Query 007199
Match_columns 613
No_of_seqs 544 out of 3307
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 20:17:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007199.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007199hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1027 Serine/threonine prote 100.0 9.6E-38 2.1E-42 340.2 25.6 184 47-270 26-217 (903)
2 KOG0595 Serine/threonine-prote 99.9 2.7E-21 5.9E-26 197.8 14.8 115 475-596 12-136 (429)
3 PRK11138 outer membrane biogen 99.9 1.2E-20 2.5E-25 203.9 17.5 185 43-230 64-285 (394)
4 KOG0615 Serine/threonine prote 99.8 4.9E-20 1.1E-24 188.5 14.7 124 469-596 168-303 (475)
5 KOG1187 Serine/threonine prote 99.8 2.4E-19 5.1E-24 190.3 12.1 118 472-596 74-204 (361)
6 KOG0575 Polo-like serine/threo 99.8 6.1E-19 1.3E-23 188.7 14.8 123 473-602 18-155 (592)
7 TIGR03300 assembly_YfgL outer 99.8 4.2E-18 9.2E-23 182.8 17.5 184 42-232 59-272 (377)
8 PLN00113 leucine-rich repeat r 99.8 4.1E-18 8.9E-23 204.4 16.8 114 475-596 692-810 (968)
9 KOG0605 NDR and related serine 99.8 2.5E-18 5.4E-23 181.4 13.0 124 473-603 141-279 (550)
10 KOG0600 Cdc2-related protein k 99.8 1.1E-18 2.3E-23 182.8 9.6 124 473-602 117-255 (560)
11 PRK11138 outer membrane biogen 99.7 7.8E-18 1.7E-22 181.9 13.8 179 44-229 116-322 (394)
12 KOG0598 Ribosomal protein S6 k 99.7 6.9E-18 1.5E-22 171.5 12.4 124 473-603 25-163 (357)
13 KOG0597 Serine-threonine prote 99.7 1.6E-18 3.5E-23 182.9 7.0 122 474-609 3-133 (808)
14 KOG0581 Mitogen-activated prot 99.7 9.5E-18 2.1E-22 170.5 12.1 121 475-609 81-212 (364)
15 KOG0593 Predicted protein kina 99.7 1.9E-18 4.1E-23 170.6 6.2 122 475-609 4-134 (396)
16 KOG0659 Cdk activating kinase 99.7 5E-18 1.1E-22 165.0 8.7 123 474-602 3-138 (318)
17 KOG0192 Tyrosine kinase specif 99.7 2.1E-17 4.5E-22 174.7 13.6 116 475-596 43-170 (362)
18 KOG0592 3-phosphoinositide-dep 99.7 9.9E-18 2.2E-22 176.9 10.4 125 473-603 73-212 (604)
19 cd00216 PQQ_DH Dehydrogenases 99.7 3.7E-17 8E-22 181.1 15.5 184 41-231 54-276 (488)
20 KOG0661 MAPK related serine/th 99.7 1.2E-18 2.6E-23 181.2 2.8 126 473-610 10-144 (538)
21 TIGR03300 assembly_YfgL outer 99.7 6.6E-17 1.4E-21 173.5 15.7 179 43-228 100-306 (377)
22 KOG0611 Predicted serine/threo 99.7 4E-18 8.7E-23 173.4 5.6 123 473-602 53-190 (668)
23 cd00216 PQQ_DH Dehydrogenases 99.7 1.7E-16 3.6E-21 175.8 15.7 163 46-230 107-330 (488)
24 KOG1094 Discoidin domain recep 99.7 1.4E-16 3.1E-21 168.9 14.2 122 473-596 538-664 (807)
25 KOG0198 MEKK and related serin 99.7 6.8E-17 1.5E-21 166.2 11.5 122 475-609 19-150 (313)
26 KOG0582 Ste20-like serine/thre 99.7 2.7E-16 5.8E-21 162.7 15.2 125 473-602 26-163 (516)
27 KOG0663 Protein kinase PITSLRE 99.7 5.3E-17 1.2E-21 162.4 9.5 122 469-596 72-204 (419)
28 KOG0194 Protein tyrosine kinas 99.7 1.1E-16 2.4E-21 172.0 12.6 122 475-602 159-299 (474)
29 KOG0591 NIMA (never in mitosis 99.7 3.1E-18 6.7E-23 167.5 0.4 126 474-602 20-165 (375)
30 KOG0580 Serine/threonine prote 99.7 1.7E-17 3.7E-22 159.2 5.3 119 473-596 22-151 (281)
31 KOG4250 TANK binding protein k 99.7 2.9E-17 6.2E-22 178.4 7.3 134 475-612 15-166 (732)
32 KOG0583 Serine/threonine prote 99.7 3.4E-16 7.3E-21 166.6 15.3 123 473-601 17-156 (370)
33 KOG0197 Tyrosine kinases [Sign 99.7 6.7E-17 1.5E-21 171.3 9.8 123 475-602 208-340 (468)
34 KOG0610 Putative serine/threon 99.7 7.4E-17 1.6E-21 165.5 8.8 126 473-603 77-217 (459)
35 cd05629 STKc_NDR_like_fungal C 99.7 7.9E-16 1.7E-20 165.1 15.5 122 474-602 2-138 (377)
36 KOG2052 Activin A type IB rece 99.7 4.6E-16 1E-20 160.9 12.8 130 467-604 205-355 (513)
37 KOG1026 Nerve growth factor re 99.7 3.3E-16 7.1E-21 173.9 12.3 122 474-596 487-630 (774)
38 cd05628 STKc_NDR1 Catalytic do 99.7 1.1E-15 2.4E-20 163.2 15.9 123 474-603 2-139 (363)
39 KOG0667 Dual-specificity tyros 99.7 4.6E-16 9.9E-21 168.5 12.9 127 473-610 186-323 (586)
40 cd05626 STKc_LATS2 Catalytic d 99.7 1.2E-15 2.6E-20 164.0 15.8 122 474-602 2-138 (381)
41 cd05625 STKc_LATS1 Catalytic d 99.7 1.2E-15 2.6E-20 163.9 15.6 122 474-602 2-138 (382)
42 KOG0658 Glycogen synthase kina 99.7 2.6E-16 5.7E-21 159.8 9.6 123 472-596 23-152 (364)
43 cd05599 STKc_NDR_like Catalyti 99.7 1.3E-15 2.8E-20 162.4 15.6 122 474-602 2-138 (364)
44 cd05598 STKc_LATS Catalytic do 99.6 1.8E-15 3.8E-20 162.3 16.0 122 474-602 2-138 (376)
45 KOG0585 Ca2+/calmodulin-depend 99.6 3.4E-16 7.5E-21 162.8 10.0 124 472-609 96-243 (576)
46 PTZ00263 protein kinase A cata 99.6 2.3E-15 5E-20 158.5 16.1 122 474-602 19-155 (329)
47 TIGR03074 PQQ_membr_DH membran 99.6 4.3E-15 9.3E-20 169.9 19.2 180 44-231 190-434 (764)
48 cd07871 STKc_PCTAIRE3 Catalyti 99.6 2.4E-15 5.2E-20 155.1 15.6 123 474-602 6-140 (288)
49 cd05631 STKc_GRK4 Catalytic do 99.6 2.4E-15 5.2E-20 154.8 15.2 117 475-596 2-129 (285)
50 KOG0616 cAMP-dependent protein 99.6 9.5E-16 2.1E-20 151.4 11.1 124 473-603 44-182 (355)
51 KOG0193 Serine/threonine prote 99.6 1.8E-16 4E-21 169.3 6.2 125 473-603 392-526 (678)
52 KOG0574 STE20-like serine/thre 99.6 3.9E-17 8.5E-22 160.7 1.0 124 475-604 35-168 (502)
53 TIGR03075 PQQ_enz_alc_DH PQQ-d 99.6 3.6E-15 7.9E-20 165.9 16.7 186 42-233 63-293 (527)
54 KOG0032 Ca2+/calmodulin-depend 99.6 1.9E-15 4.1E-20 161.0 13.8 121 469-596 31-162 (382)
55 cd07869 STKc_PFTAIRE1 Catalyti 99.6 5.1E-15 1.1E-19 153.7 16.0 118 473-596 5-130 (303)
56 PF13360 PQQ_2: PQQ-like domai 99.6 5.1E-15 1.1E-19 147.9 15.2 112 47-165 35-152 (238)
57 cd05600 STKc_Sid2p_Dbf2p Catal 99.6 4.3E-15 9.3E-20 156.6 15.4 122 474-602 2-138 (333)
58 KOG3653 Transforming growth fa 99.6 9.6E-16 2.1E-20 159.6 10.0 131 475-610 212-350 (534)
59 cd05612 STKc_PRKX_like Catalyt 99.6 2E-15 4.3E-20 156.0 12.3 122 474-602 2-138 (291)
60 KOG0578 p21-activated serine/t 99.6 5.3E-16 1.1E-20 165.1 7.9 123 473-603 273-407 (550)
61 KOG4236 Serine/threonine prote 99.6 1.9E-15 4.2E-20 158.3 11.7 114 478-596 569-691 (888)
62 cd05596 STKc_ROCK Catalytic do 99.6 5.3E-15 1.2E-19 158.4 15.5 122 473-602 43-179 (370)
63 cd05627 STKc_NDR2 Catalytic do 99.6 6.7E-15 1.5E-19 156.9 16.1 122 474-602 2-138 (360)
