Query 007197
Match_columns 613
No_of_seqs 237 out of 816
Neff 5.5
Searched_HMMs 46136
Date Thu Mar 28 20:16:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007197.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007197hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1021 Acetylglucosaminyltran 100.0 1.8E-68 3.8E-73 586.4 26.1 374 175-567 70-460 (464)
2 PF03016 Exostosin: Exostosin 100.0 1.9E-52 4.1E-57 429.6 19.2 285 174-516 1-302 (302)
3 KOG2264 Exostosin EXT1L [Signa 99.9 2.2E-21 4.8E-26 209.4 14.5 334 176-563 157-527 (907)
4 KOG1022 Acetylglucosaminyltran 99.2 6.9E-11 1.5E-15 128.8 11.2 236 245-531 130-385 (691)
5 cd03814 GT1_like_2 This family 95.7 0.075 1.6E-06 54.3 10.3 95 435-537 258-352 (364)
6 cd03820 GT1_amsD_like This fam 94.8 0.054 1.2E-06 54.2 6.0 94 435-537 244-339 (348)
7 cd03801 GT1_YqgM_like This fam 94.2 0.23 5E-06 49.7 8.9 94 434-537 266-362 (374)
8 cd03794 GT1_wbuB_like This fam 94.0 0.08 1.7E-06 53.9 5.2 94 434-537 285-386 (394)
9 cd03822 GT1_ecORF704_like This 93.1 0.12 2.5E-06 53.1 4.7 92 435-537 259-354 (366)
10 TIGR03088 stp2 sugar transfera 92.8 0.95 2.1E-05 47.8 11.3 91 435-537 264-359 (374)
11 PLN02871 UDP-sulfoquinovose:DA 92.8 0.35 7.5E-06 53.7 8.3 95 435-538 323-421 (465)
12 PF00534 Glycos_transf_1: Glyc 92.3 0.19 4E-06 47.1 4.6 86 434-529 83-170 (172)
13 cd03821 GT1_Bme6_like This fam 92.1 0.75 1.6E-05 46.7 9.1 91 435-537 273-366 (375)
14 cd03808 GT1_cap1E_like This fa 92.0 0.28 6E-06 49.4 5.7 92 435-536 255-349 (359)
15 cd03823 GT1_ExpE7_like This fa 91.9 1.2 2.6E-05 45.3 10.2 88 435-531 254-343 (359)
16 cd03818 GT1_ExpC_like This fam 91.5 1 2.2E-05 48.4 9.8 135 388-537 243-387 (396)
17 cd03809 GT1_mtfB_like This fam 91.1 0.31 6.7E-06 49.9 5.0 93 434-538 263-357 (365)
18 TIGR03449 mycothiol_MshA UDP-N 90.9 0.83 1.8E-05 49.0 8.3 98 434-539 293-390 (405)
19 cd03806 GT1_ALG11_like This fa 90.9 1.8 3.9E-05 47.6 11.1 134 388-537 273-413 (419)
20 PRK09814 beta-1,6-galactofuran 90.8 0.29 6.4E-06 51.9 4.7 90 434-536 217-317 (333)
21 cd03807 GT1_WbnK_like This fam 90.4 0.51 1.1E-05 47.7 5.8 93 435-537 260-353 (365)
22 cd04962 GT1_like_5 This family 90.0 0.53 1.1E-05 49.2 5.8 92 436-537 263-357 (371)
23 cd03819 GT1_WavL_like This fam 89.7 0.68 1.5E-05 47.8 6.2 93 434-537 254-352 (355)
24 cd03800 GT1_Sucrose_synthase T 89.7 0.51 1.1E-05 49.6 5.3 95 435-537 294-389 (398)
25 PF00852 Glyco_transf_10: Glyc 89.3 0.84 1.8E-05 49.4 6.8 78 388-474 176-261 (349)
26 cd05844 GT1_like_7 Glycosyltra 88.9 0.84 1.8E-05 47.6 6.2 92 435-537 256-357 (367)
27 cd03798 GT1_wlbH_like This fam 88.5 0.69 1.5E-05 46.6 5.1 64 434-503 269-332 (377)
28 PRK15427 colanic acid biosynth 88.4 2.2 4.8E-05 46.7 9.4 93 434-537 289-392 (406)
29 TIGR02149 glgA_Coryne glycogen 88.4 1.4 3.1E-05 46.5 7.7 94 434-537 271-373 (388)
30 cd03811 GT1_WabH_like This fam 88.4 1.2 2.6E-05 44.5 6.8 85 436-526 256-341 (353)
31 cd04949 GT1_gtfA_like This fam 87.3 0.86 1.9E-05 48.1 5.1 94 435-537 270-365 (372)
32 cd04951 GT1_WbdM_like This fam 86.7 1.1 2.3E-05 46.3 5.3 93 436-537 255-347 (360)
33 cd03792 GT1_Trehalose_phosphor 85.4 8.8 0.00019 40.8 11.7 93 434-537 264-358 (372)
34 TIGR03087 stp1 sugar transfera 84.7 1.6 3.4E-05 47.1 5.7 92 436-538 290-384 (397)
35 cd03795 GT1_like_4 This family 82.6 2.8 6.1E-05 43.1 6.3 93 435-537 255-353 (357)
36 cd03804 GT1_wbaZ_like This fam 82.6 1.2 2.5E-05 46.8 3.5 62 435-503 253-314 (351)
37 TIGR02918 accessory Sec system 82.2 7.9 0.00017 44.1 10.1 92 436-537 385-486 (500)
38 PLN02949 transferase, transfer 82.2 13 0.00029 41.8 11.8 93 435-537 346-443 (463)
39 KOG1387 Glycosyltransferase [C 81.5 4.1 8.9E-05 44.5 7.0 94 435-534 348-442 (465)
40 PF13524 Glyco_trans_1_2: Glyc 81.1 3.7 8E-05 34.9 5.5 80 447-537 2-83 (92)
41 cd03816 GT1_ALG1_like This fam 80.5 9.9 0.00021 41.7 9.9 123 388-532 269-399 (415)
42 cd03802 GT1_AviGT4_like This f 80.2 3.6 7.7E-05 42.1 6.0 40 435-476 235-276 (335)
43 PRK15484 lipopolysaccharide 1, 79.7 3.4 7.3E-05 44.7 5.9 97 434-538 267-365 (380)
44 cd03817 GT1_UGDG_like This fam 79.4 5.5 0.00012 40.4 7.1 90 434-534 269-360 (374)
45 cd04955 GT1_like_6 This family 79.1 3.9 8.4E-05 42.2 6.0 90 435-537 259-351 (363)
46 PRK00654 glgA glycogen synthas 78.8 8.3 0.00018 43.0 8.8 91 436-537 349-449 (466)
47 cd03805 GT1_ALG2_like This fam 78.5 3.3 7.1E-05 43.9 5.3 94 435-537 291-385 (392)
48 cd03813 GT1_like_3 This family 77.8 13 0.00028 41.6 10.0 92 434-532 361-457 (475)
49 PRK14098 glycogen synthase; Pr 77.5 27 0.00059 39.5 12.5 91 436-537 374-472 (489)
50 cd03793 GT1_Glycogen_synthase_ 77.2 2.3 4.9E-05 49.3 3.8 114 434-555 465-588 (590)
51 PHA01630 putative group 1 glyc 76.2 4.7 0.0001 43.2 5.7 41 435-476 201-241 (331)
52 PRK14099 glycogen synthase; Pr 75.4 6.3 0.00014 44.5 6.7 93 436-539 361-467 (485)
53 cd03799 GT1_amsK_like This is 74.0 7.2 0.00016 40.0 6.2 95 434-537 246-348 (355)
54 TIGR02095 glgA glycogen/starch 73.3 6.8 0.00015 43.5 6.3 91 436-537 358-459 (473)
55 TIGR02472 sucr_P_syn_N sucrose 72.3 5.9 0.00013 43.7 5.4 94 436-537 329-427 (439)
56 PRK09922 UDP-D-galactose:(gluc 71.7 5.1 0.00011 42.6 4.6 40 435-475 249-288 (359)
57 cd03825 GT1_wcfI_like This fam 71.4 11 0.00024 38.9 6.9 91 434-532 255-345 (365)
58 cd03796 GT1_PIG-A_like This fa 68.3 7.7 0.00017 41.8 5.1 42 434-476 260-301 (398)
59 PLN02939 transferase, transfer 64.1 29 0.00063 42.7 9.2 95 438-539 851-955 (977)
60 cd03791 GT1_Glycogen_synthase_ 61.7 15 0.00032 40.6 5.9 85 436-529 363-457 (476)
61 cd04946 GT1_AmsK_like This fam 61.4 18 0.00039 39.5 6.4 92 436-536 301-397 (407)
62 KOG2619 Fucosyltransferase [Ca 59.0 76 0.0017 35.1 10.5 159 341-520 156-320 (372)
63 PRK10307 putative glycosyl tra 57.9 11 0.00023 40.9 3.9 95 434-538 294-395 (412)
64 TIGR02468 sucrsPsyn_pln sucros 56.3 17 0.00036 45.2 5.5 94 436-539 560-659 (1050)
65 PRK13608 diacylglycerol glucos 49.4 1.2E+02 0.0026 32.9 10.4 84 436-533 266-354 (391)
66 PHA01633 putative glycosyl tra 48.6 17 0.00038 39.4 3.6 41 435-476 215-255 (335)
67 TIGR00236 wecB UDP-N-acetylglu 47.7 1.6E+02 0.0036 31.2 10.9 36 434-475 265-300 (365)
68 TIGR01133 murG undecaprenyldip 46.2 33 0.00072 35.7 5.2 87 436-530 243-334 (348)
69 PLN02605 monogalactosyldiacylg 45.5 57 0.0012 35.2 7.0 86 436-532 275-363 (382)
70 PRK05749 3-deoxy-D-manno-octul 45.3 52 0.0011 35.9 6.7 106 435-560 311-419 (425)
71 PRK00726 murG undecaprenyldiph 45.1 82 0.0018 33.2 8.0 105 435-561 244-354 (357)
72 PF13692 Glyco_trans_1_4: Glyc 43.6 18 0.00038 32.2 2.4 41 435-476 62-103 (135)
73 PLN02316 synthase/transferase 43.1 33 0.00072 42.6 5.2 38 439-476 915-952 (1036)
74 cd04950 GT1_like_1 Glycosyltra 40.7 42 0.00091 36.1 5.1 40 435-475 265-309 (373)
75 PRK15490 Vi polysaccharide bio 37.8 83 0.0018 36.8 7.0 40 436-476 465-504 (578)
76 cd01635 Glycosyltransferase_GT 36.3 43 0.00094 31.4 3.9 41 435-476 173-213 (229)
77 cd03812 GT1_CapH_like This fam 35.8 45 0.00098 34.3 4.2 41 435-476 258-298 (358)
78 PLN00142 sucrose synthase 32.6 77 0.0017 38.6 5.9 97 438-540 660-760 (815)
79 COG4128 Zot Zonula occludens t 31.5 42 0.00091 36.3 3.1 33 152-188 285-317 (398)
80 cd03788 GT1_TPS Trehalose-6-Ph 29.6 46 0.001 37.3 3.3 91 434-534 351-445 (460)
81 PRK13609 diacylglycerol glucos 29.4 1.7E+02 0.0036 31.3 7.4 86 436-532 266-353 (380)
82 PRK15179 Vi polysaccharide bio 27.7 2.2E+02 0.0048 34.1 8.5 40 436-476 584-623 (694)
83 PF00919 UPF0004: Uncharacteri 27.7 57 0.0012 29.1 2.9 31 235-266 12-43 (98)
84 PHA03392 egt ecdysteroid UDP-g 26.9 1.9E+02 0.0041 33.2 7.6 138 388-535 298-446 (507)
85 PLN02275 transferase, transfer 26.8 1.6E+02 0.0034 31.7 6.7 77 388-476 261-341 (371)
86 COG1819 Glycosyl transferases, 26.8 5E+02 0.011 28.8 10.7 149 363-531 217-381 (406)
87 PF05686 Glyco_transf_90: Glyc 24.4 6.6E+02 0.014 27.9 11.1 162 383-565 153-321 (395)
88 PRK00025 lpxB lipid-A-disaccha 24.4 1.1E+02 0.0023 32.6 4.8 35 436-476 254-288 (380)
89 PF15024 Glyco_transf_18: Glyc 22.0 83 0.0018 36.6 3.5 40 434-476 332-371 (559)
90 TIGR02470 sucr_synth sucrose s 21.8 1.7E+02 0.0037 35.6 6.1 90 445-540 645-737 (784)
91 TIGR02400 trehalose_OtsA alpha 21.0 1.9E+02 0.0041 32.7 6.0 87 434-531 346-437 (456)
No 1
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=100.00 E-value=1.8e-68 Score=586.37 Aligned_cols=374 Identities=36% Similarity=0.619 Sum_probs=336.0
Q ss_pred CCCceEEecCCchhhhHHHHHhcccCC-cccc---cccccccCCCCCCCCCCCC---cccCCccccccchhhHHHHHHhh
Q 007197 175 CGGRYIYVHDLPSRFNEDMLKDCKSLS-LWTN---MCKYTANAGLGPPLANTEG---VFSNTGWYTTNQFAVDVIFNNRM 247 (613)
Q Consensus 175 c~gr~IYVYdLP~~FN~~ll~~c~~~~-~w~~---~C~~~~n~G~gp~~~~~~g---~~~~~~Wy~T~qyalE~ifherL 247 (613)
|.+.+||||++|+.||.++++.|.... .|.. +|.+..|+++++.+....| .+...+|+.|+||++|.+||++|
T Consensus 70 ~~~~~v~~~~~~~~F~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~E~~~~~~~ 149 (464)
T KOG1021|consen 70 CAGASVYVYNLPSGFDVSLLLFHKQIPTSPNNKKFMCSYKLNEKRGKVYVYHEGNKPLFHTPSWCLTDQYASEGIFHNRM 149 (464)
T ss_pred ccCcceeeeccchhhhhhhhccCccccccCcchhhhhhhhhhcccCceEEecCCCCccccCCCcccccchhHHHHHHHHH
Confidence 889999999999999999999998875 6665 9999999999998776555 35677999999999999999999
Q ss_pred --hcCccccCCcCCceEEEEccccccchhhcccCCC----cchhhHHHHHHHHHHhcCccccccCCcCeEEEcccccccc
Q 007197 248 --KQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYN----ISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDF 321 (613)
Q Consensus 248 --l~S~~rT~DPeeAdlFyVP~y~~l~~~r~~~~~n----~s~rd~l~~~lv~~L~~~PyWnRsgGrDHf~V~~~~~WDf 321 (613)
..++|||.||++||+||||||+++++++++..++ ...++.++..++.|+++||||||++|+|||||++|+.|++
T Consensus 150 ~~~~~~~Rt~dp~~Ad~f~vPf~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~W~Rs~G~DH~~v~~~~~~~~ 229 (464)
T KOG1021|consen 150 LRRESAFRTLDPLEADAFYVPFYASLDYNRALLWPDERVNAILRSILQDYIVALLSKQPYWNRSSGRDHFFVACHDWGDF 229 (464)
T ss_pred hcccCceecCChhhCcEEEEcceeeEehhhhcccCCcccchHHHHHHHHHHHHHHhcCchhhccCCCceEEEeCCcchhe
Confidence 5789999999999999999999999988754432 2345667888889999999999999999999999999998
Q ss_pred CCCCCCCCccccccccccccccceEEEeecCCCCCCCCCCCCCCccCCCCCcccchhhhhccccCCCeeEEeccCCCCCC
Q 007197 322 RRGSDEESDWGSKLLFLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGD 401 (613)
Q Consensus 322 rr~~d~~~dwG~~l~~lp~~~N~til~ve~~~w~~~d~~iPypt~fhP~kD~~vp~w~~~~~~~~R~~L~~FaG~~~~~~ 401 (613)
.+. .+|+..+..++++.|++.+..++.+|. +|+++||+..+||.+..+. .|+..++..+|++|++|+|++ .
T Consensus 230 ~~~----~~~~~~~~~i~~~~n~a~ls~~~~~~~-~dv~iP~~~~~~~~~~~~~-~~~~~~~~~~R~~L~~F~G~~---~ 300 (464)
T KOG1021|consen 230 RRR----SDWGASISLIPEFCNGALLSLEFFPWN-KDVAIPYPTIPHPLSPPEN-SWQGGVPFSNRPILAFFAGAP---A 300 (464)
T ss_pred eec----cchhhHHHHHHhhCCcceeecccccCC-CcccCCCccCcCccCcccc-ccccCCCCCCCceEEEEeccc---c
Confidence 875 478888888999999899999998887 8999999999999999888 898888889999999999996 4
Q ss_pred ChhhHHHHHHHhhc-CCCceeeeecCCCCcCCCchhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccc
Q 007197 402 PLSIRGQLMEQCRN-SEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYT 480 (613)
Q Consensus 402 ~~~IR~~L~~~~~~-~~~~~~v~c~~g~~~c~~~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~ 480 (613)
++.||+.|+++|++ .+.+..++|..|..+|+++..|++.|++|+|||||+||+++++|+||||++|||||||+|+ .
T Consensus 301 ~~~iR~~L~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~---~ 377 (464)
T KOG1021|consen 301 GGQIRSILLDLWKKDPDTEVFVNCPRGKVSCDRPLNYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDG---I 377 (464)
T ss_pred CCcHHHHHHHHhhcCcCccccccCCCCccccCCcchHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCC---c
Confidence 57899999999999 4558899999888889999999999999999999999999999999999999999999998 7
Q ss_pred cccccCCCCCcceEEEeecchhccccccHHHHHccCCHHHHHHHHHHHhh-hcceeeeeC--CCCCcCCcCCHHHHHHHH
Q 007197 481 QYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVIN-LIPRVIYAD--PRSKLATLKDSFDVAVQS 557 (613)
Q Consensus 481 qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~sIp~e~i~~Mr~~l~~-v~~~f~Y~~--p~~~~~~~~DAFd~~l~~ 557 (613)
||||++++||++|||+|++++|+++ |.++|.+|+.+++.+||+++++ +.++|.+.. |... +||||+++++
T Consensus 378 ~lpf~~~~d~~~fSV~v~~~~v~~~---~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~~~~~~~----~da~~~~~~~ 450 (464)
T KOG1021|consen 378 QLPFGDVLDWTEFSVFVPEKDVPEL---IKNILLSIPEEEVLRMRENVIRLVPRHFLKKPPGPPKR----GDAFHMILHS 450 (464)
T ss_pred ccCcCCCccceEEEEEEEHHHhhhH---HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCCCCCCCc----chhHHHHHhh
Confidence 9999999999999999999999973 5999999999999999999995 888888877 4443 8999999999
Q ss_pred HHHHHHHhhH
Q 007197 558 IIDRVTRLRR 567 (613)
Q Consensus 558 L~~Rv~~ir~ 567 (613)
|+.|+..++.
T Consensus 451 v~~r~~~~~~ 460 (464)
T KOG1021|consen 451 LWRRLHKLRS 460 (464)
T ss_pred hhhccccccc
Confidence 9999988764
No 2
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=100.00 E-value=1.9e-52 Score=429.57 Aligned_cols=285 Identities=31% Similarity=0.548 Sum_probs=215.3
Q ss_pred CCCCceEEecCCchhhhHHHHHhcccCCcccccccccccCCCCCCCCCCCCcccCCccccccchhhHHHHHHhhhcCccc
Q 007197 174 PCGGRYIYVHDLPSRFNEDMLKDCKSLSLWTNMCKYTANAGLGPPLANTEGVFSNTGWYTTNQFAVDVIFNNRMKQYECL 253 (613)
Q Consensus 174 ~c~gr~IYVYdLP~~FN~~ll~~c~~~~~w~~~C~~~~n~G~gp~~~~~~g~~~~~~Wy~T~qyalE~ifherLl~S~~r 253 (613)
+|.+++|||||||++||.+++.... .....|+.+.||++|.+||++|++|+++
T Consensus 1 ~~~~lkVYVY~lp~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~e~~l~~~l~~s~~~ 53 (302)
T PF03016_consen 1 SHRGLKVYVYPLPPKFNKDLLDPRE---------------------------DEQCSWYETSQYALEVILHEALLNSPFR 53 (302)
T ss_pred CCCCCEEEEEeCCccccccceeccc---------------------------cccCCCcccccchHHHHHHHHHHhCCcE
Confidence 5889999999999999999982110 1134677788999999999999999999
Q ss_pred cCCcCCceEEEEccccccchhhcccCCCcc--hhhHHHHHHHHHHhcCccccccCCcCeEEEccccccccCCCCCCCCcc
Q 007197 254 TNDSSIAAAIFVPFYAGFDIARYLWGYNIS--MRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESDW 331 (613)
Q Consensus 254 T~DPeeAdlFyVP~y~~l~~~r~~~~~n~s--~rd~l~~~lv~~L~~~PyWnRsgGrDHf~V~~~~~WDfrr~~d~~~dw 331 (613)
|.||+|||+||||++.++.. .+.|+.+.. ..+.+...+..+++++|||||++|+||||+.++ +|
T Consensus 54 T~dp~eAdlF~vP~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~w~r~~G~dH~~~~~~-------------~~ 119 (302)
T PF03016_consen 54 TDDPEEADLFFVPFYSSCYF-HHWWGSPNSGADRDSLSDALRHLLASYPYWNRSGGRDHFFVNSH-------------DR 119 (302)
T ss_pred eCCHHHCeEEEEEccccccc-ccccCCccchhhHHHHHHHHHHHHhcCchhhccCCCCeEEEecc-------------cc
Confidence 99999999999999999864 222222221 234455566778889999999999999999985 33
Q ss_pred ccccc-cccccccceEEEeecCCCCCCCCCCCCCCccCCCCCcccchhhhh-----------ccccCCCeeEEeccCCCC
Q 007197 332 GSKLL-FLPATKNMSMLVVESSPWGANDFAIPYPTYFHPSKDAEVFDWQNR-----------MRKLERKWLFSFAGAPRP 399 (613)
Q Consensus 332 G~~l~-~lp~~~N~til~ve~~~w~~~d~~iPypt~fhP~kD~~vp~w~~~-----------~~~~~R~~L~~FaG~~~~ 399 (613)
|.... ..+.+.+.++.++.. .+-.+..+|+|.+|+.+|.+... ....+|++|++|+|.+..
