BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007199
(613 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 60/87 (68%)
Query: 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIV 530
+ LVV K + GS+GTVV +G+++GR VAVKR++ D+AL EI+ L SD HPN++
Sbjct: 13 LKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVI 72
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLI 557
R+Y E+ F+Y++LE C +L DL+
Sbjct: 73 RYYCSETTDRFLYIALELCNLNLQDLV 99
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 60/87 (68%)
Query: 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIV 530
+ LVV K + GS+GTVV +G+++GR VAVKR++ D+AL EI+ L SD HPN++
Sbjct: 13 LKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVI 72
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLI 557
R+Y E+ F+Y++LE C +L DL+
Sbjct: 73 RYYCSETTDRFLYIALELCNLNLQDLV 99
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 60/87 (68%)
Query: 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIV 530
+ LVV K + GS+GTVV +G+++GR VAVKR++ D+AL EI+ L SD HPN++
Sbjct: 31 LKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVI 90
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLI 557
R+Y E+ F+Y++LE C +L DL+
Sbjct: 91 RYYCSETTDRFLYIALELCNLNLQDLV 117
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 60/87 (68%)
Query: 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIV 530
+ LVV K + GS+GTVV +G+++GR VAVKR++ D+AL EI+ L SD HPN++
Sbjct: 31 LKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVI 90
Query: 531 RWYGVESDQDFVYLSLERCTCSLNDLI 557
R+Y E+ F+Y++LE C +L DL+
Sbjct: 91 RYYCSETTDRFLYIALELCNLNLQDLV 117
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 471 IGKLVVFNKEI-AKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNI 529
+GK+ K++ G+ GT+V G ++ R VAVKR++ A +E+Q L SD+HPN+
Sbjct: 21 VGKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNV 80
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLI 557
+R++ E D+ F Y+++E C +L + +
Sbjct: 81 IRYFCTEKDRQFQYIAIELCAATLQEYV 108
>pdb|2HZ6|A Chain A, The Crystal Structure Of Human Ire1-Alpha Luminal Domain
Length = 369
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 81/210 (38%), Gaps = 35/210 (16%)
Query: 57 DGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMK 116
DG++H V + G I+W+ P+ Q + F D ++ SK +
Sbjct: 18 DGSLHAVSKRTGSIKWTLKED-PVL---QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT 73
Query: 117 KLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDE 176
KL + E ++ P S DG + +G + +++D+ +G
Sbjct: 74 KLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTG--------------------- 112
Query: 177 NKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYADFKAEF 236
+ + L + +L L+Y+ RT+Y + + E+ WN Y D+ A
Sbjct: 113 -------EKQQTLSSAFADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFDYAASL 165
Query: 237 RCQEVGKSFSGYHFNSGSELGMDLIGDVES 266
+V S HF S + G+ + D ES
Sbjct: 166 PEDDVDYKMS--HFVSNGD-GLVVTVDSES 192
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 444 LSHITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAV 502
+ H+ F+ T + DR G+R+ + KGS G V+L + G+ AV
Sbjct: 6 MDHLHATPGMFVQHSTAIFSDRYKGQRV---------LGKGSFGEVILCKDKITGQECAV 56
Query: 503 KRLVK------THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544
K + K T + L+E+Q L D HPNI++ Y D+ + YL
Sbjct: 57 KVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYL 103
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT----HHDVALKEIQ---NLIAS 523
I L +F +++ G+ G V L E RS ++R++KT V +++I+ ++ S
Sbjct: 20 IDDLFIFKRKLGSGAFGDVHL---VEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKS 76
Query: 524 DQHPNIVRWYGVESDQDFVYLSLERC 549
HPNI++ + V D +Y+ +E C
Sbjct: 77 LDHPNIIKIFEVFEDYHNMYIVMETC 102
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 446 HITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKR 504
H+ F+ T + DR G+R+ + KGS G V+L + G+ AVK
Sbjct: 31 HLHATPGMFVQHSTAIFSDRYKGQRV---------LGKGSFGEVILCKDKITGQECAVKV 81
Query: 505 LVK------THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544
+ K T + L+E+Q L D HPNI++ Y D+ + YL
Sbjct: 82 ISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYL 126
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 17/98 (17%)
Query: 454 FLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVK----- 507
F+ T + DR G+R+ + KGS G V+L + G+ AVK + K
Sbjct: 22 FVQHSTAIFSDRYKGQRV---------LGKGSFGEVILCKDKITGQECAVKVISKRQVKQ 72
Query: 508 -THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544
