: 590 ILLPYREGQLPEQQEELEE 608
IL Q +QQE E
Sbjct: 650 ILAQANSTQ--QQQEHAVE 666
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 527 bits (1358), Expect = e-149, Method: Compositional matrix adjust.
Identities = 296/591 (50%), Positives = 380/591 (64%), Gaps = 39/591 (6%)
Query: 45 TEYLPDEQSGKPTTLPALLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVDPKVSNKS-- 102
++ L D +GK + Q + + + N P SE+ +V + V KS
Sbjct: 37 SQLLKDVDAGKIKSAEIAGQTVLAKTADNKTLTVNAPMNSEELVNRMVAKNADVKFKSGS 96
Query: 103 -RFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMP 161
F L+ + + VG VWL +Q G G G G S + E
Sbjct: 97 ISFLAILVQLLPILLVVG-VWLFLMRQMQG-----GAKGAMGFGKSKARLLTE------- 143
Query: 162 EKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKA 221
KN TF+DV G D+AK+EL EVV++LK+P+KF RLGGK+PKG LL G PGTGKTL+A+A
Sbjct: 144 NKNRITFEDVAGVDEAKEELQEVVDFLKDPAKFQRLGGKIPKGALLVGPPGTGKTLIARA 203
Query: 222 IAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWE 281
+AGEAGVPFF +GS+F EMFVGVGA RVR +F+ AKK APCIIFIDEIDAVG R
Sbjct: 204 VAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGL 263
Query: 282 G----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDV 337
G ++TL+QLLVEMDGFE NEGIIL+AATN PD+LDPAL RPGRFDR +VVPNPDV
Sbjct: 264 GGGNDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDV 323
Query: 338 RGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATE 397
GR++I+ +++++ PLA DVDVK +ARGTPGF+GADLANLVN AA+ AA +T +
Sbjct: 324 AGREKIIRVHMKNVPLAADVDVKTLARGTPGFSGADLANLVNEAALMAARKNRRMVTMQD 383
Query: 398 LEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALG 457
E AKD+++MG ER++M ++EE KKLTAYHE GHAIVA N A P+HKATI+PRG ALG
Sbjct: 384 FEQAKDKVMMGAERRSMAMNEEEKKLTAYHEGGHAIVALNVPLADPVHKATIVPRGRALG 443
Query: 458 MVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMV 517
MV QLP D S+ +Q+ +RL + MGGRVAEE+IFG+++IT+GASSD+ +AT+LA MV
Sbjct: 444 MVMQLPEGDRYSMKYQQMTSRLAIMMGGRVAEEIIFGKENITSGASSDIKAATDLARNMV 503
Query: 518 SNCGMSDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRVKALL 562
+ G SD +G V D S E ID+EV +L++ D + +L
Sbjct: 504 TRWGYSDILGTVAYGDNQDEVFLGHSVARTQNVSEETARLIDSEVKRLVQYGLDEARRIL 563
Query: 563 KKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPEQQEELEEDLVLA 613
LH L ALLEYETLS EEI IL +G P+++EE V+A
Sbjct: 564 TDKIDDLHTLGKALLEYETLSGEEIADIL----KGIPPKREEEEAATAVIA 610
>sp|O88967|YMEL1_MOUSE ATP-dependent zinc metalloprotease YME1L1 OS=Mus musculus GN=Yme1l1
PE=2 SV=1
Length = 715
Score = 517 bits (1332), Expect = e-146, Method: Compositional matrix adjust.
Identities = 261/433 (60%), Positives = 331/433 (76%), Gaps = 5/433 (1%)
Query: 163 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 222
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 276 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 334
Query: 223 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 282
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 335 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 394
Query: 283 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 340
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 395 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 341 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 400
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 455 TEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 401 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 460
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 515 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 574
Query: 461 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 520
LP +D + ++ QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 575 LLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 634
Query: 521 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 578
GMS+ +G + D + S E QS I+ E+ LLRE+Y+R K +LK H K+ LA ALL
Sbjct: 635 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLT 694
Query: 579 YETLSAEEIKRIL 591
YETL A+EI+ +L
Sbjct: 695 YETLDAKEIQIVL 707
>sp|Q925S8|YMEL1_RAT ATP-dependent zinc metalloprotease YME1L1 OS=Rattus norvegicus
GN=Yme1l1 PE=2 SV=1
Length = 715
Score = 516 bits (1329), Expect = e-145, Method: Compositional matrix adjust.
Identities = 261/433 (60%), Positives = 330/433 (76%), Gaps = 5/433 (1%)
Query: 163 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 222
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 276 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTVLGGKLPKGILLVGPPGTGKTLLARAV 334
Query: 223 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 282
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R ++
Sbjct: 335 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIEFPM 394
Query: 283 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 340
H +++T+ QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 395 HPYSRQTIIQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 454
Query: 341 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 400
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 455 TEILKWYLNKIKFDKSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 514
Query: 401 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 460
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 515 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 574
Query: 461 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 520
LP +D + + QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 575 LLPENDRWNEIRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 634
Query: 521 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 578
GMS+ +G + D + S E QS I+ E+ LLRE+Y+R K +LK H K+ LA ALL
Sbjct: 635 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLT 694
Query: 579 YETLSAEEIKRIL 591
YETL A+EI+ +L
Sbjct: 695 YETLDAKEIQIVL 707
>sp|Q96TA2|YMEL1_HUMAN ATP-dependent zinc metalloprotease YME1L1 OS=Homo sapiens GN=YME1L1
PE=1 SV=2
Length = 773
Score = 515 bits (1327), Expect = e-145, Method: Compositional matrix adjust.
Identities = 260/433 (60%), Positives = 331/433 (76%), Gaps = 5/433 (1%)
Query: 163 KNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAI 222
KNV TF+ VKG ++AKQEL EVVE+LKNP KFT LGGKLPKGILL G PGTGKTLLA+A+
Sbjct: 334 KNV-TFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAV 392
Query: 223 AGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG 282
AGEA VPF+Y +GSEF+EMFVGVGA R+R+LF+ AK APC+IFIDE+D+VG R +
Sbjct: 393 AGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPM 452
Query: 283 H--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGR 340
H +++T++QLL EMDGF+ NEG+I++ ATN P+ LD AL RPGRFD + VP PDV+GR
Sbjct: 453 HPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGR 512
Query: 341 QEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEF 400
EIL+ YL VD + IARGT GF+GA+L NLVN AA+KAAVDG E +T ELEF
Sbjct: 513 TEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEF 572
Query: 401 AKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVT 460
+KD+ILMG ER+++ I ++K +TAYHESGHAI+A+ T+ A PI+KATIMPRG LG V+
Sbjct: 573 SKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVS 632
Query: 461 QLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNC 520
LP +D + ++ QLLA++DV MGGRVAEELIFG DHITTGASSD +AT++A MV+
Sbjct: 633 LLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKF 692
Query: 521 GMSDAIGPVHIKD--RPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLE 578
GMS+ +G + D + S E QS I+ E+ LLR++Y+R K +LK H K+ LA ALL
Sbjct: 693 GMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLT 752
Query: 579 YETLSAEEIKRIL 591
YETL A+EI+ +L
Sbjct: 753 YETLDAKEIQIVL 765
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 505 bits (1300), Expect = e-142, Method: Compositional matrix adjust.
Identities = 286/614 (46%), Positives = 382/614 (62%), Gaps = 59/614 (9%)
Query: 3 LVILFSLFSPEAVIKRFEQRDHEVDSRGVVEYLRALVATNAITEYLP--DEQSGKPTTLP 60
L++LFS F+ + + S G V Y +E+L D K T+
Sbjct: 18 LIVLFSFFNG----------NRQRASNGEVSY----------SEFLQKIDNNELKTVTIQ 57
Query: 61 A--LLQELQHRASRNTNEPFLNPGVSEKQPLHVVMVD--PKVSNKSRFAQELISTILFTV 116
L + R +T P +PG+ ++ + V + P+ S S F L S + +
Sbjct: 58 GQKLTGQTADRRMISTYAP-RDPGLVQRLNTNKVNIRAVPESSGNSIFLNLLFSLLPVLI 116
Query: 117 AVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDD 176
VG W+ +Q G G G G S + E V TFKDV G ++
Sbjct: 117 IVG-AWIFFMRQMQG-----GSRGALGFGKSKAKLLTEAQGRV-------TFKDVAGVEE 163
Query: 177 AKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGS 236
AKQ+L E+V++L+ P KF RLGG++P+G+LL G PGTGKTLLA++IAGEA VPFF +GS
Sbjct: 164 AKQDLQEIVDFLREPQKFQRLGGRIPRGVLLVGPPGTGKTLLARSIAGEANVPFFTISGS 223
Query: 237 EFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLL 292
+F EMFVGVGA RVR +F+ AKK APCIIFIDEIDAVG R G ++TL+QLL
Sbjct: 224 DFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLL 283
Query: 293 VEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKP 352
VEMDGFE NE IIL+AATN PD+LDPAL RPGRFDR +VVPNPDV GR++ILE+++++ P
Sbjct: 284 VEMDGFEPNESIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVAGREKILEVHVRNVP 343
Query: 353 LADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERK 412
LA +V+++ +ARGTPGF+GADL NLVN AA+ AA + +T E E AKD+++MG ER+
Sbjct: 344 LAPNVNLRVLARGTPGFSGADLMNLVNEAALMAASRNKKVVTMQEFEDAKDKVMMGAERR 403
Query: 413 TMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQ 472
+ +++E K+LTAYHE+GHAIVA N + P+HKATI+PRG ALGMV QLP D S+S
Sbjct: 404 STAMTQEEKELTAYHEAGHAIVALNVPVSDPVHKATIVPRGRALGMVMQLPEGDRYSMSY 463
Query: 473 KQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIK 532
+++RL + MGGRVAEEL FG+++IT+GA+SD+ AT+LA M++ G SD +G V
Sbjct: 464 LWMVSRLAIMMGGRVAEELKFGKENITSGAASDIEQATKLARAMITRWGFSDMLGHVAYG 523
Query: 533 DRP---------------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALL 577
D S E IDAEV +L+ +AY +LK KQ ALA LL
Sbjct: 524 DNQDEIFLGHSVARTQNISEETARMIDAEVRRLIDDAYKTATKILKTQNKQWLALAQGLL 583
Query: 578 EYETLSAEEIKRIL 591
EYETL+ EI ++
Sbjct: 584 EYETLTGTEINEVI 597
>sp|O59824|YME1_SCHPO ATP-dependent zinc metalloprotease YME1 homolog
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC965.04c PE=3 SV=1
Length = 709
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 257/519 (49%), Positives = 360/519 (69%), Gaps = 25/519 (4%)
Query: 82 GVSEKQPLHVVMVDPKVSNKSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGT 141
G S K P++VV+ +P+ + R +F GL ++ Y LG
Sbjct: 195 GTSSKTPVYVVVDEPRFTKFFR---------IFKFIAGL-------SVASYFVLLGMSIF 238
Query: 142 SGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGK 200
+ ++ +E M E+ + F DV+G D+AK+EL E+V++L++P+ FTRLGGK
Sbjct: 239 AETSGLNNIMTNTTEQEPMEERAINVRFSDVQGVDEAKEELEEIVDFLRDPTHFTRLGGK 298
Query: 201 LPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKK 260
LP+G+LLTG PGTGKT+LA+A+AGEA VPFF+ +GS+F+EM+VGVGA+RVR LF AA+K+
Sbjct: 299 LPRGVLLTGPPGTGKTMLARAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQ 358
Query: 261 APCIIFIDEIDAVGSTRKQWEG-HTKKTLHQLLVEMDGFEQNEG----IILMAATNLPDI 315
AP IIFIDE+DA+G R + H ++TL+QLLV++DGF +NE ++ + ATN P+
Sbjct: 359 APSIIFIDELDAIGQKRNARDAAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPES 418
Query: 316 LDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLA 375
LDPALTRPGRFDRHI VP PDVRGR IL + + PL DVD+ IARGT GF GADLA
Sbjct: 419 LDPALTRPGRFDRHIHVPLPDVRGRLAILLQHTRHVPLGKDVDLSIIARGTSGFAGADLA 478
Query: 376 NLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVA 435
NL+N AA+ A+ + ++ +LE++KDRILMG ERK+ FI+ E+K +TAYHE GHA+VA
Sbjct: 479 NLINQAAVYASKNLSTAVSMRDLEWSKDRILMGAERKSAFITPENKLMTAYHEGGHALVA 538
Query: 436 FNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGR 495
T+ A +KATIMPRGS+LGM LP D+ S ++++ LA LDV MGGR AEEL++G+
Sbjct: 539 LFTKNAMRPYKATIMPRGSSLGMTISLPDMDKDSWTREEYLAMLDVTMGGRAAEELLYGK 598
Query: 496 DHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIK---DRPSSEMQSRIDAEVVKLLR 552
D IT+GA +D+ AT++A MV+ GMSD IGPV ++ D S ++ +++E+ LL
Sbjct: 599 DKITSGAHNDIDKATQVARRMVTEFGMSDRIGPVSLEAEMDNLSPATRALVESEIKSLLE 658
Query: 553 EAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 591
+Y+R +LLK H+K+L ALA AL++YE L+AEE+ R++
Sbjct: 659 ASYERSLSLLKSHKKELDALATALVDYEFLTAEEMNRVV 697
>sp|P32795|YME1_YEAST Mitochondrial inner membrane i-AAA protease supercomplex subunit
YME1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=YME1 PE=1 SV=1
Length = 747
Score = 494 bits (1272), Expect = e-139, Method: Compositional matrix adjust.
