Query 007197
Match_columns 613
No_of_seqs 237 out of 816
Neff 5.5
Searched_HMMs 13730
Date Mon Mar 25 19:38:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007197.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/007197hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2nzwa1 c.87.1.11 (A:1-349) Al 95.1 0.05 3.7E-06 55.0 11.0 83 385-476 177-267 (349)
2 d2iw1a1 c.87.1.8 (A:2-371) Lip 88.7 0.14 1E-05 48.2 4.1 94 435-535 261-354 (370)
3 d1rzua_ c.87.1.8 (A:) Glycogen 87.9 0.38 2.7E-05 48.7 7.1 92 435-537 357-461 (477)
4 d2bisa1 c.87.1.8 (A:1-437) Gly 87.0 0.13 9.3E-06 50.4 2.7 96 434-537 319-414 (437)
5 d2bfwa1 c.87.1.8 (A:218-413) G 76.3 1.5 0.00011 38.7 5.4 92 434-533 102-193 (196)
6 d2f9fa1 c.87.1.8 (A:2-167) Fir 73.5 1.1 8E-05 38.6 3.6 42 434-476 77-118 (166)
7 d1f0ka_ c.87.1.2 (A:) Peptidog 70.6 3.4 0.00025 38.3 6.8 89 436-531 241-331 (351)
8 d1pn3a_ c.87.1.5 (A:) TDP-epi- 60.1 8.1 0.00059 36.0 7.2 108 436-560 279-389 (391)
9 d1uqta_ c.87.1.6 (A:) Trehalos 34.9 21 0.0016 35.6 5.9 91 434-534 341-436 (456)
10 d1rrva_ c.87.1.5 (A:) TDP-vanc 30.5 27 0.0019 32.2 5.4 89 436-535 295-383 (401)
11 d2pq6a1 c.87.1.10 (A:8-480) (I 27.5 15 0.0011 34.9 3.0 92 436-535 355-449 (473)
12 d1xrda1 f.3.1.1 (A:1-52) Light 24.1 7.8 0.00057 28.0 0.0 24 28-51 13-36 (52)
No 1
>d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]}
Probab=95.06 E-value=0.05 Score=54.98 Aligned_cols=83 Identities=14% Similarity=0.237 Sum_probs=56.5
Q ss_pred cCCCeeEEeccCCCCCCChhhHHHHHHHhhcCCCceeeeecCCCCcCC-----CchhHHhhcccCeEEEccC---CCCCC
Q 007197 385 LERKWLFSFAGAPRPGDPLSIRGQLMEQCRNSEVGKLLECDFGESKCH-----SPSSIMQMFQTSIFCLQPQ---GDSYT 456 (613)
Q Consensus 385 ~~R~~L~~FaG~~~~~~~~~IR~~L~~~~~~~~~~~~v~c~~g~~~c~-----~~~~y~~~m~~SkFCL~P~---GDs~t 456 (613)
..|+.+.+|.-+- ....+|..+++++.... .+++. +.|. ...+-.+.|.+.+|+||.- -.++.
T Consensus 177 ~~K~kFcs~v~Sn---~~~~~R~~~~~~L~k~~---~Vd~~---G~~~nn~~~~~~~K~~~l~~ykF~l~~EN~~~~~Yv 247 (349)
T d2nzwa1 177 PLKRGFASFVASN---PNAPIRNAFYDALNSIE---PVTGG---GSVRNTLGYNVKNKNEFLSQYKFNLCFENTQGYGYV 247 (349)
T ss_dssp TTSSEEEEECCSC---CCCHHHHHHHHHHTTTS---CCEEC---SSTTCCSSSCCSCHHHHHTTEEEEEEECSSCCTTCC
T ss_pred cccCceEEEEEcC---CCCchHHHHHHHHhccC---eeccc---CccccCCCCchhhHHHHHhCCCeEEEECCcCCCCCc
Confidence 4566666665321 12468999999987764 23331 2231 2235567899999999974 33455
Q ss_pred cchHHHHHhhCceeEEecCC
Q 007197 457 RRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 457 srRlfDAI~aGCIPVIisD~ 476 (613)
+-.++||+++|||||..++.