T + L+E+Q L D HPNI++ Y D+ + YL
Sbjct: 73 KTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYL 109
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 446 HITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKR 504
H+ F+ T + DR G+R+ + KGS G V+L + G+ AVK
Sbjct: 32 HLHATPGMFVQHSTAIFSDRYKGQRV---------LGKGSFGEVILCKDKITGQECAVKV 82
Query: 505 LVK------THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544
+ K T + L+E+Q L D HPNI++ Y D+ + YL
Sbjct: 83 ISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYL 127
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 12/99 (12%)
Query: 457 TFTDLIDDRVDGRRIGKLVVFNKEIAKGS-NGTVVLEGNYEGRSVAVKRLVKTHHDVA-- 513
+ I ++++ ++G L + KGS G E + G VA+K + K A
Sbjct: 1 SLATCIGEKIEDFKVGNL------LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGM 54
Query: 514 LKEIQNLI---ASDQHPNIVRWYGVESDQDFVYLSLERC 549
++ +QN + +HP+I+ Y D ++VYL LE C
Sbjct: 55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMC 93
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 43/96 (44%), Gaps = 6/96 (6%)
Query: 470 RIGKLVVFNKEIAKGSNGTVVLEGNYE-GRSVAVK-RLVKTHHDVALKE--IQNLIASDQ 525
R+G ++I GS G + L N + VA+K VKT H L E I ++
Sbjct: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGT 63
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLS 561
VRW+GVE D + + + L SL DL S
Sbjct: 64 GIPNVRWFGVEGDYNVLVMDL--LGPSLEDLFNFCS 97
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 475 VVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHHDVALKEIQN---LIASDQ 525
+V +E+ +G+ G V L Y + VAVK L K A K+ Q L+ + Q
Sbjct: 17 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL-KDPTLAARKDFQREAELLTNLQ 75
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL 578
H +IV++YGV D D + + E Y+ G + L A D+ +L
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVFE----------YMKHGDLNKFLRAHGPDAMIL 118
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L KT + A E Q + + +HPNI+R
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 78 YGYFHDATRVYLILE 92
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L KT + A E Q + + +HPNI+R
Sbjct: 18 RPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 78 YGYFHDATRVYLILE 92
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 495 YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
+ G+ V L+K H + + S +P++V ++G D DFVY+ LE C
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEIC 124
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 495 YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
+ G+ V L+K H + + S +P++V ++G D DFVY+ LE C
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEIC 124
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 495 YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
+ G+ V L+K H + + S +P++V ++G D DFVY+ LE C
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEIC 124
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 495 YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
+ G+ V L+K H + + S +P++V ++G D DFVY+ LE C
Sbjct: 54 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEIC 108
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 475 VVFNKEIAKGSNGTVVLEGNYEGR-SVAVKRLVK--THHDVALKEIQNLIASDQHPNIVR 531
+ KE+ G G V L G ++G+ VAVK + + D +E Q ++ HP +V+
Sbjct: 10 ITLLKELGSGQFGVVKL-GKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS-HPKLVK 67
Query: 532 WYGVESDQDFVYLSLERCT--CSLNDL 556
+YGV S + +Y+ E + C LN L
Sbjct: 68 FYGVCSKEYPIYIVTEYISNGCLLNYL 94
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 475 VVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTHHDVALKEIQ---NLIASDQ 525
+V +E+ +G+ G V L Y + VAVK L K D A K+ L+ + Q
Sbjct: 15 IVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTL-KDASDNARKDFHREAELLTNLQ 73
Query: 526 HPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNE 580
H +IV++YGV + D + + E Y+ G + L A D+ L+ E
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFE----------YMKHGDLNKFLRAHGPDAVLMAE 118
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGR-SVAVKRLVKTH-HDV-ALKEIQNLIASDQHP 527
I + I +GS G V + R A K++ K DV K+ ++ S HP
Sbjct: 24 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 83
Query: 528 NIVRWYGVESDQDFVYLSLERCT 550
NI+R Y D +YL +E CT
Sbjct: 84 NIIRLYETFEDNTDIYLVMELCT 106
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 471 IGKLVVFNKEIAKGSNGTVVLEGNYEGR-SVAVKRLVKTH-HDV-ALKEIQNLIASDQHP 527
I + I +GS G V + R A K++ K DV K+ ++ S HP
Sbjct: 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHP 66