T Consensus 120 g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~Di~~P~~~~~~~~~~~~~~~~~~~~~R~~l~~f~g~~~~ 192 (302)
T PF03016_consen 120 GGCSFDRNPRLMNNSIRAVVA-------FSSFSSSCFRPGFDIVIPPFVPPSSLPDWRPWPQRPPARRPYLLFFAGTIRP 192 (302)
T ss_pred ccccccccHhhhccchhheec-------cCCCCcCcccCCCCeeccccccccccCCccccccCCccCCceEEEEeeeccc
Confidence 33322 334444445544411 11123556777777776665321 235789999999999876
Q ss_pred C---CChhhHHHHHHHhhcCCCceeeeecCCCCcCCCchhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 400 G---DPLSIRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 400 ~---~~~~IR~~L~~~~~~~~~~~~v~c~~g~~~c~~~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
. +++.+|+.|++.|++.+...... +...|.++.+|.+.|++|+|||+|+|++++++||+|||++|||||||+|+
T Consensus 193 ~~~~~~~~~r~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~ 269 (302)
T PF03016_consen 193 SSNDYSGGVRQRLLDECKSDPDFRCSD---GSETCPSPSEYMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDD 269 (302)
T ss_pred cccccchhhhhHHHHhcccCCcceeee---cccccccchHHHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCc
Confidence 5 44689999999998865432221 23345567789999999999999999999999999999999999999997
Q ss_pred CccccccccCCCCCcceEEEeecchhccccccHHHHHccC
Q 007197 477 SAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQI 516 (613)
Q Consensus 477 say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~sI 516 (613)
..+||+.-|||++|||+|+++++++ |++||++|
T Consensus 270 ---~~lPf~~~ldw~~fsv~v~~~~~~~----l~~iL~~i 302 (302)
T PF03016_consen 270 ---YVLPFEDVLDWSRFSVRVPEADLPE----LPEILRSI 302 (302)
T ss_pred ---ccCCcccccCHHHEEEEECHHHHHH----HHHHHhcC
Confidence 2234444489999999999999997 99999987
No 3
>KOG2264 consensus Exostosin EXT1L [Signal transduction mechanisms]
Probab=99.86 E-value=2.2e-21 Score=209.41 Aligned_cols=334 Identities=15% Similarity=0.252 Sum_probs=216.2
Q ss_pred CCceEEecCCchhhh-HHHHHhcccCCccc-ccccccccCCCCCCCCCCCCc---ccCCccccccchhhHHHHHHhhhcC
Q 007197 176 GGRYIYVHDLPSRFN-EDMLKDCKSLSLWT-NMCKYTANAGLGPPLANTEGV---FSNTGWYTTNQFAVDVIFNNRMKQY 250 (613)
Q Consensus 176 ~gr~IYVYdLP~~FN-~~ll~~c~~~~~w~-~~C~~~~n~G~gp~~~~~~g~---~~~~~Wy~T~qyalE~ifherLl~S 250 (613)
.++.+.--.+|.+-+ ..+...|+..+++. ++|..+ +||+..+++.... ++.++|. ...|.+-+...
T Consensus 157 LP~sllP~~~pr~l~pp~~~~~c~lhncfdySRCslt--SgfPVYvyd~D~~~~G~~~d~~l-------k~~fq~t~~~n 227 (907)
T KOG2264|consen 157 LPFSLLPLQIPRELEPPSQISPCQLHNCFDYSRCSLT--SGFPVYVYDSDIITSGQSEDEWL-------KQVFQETIPNN 227 (907)
T ss_pred eccccCcccCcccCCCccccCcccchhcccccccccc--CCceeEEeccceeecccchHHHH-------HHHHHHhcccc
Confidence 344444555555543 23566788888887 689887 7898777653211 1234453 35777778888
Q ss_pred ccccCCcCCceEEEEccccccchhhcccCCCcchhhHHHHHHHHHHhcCccccccCCcCeEEEccccccccCCCCCCCCc
Q 007197 251 ECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLVNWLTKRPEWGIMGGKDHFLVAGRITWDFRRGSDEESD 330 (613)
Q Consensus 251 ~~rT~DPeeAdlFyVP~y~~l~~~r~~~~~n~s~rd~l~~~lv~~L~~~PyWnRsgGrDHf~V~~~~~WDfrr~~d~~~d 330 (613)
.+.|.||+.||++.+-+-.- ..+.+.. ..++ +-|-+.||| |++|+||+++... |. ++
T Consensus 228 ~~~ve~pd~ACiyi~lvge~-------q~P~~l~----p~el-eklyslp~w-~~dg~Nhvl~Nl~------r~----s~ 284 (907)
T KOG2264|consen 228 VYLVETPDKACIYIHLVGEI-------QSPVVLT----PAEL-EKLYSLPHW-RTDGFNHVLFNLG------RP----SD 284 (907)
T ss_pred eeEeeCCCccEEEEEEeccc-------cCCCcCC----hHhh-hhhhcCccc-cCCCcceEEEEcc------Cc----cc
Confidence 99999999999987754321 1121111 1122 337789999 8999999999752 21 22
Q ss_pred cccccccccccccceEEEeecCCCC----CCCCCCCCCCccCCCCCcccchhhh--hccccCCCeeEEeccCCCCCCCh-
Q 007197 331 WGSKLLFLPATKNMSMLVVESSPWG----ANDFAIPYPTYFHPSKDAEVFDWQN--RMRKLERKWLFSFAGAPRPGDPL- 403 (613)
Q Consensus 331 wG~~l~~lp~~~N~til~ve~~~w~----~~d~~iPypt~fhP~kD~~vp~w~~--~~~~~~R~~L~~FaG~~~~~~~~- 403 (613)
-.+.+.....++ +|.+- +.+. +..|+.|.++-.|+... +.|++ .+-+.+|+||+.|+|.+++..+.
T Consensus 285 ~~n~lyn~~t~r--aivvQ--ssf~~~q~RpgfDl~V~pv~h~~~e---~~~~e~~p~vP~~RkyL~t~qgki~~~~ssL 357 (907)
T KOG2264|consen 285 TQNLLYNFQTGR--AIVVQ--SSFYTVQIRPGFDLPVDPVNHIAVE---KNFVELTPLVPFQRKYLITLQGKIESDNSSL 357 (907)
T ss_pred cccceeEeccCc--eEEEe--ecceeeeeccCCCcccCcccccccC---ccceecCcccchhhheeEEEEeeeccccccc
Confidence 223222222222 23331 1110 11233444444444322 33433 34578999999999988765432
Q ss_pred -hhHHHHHHHhhcCC-------CceeeeecCC---C--------CcCCCchhHHhhcccCeEEEc-cCCCCCC-----cc
Q 007197 404 -SIRGQLMEQCRNSE-------VGKLLECDFG---E--------SKCHSPSSIMQMFQTSIFCLQ-PQGDSYT-----RR 458 (613)
Q Consensus 404 -~IR~~L~~~~~~~~-------~~~~v~c~~g---~--------~~c~~~~~y~~~m~~SkFCL~-P~GDs~t-----sr 458 (613)
..+.-..++..+.+ ....+.|.+. . ..|.......+++..|+|||. |+||+-- -.
T Consensus 358 n~~~aF~~e~~adp~~~a~qds~i~qv~c~~t~k~Qe~~SLpewalcg~~~~RrqLlk~STF~lilpp~d~rv~S~~~~~ 437 (907)
T KOG2264|consen 358 NEFSAFSEELSADPSRRAVQDSPIVQVKCSFTCKNQENCSLPEWALCGERERRRQLLKSSTFCLILPPGDPRVISEMFFQ 437 (907)
T ss_pred chhhhhHHHhccCCcccccccCceEEEEEeeccccCCCCCcchhhhccchHHHHHHhccceeEEEecCCCcchhhHHHHH
Confidence 23333333333221 2345556421 1 234455688999999999996 8888632 35
Q ss_pred hHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHccCCHHHHHHHHHHHhhhcceeeee
Q 007197 459 SAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRVIYA 538 (613)
Q Consensus 459 RlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~sIp~e~i~~Mr~~l~~v~~~f~Y~ 538 (613)
|+++|+..||||||+++. .+.||..-+||++.++++|...+.+ ++-+|+++...++.+||++++-+|.+++-.
T Consensus 438 r~~eaL~~GavPviLg~~---~~LPyqd~idWrraal~lPkaR~tE----~HFllrs~~dsDll~mRRqGRl~wEtYls~ 510 (907)
T KOG2264|consen 438 RFLEALQLGAVPVILGNS---QLLPYQDLIDWRRAALRLPKARLTE----AHFLLRSFEDSDLLEMRRQGRLFWETYLSD 510 (907)
T ss_pred HHHHHHhcCCeeEEeccc---cccchHHHHHHHHHhhhCCccccch----HHHHHHhcchhhHHHHHhhhhhhHHHHhhH
Confidence 799999999999999976 4556655599999999999999997 999999999999999999999999885542
Q ss_pred CCCCCcCCcCCHHHHHHHHHHHHHH
Q 007197 539 DPRSKLATLKDSFDVAVQSIIDRVT 563 (613)
Q Consensus 539 ~p~~~~~~~~DAFd~~l~~L~~Rv~ 563 (613)
. .--+++++.+|..|+.
T Consensus 511 ~--------~~~~~tvlA~lR~rlq 527 (907)
T KOG2264|consen 511 R--------HLLARTVLAALRYRLQ 527 (907)
T ss_pred H--------HHHHHHHHHHHHHhhC
Confidence 2 3468888888888874
No 4
>KOG1022 consensus Acetylglucosaminyltransferase EXT2/exostosin 2 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=99.20 E-value=6.9e-11 Score=128.82 Aligned_cols=236 Identities=17% Similarity=0.063 Sum_probs=155.9
Q ss_pred HhhhcCccccCCcCCceEEEEccccccchhhcccCCCcchhhHHHHHHH-HHHhcCccccccCCcCeEEEccccccccCC
Q 007197 245 NRMKQYECLTNDSSIAAAIFVPFYAGFDIARYLWGYNISMRDAASLDLV-NWLTKRPEWGIMGGKDHFLVAGRITWDFRR 323 (613)
Q Consensus 245 erLl~S~~rT~DPeeAdlFyVP~y~~l~~~r~~~~~n~s~rd~l~~~lv-~~L~~~PyWnRsgGrDHf~V~~~~~WDfrr 323 (613)
+....|.+.|.|+++||+| +|-..-++.+.. .-++. ..|.+.-.|+| |.+|..+..-+.-|
T Consensus 130 eA~~~S~yyt~n~N~aclf-~Ps~d~lnQn~l------------~~kl~~~ala~l~~wdr--g~nH~~fnmLpGg~--- 191 (691)
T KOG1022|consen 130 EAWHLSFYYTFNYNGACLF-MPSSDELNQNPL------------SWKLEKVALAKLLVWDR--GVNHEGFNMLPGGD--- 191 (691)
T ss_pred HHHHhccceecCCCceEEE-ecchhhhccCcc------------hHHHHHHHHhcccchhc--ccceeeEeeccCCC---
Confidence 3455789999999999997 785554433211 11111 23567789995 99999997643211
Q ss_pred CCCCCCccccccccccccccceEEEe-ecCCCCCCCCCCCCCCccCCCCCcccchhhhh------ccccCCCeeEEeccC
Q 007197 324 GSDEESDWGSKLLFLPATKNMSMLVV-ESSPWGANDFAIPYPTYFHPSKDAEVFDWQNR------MRKLERKWLFSFAGA 396 (613)
Q Consensus 324 ~~d~~~dwG~~l~~lp~~~N~til~v-e~~~w~~~d~~iPypt~fhP~kD~~vp~w~~~------~~~~~R~~L~~FaG~ 396 (613)
++ ++..+..+. .+ +++.- .++.|. ||+.-|+.+|.|... ....+|.+++--.|
T Consensus 192 -----p~-yntaldv~~-d~-a~~~gggf~tW~-----------yr~g~dv~ipv~Sp~~v~~~~~~~g~r~~~l~~~q- 251 (691)
T KOG1022|consen 192 -----PT-YNTALDVGQ-DE-AWYSGGGFGTWK-----------YRKGNDVYIPVRSPGNVGRAFLYDGSRYRVLQDCQ- 251 (691)
T ss_pred -----CC-ccccccCCc-ce-eEEecCCcCccc-----------ccCCCccccccccccccCccccCCccceeeeeccc-
Confidence 11 122222221 12 22221 223443 677778888887653 12445555444433
Q ss_pred CCCCCChhhHHHHHHHhhcCCCc--eeeeecC----CCCcC--CCchhHHhhcccCeEEEccCCCCCCcchHHHHHhhCc
Q 007197 397 PRPGDPLSIRGQLMEQCRNSEVG--KLLECDF----GESKC--HSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGC 468 (613)
Q Consensus 397 ~~~~~~~~IR~~L~~~~~~~~~~--~~v~c~~----g~~~c--~~~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGC 468 (613)
-++...+|..|++....++.- .+-.|.. ....| |..-.|...+...+||+.-+|-+-+..-+.+-+.+||
T Consensus 252 --~n~~pr~r~~l~el~~kh~e~~l~l~~c~nlsl~~r~~~qhH~~~~yp~~l~~~~fc~~~R~~r~gq~~lv~~~~a~c 329 (691)
T KOG1022|consen 252 --ENYGPRIRVSLIELLSKHEERELELPFCLNLSLNSRGVRQHHFDVKYPSSLEFIGFCDGDRVTRGGQFHLVILGYASC 329 (691)
T ss_pred --cccchHhHHhHHHHHhhccceEEecchhccccccccchhhcccccccccccceeeeEeccccccCCccceehhhhccc
Confidence 234556888887776554311 1111110 01233 2345899999999999999999999999999999999
Q ss_pred eeEEecCCCccccccccCC----CCCcceEEEeecchhccccccHHHHHccCCHHHHHHHHHHHhhh
Q 007197 469 IPVFFHPGSAYTQYTWHLP----KNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINL 531 (613)
Q Consensus 469 IPVIisD~say~qyp~~LP----lDw~~fSV~I~e~dv~~~~~~L~~iL~sIp~e~i~~Mr~~l~~v 531 (613)
||||..|. |.|| +||...||.++|..+.+ +.++|++|+...+.+||.+....
T Consensus 330 ~pvi~vd~-------y~lpf~~Vvdw~~aSv~~~e~~~~~----v~~~l~~i~~~~i~sl~~r~~~~ 385 (691)
T KOG1022|consen 330 APVISVDI-------YLLPFLGVVDWIVASVWCMEYYAGK----VMDALLNIETAGICSLQLRRIGS 385 (691)
T ss_pred ceeeeeeh-------hhhhhhhhhhceeeeEEeehhhHHH----HHHHhhcchhcchhhhhhhhhhh
Confidence 99999997 5666 89999999999999986 99999999999999998876543
No 5
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.66 E-value=0.075 Score=54.28 Aligned_cols=95 Identities=11% Similarity=0.145 Sum_probs=63.1
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHc
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLK 514 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~ 514 (613)
.++.+.|..|.+|+.|.+.......++|||.+|| |||.++.... -++ +.=....+.++..+..+-.-.|.+++.
T Consensus 258 ~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~-PvI~~~~~~~----~~~-i~~~~~g~~~~~~~~~~l~~~i~~l~~ 331 (364)
T cd03814 258 EELAAAYASADVFVFPSRTETFGLVVLEAMASGL-PVVAPDAGGP----ADI-VTDGENGLLVEPGDAEAFAAALAALLA 331 (364)
T ss_pred HHHHHHHHhCCEEEECcccccCCcHHHHHHHcCC-CEEEcCCCCc----hhh-hcCCcceEEcCCCCHHHHHHHHHHHHc
Confidence 4678899999999999877666677999999999 8888886321 112 222345556666555320002434433
Q ss_pred cCCHHHHHHHHHHHhhhcceeee
Q 007197 515 QISPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 515 sIp~e~i~~Mr~~l~~v~~~f~Y 537 (613)
.++.+.+|.++..+....+.|
T Consensus 332 --~~~~~~~~~~~~~~~~~~~~~ 352 (364)
T cd03814 332 --DPELRRRMAARARAEAERRSW 352 (364)
T ss_pred --CHHHHHHHHHHHHHHHhhcCH
Confidence 578888999888876655544
No 6
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=94.79 E-value=0.054 Score=54.23 Aligned_cols=94 Identities=12% Similarity=0.110 Sum_probs=61.5
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHc
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLK 514 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~ 514 (613)
.+..+.|+++.+++.|....-....++|||.+||. ||.++.... +-++ ++-....+.++..|+.+ +.+.|.
T Consensus 244 ~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~a~G~P-vi~~~~~~~---~~~~-~~~~~~g~~~~~~~~~~----~~~~i~ 314 (348)
T cd03820 244 KNIEEYYAKASIFVLTSRFEGFPMVLLEAMAFGLP-VISFDCPTG---PSEI-IEDGVNGLLVPNGDVEA----LAEALL 314 (348)
T ss_pred chHHHHHHhCCEEEeCccccccCHHHHHHHHcCCC-EEEecCCCc---hHhh-hccCcceEEeCCCCHHH----HHHHHH
Confidence 56888999999999997554445569999999995 556653111 1122 33334566677666543 444444
Q ss_pred cC--CHHHHHHHHHHHhhhcceeee
Q 007197 515 QI--SPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 515 sI--p~e~i~~Mr~~l~~v~~~f~Y 537 (613)
.+ .++...+|.++...+...|.|
T Consensus 315 ~ll~~~~~~~~~~~~~~~~~~~~~~ 339 (348)
T cd03820 315 RLMEDEELRKRMGANARESAERFSI 339 (348)
T ss_pred HHHcCHHHHHHHHHHHHHHHHHhCH
Confidence 43 578888898888777666555
No 7
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=94.17 E-value=0.23 Score=49.71 Aligned_cols=94 Identities=13% Similarity=0.190 Sum_probs=62.2
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHH
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERL 513 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL 513 (613)
..++.+.|..|.+.++|.-.......++|||.+|| |||..+.... ..-+.-....+.++..+..+ +.+.|
T Consensus 266 ~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~-pvI~~~~~~~-----~~~~~~~~~g~~~~~~~~~~----l~~~i 335 (374)
T cd03801 266 DEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGL-PVVASDVGGI-----PEVVEDGETGLLVPPGDPEA----LAEAI 335 (374)
T ss_pred hhhHHHHHHhcCEEEecchhccccchHHHHHHcCC-cEEEeCCCCh-----hHHhcCCcceEEeCCCCHHH----HHHHH
Confidence 36789999999999999765555566999999998 6777774221 11133355666777765543 44554
Q ss_pred ccC--CHHHHHHHHHHHh-hhcceeee
Q 007197 514 KQI--SPEQIKEMRETVI-NLIPRVIY 537 (613)
Q Consensus 514 ~sI--p~e~i~~Mr~~l~-~v~~~f~Y 537 (613)
..+ .++...+|.++.. .+...+.|
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (374)
T cd03801 336 LRLLDDPELRRRLGEAARERVAERFSW 362 (374)
T ss_pred HHHHcChHHHHHHHHHHHHHHHHhcCH
Confidence 442 4667778888876 45555444
No 8
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=93.97 E-value=0.08 Score=53.87 Aligned_cols=94 Identities=16% Similarity=0.229 Sum_probs=61.6
Q ss_pred chhHHhhcccCeEEEccCCCCCC-----cchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhcccccc
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYT-----RRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVS 508 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~t-----srRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~ 508 (613)
..++.+.|..+.++++|...+.. ...++|||.+|| |||.++.... -+. +.-....+.++..++..
T Consensus 285 ~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~-pvi~~~~~~~----~~~-~~~~~~g~~~~~~~~~~---- 354 (394)
T cd03794 285 KEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGK-PVLASVDGES----AEL-VEEAGAGLVVPPGDPEA---- 354 (394)
T ss_pred hHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCC-cEEEecCCCc----hhh-hccCCcceEeCCCCHHH----
Confidence 35788899999999999765532 445899999997 8888876321 111 21124556666655543
Q ss_pred HHHHHccC--CHHHHHHHHHHHhhhcc-eeee
Q 007197 509 IEERLKQI--SPEQIKEMRETVINLIP-RVIY 537 (613)
Q Consensus 509 L~~iL~sI--p~e~i~~Mr~~l~~v~~-~f~Y 537 (613)
+.+.|..+ .+++..+|.++..+... +|.|
T Consensus 355 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~ 386 (394)
T cd03794 355 LAAAILELLDDPEERAEMGENGRRYVEEKFSR 386 (394)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHhhcH
Confidence 44444444 67888888888776554 5554
No 9
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=93.08 E-value=0.12 Score=53.06 Aligned_cols=92 Identities=14% Similarity=0.228 Sum_probs=61.7
Q ss_pred hhHHhhcccCeEEEccCCCC--CCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHH
Q 007197 435 SSIMQMFQTSIFCLQPQGDS--YTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEER 512 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs--~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~i 512 (613)
.++.+.|+.+.+++.|.... .....+.|||.+|| |||.+|... .+.-.+ ....+.++..|+.+ +.+.