Identities = 252/514 (49%), Positives = 359/514 (69%), Gaps = 25/514 (4%)
Query: 84 SEKQPLHVVMVDPKVSNKSRFAQELI--STILFTVAVGLVWLMGAAALQKYIGSLGGIGT 141
S K+PLHVV+ + + SR+ + L+ + ++ + G ++ L K
Sbjct: 213 SRKEPLHVVVSESTFTVVSRWVKWLLVFGILTYSFSEGFKYITENTTLLK---------- 262
Query: 142 SGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKL 201
SS A K ++ + + NVK F DV GCD+A+ EL E+V++LK+P+K+ LGGKL
Sbjct: 263 -----SSEVADKSVD---VAKTNVK-FDDVCGCDEARAELEEIVDFLKDPTKYESLGGKL 313
Query: 202 PKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 261
PKG+LLTG PGTGKTLLA+A AGEAGV FF+ +GSEF+E++VGVGA+R+R LF A+ +A
Sbjct: 314 PKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRA 373
Query: 262 PCIIFIDEIDAVGSTRK-QWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPAL 320
P IIFIDE+DA+G R + + + K+TL+QLLVE+DGF Q GII++ ATN P+ LD AL
Sbjct: 374 PAIIFIDELDAIGGKRNPKDQAYAKQTLNQLLVELDGFSQTSGIIIIGATNFPEALDKAL 433
Query: 321 TRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNI 380
TRPGRFD+ + V PDVRGR +IL+ +++ LAD+VD IARGTPG +GA+LANLVN
Sbjct: 434 TRPGRFDKVVNVDLPDVRGRADILKHHMKKITLADNVDPTIIARGTPGLSGAELANLVNQ 493
Query: 381 AAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEG 440
AA+ A + + E+AKD+ILMG ERKTM +++ ++K TA+HE+GHAI+A T G
Sbjct: 494 AAVYACQKNAVSVDMSHFEWAKDKILMGAERKTMVLTDAARKATAFHEAGHAIMAKYTNG 553
Query: 441 AHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITT 500
A P++KATI+PRG ALG+ QLP D+ +++++ ARLDVCMGG++AEELI+G+D+ T+
Sbjct: 554 ATPLYKATILPRGRALGITFQLPEMDKVDITKRECQARLDVCMGGKIAEELIYGKDNTTS 613
Query: 501 GASSDLHSATELAHYMVSNCGMSDAIGPVHIKDR---PSSEMQSRIDAEVVKLLREAYDR 557
G SDL SAT A MV+ GMSD +GPV++ + S++++ D EV++LL+++ +R
Sbjct: 614 GCGSDLQSATGTARAMVTQYGMSDDVGPVNLSENWESWSNKIRDIADNEVIELLKDSEER 673
Query: 558 VKALLKKHEKQLHALANALLEYETLSAEEIKRIL 591
+ LL K +LH LA L+EYETL A EI+++
Sbjct: 674 ARRLLTKKNVELHRLAQGLIEYETLDAHEIEQVC 707
>sp|Q4UN68|FTSH_RICFE ATP-dependent zinc metalloprotease FtsH OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=ftsH PE=3 SV=1
Length = 635
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/442 (55%), Positives = 323/442 (73%), Gaps = 18/442 (4%)
Query: 167 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 226
TFKDV G D+AK+EL E+V++L++PSKF +LGGK+PKG LL G PGTGKTLLAKAIAGEA
Sbjct: 153 TFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEA 212
Query: 227 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 282
VPFF +GS+F EMFVGVGA RVR +F+ K+ APCIIFIDEIDAVG R G
Sbjct: 213 NVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGND 272
Query: 283 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 342
++TL+Q+LVEMDGFE NEG++++AATN PD+LD AL RPGRFDR I V NPD+ GR++
Sbjct: 273 EREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQ 332
Query: 343 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 402
IL+++L+ V + IARGTPGF+GA+LANLVN AA+ AA G +++ ++E AK
Sbjct: 333 ILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAK 392
Query: 403 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 462
D++LMG R+++ +SE+ K+LTAYHE GHA+V A P+HKATI+PRG+ALGMV +L
Sbjct: 393 DKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPLHKATIIPRGNALGMVQRL 452
Query: 463 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 522
P +DE S +++Q+ + + V M GRVAEE+IFGR+ +T+GASSD+ AT +A MV+ G+
Sbjct: 453 PETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGL 512
Query: 523 SDAIGPVHIKDRPSSEMQSR-------------IDAEVVKLLREAYDRVKALLKKHEKQL 569
SD IGP+ S +M R IDAEV K++ + Y+ K +L KH QL
Sbjct: 513 SDLIGPI-FHGSSSDDMYGRQPSNETSEATAELIDAEVKKIITQGYEFAKDILTKHIDQL 571
Query: 570 HALANALLEYETLSAEEIKRIL 591
H LANAL+EYETLS ++IK +L
Sbjct: 572 HTLANALIEYETLSGQQIKNLL 593
>sp|Q9ZEA2|FTSH_RICPR ATP-dependent zinc metalloprotease FtsH OS=Rickettsia prowazekii
(strain Madrid E) GN=ftsH PE=3 SV=1
Length = 637
Score = 488 bits (1257), Expect = e-137, Method: Compositional matrix adjust.
Identities = 245/442 (55%), Positives = 323/442 (73%), Gaps = 18/442 (4%)
Query: 167 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 226
TFKDV G D+AK+EL E+V++L++PSKF +LGGK+PKG LL G PGTGKTLLAKAIAGEA
Sbjct: 153 TFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEA 212
Query: 227 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 282
VPFF +GS+F EMFVGVGA RVR +F+ K+ APCIIFIDEIDAVG R G
Sbjct: 213 NVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGND 272
Query: 283 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 342
++TL+Q+LVEMDGFE NEG++++AATN PD+LD AL RPGRFDR I V NPD+ GR++
Sbjct: 273 EREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQ 332
Query: 343 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 402
IL+++L+ V + IARGTPGF+GA+LANLVN AA+ AA G +++ ++E AK
Sbjct: 333 ILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAK 392
Query: 403 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 462
D++LMG R+++ +SE+ K+LTAYHE GHA+V A PIHKATI+PRG+ALGMV +L
Sbjct: 393 DKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRL 452
Query: 463 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 522
P +DE S +++Q+ + + V M GRVAEE+IFGR+ +T+GASSD+ AT +A MV+ G+
Sbjct: 453 PETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGL 512
Query: 523 SDAIGPVHIKDRPSSEMQSR-------------IDAEVVKLLREAYDRVKALLKKHEKQL 569
SD IGP+ S +M R IDAEV +++ + Y+ K +L KH QL
Sbjct: 513 SDLIGPI-FHGSNSDDMYGRQSSNEISEATAELIDAEVKRIITQGYEFAKDILTKHIDQL 571
Query: 570 HALANALLEYETLSAEEIKRIL 591
H LANAL+EYETLS ++IK +L
Sbjct: 572 HTLANALIEYETLSGQQIKNLL 593
>sp|Q92JJ9|FTSH_RICCN ATP-dependent zinc metalloprotease FtsH OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=ftsH PE=3 SV=1
Length = 637
Score = 488 bits (1255), Expect = e-137, Method: Compositional matrix adjust.
Identities = 244/441 (55%), Positives = 324/441 (73%), Gaps = 16/441 (3%)
Query: 167 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 226
TFKDV G D+AK+EL E+V++L++PSKF +LGGK+PKG LL G PGTGKTLLAKAIAGEA
Sbjct: 153 TFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEA 212
Query: 227 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 282
VPFF +GS+F EMFVGVGA RVR +F+ K+ APCIIFIDEIDAVG R G
Sbjct: 213 NVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGND 272
Query: 283 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 342
++TL+Q+LVEMDGFE NEG++++AATN PD+LD AL RPGRFDR I V NPD+ GR++
Sbjct: 273 EREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQ 332
Query: 343 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 402
IL+++L+ V + IARGTPGF+GA+LANLVN AA+ AA G +++ ++E AK
Sbjct: 333 ILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAK 392
Query: 403 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 462
D++LMG R+++ +SE+ K+LTAYHE GHA+V A PIHKATI+PRG+ALGMV +L
Sbjct: 393 DKVLMGVARRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRL 452
Query: 463 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 522
P +DE S +++Q+ + + V M GRVAEE+IFGR+ +T+GASSD+ AT +A MV+ G+
Sbjct: 453 PETDEYSQNREQMESSIAVYMAGRVAEEIIFGRNKVTSGASSDIKGATNIARAMVTKAGL 512
Query: 523 SDAIGPVH--------IKDRPSSEMQSR----IDAEVVKLLREAYDRVKALLKKHEKQLH 570
SD IGP+ +P++E IDAEV +++ + Y+ K +L KH QLH
Sbjct: 513 SDLIGPIFHGSSGDDMYGRQPNNETSEATAELIDAEVKRIITQGYEFAKDILTKHIDQLH 572
Query: 571 ALANALLEYETLSAEEIKRIL 591
LANAL+EYETLS ++IK +L
Sbjct: 573 TLANALIEYETLSGQQIKNLL 593
>sp|Q68XR9|FTSH_RICTY ATP-dependent zinc metalloprotease FtsH OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=ftsH PE=3 SV=1
Length = 637
Score = 487 bits (1253), Expect = e-136, Method: Compositional matrix adjust.
Identities = 244/442 (55%), Positives = 323/442 (73%), Gaps = 18/442 (4%)
Query: 167 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 226
TFKDV G D+AK+EL E+V++L++PSKF +LGGK+PKG LL G PGTGKTLLAKAIAGEA
Sbjct: 153 TFKDVAGIDEAKEELTEIVDFLRDPSKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEA 212
Query: 227 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 282
VPFF +GS+F EMFVGVGA RVR +F+ K+ APCIIFIDEIDAVG R G
Sbjct: 213 NVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEIDAVGRHRGIGMGGGND 272
Query: 283 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 342
++TL+Q+LVEMDGFE NEG++++AATN PD+LD AL RPGRFDR I V NPD+ GR++
Sbjct: 273 EREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDRALLRPGRFDRQIAVANPDINGREQ 332
Query: 343 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 402
IL+++L+ V + IARGTPGF+GA+LANLVN AA+ AA G +++ ++E AK
Sbjct: 333 ILKVHLKKIKYNSTVLARIIARGTPGFSGAELANLVNEAALIAARLGKKEVDMHDMEEAK 392
Query: 403 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 462
D++LMG R+++ +SE+ K+LTAYHE GHA+V A PIHKATI+PRG+ALGMV +L
Sbjct: 393 DKVLMGVVRRSIAMSEKEKRLTAYHEGGHALVGLYCPAASPIHKATIIPRGNALGMVQRL 452
Query: 463 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 522
P +DE S +++Q+ + + V M GRVAEE+IFG++ +T+GA+SD+ AT +A MV+ G+
Sbjct: 453 PETDEYSQNREQMESSIAVYMAGRVAEEIIFGKNKVTSGAASDIKGATNIARAMVTKAGL 512
Query: 523 SDAIGPVHIKDRPSSEMQSR-------------IDAEVVKLLREAYDRVKALLKKHEKQL 569
SD IGP+ S +M R IDAEV K++ + Y+ K +L KH QL
Sbjct: 513 SDLIGPI-FHGSSSDDMYGRQQSNEISEATAKLIDAEVKKIITQGYEFAKDILTKHIDQL 571
Query: 570 HALANALLEYETLSAEEIKRIL 591
H LANAL+EYETLS ++IK +L
Sbjct: 572 HTLANALIEYETLSGQQIKNLL 593
>sp|C8WEG0|FTSH_ZYMMN ATP-dependent zinc metalloprotease FtsH OS=Zymomonas mobilis subsp.
mobilis (strain NCIB 11163) GN=ftsH PE=3 SV=1
Length = 662
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 241/444 (54%), Positives = 325/444 (73%), Gaps = 19/444 (4%)
Query: 167 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 226
TFKD+ G ++A++EL E+V++LK+P++F+RLGGK+PKG LL G PGTGKTLLA+AIAGEA
Sbjct: 177 TFKDIAGIEEAREELEEIVDFLKDPTRFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEA 236
Query: 227 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGH--- 283
GVPFF +GS+F EMFVGVGA RVR +F+ AKK APCIIFIDEIDAVG R G+
Sbjct: 237 GVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGNGND 296
Query: 284 -TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 342
++TL+QLLVEMDGFE NEGII++AATN PD+LDPAL RPGRFDR ++VP PD+ GR +
Sbjct: 297 EREQTLNQLLVEMDGFEANEGIIILAATNRPDVLDPALLRPGRFDRQVIVPRPDIEGRLK 356
Query: 343 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 402
IL+++++ PLA DVDV+ IARGTPGF+GADLAN+VN AA+ AA G + +E E AK
Sbjct: 357 ILQVHMKKTPLAPDVDVRTIARGTPGFSGADLANIVNEAALLAARKGKRLVAMSEFEEAK 416
Query: 403 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 462
D+++MG ER+++ ++EE K+ TAYHE+GHA+V+ + G P+HK T++PRG ALG+ L
Sbjct: 417 DKVMMGAERRSVIMTEEEKRSTAYHEAGHALVSLHIPGCDPLHKVTVIPRGRALGVTWNL 476
Query: 463 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 522
P D+ S++ KQ+ ARL +C GGR+AE+L++G D + TGAS+D+ AT++A MV+ GM
Sbjct: 477 PERDQLSINIKQMKARLALCFGGRIAEQLVYGEDSLNTGASNDIQQATDMARAMVTEYGM 536
Query: 523 SDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEK 567
S +G + ++ S + ID EV L+ E R + +L +H
Sbjct: 537 SPKLGWLRYRENQDEVFLGHSVSRSQNISEDTAKIIDQEVRVLVEEGESRARQVLTEHID 596
Query: 568 QLHALANALLEYETLSAEEIKRIL 591
+LH LANAL+EYETLS EE KR +
Sbjct: 597 ELHRLANALIEYETLSGEEAKRAI 620
>sp|C6V4R9|FTSH_NEORI ATP-dependent zinc metalloprotease FtsH OS=Neorickettsia risticii
(strain Illinois) GN=ftsH PE=3 SV=1
Length = 636
Score = 482 bits (1240), Expect = e-135, Method: Compositional matrix adjust.