64 KOG0694 Serine/threonine prote 99.6 1.4E-15 3E-20 165.0 10.7 125 473-604 368-507 (694)
65 cd05597 STKc_DMPK_like Catalyt 99.6 6.7E-15 1.4E-19 155.1 15.8 124 474-603 2-140 (331)
66 PTZ00036 glycogen synthase kin 99.6 1E-14 2.2E-19 159.9 17.7 120 473-596 66-197 (440)
67 cd05096 PTKc_DDR1 Catalytic do 99.6 4.8E-15 1E-19 153.9 14.5 122 474-596 6-165 (304)
68 cd05064 PTKc_EphR_A10 Catalyti 99.6 4.6E-15 9.9E-20 151.0 13.9 117 474-596 6-134 (266)
69 cd05621 STKc_ROCK2 Catalytic d 99.6 6.1E-15 1.3E-19 158.0 15.5 122 473-602 43-179 (370)
70 cd05571 STKc_PKB Catalytic dom 99.6 4.9E-15 1.1E-19 155.5 14.5 117 479-602 1-132 (323)
71 KOG0196 Tyrosine kinase, EPH ( 99.6 2.6E-15 5.7E-20 164.0 12.3 127 473-602 629-768 (996)
72 PTZ00426 cAMP-dependent protei 99.6 8.6E-15 1.9E-19 155.0 16.1 116 474-596 31-158 (340)
73 cd05102 PTKc_VEGFR3 Catalytic 99.6 2.5E-15 5.3E-20 158.6 11.8 88 473-560 7-106 (338)
74 KOG0588 Serine/threonine prote 99.6 1.1E-15 2.4E-20 164.6 9.2 115 475-596 14-139 (786)
75 cd05595 STKc_PKB_beta Catalyti 99.6 5.8E-15 1.3E-19 155.1 14.4 117 479-602 1-132 (323)
76 KOG0594 Protein kinase PCTAIRE 99.6 2E-15 4.3E-20 153.4 10.3 119 475-596 13-147 (323)
77 cd05624 STKc_MRCK_beta Catalyt 99.6 1E-14 2.2E-19 153.8 16.1 123 474-602 2-139 (331)
78 cd05601 STKc_CRIK Catalytic do 99.6 1E-14 2.2E-19 153.5 15.6 123 474-602 2-139 (330)
79 cd05573 STKc_ROCK_NDR_like Cat 99.6 6.3E-15 1.4E-19 156.1 14.0 122 474-602 2-138 (350)
80 PF13360 PQQ_2: PQQ-like domai 99.6 1E-14 2.2E-19 145.7 14.7 151 56-231 1-152 (238)
81 cd05593 STKc_PKB_gamma Catalyt 99.6 9.5E-15 2.1E-19 153.8 14.7 111 479-596 1-122 (328)
82 KOG0577 Serine/threonine prote 99.6 3.2E-16 6.8E-21 166.2 3.3 124 473-602 26-163 (948)
83 cd07848 STKc_CDKL5 Catalytic d 99.6 6.6E-15 1.4E-19 151.2 13.1 117 474-596 2-127 (287)
84 KOG1989 ARK protein kinase fam 99.6 7.6E-15 1.6E-19 163.7 14.3 124 475-602 39-183 (738)
85 cd05585 STKc_YPK1_like Catalyt 99.6 9.7E-15 2.1E-19 152.5 14.0 115 481-602 1-130 (312)
86 KOG0586 Serine/threonine prote 99.6 5.9E-15 1.3E-19 158.5 12.3 117 473-596 56-182 (596)
87 cd07859 STKc_TDY_MAPK_plant Ca 99.6 1.3E-14 2.8E-19 152.7 14.8 121 475-602 2-140 (338)
88 cd05622 STKc_ROCK1 Catalytic d 99.6 1.5E-14 3.3E-19 154.9 15.6 122 473-602 43-179 (371)
89 cd05592 STKc_nPKC_theta_delta 99.6 1.5E-14 3.2E-19 151.5 14.8 118 479-602 1-133 (316)
90 cd07872 STKc_PCTAIRE2 Catalyti 99.6 2.2E-14 4.7E-19 149.4 15.9 117 474-596 7-131 (309)
91 cd05614 STKc_MSK2_N N-terminal 99.6 2.2E-14 4.7E-19 151.1 16.0 122 475-602 2-142 (332)
92 cd05588 STKc_aPKC Catalytic do 99.6 1.6E-14 3.5E-19 152.1 15.0 112 479-596 1-123 (329)
93 KOG4717 Serine/threonine prote 99.6 3E-15 6.5E-20 156.6 9.1 125 466-596 11-145 (864)
94 cd05605 STKc_GRK4_like Catalyt 99.6 2E-14 4.3E-19 148.0 15.3 117 475-596 2-129 (285)
95 cd05590 STKc_nPKC_eta Catalyti 99.6 1.5E-14 3.2E-19 151.7 14.5 118 479-602 1-133 (320)
96 cd05591 STKc_nPKC_epsilon Cata 99.6 1.4E-14 3.1E-19 151.8 14.1 118 479-602 1-133 (321)
97 cd05623 STKc_MRCK_alpha Cataly 99.6 2.6E-14 5.7E-19 150.6 16.0 117 474-596 2-129 (332)
98 cd05618 STKc_aPKC_iota Catalyt 99.6 1.9E-14 4E-19 151.7 14.8 118 479-602 1-133 (329)
99 cd05104 PTKc_Kit Catalytic dom 99.6 7.6E-15 1.6E-19 157.5 11.9 88 473-560 35-133 (375)
100 cd05594 STKc_PKB_alpha Catalyt 99.6 2E-14 4.3E-19 151.0 14.8 111 479-596 1-123 (325)
101 cd05620 STKc_nPKC_delta Cataly 99.6 2.1E-14 4.5E-19 150.4 14.9 118 479-602 1-133 (316)
102 cd05582 STKc_RSK_N N-terminal 99.6 2.1E-14 4.5E-19 150.3 14.8 117 479-602 2-135 (318)
103 cd05575 STKc_SGK Catalytic dom 99.6 2E-14 4.4E-19 150.8 14.8 118 479-602 1-133 (323)
104 cd05604 STKc_SGK3 Catalytic do 99.6 1.9E-14 4.2E-19 151.1 14.6 118 479-602 1-133 (325)
105 cd05615 STKc_cPKC_alpha Cataly 99.6 2.3E-14 5.1E-19 150.5 15.2 122 475-602 2-138 (323)
106 cd05114 PTKc_Tec_Rlk Catalytic 99.6 2.1E-14 4.6E-19 144.9 14.4 116 475-596 6-127 (256)
107 cd05587 STKc_cPKC Catalytic do 99.6 3.1E-14 6.7E-19 149.5 15.9 122 475-602 2-138 (324)
108 cd05616 STKc_cPKC_beta Catalyt 99.6 3.2E-14 6.9E-19 149.3 15.8 122 475-602 2-138 (323)
109 cd05619 STKc_nPKC_theta Cataly 99.6 2.6E-14 5.7E-19 149.7 15.2 118 479-602 1-133 (316)
110 cd05603 STKc_SGK2 Catalytic do 99.6 2.3E-14 5E-19 150.2 14.7 118 479-602 1-133 (321)
111 cd05584 STKc_p70S6K Catalytic 99.6 2.6E-14 5.6E-19 150.1 14.4 117 479-602 2-137 (323)
112 COG1520 FOG: WD40-like repeat 99.6 2.5E-14 5.4E-19 153.3 14.6 159 44-230 64-228 (370)
113 PHA03212 serine/threonine kina 99.6 2.5E-14 5.4E-19 154.4 14.6 114 473-596 92-209 (391)
114 cd07853 STKc_NLK Catalytic dom 99.6 1.1E-14 2.3E-19 156.0 11.6 115 475-596 2-130 (372)
115 KOG1152 Signal transduction se 99.6 4.2E-15 9.2E-20 157.7 7.9 124 475-602 563-707 (772)
116 cd07861 STKc_CDK1_euk Catalyti 99.6 3.7E-14 8E-19 145.3 14.8 118 475-596 2-128 (285)
117 PTZ00267 NIMA-related protein 99.6 5.3E-14 1.2E-18 155.9 16.8 120 474-596 68-196 (478)
118 cd07873 STKc_PCTAIRE1 Catalyti 99.6 5.4E-14 1.2E-18 145.8 15.9 123 474-602 7-141 (301)
119 cd05610 STKc_MASTL Catalytic d 99.6 3.3E-14 7.2E-19 163.5 15.6 116 474-596 5-131 (669)
120 cd08227 PK_STRAD_alpha Pseudok 99.6 2.2E-14 4.9E-19 150.7 13.1 115 477-596 2-128 (327)
121 KOG0589 Serine/threonine prote 99.6 5.6E-15 1.2E-19 156.2 8.4 124 474-602 5-143 (426)
122 cd05589 STKc_PKN Catalytic dom 99.6 4.8E-14 1E-18 148.0 15.6 121 475-602 1-138 (324)
123 cd06649 PKc_MEK2 Catalytic dom 99.6 4.4E-14 9.6E-19 148.8 15.2 117 473-596 5-131 (331)
124 cd06650 PKc_MEK1 Catalytic dom 99.6 3.7E-14 8.1E-19 149.6 14.6 117 473-596 5-131 (333)
125 KOG0033 Ca2+/calmodulin-depend 99.6 2E-16 4.3E-21 152.1 -2.6 123 470-596 8-137 (355)
126 cd05602 STKc_SGK1 Catalytic do 99.6 4.4E-14 9.6E-19 148.4 14.8 118 479-602 1-133 (325)
127 cd05617 STKc_aPKC_zeta Catalyt 99.6 4.4E-14 9.6E-19 148.6 14.8 118 479-602 1-133 (327)
128 cd05072 PTKc_Lyn Catalytic dom 99.6 4.5E-14 9.8E-19 142.8 14.3 119 473-596 6-130 (261)
129 PHA03211 serine/threonine kina 99.6 3.7E-14 8.1E-19 155.7 14.5 116 472-596 168-287 (461)
130 KOG0662 Cyclin-dependent kinas 99.6 4.9E-15 1.1E-19 136.4 6.2 122 475-602 4-138 (292)