T Consensus 248 TEKi~da~~~g~iPIy~G~~ 267 (349)
T d2nzwa1 248 TEKIIDAYFSHTIPIYWGSP 267 (349)
T ss_dssp CTHHHHHHHTTCEEEEESCT
T ss_pred chHHHHHHhCCeEEEEECCC
Confidence 66699999999999999975
No 2
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Probab=88.73 E-value=0.14 Score=48.15 Aligned_cols=94 Identities=14% Similarity=0.151 Sum_probs=55.4
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHc
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLK 514 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~ 514 (613)
.+..+.|+.+..++.|.=.......+.|||.+|| |||.+|..... ++-.|-..-.+..+..|...-.-.|.++|.
T Consensus 261 ~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~-PvI~s~~~g~~----e~i~~~~~G~l~~~~~d~~~la~~i~~ll~ 335 (370)
T d2iw1a1 261 NDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVCGYA----HYIADANCGTVIAEPFSQEQLNEVLRKALT 335 (370)
T ss_dssp SCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTSTTT----HHHHHHTCEEEECSSCCHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccceeeecccCCe-eEEEeCCCChH----HHhcCCCceEEEcCCCCHHHHHHHHHHHHc
Confidence 3577889999999998633333455999999996 88888753221 110121111233333444320002444444
Q ss_pred cCCHHHHHHHHHHHhhhccee
Q 007197 515 QISPEQIKEMRETVINLIPRV 535 (613)
Q Consensus 515 sIp~e~i~~Mr~~l~~v~~~f 535 (613)
.++...+|.++.++....+
T Consensus 336 --d~~~~~~~~~~ar~~~~~~ 354 (370)
T d2iw1a1 336 --QSPLRMAWAENARHYADTQ 354 (370)
T ss_dssp --CHHHHHHHHHHHHHHHHHS
T ss_pred --CHHHHHHHHHHHHHHHHHh
Confidence 5788889988887766553
No 3
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=87.94 E-value=0.38 Score=48.66 Aligned_cols=92 Identities=9% Similarity=0.073 Sum_probs=57.5
Q ss_pred hhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCC--------cceEEEeecchhcccc
Q 007197 435 SSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNY--------SSYSVFIPEDDIRKRN 506 (613)
Q Consensus 435 ~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw--------~~fSV~I~e~dv~~~~ 506 (613)
......|+.|.+++.|.=....-..+.|||.+|| |||.+|.-.. -++-.|. ..-.+.++..|...
T Consensus 357 ~~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~-PvVas~~GG~----~E~v~d~~~~~~~~~~~~G~l~~~~d~~~-- 429 (477)
T d1rzua_ 357 PLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTGGL----ADTVIDANHAALASKAATGVQFSPVTLDG-- 429 (477)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSHHH----HHHCCBCCHHHHHTTCCCBEEESSCSHHH--
T ss_pred hHHHHHHHhCccccCCccccCCCHHHHHHHHcCC-CEEEcCCCCC----cceeecCCccccccCCCceEEeCCCCHHH--
Confidence 3566788999999999877777777999999999 5555653111 1221222 12334566666654
Q ss_pred ccHHHHHcc-C----CHHHHHHHHHHHhhhcceeee
Q 007197 507 VSIEERLKQ-I----SPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 507 ~~L~~iL~s-I----p~e~i~~Mr~~l~~v~~~f~Y 537 (613)
|.+.|+. + .++.+.+|+++.. .++|.|
T Consensus 430 --la~ai~~~l~~~~~~~~~~~~~~~a~--~~~fsw 461 (477)
T d1rzua_ 430 --LKQAIRRTVRYYHDPKLWTQMQKLGM--KSDVSW 461 (477)
T ss_dssp --HHHHHHHHHHHHTCHHHHHHHHHHHH--TCCCBH
T ss_pred --HHHHHHHHHhhhCCHHHHHHHHHHHH--HhhCCH
Confidence 4444432 1 5788888887763 455665