Identities = 254/495 (51%), Positives = 337/495 (68%), Gaps = 24/495 (4%)
Query: 108 LISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKT 167
LIS + +G VW+ +Q GG T G S + + + +V T
Sbjct: 109 LISWFPMLLLIG-VWIFFMKQMQA-----GGNKTMTFGKSKARLLSDRSNKV-------T 155
Query: 168 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 227
F DV G D+AK+EL E+VE+L+ P KF +LGGK+PKG LL G PGTGKTLLAKAIAGEA
Sbjct: 156 FHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAGEAK 215
Query: 228 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG----H 283
VPFF +GS+F EMFVGVGA RVR +F+ KK APC+IFIDEIDAVG R G
Sbjct: 216 VPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEIDAVGRHRGVGFGGGNDE 275
Query: 284 TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEI 343
++TL+QLLVEMDGFE NEG+I++AATN PD+LDPAL RPGRFDR I + PD+ GRQ+I
Sbjct: 276 REQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALLRPGRFDRQITISIPDIAGRQKI 335
Query: 344 LELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKD 403
LE++L+ P A +V+V IARGTPGF+GADLANLVN +A+ AA + +T + E+A+D
Sbjct: 336 LEVHLKKIPTAPNVEVSIIARGTPGFSGADLANLVNESALIAARRNKKVVTNEDFEYARD 395
Query: 404 RILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLP 463
+ILMG ERK++ + EE K LTAYHE+GHA+ + E + PIHKATI+PRG ALG+V +LP
Sbjct: 396 KILMGMERKSLVMREEEKLLTAYHEAGHAVTSLKLEASDPIHKATIIPRGRALGLVMRLP 455
Query: 464 SSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMS 523
D S ++ ++ A L V MGGR AE++IFG D T+GA+SD+ AT LA MV+ GMS
Sbjct: 456 EHDRVSFTRAKMHADLIVAMGGRAAEQVIFGDDKTTSGAASDIKQATHLARSMVTKWGMS 515
Query: 524 DAIGPVHIKDRP-------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANAL 576
+ +GP+ ++ S EM + ID+EV +L+ +A +L ++ + LH +A AL
Sbjct: 516 EKVGPLLYGEQNDPNNHILSIEMSNLIDSEVKQLITDALKEATKILNENIESLHRIAKAL 575
Query: 577 LEYETLSAEEIKRIL 591
LEYETL+ +E+ +L
Sbjct: 576 LEYETLTGQELSDLL 590
>sp|Q1RGP0|FTSH_RICBR ATP-dependent zinc metalloprotease FtsH OS=Rickettsia bellii
(strain RML369-C) GN=ftsH PE=3 SV=1
Length = 638
Score = 481 bits (1237), Expect = e-134, Method: Compositional matrix adjust.
Identities = 257/519 (49%), Positives = 346/519 (66%), Gaps = 35/519 (6%)
Query: 92 VMVDPKVSNKSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYA 151
+ V P + + F LIS + +G VW+ + GG G G S +
Sbjct: 92 IEVVPPETRMNTFLSFLISWFPMLLLIG-VWVFFMRQMH------GGGKAMGFGKSKA-- 142
Query: 152 PKELNKEVMPEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGA 210
+++ +K K TFKDV G D+AK EL E+V++L++PSKF +LGGK+PKG LL G
Sbjct: 143 ------KLLSDKGPKITFKDVAGIDEAKDELTEIVDFLRDPSKFQKLGGKIPKGCLLIGP 196
Query: 211 PGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEI 270
PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+ K+ APCIIFIDEI
Sbjct: 197 PGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDEI 256
Query: 271 DAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRF 326
DAVG R G ++TL+Q+LVEMDGFE NEG++++AATN PD+LD AL RPGRF
Sbjct: 257 DAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDNALLRPGRF 316
Query: 327 DRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAA 386
DR I V NPD+ GR++IL+++L+ + + + IARGTPGF+GA+LANLVN A + AA
Sbjct: 317 DRQITVSNPDIDGREKILQVHLKKVKYSTKIVPRIIARGTPGFSGAELANLVNEATLIAA 376
Query: 387 VDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHK 446
+++ +LE AKD+++MG ER++M +S+E KKLTAYHE GHA+V + PIHK
Sbjct: 377 RRNKKEVEMHDLEEAKDKVMMGVERRSMIMSDEQKKLTAYHEGGHALVGLYCLASDPIHK 436
Query: 447 ATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDL 506
ATI+PRG ALGMV +LP +D S+ + ++ A + V M GRVAEE+IFG++ +T+GASSD+
Sbjct: 437 ATIIPRGRALGMVMRLPENDRFSMPRDKMEADIAVAMAGRVAEEIIFGKEKVTSGASSDI 496
Query: 507 HSATELAHYMVSNCGMSDAIGPVHIKDRPSSEMQSR--------------IDAEVVKLLR 552
AT +A MV++ G+SD +GPV+ S +M + ID EV K++
Sbjct: 497 KMATRMAKAMVTDWGLSDKVGPVY-HGSASEDMYTNRNSSSDRSESTSELIDEEVKKIVT 555
Query: 553 EAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 591
YD K +L KH QLH LA AL+EYETLS ++IK +L
Sbjct: 556 TGYDLAKDILTKHLDQLHILAKALIEYETLSGQQIKNLL 594
>sp|P0AAI4|FTSH_SHIFL ATP-dependent zinc metalloprotease FtsH OS=Shigella flexneri
GN=ftsH PE=3 SV=1
Length = 644
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 272/609 (44%), Positives = 372/609 (61%), Gaps = 54/609 (8%)
Query: 37 ALVATNAITEYLPDEQSGKPTTLPALLQEL---QHRASR-NTNEPFLNPGVSEKQPLHVV 92
A+V + + P E +G+ LQE+ Q R +R N E + S + ++
Sbjct: 12 AVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIP 71
Query: 93 MVDPKVSNK----------------SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSL 136
+ DPK+ + S A IS + +G VW+ +Q
Sbjct: 72 VQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIG-VWIFFMRQMQ----GG 126
Query: 137 GGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFT 195
GG G G S + ++ E +KT F DV GCD+AK+E+ E+VEYL+ PS+F
Sbjct: 127 GGKGAMSFGKSKA--------RMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 196 RLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQ 255
+LGGK+PKG+L+ G PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 256 AAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATN 311
AKK APCIIFIDEIDAVG R G ++TL+Q+LVEMDGFE NEGII++AATN
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 298
Query: 312 LPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNG 371
PD+LDPAL RPGRFDR +VV PDVRGR++IL+++++ PLA D+D IARGTPGF+G
Sbjct: 299 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSG 358
Query: 372 ADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGH 431
ADLANLVN AA+ AA ++ E E AKD+I+MG ER++M ++E K+ TAYHE+GH
Sbjct: 359 ADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGH 418
Query: 432 AIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEEL 491
AI+ P+HK TI+PRG ALG+ LP D S S+++L +++ GGR+AEE+
Sbjct: 419 AIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEI 478
Query: 492 IFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------S 536
I+G +H++TGAS+D+ AT LA MV+ G S+ +GP+ + S
Sbjct: 479 IYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538
Query: 537 SEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYRE 596
E ID EV L+ Y+R + LL + LHA+ +AL++YET+ A +I L+ R+
Sbjct: 539 DETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDD-LMARRD 597
Query: 597 GQLPEQQEE 605
+ P EE
Sbjct: 598 VRPPAGWEE 606
>sp|P0AAI3|FTSH_ECOLI ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli (strain
K12) GN=ftsH PE=1 SV=1
Length = 644
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 272/609 (44%), Positives = 372/609 (61%), Gaps = 54/609 (8%)
Query: 37 ALVATNAITEYLPDEQSGKPTTLPALLQEL---QHRASR-NTNEPFLNPGVSEKQPLHVV 92
A+V + + P E +G+ LQE+ Q R +R N E + S + ++
Sbjct: 12 AVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIP 71
Query: 93 MVDPKVSNK----------------SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSL 136
+ DPK+ + S A IS + +G VW+ +Q
Sbjct: 72 VQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIG-VWIFFMRQMQ----GG 126
Query: 137 GGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFT 195
GG G G S + ++ E +KT F DV GCD+AK+E+ E+VEYL+ PS+F
Sbjct: 127 GGKGAMSFGKSKA--------RMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 196 RLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQ 255
+LGGK+PKG+L+ G PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 256 AAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATN 311
AKK APCIIFIDEIDAVG R G ++TL+Q+LVEMDGFE NEGII++AATN
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 298
Query: 312 LPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNG 371
PD+LDPAL RPGRFDR +VV PDVRGR++IL+++++ PLA D+D IARGTPGF+G
Sbjct: 299 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSG 358
Query: 372 ADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGH 431
ADLANLVN AA+ AA ++ E E AKD+I+MG ER++M ++E K+ TAYHE+GH
Sbjct: 359 ADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGH 418
Query: 432 AIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEEL 491
AI+ P+HK TI+PRG ALG+ LP D S S+++L +++ GGR+AEE+
Sbjct: 419 AIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEI 478
Query: 492 IFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------S 536
I+G +H++TGAS+D+ AT LA MV+ G S+ +GP+ + S
Sbjct: 479 IYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538
Query: 537 SEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYRE 596
E ID EV L+ Y+R + LL + LHA+ +AL++YET+ A +I L+ R+
Sbjct: 539 DETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDD-LMARRD 597
Query: 597 GQLPEQQEE 605
+ P EE
Sbjct: 598 VRPPAGWEE 606
>sp|Q8X9L0|FTSH_ECO57 ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli O157:H7
GN=ftsH PE=3 SV=1
Length = 644
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 272/609 (44%), Positives = 372/609 (61%), Gaps = 54/609 (8%)
Query: 37 ALVATNAITEYLPDEQSGKPTTLPALLQEL---QHRASR-NTNEPFLNPGVSEKQPLHVV 92
A+V + + P E +G+ LQE+ Q R +R N E + S + ++
Sbjct: 12 AVVLMSVFQSFGPSESNGRKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIP 71
Query: 93 MVDPKVSNK----------------SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSL 136
+ DPK+ + S A IS + +G VW+ +Q
Sbjct: 72 VQDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIG-VWIFFMRQMQ----GG 126
Query: 137 GGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFT 195
GG G G S + ++ E +KT F DV GCD+AK+E+ E+VEYL+ PS+F
Sbjct: 127 GGKGAMSFGKSKA--------RMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 196 RLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQ 255
+LGGK+PKG+L+ G PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 256 AAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATN 311
AKK APCIIFIDEIDAVG R G ++TL+Q+LVEMDGFE NEGII++AATN
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 298
Query: 312 LPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNG 371
PD+LDPAL RPGRFDR +VV PDVRGR++IL+++++ PLA D+D IARGTPGF+G
Sbjct: 299 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLAPDIDAAIIARGTPGFSG 358
Query: 372 ADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGH 431
ADLANLVN AA+ AA ++ E E AKD+I+MG ER++M ++E K+ TAYHE+GH
Sbjct: 359 ADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGH 418
Query: 432 AIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEEL 491
AI+ P+HK TI+PRG ALG+ LP D S S+++L +++ GGR+AEE+
Sbjct: 419 AIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEI 478
Query: 492 IFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------S 536
I+G +H++TGAS+D+ AT LA MV+ G S+ +GP+ + S
Sbjct: 479 IYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538
Query: 537 SEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYRE 596
E ID EV L+ Y+R + LL + LHA+ +AL++YET+ A +I L+ R+
Sbjct: 539 DETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDD-LMARRD 597
Query: 597 GQLPEQQEE 605
+ P EE
Sbjct: 598 VRPPAGWEE 606
>sp|P63343|FTSH_SALTY ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ftsH PE=3 SV=1
Length = 644
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/609 (44%), Positives = 372/609 (61%), Gaps = 54/609 (8%)
Query: 37 ALVATNAITEYLPDEQSGKPTTLPALLQEL---QHRASR-NTNEPFLNPGVSEKQPLHVV 92
A+V + + P E +G+ LQE+ Q R +R N E + S + ++
Sbjct: 12 AVVLMSVFQSFGPSESNGRKVDYSTFLQEVNQDQVREARINGREINVTKKDSNRYTTYIP 71
Query: 93 MVDPKVSNK----------------SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSL 136
+ DPK+ + S A IS + +G VW+ +Q
Sbjct: 72 INDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIG-VWIFFMRQMQ----GG 126
Query: 137 GGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFT 195
GG G G S + ++ E +KT F DV GCD+AK+E+ E+VEYL+ PS+F
Sbjct: 127 GGKGAMSFGKSKA--------RMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 196 RLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQ 255
+LGGK+PKG+L+ G PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 256 AAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATN 311
AKK APCIIFIDEIDAVG R G ++TL+Q+LVEMDGFE NEGII++AATN
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 298
Query: 312 LPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNG 371
PD+LDPAL RPGRFDR +VV PDVRGR++IL+++++ PLA D+D IARGTPGF+G
Sbjct: 299 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSG 358
Query: 372 ADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGH 431
ADLANLVN AA+ AA ++ E E AKD+I+MG ER++M ++E K+ TAYHE+GH
Sbjct: 359 ADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGH 418
Query: 432 AIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEEL 491
AI+ P+HK TI+PRG ALG+ LP D S S+++L +++ GGR+AEE+
Sbjct: 419 AIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEI 478
Query: 492 IFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------S 536
I+G +H++TGAS+D+ AT LA MV+ G S+ +GP+ + S
Sbjct: 479 IYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538
Query: 537 SEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYRE 596
E ID EV L+ Y+R + +L + LHA+ +AL++YET+ A +I L+ RE
Sbjct: 539 DETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDD-LMARRE 597
Query: 597 GQLPEQQEE 605
+ P E+
Sbjct: 598 VRPPAGWED 606
>sp|P63344|FTSH_SALTI ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhi GN=ftsH
PE=3 SV=1
Length = 644
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 271/609 (44%), Positives = 372/609 (61%), Gaps = 54/609 (8%)
Query: 37 ALVATNAITEYLPDEQSGKPTTLPALLQEL---QHRASR-NTNEPFLNPGVSEKQPLHVV 92
A+V + + P E +G+ LQE+ Q R +R N E + S + ++
Sbjct: 12 AVVLMSVFQSFGPSESNGRKVDYSTFLQEVNQDQVREARINGREINVTKKDSNRYTTYIP 71
Query: 93 MVDPKVSNK----------------SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSL 136
+ DPK+ + S A IS + +G VW+ +Q
Sbjct: 72 INDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIG-VWIFFMRQMQ----GG 126
Query: 137 GGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFT 195
GG G G S + ++ E +KT F DV GCD+AK+E+ E+VEYL+ PS+F
Sbjct: 127 GGKGAMSFGKSKA--------RMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQ 178
Query: 196 RLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQ 255
+LGGK+PKG+L+ G PGTGKTLLAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+
Sbjct: 179 KLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFE 238
Query: 256 AAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATN 311
AKK APCIIFIDEIDAVG R G ++TL+Q+LVEMDGFE NEGII++AATN
Sbjct: 239 QAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATN 298
Query: 312 LPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNG 371
PD+LDPAL RPGRFDR +VV PDVRGR++IL+++++ PLA D+D IARGTPGF+G
Sbjct: 299 RPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSG 358
Query: 372 ADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGH 431
ADLANLVN AA+ AA ++ E E AKD+I+MG ER++M ++E K+ TAYHE+GH
Sbjct: 359 ADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGH 418
Query: 432 AIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEEL 491
AI+ P+HK TI+PRG ALG+ LP D S S+++L +++ GGR+AEE+
Sbjct: 419 AIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEI 478
Query: 492 IFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------S 536
I+G +H++TGAS+D+ AT LA MV+ G S+ +GP+ + S
Sbjct: 479 IYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538
Query: 537 SEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYRE 596
E ID EV L+ Y+R + +L + LHA+ +AL++YET+ A +I L+ RE
Sbjct: 539 DETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDD-LMARRE 597
Query: 597 GQLPEQQEE 605
+ P E+
Sbjct: 598 VRPPAGWED 606
>sp|A0L4S0|FTSH_MAGSM ATP-dependent zinc metalloprotease FtsH OS=Magnetococcus sp.