131 cd07844 STKc_PCTAIRE_like Cata 99.5 8E-14 1.7E-18 143.5 16.1 124 473-602 5-140 (291)
132 cd05106 PTKc_CSF-1R Catalytic 99.5 2.1E-14 4.5E-19 154.1 12.1 88 473-560 38-136 (374)
133 cd05108 PTKc_EGFR Catalytic do 99.5 2.9E-14 6.3E-19 149.0 12.9 116 474-596 8-136 (316)
134 cd05090 PTKc_Ror1 Catalytic do 99.5 3.5E-14 7.7E-19 145.6 13.2 121 475-596 7-151 (283)
135 cd06617 PKc_MKK3_6 Catalytic d 99.5 6.4E-14 1.4E-18 143.4 14.9 121 474-596 2-131 (283)
136 cd05570 STKc_PKC Catalytic dom 99.5 5.2E-14 1.1E-18 147.5 14.5 118 479-602 1-133 (318)
137 cd05608 STKc_GRK1 Catalytic do 99.5 4.6E-14 1E-18 144.9 13.8 113 481-596 1-124 (280)
138 PF07714 Pkinase_Tyr: Protein 99.5 6.2E-14 1.3E-18 142.3 14.5 116 476-596 2-130 (259)
139 KOG0587 Traf2- and Nck-interac 99.5 6.1E-14 1.3E-18 155.6 15.2 126 473-602 19-160 (953)
140 cd05113 PTKc_Btk_Bmx Catalytic 99.5 6.4E-14 1.4E-18 141.7 14.3 117 474-596 5-127 (256)
141 PHA03207 serine/threonine kina 99.5 1.9E-13 4.1E-18 147.6 18.7 117 471-596 90-212 (392)
142 cd05105 PTKc_PDGFR_alpha Catal 99.5 4.8E-14 1E-18 152.6 13.8 88 473-560 37-135 (400)
143 cd07862 STKc_CDK6 Catalytic do 99.5 1E-13 2.3E-18 142.5 15.6 125 474-602 2-147 (290)
144 PRK13184 pknD serine/threonine 99.5 6.7E-14 1.4E-18 161.7 15.3 122 474-596 3-140 (932)
145 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.5 4.7E-14 1E-18 144.5 12.7 111 480-596 2-144 (274)
146 cd05632 STKc_GRK5 Catalytic do 99.5 1.2E-13 2.5E-18 142.3 15.7 117 475-596 2-129 (285)
147 KOG0607 MAP kinase-interacting 99.5 6.9E-15 1.5E-19 146.3 6.2 113 478-596 83-203 (463)
148 cd05068 PTKc_Frk_like Catalyti 99.5 9.7E-14 2.1E-18 140.5 14.8 119 473-596 6-130 (261)
149 KOG4721 Serine/threonine prote 99.5 9.5E-15 2.1E-19 154.5 7.5 113 475-596 126-239 (904)
150 cd06615 PKc_MEK Catalytic doma 99.5 9.9E-14 2.1E-18 144.5 14.9 122 474-602 2-137 (308)
151 PF00069 Pkinase: Protein kina 99.5 1E-13 2.2E-18 139.6 14.5 115 475-596 1-125 (260)
152 cd07876 STKc_JNK2 Catalytic do 99.5 6.9E-14 1.5E-18 149.0 13.8 117 471-596 19-150 (359)
153 cd05630 STKc_GRK6 Catalytic do 99.5 1.4E-13 3.1E-18 141.7 15.6 117 475-596 2-129 (285)
154 KOG0660 Mitogen-activated prot 99.5 2.1E-14 4.4E-19 145.8 9.0 126 470-609 19-158 (359)
155 COG1520 FOG: WD40-like repeat 99.5 1.5E-13 3.3E-18 147.2 16.2 164 46-230 109-279 (370)
156 cd05084 PTKc_Fes Catalytic dom 99.5 6.4E-14 1.4E-18 141.0 12.5 112 479-596 1-121 (252)
157 cd05067 PTKc_Lck_Blk Catalytic 99.5 1.2E-13 2.5E-18 139.9 14.4 118 473-596 6-129 (260)
158 cd06646 STKc_MAP4K5 Catalytic 99.5 8.9E-14 1.9E-18 141.2 13.4 116 474-596 10-133 (267)
159 cd05066 PTKc_EphR_A Catalytic 99.5 1E-13 2.2E-18 140.9 13.8 117 474-596 5-133 (267)
160 PLN00034 mitogen-activated pro 99.5 2.7E-14 6E-19 151.8 9.9 120 475-602 76-205 (353)
161 cd08228 STKc_Nek6 Catalytic do 99.5 1.6E-13 3.5E-18 139.2 15.0 120 474-596 3-133 (267)
162 PLN00009 cyclin-dependent kina 99.5 1.5E-13 3.2E-18 141.8 15.0 118 474-596 3-129 (294)
163 cd05580 STKc_PKA Catalytic dom 99.5 1.7E-13 3.6E-18 141.3 15.4 122 474-602 2-138 (290)
164 cd07836 STKc_Pho85 Catalytic d 99.5 1.8E-13 3.8E-18 140.2 15.4 118 475-596 2-127 (284)
165 cd05033 PTKc_EphR Catalytic do 99.5 1.2E-13 2.5E-18 140.3 14.0 117 474-596 5-133 (266)
166 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.5 6.8E-14 1.5E-18 142.4 12.1 116 479-596 1-127 (269)
167 cd07875 STKc_JNK1 Catalytic do 99.5 6.8E-14 1.5E-18 149.4 12.4 119 472-596 23-153 (364)
168 cd05103 PTKc_VEGFR2 Catalytic 99.5 5.3E-14 1.1E-18 149.0 11.4 88 473-560 7-106 (343)
169 KOG0599 Phosphorylase kinase g 99.5 5.4E-15 1.2E-19 144.2 3.4 120 474-596 18-150 (411)
170 cd05059 PTKc_Tec_like Catalyti 99.5 1.1E-13 2.5E-18 139.7 13.2 122 475-602 6-137 (256)
171 PTZ00283 serine/threonine prot 99.5 1.6E-13 3.4E-18 152.6 15.5 121 473-596 32-170 (496)
172 cd06645 STKc_MAP4K3 Catalytic 99.5 5.8E-14 1.3E-18 142.5 11.0 116 474-596 10-133 (267)
173 cd05586 STKc_Sck1_like Catalyt 99.5 1.3E-13 2.9E-18 145.0 14.0 116 481-602 1-133 (330)
174 cd07870 STKc_PFTAIRE2 Catalyti 99.5 3E-13 6.6E-18 139.3 16.3 118 473-596 5-130 (291)
175 cd05034 PTKc_Src_like Catalyti 99.5 2.3E-13 5E-18 137.5 15.0 119 473-596 6-130 (261)
176 cd05052 PTKc_Abl Catalytic dom 99.5 1.7E-13 3.8E-18 138.9 14.1 117 475-596 8-131 (263)
177 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.5 1.9E-13 4.2E-18 140.1 14.5 123 474-602 5-145 (284)
178 TIGR03074 PQQ_membr_DH membran 99.5 2E-13 4.3E-18 156.3 15.8 169 44-231 256-489 (764)
179 cd07863 STKc_CDK4 Catalytic do 99.5 2.4E-13 5.2E-18 139.6 15.0 124 475-602 2-145 (288)
180 PTZ00266 NIMA-related protein 99.5 1.9E-13 4E-18 158.7 15.7 134 473-609 13-158 (1021)
181 cd07874 STKc_JNK3 Catalytic do 99.5 1E-13 2.3E-18 147.3 12.6 123 471-602 15-156 (355)
182 cd08219 STKc_Nek3 Catalytic do 99.5 3.6E-13 7.9E-18 135.7 15.9 117 475-596 2-127 (255)
183 cd07878 STKc_p38beta_MAPK11 Ca 99.5 5.7E-14 1.2E-18 148.6 10.2 118 471-596 13-145 (343)
184 KOG1095 Protein tyrosine kinas 99.5 8.1E-14 1.8E-18 160.2 12.1 123 473-596 692-829 (1025)
185 cd05042 PTKc_Aatyk Catalytic d 99.5 1.6E-13 3.5E-18 139.5 13.2 121 480-602 2-137 (269)
186 cd05607 STKc_GRK7 Catalytic do 99.5 2.3E-13 5E-18 139.5 14.4 111 481-596 1-122 (277)
187 cd07867 STKc_CDC2L6 Catalytic 99.5 2.2E-13 4.7E-18 142.1 14.3 118 478-596 6-135 (317)
188 PHA03209 serine/threonine kina 99.5 1.5E-13 3.3E-18 146.4 13.5 114 474-596 67-184 (357)
189 cd06624 STKc_ASK Catalytic dom 99.5 2.1E-13 4.5E-18 138.7 13.7 117 476-596 11-135 (268)
190 cd05097 PTKc_DDR_like Catalyti 99.5 1.1E-13 2.3E-18 143.2 11.6 122 474-596 6-156 (295)
191 cd05071 PTKc_Src Catalytic dom 99.5 2.2E-13 4.8E-18 138.3 13.7 118 473-596 6-129 (262)
192 cd05107 PTKc_PDGFR_beta Cataly 99.5 1.6E-13 3.4E-18 148.6 13.3 88 473-560 37-135 (401)
193 cd08224 STKc_Nek6_Nek7 Catalyt 99.5 4.2E-13 9.1E-18 135.9 15.6 120 474-596 3-133 (267)
194 cd08221 STKc_Nek9 Catalytic do 99.5 4E-13 8.6E-18 135.4 15.2 118 474-596 1-128 (256)
195 cd06638 STKc_myosinIIIA Cataly 99.5 4.1E-13 8.8E-18 137.7 15.5 124 471-596 16-151 (286)
196 cd05079 PTKc_Jak1_rpt2 Catalyt 99.5 1.9E-13 4.1E-18 140.4 12.9 117 474-596 5-136 (284)