T Consensus 259 ~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~-PvI~~~~~~-----~~~i~~-~~~g~~~~~~d~~~----~~~~ 327 (366)
T cd03822 259 EELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGK-PVISTPVGH-----AEEVLD-GGTGLLVPPGDPAA----LAEA 327 (366)
T ss_pred HHHHHHHhhcCEEEecccccccccchHHHHHHHcCC-CEEecCCCC-----hheeee-CCCcEEEcCCCHHH----HHHH
Confidence 46889999999999998766 55666999999999 999988531 111122 23345555555443 4444
Q ss_pred HccC--CHHHHHHHHHHHhhhcceeee
Q 007197 513 LKQI--SPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 513 L~sI--p~e~i~~Mr~~l~~v~~~f~Y 537 (613)
|..+ .++...+|+++..+....+.|
T Consensus 328 l~~l~~~~~~~~~~~~~~~~~~~~~s~ 354 (366)
T cd03822 328 IRRLLADPELAQALRARAREYARAMSW 354 (366)
T ss_pred HHHHHcChHHHHHHHHHHHHHHhhCCH
Confidence 4332 357888899988887766555
No 10
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=92.85 E-value=0.95 Score=47.84 Aligned_cols=91 Identities=11% Similarity=0.140 Sum_probs=58.0
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCC--CCCcceEEEeecchhccccccHHHH
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLP--KNYSSYSVFIPEDDIRKRNVSIEER 512 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LP--lDw~~fSV~I~e~dv~~~~~~L~~i 512 (613)
.+..+.|+.|.+++.|.-.......++|||.+|| |||.+|.. ..+ +.-......++..|..+ +.+.
T Consensus 264 ~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~-Pvv~s~~~-------g~~e~i~~~~~g~~~~~~d~~~----la~~ 331 (374)
T TIGR03088 264 DDVPALMQALDLFVLPSLAEGISNTILEAMASGL-PVIATAVG-------GNPELVQHGVTGALVPPGDAVA----LARA 331 (374)
T ss_pred CCHHHHHHhcCEEEeccccccCchHHHHHHHcCC-CEEEcCCC-------CcHHHhcCCCceEEeCCCCHHH----HHHH
Confidence 3577888999998888654444556999999996 99998852 222 33345566677666543 4444
Q ss_pred HccC--CHHHHHHHHHHHhhh-cceeee
Q 007197 513 LKQI--SPEQIKEMRETVINL-IPRVIY 537 (613)
Q Consensus 513 L~sI--p~e~i~~Mr~~l~~v-~~~f~Y 537 (613)
|..+ .++....|.++.++. ..+|.|
T Consensus 332 i~~l~~~~~~~~~~~~~a~~~~~~~fs~ 359 (374)
T TIGR03088 332 LQPYVSDPAARRAHGAAGRARAEQQFSI 359 (374)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 4332 456666776666553 345554
No 11
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=92.81 E-value=0.35 Score=53.66 Aligned_cols=95 Identities=12% Similarity=0.193 Sum_probs=65.9
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCC--CcceEEEeecchhccccccHHHH
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKN--YSSYSVFIPEDDIRKRNVSIEER 512 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlD--w~~fSV~I~e~dv~~~~~~L~~i 512 (613)
.++.+.|+.+..++.|.........++|||.+| +|||.++.... -++-.+ .....+.++..|... +.+.
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~G-~PVI~s~~gg~----~eiv~~~~~~~~G~lv~~~d~~~----la~~ 393 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMASG-VPVVAARAGGI----PDIIPPDQEGKTGFLYTPGDVDD----CVEK 393 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHcC-CCEEEcCCCCc----HhhhhcCCCCCceEEeCCCCHHH----HHHH
Confidence 578889999999999987665566799999999 89999875311 122123 256667777666653 4443
Q ss_pred HccC--CHHHHHHHHHHHhhhcceeeee
Q 007197 513 LKQI--SPEQIKEMRETVINLIPRVIYA 538 (613)
Q Consensus 513 L~sI--p~e~i~~Mr~~l~~v~~~f~Y~ 538 (613)
|..+ .++...+|.++.++....|.|.
T Consensus 394 i~~ll~~~~~~~~~~~~a~~~~~~fsw~ 421 (465)
T PLN02871 394 LETLLADPELRERMGAAAREEVEKWDWR 421 (465)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHhCCHH
Confidence 3332 4778888999888877666663
No 12
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=92.33 E-value=0.19 Score=47.10 Aligned_cols=86 Identities=13% Similarity=0.288 Sum_probs=52.4
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHH
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERL 513 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL 513 (613)
..++.++++.|.+.++|.........+.|||.+|| |||.++.... -+.-.+.. -.+.++..++.+ +.+.+
T Consensus 83 ~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~-pvI~~~~~~~----~e~~~~~~-~g~~~~~~~~~~----l~~~i 152 (172)
T PF00534_consen 83 DDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGC-PVIASDIGGN----NEIINDGV-NGFLFDPNDIEE----LADAI 152 (172)
T ss_dssp HHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT--EEEEESSTHH----HHHSGTTT-SEEEESTTSHHH----HHHHH
T ss_pred ccccccccccceecccccccccccccccccccccc-ceeeccccCC----ceeecccc-ceEEeCCCCHHH----HHHHH
Confidence 45789999999999999887777778999999999 6667764211 11112222 335555555553 44444
Q ss_pred ccCC--HHHHHHHHHHHh
Q 007197 514 KQIS--PEQIKEMRETVI 529 (613)
Q Consensus 514 ~sIp--~e~i~~Mr~~l~ 529 (613)
..+- ++....|.++.+
T Consensus 153 ~~~l~~~~~~~~l~~~~~ 170 (172)
T PF00534_consen 153 EKLLNDPELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCHHHHHHHHHHhc
Confidence 4432 355666666654
No 13
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=92.13 E-value=0.75 Score=46.65 Aligned_cols=91 Identities=14% Similarity=0.214 Sum_probs=56.5
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecch--hccccccHHHH
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDD--IRKRNVSIEER 512 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~d--v~~~~~~L~~i 512 (613)
.+....|..+.+++.|.-.......++|||.+|| |||.++..... ++-.+ ...+.++.++ +.+ .|..+
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~---~i~~l 342 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGT-PVVTTDKVPWQ----ELIEY--GCGWVVDDDVDALAA---ALRRA 342 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCC-CEEEcCCCCHH----HHhhc--CceEEeCCChHHHHH---HHHHH
Confidence 4678889999999999765444556999999997 88888763221 11123 3444444432 222 13333
Q ss_pred HccCCHHHHHHHHHHHhhh-cceeee
Q 007197 513 LKQISPEQIKEMRETVINL-IPRVIY 537 (613)
Q Consensus 513 L~sIp~e~i~~Mr~~l~~v-~~~f~Y 537 (613)
+. .++..++|.++.++. ..+|.|
T Consensus 343 ~~--~~~~~~~~~~~~~~~~~~~~s~ 366 (375)
T cd03821 343 LE--LPQRLKAMGENGRALVEERFSW 366 (375)
T ss_pred Hh--CHHHHHHHHHHHHHHHHHhcCH
Confidence 33 247788888887765 555554
No 14
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=91.98 E-value=0.28 Score=49.36 Aligned_cols=92 Identities=11% Similarity=0.164 Sum_probs=57.9
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHc
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLK 514 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~ 514 (613)
.+..+.|+.|.+|+.|....-....++|||.+|| |||.++..... ++ +.=....+.++.++... +.+.+.
T Consensus 255 ~~~~~~~~~adi~i~ps~~e~~~~~~~Ea~~~G~-Pvi~s~~~~~~----~~-i~~~~~g~~~~~~~~~~----~~~~i~ 324 (359)
T cd03808 255 DDVPELLAAADVFVLPSYREGLPRVLLEAMAMGR-PVIATDVPGCR----EA-VIDGVNGFLVPPGDAEA----LADAIE 324 (359)
T ss_pred ccHHHHHHhccEEEecCcccCcchHHHHHHHcCC-CEEEecCCCch----hh-hhcCcceEEECCCCHHH----HHHHHH
Confidence 4678899999999999766555666999999996 78888753211 11 22134456666655543 333333
Q ss_pred cC--CHHHHHHHHHHHhhh-cceee
Q 007197 515 QI--SPEQIKEMRETVINL-IPRVI 536 (613)
Q Consensus 515 sI--p~e~i~~Mr~~l~~v-~~~f~ 536 (613)
.+ .++...+|.++..+. ..+|.
T Consensus 325 ~l~~~~~~~~~~~~~~~~~~~~~~s 349 (359)
T cd03808 325 RLIEDPELRARMGQAARKRAEEEFD 349 (359)
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhcC
Confidence 32 467777777776554 44433
No 15
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=91.88 E-value=1.2 Score=45.27 Aligned_cols=88 Identities=13% Similarity=0.231 Sum_probs=55.9
Q ss_pred hhHHhhcccCeEEEccC--CCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHH
Q 007197 435 SSIMQMFQTSIFCLQPQ--GDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEER 512 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~--GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~i 512 (613)
.+..+.|+.+.++++|. +.+.+ ..++|||.+| +|||.++... ...-++.....+.++..|+..-.-.|.++
T Consensus 254 ~~~~~~~~~ad~~i~ps~~~e~~~-~~~~Ea~a~G-~Pvi~~~~~~-----~~e~i~~~~~g~~~~~~d~~~l~~~i~~l 326 (359)
T cd03823 254 EEIDDFYAEIDVLVVPSIWPENFP-LVIREALAAG-VPVIASDIGG-----MAELVRDGVNGLLFPPGDAEDLAAALERL 326 (359)
T ss_pred HHHHHHHHhCCEEEEcCcccCCCC-hHHHHHHHCC-CCEEECCCCC-----HHHHhcCCCcEEEECCCCHHHHHHHHHHH
Confidence 57888999999999996 34444 4599999999 6788877532 11114444456677776654300023333
Q ss_pred HccCCHHHHHHHHHHHhhh
Q 007197 513 LKQISPEQIKEMRETVINL 531 (613)
Q Consensus 513 L~sIp~e~i~~Mr~~l~~v 531 (613)
|. .++...+|+++.++.
T Consensus 327 ~~--~~~~~~~~~~~~~~~ 343 (359)
T cd03823 327 ID--DPDLLERLRAGIEPP 343 (359)
T ss_pred Hh--ChHHHHHHHHhHHHh
Confidence 33 577788888776553
No 16
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=91.50 E-value=1 Score=48.44 Aligned_cols=135 Identities=11% Similarity=0.056 Sum_probs=75.3
Q ss_pred CeeEEeccCCCCCC------ChhhHHHHHHHhhc---CCCceeeeecCCCCcCCCchhHHhhcccCeEEEccCCCCCCcc
Q 007197 388 KWLFSFAGAPRPGD------PLSIRGQLMEQCRN---SEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRR 458 (613)
Q Consensus 388 ~~L~~FaG~~~~~~------~~~IR~~L~~~~~~---~~~~~~v~c~~g~~~c~~~~~y~~~m~~SkFCL~P~GDs~tsr 458 (613)
.+-+.+.|...+.+ ....++.+++.... .+...++ |. ....++.+.|+.|..++.|.-......
T Consensus 243 ~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~----G~---v~~~~~~~~l~~adv~v~~s~~e~~~~ 315 (396)
T cd03818 243 DARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFL----GR---VPYDQYLALLQVSDVHVYLTYPFVLSW 315 (396)
T ss_pred CcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEe----CC---CCHHHHHHHHHhCcEEEEcCcccccch
Confidence 56677888533211 12246666666543 2222221 21 123467888999998888764443344
Q ss_pred hHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHccCCHHHHHHHHHHHhhhc-ceeee
Q 007197 459 SAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLI-PRVIY 537 (613)
Q Consensus 459 RlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~sIp~e~i~~Mr~~l~~v~-~~f~Y 537 (613)
.++|||.+|| |||.++... ...-+.-..-.+.++..|...-.-.|..+|. .++...+|.++.++.. .+|.|
T Consensus 316 ~llEAmA~G~-PVIas~~~g-----~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~--~~~~~~~l~~~ar~~~~~~fs~ 387 (396)
T cd03818 316 SLLEAMACGC-LVVGSDTAP-----VREVITDGENGLLVDFFDPDALAAAVIELLD--DPARRARLRRAARRTALRYDLL 387 (396)
T ss_pred HHHHHHHCCC-CEEEcCCCC-----chhhcccCCceEEcCCCCHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHhccH
Confidence 6999999999 888887521 1111333344566665554430002444444 3677788888876644 33544
No 17
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=91.08 E-value=0.31 Score=49.90 Aligned_cols=93 Identities=12% Similarity=0.207 Sum_probs=60.8
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHH
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERL 513 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL 513 (613)
..++.+.|+.+.+++.|.-..-....++|||.+|| |||.++..+.. ++ + .+..+.++..+..+ +.+.|
T Consensus 263 ~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~-pvI~~~~~~~~----e~-~--~~~~~~~~~~~~~~----~~~~i 330 (365)
T cd03809 263 DEELAALYRGARAFVFPSLYEGFGLPVLEAMACGT-PVIASNISSLP----EV-A--GDAALYFDPLDPEA----LAAAI 330 (365)
T ss_pred hhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCC-cEEecCCCCcc----ce-e--cCceeeeCCCCHHH----HHHHH
Confidence 34678899999999998643333445999999997 78887753221 11 2 23455666655543 44444
Q ss_pred cc-C-CHHHHHHHHHHHhhhcceeeee
Q 007197 514 KQ-I-SPEQIKEMRETVINLIPRVIYA 538 (613)
Q Consensus 514 ~s-I-p~e~i~~Mr~~l~~v~~~f~Y~ 538 (613)
.. + .++...+|.++.+.+...+.|.
T Consensus 331 ~~l~~~~~~~~~~~~~~~~~~~~~sw~ 357 (365)
T cd03809 331 ERLLEDPALREELRERGLARAKRFSWE 357 (365)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHhCCHH
Confidence 44 2 4777888888887777776663
No 18
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=90.91 E-value=0.83 Score=48.95 Aligned_cols=98 Identities=11% Similarity=0.168 Sum_probs=61.2
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHH
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERL 513 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL 513 (613)
..+..+.|+.+..|+.|.=.......++|||.+|| |||.++... ...-+.=....+.++..|+..-.-.|.++|
T Consensus 293 ~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~-Pvi~~~~~~-----~~e~i~~~~~g~~~~~~d~~~la~~i~~~l 366 (405)
T TIGR03449 293 PEELVHVYRAADVVAVPSYNESFGLVAMEAQACGT-PVVAARVGG-----LPVAVADGETGLLVDGHDPADWADALARLL 366 (405)
T ss_pred HHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCC-CEEEecCCC-----cHhhhccCCceEECCCCCHHHHHHHHHHHH
Confidence 35678899999998888533333445999999997 888887521 111132234456676666543000233444
Q ss_pred ccCCHHHHHHHHHHHhhhcceeeeeC
Q 007197 514 KQISPEQIKEMRETVINLIPRVIYAD 539 (613)
Q Consensus 514 ~sIp~e~i~~Mr~~l~~v~~~f~Y~~ 539 (613)
. .++...+|.++..+....|.|..
T Consensus 367 ~--~~~~~~~~~~~~~~~~~~fsw~~ 390 (405)
T TIGR03449 367 D--DPRTRIRMGAAAVEHAAGFSWAA 390 (405)
T ss_pred h--CHHHHHHHHHHHHHHHHhCCHHH
Confidence 3 46777889888887766666633
No 19
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=90.87 E-value=1.8 Score=47.60 Aligned_cols=134 Identities=14% Similarity=0.112 Sum_probs=73.1
Q ss_pred CeeEEeccCCCCCCChhhHHHHHHHhhcC---CCceeeeecCCCCcCCCchhHHhhcccCeEEEccCCCCCCcchHHHHH
Q 007197 388 KWLFSFAGAPRPGDPLSIRGQLMEQCRNS---EVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSI 464 (613)
Q Consensus 388 ~~L~~FaG~~~~~~~~~IR~~L~~~~~~~---~~~~~v~c~~g~~~c~~~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI 464 (613)
++-+.+.|..+..+....++.|.++.++. +...++ | . ....++.+.|+.|..++.|.=+..-...++|||
T Consensus 273 ~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~----g--~-v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAM 345 (419)
T cd03806 273 KIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFV----V--N-APFEELLEELSTASIGLHTMWNEHFGIGVVEYM 345 (419)
T ss_pred ceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEe----c--C-CCHHHHHHHHHhCeEEEECCccCCcccHHHHHH
Confidence 57788888754333333444454444332 222222 1 1 124578899999999998864444445699999
Q ss_pred hhCceeEEecCCCccccccccCCCC---CcceEEEe-ecchhccccccHHHHHccCCHHHHHHHHHHHhhhcceeee
Q 007197 465 LAGCIPVFFHPGSAYTQYTWHLPKN---YSSYSVFI-PEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 465 ~aGCIPVIisD~say~qyp~~LPlD---w~~fSV~I-~e~dv~~~~~~L~~iL~sIp~e~i~~Mr~~l~~v~~~f~Y 537 (613)
.+||+||. ++... |.+.-+. -..-.+.+ +.+++.+ .|.++|.. +++....|+++-+++..+|.+
T Consensus 346 a~G~pvIa-~~~gg----p~~~iv~~~~~g~~G~l~~d~~~la~---ai~~ll~~-~~~~~~~~~~~~~~~~~~fs~ 413 (419)
T cd03806 346 AAGLIPLA-HASGG----PLLDIVVPWDGGPTGFLASTAEEYAE---AIEKILSL-SEEERLRIRRAARSSVKRFSD 413 (419)
T ss_pred HcCCcEEE-EcCCC----CchheeeccCCCCceEEeCCHHHHHH---HHHHHHhC-CHHHHHHHHHHHHHHHHhhCH
Confidence 99996664 44210 1221121 11222222 3334433 24444443 566666677777777777655
No 20
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=90.80 E-value=0.29 Score=51.92 Aligned_cols=90 Identities=19% Similarity=0.246 Sum_probs=61.3
Q ss_pred chhHHhhcccCeEEEccCCCC-----------CCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchh
Q 007197 434 PSSIMQMFQTSIFCLQPQGDS-----------YTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDI 502 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs-----------~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv 502 (613)
+.+..+.|+. -|+|++.+++ ...-.++++|.+|+ |||.++..+.. ++ +.=....+.++ ++
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~-PVI~~~~~~~~----~~-V~~~~~G~~v~--~~ 287 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGL-PVIVWSKAAIA----DF-IVENGLGFVVD--SL 287 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCC-CEEECCCccHH----HH-HHhCCceEEeC--CH
Confidence 3455666665 8899887761 11223888888886 99998874321 11 33344555555 34
Q ss_pred ccccccHHHHHccCCHHHHHHHHHHHhhhcceee
Q 007197 503 RKRNVSIEERLKQISPEQIKEMRETVINLIPRVI 536 (613)
Q Consensus 503 ~~~~~~L~~iL~sIp~e~i~~Mr~~l~~v~~~f~ 536 (613)
.+ +.+.|..++++++.+|+++++++.+.+.
T Consensus 288 ~e----l~~~l~~~~~~~~~~m~~n~~~~~~~~~ 317 (333)
T PRK09814 288 EE----LPEIIDNITEEEYQEMVENVKKISKLLR 317 (333)
T ss_pred HH----HHHHHHhcCHHHHHHHHHHHHHHHHHHh
Confidence 33 7888989999999999999999887654
No 21
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=90.39 E-value=0.51 Score=47.67 Aligned_cols=93 Identities=13% Similarity=0.103 Sum_probs=56.6
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHc
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLK 514 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~ 514 (613)
.+..+.|+.+.++++|....-....++|||.+|| |||.++.... -++-.+ ..+.++.++..+-.-.|.++|.
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~-PvI~~~~~~~----~e~~~~---~g~~~~~~~~~~l~~~i~~l~~ 331 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGL-PVVATDVGDN----AELVGD---TGFLVPPGDPEALAEAIEALLA 331 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCC-CEEEcCCCCh----HHHhhc---CCEEeCCCCHHHHHHHHHHHHh
Confidence 3577899999999999876555666999999996 8888875322 111123 4455655554320002333333
Q ss_pred cCCHHHHHHHHHHHhhh-cceeee
Q 007197 515 QISPEQIKEMRETVINL-IPRVIY 537 (613)
Q Consensus 515 sIp~e~i~~Mr~~l~~v-~~~f~Y 537 (613)
.+++..+|.++..+. ...|.|
T Consensus 332 --~~~~~~~~~~~~~~~~~~~~s~ 353 (365)
T cd03807 332 --DPALRQALGEAARERIEENFSI 353 (365)
T ss_pred --ChHHHHHHHHHHHHHHHHhCCH
Confidence 346777777776553 344544
No 22
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=90.04 E-value=0.53 Score=49.17 Aligned_cols=92 Identities=13% Similarity=0.182 Sum_probs=58.2
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHcc
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQ 515 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~s 515 (613)
+..+.|+.+..++.|.-.......+.|||.+| +|||.++.... -++ +.-..-...++..|+.+ +.+.+..