No 4
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=86.95 E-value=0.13 Score=50.40 Aligned_cols=96 Identities=10% Similarity=0.128 Sum_probs=61.0
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHH
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERL 513 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL 513 (613)
...+...++.+.+.++|.-.......++|||.+|+ |||.+|.... -++ ++ .+..+.++..|+..=.-.|.++|
T Consensus 319 ~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~-Pvi~~~~g~~----~e~-i~-~~~G~~~~~~d~~~la~~i~~ll 391 (437)
T d2bisa1 319 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGGL----RDI-IT-NETGILVKAGDPGELANAILKAL 391 (437)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTC-EEEEESCTTH----HHH-CC-TTTCEEECTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhccccccccccccchHHHHHHHCCC-CEEEeCCCCc----HHh-EE-CCcEEEECCCCHHHHHHHHHHHH
Confidence 44678888999999988644445566999999997 8888875321 122 33 23456777666543000233444
Q ss_pred ccCCHHHHHHHHHHHhhhcceeee
Q 007197 514 KQISPEQIKEMRETVINLIPRVIY 537 (613)
Q Consensus 514 ~sIp~e~i~~Mr~~l~~v~~~f~Y 537 (613)
. ..++...+|.++..+....|.|
T Consensus 392 ~-~~~~~~~~~~~~~~~~~~~~s~ 414 (437)
T d2bisa1 392 E-LSRSDLSKFRENCKKRAMSFSW 414 (437)
T ss_dssp T-TTTSCTHHHHHHHHHHHHHSCH
T ss_pred h-CCHHHHHHHHHHHHHHHHhCCH
Confidence 3 2467788899988877655443
No 5
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=76.30 E-value=1.5 Score=38.67 Aligned_cols=92 Identities=11% Similarity=0.088 Sum_probs=57.4
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHH
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERL 513 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL 513 (613)
...+...|+.|...+.|.=.......++|||.+|| |||.++... ...-++- ...+.++..+...-.-.|.++|
T Consensus 102 ~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~-pvI~~~~~~-----~~e~i~~-~~g~~~~~~~~~~l~~~i~~~l 174 (196)
T d2bfwa1 102 REFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVGG-----LRDIITN-ETGILVKAGDPGELANAILKAL 174 (196)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-EEEEESCHH-----HHHHCCT-TTCEEECTTCHHHHHHHHHHHH
T ss_pred cccchhccccccccccccccccccccchhhhhcCc-eeeecCCCc-----cceeecC-CceeeECCCCHHHHHHHHHHHH
Confidence 45778899999999988755555677999999998 455565411 1111332 2345566655543000244434
Q ss_pred ccCCHHHHHHHHHHHhhhcc
Q 007197 514 KQISPEQIKEMRETVINLIP 533 (613)
Q Consensus 514 ~sIp~e~i~~Mr~~l~~v~~ 533 (613)
. ..++++.+|+++.++.+.
T Consensus 175 ~-~~~~~~~~~~~~a~~~a~ 193 (196)
T d2bfwa1 175 E-LSRSDLSKFRENCKKRAM 193 (196)
T ss_dssp H-CCHHHHHHHHHHHHHHHH
T ss_pred h-CCHHHHHHHHHHHHHHHH
Confidence 3 368899999998876543
No 6
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=73.50 E-value=1.1 Score=38.59 Aligned_cols=42 Identities=12% Similarity=0.170 Sum_probs=34.4
Q ss_pred chhHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCC
Q 007197 434 PSSIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPG 476 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~ 476 (613)
..++.+.|+.|.++++|.-.......++|||.+|| |||.++.