(strain MC-1) GN=ftsH PE=3 SV=1
Length = 673
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/491 (50%), Positives = 327/491 (66%), Gaps = 34/491 (6%)
Query: 121 VWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVK-TFKDVKGCDDAKQ 179
VW+ + + S GG G G S + ++M +K K TF+DV G ++AK+
Sbjct: 117 VWIY----FMRQMQSGGGRGAMSFGKSKA--------KLMSDKAAKVTFQDVAGIEEAKE 164
Query: 180 ELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFE 239
EL EVV++LK+P KF RLGGK+PKG+LL G PGTGKTLLA+AIAGEA VPFF +GS+F
Sbjct: 165 ELQEVVQFLKDPHKFQRLGGKIPKGVLLVGPPGTGKTLLARAIAGEANVPFFNLSGSDFV 224
Query: 240 EMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEM 295
EMFVGVGA RVR +F+ KK APCIIFIDEIDAVG R G ++TL+QLLVEM
Sbjct: 225 EMFVGVGAARVRDMFEQGKKNAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEM 284
Query: 296 DGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLAD 355
DGFE EG+I++AATN PD+LDPAL RPGRFDR + VPNPD+ GR +IL++++ PL+D
Sbjct: 285 DGFESTEGVIMVAATNRPDVLDPALLRPGRFDRQVTVPNPDILGRTQILKVHMNKVPLSD 344
Query: 356 DVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMF 415
VD + IAR TPGF+GADLANLVN AA+ AA + + E AKD+++MG R++
Sbjct: 345 SVDAEVIARATPGFSGADLANLVNEAALIAAQLDKRVVEMEDFENAKDKVMMGKPRRSAV 404
Query: 416 ISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQL 475
ISE+ +K TAYHE+GHA+VA +GA P+HK TI+PRG ALG+ QLP D + S+ QL
Sbjct: 405 ISEKERKTTAYHEAGHAVVAMALDGADPVHKVTIIPRGRALGLTMQLPLEDRYTYSKVQL 464
Query: 476 LARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP 535
+ + MGGR+AEEL+ + +TTGA +D+ AT+LA M+ + GMSD +GP+ +
Sbjct: 465 EQNIAILMGGRLAEELVL--NQLTTGAGNDIQRATDLARKMICSYGMSDTLGPLTYGENE 522
Query: 536 ---------------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYE 580
S E RIDAEV ++ Y R K +L + LH +A ALLE E
Sbjct: 523 QEIFLGREITQHKSVSEETARRIDAEVFDIVDRNYKRAKQILTDKMEVLHTMAQALLERE 582
Query: 581 TLSAEEIKRIL 591
T+ A+E+ +++
Sbjct: 583 TIDADEVIKLM 593
>sp|A9EXK6|FTSH4_SORC5 ATP-dependent zinc metalloprotease FtsH 4 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH4 PE=3 SV=1
Length = 648
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 250/480 (52%), Positives = 326/480 (67%), Gaps = 28/480 (5%)
Query: 142 SGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKL 201
+G G + S+ K + + +N TF DV G D+AK EL E++ +LK+P KF +LGG++
Sbjct: 139 AGGGKAMSFG-KSRARLLSEAQNKVTFADVAGIDEAKDELEEIIAFLKDPKKFQKLGGRI 197
Query: 202 PKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 261
PKG+L+ G PGTGKTLLA+AIAGEAGVPFF +GS+F EMFVGVGA RVR LF+ KK A
Sbjct: 198 PKGVLMMGPPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKHA 257
Query: 262 PCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILD 317
PCIIFIDEIDAVG R G ++TL+QLLVEMDGFE NEG+I++AATN PD+LD
Sbjct: 258 PCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNEGVIIVAATNRPDVLD 317
Query: 318 PALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANL 377
PA+ RPGRFDR IVV PDVRGR+ IL ++ + PL DVD++ +ARGTPGF GAD+ NL
Sbjct: 318 PAILRPGRFDRRIVVNRPDVRGREGILRVHTKKVPLGPDVDMEILARGTPGFVGADIENL 377
Query: 378 VNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFN 437
VN AA+ AA + ++ + E AKD++LMG ER++M IS+E K+ TAYHE+GHA+VA
Sbjct: 378 VNEAALLAARQDKDVVSMVDFEMAKDKVLMGAERRSMVISDEEKRTTAYHEAGHALVAKL 437
Query: 438 TEG-AHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRD 496
E + P+HK TI+PRG ALG+ QLP D S+S+ ARL V MGGRVAEE++FG
Sbjct: 438 LEKFSDPVHKVTIIPRGPALGLTQQLPKEDRLSMSRDFAKARLSVLMGGRVAEEIVFG-- 495
Query: 497 HITTGASSDLHSATELAHYMVSNCGMSDAIGPVHI---------------KDRPSSE-MQ 540
TTGA +D+ A+ LA MV+ GMSD IGP+ + R SE +
Sbjct: 496 QFTTGAGNDIKQASNLARRMVTEFGMSDVIGPISYGADEESVFLGRDFTSRRRDYSETIA 555
Query: 541 SRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL----LPYRE 596
++ID EV + + +A+ + LL + + L LA ALLE ETL AEE+ I+ LP R+
Sbjct: 556 NQIDDEVRRFILDAHAEARQLLTDNREILERLATALLERETLDAEEVDAIVGGRELPQRQ 615
>sp|D1BLD0|FTSH_VEIPT ATP-dependent zinc metalloprotease FtsH OS=Veillonella parvula
(strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) GN=ftsH
PE=3 SV=1
Length = 642
Score = 464 bits (1195), Expect = e-130, Method: Compositional matrix adjust.
Identities = 253/467 (54%), Positives = 328/467 (70%), Gaps = 23/467 (4%)
Query: 158 EVMPEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 216
++M E NVK +FKDV G ++AKQEL EVVE+LK+P KFT +G K+PKG+LL G PGTGKT
Sbjct: 142 KLMGEGNVKVSFKDVAGAEEAKQELEEVVEFLKDPGKFTTIGAKIPKGVLLAGPPGTGKT 201
Query: 217 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 276
LLAKA+AGEAGVPFF +GS+F EMFVGVGA RVR LF AKK APCIIFIDEIDAVG
Sbjct: 202 LLAKAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFTQAKKNAPCIIFIDEIDAVGRQ 261
Query: 277 RKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 332
R G ++TL+QLLVEMDGF NEGII +AATN PDILDPAL RPGRFDR ++V
Sbjct: 262 RGAGLGGGHDEREQTLNQLLVEMDGFGANEGIITIAATNRPDILDPALLRPGRFDRQVIV 321
Query: 333 PNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEK 392
PD+RGR+ IL+++ ++KPLADDVD+K IA+ TPGF GADL+NL+N AA+ AA +
Sbjct: 322 GRPDLRGREAILKVHARNKPLADDVDLKIIAKKTPGFTGADLSNLLNEAALLAARLNKKV 381
Query: 393 LTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR 452
+T E+E A +++ MG ER++ +S++ +KLTAYHESGHAIVA A P+HK TI+PR
Sbjct: 382 ITMAEVEEASEKVSMGPERRSHIVSDKDRKLTAYHESGHAIVAHLLPHADPVHKVTIIPR 441
Query: 453 GSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATEL 512
G+A G LP+ ++ ++ QLLA + V +GGR+AE LI D I+TGAS DL S T
Sbjct: 442 GAAGGYTMMLPTEEQNYKTKSQLLADIRVALGGRIAEALIL--DEISTGASGDLQSVTNT 499
Query: 513 AHYMVSNCGMSDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDR 557
A MV+ GMSD +GP+ ++ S E+ ++ID+E+ +++ EAY
Sbjct: 500 ARAMVTRWGMSDELGPIVFGEQQEQIFLGKNLGHERNYSEEIAAKIDSEIHRIVEEAYKD 559
Query: 558 VKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPEQQE 604
V LL +EK LH +ANALLE ET+ A+ + L Y + PE +E
Sbjct: 560 VTKLLSDNEKFLHDMANALLEEETIDAKAVDN-LYKYGTTKEPEAEE 605
>sp|P54813|YME1_CAEEL ATP-dependent zinc metalloprotease YME1 homolog OS=Caenorhabditis
elegans GN=ymel-1 PE=3 SV=2
Length = 723
Score = 463 bits (1192), Expect = e-129, Method: Compositional matrix adjust.
Identities = 253/515 (49%), Positives = 334/515 (64%), Gaps = 39/515 (7%)
Query: 95 DPKVSNK-SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPK 153
D K SN +RF L+ I F G + + +G +GS P+
Sbjct: 191 DGKKSNTLTRFYIFLVFCIFFGYLTGRIRVR--------------VGDRQIGSLFFSNPQ 236
Query: 154 ELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGT 213
E+N PE TF DV+G D+AK E+ E+V+YLK+P K++RLGG+LPKG+LL G PGT
Sbjct: 237 EVN----PEDVQVTFDDVRGMDEAKLEVEEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGT 292
Query: 214 GKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAV 273
GKTLLA+AIAGEA VPFF+ AGSEF+E+ VG GARRVR LF AK +APCIIFIDEID+V
Sbjct: 293 GKTLLARAIAGEAQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEIDSV 352
Query: 274 GSTRKQWEGH--TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIV 331
GS R H +T++QLL EMDGF +NEGII++AATN D LD AL RPGRFD +
Sbjct: 353 GSKRVSNSIHPYANQTINQLLSEMDGFTRNEGIIVIAATNRVDDLDKALLRPGRFDVRVT 412
Query: 332 VPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGE 391
VP PD+ GR +I YL + +D K +A+G+ GF GAD+ N+VN AA+KAA D
Sbjct: 413 VPKPDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAV 472
Query: 392 KLTATELEFAKDRILMGTERKTMFI-SEESKKLTAYHESGHAIVAFNTEGAHPIHKATIM 450
++T L+ A+DR+LMG R I EE+ + TAYHE+GH +V+ T+ A P+HK TI+
Sbjct: 473 EVTMAYLDEARDRVLMGPARTGGRIPDEEANRNTAYHEAGHTLVSLYTKDATPLHKVTII 532
Query: 451 PRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSAT 510
PRG +LG LP D +++ Q+LA LDV MGGRVAEELIFG D +TTGA+ DL AT
Sbjct: 533 PRGQSLGHTAMLPEKDSYQLTKAQMLATLDVMMGGRVAEELIFGDDKVTTGAADDLSKAT 592
Query: 511 ELAHYMVSNCGMSDAIGPVHIKDRPSSEMQSR--------------IDAEVVKLLREAYD 556
+LA MV GMSD +G ++D + + +S IDAE+ ++L+E+Y
Sbjct: 593 QLAVQMVKVFGMSDKVG---LRDFTAQDNESALVKVSDLAPQTAELIDAEINRVLQESYK 649
Query: 557 RVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 591
R K +L+ +K+ LA ALLEYETLSA+E+KR++
Sbjct: 650 RAKVILETKKKEHQLLAEALLEYETLSADEVKRVI 684
>sp|P71377|FTSH_HAEIN ATP-dependent zinc metalloprotease FtsH OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ftsH PE=3
SV=1
Length = 635
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 246/507 (48%), Positives = 339/507 (66%), Gaps = 32/507 (6%)
Query: 104 FAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEK 163
+Q LIS VG VW+ +Q GG G S + K LN++ +
Sbjct: 99 LSQILISWFPMLFLVG-VWVFFMRQMQG-----GGGKAMSFGKSRA---KMLNQDQIK-- 147
Query: 164 NVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 223
TF DV GCD+AK+E+ E+V++L++P+KF LGGK+PKGIL+ G PGTGKTLLA+AIA
Sbjct: 148 --VTFADVAGCDEAKEEVGEIVDFLRDPNKFQNLGGKIPKGILMVGPPGTGKTLLARAIA 205
Query: 224 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG- 282
GEA VPFF +GS+F EMFVGVGA RVR +F+ AKK APC+IFIDEIDAVG R G
Sbjct: 206 GEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGG 265
Query: 283 ---HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 339
++TL+Q+LVEMDGF N+G+I++AATN PD+LDPALTRPGRFDR +VV PDV+G
Sbjct: 266 GHDEREQTLNQMLVEMDGFSGNDGVIVIAATNRPDVLDPALTRPGRFDRQVVVGLPDVKG 325
Query: 340 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 399
R++IL+++++ +A DVD +ARGTPG++GADLANLVN AA+ AA +T E E
Sbjct: 326 REQILKVHMRKVSVAQDVDAMTLARGTPGYSGADLANLVNEAALFAARVNKRTVTMLEFE 385
Query: 400 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMV 459
AKD+I MG ER+TM ++++ K+ TAYHE+GHAIV + P+HK TI+PRG ALG+
Sbjct: 386 KAKDKINMGPERRTMIMTDKQKESTAYHEAGHAIVGYLVPEHDPVHKVTIIPRGRALGVT 445
Query: 460 TQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSN 519
LP D+ S+SQKQL ++L GR+AE+LI+G ++I+TGAS+D+ AT +A MV+
Sbjct: 446 FFLPEGDQISISQKQLESKLSTLYAGRLAEDLIYGEENISTGASNDIKVATNIARNMVTQ 505
Query: 520 CGMSDAIGPV-HIKDRP--------------SSEMQSRIDAEVVKLLREAYDRVKALLKK 564
G S+ +GP+ + +D S E ID EV ++ Y R + +L
Sbjct: 506 WGFSEKLGPILYTEDEGEVFLGRSMAKAKHMSDETAHSIDEEVRAIVNRNYARAREILID 565
Query: 565 HEKQLHALANALLEYETLSAEEIKRIL 591
+ LHA+ +AL++YET+ E+IK+++
Sbjct: 566 NMDILHAMKDALVKYETIEEEQIKQLM 592
>sp|C1F8X6|FTSH_ACIC5 ATP-dependent zinc metalloprotease FtsH OS=Acidobacterium
capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
GN=ftsH PE=3 SV=1
Length = 639
Score = 462 bits (1190), Expect = e-129, Method: Compositional matrix adjust.