197 cd05085 PTKc_Fer Catalytic dom 99.5 2.3E-13 5E-18 136.6 13.3 112 479-596 1-120 (250)
198 KOG0612 Rho-associated, coiled 99.5 6.8E-15 1.5E-19 166.5 2.2 124 473-603 75-213 (1317)
199 cd05148 PTKc_Srm_Brk Catalytic 99.5 9E-14 1.9E-18 140.5 10.3 118 474-596 7-131 (261)
200 cd05039 PTKc_Csk_like Catalyti 99.5 3E-13 6.4E-18 136.5 14.0 117 474-596 7-129 (256)
201 cd06625 STKc_MEKK3_like Cataly 99.5 3E-13 6.4E-18 136.8 13.9 116 474-596 3-131 (263)
202 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.5 5.9E-14 1.3E-18 142.0 8.8 118 479-602 1-137 (258)
203 cd06637 STKc_TNIK Catalytic do 99.5 2.9E-13 6.4E-18 137.6 13.9 125 474-602 7-148 (272)
204 cd07842 STKc_CDK8_like Catalyt 99.5 5.1E-13 1.1E-17 138.9 16.0 126 475-602 2-145 (316)
205 KOG0201 Serine/threonine prote 99.5 9.6E-15 2.1E-19 151.2 2.7 119 474-596 14-138 (467)
206 cd05055 PTKc_PDGFR Catalytic d 99.5 2.7E-13 5.9E-18 140.9 13.7 120 473-596 35-168 (302)
207 cd05046 PTK_CCK4 Pseudokinase 99.5 2.5E-13 5.4E-18 138.5 13.2 122 474-596 6-144 (275)
208 cd05065 PTKc_EphR_B Catalytic 99.5 3.4E-13 7.5E-18 137.1 14.1 116 475-596 6-133 (269)
209 cd05088 PTKc_Tie2 Catalytic do 99.5 2.8E-13 6.1E-18 140.8 13.7 123 474-596 8-151 (303)
210 KOG4278 Protein tyrosine kinas 99.5 3.5E-14 7.6E-19 151.3 6.8 120 475-596 269-392 (1157)
211 cd05070 PTKc_Fyn_Yrk Catalytic 99.5 2.6E-13 5.7E-18 137.3 12.9 117 474-596 7-129 (260)
212 cd07841 STKc_CDK7 Catalytic do 99.5 3.3E-13 7.1E-18 139.4 13.8 116 475-596 2-129 (298)
213 cd08529 STKc_FA2-like Catalyti 99.5 4.1E-13 8.8E-18 135.1 14.1 117 475-596 2-128 (256)
214 cd07860 STKc_CDK2_3 Catalytic 99.5 2.4E-13 5.2E-18 139.3 12.7 123 475-602 2-137 (284)
215 cd05098 PTKc_FGFR1 Catalytic d 99.5 4.6E-13 9.9E-18 139.3 14.9 130 473-602 18-177 (307)
216 cd06630 STKc_MEKK1 Catalytic d 99.5 2.8E-13 6.1E-18 137.3 13.0 115 475-596 2-130 (268)
217 cd07868 STKc_CDK8 Catalytic do 99.5 4.1E-13 8.8E-18 140.2 14.4 118 478-596 6-135 (317)
218 cd07847 STKc_CDKL1_4 Catalytic 99.5 6.4E-13 1.4E-17 136.1 15.6 122 474-602 2-137 (286)
219 cd07839 STKc_CDK5 Catalytic do 99.5 2.1E-13 4.6E-18 139.7 12.0 116 475-596 2-126 (284)
220 cd06631 STKc_YSK4 Catalytic do 99.5 5E-13 1.1E-17 135.5 14.6 115 475-596 2-129 (265)
221 cd05069 PTKc_Yes Catalytic dom 99.5 5.5E-13 1.2E-17 135.0 14.7 117 474-596 7-129 (260)
222 cd05112 PTKc_Itk Catalytic dom 99.5 7E-13 1.5E-17 133.6 15.4 116 475-596 6-127 (256)
223 cd05073 PTKc_Hck Catalytic dom 99.5 5.3E-13 1.1E-17 135.1 14.5 118 473-596 6-129 (260)
224 cd07831 STKc_MOK Catalytic dom 99.5 3.9E-13 8.5E-18 137.3 13.6 117 475-596 1-127 (282)
225 cd06656 STKc_PAK3 Catalytic do 99.5 4.6E-13 9.9E-18 138.8 14.3 122 473-602 19-152 (297)
226 cd05049 PTKc_Trk Catalytic dom 99.5 2E-13 4.4E-18 139.4 11.3 121 475-596 7-149 (280)
227 PTZ00284 protein kinase; Provi 99.5 5E-13 1.1E-17 147.7 15.2 118 473-596 129-259 (467)
228 cd06652 STKc_MEKK2 Catalytic d 99.5 6.4E-13 1.4E-17 134.8 14.8 116 474-596 3-133 (265)
229 cd05062 PTKc_IGF-1R Catalytic 99.5 4.5E-13 9.7E-18 137.0 13.7 123 473-596 6-146 (277)
230 cd06654 STKc_PAK1 Catalytic do 99.5 6.2E-13 1.3E-17 137.7 14.9 116 473-596 20-143 (296)
231 cd06611 STKc_SLK_like Catalyti 99.5 2.4E-13 5.2E-18 139.1 11.6 117 474-596 6-130 (280)
232 cd05609 STKc_MAST Catalytic do 99.5 7E-13 1.5E-17 137.8 15.3 116 474-596 2-128 (305)
233 cd05061 PTKc_InsR Catalytic do 99.5 5.7E-13 1.2E-17 137.2 14.4 123 473-596 6-146 (288)
234 cd05574 STKc_phototropin_like 99.5 6.1E-13 1.3E-17 138.8 14.7 124 474-602 2-140 (316)
235 cd08220 STKc_Nek8 Catalytic do 99.5 7.6E-13 1.6E-17 133.1 14.9 117 475-596 2-128 (256)
236 cd05086 PTKc_Aatyk2 Catalytic 99.5 3E-13 6.4E-18 137.8 12.0 114 480-596 2-126 (268)
237 cd05035 PTKc_Axl_like Catalyti 99.5 4.1E-13 8.9E-18 136.4 13.0 121 475-596 1-140 (273)
238 cd06619 PKc_MKK5 Catalytic dom 99.5 4.3E-13 9.4E-18 137.4 13.2 112 474-596 2-122 (279)
239 cd05101 PTKc_FGFR2 Catalytic d 99.5 5E-13 1.1E-17 138.7 13.8 124 473-596 15-164 (304)
240 KOG0608 Warts/lats-like serine 99.5 1.2E-13 2.7E-18 147.7 9.2 124 473-603 629-767 (1034)
241 cd06613 STKc_MAP4K3_like Catal 99.5 1.2E-12 2.6E-17 132.1 16.1 118 473-596 3-128 (262)
242 cd05077 PTK_Jak1_rpt1 Pseudoki 99.5 5E-13 1.1E-17 135.8 13.2 112 479-596 1-132 (262)
243 cd06644 STKc_STK10_LOK Catalyt 99.5 6.8E-13 1.5E-17 136.8 14.4 118 473-596 12-137 (292)
244 cd07837 STKc_CdkB_plant Cataly 99.5 7.8E-13 1.7E-17 136.3 14.8 122 474-596 2-137 (295)
245 cd05613 STKc_MSK1_N N-terminal 99.5 8.1E-13 1.8E-17 136.0 14.7 116 475-596 2-132 (290)
246 cd05037 PTK_Jak_rpt1 Pseudokin 99.5 5.6E-13 1.2E-17 134.3 13.2 111 479-596 1-128 (259)
247 cd05093 PTKc_TrkB Catalytic do 99.5 6E-13 1.3E-17 137.1 13.6 122 474-596 6-147 (288)
248 cd06607 STKc_TAO Catalytic dom 99.5 6.8E-13 1.5E-17 138.0 14.2 118 473-596 15-142 (307)
249 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.5 7E-13 1.5E-17 136.0 14.0 114 475-596 6-134 (283)
250 PHA02988 hypothetical protein; 99.5 7.9E-13 1.7E-17 136.2 14.4 110 479-596 26-150 (283)
251 cd05053 PTKc_FGFR Catalytic do 99.5 6.6E-13 1.4E-17 136.8 13.9 124 473-596 12-159 (293)
252 cd05611 STKc_Rim15_like Cataly 99.5 4.8E-13 1E-17 135.2 12.6 112 479-596 2-124 (260)
253 cd05095 PTKc_DDR2 Catalytic do 99.5 5.1E-13 1.1E-17 138.1 13.0 122 474-596 6-157 (296)
254 cd08229 STKc_Nek7 Catalytic do 99.5 3.4E-13 7.3E-18 136.8 11.4 119 475-596 4-133 (267)
255 cd05075 PTKc_Axl Catalytic dom 99.5 5.7E-13 1.2E-17 135.5 13.1 120 476-596 2-139 (272)
256 cd05099 PTKc_FGFR4 Catalytic d 99.5 7.6E-13 1.6E-17 138.2 14.3 124 473-596 12-161 (314)
257 cd06639 STKc_myosinIIIB Cataly 99.5 1.7E-12 3.6E-17 133.7 16.7 129 472-602 21-165 (291)
258 cd08226 PK_STRAD_beta Pseudoki 99.5 4.1E-13 8.8E-18 141.2 12.3 113 479-596 4-128 (328)
259 cd05043 PTK_Ryk Pseudokinase d 99.4 8.5E-13 1.8E-17 135.1 14.2 123 473-596 6-144 (280)
260 cd05082 PTKc_Csk Catalytic dom 99.4 9.5E-13 2.1E-17 132.8 14.4 117 474-596 7-129 (256)
261 cd05038 PTKc_Jak_rpt2 Catalyti 99.4 6.4E-13 1.4E-17 135.8 13.3 122 474-601 5-145 (284)
262 cd05057 PTKc_EGFR_like Catalyt 99.4 8E-13 1.7E-17 135.3 14.0 117 473-596 7-136 (279)