T Consensus 77 ~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~-pvi~s~~ 118 (166)
T d2f9fa1 77 EEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNE 118 (166)
T ss_dssp HHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESS
T ss_pred ccccccccccccccccccccccccccccccccccc-cceeecC
Confidence 35688899999999999877777778999999996 5566764
No 7
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=70.64 E-value=3.4 Score=38.35 Aligned_cols=89 Identities=18% Similarity=0.221 Sum_probs=59.8
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCc--cccccccCCCCCcceEEEeecchhccccccHHHHH
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSA--YTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERL 513 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~sa--y~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL 513 (613)
+..++|..+..|++-+|.+ .+.|++.+| +|+|+-+-.+ ..|.-=-.-+.=.-.++.++++++... .|.+.|
T Consensus 241 ~~~~lm~~adl~It~~G~~----T~~Eal~~g-~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e--~l~~~l 313 (351)
T d1f0ka_ 241 DMAAAYAWADVVVCRSGAL----TVSEIAAAG-LPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVD--AVANTL 313 (351)
T ss_dssp CHHHHHHHCSEEEECCCHH----HHHHHHHHT-CCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHH--HHHHHH
T ss_pred hHHHHHHhCchhhccccch----HHHHHHHhC-CceeeeecccCCchHHHHHHHHHHCCCEEEechhhCCHH--HHHHHH
Confidence 5678899999999977743 378999988 5887643210 012100000222246788888887421 388899
Q ss_pred ccCCHHHHHHHHHHHhhh
Q 007197 514 KQISPEQIKEMRETVINL 531 (613)
Q Consensus 514 ~sIp~e~i~~Mr~~l~~v 531 (613)
..+.++.+.+|+++.+.+
T Consensus 314 ~~l~~~~~~~~~~~~~~~ 331 (351)
T d1f0ka_ 314 AGWSRETLLTMAERARAA 331 (351)
T ss_dssp HTCCHHHHHHHHHHHHHT
T ss_pred HhhCHHHHHHHHHHHHcc
Confidence 999999999999998864
No 8
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=60.08 E-value=8.1 Score=35.96 Aligned_cols=108 Identities=9% Similarity=0.041 Sum_probs=59.6
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCc---cccccccCCCCCcceEEEeecchhccccccHHHH
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSA---YTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEER 512 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~sa---y~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~i 512 (613)
+..++|..+...++..|.+ .+.|||.+|+ |+|+.+... -.|.-+-.-+......|.++..++... .|.+.
T Consensus 279 p~~~ll~~a~~~v~hgG~~----t~~Eal~~G~-P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~--~l~~~ 351 (391)
T d1pn3a_ 279 NLQELFGRVAAAIHHDSAG----TTLLAMRAGI-PQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTID--SLSAA 351 (391)
T ss_dssp CHHHHHTTSSCEEEESCHH----HHHHHHHHTC-CEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHH--HHHHH
T ss_pred CHHHHHhhccEEEecCchH----HHHHHHHhCC-cEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCCCHH--HHHHH
Confidence 4567788888888887753 5889999996 777765310 012111111334456777777665311 14444
Q ss_pred HccCCHHHHHHHHHHHhhhcceeeeeCCCCCcCCcCCHHHHHHHHHHH
Q 007197 513 LKQISPEQIKEMRETVINLIPRVIYADPRSKLATLKDSFDVAVQSIID 560 (613)
Q Consensus 513 L~sIp~e~i~~Mr~~l~~v~~~f~Y~~p~~~~~~~~DAFd~~l~~L~~ 560 (613)
|+.+-++ ++|++.+++...+.. . +..+|.|.+.+.|.+
T Consensus 352 i~~~l~~---~~r~~a~~~a~~~~~---~----g~~~aa~~i~~~l~~ 389 (391)
T d1pn3a_ 352 LDTALAP---EIRARATTVADTIRA---D----GTTVAAQLLFDAVSL 389 (391)
T ss_dssp HHHHTST---THHHHHHHHGGGSCS---C----HHHHHHHHHHHHHHH
T ss_pred HHHHhCH---HHHHHHHHHHHHHHh---c----CHHHHHHHHHHHHHh
Confidence 4433222 356677777666531 1 124666666555543
No 9
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}
Probab=34.90 E-value=21 Score=35.59 Aligned_cols=91 Identities=13% Similarity=0.110 Sum_probs=53.6
Q ss_pred chhHHhhcccCeEEEccC-CCCCCcchHHHHHhhCc----eeEEecCCCccccccccCCCCCcceEEEeecchhcccccc
Q 007197 434 PSSIMQMFQTSIFCLQPQ-GDSYTRRSAFDSILAGC----IPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVS 508 (613)
Q Consensus 434 ~~~y~~~m~~SkFCL~P~-GDs~tsrRlfDAI~aGC----IPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~ 508 (613)
...+...++.+..|++|. -++.+-- ..|||++|- =+||+++...- +-. +. + ++.|+..|+..-.-.