Identities = 243/469 (51%), Positives = 321/469 (68%), Gaps = 23/469 (4%)
Query: 142 SGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKL 201
SG + S+ M +K V TFKDV G D+AK+EL E++E+L+ KF +LGG++
Sbjct: 130 SGGNKALSFGKSRARLLSMQQKKV-TFKDVAGVDEAKEELKEIIEFLREAQKFQKLGGRI 188
Query: 202 PKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 261
PKG+LL G PGTGKTLLA+A+AGEA VPFF +GS+F EMFVGVGA RVR LF+ KK A
Sbjct: 189 PKGVLLVGPPGTGKTLLARAVAGEANVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNA 248
Query: 262 PCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILD 317
PCIIFIDEIDAVG R G ++TL+QLLVEMDGFE N+G+IL+AATN PD+LD
Sbjct: 249 PCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEANDGVILVAATNRPDVLD 308
Query: 318 PALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANL 377
PAL RPGRFDR +VV PDVRGR+E+L ++ + PLA+DVD++ +ARGTPGF+GADLAN+
Sbjct: 309 PALLRPGRFDRRVVVGRPDVRGREEVLRVHAKKVPLAEDVDLRVLARGTPGFSGADLANM 368
Query: 378 VNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFN 437
VN A+ AA + +T + E AKD++LMG ERK+M +++E K++TAYHESGHAIVA
Sbjct: 369 VNEGALSAARANRKVVTMQDFESAKDKVLMGAERKSMLLTDEEKRVTAYHESGHAIVAAM 428
Query: 438 TEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDH 497
+ A P+HK TI+PRG ALG+ QLP D+ +V++ L +L + MGGR+AEE+
Sbjct: 429 RKHADPLHKVTIIPRGMALGVTMQLPEEDKHTVTKDYLETQLAILMGGRIAEEIFL--HQ 486
Query: 498 ITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRP---------------SSEMQSR 542
+TTGA +D+ ATE+A MV GMS +GP+ + S E +
Sbjct: 487 MTTGAGNDIERATEMARKMVCEYGMS-RLGPLTYGKKEEQIFLGREIAQHRDFSEETARQ 545
Query: 543 IDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 591
IDAEV L+ EAY LL ++ +H +A ALLE ET+ A +I+ I+
Sbjct: 546 IDAEVRSLVDEAYRASYQLLNDNQPIMHKMAAALLERETIDANDIRMII 594
>sp|Q6LUJ8|FTSH_PHOPR ATP-dependent zinc metalloprotease FtsH OS=Photobacterium profundum
GN=ftsH PE=3 SV=1
Length = 696
Score = 461 bits (1187), Expect = e-129, Method: Compositional matrix adjust.
Identities = 236/463 (50%), Positives = 320/463 (69%), Gaps = 20/463 (4%)
Query: 159 VMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTL 217
+M E +KT F DV GCD+AK+++ E+V+YL++PS+F +LGGK+P GILL G PGTGKTL
Sbjct: 168 MMSEDQIKTTFADVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGILLVGPPGTGKTL 227
Query: 218 LAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTR 277
LAKAIAGEA VPFF +GS+F EMFVGVGA RVR +F+ AKK APCIIFIDEIDAVG R
Sbjct: 228 LAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQR 287
Query: 278 KQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVP 333
G ++TL+Q+LVEMDGFE NEG+I++AATN PD+LDPAL RPGRFDR +VV
Sbjct: 288 GAGVGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVG 347
Query: 334 NPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKL 393
PDVRGR++IL+++++ PL DV+ IARGTPGF+GADLANLVN AA+ AA +
Sbjct: 348 LPDVRGREQILKVHMRKVPLEGDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRVV 407
Query: 394 TATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG 453
+ E E AKD+I+MG ERK+M +SE+ K+ TAYHE+GHAI+ P++K +I+PRG
Sbjct: 408 SMQEFELAKDKIMMGAERKSMVMSEDQKESTAYHEAGHAIIGRLVPDHDPVYKVSIIPRG 467
Query: 454 SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELA 513
ALG+ LP D S S++ L + L GGR+AEELI+G D ++TGAS+D+ AT++A
Sbjct: 468 RALGVTMYLPEKDRISHSREFLESMLSSLYGGRLAEELIYGVDKVSTGASNDIERATDIA 527
Query: 514 HYMVSNCGMSDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRV 558
MV+ G S+ +GPV D S + ID E+ L+ Y+R
Sbjct: 528 RKMVTQWGFSEKMGPVLYADDEGEVFLGRSVTQTKHMSDDTARAIDMEIRALIDRNYERA 587
Query: 559 KALLKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPE 601
+ +L ++ +HA+ +AL++YET+ A +I ++ E + P+
Sbjct: 588 REILAQNMDIMHAMKDALMKYETIDAAQIDDLMARKSEIRAPK 630
>sp|Q89AF2|FTSH_BUCBP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=ftsH PE=3 SV=1
Length = 610
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/511 (48%), Positives = 344/511 (67%), Gaps = 33/511 (6%)
Query: 101 KSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVM 160
+S F IS + +G VW+ +Q +G GG G G S + ++
Sbjct: 96 QSFFTAIFISWFPMLLLIG-VWVFFMRQMQ--VG--GGKGAMSFGKSKA--------RML 142
Query: 161 PEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLA 219
PE VK TF DV GCD+AK+E+ E+VEYLK PS+F +LGGK+PKGIL+ G PGTGKTLLA
Sbjct: 143 PEDQVKITFSDVAGCDEAKEEVQELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLA 202
Query: 220 KAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ 279
KAIAGEA VPFF +GS+F EMFVGVGA RVR +F+ ++K APCIIFIDEIDAVG R
Sbjct: 203 KAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIFIDEIDAVGRQRGA 262
Query: 280 WEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNP 335
G ++TL+Q+LVEMDGF+ NEGIIL+AATN PD+LDPAL RPGRFDR I V P
Sbjct: 263 GLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQIFVALP 322
Query: 336 DVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTA 395
D+RGR++I++++++ PL ++VD IARGTPGF+GADLANLVN AA+ AA + + +
Sbjct: 323 DIRGREKIIQVHMKKVPLGNNVDPMIIARGTPGFSGADLANLVNEAALFAARNNRDVVMM 382
Query: 396 TELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA 455
++ E AKD+I MG+ER++M ++E+ K+ TAYHE+GH IV P HK TI+PRG A
Sbjct: 383 SDFESAKDKITMGSERRSMVMTEKQKESTAYHEAGHVIVGRLVPEHDPAHKVTIIPRGRA 442
Query: 456 LGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHY 515
LG+ LP D S+++ +L +++ GGR+AEE+I+G ++++TGA +D+ AT LA
Sbjct: 443 LGVTFFLPKDDVLSINKNKLESQISTLYGGRLAEEIIYGVNNVSTGAHNDIKVATNLARN 502
Query: 516 MVSNCGMSDAIGPVH--------------IKDRPSSEMQSRIDAEVVKLLREA-YDRVKA 560
MV+ G S +GP+ K + S+ +RI E VKLL E Y+R K
Sbjct: 503 MVTQWGFSKKLGPLLYSEEEGEIFLGRTVTKSKHMSDETARIIDEEVKLLVEKNYNRAKK 562
Query: 561 LLKKHEKQLHALANALLEYETLSAEEIKRIL 591
+L+++ LHA+ +AL++YET+++ +I ++
Sbjct: 563 ILEENLDILHAMKDALIKYETINSRQIDDLM 593
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 461 bits (1186), Expect = e-129, Method: Compositional matrix adjust.
Identities = 237/447 (53%), Positives = 313/447 (70%), Gaps = 21/447 (4%)
Query: 167 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 226
TF DV G D+A QEL E+ E+L+NP KF +LG ++PKG LL G PGTGKTLLA+A+AGEA
Sbjct: 187 TFADVAGADEAVQELTEIKEFLENPQKFQKLGARIPKGALLVGPPGTGKTLLARAVAGEA 246
Query: 227 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 282
GVPFF +GS+F EMFVGVGA RVR LF+ AK+ +PCIIF+DEIDAVG R G
Sbjct: 247 GVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHD 306
Query: 283 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 342
++TL+QLLVEMDGF+ GII++AATN PDILDPAL RPGRFDR IVV PD+ GR +
Sbjct: 307 EREQTLNQLLVEMDGFDSKSGIIMLAATNRPDILDPALLRPGRFDRQIVVDRPDLPGRIK 366
Query: 343 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 402
IL+++ + KPL +DVD++ IARGTPGF GADLANLVN AA+ AA E++ E+E A
Sbjct: 367 ILKVHTRGKPLGEDVDIETIARGTPGFTGADLANLVNEAALLAARHNKEQIEMAEMEEAI 426
Query: 403 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 462
DR++ G ERKT ISE+ K++TAYHE+GHAIV A P+HK TI+PRG ALG+ L
Sbjct: 427 DRVIAGPERKTRLISEKEKEITAYHEAGHAIVGALLPEADPVHKVTIIPRGQALGVTMSL 486
Query: 463 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 522
P D +S+ QL+A+L +GGR AE ++F + ITTGAS+D+ AT++A MV+ GM
Sbjct: 487 PEEDRFMMSRAQLMAQLSYMLGGRAAERVVF--EEITTGASNDIERATKVARQMVTRYGM 544
Query: 523 SDAIGPV---------------HIKDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEK 567
S+ +G + H + S E+ +ID E+ +L+ EAYD + LL ++ +
Sbjct: 545 SEKLGLIALGQHDGQVFMGRDLHAQPDYSDEIAFQIDKEIRRLVDEAYDTAEDLLVRNRR 604
Query: 568 QLHALANALLEYETLSAEEIKRILLPY 594
L LA+ L+EYET+ AE ++R++ Y
Sbjct: 605 LLEKLASDLIEYETVDAEHLRRLVEEY 631
>sp|Q8K9G8|FTSH_BUCAP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=ftsH PE=3 SV=1
Length = 613
Score = 461 bits (1185), Expect = e-129, Method: Compositional matrix adjust.