T Consensus 263 ~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g-~PvI~s~~~~~----~e~-i~~~~~G~~~~~~~~~~----l~~~i~~ 332 (371)
T cd04962 263 HVEELLSIADLFLLPSEKESFGLAALEAMACG-VPVVASNAGGI----PEV-VKHGETGFLVDVGDVEA----MAEYALS 332 (371)
T ss_pred cHHHHHHhcCEEEeCCCcCCCccHHHHHHHcC-CCEEEeCCCCc----hhh-hcCCCceEEcCCCCHHH----HHHHHHH
Confidence 57788999999999974444455699999999 68888875311 122 22223344556555543 3333322
Q ss_pred C--CHHHHHHHHHHHhhh-cceeee
Q 007197 516 I--SPEQIKEMRETVINL-IPRVIY 537 (613)
Q Consensus 516 I--p~e~i~~Mr~~l~~v-~~~f~Y 537 (613)
+ .++.+.+|+++.... ..+|.|
T Consensus 333 l~~~~~~~~~~~~~~~~~~~~~fs~ 357 (371)
T cd04962 333 LLEDDELWQEFSRAARNRAAERFDS 357 (371)
T ss_pred HHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 2 577888999888775 455444
No 23
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=89.71 E-value=0.68 Score=47.83 Aligned_cols=93 Identities=14% Similarity=0.214 Sum_probs=59.8
Q ss_pred chhHHhhcccCeEEEccC--CCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHH
Q 007197 434 PSSIMQMFQTSIFCLQPQ--GDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEE 511 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~--GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~ 511 (613)
..++.+.|+.|..++.|. ..+.+ ..++|||.+|| |||..+.... ..-+.-....+.++.+|+.. +.+
T Consensus 254 ~~~~~~~l~~ad~~i~ps~~~e~~~-~~l~EA~a~G~-PvI~~~~~~~-----~e~i~~~~~g~~~~~~~~~~----l~~ 322 (355)
T cd03819 254 CSDMPAAYALADIVVSASTEPEAFG-RTAVEAQAMGR-PVIASDHGGA-----RETVRPGETGLLVPPGDAEA----LAQ 322 (355)
T ss_pred cccHHHHHHhCCEEEecCCCCCCCc-hHHHHHHhcCC-CEEEcCCCCc-----HHHHhCCCceEEeCCCCHHH----HHH
Confidence 346788999999999986 33333 45999999999 8888775321 11133333556666666654 555
Q ss_pred HHc---cCCHHHHHHHHHHHhhhc-ceeee
Q 007197 512 RLK---QISPEQIKEMRETVINLI-PRVIY 537 (613)
Q Consensus 512 iL~---sIp~e~i~~Mr~~l~~v~-~~f~Y 537 (613)
.|. ...+++..+|.++.++.. .+|.|
T Consensus 323 ~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~ 352 (355)
T cd03819 323 ALDQILSLLPEGRAKMFAKARMCVETLFSY 352 (355)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHhhhh
Confidence 442 236788888888876644 44433
No 24
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=89.66 E-value=0.51 Score=49.56 Aligned_cols=95 Identities=9% Similarity=0.147 Sum_probs=60.1
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHc
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLK 514 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~ 514 (613)
.++.+.++.|..+++|.-.......++|||.+|+ |||.++.... -++ +.-....+.++..+...-.-.|.++|.
T Consensus 294 ~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~-Pvi~s~~~~~----~e~-i~~~~~g~~~~~~~~~~l~~~i~~l~~ 367 (398)
T cd03800 294 EDLPALYRAADVFVNPALYEPFGLTALEAMACGL-PVVATAVGGP----RDI-VVDGVTGLLVDPRDPEALAAALRRLLT 367 (398)
T ss_pred HHHHHHHHhCCEEEecccccccCcHHHHHHhcCC-CEEECCCCCH----HHH-ccCCCCeEEeCCCCHHHHHHHHHHHHh
Confidence 4678889999999999765555556999999995 9999875321 111 322345566665554430002334333
Q ss_pred cCCHHHHHHHHHHHhhhc-ceeee
Q 007197 515 QISPEQIKEMRETVINLI-PRVIY 537 (613)
Q Consensus 515 sIp~e~i~~Mr~~l~~v~-~~f~Y 537 (613)
.++.+.+|.++.++.. .+|.|
T Consensus 368 --~~~~~~~~~~~a~~~~~~~~s~ 389 (398)
T cd03800 368 --DPALRRRLSRAGLRRARARYTW 389 (398)
T ss_pred --CHHHHHHHHHHHHHHHHHhCCH
Confidence 4778888888876654 66655
No 25
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=89.35 E-value=0.84 Score=49.43 Aligned_cols=78 Identities=17% Similarity=0.315 Sum_probs=45.8
Q ss_pred CeeEEeccCCCCCCChhhHHHHHHHhhcCCCceeeeecCCCCcC-----CCchhHHhhcccCeEEEccC---CCCCCcch
Q 007197 388 KWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKC-----HSPSSIMQMFQTSIFCLQPQ---GDSYTRRS 459 (613)
Q Consensus 388 ~~L~~FaG~~~~~~~~~IR~~L~~~~~~~~~~~~v~c~~g~~~c-----~~~~~y~~~m~~SkFCL~P~---GDs~tsrR 459 (613)
+..++++.+.. ....|..+++.+...-. +++ .++| .......+.+++-+|.|+.- -..+-+--
T Consensus 176 ~~~~w~~Snc~---~~~~R~~~~~~L~~~~~---vd~---yG~c~~~~~~~~~~~~~~~~~ykF~lafENs~c~dYiTEK 246 (349)
T PF00852_consen 176 KLAAWIVSNCN---PHSGREEYVRELSKYIP---VDS---YGKCGNNNPCPRDCKLELLSKYKFYLAFENSNCPDYITEK 246 (349)
T ss_dssp EEEEE--S-S-----H-HHHHHHHHHHTTS----EEE----SSTT--SSS--S-HHHHHHTEEEEEEE-SS--TT---HH
T ss_pred ceEEEEeeCcC---CcccHHHHHHHHHhhcC---eEc---cCCCCCCCCcccccccccccCcEEEEEecCCCCCCCCCHH
Confidence 34445555433 23349999999887621 222 1233 12345889999999999863 33444555
Q ss_pred HHHHHhhCceeEEec
Q 007197 460 AFDSILAGCIPVFFH 474 (613)
Q Consensus 460 lfDAI~aGCIPVIis 474 (613)
+|+|+.+|||||+++
T Consensus 247 ~~~al~~g~VPI~~G 261 (349)
T PF00852_consen 247 FWNALLAGTVPIYWG 261 (349)
T ss_dssp HHHHHHTTSEEEEES
T ss_pred HHHHHHCCeEEEEEC
Confidence 999999999999999
No 26
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=88.86 E-value=0.84 Score=47.57 Aligned_cols=92 Identities=14% Similarity=0.219 Sum_probs=57.7
Q ss_pred hhHHhhcccCeEEEccCC-------CCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccc
Q 007197 435 SSIMQMFQTSIFCLQPQG-------DSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNV 507 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~G-------Ds~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~ 507 (613)
.+..+.|..|..++.|.- .+. ...++|||.+|| |||.+|.... -++ +.-....+.++..|+.+
T Consensus 256 ~~l~~~~~~ad~~v~ps~~~~~~~~E~~-~~~~~EA~a~G~-PvI~s~~~~~----~e~-i~~~~~g~~~~~~d~~~--- 325 (367)
T cd05844 256 AEVRELMRRARIFLQPSVTAPSGDAEGL-PVVLLEAQASGV-PVVATRHGGI----PEA-VEDGETGLLVPEGDVAA--- 325 (367)
T ss_pred HHHHHHHHhCCEEEECcccCCCCCccCC-chHHHHHHHcCC-CEEEeCCCCc----hhh-eecCCeeEEECCCCHHH---
Confidence 467788899998888753 223 344999999997 9999886321 111 33345566777666543
Q ss_pred cHHHHHccC--CHHHHHHHHHHHhhh-cceeee
Q 007197 508 SIEERLKQI--SPEQIKEMRETVINL-IPRVIY 537 (613)
Q Consensus 508 ~L~~iL~sI--p~e~i~~Mr~~l~~v-~~~f~Y 537 (613)
|.+.|..+ .++...+|.++..+. ..+|.|
T Consensus 326 -l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~ 357 (367)
T cd05844 326 -LAAALGRLLADPDLRARMGAAGRRRVEERFDL 357 (367)
T ss_pred -HHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCH
Confidence 44443332 466677888777653 355555
No 27
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=88.46 E-value=0.69 Score=46.58 Aligned_cols=64 Identities=9% Similarity=0.138 Sum_probs=42.9
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhc
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIR 503 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~ 503 (613)
..++.+.|.+|.++++|.......-.++|||.+|| |||.++..+.. ++ +.-....+.+...+..
T Consensus 269 ~~~~~~~~~~ad~~i~~~~~~~~~~~~~Ea~~~G~-pvI~~~~~~~~----~~-~~~~~~g~~~~~~~~~ 332 (377)
T cd03798 269 HEEVPAYYAAADVFVLPSLREGFGLVLLEAMACGL-PVVATDVGGIP----EI-ITDGENGLLVPPGDPE 332 (377)
T ss_pred HHHHHHHHHhcCeeecchhhccCChHHHHHHhcCC-CEEEecCCChH----HH-hcCCcceeEECCCCHH
Confidence 35678999999999999765555566999999999 67777753221 12 2223334566655554
No 28
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=88.42 E-value=2.2 Score=46.70 Aligned_cols=93 Identities=14% Similarity=0.225 Sum_probs=61.4
Q ss_pred chhHHhhcccCeEEEccCC-------CCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhcccc
Q 007197 434 PSSIMQMFQTSIFCLQPQG-------DSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRN 506 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~G-------Ds~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~ 506 (613)
..+..+.|+.+..++.|.= ++... .++|||.+|| |||.++.... -++ +.-..-.+.++..|...
T Consensus 289 ~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~-~llEAma~G~-PVI~t~~~g~----~E~-v~~~~~G~lv~~~d~~~-- 359 (406)
T PRK15427 289 SHEVKAMLDDADVFLLPSVTGADGDMEGIPV-ALMEAMAVGI-PVVSTLHSGI----PEL-VEADKSGWLVPENDAQA-- 359 (406)
T ss_pred HHHHHHHHHhCCEEEECCccCCCCCccCccH-HHHHHHhCCC-CEEEeCCCCc----hhh-hcCCCceEEeCCCCHHH--
Confidence 3467889999999999852 34433 4999999996 9999875311 122 33344566777777664
Q ss_pred ccHHHHHccC---CHHHHHHHHHHHhh-hcceeee
Q 007197 507 VSIEERLKQI---SPEQIKEMRETVIN-LIPRVIY 537 (613)
Q Consensus 507 ~~L~~iL~sI---p~e~i~~Mr~~l~~-v~~~f~Y 537 (613)
+.+.|..+ ++++..+|.++.++ +..+|.|
T Consensus 360 --la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~ 392 (406)
T PRK15427 360 --LAQRLAAFSQLDTDELAPVVKRAREKVETDFNQ 392 (406)
T ss_pred --HHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCH
Confidence 55555443 67778889888765 3455544
No 29
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=88.42 E-value=1.4 Score=46.46 Aligned_cols=94 Identities=11% Similarity=0.160 Sum_probs=58.0
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchh------ccccc
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDI------RKRNV 507 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv------~~~~~ 507 (613)
..+..+.|..|..++.|.-.......++|||.+|| |||.++.... -++ +.-....+.++..+. ..
T Consensus 271 ~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~-PvI~s~~~~~----~e~-i~~~~~G~~~~~~~~~~~~~~~~--- 341 (388)
T TIGR02149 271 KEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGT-PVVASATGGI----PEV-VVDGETGFLVPPDNSDADGFQAE--- 341 (388)
T ss_pred HHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCC-CEEEeCCCCH----HHH-hhCCCceEEcCCCCCcccchHHH---
Confidence 35678889999999998654444556899999999 8998875311 111 222233455554443 21
Q ss_pred cHHHHHccC--CHHHHHHHHHHHhhh-cceeee
Q 007197 508 SIEERLKQI--SPEQIKEMRETVINL-IPRVIY 537 (613)
Q Consensus 508 ~L~~iL~sI--p~e~i~~Mr~~l~~v-~~~f~Y 537 (613)
|.+.|..+ .+++..+|.++.++. ...|.|
T Consensus 342 -l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~ 373 (388)
T TIGR02149 342 -LAKAINILLADPELAKKMGIAGRKRAEEEFSW 373 (388)
T ss_pred -HHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH
Confidence 33333322 477778888887653 355555
No 30
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=88.38 E-value=1.2 Score=44.47 Aligned_cols=85 Identities=9% Similarity=0.090 Sum_probs=48.8
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHcc
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQ 515 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~s 515 (613)
+..+.|..+.++++|.-.......++|||.+|| |||.+|.... -++ +.=....+.++.++...-...+..++..
T Consensus 256 ~~~~~~~~~d~~i~ps~~e~~~~~~~Ea~~~G~-PvI~~~~~~~----~e~-i~~~~~g~~~~~~~~~~~~~~~~~i~~~ 329 (353)
T cd03811 256 NPYPYLKAADLFVLSSRYEGFPNVLLEAMALGT-PVVATDCPGP----REI-LEDGENGLLVPVGDEAALAAAALALLDL 329 (353)
T ss_pred CHHHHHHhCCEEEeCcccCCCCcHHHHHHHhCC-CEEEcCCCCh----HHH-hcCCCceEEECCCCHHHHHHHHHHHHhc
Confidence 466789999999999754444455999999999 5677665211 111 3333455566666654300001222222
Q ss_pred CC-HHHHHHHHH
Q 007197 516 IS-PEQIKEMRE 526 (613)
Q Consensus 516 Ip-~e~i~~Mr~ 526 (613)
.. ++...+|.+
T Consensus 330 ~~~~~~~~~~~~ 341 (353)
T cd03811 330 LLDPELRERLAA 341 (353)
T ss_pred cCChHHHHHHHH
Confidence 22 455666666
No 31
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=87.27 E-value=0.86 Score=48.06 Aligned_cols=94 Identities=16% Similarity=0.204 Sum_probs=58.6
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCC--CCCcceEEEeecchhccccccHHHH
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLP--KNYSSYSVFIPEDDIRKRNVSIEER 512 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LP--lDw~~fSV~I~e~dv~~~~~~L~~i 512 (613)
.+..+.|+++..++.|.-.......+.|||.+|| |||..+-. +..+ +.=.+..+.++..+..+-.-.|..+
T Consensus 270 ~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~-PvI~~~~~------~g~~~~v~~~~~G~lv~~~d~~~la~~i~~l 342 (372)
T cd04949 270 RDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGL-PVISYDVN------YGPSEIIEDGENGYLVPKGDIEALAEAIIEL 342 (372)
T ss_pred CCHHHHHhhhhEEEecccccccChHHHHHHhCCC-CEEEecCC------CCcHHHcccCCCceEeCCCcHHHHHHHHHHH
Confidence 3567789999999998744333445999999999 78877631 1111 2223455566655543300024444
Q ss_pred HccCCHHHHHHHHHHHhhhcceeee
Q 007197 513 LKQISPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 513 L~sIp~e~i~~Mr~~l~~v~~~f~Y 537 (613)
|. .++.+.+|+++..+....|.|
T Consensus 343 l~--~~~~~~~~~~~a~~~~~~~s~ 365 (372)
T cd04949 343 LN--DPKLLQKFSEAAYENAERYSE 365 (372)
T ss_pred Hc--CHHHHHHHHHHHHHHHHHhhH
Confidence 44 467888999888877666554
No 32
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=86.72 E-value=1.1 Score=46.29 Aligned_cols=93 Identities=12% Similarity=0.117 Sum_probs=52.8
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHcc
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQ 515 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~s 515 (613)
+..+.|..+.+.+.|....-....++|||.+|| |||.+|.... -++--+ ....++..|+..-.-.|.++|.
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~-PvI~~~~~~~----~e~i~~---~g~~~~~~~~~~~~~~i~~ll~- 325 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACEL-PVVATDAGGV----REVVGD---SGLIVPISDPEALANKIDEILK- 325 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCC-CEEEecCCCh----hhEecC---CceEeCCCCHHHHHHHHHHHHh-
Confidence 567788999998988765544556999999999 8888875321 111123 2334444554420001333332
Q ss_pred CCHHHHHHHHHHHhhhcceeee
Q 007197 516 ISPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 516 Ip~e~i~~Mr~~l~~v~~~f~Y 537 (613)
.+++....|.++-..+...|.|
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~s~ 347 (360)
T cd04951 326 MSGEERDIIGARRERIVKKFSI 347 (360)
T ss_pred CCHHHHHHHHHHHHHHHHhcCH
Confidence 2455556666553334445444
No 33
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=85.36 E-value=8.8 Score=40.78 Aligned_cols=93 Identities=13% Similarity=0.090 Sum_probs=57.1
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeec-chhccccccHHHH
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPE-DDIRKRNVSIEER 512 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e-~dv~~~~~~L~~i 512 (613)
.......++.+..++.|.........+.|||.+| +|||.++.... -++ +.-....+.++. +++.. .|..+
T Consensus 264 ~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G-~Pvv~s~~~~~----~~~-i~~~~~g~~~~~~~~~a~---~i~~l 334 (372)
T cd03792 264 DLEVNALQRASTVVLQKSIREGFGLTVTEALWKG-KPVIAGPVGGI----PLQ-IEDGETGFLVDTVEEAAV---RILYL 334 (372)
T ss_pred HHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcC-CCEEEcCCCCc----hhh-cccCCceEEeCCcHHHHH---HHHHH
Confidence 3567788999999998875444445699999999 59999875311 111 222222233332 22221 25555
Q ss_pred HccCCHHHHHHHHHHHhhh-cceeee
Q 007197 513 LKQISPEQIKEMRETVINL-IPRVIY 537 (613)
Q Consensus 513 L~sIp~e~i~~Mr~~l~~v-~~~f~Y 537 (613)
|. .++...+|.++..+. ...|.|
T Consensus 335 l~--~~~~~~~~~~~a~~~~~~~~s~ 358 (372)
T cd03792 335 LR--DPELRRKMGANAREHVRENFLI 358 (372)
T ss_pred Hc--CHHHHHHHHHHHHHHHHHHcCH
Confidence 54 477788998888774 456655
No 34
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=84.73 E-value=1.6 Score=47.11 Aligned_cols=92 Identities=11% Similarity=0.202 Sum_probs=55.1
Q ss_pred hHHhhcccCeEEEccC--CCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHH
Q 007197 436 SIMQMFQTSIFCLQPQ--GDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERL 513 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~--GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL 513 (613)
+....|+.+..++.|. |.+.... ++|||.+|| |||.++... -.+... ....+.++ .+..+-.-.|.++|
T Consensus 290 ~~~~~~~~adv~v~Ps~~~eG~~~~-~lEAma~G~-PVV~t~~~~-----~~i~~~-~~~g~lv~-~~~~~la~ai~~ll 360 (397)
T TIGR03087 290 DVRPYLAHAAVAVAPLRIARGIQNK-VLEAMAMAK-PVVASPEAA-----EGIDAL-PGAELLVA-ADPADFAAAILALL 360 (397)
T ss_pred CHHHHHHhCCEEEecccccCCcccH-HHHHHHcCC-CEEecCccc-----cccccc-CCcceEeC-CCHHHHHHHHHHHH
Confidence 4677889999999885 5555444 999999998 999987411 111111 12344454 34332000244444
Q ss_pred ccCCHHHHHHHHHHHhhh-cceeeee
Q 007197 514 KQISPEQIKEMRETVINL-IPRVIYA 538 (613)
Q Consensus 514 ~sIp~e~i~~Mr~~l~~v-~~~f~Y~ 538 (613)
. .++...+|.++.++. ..+|.|.