263 cd05045 PTKc_RET Catalytic dom 99.4 5.5E-13 1.2E-17 137.4 12.8 121 475-596 2-154 (290)
264 cd06629 STKc_MAPKKK_Bck1_like 99.4 8.6E-13 1.9E-17 134.3 14.1 115 475-596 3-135 (272)
265 cd05089 PTKc_Tie1 Catalytic do 99.4 6.4E-13 1.4E-17 137.5 13.3 123 474-596 3-146 (297)
266 cd05032 PTKc_InsR_like Catalyt 99.4 8.6E-13 1.9E-17 134.6 14.1 129 473-602 6-156 (277)
267 cd06641 STKc_MST3 Catalytic do 99.4 5.1E-13 1.1E-17 136.7 12.4 121 474-602 5-138 (277)
268 cd07832 STKc_CCRK Catalytic do 99.4 1.2E-12 2.6E-17 134.0 15.2 116 475-596 2-126 (286)
269 KOG4279 Serine/threonine prote 99.4 1.2E-13 2.6E-18 149.0 7.9 116 480-596 582-702 (1226)
270 cd05050 PTKc_Musk Catalytic do 99.4 7.3E-13 1.6E-17 136.2 13.5 122 474-596 6-157 (288)
271 cd05083 PTKc_Chk Catalytic dom 99.4 7.3E-13 1.6E-17 133.5 13.2 116 474-596 7-127 (254)
272 cd06622 PKc_MAPKK_PBS2_like Ca 99.4 3.1E-13 6.8E-18 138.7 10.7 119 474-596 2-130 (286)
273 cd08225 STKc_Nek5 Catalytic do 99.4 8E-13 1.7E-17 133.0 13.3 117 475-596 2-128 (257)
274 cd07843 STKc_CDC2L1 Catalytic 99.4 7E-13 1.5E-17 136.7 13.2 117 474-596 6-133 (293)
275 cd05036 PTKc_ALK_LTK Catalytic 99.4 8.8E-13 1.9E-17 134.9 13.8 123 473-596 6-143 (277)
276 cd05578 STKc_Yank1 Catalytic d 99.4 4.8E-13 1E-17 135.1 11.6 122 475-603 2-138 (258)
277 cd05063 PTKc_EphR_A2 Catalytic 99.4 9.9E-13 2.1E-17 133.6 13.9 117 474-596 6-134 (268)
278 cd08218 STKc_Nek1 Catalytic do 99.4 1.6E-12 3.4E-17 131.1 15.1 117 475-596 2-128 (256)
279 cd06655 STKc_PAK2 Catalytic do 99.4 1.3E-12 2.8E-17 135.5 14.7 116 473-596 19-142 (296)
280 KOG1290 Serine/threonine prote 99.4 3.2E-12 6.9E-17 133.9 17.4 128 473-610 78-222 (590)
281 cd06632 STKc_MEKK1_plant Catal 99.4 1.2E-12 2.5E-17 131.8 13.9 115 475-596 2-129 (258)
282 cd05109 PTKc_HER2 Catalytic do 99.4 1E-12 2.2E-17 134.5 13.7 117 473-596 7-136 (279)
283 cd07865 STKc_CDK9 Catalytic do 99.4 1.5E-12 3.3E-17 134.9 15.2 117 474-596 13-146 (310)
284 cd07856 STKc_Sty1_Hog1 Catalyt 99.4 9.5E-13 2.1E-17 138.6 13.8 119 470-596 7-135 (328)
285 PTZ00024 cyclin-dependent prot 99.4 7.1E-13 1.5E-17 139.6 12.7 117 473-596 8-146 (335)
286 cd07849 STKc_ERK1_2_like Catal 99.4 9.9E-13 2.1E-17 138.8 13.8 118 471-596 3-133 (336)
287 cd06610 STKc_OSR1_SPAK Catalyt 99.4 2.3E-12 5E-17 130.3 15.9 119 474-596 2-129 (267)
288 cd07864 STKc_CDK12 Catalytic d 99.4 1E-12 2.2E-17 136.0 13.4 118 473-596 7-143 (302)
289 cd06635 STKc_TAO1 Catalytic do 99.4 1.1E-12 2.3E-17 137.3 13.8 120 471-596 23-152 (317)
290 cd06628 STKc_MAPKKK_Byr2_like 99.4 1.3E-12 2.9E-17 132.4 14.1 115 475-596 2-133 (267)
291 cd06620 PKc_MAPKK_Byr1_like Ca 99.4 6.4E-13 1.4E-17 136.5 11.8 115 475-596 7-131 (284)
292 KOG0666 Cyclin C-dependent kin 99.4 7.1E-14 1.5E-18 138.8 4.5 120 475-596 26-159 (438)
293 cd06636 STKc_MAP4K4_6 Catalyti 99.4 1.2E-12 2.5E-17 134.2 13.7 125 474-602 17-158 (282)
294 KOG2345 Serine/threonine prote 99.4 2.2E-13 4.7E-18 131.8 7.5 121 473-596 21-156 (302)
295 cd05115 PTKc_Zap-70 Catalytic 99.4 1.2E-12 2.7E-17 132.4 13.5 110 480-596 2-122 (257)
296 KOG4649 PQQ (pyrrolo-quinoline 99.4 1.2E-12 2.7E-17 126.6 12.6 152 48-229 23-177 (354)
297 cd05051 PTKc_DDR Catalytic dom 99.4 9.4E-13 2E-17 135.7 12.8 122 474-596 6-157 (296)
298 cd07845 STKc_CDK10 Catalytic d 99.4 1.9E-12 4.2E-17 134.7 15.2 118 473-596 7-135 (309)
299 cd06643 STKc_SLK Catalytic dom 99.4 7.7E-13 1.7E-17 135.6 12.1 116 475-596 7-130 (282)
300 cd05092 PTKc_TrkA Catalytic do 99.4 9.5E-13 2.1E-17 135.0 12.6 122 474-596 6-149 (280)
301 cd05054 PTKc_VEGFR Catalytic d 99.4 6E-13 1.3E-17 140.7 11.4 88 473-560 7-106 (337)
302 cd05048 PTKc_Ror Catalytic Dom 99.4 1.3E-12 2.8E-17 133.8 13.5 122 474-596 6-151 (283)
303 cd07850 STKc_JNK Catalytic dom 99.4 1.2E-12 2.6E-17 139.2 13.4 123 471-602 14-155 (353)
304 cd07855 STKc_ERK5 Catalytic do 99.4 7.1E-13 1.5E-17 139.7 11.6 124 472-602 4-144 (334)
305 KOG0690 Serine/threonine prote 99.4 1.1E-13 2.3E-18 138.1 4.8 124 473-603 168-306 (516)
306 cd05094 PTKc_TrkC Catalytic do 99.4 1.8E-12 4E-17 133.7 14.3 121 475-596 7-150 (291)
307 cd05100 PTKc_FGFR3 Catalytic d 99.4 1.7E-12 3.6E-17 136.9 14.3 124 473-596 12-161 (334)
308 cd00192 PTKc Catalytic domain 99.4 1.4E-12 3E-17 131.1 13.1 117 479-596 1-132 (262)
309 cd08217 STKc_Nek2 Catalytic do 99.4 1.9E-12 4.1E-17 130.5 14.1 119 475-596 2-137 (265)
310 cd08223 STKc_Nek4 Catalytic do 99.4 2.7E-12 5.9E-17 129.2 15.2 117 475-596 2-129 (257)
311 cd07846 STKc_CDKL2_3 Catalytic 99.4 8.2E-13 1.8E-17 135.4 11.5 116 474-596 2-127 (286)
312 cd07833 STKc_CDKL Catalytic do 99.4 1.9E-12 4.1E-17 132.7 14.2 117 474-596 2-127 (288)
313 KOG1025 Epidermal growth facto 99.4 7.9E-14 1.7E-18 153.1 4.1 118 475-596 698-825 (1177)
314 cd06651 STKc_MEKK3 Catalytic d 99.4 2.6E-12 5.6E-17 130.5 14.9 116 474-596 3-133 (266)
315 cd06621 PKc_MAPKK_Pek1_like Ca 99.4 2.6E-12 5.6E-17 132.3 15.1 120 474-596 2-132 (287)
316 cd06608 STKc_myosinIII_like Ca 99.4 2.3E-12 5E-17 130.8 14.5 128 473-602 6-150 (275)
317 cd07880 STKc_p38gamma_MAPK12 C 99.4 1.7E-12 3.8E-17 137.5 14.1 124 471-602 13-155 (343)
318 cd06612 STKc_MST1_2 Catalytic 99.4 1.7E-12 3.7E-17 130.6 13.4 117 474-596 4-126 (256)
319 cd06647 STKc_PAK_I Catalytic d 99.4 1.3E-12 2.8E-17 135.2 12.7 116 473-596 19-142 (293)
320 PRK09188 serine/threonine prot 99.4 1.4E-12 3E-17 138.1 13.1 113 469-596 14-139 (365)
321 cd06626 STKc_MEKK4 Catalytic d 99.4 2.3E-12 4.9E-17 130.2 14.3 115 475-596 2-126 (264)
322 cd05577 STKc_GRK Catalytic dom 99.4 2.1E-12 4.5E-17 132.2 14.1 111 481-596 1-122 (277)
323 cd07835 STKc_CDK1_like Catalyt 99.4 1.4E-12 3.1E-17 133.5 12.7 117 475-596 1-126 (283)
324 cd05116 PTKc_Syk Catalytic dom 99.4 1.2E-12 2.7E-17 132.2 12.0 109 480-596 2-122 (257)
325 cd07877 STKc_p38alpha_MAPK14 C 99.4 2.3E-12 4.9E-17 136.7 14.3 118 471-596 15-147 (345)
326 cd05041 PTKc_Fes_like Catalyti 99.4 2.2E-12 4.8E-17 129.5 13.6 112 479-596 1-120 (251)
327 cd05056 PTKc_FAK Catalytic dom 99.4 1.9E-12 4.2E-17 131.7 13.3 116 474-596 7-134 (270)
328 cd06623 PKc_MAPKK_plant_like C 99.4 4E-12 8.6E-17 128.3 15.5 116 474-596 2-127 (264)