Identities = 248/508 (48%), Positives = 343/508 (67%), Gaps = 33/508 (6%)
Query: 121 VWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQ 179
VW+ +Q +G GG G G S + ++ E ++T F DV GCD+AK+
Sbjct: 115 VWIFFMRQMQ--MG--GGKGAMSFGKSKA--------RMLSEDQIQTTFADVAGCDEAKE 162
Query: 180 ELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFE 239
E+ E+VEYLK PS+F +LGGK+PKGIL+ G PGTGKTLLAKAIAGEA VPFF +GS+F
Sbjct: 163 EVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFV 222
Query: 240 EMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEM 295
EMFVGVGA RVR +F+ A+K APCIIFIDEIDAVG R G ++TL+Q+LVEM
Sbjct: 223 EMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEM 282
Query: 296 DGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLAD 355
DGF+ NEG+IL+AATN PD+LDPAL RPGRFDR ++V PDVRGR++IL+++++ PL++
Sbjct: 283 DGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSE 342
Query: 356 DVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMF 415
DVD IARGTPGF+GADLANLVN AA+ AA ++ E AKD+I+MG+ER++M
Sbjct: 343 DVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMV 402
Query: 416 ISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQL 475
+S+ K+ TAYHE+GH I+ P HK TI+PRG ALG+ LP SD S+S+++L
Sbjct: 403 MSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQALGITFFLPESDILSISRQKL 462
Query: 476 LARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHI---- 531
+++ GGR+AEE+I+G +++TGA +D+ AT LA MV+ G SD +GP+
Sbjct: 463 ESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLLYAEEE 522
Query: 532 ----------KDRPSSEMQSRIDAEVVKLLREA-YDRVKALLKKHEKQLHALANALLEYE 580
K + S+ +RI E VKLL E Y+R + +L ++ LHA+ +AL++YE
Sbjct: 523 GEVFLGRSVAKAKHMSDETARIIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYE 582
Query: 581 TLSAEEIKRILLPYREGQLPEQQEELEE 608
T+ + +I L+ RE + P+ E+++
Sbjct: 583 TIDSLQIDD-LMERREVRKPKGWLEVDQ 609
>sp|B4SCV5|FTSH_PELPB ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon
phaeoclathratiforme (strain DSM 5477 / BU-1) GN=ftsH
PE=3 SV=1
Length = 662
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/482 (50%), Positives = 329/482 (68%), Gaps = 25/482 (5%)
Query: 140 GTSGVGSSSSYAPKELNKEVMPEKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLG 198
G +G + + ++ + +++ E VKT FKDV G D+A +EL E VE+L NP KF ++G
Sbjct: 180 GQNGAQAKNIFSFGKSRAKMVSEFEVKTTFKDVAGVDEAIEELQETVEFLTNPEKFQKIG 239
Query: 199 GKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAK 258
GK+PKG+LL G PGTGKTLLAKAIAGEA VPFF +G++F EMFVGVGA RVR LF+ AK
Sbjct: 240 GKIPKGVLLLGPPGTGKTLLAKAIAGEAKVPFFSISGADFVEMFVGVGAARVRDLFEQAK 299
Query: 259 KKAPCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPD 314
K APCIIFIDEIDAVG +R G ++TL+QLLVEMDGF NE +IL+AATN PD
Sbjct: 300 KNAPCIIFIDEIDAVGRSRGAGLGGGHDEREQTLNQLLVEMDGFTTNENVILIAATNRPD 359
Query: 315 ILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADL 374
+LD AL RPGRFDR I + PD+RGR+ IL+++ ++ PL DVD+ +A+ +PGF+GADL
Sbjct: 360 VLDSALLRPGRFDRQITIDKPDIRGREAILKIHTRNTPLDGDVDITVLAKSSPGFSGADL 419
Query: 375 ANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIV 434
ANLVN AA+ AA +TA E A+D+ILMG ER++MFIS+E KKLTAYHE+GH +V
Sbjct: 420 ANLVNEAALLAARHEQVLITAVNFEQARDKILMGPERRSMFISDEQKKLTAYHEAGHVLV 479
Query: 435 AFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFG 494
+ +T+G+ PIHK TI+PRG +LG+ LP D + +++ LLA + +GGRVAEEL+F
Sbjct: 480 SIHTKGSDPIHKVTIIPRGRSLGLTAYLPLEDRYTHNREYLLAMITYALGGRVAEELVF- 538
Query: 495 RDHITTGASSDLHSATELAHYMVSNCGMSDAIGPV----------------HIKDRPSSE 538
+TGA++D+ AT++A MV GMS+++GP+ HI++ S E
Sbjct: 539 -QECSTGAANDIEKATDIARRMVRQWGMSESLGPINYGDSHKEVFLGKDYSHIREY-SEE 596
Query: 539 MQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQ 598
+ID EV ++ + K +L + LH LA L+E E+L+A EI+ I P +G
Sbjct: 597 TALQIDVEVRNIIMGCMENAKTVLSEQLAVLHRLAGILIEKESLNAREIQEITGP-GQGA 655
Query: 599 LP 600
LP
Sbjct: 656 LP 657
>sp|Q1D491|FTSH_MYXXD ATP-dependent zinc metalloprotease FtsH OS=Myxococcus xanthus
(strain DK 1622) GN=ftsH PE=3 SV=1
Length = 638
Score = 458 bits (1178), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/459 (51%), Positives = 326/459 (71%), Gaps = 24/459 (5%)
Query: 164 NVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIA 223
N TF DV G D+ K+EL E+V +LK+P KFT+LGG++PKG+L+ G+PGTGKTLLA+A+A
Sbjct: 150 NKVTFADVAGADECKEELEEIVAFLKDPKKFTKLGGRIPKGVLMMGSPGTGKTLLARAVA 209
Query: 224 GEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG- 282
GEAGVPFF +GS+F EMFVGVGA RVR LF+ KK APCIIFIDEIDAVG R G
Sbjct: 210 GEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHRGAGLGG 269
Query: 283 ---HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRG 339
++TL+QLLVEMDGFE N+G+IL+AATN PD+LDPAL RPGRFDR IVVP PDV+G
Sbjct: 270 GHDEREQTLNQLLVEMDGFESNDGVILIAATNRPDVLDPALQRPGRFDRRIVVPRPDVKG 329
Query: 340 RQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELE 399
R +L+++ + PLA +VD++ IARGTPG GADL NLVN +A+ AA E++ ++ E
Sbjct: 330 RLGVLKVHTRRVPLAPEVDLEVIARGTPGMTGADLENLVNESALMAARQNKERVDLSDFE 389
Query: 400 FAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMV 459
AKD++ MG ER++M ++E+ KK TA HE+GHA++A G P+HK TI+PRG ALG+
Sbjct: 390 AAKDKVFMGPERRSMIMTEKEKKNTAVHEAGHALLAKLLPGCDPLHKVTIIPRGQALGVT 449
Query: 460 TQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSN 519
LP+ D+ + +KQ+L ++ + MGGR+AEEL+F + +++GA++D+ ATE A MV
Sbjct: 450 WSLPTEDKVNGYKKQMLDQISMAMGGRIAEELMF--NEMSSGAANDIERATETARAMVCR 507
Query: 520 CGMSDAIGPVHI----------KDRPSSEMQS-----RIDAEVVKLLREAYDRVKALLKK 564
GMS+ +GP+ +D SS+ S +IDAEV ++ Y+R K LL +
Sbjct: 508 WGMSEKMGPLAFGKSDGEVFLGRDFNSSKDYSEDTARQIDAEVRNIVVGCYERGKNLLTE 567
Query: 565 HEKQLHALANALLEYETLSAEEIKRILLPYREGQLPEQQ 603
+ + L +++AL+EYETL AE++ +L + GQL ++
Sbjct: 568 NIEALRRVSDALVEYETLDAEDVNILL---QGGQLTRER 603
>sp|P57462|FTSH_BUCAI ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=ftsH PE=3
SV=2
Length = 611
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/520 (48%), Positives = 345/520 (66%), Gaps = 34/520 (6%)
Query: 102 SRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMP 161
S F LIS + +G VW+ +Q +G GG G G S + ++
Sbjct: 97 SLFISILISWFPMLLLIG-VWIFFMRQMQ--MG--GGKGAMSFGKSKA--------RMLS 143
Query: 162 EKNVKT-FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAK 220
E ++T F DV GCD+AK+E+ E+VEYLK PS+F +LGGK+PKGIL+ G PGTGKTLLAK
Sbjct: 144 EDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAK 203
Query: 221 AIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQW 280
AIAGEA VPFF +GS+F EMFVGVGA RVR +F+ ++K APCIIFIDEIDAVG R
Sbjct: 204 AIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAG 263
Query: 281 EG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPD 336
G ++TL+Q+LVEMDGF+ NEGIIL+AATN PD+LDPAL RPGRFDR ++V PD
Sbjct: 264 LGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPD 323
Query: 337 VRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTAT 396
+RGR++IL+++++ PL+ DVD IARGTPGF+GADLANLVN AA+ AA ++
Sbjct: 324 IRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSML 383
Query: 397 ELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSAL 456
E E AKD+++MG+ER++M +S+ K+ TAYHE+GH I+ P HK TI+PRG AL
Sbjct: 384 EFERAKDKMMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGRAL 443
Query: 457 GMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYM 516
G+ LP SD S+S+++L +++ GGR+AEE+I+G +++TGA +D+ AT LA M
Sbjct: 444 GVTFFLPESDTLSISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNM 503
Query: 517 VSNCGMSDAIGPVHI--------------KDRPSSEMQSRIDAEVVKLLREA-YDRVKAL 561
V+ G S+ +GP+ K + S+ +RI E VKLL E Y R + +
Sbjct: 504 VTQWGFSEKLGPLLYAEEEGEIFLGRSVAKAKHMSDETARIIDEEVKLLIEINYSRARNI 563
Query: 562 LKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPE 601
L ++ LHA+ AL++YET+ A +I L+ RE + P+
Sbjct: 564 LNENIDILHAMKEALIKYETIDAFQIDD-LMKRREVRQPK 602
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 247/513 (48%), Positives = 337/513 (65%), Gaps = 33/513 (6%)
Query: 99 SNKSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKE 158
S S F ++ T++ T+ +VWL +L G T ++ Y P NK
Sbjct: 102 SGSSSFWINVLGTLIPTILFIVVWLFIMRSLS---GRNNQAFTFTKSRATMYKPSG-NKR 157
Query: 159 VMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLL 218
V TFKDV G ++A +EL EVVE+LK+PSKF R+G ++PKGILL G PGTGKTLL
Sbjct: 158 V-------TFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLL 210
Query: 219 AKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRK 278
A+A+AGEA VPFF+ +GS+F E+FVGVGA RVR LF AK APCI+FIDEIDAVG R
Sbjct: 211 ARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFAQAKAHAPCIVFIDEIDAVGRHRG 270
Query: 279 QWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPN 334
G ++TL+QLLVEMDGF+ EGII+MAATN PDILDPAL RPGRFD+ IVV
Sbjct: 271 AGLGGGHDEREQTLNQLLVEMDGFDSKEGIIVMAATNRPDILDPALLRPGRFDKKIVVDP 330
Query: 335 PDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLT 394
PD+ GR++ILE++ ++KPLA+DV+++ IA+ TPGF GADL NLVN AA+ AA +G +K+T
Sbjct: 331 PDMLGRKKILEIHTRNKPLAEDVNLEIIAKRTPGFVGADLENLVNEAALLAAREGRDKIT 390
Query: 395 ATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRG- 453
+ E A DR++ G RK+ IS + K++ AYHE+GHA+V+ P+H+ +I+PRG
Sbjct: 391 MKDFEEAIDRVIAGPARKSKLISPKEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGY 450
Query: 454 SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELA 513
ALG LP D+ VS+ +LL +L +GGR AEE++FG +T+GA++D+ ATE+A
Sbjct: 451 KALGYTLHLPEEDKYLVSRNELLDKLTALLGGRAAEEVVFG--DVTSGAANDIERATEIA 508
Query: 514 HYMVSNCGMSDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRV 558
MV GMS+ +GP+ S E+ S+ID EV K++ Y+R
Sbjct: 509 RNMVCQLGMSEELGPLAWGKEEQEVFLGKEITRLRNYSEEVASKIDEEVKKIVTNCYERA 568
Query: 559 KALLKKHEKQLHALANALLEYETLSAEEIKRIL 591
K +++K+ KQL + LLE ET+ +E++RIL
Sbjct: 569 KEIIRKYRKQLDNIVEILLEKETIEGDELRRIL 601
>sp|Q6MLS7|FTSH1_BDEBA ATP-dependent zinc metalloprotease FtsH 1 OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=ftsH1 PE=3 SV=1
Length = 645
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 236/470 (50%), Positives = 313/470 (66%), Gaps = 24/470 (5%)
Query: 142 SGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKL 201
+G G + S+ K + + KN TFK+V G D+AK++L E+V +LK+P K+T+LGG++
Sbjct: 137 AGGGKAMSFG-KSRARLLTEHKNRVTFKEVAGVDEAKEDLQEIVSFLKDPKKYTKLGGRI 195
Query: 202 PKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 261
PKG+LL G+PGTGKTLLA+A+AGEAGVPFF +GS+F EMFVGVGA RVR LF+ KK A
Sbjct: 196 PKGVLLVGSPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQGKKNA 255
Query: 262 PCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILD 317
PC+IFIDEIDAVG R G ++TL+QLLVEMDGFE +EG+I++AATN PD+LD