T Consensus 361 ~--~~~~~~~~~~~ar~~v~~~fsw~ 384 (397)
T TIGR03087 361 A--NPAEREELGQAARRRVLQHYHWP 384 (397)
T ss_pred c--CHHHHHHHHHHHHHHHHHhCCHH
Confidence 3 467778888887764 4566663
No 35
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=82.61 E-value=2.8 Score=43.07 Aligned_cols=93 Identities=11% Similarity=0.155 Sum_probs=57.5
Q ss_pred hhHHhhcccCeEEEccC---CCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHH
Q 007197 435 SSIMQMFQTSIFCLQPQ---GDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEE 511 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~---GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~ 511 (613)
..+.+.++.+..|+.|. +.+.+. .+.|||.+|| |||.++.... -+.-.+.....+.++.+|... +.+
T Consensus 255 ~~~~~~~~~ad~~i~ps~~~~e~~g~-~~~Ea~~~g~-Pvi~~~~~~~----~~~i~~~~~~g~~~~~~d~~~----~~~ 324 (357)
T cd03795 255 EEKAALLAACDVFVFPSVERSEAFGI-VLLEAMAFGK-PVISTEIGTG----GSYVNLHGVTGLVVPPGDPAA----LAE 324 (357)
T ss_pred HHHHHHHHhCCEEEeCCcccccccch-HHHHHHHcCC-CEEecCCCCc----hhHHhhCCCceEEeCCCCHHH----HHH
Confidence 45788899999999885 334443 4999999975 7787775321 111122345666666665543 333
Q ss_pred HHccC--CHHHHHHHHHHHhhhc-ceeee
Q 007197 512 RLKQI--SPEQIKEMRETVINLI-PRVIY 537 (613)
Q Consensus 512 iL~sI--p~e~i~~Mr~~l~~v~-~~f~Y 537 (613)
.|..+ .+++..+|+++..+.. ++|.+
T Consensus 325 ~i~~l~~~~~~~~~~~~~~~~~~~~~~s~ 353 (357)
T cd03795 325 AIRRLLEDPELRERLGEAARERAEEEFTA 353 (357)
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHhcch
Confidence 33332 5778889998887754 44443
No 36
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=82.55 E-value=1.2 Score=46.77 Aligned_cols=62 Identities=10% Similarity=0.187 Sum_probs=40.6
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhc
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIR 503 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~ 503 (613)
.++.+.|+.+..++.|.-.+.+.. ++|||.+|| |||.++..... ++ +.=....+.++.++..
T Consensus 253 ~~~~~~~~~ad~~v~ps~e~~g~~-~~Eama~G~-Pvi~~~~~~~~----e~-i~~~~~G~~~~~~~~~ 314 (351)
T cd03804 253 EELRDLYARARAFLFPAEEDFGIV-PVEAMASGT-PVIAYGKGGAL----ET-VIDGVTGILFEEQTVE 314 (351)
T ss_pred HHHHHHHHhCCEEEECCcCCCCch-HHHHHHcCC-CEEEeCCCCCc----ce-eeCCCCEEEeCCCCHH
Confidence 457889999999998865445444 899999998 99988753211 11 2222345666655544
No 37
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=82.19 E-value=7.9 Score=44.06 Aligned_cols=92 Identities=12% Similarity=0.157 Sum_probs=52.0
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCC--CCCcceEEEeec-------ch-hccc
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLP--KNYSSYSVFIPE-------DD-IRKR 505 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LP--lDw~~fSV~I~e-------~d-v~~~ 505 (613)
+..+.++.+..++.|.=...-...+.|||.+|| |||.+|-. +-.+ +.=..-.+.|+. ++ +..-
T Consensus 385 ~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~-PVI~~dv~------~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~~l 457 (500)
T TIGR02918 385 NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGL-GMIGFDVN------YGNPTFIEDNKNGYLIPIDEEEDDEDQIITAL 457 (500)
T ss_pred CHHHHHHhCCEEEEcCccccccHHHHHHHHhCC-CEEEecCC------CCCHHHccCCCCEEEEeCCccccchhHHHHHH
Confidence 455667777777776533333445999999998 78887631 2222 322233334441 12 2210
Q ss_pred cccHHHHHccCCHHHHHHHHHHHhhhcceeee
Q 007197 506 NVSIEERLKQISPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 506 ~~~L~~iL~sIp~e~i~~Mr~~l~~v~~~f~Y 537 (613)
.-.|..+| .++...+|.++..+....|.|
T Consensus 458 a~~I~~ll---~~~~~~~~~~~a~~~a~~fs~ 486 (500)
T TIGR02918 458 AEKIVEYF---NSNDIDAFHEYSYQIAEGFLT 486 (500)
T ss_pred HHHHHHHh---ChHHHHHHHHHHHHHHHhcCH
Confidence 00144444 466788999998887777655
No 38
>PLN02949 transferase, transferring glycosyl groups
Probab=82.17 E-value=13 Score=41.84 Aligned_cols=93 Identities=12% Similarity=0.152 Sum_probs=52.3
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccc-cCCCCC----cceEEEeecchhccccccH
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTW-HLPKNY----SSYSVFIPEDDIRKRNVSI 509 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~-~LPlDw----~~fSV~I~e~dv~~~~~~L 509 (613)
.+..+.|+++.+++.|.-+..--..+.|||.+||+||.-..+- |. +.-.+. +-|.+. +.+++.+ .|
T Consensus 346 ~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gG-----p~~eIV~~~~~g~tG~l~~-~~~~la~---ai 416 (463)
T PLN02949 346 RDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAG-----PKMDIVLDEDGQQTGFLAT-TVEEYAD---AI 416 (463)
T ss_pred HHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCC-----CcceeeecCCCCcccccCC-CHHHHHH---HH
Confidence 4677889999998887643333334999999998776654321 11 111121 112111 1222222 24
Q ss_pred HHHHccCCHHHHHHHHHHHhhhcceeee
Q 007197 510 EERLKQISPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 510 ~~iL~sIp~e~i~~Mr~~l~~v~~~f~Y 537 (613)
..+|.. ++++..+|+++.++...+|.+
T Consensus 417 ~~ll~~-~~~~r~~m~~~ar~~~~~FS~ 443 (463)
T PLN02949 417 LEVLRM-RETERLEIAAAARKRANRFSE 443 (463)
T ss_pred HHHHhC-CHHHHHHHHHHHHHHHHHcCH
Confidence 444432 567778898888776666555
No 39
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=81.49 E-value=4.1 Score=44.47 Aligned_cols=94 Identities=14% Similarity=0.210 Sum_probs=52.7
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceE-EEeecchhccccccHHHHH
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYS-VFIPEDDIRKRNVSIEERL 513 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fS-V~I~e~dv~~~~~~L~~iL 513 (613)
.+..+++..+++-+.-+=+..---+++|+|++|-|||.=..+- -..+..++|.-=. =|..+++..- .-.|.+|+
T Consensus 348 ~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgG----P~lDIV~~~~G~~tGFla~t~~EY-aE~iLkIv 422 (465)
T KOG1387|consen 348 EKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGG----PLLDIVTPWDGETTGFLAPTDEEY-AEAILKIV 422 (465)
T ss_pred HHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCC----CceeeeeccCCccceeecCChHHH-HHHHHHHH
Confidence 3678889999998886655444455999999999997654331 0133335564221 2222222210 00233444
Q ss_pred ccCCHHHHHHHHHHHhhhcce
Q 007197 514 KQISPEQIKEMRETVINLIPR 534 (613)
Q Consensus 514 ~sIp~e~i~~Mr~~l~~v~~~ 534 (613)
.. ..++...||++-+.-.-+
T Consensus 423 ~~-~~~~r~~~r~~AR~s~~R 442 (465)
T KOG1387|consen 423 KL-NYDERNMMRRNARKSLAR 442 (465)
T ss_pred Hc-CHHHHHHHHHHHHHHHHH
Confidence 33 455577788777654433
No 40
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=81.05 E-value=3.7 Score=34.87 Aligned_cols=80 Identities=13% Similarity=0.176 Sum_probs=45.9
Q ss_pred EEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEe-ecchhccccccHHHHHccCCHHHHHHHH
Q 007197 447 CLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFI-PEDDIRKRNVSIEERLKQISPEQIKEMR 525 (613)
Q Consensus 447 CL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I-~e~dv~~~~~~L~~iL~sIp~e~i~~Mr 525 (613)
||-|.-.+-...|+||+|.+||+. |..+...+ ..-++..+-.+.+ +.+++.+ .|..+|+ .++++++|.
T Consensus 2 ~Ln~~~~~~~~~r~~E~~a~G~~v-i~~~~~~~-----~~~~~~~~~~~~~~~~~el~~---~i~~ll~--~~~~~~~ia 70 (92)
T PF13524_consen 2 NLNPSRSDGPNMRIFEAMACGTPV-ISDDSPGL-----REIFEDGEHIITYNDPEELAE---KIEYLLE--NPEERRRIA 70 (92)
T ss_pred EeeCCCCCCCchHHHHHHHCCCeE-EECChHHH-----HHHcCCCCeEEEECCHHHHHH---HHHHHHC--CHHHHHHHH
Confidence 344432233444699999999954 44443222 2225455444555 4566654 2444454 788999998
Q ss_pred HHHhhhcc-eeee
Q 007197 526 ETVINLIP-RVIY 537 (613)
Q Consensus 526 ~~l~~v~~-~f~Y 537 (613)
++..+... ++.|
T Consensus 71 ~~a~~~v~~~~t~ 83 (92)
T PF13524_consen 71 KNARERVLKRHTW 83 (92)
T ss_pred HHHHHHHHHhCCH
Confidence 88866443 5544
No 41
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=80.48 E-value=9.9 Score=41.67 Aligned_cols=123 Identities=11% Similarity=0.121 Sum_probs=69.1
Q ss_pred CeeEEeccCCCCCCChhhHHHHHHHhhcCC--CceeeeecCCCCcCCCchhHHhhcccCeEEEccC----CCCCCcchHH
Q 007197 388 KWLFSFAGAPRPGDPLSIRGQLMEQCRNSE--VGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQ----GDSYTRRSAF 461 (613)
Q Consensus 388 ~~L~~FaG~~~~~~~~~IR~~L~~~~~~~~--~~~~v~c~~g~~~c~~~~~y~~~m~~SkFCL~P~----GDs~tsrRlf 461 (613)
++.+.+.|. +..++.|.++.+..+ ...++. |. ....++.+.|+.|..++.|. |.+.. ..++
T Consensus 269 ~i~l~ivG~------G~~~~~l~~~~~~~~l~~~~~~~---g~---~~~~~~~~~l~~aDv~v~~~~~~~~~~~p-~~~~ 335 (415)
T cd03816 269 KLLCIITGK------GPLKEKYLERIKELKLKKVTIRT---PW---LSAEDYPKLLASADLGVSLHTSSSGLDLP-MKVV 335 (415)
T ss_pred CEEEEEEec------CccHHHHHHHHHHcCCCcEEEEc---Cc---CCHHHHHHHHHhCCEEEEccccccccCCc-HHHH
Confidence 477888884 234566666655432 122221 11 12457888899998887542 33443 3499
Q ss_pred HHHhhCceeEEecCCCccccccccCCCCCcceEEEee-cchhccccccHHHHHcc-CCHHHHHHHHHHHhhhc
Q 007197 462 DSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIP-EDDIRKRNVSIEERLKQ-ISPEQIKEMRETVINLI 532 (613)
Q Consensus 462 DAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~-e~dv~~~~~~L~~iL~s-Ip~e~i~~Mr~~l~~v~ 532 (613)
|||.+|+ |||.++...- -++-.| ..-.+.++ .+++.+ .|..+|.. .++++..+|.++.++..
T Consensus 336 Eama~G~-PVI~s~~~~~----~eiv~~-~~~G~lv~d~~~la~---~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 336 DMFGCGL-PVCALDFKCI----DELVKH-GENGLVFGDSEELAE---QLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred HHHHcCC-CEEEeCCCCH----HHHhcC-CCCEEEECCHHHHHH---HHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 9999999 9999875211 122123 22233332 223322 24444443 12788899988887755
No 42
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=80.22 E-value=3.6 Score=42.09 Aligned_cols=40 Identities=13% Similarity=0.216 Sum_probs=32.1
Q ss_pred hhHHhhcccCeEEEccCC--CCCCcchHHHHHhhCceeEEecCC
Q 007197 435 SSIMQMFQTSIFCLQPQG--DSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~G--Ds~tsrRlfDAI~aGCIPVIisD~ 476 (613)
.+..+.|+.+.+++.|.- .+.+ ..++|||.+|| |||.+|.
T Consensus 235 ~~~~~~~~~~d~~v~ps~~~E~~~-~~~lEAma~G~-PvI~~~~ 276 (335)
T cd03802 235 AEKAELLGNARALLFPILWEEPFG-LVMIEAMACGT-PVIAFRR 276 (335)
T ss_pred HHHHHHHHhCcEEEeCCcccCCcc-hHHHHHHhcCC-CEEEeCC
Confidence 356788999999999964 3444 45999999997 9999886
No 43
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=79.67 E-value=3.4 Score=44.70 Aligned_cols=97 Identities=10% Similarity=0.111 Sum_probs=54.7
Q ss_pred chhHHhhcccCeEEEccCCC-CCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHH
Q 007197 434 PSSIMQMFQTSIFCLQPQGD-SYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEER 512 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GD-s~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~i 512 (613)
..+..+.|+.|..|++|..+ ..-...++|||.+| +|||.++.... -++-.|-..--+.++..|...-.-.|..+
T Consensus 267 ~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G-~PVI~s~~gg~----~Eiv~~~~~G~~l~~~~d~~~la~~I~~l 341 (380)
T PRK15484 267 PEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAG-KPVLASTKGGI----TEFVLEGITGYHLAEPMTSDSIISDINRT 341 (380)
T ss_pred HHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcC-CCEEEeCCCCc----HhhcccCCceEEEeCCCCHHHHHHHHHHH
Confidence 45778899999999999753 32234599999999 68999875311 12222322211233343333200023333
Q ss_pred HccCCHHHHHHHHHHHhh-hcceeeee
Q 007197 513 LKQISPEQIKEMRETVIN-LIPRVIYA 538 (613)
Q Consensus 513 L~sIp~e~i~~Mr~~l~~-v~~~f~Y~ 538 (613)
|. +.+..+|.++.++ +..+|.|.
T Consensus 342 l~---d~~~~~~~~~ar~~~~~~fsw~ 365 (380)
T PRK15484 342 LA---DPELTQIAEQAKDFVFSKYSWE 365 (380)
T ss_pred Hc---CHHHHHHHHHHHHHHHHhCCHH
Confidence 33 3345677777764 45666663
No 44
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=79.44 E-value=5.5 Score=40.41 Aligned_cols=90 Identities=10% Similarity=0.162 Sum_probs=56.6
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecch--hccccccHHH
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDD--IRKRNVSIEE 511 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~d--v~~~~~~L~~ 511 (613)
..++.+.|+.|.+.++|.........++|||.+|| |||..+..+. ..-+.-....+.++..+ +.+ .|..
T Consensus 269 ~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~-PvI~~~~~~~-----~~~i~~~~~g~~~~~~~~~~~~---~i~~ 339 (374)
T cd03817 269 REELPDYYKAADLFVFASTTETQGLVLLEAMAAGL-PVVAVDAPGL-----PDLVADGENGFLFPPGDEALAE---ALLR 339 (374)
T ss_pred hHHHHHHHHHcCEEEecccccCcChHHHHHHHcCC-cEEEeCCCCh-----hhheecCceeEEeCCCCHHHHH---HHHH
Confidence 35688899999999999865555567999999987 6666665321 11122223444555444 332 2444
Q ss_pred HHccCCHHHHHHHHHHHhhhcce
Q 007197 512 RLKQISPEQIKEMRETVINLIPR 534 (613)
Q Consensus 512 iL~sIp~e~i~~Mr~~l~~v~~~ 534 (613)
+|. .++...+|+++.++....
T Consensus 340 l~~--~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 340 LLQ--DPELRRRLSKNAEESAEK 360 (374)
T ss_pred HHh--ChHHHHHHHHHHHHHHHH
Confidence 443 355667888888776655
No 45
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=79.15 E-value=3.9 Score=42.24 Aligned_cols=90 Identities=14% Similarity=0.291 Sum_probs=51.1
Q ss_pred hhHHhhcccCeEEEccCCC-CCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecch-hccccccHHHH
Q 007197 435 SSIMQMFQTSIFCLQPQGD-SYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDD-IRKRNVSIEER 512 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GD-s~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~d-v~~~~~~L~~i 512 (613)
.+..+.+..+..++.|.-. ......++|||.+|| |||.++..... ++ +.- -...++..+ +.+ .|..+
T Consensus 259 ~~~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~-PvI~s~~~~~~----e~-~~~--~g~~~~~~~~l~~---~i~~l 327 (363)
T cd04955 259 QELLELLRYAALFYLHGHSVGGTNPSLLEAMAYGC-PVLASDNPFNR----EV-LGD--KAIYFKVGDDLAS---LLEEL 327 (363)
T ss_pred HHHHHHHHhCCEEEeCCccCCCCChHHHHHHHcCC-CEEEecCCccc----ee-ecC--CeeEecCchHHHH---HHHHH
Confidence 3566778888888877544 333445999999999 78887752110 11 222 223334444 433 24343
Q ss_pred HccCCHHHHHHHHHHHhhhc-ceeee
Q 007197 513 LKQISPEQIKEMRETVINLI-PRVIY 537 (613)
Q Consensus 513 L~sIp~e~i~~Mr~~l~~v~-~~f~Y 537 (613)
|+ .++.+.+|.++..+.. ..|.|
T Consensus 328 ~~--~~~~~~~~~~~~~~~~~~~fs~ 351 (363)
T cd04955 328 EA--DPEEVSAMAKAARERIREKYTW 351 (363)
T ss_pred Hh--CHHHHHHHHHHHHHHHHHhCCH
Confidence 33 2467778887776543 33444
No 46
>PRK00654 glgA glycogen synthase; Provisional
Probab=78.78 E-value=8.3 Score=42.98 Aligned_cols=91 Identities=9% Similarity=0.185 Sum_probs=54.4
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCc-----ceEEEeecchhccccccHH
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYS-----SYSVFIPEDDIRKRNVSIE 510 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~-----~fSV~I~e~dv~~~~~~L~ 510 (613)
.....++.+.+++.|.=..+..-.+.|||.+||+||+-.-+- . -+...|.. .-.+.++..|... |.
T Consensus 349 ~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG-~----~e~v~~~~~~~~~~~G~lv~~~d~~~----la 419 (466)
T PRK00654 349 LAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGG-L----ADTVIDYNPEDGEATGFVFDDFNAED----LL 419 (466)
T ss_pred HHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCC-c----cceeecCCCCCCCCceEEeCCCCHHH----HH
Confidence 345788999999999766666667999999999887643221 0 11112321 3456667666543 44
Q ss_pred HHHccC-----CHHHHHHHHHHHhhhcceeee
Q 007197 511 ERLKQI-----SPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 511 ~iL~sI-----p~e~i~~Mr~~l~~v~~~f~Y 537 (613)
+.|..+ .++...+|.++.. ...|.|
T Consensus 420 ~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw 449 (466)
T PRK00654 420 RALRRALELYRQPPLWRALQRQAM--AQDFSW 449 (466)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHh--ccCCCh
Confidence 433322 3455667766653 244444
No 47
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=78.49 E-value=3.3 Score=43.85 Aligned_cols=94 Identities=9% Similarity=0.038 Sum_probs=54.9
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHc
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLK 514 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~ 514 (613)
....+.|+.+.+++.|.........++|||.+| +|||.++... .-++-.+.. -.+.++. +...-.-.|.+++.
T Consensus 291 ~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G-~PvI~s~~~~----~~e~i~~~~-~g~~~~~-~~~~~a~~i~~l~~ 363 (392)
T cd03805 291 SQKELLLSSARALLYTPSNEHFGIVPLEAMYAG-KPVIACNSGG----PLETVVDGE-TGFLCEP-TPEEFAEAMLKLAN 363 (392)
T ss_pred HHHHHHHhhCeEEEECCCcCCCCchHHHHHHcC-CCEEEECCCC----cHHHhccCC-ceEEeCC-CHHHHHHHHHHHHh
Confidence 355788999999998876554455689999999 5777777521 112223433 2333443 33220002444443
Q ss_pred cCCHHHHHHHHHHHhh-hcceeee
Q 007197 515 QISPEQIKEMRETVIN-LIPRVIY 537 (613)
Q Consensus 515 sIp~e~i~~Mr~~l~~-v~~~f~Y 537 (613)
.++...+|+++.++ +...|.|
T Consensus 364 --~~~~~~~~~~~a~~~~~~~~s~ 385 (392)
T cd03805 364 --DPDLADRMGAAGRKRVKEKFST 385 (392)
T ss_pred --ChHHHHHHHHHHHHHHHHhcCH
Confidence 35678888887765 4455555
No 48
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=77.85 E-value=13 Score=41.59 Aligned_cols=92 Identities=15% Similarity=0.113 Sum_probs=56.0
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCC-----cceEEEeecchhcccccc
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNY-----SSYSVFIPEDDIRKRNVS 508 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw-----~~fSV~I~e~dv~~~~~~ 508 (613)
..+..+.|..+..++.|.-..-....++|||.+|| |||.+|..... ++--+. ....+.++..|...-.-.
T Consensus 361 ~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~-PVVatd~g~~~----elv~~~~~~~~g~~G~lv~~~d~~~la~a 435 (475)
T cd03813 361 FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGI-PVVATDVGSCR----ELIEGADDEALGPAGEVVPPADPEALARA 435 (475)
T ss_pred CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCC-CEEECCCCChH----HHhcCCcccccCCceEEECCCCHHHHHHH
Confidence 34577788889988888633323345999999999 88888753221 222221 235667776665430002
Q ss_pred HHHHHccCCHHHHHHHHHHHhhhc
Q 007197 509 IEERLKQISPEQIKEMRETVINLI 532 (613)
Q Consensus 509 L~~iL~sIp~e~i~~Mr~~l~~v~ 532 (613)
|..+|. .++...+|.++.++..