329 KOG0579 Ste20-like serine/thre 99.4 2.5E-14 5.5E-19 152.6 -0.6 117 474-596 33-157 (1187)
330 cd06653 STKc_MEKK3_like_1 Cata 99.4 3.8E-12 8.1E-17 129.2 15.2 122 474-602 3-143 (264)
331 KOG4645 MAPKKK (MAP kinase kin 99.4 7.8E-14 1.7E-18 160.0 3.0 125 474-602 1236-1371(1509)
332 cd06640 STKc_MST4 Catalytic do 99.4 1.1E-12 2.5E-17 134.1 11.3 115 474-596 5-128 (277)
333 KOG1006 Mitogen-activated prot 99.4 4.3E-14 9.3E-19 137.7 0.7 125 475-609 66-201 (361)
334 cd05044 PTKc_c-ros Catalytic d 99.4 1.2E-12 2.6E-17 132.9 11.3 116 480-596 2-133 (269)
335 cd07858 STKc_TEY_MAPK_plant Ca 99.4 1.8E-12 4E-17 136.8 13.1 118 472-596 4-135 (337)
336 cd06633 STKc_TAO3 Catalytic do 99.4 2.3E-12 5E-17 134.6 13.7 121 470-596 18-148 (313)
337 cd05047 PTKc_Tie Catalytic dom 99.4 2.1E-12 4.4E-17 131.7 12.9 118 479-596 1-139 (270)
338 cd05111 PTK_HER3 Pseudokinase 99.4 1.6E-12 3.6E-17 133.2 12.3 116 474-596 8-136 (279)
339 cd07840 STKc_CDK9_like Catalyt 99.4 3.1E-12 6.7E-17 130.8 14.3 122 475-602 1-137 (287)
340 KOG4649 PQQ (pyrrolo-quinoline 99.4 2.7E-12 5.9E-17 124.2 12.6 184 29-245 44-230 (354)
341 cd06609 STKc_MST3_like Catalyt 99.4 1.7E-12 3.7E-17 132.4 11.8 121 474-602 2-135 (274)
342 KOG0199 ACK and related non-re 99.4 3.1E-13 6.8E-18 146.2 6.2 117 474-596 111-239 (1039)
343 cd06605 PKc_MAPKK Catalytic do 99.4 1.7E-12 3.7E-17 131.3 11.4 116 475-596 3-128 (265)
344 KOG0584 Serine/threonine prote 99.4 3.6E-13 7.7E-18 145.2 6.4 120 473-596 40-172 (632)
345 smart00219 TyrKc Tyrosine kina 99.4 3.4E-12 7.5E-17 128.2 13.3 116 476-596 2-130 (258)
346 cd06614 STKc_PAK Catalytic dom 99.4 5.8E-12 1.2E-16 129.4 15.2 126 471-602 17-153 (286)
347 cd06917 STKc_NAK1_like Catalyt 99.4 2.5E-12 5.4E-17 131.3 12.2 115 475-596 3-128 (277)
348 cd06642 STKc_STK25-YSK1 Cataly 99.4 6E-13 1.3E-17 136.1 7.7 115 474-596 5-128 (277)
349 cd06659 STKc_PAK6 Catalytic do 99.4 1.2E-12 2.5E-17 135.8 9.8 120 475-602 23-154 (297)
350 PRK10345 hypothetical protein; 99.4 3.9E-12 8.4E-17 124.9 12.6 112 476-596 5-132 (210)
351 cd05572 STKc_cGK_PKG Catalytic 99.4 4E-12 8.6E-17 128.6 13.1 109 481-596 1-120 (262)
352 cd06606 STKc_MAPKKK Catalytic 99.4 8.7E-12 1.9E-16 124.8 15.5 115 475-596 2-128 (260)
353 KOG4257 Focal adhesion tyrosin 99.4 8E-13 1.7E-17 141.5 8.2 120 473-596 389-518 (974)
354 cd05583 STKc_MSK_N N-terminal 99.4 5.1E-12 1.1E-16 130.0 13.8 122 475-602 2-142 (288)
355 cd06627 STKc_Cdc7_like Catalyt 99.4 9.5E-12 2.1E-16 124.7 15.4 115 475-596 2-126 (254)
356 cd06658 STKc_PAK5 Catalytic do 99.4 1.5E-12 3.3E-17 134.6 9.9 115 474-596 23-145 (292)
357 cd05058 PTKc_Met_Ron Catalytic 99.4 3.9E-12 8.4E-17 128.6 12.6 112 479-596 1-125 (262)
358 cd05633 STKc_GRK3 Catalytic do 99.4 6.4E-12 1.4E-16 129.0 14.2 111 480-596 1-124 (279)
359 cd07866 STKc_BUR1 Catalytic do 99.4 4.9E-12 1.1E-16 131.1 13.5 124 473-602 8-152 (311)
360 cd05040 PTKc_Ack_like Catalyti 99.4 4.7E-12 1E-16 127.6 12.8 112 479-596 1-124 (257)
361 cd07830 STKc_MAK_like Catalyti 99.4 2.1E-12 4.6E-17 132.1 10.3 118 475-596 1-126 (283)
362 cd07854 STKc_MAPK4_6 Catalytic 99.4 4.1E-12 8.9E-17 134.5 12.8 117 472-596 4-141 (342)
363 PHA03210 serine/threonine kina 99.4 1.8E-12 4E-17 144.4 10.6 130 471-602 146-304 (501)
364 cd05074 PTKc_Tyro3 Catalytic d 99.4 5.1E-12 1.1E-16 128.6 13.0 121 475-596 1-140 (273)
365 cd05581 STKc_PDK1 Catalytic do 99.4 2.8E-12 6.1E-17 130.6 11.0 123 474-602 2-139 (280)
366 cd05091 PTKc_Ror2 Catalytic do 99.4 2.9E-12 6.2E-17 131.3 11.0 121 475-596 7-151 (283)
367 cd05110 PTKc_HER4 Catalytic do 99.4 5E-12 1.1E-16 131.3 12.8 116 474-596 8-136 (303)
368 cd05060 PTKc_Syk_like Catalyti 99.4 6E-12 1.3E-16 127.1 13.0 110 479-596 1-122 (257)
369 cd07852 STKc_MAPK15 Catalytic 99.4 2.1E-12 4.5E-17 136.3 10.0 126 470-602 4-144 (337)
370 PHA03390 pk1 serine/threonine- 99.4 7.2E-12 1.6E-16 127.8 13.6 108 481-596 24-136 (267)
371 cd06618 PKc_MKK7 Catalytic dom 99.4 7.2E-12 1.6E-16 129.5 13.5 119 473-596 15-142 (296)
372 cd05147 RIO1_euk RIO kinase fa 99.4 1.9E-12 4.2E-17 125.5 8.6 110 478-596 2-145 (190)
373 cd08216 PK_STRAD Pseudokinase 99.3 3.3E-12 7.2E-17 133.0 11.0 113 478-596 7-128 (314)
374 cd08528 STKc_Nek10 Catalytic d 99.3 8E-12 1.7E-16 126.9 13.6 120 475-596 2-141 (269)
375 KOG0984 Mitogen-activated prot 99.3 9E-13 1.9E-17 124.3 5.8 128 474-609 47-182 (282)
376 cd07838 STKc_CDK4_6_like Catal 99.3 1.1E-11 2.5E-16 126.7 14.6 124 475-602 1-144 (287)
377 cd07857 STKc_MPK1 Catalytic do 99.3 1.1E-11 2.4E-16 130.6 14.5 122 475-602 2-142 (332)
378 cd05118 STKc_CMGC Catalytic do 99.3 4.6E-12 9.9E-17 129.4 11.2 122 475-602 1-135 (283)
379 cd07834 STKc_MAPK Catalytic do 99.3 4.4E-12 9.5E-17 133.2 11.2 121 475-602 2-140 (330)
380 KOG0596 Dual specificity; seri 99.3 1.5E-12 3.3E-17 138.1 7.5 118 473-596 361-487 (677)
381 cd08215 STKc_Nek Catalytic dom 99.3 1.9E-11 4E-16 122.6 15.0 119 475-596 2-130 (258)
382 cd06648 STKc_PAK_II Catalytic 99.3 9.1E-12 2E-16 128.2 13.0 114 475-596 21-142 (285)
383 cd06634 STKc_TAO2 Catalytic do 99.3 8.4E-12 1.8E-16 130.0 12.8 116 475-596 17-142 (308)
384 KOG1035 eIF-2alpha kinase GCN2 99.3 1.1E-12 2.5E-17 149.9 6.5 63 473-536 479-546 (1351)
385 cd05606 STKc_beta_ARK Catalyti 99.3 1.4E-11 3.1E-16 126.3 14.0 111 480-596 1-124 (278)
386 cd06657 STKc_PAK4 Catalytic do 99.3 7.3E-12 1.6E-16 129.6 11.6 114 475-596 22-143 (292)
387 cd05579 STKc_MAST_like Catalyt 99.3 6E-12 1.3E-16 126.8 10.7 115 481-602 1-130 (265)
388 cd08530 STKc_CNK2-like Catalyt 99.3 1E-11 2.2E-16 124.7 11.8 119 475-596 2-130 (256)
389 cd06616 PKc_MKK4 Catalytic dom 99.3 8.4E-12 1.8E-16 128.2 11.3 121 475-596 6-135 (288)
390 TIGR03075 PQQ_enz_alc_DH PQQ-d 99.3 1.1E-11 2.3E-16 138.3 12.3 139 64-230 43-200 (527)
391 cd07879 STKc_p38delta_MAPK13 C 99.3 1.1E-11 2.3E-16 131.3 11.8 115 473-596 15-144 (342)
392 cd05122 PKc_STE Catalytic doma 99.3 3.9E-11 8.5E-16 119.6 15.2 116 475-596 2-125 (253)
393 PLN03224 probable serine/threo 99.3 1.2E-11 2.7E-16 136.3 12.5 123 473-596 145-336 (507)
394 KOG1151 Tousled-like protein k 99.3 1.1E-12 2.3E-17 135.5 3.8 127 469-609 459-603 (775)