Sbjct: 256 PCLIFIDEIDAVGRHRGAGMGGGHDEREQTLNQLLVEMDGFESSEGVIMIAATNRPDVLD 315
Query: 318 PALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANL 377
PAL RPGRFDR ++V PD++GR++IL ++++ PL DVD IARGTPGF+GADL NL
Sbjct: 316 PALLRPGRFDRRVIVNKPDLKGREQILAVHMRKTPLGPDVDASKIARGTPGFSGADLENL 375
Query: 378 VNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFN 437
VN AA+ AA + L + E AKD++ MG ER++M IS+E KK+TAYHE+GH +V
Sbjct: 376 VNEAALVAARSDKKYLEMEDFEKAKDKVTMGAERRSMVISDEDKKVTAYHEAGHTLVGKK 435
Query: 438 TEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDH 497
G PIHK TI+PRG ALG+ LP + S+S+ + + GGR AEELIF
Sbjct: 436 LVGLDPIHKVTIIPRGMALGVTQTLPEKESVSLSKSKAENMIAFLFGGRAAEELIF--KD 493
Query: 498 ITTGASSDLHSATELAHYMVSNCGMSDAIGPV--HIKDRP--------------SSEMQS 541
ITTGA +D+ ATE+A MV GMS +GP+ +D P S
Sbjct: 494 ITTGAGNDIERATEIARRMVCEWGMS-KLGPLAYETRDNPVFMGMGYGNKSKEYSDAKAQ 552
Query: 542 RIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 591
ID EV K+++ YD +L+ H+ L L ALLEYET+ E+ ++
Sbjct: 553 EIDTEVEKIIKHGYDISIQILRDHQDALERLTQALLEYETIDGHEVDMLV 602
>sp|D0LWB8|FTSH_HALO1 ATP-dependent zinc metalloprotease FtsH OS=Haliangium ochraceum
(strain DSM 14365 / JCM 11303 / SMP-2) GN=ftsH PE=3 SV=1
Length = 682
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 235/468 (50%), Positives = 322/468 (68%), Gaps = 26/468 (5%)
Query: 142 SGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKL 201
+G G + S+ K + + +N TFKDV G ++AK E+ E++ +LK+P KFTRLGG++
Sbjct: 166 AGGGKAMSFG-KSKARLLTDHQNKVTFKDVAGVEEAKDEVEEIIAFLKDPKKFTRLGGRI 224
Query: 202 PKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKA 261
PKG+L+ G PGTGKTLLA+AIAGEAGVPFF +GS+F EMFVGVGA RVR LF+ KK A
Sbjct: 225 PKGVLMMGPPGTGKTLLARAIAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNA 284
Query: 262 PCIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILD 317
PCIIFIDEIDAVG R G ++TL+QLLVEMDGFE N+G+IL+AATN PD+LD
Sbjct: 285 PCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFESNDGVILIAATNRPDVLD 344
Query: 318 PALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANL 377
PAL RPGRFDR I+VP PD+RGR IL ++ + PL+ +V ++ IARGTPGF+GADL +L
Sbjct: 345 PALLRPGRFDRRIIVPRPDLRGRTGILGVHTRKVPLSTEVALEVIARGTPGFSGADLESL 404
Query: 378 VNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFN 437
VN AA+ AA +++ + E AKD+++MG ER++M IS++ K+ TAYHE+GHA+VA
Sbjct: 405 VNEAALIAARRDKDRVDMEDFEDAKDKVMMGAERRSMIISDKEKRTTAYHEAGHALVA-K 463
Query: 438 TEGAH--PIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGR 495
GA P+HK +I+PRG ALG+ LP+ D +++ L ++ + MGGR+AEEL+
Sbjct: 464 LVGAETDPVHKVSIIPRGRALGVTQLLPTEDRLGFTREFALNKIAILMGGRLAEELVL-- 521
Query: 496 DHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHI-----------KDRPSSEMQS--- 541
TTGA D+ AT+LA MV+ GMSD IGP++ +D P +E S
Sbjct: 522 KQKTTGAGDDIDKATDLARRMVTEWGMSDVIGPLNFASGGKQEVFLGRDLPQAEAYSQET 581
Query: 542 --RIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEI 587
RID E+ +++ + Y+R + +L+++ L +A LLEYETL +I
Sbjct: 582 AQRIDGEIRRIVTDQYERARRMLEENRDALERVARGLLEYETLDGNDI 629
>sp|Q1LLA9|FTSH_RALME ATP-dependent zinc metalloprotease FtsH OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=ftsH PE=3 SV=1
Length = 649
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 229/466 (49%), Positives = 319/466 (68%), Gaps = 20/466 (4%)
Query: 143 GVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLP 202
G G + S+ K + + +N TF DV GCD++K+E+VE+V++LK+P KF +LGG++P
Sbjct: 145 GKGGAFSFG-KSRARLIDENQNAVTFADVAGCDESKEEVVELVDFLKDPQKFQKLGGRIP 203
Query: 203 KGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAP 262
+G+LL G PGTGKTLLA+AIAGEA VPFF +GS+F EMFVGVGA RVR +F+ AKK+AP
Sbjct: 204 RGVLLVGPPGTGKTLLARAIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKQAP 263
Query: 263 CIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDP 318
CI+FIDEIDAVG R G ++TL+Q+LVEMDGFE N G+I++AATN D+LD
Sbjct: 264 CIVFIDEIDAVGRHRGAGMGGGNDEREQTLNQMLVEMDGFEANSGVIVIAATNRADVLDK 323
Query: 319 ALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLV 378
AL RPGRFDR + V PD+RGR++IL+++++ P+ +DVD IARGTPGF+GADLANLV
Sbjct: 324 ALLRPGRFDRQVYVGLPDIRGREQILKVHMRKVPIGNDVDASIIARGTPGFSGADLANLV 383
Query: 379 NIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNT 438
N AA+ AA + + E AKD+I MG ERK+ + EE +K TAYHESGHA+VA
Sbjct: 384 NEAALFAARRSKRVVDMQDFEDAKDKIYMGPERKSTVMREEERKATAYHESGHAVVAKLL 443
Query: 439 EGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHI 498
A P+HK TIMPRG ALG+ QLP D+ S + +L + + GGR AEE+ + +
Sbjct: 444 PKADPVHKVTIMPRGWALGVTWQLPEHDKYSKYKDNMLEEIAILFGGRAAEEVFL--NAM 501
Query: 499 TTGASSDLHSATELAHYMVSNCGMSDAIGPVHIKDRPSSEM-------------QSRIDA 545
+TGAS+D AT++A MV+ GMSD++G + D M Q ++DA
Sbjct: 502 STGASNDFERATKIARDMVTRFGMSDSLGAMVYVDTEQDGMFGKLSSKTVSEATQQKVDA 561
Query: 546 EVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 591
E+ +++ + Y K LL+++ ++ A+ NAL+E+ET+ AE++ I+
Sbjct: 562 EIRRIIDDQYALAKRLLEENRDKVEAMTNALMEWETIDAEQVNDIM 607
>sp|B3DY14|FTSH2_METI4 ATP-dependent zinc metalloprotease FtsH 2 OS=Methylacidiphilum
infernorum (isolate V4) GN=ftsH2 PE=3 SV=1
Length = 641
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 228/444 (51%), Positives = 312/444 (70%), Gaps = 21/444 (4%)
Query: 167 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 226
TFKDV G ++AK+E+ E+VE+LK+P KF +LGG++PKG+L+ G PGTGKTLLAKAIAGEA
Sbjct: 151 TFKDVAGVEEAKEEVQELVEFLKDPKKFQKLGGRIPKGVLMVGPPGTGKTLLAKAIAGEA 210
Query: 227 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 282
VPFF +GS+F EMFVGVGA RVR +F+ A++ APCI+FIDEIDAVG R G
Sbjct: 211 DVPFFSISGSDFVEMFVGVGASRVRDMFEQARRHAPCIVFIDEIDAVGRARGTGLGGGHD 270
Query: 283 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 342
++TL+ LLVEMDG E EG+I++AATN D+LDPAL RPGRFDR + V PD+RGR++
Sbjct: 271 EREQTLNALLVEMDGIESQEGVIVIAATNRKDVLDPALLRPGRFDREVRVNLPDIRGREQ 330
Query: 343 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 402
IL ++ Q L+ + D+ A+ARGTPGF+GA+LANL+N AA+ AA G + + +LE A+
Sbjct: 331 ILRVHAQKIKLSKNADLSALARGTPGFSGAELANLINEAALIAAKKGKDNVDQPDLEEAR 390
Query: 403 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 462
D++ G ER+++ +SEE +K TAYHE+GHA++ E PIHK TI+PRG ALG+ L
Sbjct: 391 DKVRWGKERRSLAMSEEERKTTAYHEAGHAVLNVLLENTDPIHKVTIIPRGPALGVTMML 450
Query: 463 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 522
P+SD+ + +K++L L V MGGRVAEE+ G I++GAS D+ AT A MV GM
Sbjct: 451 PASDKYNARKKEVLDDLCVAMGGRVAEEVFLG--DISSGASGDIRQATWYARKMVCEWGM 508
Query: 523 SDAIGPVHIKD--------------RPSSEMQSR-IDAEVVKLLREAYDRVKALLKKHEK 567
S+ +G VH D R SE +R ID EV ++ AY++ K ++ +H+
Sbjct: 509 SEKLGMVHYADDSSMVFLGRELGTSRGYSEATARAIDHEVQHFIQAAYEKAKRIILEHKD 568
Query: 568 QLHALANALLEYETLSAEEIKRIL 591
++ ALA ALLEYETL+A+++ I+
Sbjct: 569 KVEALAQALLEYETLNADQVTEIV 592
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/504 (47%), Positives = 329/504 (65%), Gaps = 32/504 (6%)
Query: 107 ELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVK 166
+++ ++ V + W + +Q+ G GG G S + + +K V
Sbjct: 110 QMLPSLFLIVIFIIFWYI---FMQQAQGG-GGSKVMSFGKSRARMITDKDKRV------- 158
Query: 167 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 226
TF DV G D+ K+EL E+VE+LK P KF LG ++PKG+LL G PGTGKTLLAKA+AGEA
Sbjct: 159 TFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLVGPPGTGKTLLAKAVAGEA 218
Query: 227 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 282
GVPFF +GS+F EMFVGVGA RVR LF AKK APCI+FIDEIDAVG R G
Sbjct: 219 GVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDAVGRQRGAGLGGGHD 278
Query: 283 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 342
++TL+QLLVEMDGF NEGII++AATN PDILDPAL RPGRFDRHI V PD++GR+E
Sbjct: 279 EREQTLNQLLVEMDGFSVNEGIIVIAATNRPDILDPALLRPGRFDRHITVGIPDIKGREE 338
Query: 343 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 402
IL+++ ++KPLA DV ++ +AR TPGF GADL NL+N AA+ AA G +++T ELE A
Sbjct: 339 ILKIHSRNKPLAPDVSLQVLARRTPGFTGADLENLMNEAALLAARRGLKQITMAELEEAI 398
Query: 403 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 462
R++ G E+++ +SE+ KKL AYHE+GHA+VA P+H+ TI+PRG A G L
Sbjct: 399 TRVIAGPEKRSRIMSEKDKKLVAYHEAGHAVVAKLLPNTPPVHEVTIIPRGRAGGYTMLL 458
Query: 463 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 522
P D+ +S+ +++ + +GGRVAE L+ + I+TGA +D+ AT +A MV+ GM
Sbjct: 459 PEEDKYYMSKSEMMDEIVHLLGGRVAESLVL--NDISTGAQNDIERATNIARKMVTEYGM 516
Query: 523 SDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRVKALLKKHEK 567
S+ +GP+ + S E+ + ID E+ +++ EAY R ++LLK++
Sbjct: 517 SERLGPMTFGTKSEEVFLGRDLGRTRNYSEEVAAEIDREIKRIIEEAYKRAESLLKENID 576
Query: 568 QLHALANALLEYETLSAEEIKRIL 591
+LH +A AL+E E L+ EE +++
Sbjct: 577 KLHRVAKALIEKEKLNGEEFEKVF 600
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/479 (49%), Positives = 314/479 (65%), Gaps = 25/479 (5%)
Query: 143 GVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLP 202
G GS K K V +K FKDV G D+ KQELVEVVE+LK+P KF+ +G ++P
Sbjct: 140 GGGSRVMNFGKSKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIP 199
Query: 203 KGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAP 262
KG+LL G PGTGKTLLA+A+AGEAGVPFF +GS+F EMFVGVGA RVR LF+ AKK AP
Sbjct: 200 KGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAP 259
Query: 263 CIIFIDEIDAVGSTRKQWEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDP 318
CIIFIDEIDAVG R G ++TL+QLLVEMDGF NEGII++AATN DILDP
Sbjct: 260 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDP 319
Query: 319 ALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLV 378
AL RPGRFDR I V PDV GR+E+L+++ ++KPL DDV++K IA TPGF+GADL NL+
Sbjct: 320 ALLRPGRFDRQIQVNRPDVNGREEVLKVHARNKPLNDDVNLKTIATRTPGFSGADLENLL 379
Query: 379 NIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNT 438
N AA+ AA K++ +E A DR++ G +K+ IS + KK+ A+HE+GH +V
Sbjct: 380 NEAALVAARHDHTKISMIHIEEAIDRVIAGPAKKSRVISPKEKKIVAWHEAGHTVVGVKL 439
Query: 439 EGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHI 498
E A +HK TI+PRG A G LP D ++Q +LL ++ +GGRVAEE+ FG +
Sbjct: 440 ENADMVHKVTIVPRGMAGGYAVMLPKEDRYFMTQPELLDKIIGLLGGRVAEEVTFG--EV 497
Query: 499 TTGASSDLHSATELAHYMVSNCGMSDAIGPVHI----------------KDRPSSEMQSR 542
+TGA +D AT +A MV+ GMS+ +GP+ + S +
Sbjct: 498 STGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYSDAIAHE 557
Query: 543 IDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRILLPYREGQLPE 601
ID EV ++++E Y R K +L +++ L +A LL+ ETL AE+IK ++ EG+LP+
Sbjct: 558 IDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLV---HEGKLPD 613
>sp|B4U7U4|FTSH_HYDS0 ATP-dependent zinc metalloprotease FtsH OS=Hydrogenobaculum sp.