T Consensus 436 i~~ll~--~~~~~~~~~~~a~~~v 457 (475)
T cd03813 436 ILRLLK--DPELRRAMGEAGRKRV 457 (475)
T ss_pred HHHHhc--CHHHHHHHHHHHHHHH
Confidence 333333 4777888888776533
No 49
>PRK14098 glycogen synthase; Provisional
Probab=77.48 E-value=27 Score=39.52 Aligned_cols=91 Identities=11% Similarity=0.066 Sum_probs=54.8
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCC---cceEEEeecchhccccccHHHH
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNY---SSYSVFIPEDDIRKRNVSIEER 512 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw---~~fSV~I~e~dv~~~~~~L~~i 512 (613)
...+.|+.|.+++.|.-..+......+||.+||+||+...+- . -+.-.|+ ..-.+.++..|... |.+.
T Consensus 374 ~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GG-l----~d~v~~~~~~~~~G~l~~~~d~~~----la~a 444 (489)
T PRK14098 374 FFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGG-I----VETIEEVSEDKGSGFIFHDYTPEA----LVAK 444 (489)
T ss_pred HHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCC-C----ceeeecCCCCCCceeEeCCCCHHH----HHHH
Confidence 457789999999999876666667899999999998865431 0 0111121 23345566665543 4443
Q ss_pred Hcc----C-CHHHHHHHHHHHhhhcceeee
Q 007197 513 LKQ----I-SPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 513 L~s----I-p~e~i~~Mr~~l~~v~~~f~Y 537 (613)
|.. . .++++.+|+++. +...|.|
T Consensus 445 i~~~l~~~~~~~~~~~~~~~~--~~~~fsw 472 (489)
T PRK14098 445 LGEALALYHDEERWEELVLEA--MERDFSW 472 (489)
T ss_pred HHHHHHHHcCHHHHHHHHHHH--hcCCCCh
Confidence 332 1 356666666543 2344555
No 50
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=77.25 E-value=2.3 Score=49.30 Aligned_cols=114 Identities=11% Similarity=0.122 Sum_probs=67.8
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeec-------chhcccc
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPE-------DDIRKRN 506 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e-------~dv~~~~ 506 (613)
...|.+.++.+..++.|.-..+...-..|||.+|+ |||.++.+..-.+.-+.-.+-.+..|.|.. +.+.+
T Consensus 465 g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~-PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~-- 541 (590)
T cd03793 465 GLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGI-PSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQ-- 541 (590)
T ss_pred CcchHHHhhhceEEEeccccCCCCcHHHHHHHcCC-CEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHH--
Confidence 34789999999999999866655555899999995 999998743211111221244467788873 22322
Q ss_pred ccHHHHHcc---CCHHHHHHHHHHHhhhcceeeeeCCCCCcCCcCCHHHHHH
Q 007197 507 VSIEERLKQ---ISPEQIKEMRETVINLIPRVIYADPRSKLATLKDSFDVAV 555 (613)
Q Consensus 507 ~~L~~iL~s---Ip~e~i~~Mr~~l~~v~~~f~Y~~p~~~~~~~~DAFd~~l 555 (613)
|.+.|.. -+..+....|....++...|.|..-...+ ..|.++++
T Consensus 542 --La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y---~~A~~~Al 588 (590)
T cd03793 542 --LTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYY---RKARQLAL 588 (590)
T ss_pred --HHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHH---HHHHHHHh
Confidence 3333333 34444444444445788888886543321 35555554
No 51
>PHA01630 putative group 1 glycosyl transferase
Probab=76.23 E-value=4.7 Score=43.22 Aligned_cols=41 Identities=12% Similarity=0.169 Sum_probs=31.3
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
.+..+.|+.+..++.|.-......-+.|||.+|| |||.++.
T Consensus 201 ~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~-PVIas~~ 241 (331)
T PHA01630 201 DDIYSLFAGCDILFYPVRGGAFEIPVIEALALGL-DVVVTEK 241 (331)
T ss_pred HHHHHHHHhCCEEEECCccccCChHHHHHHHcCC-CEEEeCC
Confidence 5678889999999998644433445999999998 6777764
No 52
>PRK14099 glycogen synthase; Provisional
Probab=75.43 E-value=6.3 Score=44.55 Aligned_cols=93 Identities=11% Similarity=0.154 Sum_probs=56.0
Q ss_pred hHHhhc-ccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCc--------ceEEEeecchhcccc
Q 007197 436 SIMQMF-QTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYS--------SYSVFIPEDDIRKRN 506 (613)
Q Consensus 436 ~y~~~m-~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~--------~fSV~I~e~dv~~~~ 506 (613)
+....+ +.|.+.+.|.=..+..-...+||.+||+||+-.-+- . -+.-.+.. .-.+.++..|...
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GG-l----~d~V~~~~~~~~~~~~~~G~l~~~~d~~~-- 433 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGG-L----ADTVVDANEMAIATGVATGVQFSPVTADA-- 433 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCC-c----cceeecccccccccCCCceEEeCCCCHHH--
Confidence 445555 568888888766666667899999999998843221 0 11113442 3456667666543
Q ss_pred ccHHHHHcc----C-CHHHHHHHHHHHhhhcceeeeeC
Q 007197 507 VSIEERLKQ----I-SPEQIKEMRETVINLIPRVIYAD 539 (613)
Q Consensus 507 ~~L~~iL~s----I-p~e~i~~Mr~~l~~v~~~f~Y~~ 539 (613)
|.+.|.. + .++...+|+++.. ...|.|..
T Consensus 434 --La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~ 467 (485)
T PRK14099 434 --LAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRN 467 (485)
T ss_pred --HHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHH
Confidence 4444432 2 4677788887764 35555543
No 53
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=73.95 E-value=7.2 Score=40.01 Aligned_cols=95 Identities=15% Similarity=0.126 Sum_probs=54.8
Q ss_pred chhHHhhcccCeEEEccCCC-------CCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhcccc
Q 007197 434 PSSIMQMFQTSIFCLQPQGD-------SYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRN 506 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GD-------s~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~ 506 (613)
..+..+.|+++.+++.|... +. ...++|||.+||-. |.++.... -++..+. .-...+++.+..+-.
T Consensus 246 ~~~l~~~~~~adi~l~~s~~~~~~~~e~~-~~~~~Ea~a~G~Pv-i~~~~~~~----~~~i~~~-~~g~~~~~~~~~~l~ 318 (355)
T cd03799 246 QEEVRELLRAADLFVLPSVTAADGDREGL-PVVLMEAMAMGLPV-ISTDVSGI----PELVEDG-ETGLLVPPGDPEALA 318 (355)
T ss_pred hHHHHHHHHhCCEEEecceecCCCCccCc-cHHHHHHHHcCCCE-EecCCCCc----chhhhCC-CceEEeCCCCHHHHH
Confidence 45788899999999998653 44 45599999999955 55554211 1121222 234555554443200
Q ss_pred ccHHHHHccCCHHHHHHHHHHHhhh-cceeee
Q 007197 507 VSIEERLKQISPEQIKEMRETVINL-IPRVIY 537 (613)
Q Consensus 507 ~~L~~iL~sIp~e~i~~Mr~~l~~v-~~~f~Y 537 (613)
-.|..+|. .+++..+|.++..+. ...|.|
T Consensus 319 ~~i~~~~~--~~~~~~~~~~~a~~~~~~~~s~ 348 (355)
T cd03799 319 DAIERLLD--DPELRREMGEAGRARVEEEFDI 348 (355)
T ss_pred HHHHHHHh--CHHHHHHHHHHHHHHHHHhcCH
Confidence 02444443 366678888887653 344544
No 54
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=73.32 E-value=6.8 Score=43.52 Aligned_cols=91 Identities=10% Similarity=0.128 Sum_probs=54.6
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCc-----ceEEEeecchhccccccHH
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYS-----SYSVFIPEDDIRKRNVSIE 510 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~-----~fSV~I~e~dv~~~~~~L~ 510 (613)
...+.++.+.+++.|.-..+..-.+.|||.+||.||. ++.... -+...|.. ...+.++..+... |.
T Consensus 358 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~-s~~gg~----~e~v~~~~~~~~~~~G~l~~~~d~~~----la 428 (473)
T TIGR02095 358 LAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIV-RRTGGL----ADTVVDGDPEAESGTGFLFEEYDPGA----LL 428 (473)
T ss_pred HHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEE-ccCCCc----cceEecCCCCCCCCceEEeCCCCHHH----HH
Confidence 4567899999999998777666678999999996654 443111 11112321 4456666655543 33
Q ss_pred HHHccC------CHHHHHHHHHHHhhhcceeee
Q 007197 511 ERLKQI------SPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 511 ~iL~sI------p~e~i~~Mr~~l~~v~~~f~Y 537 (613)
+.|..+ .++...+|.++.. ...|.|
T Consensus 429 ~~i~~~l~~~~~~~~~~~~~~~~~~--~~~fsw 459 (473)
T TIGR02095 429 AALSRALRLYRQDPSLWEALQKNAM--SQDFSW 459 (473)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHh--ccCCCc
Confidence 333322 4566777776653 244555
No 55
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=72.27 E-value=5.9 Score=43.68 Aligned_cols=94 Identities=9% Similarity=0.133 Sum_probs=51.8
Q ss_pred hHHhhcccC----eEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHH
Q 007197 436 SIMQMFQTS----IFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEE 511 (613)
Q Consensus 436 ~y~~~m~~S----kFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~ 511 (613)
+..+.|+.+ ..++.|.-.......+.|||.+|| |||.++.... -++ ++-.+-.+.++..|...-.-.|.+
T Consensus 329 ~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~-PvV~s~~gg~----~ei-v~~~~~G~lv~~~d~~~la~~i~~ 402 (439)
T TIGR02472 329 DVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGL-PIVATDDGGP----RDI-IANCRNGLLVDVLDLEAIASALED 402 (439)
T ss_pred HHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCC-CEEEeCCCCc----HHH-hcCCCcEEEeCCCCHHHHHHHHHH
Confidence 444555544 344455433333345999999999 9999885211 111 333344566776665430002434
Q ss_pred HHccCCHHHHHHHHHHHhh-hcceeee
Q 007197 512 RLKQISPEQIKEMRETVIN-LIPRVIY 537 (613)
Q Consensus 512 iL~sIp~e~i~~Mr~~l~~-v~~~f~Y 537 (613)
+|. .+++..+|.++.++ +..+|.|
T Consensus 403 ll~--~~~~~~~~~~~a~~~~~~~fsw 427 (439)
T TIGR02472 403 ALS--DSSQWQLWSRNGIEGVRRHYSW 427 (439)
T ss_pred HHh--CHHHHHHHHHHHHHHHHHhCCH
Confidence 443 46667777777654 5556655
No 56
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=71.65 E-value=5.1 Score=42.58 Aligned_cols=40 Identities=13% Similarity=0.063 Sum_probs=30.3
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecC
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHP 475 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD 475 (613)
..+.+.++.+..++.|.........++|||.+| +|||.++
T Consensus 249 ~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G-~Pvv~s~ 288 (359)
T PRK09922 249 EVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYG-IPCISSD 288 (359)
T ss_pred HHHHHHHhcCcEEEECCcccCcChHHHHHHHcC-CCEEEeC
Confidence 345667788888888876544455699999999 5888887
No 57
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=71.44 E-value=11 Score=38.87 Aligned_cols=91 Identities=15% Similarity=0.202 Sum_probs=55.7
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHH
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERL 513 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL 513 (613)
...+.+.|+.|.+++.|.........++|||.+|| |||.++..... ++ +.-....+.++..+...-.-.|.+++
T Consensus 255 ~~~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~-PvI~~~~~~~~----e~-~~~~~~g~~~~~~~~~~~~~~l~~l~ 328 (365)
T cd03825 255 DESLALIYSAADVFVVPSLQENFPNTAIEALACGT-PVVAFDVGGIP----DI-VDHGVTGYLAKPGDPEDLAEGIEWLL 328 (365)
T ss_pred HHHHHHHHHhCCEEEeccccccccHHHHHHHhcCC-CEEEecCCCCh----hh-eeCCCceEEeCCCCHHHHHHHHHHHH
Confidence 34577889999999999876555667999999998 56766642221 11 22223455566554432000233444
Q ss_pred ccCCHHHHHHHHHHHhhhc
Q 007197 514 KQISPEQIKEMRETVINLI 532 (613)
Q Consensus 514 ~sIp~e~i~~Mr~~l~~v~ 532 (613)
. .+++..+|.++.....
T Consensus 329 ~--~~~~~~~~~~~~~~~~ 345 (365)
T cd03825 329 A--DPDEREELGEAARELA 345 (365)
T ss_pred h--CHHHHHHHHHHHHHHH
Confidence 3 4666788888776643
No 58
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=68.30 E-value=7.7 Score=41.85 Aligned_cols=42 Identities=7% Similarity=-0.043 Sum_probs=31.8
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
..++.+.|+.+..++.|.-.......+.|||.+|| |||.++.
T Consensus 260 ~~~~~~~l~~ad~~v~pS~~E~~g~~~~EAma~G~-PVI~s~~ 301 (398)
T cd03796 260 HERVRDVLVQGHIFLNTSLTEAFCIAIVEAASCGL-LVVSTRV 301 (398)
T ss_pred HHHHHHHHHhCCEEEeCChhhccCHHHHHHHHcCC-CEEECCC
Confidence 35788889999999888644333346999999998 6777764
No 59
>PLN02939 transferase, transferring glycosyl groups
Probab=64.06 E-value=29 Score=42.73 Aligned_cols=95 Identities=12% Similarity=0.133 Sum_probs=56.1
Q ss_pred HhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCc--------ceEEEeecchhccccccH
Q 007197 438 MQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYS--------SYSVFIPEDDIRKRNVSI 509 (613)
Q Consensus 438 ~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~--------~fSV~I~e~dv~~~~~~L 509 (613)
...++.|.+++.|.=..+..-.+.+||.+||+||+..-+- .-+...|++ .-.+.++..|...-.-.|
T Consensus 851 h~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGG-----L~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL 925 (977)
T PLN02939 851 HSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGG-----LNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSAL 925 (977)
T ss_pred HHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCC-----CcceeecCCccccccCCCceEEecCCCHHHHHHHH
Confidence 4689999999999866766667999999999998765431 112223332 234445555543200013
Q ss_pred HHHHccC--CHHHHHHHHHHHhhhcceeeeeC
Q 007197 510 EERLKQI--SPEQIKEMRETVINLIPRVIYAD 539 (613)
Q Consensus 510 ~~iL~sI--p~e~i~~Mr~~l~~v~~~f~Y~~ 539 (613)
..+|..+ .++.+.+|+++. +...|.|..
T Consensus 926 ~rAL~~~~~dpe~~~~L~~~a--m~~dFSWe~ 955 (977)
T PLN02939 926 ERAFNYYKRKPEVWKQLVQKD--MNIDFSWDS 955 (977)
T ss_pred HHHHHHhccCHHHHHHHHHHH--HHhcCCHHH
Confidence 3333322 477788887754 335566633
No 60
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=61.69 E-value=15 Score=40.58 Aligned_cols=85 Identities=12% Similarity=0.207 Sum_probs=51.2
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcc-----eEEEeecchhccccccHH
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSS-----YSVFIPEDDIRKRNVSIE 510 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~-----fSV~I~e~dv~~~~~~L~ 510 (613)
....+++.+.+.+.|.-..+....+.|||.+||.||.-.-+. . -+.-.|..+ -.+.++..+... |.
T Consensus 363 ~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg-~----~e~v~~~~~~~~~~~G~~~~~~~~~~----l~ 433 (476)
T cd03791 363 LAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGG-L----ADTVIDYNEDTGEGTGFVFEGYNADA----LL 433 (476)
T ss_pred HHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCC-c----cceEeCCcCCCCCCCeEEeCCCCHHH----HH
Confidence 445788999999999877666677899999999887543321 0 111134321 355566555432 33
Q ss_pred HHHccC-----CHHHHHHHHHHHh
Q 007197 511 ERLKQI-----SPEQIKEMRETVI 529 (613)
Q Consensus 511 ~iL~sI-----p~e~i~~Mr~~l~ 529 (613)
+.|..+ .+++..+|.++..
T Consensus 434 ~~i~~~l~~~~~~~~~~~~~~~~~ 457 (476)
T cd03791 434 AALRRALALYRDPEAWRKLQRNAM 457 (476)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHh
Confidence 333321 2566777776654
No 61
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=61.36 E-value=18 Score=39.49 Aligned_cols=92 Identities=11% Similarity=0.148 Sum_probs=48.9
Q ss_pred hHHhhcccC--eEEEccC-CCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeec-chhccccccHHH
Q 007197 436 SIMQMFQTS--IFCLQPQ-GDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPE-DDIRKRNVSIEE 511 (613)
Q Consensus 436 ~y~~~m~~S--kFCL~P~-GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e-~dv~~~~~~L~~ 511 (613)
+..+.++.+ ..++.|. ..+. .-.+.|||.+|+ |||.++-..- -++-.|- .-.+.++. .+..+-.-.|..
T Consensus 301 e~~~~~~~~~~~v~v~~S~~Eg~-p~~llEAma~G~-PVIas~vgg~----~e~i~~~-~~G~l~~~~~~~~~la~~I~~ 373 (407)
T cd04946 301 EVYKLYKENPVDVFVNLSESEGL-PVSIMEAMSFGI-PVIATNVGGT----PEIVDNG-GNGLLLSKDPTPNELVSSLSK 373 (407)
T ss_pred HHHHHHhhcCCCEEEeCCccccc-cHHHHHHHHcCC-CEEeCCCCCc----HHHhcCC-CcEEEeCCCCCHHHHHHHHHH
Confidence 455666543 2333343 3333 345999999996 9998874211 1222232 23444443 233320002444
Q ss_pred HHccCCHHHHHHHHHHHhhhc-ceee
Q 007197 512 RLKQISPEQIKEMRETVINLI-PRVI 536 (613)
Q Consensus 512 iL~sIp~e~i~~Mr~~l~~v~-~~f~ 536 (613)
++. .+++..+|+++.++.+ .+|.
T Consensus 374 ll~--~~~~~~~m~~~ar~~~~~~f~ 397 (407)
T cd04946 374 FID--NEEEYQTMREKAREKWEENFN 397 (407)
T ss_pred HHh--CHHHHHHHHHHHHHHHHHHcC
Confidence 444 5888999999887754 3443
No 62
>KOG2619 consensus Fucosyltransferase [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=58.95 E-value=76 Score=35.13 Aligned_cols=159 Identities=18% Similarity=0.193 Sum_probs=83.0
Q ss_pred cccceEEEeecCCCCCCCCCCCCCCccCCC-CCcccchhhhhccccCCCeeEEeccCCCCCCChhhHHHHHHHhhcCCCc
Q 007197 341 TKNMSMLVVESSPWGANDFAIPYPTYFHPS-KDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVG 419 (613)
Q Consensus 341 ~~N~til~ve~~~w~~~d~~iPypt~fhP~-kD~~vp~w~~~~~~~~R~~L~~FaG~~~~~~~~~IR~~L~~~~~~~~~~ 419 (613)
+.|.||-.- .+.|+.+||--.-++. .++.+| ++ ..-..+++.++.+.-+..+ ..-|.++++.+...-..
T Consensus 156 ~fN~T~Tyr-----~dSd~~~pygy~~~~~~~~~~~p-~~-~~~~~k~~~~aw~vSnc~~---~~~R~~~~~~L~k~l~i 225 (372)
T KOG2619|consen 156 LFNWTMTYR-----RDSDLFVPYGYLEKPEANPVLVP-VN-SILSAKTKLAAWLVSNCIP---RSARLDYYKELMKHLEI 225 (372)
T ss_pred cccceEEEe-----ccCCCCCccceEeecccCceecc-cc-cccccccceeeeeccccCc---chHHHHHHHHHHhhCce
Confidence 566555442 2345555553322333 333333 22 1123556667777665543 45677777776554111
Q ss_pred -eeeeecCCCCcCCCchhHHhhcccCeEEEcc----CCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceE
Q 007197 420 -KLLECDFGESKCHSPSSIMQMFQTSIFCLQP----QGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYS 494 (613)
Q Consensus 420 -~~v~c~~g~~~c~~~~~y~~~m~~SkFCL~P----~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fS 494 (613)
..-+|......+.......+.+.+-||=|.- .-|=.|-+ |+-|+.+|.|||+++..+ ++.-++ .+-
T Consensus 226 D~YG~c~~~~~~~~~~~~~~~~~s~YKFyLAfENS~c~DYVTEK-fw~al~~gsVPVvlg~~n------~e~fvP-~~S- 296 (372)
T KOG2619|consen 226 DSYGECLRKNANRDPSDCLLETLSHYKFYLAFENSNCEDYVTEK-FWNALDAGSVPVVLGPPN------YENFVP-PDS- 296 (372)
T ss_pred eeccccccccccCCCCCcceeecccceEEEEecccCCcccccHH-HHhhhhcCcccEEECCcc------ccccCC-Ccc-
Confidence 1112210001112234567788889999874 23445555 999999999999999842 333333 233
Q ss_pred EEeecchhccccccHHHHHccCCHHH
Q 007197 495 VFIPEDDIRKRNVSIEERLKQISPEQ 520 (613)
Q Consensus 495 V~I~e~dv~~~~~~L~~iL~sIp~e~ 520 (613)
+|..+|..... +|...|+.+...+
T Consensus 297 -fI~vdDF~s~~-ela~ylk~L~~n~ 320 (372)
T KOG2619|consen 297 -FIHVDDFQSPQ-ELAAYLKKLDKNP 320 (372)
T ss_pred -eEehhhcCCHH-HHHHHHHHhhcCH
Confidence 34444443210 3667777775443
No 63
>PRK10307 putative glycosyl transferase; Provisional
Probab=57.90 E-value=11 Score=40.85 Aligned_cols=95 Identities=7% Similarity=0.050 Sum_probs=58.7
Q ss_pred chhHHhhcccCeEEEccCCCCC----CcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccH
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSY----TRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSI 509 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~----tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L 509 (613)
..++.+.|+.+..++.|.=.+. ....++|||.+| +|||.++...- .. .++ +. .-.+.++..|+.+ |
T Consensus 294 ~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G-~PVi~s~~~g~-~~-~~~-i~--~~G~~~~~~d~~~----l 363 (412)
T PRK10307 294 YDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASG-RNVVATAEPGT-EL-GQL-VE--GIGVCVEPESVEA----L 363 (412)
T ss_pred HHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcC-CCEEEEeCCCc-hH-HHH-Hh--CCcEEeCCCCHHH----H
Confidence 3577888999999988743221 123389999999 58888764210 00 011 33 3566677666654 5
Q ss_pred HHHHccC--CHHHHHHHHHHHhhh-cceeeee
Q 007197 510 EERLKQI--SPEQIKEMRETVINL-IPRVIYA 538 (613)
Q Consensus 510 ~~iL~sI--p~e~i~~Mr~~l~~v-~~~f~Y~ 538 (613)
.+.|..+ .++...+|+++.++. ..+|.|.