Query: 528 NIVRWYGVESDQDFVYLSLERCT 550
NI+R Y D +YL +E CT
Sbjct: 67 NIIRLYETFEDNTDIYLVMELCT 89
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 14/91 (15%)
Query: 462 IDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ--- 518
++D GR +GK N +A+ N +L A+K L K + A E Q
Sbjct: 7 LEDFEIGRPLGKGKFGNVYLAREKNSKFIL---------ALKVLFKAQLEKAGVEHQLRR 57
Query: 519 --NLIASDQHPNIVRWYGVESDQDFVYLSLE 547
+ + +HPNI+R YG D VYL LE
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILE 88
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 14/80 (17%)
Query: 481 IAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ-----------NLIASDQHPNI 529
I +GS G V + + R++ R +K + +++I L+ HPNI
Sbjct: 34 IGQGSYGVVRVAIENQTRAI---RAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNI 90
Query: 530 VRWYGVESDQDFVYLSLERC 549
R Y V D+ ++ L +E C
Sbjct: 91 ARLYEVYEDEQYICLVMELC 110
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 73 YGYFHDATRVYLILE 87
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 74 YGYFHDATRVYLILE 88
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 78 YGYFHDATRVYLILE 92
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 77 YGYFHDATRVYLILE 91
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 74 YGYFHDATRVYLILE 88
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 77 YGYFHDATRVYLILE 91
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 77 YGYFHDATRVYLILE 91
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 74 YGYFHDATRVYLILE 88
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 74 YGYFHDATRVYLILE 88
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 76 YGYFHDATRVYLILE 90
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 77 YGYFHDATRVYLILE 91
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 77 YGYFHDATRVYLILE 91
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 79 YGYFHDATRVYLILE 93
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 74 YGYFHDATRVYLILE 88
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 77 YGYFHDATRVYLILE 91
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 76 YGYFHDATRVYLILE 90
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 79 YGYFHDATRVYLILE 93
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 74 YGYFHDATRVYLILE 88
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 75 YGYFHDATRVYLILE 89
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 74 YGYFHDATRVYLILE 88
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 75 YGYFHDATRVYLILE 89
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 75 YGYFHDATRVYLILE 89
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 79 YGYFHDATRVYLILE 93
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 79 YGYFHDATRVYLILE 93
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 100 YGYFHDATRVYLILE 114
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 79 YGYFHDATRVYLILE 93
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 100 YGYFHDATRVYLILE 114
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 91 YGYFHDATRVYLILE 105
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTHHDVALKEIQ-----NLIASDQHPNIVRW 532
+ + KG G V L + + + A+K L K + A E Q + + +HPNI+R
Sbjct: 11 RPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 533 YGVESDQDFVYLSLE 547
YG D VYL LE
Sbjct: 71 YGYFHDATRVYLILE 85
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 495 YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
+ G+ V L+K H + ++ S H ++V ++G D DFV++ LE C
Sbjct: 45 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC 99
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 495 YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
+ G+ V L+K H + ++ S H ++V ++G D DFV++ LE C
Sbjct: 45 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC 99
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 495 YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
+ G+ V L+K H + ++ S H ++V ++G D DFV++ LE C
Sbjct: 49 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC 103
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 495 YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
+ G+ V L+K H + ++ S H ++V ++G D DFV++ LE C
Sbjct: 69 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC 123
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 495 YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
+ G+ V L+K H + ++ S H ++V ++G D DFV++ LE C
Sbjct: 67 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC 121