T Consensus 341 ~~~l~a~~~~Adv~v~~s~~EG~~lv-~~Ea~a~~~p~~~g~lIlS~~~G~---~~~--l~--~-g~lVnP~d~~~~A~a 411 (456)
T d1uqta_ 341 RKLLMKIFRYSDVGLVTPLRDGMNLV-AKEYVAAQDPANPGVLVLSQFAGA---ANE--LT--S-ALIVNPYDRDEVAAA 411 (456)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCHH-HHHHHHHSCTTSCCEEEEETTBGG---GGT--CT--T-SEEECTTCHHHHHHH
T ss_pred HHHHhHHHhhhceeecCCccCCCCcH-HHHHHHhCCCCCCCcEEEeCCCCC---HHH--hC--C-eEEECcCCHHHHHHH
Confidence 346777888998888874 4444444 889999983 13899886311 111 21 2 567887776641112
Q ss_pred HHHHHccCCHHHHHHHHHHHhhhcce
Q 007197 509 IEERLKQISPEQIKEMRETVINLIPR 534 (613)
Q Consensus 509 L~~iL~sIp~e~i~~Mr~~l~~v~~~ 534 (613)
|.+.|. .|+++..+|.+++.+...+
T Consensus 412 i~~aL~-~~~~er~~~~~~~~~~v~~ 436 (456)
T d1uqta_ 412 LDRALT-MSLAERISRHAEMLDVIVK 436 (456)
T ss_dssp HHHHHT-CCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHc-CCHHHHHHHHHHHHHHHHH
Confidence 333333 3777777666666554433
No 10
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}
Probab=30.51 E-value=27 Score=32.24 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=51.9
Q ss_pred hHHhhcccCeEEEccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCCCCcceEEEeecchhccccccHHHHHcc
Q 007197 436 SIMQMFQTSIFCLQPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPKNYSSYSVFIPEDDIRKRNVSIEERLKQ 515 (613)
Q Consensus 436 ~y~~~m~~SkFCL~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPlDw~~fSV~I~e~dv~~~~~~L~~iL~s 515 (613)
...++|.+...+++=.|. ..+.|||.+| +|||+-+.. ..|.-+--=+......+.++..++... +|.+.|+.