T Consensus 364 a~~i~~l~~~~~~~~~~~~~a~~~~~~~fs~~ 395 (412)
T PRK10307 364 VAAIAALARQALLRPKLGTVAREYAERTLDKE 395 (412)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHH
Confidence 5555543 467778898888764 4466663
No 64
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=56.29 E-value=17 Score=45.16 Aligned_cols=94 Identities=10% Similarity=0.151 Sum_probs=55.3
Q ss_pred hHHhhcccC----eEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHH
Q 007197 436 SIMQMFQTS----IFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEE 511 (613)
Q Consensus 436 ~y~~~m~~S----kFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~ 511 (613)
+..+.|+.+ -.++.|.=...--.-+.|||.+|+ |||.++.... -++ +.-..-.+.|+..|... |.+
T Consensus 560 dvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGl-PVVASdvGG~----~EI-I~~g~nGlLVdP~D~ea----LA~ 629 (1050)
T TIGR02468 560 DVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL-PMVATKNGGP----VDI-HRVLDNGLLVDPHDQQA----IAD 629 (1050)
T ss_pred HHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCC-CEEEeCCCCc----HHH-hccCCcEEEECCCCHHH----HHH
Confidence 344555544 244445323332334999999996 9999875211 111 33344567777766553 443
Q ss_pred HHccC--CHHHHHHHHHHHhhhcceeeeeC
Q 007197 512 RLKQI--SPEQIKEMRETVINLIPRVIYAD 539 (613)
Q Consensus 512 iL~sI--p~e~i~~Mr~~l~~v~~~f~Y~~ 539 (613)
.|..+ .++...+|.++..+..+.|.|..
T Consensus 630 AL~~LL~Dpelr~~m~~~gr~~v~~FSWe~ 659 (1050)
T TIGR02468 630 ALLKLVADKQLWAECRQNGLKNIHLFSWPE 659 (1050)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHCCHHH
Confidence 33332 47778899999877767776643
No 65
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=49.38 E-value=1.2e+02 Score=32.91 Aligned_cols=84 Identities=13% Similarity=0.152 Sum_probs=49.6
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCC----CCCcceEEEeec-chhccccccHH
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLP----KNYSSYSVFIPE-DDIRKRNVSIE 510 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LP----lDw~~fSV~I~e-~dv~~~~~~L~ 510 (613)
+..+.|+.|.+++..+|. ..+.|||.+|+ |||+.+... -| +.. +.=..+.+.+.. +++.+ .|.
T Consensus 266 ~~~~~~~~aDl~I~k~gg----~tl~EA~a~G~-PvI~~~~~p-gq---e~~N~~~~~~~G~g~~~~~~~~l~~---~i~ 333 (391)
T PRK13608 266 HMNEWMASSQLMITKPGG----ITISEGLARCI-PMIFLNPAP-GQ---ELENALYFEEKGFGKIADTPEEAIK---IVA 333 (391)
T ss_pred hHHHHHHhhhEEEeCCch----HHHHHHHHhCC-CEEECCCCC-Cc---chhHHHHHHhCCcEEEeCCHHHHHH---HHH
Confidence 567889999999885542 24899999997 888875310 00 110 111233443322 22222 244
Q ss_pred HHHccCCHHHHHHHHHHHhhhcc
Q 007197 511 ERLKQISPEQIKEMRETVINLIP 533 (613)
Q Consensus 511 ~iL~sIp~e~i~~Mr~~l~~v~~ 533 (613)
++|. .++++.+|+++..++..
T Consensus 334 ~ll~--~~~~~~~m~~~~~~~~~ 354 (391)
T PRK13608 334 SLTN--GNEQLTNMISTMEQDKI 354 (391)
T ss_pred HHhc--CHHHHHHHHHHHHHhcC
Confidence 4443 57888999999887654
No 66
>PHA01633 putative glycosyl transferase group 1
Probab=48.61 E-value=17 Score=39.35 Aligned_cols=41 Identities=20% Similarity=0.324 Sum_probs=33.1
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
.+..+.++.|.+.+.|.-......-+.|||.+|| |||.++-
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~-PVVas~~ 255 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGT-PVIHQLM 255 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCC-CEEEccC
Confidence 4567889999988888655555555999999999 9999875
No 67
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=47.68 E-value=1.6e+02 Score=31.19 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=27.9
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecC
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHP 475 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD 475 (613)
..++...|..+.+++.+.|. -+.||+.+|| |||...
T Consensus 265 ~~~~~~~l~~ad~vv~~Sg~-----~~~EA~a~g~-PvI~~~ 300 (365)
T TIGR00236 265 YLDFLNLAANSHLILTDSGG-----VQEEAPSLGK-PVLVLR 300 (365)
T ss_pred hHHHHHHHHhCCEEEECChh-----HHHHHHHcCC-CEEECC
Confidence 34678899999999887653 2789999997 788753
No 68
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=46.17 E-value=33 Score=35.70 Aligned_cols=87 Identities=15% Similarity=0.217 Sum_probs=49.5
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCc--cccc-cccCCCCCcceEEEeecch--hccccccHH
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSA--YTQY-TWHLPKNYSSYSVFIPEDD--IRKRNVSIE 510 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~sa--y~qy-p~~LPlDw~~fSV~I~e~d--v~~~~~~L~ 510 (613)
++.+.|..+..++.+.| ...++|||.+|+ |||+.+... -.|. .-+. +.-....+.++..+ ...-.-.|.
T Consensus 243 ~~~~~l~~ad~~v~~~g----~~~l~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~-i~~~~~G~~~~~~~~~~~~l~~~i~ 316 (348)
T TIGR01133 243 NMAAAYAAADLVISRAG----ASTVAELAAAGV-PAILIPYPYAADDQYYNAKF-LEDLGAGLVIRQKELLPEKLLEALL 316 (348)
T ss_pred CHHHHHHhCCEEEECCC----hhHHHHHHHcCC-CEEEeeCCCCccchhhHHHH-HHHCCCEEEEecccCCHHHHHHHHH
Confidence 67899999999999876 234899999997 777754210 0000 0011 22234455565443 221000244
Q ss_pred HHHccCCHHHHHHHHHHHhh
Q 007197 511 ERLKQISPEQIKEMRETVIN 530 (613)
Q Consensus 511 ~iL~sIp~e~i~~Mr~~l~~ 530 (613)
++|. .++...+|.++..+
T Consensus 317 ~ll~--~~~~~~~~~~~~~~ 334 (348)
T TIGR01133 317 KLLL--DPANLEAMAEAARK 334 (348)
T ss_pred HHHc--CHHHHHHHHHHHHh
Confidence 4443 47777888887754
No 69
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=45.54 E-value=57 Score=35.19 Aligned_cols=86 Identities=13% Similarity=0.312 Sum_probs=48.5
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCC--CCCcceEEEee-cchhccccccHHHH
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLP--KNYSSYSVFIP-EDDIRKRNVSIEER 512 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LP--lDw~~fSV~I~-e~dv~~~~~~L~~i 512 (613)
+..+.|+.|.+.+.+.|- -.+.|||.+|| |||+.+-.. -|..-..+ ++ ....+.+. .+++.+ .|.++
T Consensus 275 ~~~~l~~aaDv~V~~~g~----~ti~EAma~g~-PvI~~~~~p-gqe~gn~~~i~~-~g~g~~~~~~~~la~---~i~~l 344 (382)
T PLN02605 275 NMEEWMGACDCIITKAGP----GTIAEALIRGL-PIILNGYIP-GQEEGNVPYVVD-NGFGAFSESPKEIAR---IVAEW 344 (382)
T ss_pred cHHHHHHhCCEEEECCCc----chHHHHHHcCC-CEEEecCCC-ccchhhHHHHHh-CCceeecCCHHHHHH---HHHHH
Confidence 578889999988887762 23899999998 777765210 00000000 22 33444442 122322 24444
Q ss_pred HccCCHHHHHHHHHHHhhhc
Q 007197 513 LKQISPEQIKEMRETVINLI 532 (613)
Q Consensus 513 L~sIp~e~i~~Mr~~l~~v~ 532 (613)
|.. .++...+|+++.++..
T Consensus 345 l~~-~~~~~~~m~~~~~~~~ 363 (382)
T PLN02605 345 FGD-KSDELEAMSENALKLA 363 (382)
T ss_pred HcC-CHHHHHHHHHHHHHhc
Confidence 442 3678888888877643
No 70
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=45.28 E-value=52 Score=35.88 Aligned_cols=106 Identities=9% Similarity=0.148 Sum_probs=58.2
Q ss_pred hhHHhhcccCeEEEccCCC--CCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEee-cchhccccccHHH
Q 007197 435 SSIMQMFQTSIFCLQPQGD--SYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIP-EDDIRKRNVSIEE 511 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GD--s~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~-e~dv~~~~~~L~~ 511 (613)
.+....++.+..|+++... +.+. .+.|||.+|| |||.+++..-.....+. +.-..+.+.+. .+++.+ .|..
T Consensus 311 ~el~~~y~~aDi~~v~~S~~e~~g~-~~lEAma~G~-PVI~g~~~~~~~e~~~~-~~~~g~~~~~~d~~~La~---~l~~ 384 (425)
T PRK05749 311 GELGLLYAIADIAFVGGSLVKRGGH-NPLEPAAFGV-PVISGPHTFNFKEIFER-LLQAGAAIQVEDAEDLAK---AVTY 384 (425)
T ss_pred HHHHHHHHhCCEEEECCCcCCCCCC-CHHHHHHhCC-CEEECCCccCHHHHHHH-HHHCCCeEEECCHHHHHH---HHHH
Confidence 4678889999887765321 2222 3899999997 88987652100000111 11123444322 122332 2444
Q ss_pred HHccCCHHHHHHHHHHHhhhcceeeeeCCCCCcCCcCCHHHHHHHHHHH
Q 007197 512 RLKQISPEQIKEMRETVINLIPRVIYADPRSKLATLKDSFDVAVQSIID 560 (613)
Q Consensus 512 iL~sIp~e~i~~Mr~~l~~v~~~f~Y~~p~~~~~~~~DAFd~~l~~L~~ 560 (613)
+|. .++...+|.++.++..... .+|.+.+++.|..
T Consensus 385 ll~--~~~~~~~m~~~a~~~~~~~------------~~~~~~~~~~l~~ 419 (425)
T PRK05749 385 LLT--DPDARQAYGEAGVAFLKQN------------QGALQRTLQLLEP 419 (425)
T ss_pred Hhc--CHHHHHHHHHHHHHHHHhC------------ccHHHHHHHHHHH
Confidence 443 4777888888877765331 2566777666653
No 71
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=45.10 E-value=82 Score=33.19 Aligned_cols=105 Identities=17% Similarity=0.247 Sum_probs=57.9
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC-C--cccccc-ccCCCCCcceEEEeecchhc-cccc-c
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG-S--AYTQYT-WHLPKNYSSYSVFIPEDDIR-KRNV-S 508 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~-s--ay~qyp-~~LPlDw~~fSV~I~e~dv~-~~~~-~ 508 (613)
.++.+.|..+..+++..| ...++|||.+|+ |||+.+. . ...|.. -+.-.+ ....+.++.+++. +.-. .
T Consensus 244 ~~~~~~~~~~d~~i~~~g----~~~~~Ea~~~g~-Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~~~~~~~~l~~~ 317 (357)
T PRK00726 244 DDMAAAYAAADLVICRAG----ASTVAELAAAGL-PAILVPLPHAADDHQTANARALVD-AGAALLIPQSDLTPEKLAEK 317 (357)
T ss_pred hhHHHHHHhCCEEEECCC----HHHHHHHHHhCC-CEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEcccCCHHHHHHH
Confidence 367899999999998776 234899999998 5555331 0 000100 011123 3456667755531 1000 2
Q ss_pred HHHHHccCCHHHHHHHHHHHhhhcceeeeeCCCCCcCCcCCHHHHHHHHHHHH
Q 007197 509 IEERLKQISPEQIKEMRETVINLIPRVIYADPRSKLATLKDSFDVAVQSIIDR 561 (613)
Q Consensus 509 L~~iL~sIp~e~i~~Mr~~l~~v~~~f~Y~~p~~~~~~~~DAFd~~l~~L~~R 561 (613)
|.++|. .++...+|+++..++.. .++.+.+.+.+...
T Consensus 318 i~~ll~--~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~ 354 (357)
T PRK00726 318 LLELLS--DPERLEAMAEAARALGK--------------PDAAERLADLIEEL 354 (357)
T ss_pred HHHHHc--CHHHHHHHHHHHHhcCC--------------cCHHHHHHHHHHHH
Confidence 444444 36777888888654332 35666666655543
No 72
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=43.61 E-value=18 Score=32.25 Aligned_cols=41 Identities=15% Similarity=0.235 Sum_probs=27.1
Q ss_pred hhHHhhcccCeEEEccCC-CCCCcchHHHHHhhCceeEEecCC
Q 007197 435 SSIMQMFQTSIFCLQPQG-DSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~G-Ds~tsrRlfDAI~aGCIPVIisD~ 476 (613)
.++.+.|+++.+++.|.- +.-.+..++|+|.+|| |||.++.
T Consensus 62 ~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~G~-pvi~~~~ 103 (135)
T PF13692_consen 62 EELPEILAAADVGLIPSRFNEGFPNKLLEAMAAGK-PVIASDN 103 (135)
T ss_dssp HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCTT---EEEEHH
T ss_pred HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHhCC-CEEECCc
Confidence 479999999999999963 2234456999999998 5555554
No 73
>PLN02316 synthase/transferase
Probab=43.15 E-value=33 Score=42.64 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=32.9
Q ss_pred hhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 439 QMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 439 ~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
.+|+.+.+.|.|.=..+..-...+||.+||+||+-.-+
T Consensus 915 ~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vG 952 (1036)
T PLN02316 915 LIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTG 952 (1036)
T ss_pred HHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCC
Confidence 68999999999987777777899999999999986544
No 74
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=40.70 E-value=42 Score=36.05 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=30.0
Q ss_pred hhHHhhcccCeEEEccCCCC-----CCcchHHHHHhhCceeEEecC
Q 007197 435 SSIMQMFQTSIFCLQPQGDS-----YTRRSAFDSILAGCIPVFFHP 475 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs-----~tsrRlfDAI~aGCIPVIisD 475 (613)
.+..+.|+.+..|+.|.-.. .....++|+|.+|+ |||..+
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~-PVVat~ 309 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGK-PVVATP 309 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCC-CEEecC
Confidence 56788899999999995322 12234999999997 888655
No 75
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=37.81 E-value=83 Score=36.81 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=31.7
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
+....|+.+..++.|.-.......++|||.+|| |||.++.
T Consensus 465 Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~Gl-PVVATdv 504 (578)
T PRK15490 465 DVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGV-PVISTPA 504 (578)
T ss_pred hHHHHHHhCCEEEEcccccCccHHHHHHHHhCC-CEEEeCC
Confidence 566778888888888655555566999999999 9998874
No 76
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=36.31 E-value=43 Score=31.40 Aligned_cols=41 Identities=10% Similarity=0.097 Sum_probs=31.5
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
..+...+..|..+++|.........++|||.+|| |||.++.
T Consensus 173 ~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~-pvi~s~~ 213 (229)
T cd01635 173 ELLALLLAAADVFVLPSLREGFGLVVLEAMACGL-PVIATDV 213 (229)
T ss_pred HHHHHHhhcCCEEEecccccCcChHHHHHHhCCC-CEEEcCC
Confidence 3455566669999999887777777999999987 5566665
No 77
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=35.78 E-value=45 Score=34.33 Aligned_cols=41 Identities=12% Similarity=0.117 Sum_probs=32.4
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
.+..+.+.++.++++|.-.......++|||.+|| |||.++.
T Consensus 258 ~~~~~~~~~adi~v~ps~~E~~~~~~lEAma~G~-PvI~s~~ 298 (358)
T cd03812 258 NDVPELLQAMDVFLFPSLYEGLPLVLIEAQASGL-PCILSDT 298 (358)
T ss_pred CCHHHHHHhcCEEEecccccCCCHHHHHHHHhCC-CEEEEcC
Confidence 3567889999999999766556667999999999 5566654
No 78
>PLN00142 sucrose synthase
Probab=32.59 E-value=77 Score=38.58 Aligned_cols=97 Identities=8% Similarity=0.018 Sum_probs=53.3
Q ss_pred Hhhccc-CeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHcc-
Q 007197 438 MQMFQT-SIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQ- 515 (613)
Q Consensus 438 ~~~m~~-SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~s- 515 (613)
...++. +..+++|.=...-...+.|||.+|| |||.++.-. +-+. +.-..-.+.|+..|...-.-.|.+.|..
T Consensus 660 yr~iadaaDVfVlPS~~EgFGLvvLEAMA~Gl-PVVATdvGG----~~EI-V~dG~tG~LV~P~D~eaLA~aI~~lLekL 733 (815)
T PLN00142 660 YRYIADTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCQGG----PAEI-IVDGVSGFHIDPYHGDEAANKIADFFEKC 733 (815)
T ss_pred HHHHHhhCCEEEeCCcccCCCHHHHHHHHcCC-CEEEcCCCC----HHHH-hcCCCcEEEeCCCCHHHHHHHHHHHHHHh
Confidence 344443 3344566544444445999999997 788776421 1111 3334455666665544300013333322
Q ss_pred -CCHHHHHHHHHHH-hhhcceeeeeCC
Q 007197 516 -ISPEQIKEMRETV-INLIPRVIYADP 540 (613)
Q Consensus 516 -Ip~e~i~~Mr~~l-~~v~~~f~Y~~p 540 (613)
-.++...+|.++. .++..+|.|..-
T Consensus 734 l~Dp~lr~~mg~~Ar~rv~e~FSWe~~ 760 (815)
T PLN00142 734 KEDPSYWNKISDAGLQRIYECYTWKIY 760 (815)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 2577888888885 456677877543
No 79
>COG4128 Zot Zonula occludens toxin [General function prediction only]
Probab=31.47 E-value=42 Score=36.26 Aligned_cols=33 Identities=30% Similarity=0.416 Sum_probs=25.4
Q ss_pred ccccccccchhhhhhhhhcCCCCCCCceEEecCCchh
Q 007197 152 AGHEVKSFPFMKALETIENKSDPCGGRYIYVHDLPSR 188 (613)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~d~c~gr~IYVYdLP~~ 188 (613)
...-++.+||+.-.-++-+. .-|.|||+|+|.+
T Consensus 285 apvdlnahpfaDrrisila~----aYRdiymfd~p~~ 317 (398)
T COG4128 285 APVDLNAHPFADRRISILAP----AYRDIYMFDTPSE 317 (398)
T ss_pred cccccccccccccceeecch----hhhhhhcccCCCC
Confidence 45789999999988876542 2458999999974
No 80
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=29.63 E-value=46 Score=37.34 Aligned_cols=91 Identities=11% Similarity=0.098 Sum_probs=54.1
Q ss_pred chhHHhhcccCeEEEccC-CCCCCcchHHHHHhhCce---eEEecCCCccccccccCCCCCcceEEEeecchhccccccH
Q 007197 434 PSSIMQMFQTSIFCLQPQ-GDSYTRRSAFDSILAGCI---PVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSI 509 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~-GDs~tsrRlfDAI~aGCI---PVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L 509 (613)
..+..+.|+.+..++.|. -++.+-- +.|||.+||= |||+++...-. +. ..-.+.|+..|+..-.-.|
T Consensus 351 ~~el~~~y~~aDv~v~pS~~Eg~~lv-~lEAma~g~p~~g~vV~S~~~G~~----~~----~~~g~lv~p~d~~~la~ai 421 (460)
T cd03788 351 REELAALYRAADVALVTPLRDGMNLV-AKEYVACQDDDPGVLILSEFAGAA----EE----LSGALLVNPYDIDEVADAI 421 (460)
T ss_pred HHHHHHHHHhccEEEeCccccccCcc-cceeEEEecCCCceEEEeccccch----hh----cCCCEEECCCCHHHHHHHH
Confidence 456788888888888875 3344433 7899999996 69998743211 11 1335677666654300023
Q ss_pred HHHHccCCHHHHHHHHHHHhhhcce
Q 007197 510 EERLKQISPEQIKEMRETVINLIPR 534 (613)
Q Consensus 510 ~~iL~sIp~e~i~~Mr~~l~~v~~~ 534 (613)
.++|. .++++..+|.++.++....