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%)
Query: 495 YEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549
+ G+ V L+K H + ++ S H ++V ++G D DFV++ LE C
Sbjct: 43 FAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELC 97
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 498 RSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547
++ AVK + K KEI L + HPNIV+ + V DQ +L +E
Sbjct: 37 QAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVME 86
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIV 530
+++ +G+ G V + +GR VA+KR+ D A++EI +L+ HPNIV
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREI-SLLKELHHPNIV 82
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIV 530
+++ +G+ G V + +GR VA+KR+ D A++EI +L+ HPNIV
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREI-SLLKELHHPNIV 82
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 471 IGKLVVFNK--EIAKGSNGTVVLEGN-YEGRSVAVKRL-VKTHHD----VALKEIQNLIA 522
+G + F K +I +G+ G V N G VA+K++ + T + A++EI +L+
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLK 60
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLI 557
HPNIV+ V ++ +YL E + L D +
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFM 95
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 462 IDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLI 521
IDD GR +GK N +A+ ++ +S K V+ H EIQ+ +
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLRREIEIQSHL 72
Query: 522 ASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLS--GSFEEQLNA 570
+HPNI+R Y D+ +YL LE +L L G F+EQ +A
Sbjct: 73 ---RHPNILRMYNYFHDRKRIYLMLE--FAPRGELYKELQKHGRFDEQRSA 118
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
Query: 462 IDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLI 521
IDD GR +GK N +A+ ++ +S K V+ H EIQ+ +
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVE-HQLRREIEIQSHL 71
Query: 522 ASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLS--GSFEEQLNA 570
+HPNI+R Y D+ +YL LE +L L G F+EQ +A
Sbjct: 72 ---RHPNILRMYNYFHDRKRIYLMLE--FAPRGELYKELQKHGRFDEQRSA 117
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Query: 471 IGKLVVFNK--EIAKGSNGTVVLEGN-YEGRSVAVKRL-VKTHHD----VALKEIQNLIA 522
+G + F K +I +G+ G V N G VA+K++ + T + A++EI +L+
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI-SLLK 59
Query: 523 SDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLI 557
HPNIV+ V ++ +YL E + L D +
Sbjct: 60 ELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFM 94
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 17/79 (21%)
Query: 489 VVLEGNYEGRSVAVKRLVKTHHDVALKEIQN-------LIASDQHPNIVRWYGVESDQD- 540
VV +G +VAVK+L D+ +E++ ++A QH N+V G SD D
Sbjct: 40 VVYKGYVNNTTVAVKKLAAMV-DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 98
Query: 541 ----FVYLS----LERCTC 551
+VY+ L+R +C
Sbjct: 99 LCLVYVYMPNGSLLDRLSC 117
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 17/79 (21%)
Query: 489 VVLEGNYEGRSVAVKRLVKTHHDVALKEIQN-------LIASDQHPNIVRWYGVESDQD- 540
VV +G +VAVK+L D+ +E++ ++A QH N+V G SD D
Sbjct: 46 VVYKGYVNNTTVAVKKLAAMV-DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 104
Query: 541 ----FVYLS----LERCTC 551
+VY+ L+R +C
Sbjct: 105 LCLVYVYMPNGSLLDRLSC 123
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 17/79 (21%)
Query: 489 VVLEGNYEGRSVAVKRLVKTHHDVALKEIQN-------LIASDQHPNIVRWYGVESDQD- 540
VV +G +VAVK+L D+ +E++ ++A QH N+V G SD D
Sbjct: 46 VVYKGYVNNTTVAVKKLAAMV-DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDD 104
Query: 541 ----FVYLS----LERCTC 551
+VY+ L+R +C
Sbjct: 105 LCLVYVYMPNGSLLDRLSC 123
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 501 AVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547
AVK + K+ D + +EI+ L+ QHPNI+ V D VYL E
Sbjct: 56 AVKVIDKSKRDPS-EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTE 101
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 501 AVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547
AVK + K+ D + +EI+ L+ QHPNI+ V D VYL E
Sbjct: 56 AVKVIDKSKRDPS-EEIEILLRYGQHPNIITLKDVYDDGKHVYLVTE 101
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV-ALKEIQNLIASDQHPNIVRWYGVES 537
K++ G G V + VAVK L V A E NL+ + QH +VR Y V +
Sbjct: 18 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 538 DQDFVYLSLE 547
++ +Y+ E
Sbjct: 78 KEEPIYIITE 87
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 480 EIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ---NLIASDQHPNIVRWYGVE 536
E+ G+ G V N E +A +++ T + L++ +++AS HPNIV+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 537 SDQDFVYLSLERCT 550