T Consensus 295 p~~~ll~~~~~~I~hgG~----~t~~Eal~~G-vP~l~~P~~-~DQ~~na~~v~~~G~g~~l~~~~~~~~--~L~~ai~~ 366 (401)
T d1rrva_ 295 NFQALFRRVAAVIHHGSA----GTEHVATRAG-VPQLVIPRN-TDQPYFAGRVAALGIGVAHDGPTPTFE--SLSAALTT 366 (401)
T ss_dssp CHHHHGGGSSEEEECCCH----HHHHHHHHHT-CCEEECCCS-BTHHHHHHHHHHHTSEEECSSSCCCHH--HHHHHHHH
T ss_pred CcHHHhhhccEEEecCCc----hHHHHHHHhC-CCEEEeccc-ccHHHHHHHHHHCCCEEEcCcCCCCHH--HHHHHHHH
Confidence 467778887777764443 4588999988 599987642 222211111344567788877665321 25555555
Q ss_pred CCHHHHHHHHHHHhhhccee
Q 007197 516 ISPEQIKEMRETVINLIPRV 535 (613)
Q Consensus 516 Ip~e~i~~Mr~~l~~v~~~f 535 (613)
+-.. ++|++.+++...+
T Consensus 367 vl~~---~~r~~a~~~~~~~ 383 (401)
T d1rrva_ 367 VLAP---ETRARAEAVAGMV 383 (401)
T ss_dssp HTSH---HHHHHHHHHTTTC
T ss_pred HhCH---HHHHHHHHHHHHH
Confidence 4322 3666677766554
No 11
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=27.48 E-value=15 Score=34.86 Aligned_cols=92 Identities=15% Similarity=0.168 Sum_probs=47.6
Q ss_pred hHHhhcccCeEEE-ccCCCCCCcchHHHHHhhCceeEEecCCCccccccccCCC-CCcceEEEeecchhccccccHHHHH
Q 007197 436 SIMQMFQTSIFCL-QPQGDSYTRRSAFDSILAGCIPVFFHPGSAYTQYTWHLPK-NYSSYSVFIPEDDIRKRNVSIEERL 513 (613)
Q Consensus 436 ~y~~~m~~SkFCL-~P~GDs~tsrRlfDAI~aGCIPVIisD~say~qyp~~LPl-Dw~~fSV~I~e~dv~~~~~~L~~iL 513 (613)
.+..+|...+--+ +=.|. ..++.|||.+| ||.|+-+- ...|+.+--=+ ++-...|.++. ++... +|.+.|
T Consensus 355 Pq~~lL~hp~~~~fItHGG---~~s~~Eal~~G-VP~lv~P~-~~DQ~~na~rv~~~~G~G~~l~~-~~t~~--~l~~ai 426 (473)
T d2pq6a1 355 PQDKVLNHPSIGGFLTHCG---WNSTTESICAG-VPMLCWPF-FADQPTDCRFICNEWEIGMEIDT-NVKRE--ELAKLI 426 (473)
T ss_dssp CHHHHHTSTTEEEEEECCC---HHHHHHHHHHT-CCEEECCC-STTHHHHHHHHHHTSCCEEECCS-SCCHH--HHHHHH
T ss_pred CHHHHhcCCcCcEEEecCC---ccHHHHHHHcC-CCEEeccc-hhhhHHHHHHHHHHcCeEEeeCC-CcCHH--HHHHHH
Confidence 3455665555433 33443 33589999999 58777664 23343332213 55566777662 33211 122222
Q ss_pred ccC-CHHHHHHHHHHHhhhccee
Q 007197 514 KQI-SPEQIKEMRETVINLIPRV 535 (613)
Q Consensus 514 ~sI-p~e~i~~Mr~~l~~v~~~f 535 (613)
+.+ .+++.+++|++..++...+
T Consensus 427 ~~vl~d~~~~~~r~~a~~l~~~~ 449 (473)
T d2pq6a1 427 NEVIAGDKGKKMKQKAMELKKKA 449 (473)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCChHHHHHHHHHHHHHHH
Confidence 222 3444566777776666543
No 12
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=24.05 E-value=7.8 Score=28.00 Aligned_cols=24 Identities=46% Similarity=0.830 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHHHhheeeecCC
Q 007197 28 FLVTLSAFFWILLLYFHFIVLGTN 51 (613)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~ 51 (613)
-|+++.+|..+|.+-.||+.|+++
T Consensus 13 ~lva~~~fL~~LAl~IHfiLLSt~ 36 (52)
T d1xrda1 13 ALVGLATFLFVLALLIHFILLSTE 36 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhccC
Confidence 378899999999999999998865
Done!