T Consensus 422 ~~~l~-~~~~e~~~~~~~~~~~v~~ 445 (460)
T cd03788 422 HRALT-MPLEERRERHRKLREYVRT 445 (460)
T ss_pred HHHHc-CCHHHHHHHHHHHHHHHHh
Confidence 33333 3666777776666665443
No 81
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=29.42 E-value=1.7e+02 Score=31.28 Aligned_cols=86 Identities=16% Similarity=0.222 Sum_probs=45.8
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCcccccccc-CCCCCcceEEEee-cchhccccccHHHHH
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWH-LPKNYSSYSVFIP-EDDIRKRNVSIEERL 513 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~-LPlDw~~fSV~I~-e~dv~~~~~~L~~iL 513 (613)
+..+.|+.|...+.-.| ...+.|||.+|+ |||+.+...- |.... .-+.-..+.+.+. .+++.+ .|.++|
T Consensus 266 ~~~~l~~~aD~~v~~~g----g~t~~EA~a~g~-PvI~~~~~~g-~~~~n~~~~~~~G~~~~~~~~~~l~~---~i~~ll 336 (380)
T PRK13609 266 NIDELFRVTSCMITKPG----GITLSEAAALGV-PVILYKPVPG-QEKENAMYFERKGAAVVIRDDEEVFA---KTEALL 336 (380)
T ss_pred hHHHHHHhccEEEeCCC----chHHHHHHHhCC-CEEECCCCCC-cchHHHHHHHhCCcEEEECCHHHHHH---HHHHHH
Confidence 45678888887665444 234889999998 6887653100 00000 0011123344332 223332 244444
Q ss_pred ccCCHHHHHHHHHHHhhhc
Q 007197 514 KQISPEQIKEMRETVINLI 532 (613)
Q Consensus 514 ~sIp~e~i~~Mr~~l~~v~ 532 (613)
. .++...+|+++..++.
T Consensus 337 ~--~~~~~~~m~~~~~~~~ 353 (380)
T PRK13609 337 Q--DDMKLLQMKEAMKSLY 353 (380)
T ss_pred C--CHHHHHHHHHHHHHhC
Confidence 4 4778889988877643
No 82
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=27.73 E-value=2.2e+02 Score=34.14 Aligned_cols=40 Identities=10% Similarity=-0.028 Sum_probs=29.7
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
+....|..+...+.|.-.......++|||.+|| |||.++.
T Consensus 584 dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~-PVVat~~ 623 (694)
T PRK15179 584 RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGV-PVVTTLA 623 (694)
T ss_pred hHHHHHHhcCEEEeccccccchHHHHHHHHcCC-eEEEECC
Confidence 466777888777777544444566999999996 8888774
No 83
>PF00919 UPF0004: Uncharacterized protein family UPF0004; InterPro: IPR013848 The methylthiotransferase (MTTase) or miaB-like family is named after the (dimethylallyl)adenosine tRNA MTTase miaB protein, which catalyses a C-H to C-S bond conversion in the methylthiolation of tRNA. A related bacterial enzyme rimO performs a similar methylthiolation, but on a protein substrate. RimO acts on the ribosomal protein S12 and forms a separate MTTase subfamily. The miaB-subfamily includes mammalian CDK5 regulatory subunit-associated proteins and similar proteins in other eukaryotes. Two other subfamilies, yqeV and CDKAL1, are named after a Bacillus subtilis and a human protein, respectively. While yqeV-like proteins are found in bacteria, CDKAL1 subfamily members occur in eukaryotes and in archaebacteria. The likely MTTases from these 4 subfamilies contain an N-terminal MTTase domain, a central radical generating fold and a C-terminal TRAM domain (see PDOC50926 from PROSITEDOC). The core forms a radical SAM fold (or AdoMet radical), containing a cysteine motif CxxxCxxC that binds a [4Fe-4S] cluster [, , ]. A reducing equivalent from the [4Fe-4S]+ cluster is used to cleave S-adenosylmethionine (SAM) to generate methionine and a 5'-deoxyadenosyl radical. The latter is thought to produce a reactive substrate radical that is amenable to sulphur insertion [, ]. The N-terminal MTTase domain contains 3 cysteines that bind a second [4Fe-4S] cluster, in addition to the radical-generating [4Fe-4S] cluster, which could be involved in the thiolation reaction. The C-terminal TRAM domain is not shared with other radical SAM proteins outside the MTTase family. The TRAM domain can bind to RNA substrate and seems to be important for substrate recognition. The tertiary structure of the central radical SAM fold has six beta/alpha motifs resembling a three-quarter TIM barrel core (see PDOC00155 from PROSITEDOC) []. The N-terminal MTTase domain might form an additional [beta/alpha]2 TIM barrel unit []. ; GO: 0003824 catalytic activity, 0051539 4 iron, 4 sulfur cluster binding, 0009451 RNA modification
Probab=27.69 E-value=57 Score=29.06 Aligned_cols=31 Identities=19% Similarity=0.311 Sum_probs=22.8
Q ss_pred cchhhHHHHHHhhhcCcc-ccCCcCCceEEEEc
Q 007197 235 NQFAVDVIFNNRMKQYEC-LTNDSSIAAAIFVP 266 (613)
Q Consensus 235 ~qyalE~ifherLl~S~~-rT~DPeeAdlFyVP 266 (613)
+|+-.|.+. ..|.+..+ .|.+|++||+++|=
T Consensus 12 N~~Dse~i~-~~l~~~G~~~~~~~e~AD~iiiN 43 (98)
T PF00919_consen 12 NQYDSERIA-SILQAAGYEIVDDPEEADVIIIN 43 (98)
T ss_pred cHHHHHHHH-HHHHhcCCeeecccccCCEEEEE
Confidence 567778555 45666555 69999999999774
No 84
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=26.94 E-value=1.9e+02 Score=33.17 Aligned_cols=138 Identities=12% Similarity=0.018 Sum_probs=67.0
Q ss_pred CeeEEeccCC-CC-CCChhhHHHHHHHhhcCCCceeeeecCCCC--cC-C-----CchhHHhhcccC-eEEEccCCCCCC
Q 007197 388 KWLFSFAGAP-RP-GDPLSIRGQLMEQCRNSEVGKLLECDFGES--KC-H-----SPSSIMQMFQTS-IFCLQPQGDSYT 456 (613)
Q Consensus 388 ~~L~~FaG~~-~~-~~~~~IR~~L~~~~~~~~~~~~v~c~~g~~--~c-~-----~~~~y~~~m~~S-kFCL~P~GDs~t 456 (613)
.++++| |.. .. ..+....+.+++.++..+...++....... .. . .-....++|.+. .-+.+=.|..-
T Consensus 298 ~V~vS~-GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~~~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~- 375 (507)
T PHA03392 298 VVYVSF-GSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVEAINLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQ- 375 (507)
T ss_pred EEEEEC-CCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcCcccCCCceEEecCCCHHHHhcCCCCCEEEecCCcc-
Confidence 566666 443 22 234567788888887765433444321110 00 0 111335667543 23333344332
Q ss_pred cchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHccCCHHHHHHHHHHHhhhccee
Q 007197 457 RRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQISPEQIKEMRETVINLIPRV 535 (613)
Q Consensus 457 srRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~sIp~e~i~~Mr~~l~~v~~~f 535 (613)
++.||+.+|+ |+|+-+.. ..|+..--=+-....++.++..++... .|.+.|+.+-.+ .+.|++.+++.+.+
T Consensus 376 --s~~Eal~~Gv-P~v~iP~~-~DQ~~Na~rv~~~G~G~~l~~~~~t~~--~l~~ai~~vl~~--~~y~~~a~~ls~~~ 446 (507)
T PHA03392 376 --STDEAIDALV-PMVGLPMM-GDQFYNTNKYVELGIGRALDTVTVSAA--QLVLAIVDVIEN--PKYRKNLKELRHLI 446 (507)
T ss_pred --cHHHHHHcCC-CEEECCCC-ccHHHHHHHHHHcCcEEEeccCCcCHH--HHHHHHHHHhCC--HHHHHHHHHHHHHH
Confidence 3789999985 88876652 122111111335567777776655421 244444333111 34555666655553
No 85
>PLN02275 transferase, transferring glycosyl groups
Probab=26.82 E-value=1.6e+02 Score=31.68 Aligned_cols=77 Identities=12% Similarity=0.066 Sum_probs=46.7
Q ss_pred CeeEEeccCCCCCCChhhHHHHHHHhhcCCCceeeeecCCCCcCCCchhHHhhcccCeEEEccC----CCCCCcchHHHH
Q 007197 388 KWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCHSPSSIMQMFQTSIFCLQPQ----GDSYTRRSAFDS 463 (613)
Q Consensus 388 ~~L~~FaG~~~~~~~~~IR~~L~~~~~~~~~~~~v~c~~g~~~c~~~~~y~~~m~~SkFCL~P~----GDs~tsrRlfDA 463 (613)
.+-|.+.|. |..|+.|.++.++.+.....-. +. .....++.+.|+.+..|+.|. |.+. ...++||
T Consensus 261 ~i~l~ivG~------G~~~~~l~~~~~~~~l~~v~~~--~~--~~~~~~~~~~l~~aDv~v~~~~s~~~e~~-p~~llEA 329 (371)
T PLN02275 261 RLLFIITGK------GPQKAMYEEKISRLNLRHVAFR--TM--WLEAEDYPLLLGSADLGVSLHTSSSGLDL-PMKVVDM 329 (371)
T ss_pred CeEEEEEeC------CCCHHHHHHHHHHcCCCceEEE--cC--CCCHHHHHHHHHhCCEEEEeccccccccc-cHHHHHH
Confidence 477888884 2356666666654432111111 10 012457888899999988653 2233 3349999
Q ss_pred HhhCceeEEecCC
Q 007197 464 ILAGCIPVFFHPG 476 (613)
Q Consensus 464 I~aGCIPVIisD~ 476 (613)
|.+|| |||.++.
T Consensus 330 mA~G~-PVVa~~~ 341 (371)
T PLN02275 330 FGCGL-PVCAVSY 341 (371)
T ss_pred HHCCC-CEEEecC
Confidence 99997 8888764
No 86
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=26.82 E-value=5e+02 Score=28.83 Aligned_cols=149 Identities=11% Similarity=0.222 Sum_probs=82.7
Q ss_pred CCCccCCCCCcccchhhhhccccCCCeeEEeccCCCCCCChhhHHHHHHHhhcCCCceeeeecCC-CCcCC---------
Q 007197 363 YPTYFHPSKDAEVFDWQNRMRKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFG-ESKCH--------- 432 (613)
Q Consensus 363 ypt~fhP~kD~~vp~w~~~~~~~~R~~L~~FaG~~~~~~~~~IR~~L~~~~~~~~~~~~v~c~~g-~~~c~--------- 432 (613)
+...++...+.+++.| ....|+.+.+-.|+.... ..+=+.+++.|.+.+.-.++.- .+ ...+.
T Consensus 217 ~~~~~~~~~~~~~~~~----~~~d~~~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~-~~~~~~~~~~p~n~~v~ 289 (406)
T COG1819 217 YIGPLLGEAANELPYW----IPADRPIVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSL-GGARDTLVNVPDNVIVA 289 (406)
T ss_pred ccccccccccccCcch----hcCCCCeEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEec-cccccccccCCCceEEe
Confidence 3344555555556655 346788888888876532 2334455667776653223221 11 10111
Q ss_pred CchhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCC-----CCCcceEEEeecchhccccc
Q 007197 433 SPSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLP-----KNYSSYSVFIPEDDIRKRNV 507 (613)
Q Consensus 433 ~~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LP-----lDw~~fSV~I~e~dv~~~~~ 507 (613)
......+.+.+|.=-.+..|.+- +.+||.+| ||+|+-+.. ++-+ +.+.-+.+.++-+.+....
T Consensus 290 ~~~p~~~~l~~ad~vI~hGG~gt----t~eaL~~g-vP~vv~P~~------~DQ~~nA~rve~~G~G~~l~~~~l~~~~- 357 (406)
T COG1819 290 DYVPQLELLPRADAVIHHGGAGT----TSEALYAG-VPLVVIPDG------ADQPLNAERVEELGAGIALPFEELTEER- 357 (406)
T ss_pred cCCCHHHHhhhcCEEEecCCcch----HHHHHHcC-CCEEEecCC------cchhHHHHHHHHcCCceecCcccCCHHH-
Confidence 12356778889988888877653 66888887 788887653 4444 5566677777755544322
Q ss_pred cHHHHHcc-CCHHHHHHHHHHHhhh
Q 007197 508 SIEERLKQ-ISPEQIKEMRETVINL 531 (613)
Q Consensus 508 ~L~~iL~s-Ip~e~i~~Mr~~l~~v 531 (613)
|.+.++. +.++.+++-.+++.+.
T Consensus 358 -l~~av~~vL~~~~~~~~~~~~~~~ 381 (406)
T COG1819 358 -LRAAVNEVLADDSYRRAAERLAEE 381 (406)
T ss_pred -HHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3333332 2344444444444443
No 87
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=24.39 E-value=6.6e+02 Score=27.86 Aligned_cols=162 Identities=12% Similarity=0.186 Sum_probs=87.6
Q ss_pred cccCCCeeEEeccCCCCCCChhhHHHHHHHhhcCCC---ceeeeecCCCCcC-CCchhHHhhcccCeEEEccCCCCCCcc
Q 007197 383 RKLERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEV---GKLLECDFGESKC-HSPSSIMQMFQTSIFCLQPQGDSYTRR 458 (613)
Q Consensus 383 ~~~~R~~L~~FaG~~~~~~~~~IR~~L~~~~~~~~~---~~~v~c~~g~~~c-~~~~~y~~~m~~SkFCL~P~GDs~tsr 458 (613)
.-..|.-.++|+|+... +..|+.|++.-.+... ..++.-+...... .....-++...+-+|=+.--|.+++.+
T Consensus 153 pW~~K~p~afWRG~~~~---~~~R~~L~~~~~~~~~~~~a~i~~~d~~~~~~~~~~~~~l~~~~~yKYli~idG~~~S~R 229 (395)
T PF05686_consen 153 PWEDKKPKAFWRGSPTV---AETRQRLVRCSRSHPDLWDARITKQDWDKEYKPGFKHVPLEDQCKYKYLIYIDGNAWSGR 229 (395)
T ss_pred ChhhcccceEECCCcCC---CcchhHHHHHhccCCccceeeechhhhhhhccccccccCHHHHhhhheeecCCCceeehh
Confidence 34678888999998763 2379999876544321 1122211110000 011122344567788888999998765
Q ss_pred hHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeec-chhccccccHHHHHccC--CHHHHHHHHHHHhhhccee
Q 007197 459 SAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPE-DDIRKRNVSIEERLKQI--SPEQIKEMRETVINLIPRV 535 (613)
Q Consensus 459 RlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e-~dv~~~~~~L~~iL~sI--p~e~i~~Mr~~l~~v~~~f 535 (613)
+.=-|++|++.+.... .|.++=++.-.+|.-| |=|.. ++.. +|.+.++=. .+++.+++=++..+.++..
T Consensus 230 -lkylL~c~SvVl~~~~--~~~e~f~~~L~P~vHY-VPV~~~~d~s----dL~~~v~w~~~~~~~A~~IA~~g~~f~~~~ 301 (395)
T PF05686_consen 230 -LKYLLACNSVVLKVKS--PYYEFFYRALKPWVHY-VPVKRDDDLS----DLEEKVEWLNAHDDEAQRIAENGQRFAREY 301 (395)
T ss_pred -HHHHHcCCceEEEeCC--cHHHHHHhhhcccccE-EEeccccchh----hHHHHhhhcccChHHHHHHHHHHHHHHHHH
Confidence 7777888888766643 3655433333677777 44544 2333 255554322 3556666666665544332
Q ss_pred eeeCCCCCcCCcCCHHHHHHHHHHHHHHHh
Q 007197 536 IYADPRSKLATLKDSFDVAVQSIIDRVTRL 565 (613)
Q Consensus 536 ~Y~~p~~~~~~~~DAFd~~l~~L~~Rv~~i 565 (613)
+= .+++.--|..|+....++
T Consensus 302 L~----------~~~~~~Y~~~LL~eYa~l 321 (395)
T PF05686_consen 302 LT----------MEDVYCYWRRLLLEYAKL 321 (395)
T ss_pred hh----------hhHHHHHHHHHHHHHHHH
Confidence 11 234444455555555554
No 88
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=24.38 E-value=1.1e+02 Score=32.55 Aligned_cols=35 Identities=11% Similarity=0.123 Sum_probs=27.1
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
+....|+.+..++++.|. ...||+.+|| |||+..+
T Consensus 254 ~~~~~~~~aDl~v~~sG~-----~~lEa~a~G~-PvI~~~~ 288 (380)
T PRK00025 254 QKREAMAAADAALAASGT-----VTLELALLKV-PMVVGYK 288 (380)
T ss_pred cHHHHHHhCCEEEECccH-----HHHHHHHhCC-CEEEEEc
Confidence 467888999999998753 2559999997 8887654
No 89
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=22.05 E-value=83 Score=36.59 Aligned_cols=40 Identities=23% Similarity=0.505 Sum_probs=31.4
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
..++.++|++|+. ++=-|.-+-.+.=+|||..|| |+|.+.
T Consensus 332 ~~ef~~lL~~akv-fiGlGfP~EgPaPlEAia~G~--vFlNp~ 371 (559)
T PF15024_consen 332 GDEFQQLLRKAKV-FIGLGFPYEGPAPLEAIANGC--VFLNPR 371 (559)
T ss_pred HHHHHHHHHhhhE-eeecCCCCCCCChHHHHHcCC--cccccc
Confidence 4689999999997 444577677777899999999 677665
No 90
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=21.76 E-value=1.7e+02 Score=35.62 Aligned_cols=90 Identities=9% Similarity=0.053 Sum_probs=52.0
Q ss_pred eEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHcc--CCHHHHH
Q 007197 445 IFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQ--ISPEQIK 522 (613)
Q Consensus 445 kFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~s--Ip~e~i~ 522 (613)
..+++|.=..+--..+.|||.+|| |||.++.-. +-+. +.-..-.+.|+..|...-.-.|.++|.. -.++.+.
T Consensus 645 dVfV~PS~~EpFGLvvLEAMAcGl-PVVAT~~GG----~~Ei-V~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~ 718 (784)
T TIGR02470 645 GIFVQPALYEAFGLTVLEAMTCGL-PTFATRFGG----PLEI-IQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQ 718 (784)
T ss_pred cEEEECCcccCCCHHHHHHHHcCC-CEEEcCCCC----HHHH-hcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 455667655555566999999998 556665311 0111 3334456667766654300023333321 2577888
Q ss_pred HHHHHH-hhhcceeeeeCC
Q 007197 523 EMRETV-INLIPRVIYADP 540 (613)
Q Consensus 523 ~Mr~~l-~~v~~~f~Y~~p 540 (613)
+|.++. .++..+|.|..-
T Consensus 719 ~ms~~a~~rV~~~FSW~~~ 737 (784)
T TIGR02470 719 KISQGGLQRIYEKYTWKIY 737 (784)
T ss_pred HHHHHHHHHHHHhCCHHHH
Confidence 888885 456788888553
No 91
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=21.01 E-value=1.9e+02 Score=32.70 Aligned_cols=87 Identities=16% Similarity=0.193 Sum_probs=52.0
Q ss_pred chhHHhhcccCeEEEccC-CCCCCcchHHHHHhhCcee----EEecCCCccccccccCCCCCcceEEEeecchhcccccc
Q 007197 434 PSSIMQMFQTSIFCLQPQ-GDSYTRRSAFDSILAGCIP----VFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVS 508 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~-GDs~tsrRlfDAI~aGCIP----VIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~ 508 (613)
..+..+.|+.+.-|+.|. .++.+-- ..|||.+|+ | ||+++...- .-++ . -++.|+..|...-.-.
T Consensus 346 ~~el~aly~aaDv~vv~S~~EG~~Lv-~lEamA~g~-P~~g~vVlS~~~G~---~~~l--~---~gllVnP~d~~~lA~a 415 (456)
T TIGR02400 346 REELMALYRAADVGLVTPLRDGMNLV-AKEYVAAQD-PKDGVLILSEFAGA---AQEL--N---GALLVNPYDIDGMADA 415 (456)
T ss_pred HHHHHHHHHhCcEEEECccccccCcc-HHHHHHhcC-CCCceEEEeCCCCC---hHHh--C---CcEEECCCCHHHHHHH
Confidence 457888899999888865 4444443 889999997 8 899874211 1122 2 3677777666541112
Q ss_pred HHHHHccCCHHHHHHHHHHHhhh
Q 007197 509 IEERLKQISPEQIKEMRETVINL 531 (613)
Q Consensus 509 L~~iL~sIp~e~i~~Mr~~l~~v 531 (613)
|.++|. .+.++..++.+++++.
T Consensus 416 I~~aL~-~~~~er~~r~~~~~~~ 437 (456)
T TIGR02400 416 IARALT-MPLEEREERHRAMMDK 437 (456)
T ss_pred HHHHHc-CCHHHHHHHHHHHHHH
Confidence 333343 3555555555544443
Done!