395 cd07829 STKc_CDK_like Catalyti 99.3 9.4E-12 2E-16 127.0 10.5 116 475-596 1-125 (282)
396 cd07851 STKc_p38 Catalytic dom 99.3 1.1E-11 2.3E-16 131.3 11.0 124 471-602 13-155 (343)
397 cd08222 STKc_Nek11 Catalytic d 99.3 8.6E-12 1.9E-16 126.0 9.3 119 475-596 2-133 (260)
398 KOG0669 Cyclin T-dependent kin 99.3 7.3E-14 1.6E-18 135.1 -5.7 124 473-602 17-161 (376)
399 KOG0696 Serine/threonine prote 99.3 1.3E-12 2.9E-17 133.8 3.1 124 474-603 350-488 (683)
400 KOG0983 Mitogen-activated prot 99.3 2.6E-12 5.6E-17 125.8 4.6 123 475-609 94-225 (391)
401 KOG0576 Mitogen-activated prot 99.3 4.5E-13 9.7E-18 144.6 -0.7 117 473-596 15-139 (829)
402 cd05576 STKc_RPK118_like Catal 99.3 2.8E-11 6.1E-16 121.1 11.6 110 484-602 4-122 (237)
403 KOG0604 MAP kinase-activated p 99.3 4E-12 8.6E-17 126.0 4.9 120 471-596 59-188 (400)
404 cd05123 STKc_AGC Catalytic dom 99.3 2.6E-11 5.7E-16 121.4 10.8 109 481-596 1-120 (250)
405 KOG1163 Casein kinase (serine/ 99.3 2.7E-11 5.9E-16 116.9 10.2 134 470-612 12-147 (341)
406 KOG0986 G protein-coupled rece 99.2 6.9E-12 1.5E-16 130.4 5.9 126 473-603 185-325 (591)
407 cd05145 RIO1_like RIO kinase f 99.2 8E-11 1.7E-15 114.1 11.8 109 478-596 2-145 (190)
408 PRK10359 lipopolysaccharide co 99.2 9.6E-11 2.1E-15 115.9 11.9 114 470-596 28-162 (232)
409 KOG0695 Serine/threonine prote 99.2 1.6E-11 3.5E-16 122.9 5.7 124 474-603 251-389 (593)
410 KOG1345 Serine/threonine kinas 99.2 7.3E-12 1.6E-16 122.6 2.3 124 469-596 20-148 (378)
411 PHA02882 putative serine/threo 99.2 2.1E-10 4.5E-15 118.7 13.2 117 473-596 12-153 (294)
412 KOG1167 Serine/threonine prote 99.2 1.9E-11 4.1E-16 126.5 5.1 122 469-596 32-159 (418)
413 KOG0671 LAMMER dual specificit 99.2 3.2E-11 6.9E-16 123.4 6.4 129 470-609 86-225 (415)
414 PRK12274 serine/threonine prot 99.2 2.4E-10 5.2E-15 111.0 11.5 106 476-596 5-118 (218)
415 smart00221 STYKc Protein kinas 99.1 5.4E-10 1.2E-14 109.5 14.1 116 475-596 1-125 (225)
416 KOG0200 Fibroblast/platelet-de 99.1 1.2E-10 2.6E-15 132.5 10.5 129 473-601 296-454 (609)
417 KOG0668 Casein kinase II, alph 99.1 1.3E-11 2.7E-16 118.2 2.0 118 473-596 38-159 (338)
418 cd00180 PKc Catalytic domain o 99.1 9.4E-10 2E-14 105.6 14.3 110 481-596 1-119 (215)
419 PRK14879 serine/threonine prot 99.1 7.1E-10 1.5E-14 108.9 11.5 109 479-596 2-122 (211)
420 PLN03225 Serine/threonine-prot 99.0 5.4E-10 1.2E-14 126.0 10.3 121 473-596 132-282 (566)
421 PRK09605 bifunctional UGMP fam 99.0 1.5E-09 3.3E-14 122.0 12.6 109 475-596 335-455 (535)
422 TIGR03724 arch_bud32 Kae1-asso 99.0 1.3E-09 2.9E-14 105.9 10.7 105 480-596 1-117 (199)
423 KOG0664 Nemo-like MAPK-related 99.0 2.1E-11 4.5E-16 119.3 -2.2 114 476-596 56-183 (449)
424 KOG0614 cGMP-dependent protein 99.0 3.7E-11 8E-16 126.4 -0.7 126 475-604 422-559 (732)
425 KOG0603 Ribosomal protein S6 k 99.0 3.5E-10 7.6E-15 122.8 6.6 121 471-596 320-442 (612)
426 smart00090 RIO RIO-like kinase 99.0 8.3E-10 1.8E-14 110.8 7.9 115 474-596 29-176 (237)
427 KOG0665 Jun-N-terminal kinase 99.0 3.4E-10 7.4E-15 113.5 4.9 126 471-610 15-152 (369)
428 smart00220 S_TKc Serine/Threon 99.0 5.2E-09 1.1E-13 103.3 12.1 105 485-596 1-114 (244)
429 KOG0670 U4/U6-associated splic 98.9 1.5E-09 3.2E-14 114.8 8.0 127 473-609 432-569 (752)
430 KOG1165 Casein kinase (serine/ 98.9 4E-09 8.8E-14 106.3 10.5 126 469-596 24-151 (449)
431 cd05144 RIO2_C RIO kinase fami 98.9 4.1E-09 9E-14 102.7 9.5 108 475-596 17-152 (198)
432 KOG1164 Casein kinase (serine/ 98.9 1.1E-08 2.3E-13 107.7 12.7 119 474-596 19-149 (322)
433 KOG1166 Mitotic checkpoint ser 98.8 7.5E-09 1.6E-13 119.8 7.1 118 473-596 698-821 (974)
434 KOG1024 Receptor-like protein 98.8 9.2E-09 2E-13 105.6 6.7 123 473-596 284-423 (563)
435 COG0515 SPS1 Serine/threonine 98.8 1.1E-07 2.3E-12 97.0 14.5 123 475-610 2-135 (384)
436 COG4993 Gcd Glucose dehydrogen 98.7 1.9E-07 4.2E-12 100.6 13.7 179 47-233 213-448 (773)
437 PRK01723 3-deoxy-D-manno-octul 98.7 1.5E-07 3.2E-12 94.7 12.2 115 478-602 36-179 (239)
438 TIGR01982 UbiB 2-polyprenylphe 98.6 2E-07 4.3E-12 102.0 10.7 114 478-596 122-284 (437)
439 cd05119 RIO RIO kinase family, 98.6 2.4E-07 5.2E-12 89.0 9.7 109 478-596 2-142 (187)
440 cd05120 APH_ChoK_like Aminogly 98.6 3E-07 6.5E-12 83.8 9.2 116 478-609 3-122 (155)
441 PF01011 PQQ: PQQ enzyme repea 98.5 1.1E-07 2.5E-12 66.6 4.3 35 49-83 1-35 (38)
442 COG4993 Gcd Glucose dehydrogen 98.3 1.4E-06 3.1E-11 94.1 8.9 159 65-236 181-373 (773)
443 PRK04750 ubiB putative ubiquin 98.3 3.9E-06 8.4E-11 93.4 11.6 117 475-596 122-287 (537)
444 PF01011 PQQ: PQQ enzyme repea 98.2 1.9E-06 4E-11 60.4 3.9 33 136-168 1-33 (38)
445 PF13570 PQQ_3: PQQ-like domai 98.1 2.6E-06 5.7E-11 60.3 2.9 40 113-154 1-40 (40)
446 cd05151 ChoK Choline Kinase (C 98.0 2.8E-05 6.2E-10 73.1 9.8 115 479-610 4-122 (170)
447 smart00564 PQQ beta-propeller 97.9 1.4E-05 3E-10 53.9 4.1 32 130-161 1-32 (33)
448 smart00564 PQQ beta-propeller 97.9 1.4E-05 3.1E-10 53.8 4.0 29 47-75 5-33 (33)
449 KOG0590 Checkpoint kinase and 97.9 4.8E-06 1.1E-10 94.3 1.3 123 476-602 321-457 (601)
450 KOG1036 Mitotic spindle checkp 97.8 0.00029 6.3E-09 70.7 12.0 145 48-225 25-169 (323)
451 PLN00181 protein SPA1-RELATED; 97.7 1.4E-05 3.1E-10 94.4 2.6 73 525-609 30-113 (793)
452 KOG0296 Angio-associated migra 97.7 0.00091 2E-08 68.5 14.5 148 47-227 117-271 (399)
453 cd05146 RIO3_euk RIO kinase fa 97.7 0.00014 3.1E-09 70.6 8.4 107 479-596 3-152 (197)
454 KOG0195 Integrin-linked kinase 97.6 7.6E-06 1.7E-10 80.8 -1.1 108 475-588 192-308 (448)
455 KOG1240 Protein kinase contain 97.6 9.5E-06 2.1E-10 93.5 -1.2 119 474-596 24-147 (1431)
456 cd00200 WD40 WD40 domain, foun 97.6 0.0012 2.5E-08 65.4 14.0 151 47-227 62-215 (289)
457 PF13570 PQQ_3: PQQ-like domai 97.6 8.5E-05 1.8E-09 52.5 4.1 40 68-112 1-40 (40)
458 KOG4158 BRPK/PTEN-induced prot 97.6 7.4E-05 1.6E-09 77.7 5.2 69 524-596 273-368 (598)
459 TIGR03866 PQQ_ABC_repeats PQQ- 97.6 0.0021 4.5E-08 65.5 16.0 110 49-163 2-113 (300)
460 cd00200 WD40 WD40 domain, foun 97.6 0.00091 2E-08 66.2 13.0 148 49-228 106-258 (289)
461 KOG3087 Serine/threonine prote 97.6 0.0009 1.9E-08 63.4 11.6 125 477-606 11-154 (229)