++ +++ +E C
Sbjct: 104 YYENNLWILIEFCA 117
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 440 ETDGLSHITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRS 499
+T G+ I + + FTD + + D +G V + I K +N
Sbjct: 2 QTVGVHSIVQQLHRNSIQFTDGYEVKED-IGVGSYSVCKRCIHKATN-----------ME 49
Query: 500 VAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547
AVK + K+ D +EI+ L+ QHPNI+ V D +VY+ E
Sbjct: 50 FAVKIIDKSKRD-PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 480 EIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ---NLIASDQHPNIVRWYGVE 536
E+ G+ G V N E +A +++ T + L++ +++AS HPNIV+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 537 SDQDFVYLSLERCT 550
++ +++ +E C
Sbjct: 104 YYENNLWILIEFCA 117
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 480 EIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQ---NLIASDQHPNIVRWYGVE 536
E+ G+ G V N E +A +++ T + L++ +++AS HPNIV+
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 537 SDQDFVYLSLERCT 550
++ +++ +E C
Sbjct: 104 YYENNLWILIEFCA 117
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 440 ETDGLSHITGNGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRS 499
+T G+ I + + FTD + + D +G V + I K +N
Sbjct: 2 QTVGVHSIVQQLHRNSIQFTDGYEVKED-IGVGSYSVCKRCIHKATN-----------XE 49
Query: 500 VAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547
AVK + K+ D +EI+ L+ QHPNI+ V D +VY+ E
Sbjct: 50 FAVKIIDKSKRD-PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSV-AVKRLVKTH-------HDVALK-EIQNLIASDQHPNI 529
+ + KG G V L + + + A+K L K+ H + + EIQ+ + +HPNI
Sbjct: 20 RPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL---RHPNI 76
Query: 530 VRWYGVESDQDFVYLSLERCTCSLNDLIYVLS--GSFEEQLNA 570
+R Y D+ +YL LE +L L G F+EQ +A
Sbjct: 77 LRMYNYFHDRKRIYLMLE--FAPRGELYKELQKHGRFDEQRSA 117
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 496 EGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547
+GR + ++ H+ EI +L+ S HPNI++ + V D+ + YL E
Sbjct: 76 KGRYSDDNKNIEKFHEEIYNEI-SLLKSLDHPNIIKLFDVFEDKKYFYLVTE 126
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 14/103 (13%)
Query: 450 NGEKFLLTFTDLIDDRVDGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH 509
+G +LT IDD GR +GK N +A+ + VA+K L K+
Sbjct: 10 SGTPDILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFI---------VALKVLFKSQ 60
Query: 510 HDVALKEIQ-----NLIASDQHPNIVRWYGVESDQDFVYLSLE 547
+ E Q + A HPNI+R Y D+ +YL LE
Sbjct: 61 IEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILE 103
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDV-ALKEIQNLIASDQHPNIVRWYGVES 537
K + G G V + VAVK L V A E NL+ + QH +VR Y V +
Sbjct: 19 KRLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 538 DQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL 578
++ +Y+ E Y+ GS + L + E LL
Sbjct: 79 REEPIYIITE----------YMAKGSLLDFLKSDEGGKVLL 109
>pdb|2W3Z|A Chain A, Structure Of A Streptococcus Mutans Ce4 Esterase
Length = 311
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 371 FIVLFIALCPIIGFLFYHSKQVKSKKQNEEHITKTGIPKKKKSRRPGYNRN 421
F +L I L ++G + +K ++ KQ++ HI + I KKK + +P N N
Sbjct: 25 FSLLIIGL--VLGVVLVQAKSMQ--KQHKNHIRSSRISKKKTTPKPNINPN 71
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 477 FNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKTHHDVA-----LKEIQNLIASDQHPNIV 530
K I KG+ V L + GR VAVK + KT + +E++ ++ HPNIV
Sbjct: 19 LQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVR-IMKILNHPNIV 77
Query: 531 RWYGVESDQDFVYLSLE 547
+ + V + +YL +E
Sbjct: 78 KLFEVIETEKTLYLVME 94
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 9/84 (10%)
Query: 473 KLVVFNKEIAKGSNGTVV------LEGNYEGRSVAVKRLVKTHHDVALKEIQ---NLIAS 523
K +V K + +G G VV L+G +VAVK L + L+++ N++
Sbjct: 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQ 82
Query: 524 DQHPNIVRWYGVESDQDFVYLSLE 547
HP++++ YG S + L +E
Sbjct: 83 VNHPHVIKLYGACSQDGPLLLIVE 106
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,233,448
Number of Sequences: 62578
Number of extensions: 789332
Number of successful extensions: 1986
Number of sequences better than 100.0: 98
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 1955
Number of HSP's gapped (non-prelim): 106
length of query: 613
length of database: 14,973,337
effective HSP length: 105
effective length of query: 508
effective length of database: 8,402,647
effective search space: 4268544676
effective search space used: 4268544676
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)