(strain Y04AAS1) GN=ftsH PE=3 SV=1
Length = 636
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/476 (47%), Positives = 319/476 (67%), Gaps = 17/476 (3%)
Query: 132 YIGSLGGIGTSGVGSSSSYAPKELNKEVMPEKNVKTFKDVKGCDDAKQELVEVVEYLKNP 191
+I + +G G + S+ + + + NVK +V G D+ K+E+ EV+EYLK+P
Sbjct: 127 WILMMRQMGNGGPTRAFSFGKSKAKVYIEEKPNVK-LDNVAGMDEVKEEVAEVIEYLKDP 185
Query: 192 SKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVR 251
++F +LGG+ PKGIL G PG GKTLLAKA+AGEA VPF +GS+F EMFVGVGA R+R
Sbjct: 186 ARFRKLGGRPPKGILFYGEPGVGKTLLAKALAGEAHVPFISVSGSDFVEMFVGVGAARMR 245
Query: 252 SLFQAAKKKAPCIIFIDEIDAVGSTRKQWE----GHTKKTLHQLLVEMDGFEQNEGIILM 307
F+ A+K APCI+FIDEIDAVG +R ++TL+QLLVEMDGF+ +EGI+++
Sbjct: 246 DTFETARKNAPCIVFIDEIDAVGRSRGAINLGGNDEREQTLNQLLVEMDGFDTSEGILII 305
Query: 308 AATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLQDKPLADDVDVKAIARGTP 367
AATN PDILDPAL RPGRFDR I +P PDV+GR EIL+++ ++KPLA DVD++ IAR TP
Sbjct: 306 AATNRPDILDPALLRPGRFDRQIFIPKPDVKGRYEILKVHAKNKPLAKDVDLELIARATP 365
Query: 368 GFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKDRILMGTERKTMFISEESKKLTAYH 427
GF GADL N++N AA+ AA + + +LE A DR++MG ER+ M IS + K+ A H
Sbjct: 366 GFTGADLENILNEAALLAARKRKDLIHMEDLEEAIDRVMMGLERRGMAISPKEKEKIAVH 425
Query: 428 ESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLPSSDETSVSQKQLLARLDVCMGGRV 487
E+GHA++ A P+HK +I+PRG ALG+ TQLP D+ + LL+R+ + MGGR
Sbjct: 426 EAGHALMGLMMPDADPLHKVSIIPRGMALGVTTQLPIDDKHIYDKADLLSRIHILMGGRC 485
Query: 488 AEELIFGRDHITTGASSDLHSATELAHYMVSNCGMSDAIGPVHIK------------DRP 535
AEE+ +G+D ITTGA +DL AT+LA+ +V+ GMS+ +GP+ ++
Sbjct: 486 AEEVFYGKDGITTGAENDLQRATDLAYRIVATWGMSENVGPISVRRNINPFLGGSTVTEG 545
Query: 536 SSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHALANALLEYETLSAEEIKRIL 591
S ++ ID EV KLL AY+ K ++ ++++ L ++ L+E ET+ +E IL
Sbjct: 546 SPDLLKEIDKEVQKLLASAYEETKRVIAENKEALSSVVKRLIEKETIDCKEFVEIL 601
>sp|B1GZK7|FTSH_UNCTG ATP-dependent zinc metalloprotease FtsH OS=Uncultured termite group
1 bacterium phylotype Rs-D17 GN=ftsH PE=3 SV=1
Length = 631
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 225/445 (50%), Positives = 304/445 (68%), Gaps = 23/445 (5%)
Query: 167 TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEA 226
TFKDV GCD+AK+EL E++E+LK+P++F +LGGK+PKG+LL G+PGTGKTLLAKA+AGEA
Sbjct: 154 TFKDVAGCDEAKEELQELIEFLKDPARFQKLGGKIPKGVLLFGSPGTGKTLLAKAVAGEA 213
Query: 227 GVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG---- 282
VPFF +GSEF EMFVGVGA RVR LF +K APC++FIDEIDAVG R G
Sbjct: 214 NVPFFSSSGSEFVEMFVGVGASRVRDLFDHGRKSAPCLLFIDEIDAVGRHRFAGIGGGHD 273
Query: 283 HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQE 342
++TL+QLLVEMDGF+ EG+IL+AATN PD+LDPAL RPGRFDR +++ +PD++ R+E
Sbjct: 274 EREQTLNQLLVEMDGFDSKEGVILIAATNRPDVLDPALLRPGRFDRQVIILSPDLKDREE 333
Query: 343 ILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAK 402
IL ++ + L +DV++ IAR TPGF GADLANLVN AA+ AA + + +E A
Sbjct: 334 ILGVHSKKIRLDNDVNLNVIARRTPGFVGADLANLVNEAALLAARNSQNAVNMKNMEEAI 393
Query: 403 DRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQL 462
DRIL G +RK+ +S++ K + AYHE+GH +VA A P+HK +I+PRG ALG QL
Sbjct: 394 DRILAGPQRKSRLMSDKEKNIIAYHEAGHTLVAKFLPSADPVHKVSIIPRGPALGYTLQL 453
Query: 463 PSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGM 522
P D+ S+ +LL +L + GGRVAEEL+F ITTGA +D+ AT +A MV+ GM
Sbjct: 454 PEEDKYLTSKSELLDKLSILFGGRVAEELVFS--EITTGAQNDISKATGIAMRMVTEFGM 511
Query: 523 SDAIGPVHIKDRPSSEM----------------QSRIDAEVVKLLREAYDRVKALLKKHE 566
SD IGP+ ++ RP+ E+ ID EV ++ + R ++K +
Sbjct: 512 SDKIGPMALQ-RPNEEVFLGRDISRDARHSGKTSELIDEEVKNIIYSSKSRASKIIKDNV 570
Query: 567 KQLHALANALLEYETLSAEEIKRIL 591
L+ + + LLE E LS E+I +I+
Sbjct: 571 SILNKIVSYLLERENLSGEDIDKII 595
>sp|C5CES8|FTSH_KOSOT ATP-dependent zinc metalloprotease FtsH OS=Kosmotoga olearia
(strain TBF 19.5.1) GN=ftsH PE=3 SV=1
Length = 645
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 245/512 (47%), Positives = 323/512 (63%), Gaps = 34/512 (6%)
Query: 100 NKSRFAQELISTILFTVAVGLVWLMGAAALQKYIGSLGGIGTSGVGSSSSYAPKELNKEV 159
N S F L+ TI+ + +W + SL G + + S A K L+ +
Sbjct: 107 NDSLFWVNLLGTIIPLAIIVFIWFFA-------MRSLSGRNSQAFTFTKSPAKKYLSND- 158
Query: 160 MPEKNVKTFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLA 219
KNV TFKDV G D+A +EL + V YLKNP+ F++ G ++PKGILL G PGTGKTLLA
Sbjct: 159 ---KNV-TFKDVAGVDEAIEELQDAVNYLKNPNAFSQTGARMPKGILLVGPPGTGKTLLA 214
Query: 220 KAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQ 279
+A+AGEA VPFFY +GS+F E+FVGVGA RVR LF AK AP IIFIDEIDAVG R
Sbjct: 215 RAVAGEANVPFFYISGSDFVELFVGVGAARVRDLFSQAKASAPSIIFIDEIDAVGRHRGA 274
Query: 280 WEG----HTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNP 335
G ++TL+Q+LVEMDGF+ G+I+MAATN PDILD AL RPGRFD+ I V P
Sbjct: 275 GLGGGHDEREQTLNQILVEMDGFDAKTGVIVMAATNRPDILDHALLRPGRFDKKITVDPP 334
Query: 336 DVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTA 395
DV+GR EIL+++++ KP+ DVDV +AR TPGF GADL NLVN AAI AA + +
Sbjct: 335 DVKGRAEILKIHMRGKPVDPDVDVWLLARRTPGFVGADLENLVNEAAILAARRKKKIIGM 394
Query: 396 TELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSA 455
ELE A DR++ G RK+ ++ + KK+ AYHE GHAIV A+P+HK T++PRGSA
Sbjct: 395 KELEEAIDRVIAGPARKSRIMNPKEKKIVAYHELGHAIVGLALPNAYPVHKVTVIPRGSA 454
Query: 456 -LGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAH 514
LG LPS D VS+ ++L L +GGR AEE++FG ITTGA++DL AT++A
Sbjct: 455 SLGFTESLPSEDRYLVSRSEMLDNLAQILGGRAAEEIVFG--EITTGAANDLERATQMAR 512
Query: 515 YMVSNCGMSDAIGPVHIKDRP---------------SSEMQSRIDAEVVKLLREAYDRVK 559
MV GMSD +GP+ S E+ S ID EV K++ EA++R +
Sbjct: 513 TMVCQLGMSDRLGPIAWGKEEGEVFLGRELTRMRNYSEEIASEIDNEVKKIVIEAHERAR 572
Query: 560 ALLKKHEKQLHALANALLEYETLSAEEIKRIL 591
L++K +L A L+E ET++ +E+ I+
Sbjct: 573 KLVEKFRDKLDKAAEYLIEKETITGKELAEIV 604
>sp|A0LN68|FTSH_SYNFM ATP-dependent zinc metalloprotease FtsH OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=ftsH PE=3 SV=1
Length = 647
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 230/455 (50%), Positives = 318/455 (69%), Gaps = 24/455 (5%)
Query: 158 EVMPEKNVK-TFKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKT 216
++ EK + TF DV G D+AK EL E+V++LK+P KF RLGG++PKG+LL GAPGTGKT
Sbjct: 175 KIFAEKEITITFDDVAGIDEAKGELEEIVQFLKDPGKFQRLGGRIPKGVLLVGAPGTGKT 234
Query: 217 LLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGST 276
LLAKA+AGEAGVPFF +GSEF EMFVGVGA RVR LF AK APCIIFIDE+DA+G
Sbjct: 235 LLAKAVAGEAGVPFFSMSGSEFVEMFVGVGAARVRDLFGQAKDHAPCIIFIDELDALGKA 294
Query: 277 R--KQWEGHTKK--TLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVV 332
R GH ++ TL+QLLVEMDGF+ G+I+MAATN P+ILDPAL RPGRFDRH+ +
Sbjct: 295 RGLNPIGGHDEREQTLNQLLVEMDGFDPRSGVIIMAATNRPEILDPALLRPGRFDRHVAI 354
Query: 333 PNPDVRGRQEILELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEK 392
PD+RGR+ IL +++++ L +VD+K IA TPGF GADLANLVN AA+ AA ++
Sbjct: 355 DKPDIRGREAILRVHVKEVKLGSEVDLKKIAGMTPGFVGADLANLVNEAALVAARRDRDE 414
Query: 393 LTATELEFAKDRILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPR 452
+T + + A DRI+ G E+K ++ + K++ AYHE+GHA+VA P++K +I+PR
Sbjct: 415 VTMADFQEAADRIIGGLEKKNRAMNPKEKEIVAYHEAGHALVAMLLPNVDPVNKVSIIPR 474
Query: 453 G-SALGMVTQLPSSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATE 511
G +ALG QLP+ D +++ +LL RL V +GGRV+EE+IFG ++TGA +DL AT+
Sbjct: 475 GIAALGYTQQLPTEDRYLMTRNELLDRLQVLLGGRVSEEIIFG--DVSTGAQNDLQRATD 532
Query: 512 LAHYMVSNCGMSDAIGPV---------HI------KDRPSSEMQSR-IDAEVVKLLREAY 555
+A MV GMS+ +GP+ H+ ++R SEM ++ ID E+ +++ +A+
Sbjct: 533 IARSMVMEYGMSERLGPLTYTRDPRSAHLDLGLGSRERDYSEMIAQEIDEEITRIVEDAH 592
Query: 556 DRVKALLKKHEKQLHALANALLEYETLSAEEIKRI 590
++V+A LK+ L LA LLE E++ EE+K+
Sbjct: 593 EKVRATLKRERGCLEKLAKILLEKESIDGEELKQF 627
>sp|O69076|FTSH_STRPN ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
serotype 4 (strain ATCC BAA-334 / TIGR4) GN=ftsH PE=3
SV=3
Length = 652
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/454 (50%), Positives = 310/454 (68%), Gaps = 21/454 (4%)
Query: 168 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 227
F DV G ++ KQELVEVVE+LK+P +FT+LG ++P G+LL G PGTGKTLLAKA+AGEAG
Sbjct: 186 FSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAG 245
Query: 228 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG----H 283
VPFF +GS+F EMFVGVGA RVRSLF+ AKK AP IIFIDEIDAVG R G
Sbjct: 246 VPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDE 305
Query: 284 TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEI 343
++TL+QLL+EMDGFE NEGII++AATN D+LDPAL RPGRFDR ++V PDV+GR+ I
Sbjct: 306 REQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAI 365
Query: 344 LELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKD 403
L+++ ++KPLA+DVD+K +A+ TPGF GADL N++N AA+ AA + A++++ A+D
Sbjct: 366 LKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAED 425
Query: 404 RILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLP 463
R++ G +K +S++ ++L AYHE+GH IV A +HK TI+PRG A G + LP
Sbjct: 426 RVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALP 485
Query: 464 SSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMS 523
D+ +S++ + +L MGGRVAEE+IF TTGAS+D AT++A MV+ GMS
Sbjct: 486 KEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMS 543
Query: 524 DAIGPVHI------------KDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHA 571
+ +GPV + S + ID EV LL EA ++ +++ + +
Sbjct: 544 EKLGPVQYEGNHAMLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKL 603
Query: 572 LANALLEYETLSAEEIKRILLPYREGQLPEQQEE 605
+A ALL+YETL + +IK + Y G++PE EE
Sbjct: 604 IAEALLKYETLDSTQIKAL---YETGKMPEAVEE 634
>sp|P59652|FTSH_STRR6 ATP-dependent zinc metalloprotease FtsH OS=Streptococcus pneumoniae
(strain ATCC BAA-255 / R6) GN=ftsH PE=3 SV=1
Length = 652
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 227/454 (50%), Positives = 310/454 (68%), Gaps = 21/454 (4%)
Query: 168 FKDVKGCDDAKQELVEVVEYLKNPSKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAG 227
F DV G ++ KQELVEVVE+LK+P +FT+LG ++P G+LL G PGTGKTLLAKA+AGEAG
Sbjct: 186 FSDVAGAEEEKQELVEVVEFLKDPKRFTKLGARIPAGVLLEGPPGTGKTLLAKAVAGEAG 245
Query: 228 VPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEG----H 283
VPFF +GS+F EMFVGVGA RVRSLF+ AKK AP IIFIDEIDAVG R G
Sbjct: 246 VPFFSISGSDFVEMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQRGVGLGGGNDE 305
Query: 284 TKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEI 343
++TL+QLL+EMDGFE NEGII++AATN D+LDPAL RPGRFDR ++V PDV+GR+ I
Sbjct: 306 REQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAI 365
Query: 344 LELYLQDKPLADDVDVKAIARGTPGFNGADLANLVNIAAIKAAVDGGEKLTATELEFAKD 403
L+++ ++KPLA+DVD+K +A+ TPGF GADL N++N AA+ AA + A++++ A+D
Sbjct: 366 LKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAED 425
Query: 404 RILMGTERKTMFISEESKKLTAYHESGHAIVAFNTEGAHPIHKATIMPRGSALGMVTQLP 463
R++ G +K +S++ ++L AYHE+GH IV A +HK TI+PRG A G + LP
Sbjct: 426 RVIAGPSKKDKTVSQKERELVAYHEAGHTIVGLVLSNARVVHKVTIVPRGRAGGYMIALP 485
Query: 464 SSDETSVSQKQLLARLDVCMGGRVAEELIFGRDHITTGASSDLHSATELAHYMVSNCGMS 523
D+ +S++ + +L MGGRVAEE+IF TTGAS+D AT++A MV+ GMS
Sbjct: 486 KEDQMLLSKEDMKEQLAGLMGGRVAEEIIFNVQ--TTGASNDFEQATQMARAMVTEYGMS 543
Query: 524 DAIGPVHI------------KDRPSSEMQSRIDAEVVKLLREAYDRVKALLKKHEKQLHA 571
+ +GPV + S + ID EV LL EA ++ +++ + +
Sbjct: 544 EKLGPVQYEGNHAMLGAQSPQKSISEQTAYEIDEEVRSLLNEARNKAAEIIQSNRETHKL 603
Query: 572 LANALLEYETLSAEEIKRILLPYREGQLPEQQEE 605
+A ALL+YETL + +IK + Y G++PE EE
Sbjct: 604 IAEALLKYETLDSTQIKAL---YETGKMPEAVEE 634
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 228,089,710
Number of Sequences: 539616
Number of extensions: 10069676
Number of successful extensions: 41912
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1166
Number of HSP's successfully gapped in prelim test: 1082
Number of HSP's that attempted gapping in prelim test: 38679
Number of HSP's gapped (non-prelim): 2762
length of query: 613
length of database: 191,569,459
effective HSP length: 123
effective length of query: 490
effective length of database: 125,196,691
effective search space: 61346378590
effective search space used: 61346378590
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)