462 cd05154 ACAD10_11_like Acyl-Co 97.5 0.00021 4.5E-09 70.1 7.0 76 479-555 4-89 (223)
463 PF14531 Kinase-like: Kinase-l 97.5 0.00043 9.3E-09 71.0 9.4 127 475-602 14-182 (288)
464 KOG0603 Ribosomal protein S6 k 97.4 3.7E-05 8.1E-10 84.3 -0.3 117 480-602 1-134 (612)
465 TIGR03866 PQQ_ABC_repeats PQQ- 97.4 0.01 2.2E-07 60.4 17.6 156 47-230 125-290 (300)
466 COG0661 AarF Predicted unusual 97.3 0.00094 2E-08 74.1 9.2 120 479-610 131-299 (517)
467 PRK15123 lipopolysaccharide co 97.1 0.0095 2.1E-07 60.9 14.1 102 494-600 42-173 (268)
468 KOG0649 WD40 repeat protein [G 97.1 0.0041 8.9E-08 60.7 10.5 194 46-284 20-237 (325)
469 KOG1235 Predicted unusual prot 97.1 0.0015 3.3E-08 72.4 8.1 118 478-610 166-335 (538)
470 COG3642 Mn2+-dependent serine/ 97.0 0.004 8.6E-08 59.3 9.5 105 480-596 3-119 (204)
471 KOG1243 Protein kinase [Genera 97.0 0.0018 3.9E-08 72.0 8.3 102 493-602 33-142 (690)
472 KOG0278 Serine/threonine kinas 97.0 0.011 2.3E-07 58.2 12.5 112 47-164 154-265 (334)
473 PLN00181 protein SPA1-RELATED; 97.0 0.012 2.7E-07 69.6 15.7 157 47-231 587-750 (793)
474 KOG0296 Angio-associated migra 96.9 0.019 4.1E-07 59.1 13.9 155 46-231 74-232 (399)
475 KOG0316 Conserved WD40 repeat- 96.9 0.0036 7.7E-08 60.9 7.7 153 47-229 112-267 (307)
476 PRK09902 hypothetical protein; 96.9 0.022 4.7E-07 55.8 13.3 123 482-609 27-172 (216)
477 PTZ00421 coronin; Provisional 96.7 0.043 9.4E-07 61.1 15.6 112 47-163 87-208 (493)
478 PF05935 Arylsulfotrans: Aryls 96.6 0.029 6.2E-07 62.4 14.0 175 46-229 112-311 (477)
479 PTZ00420 coronin; Provisional 96.6 0.057 1.2E-06 60.9 16.2 143 50-221 140-295 (568)
480 PF01163 RIO1: RIO1 family; I 96.6 0.0072 1.6E-07 58.4 7.5 100 488-596 1-134 (188)
481 TIGR02800 propeller_TolB tol-p 96.5 0.096 2.1E-06 56.8 17.3 112 43-159 196-316 (417)
482 KOG0316 Conserved WD40 repeat- 96.5 0.0066 1.4E-07 59.1 6.9 113 46-165 153-269 (307)
483 KOG0601 Cyclin-dependent kinas 96.4 0.0018 3.9E-08 71.1 2.9 122 475-601 116-258 (524)
484 TIGR02658 TTQ_MADH_Hv methylam 96.4 0.16 3.5E-06 53.8 17.4 115 47-166 11-149 (352)
485 KOG0643 Translation initiation 96.4 0.052 1.1E-06 53.9 12.4 122 47-168 63-235 (327)
486 KOG0649 WD40 repeat protein [G 96.3 0.012 2.5E-07 57.7 7.0 113 48-164 72-197 (325)
487 KOG2055 WD40 repeat protein [G 96.2 0.044 9.5E-07 58.1 11.4 149 47-223 224-378 (514)
488 KOG0601 Cyclin-dependent kinas 96.2 0.0022 4.8E-08 70.4 1.9 117 474-596 266-393 (524)
489 PF10707 YrbL-PhoP_reg: PhoP r 96.2 0.049 1.1E-06 53.1 11.1 116 478-610 6-152 (199)
490 PF06293 Kdo: Lipopolysacchari 96.2 0.041 9E-07 53.9 10.6 89 511-602 56-155 (206)
491 COG1718 RIO1 Serine/threonine 96.1 0.022 4.8E-07 56.8 8.2 118 478-604 53-205 (268)
492 PRK05137 tolB translocation pr 96.1 0.27 5.9E-06 53.9 17.8 110 46-161 211-330 (435)
493 PTZ00421 coronin; Provisional 96.1 0.14 3.1E-06 57.0 15.3 151 48-226 138-297 (493)
494 PF02239 Cytochrom_D1: Cytochr 96.0 0.024 5.2E-07 60.8 8.8 141 95-261 8-158 (369)
495 KOG0291 WD40-repeat-containing 96.0 0.067 1.5E-06 59.9 12.1 142 47-217 361-506 (893)
496 PRK04922 tolB translocation pr 96.0 0.26 5.6E-06 54.1 17.0 111 45-160 212-331 (433)
497 PRK04792 tolB translocation pr 96.0 0.26 5.7E-06 54.3 17.0 111 45-160 226-345 (448)
498 TIGR02172 Fb_sc_TIGR02172 Fibr 96.0 0.05 1.1E-06 54.2 10.2 70 479-551 7-78 (226)
499 KOG3741 Poly(A) ribonuclease s 95.9 0.037 8.1E-07 60.2 9.5 107 486-593 289-417 (655)
500 KOG1023 Natriuretic peptide re 95.9 0.01 2.3E-07 65.0 5.4 80 524-611 4-90 (484)
No 1
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-38 Score=340.21 Aligned_cols=184 Identities=24% Similarity=0.413 Sum_probs=156.1
Q ss_pred CCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHHHh
Q 007199 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~v 126 (613)
++++.+++|.| .++|.+..+|.+.|+... .|+..+..... ...|+.++.||+||.+.. .+.+.|+||+++++|
T Consensus 26 ~e~~~~~stid-~l~a~s~~~g~~~~~l~~-~pvv~~~~~~~----~~~fl~~p~dgsly~l~~-~~sL~Klpftipelv 98 (903)
T KOG1027|consen 26 DENLLLVSTID-SLHAPSSETGFIKWTLSD-DPVVASPDGVL----QPAFLPDPRDGSLYTLGN-NLSLTKLPFTIPELV 98 (903)
T ss_pred ccccccccccc-cccCccccccceeeeecc-CccccCCcccc----ccccCCCccccceeeccC-CCccccCCccchhhh
Confidence 44789999999 999999999999999964 45544422211 257899999999999977 567889999999999
Q ss_pred hhCceeecCCcEEEEeecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccccccccEEEE
Q 007199 127 RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYI 206 (613)
Q Consensus 127 ~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 206 (613)
..+||+++||++|.|++++.||.||++||+..|+|++..++ ...||+
T Consensus 99 ~~~pcrssdGi~ysg~k~d~~~lvD~~tg~~~~tf~~~~~~---------------------------------~~~v~~ 145 (903)
T KOG1027|consen 99 NASPCRSSDGILYSGSKQDIWYLVDPKTGEIDYTFNTAEPI---------------------------------KQLVYL 145 (903)
T ss_pred ccCcccCCCCeEEecccccceEEecCCccceeEEEecCCcc---------------------------------hhheec
Confidence 99999999999999999999999999999999999876532 238999
Q ss_pred EeeeeEEEEEeCCCCceEEEEEeceeeeeecccccCCCcccccccC-CCcccccc-------cCcccccccc
Q 007199 207 MRTDYVLQSTSQDSGEVLWNVAYADFKAEFRCQEVGKSFSGYHFNS-GSELGMDL-------IGDVESHLPC 270 (613)
Q Consensus 207 gr~d~~l~a~d~~~G~~~Wn~t~~~~~a~~~~~~~~~~~~~~~~~s-~~~~~~~~-------~g~~~~~~~~ 270 (613)
|||.|+|.+.|+++-...||+|+.+|.|.++.....+.++.+|.++ |+++++|. .|+..+|+.-
T Consensus 146 grt~ytv~m~d~~~~~~~wn~t~~dy~a~~~~~~~~~~~~~~~~~~~g~i~t~D~~~g~~~~~q~~~spvv~ 217 (903)
T KOG1027|consen 146 GRTNYTVTMYDKNVRGKTWNTTFGDYSAQYPSGVRGEKMSHFHSLGNGYIVTVDSESGEKLWLQDLLSPVVA 217 (903)
T ss_pred ccceeEEecccCcccCceeeccccchhccCCCccCCceeEEEeecCCccEEeccCcccceeeccccCCceEE
Confidence 9999999999999999999999999999999999988888444444 89999887 5666666554
No 2
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.86 E-value=2.7e-21 Score=197.84 Aligned_cols=115 Identities=28% Similarity=0.369 Sum_probs=99.9
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|...+.||+|+||+||+| ++.++..||||++.+. ..+.+..|+.+|+.+ +|||||+++++++.++++||||||
T Consensus 12 y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel-~H~nIV~l~d~~~~~~~i~lVMEy 90 (429)
T KOG0595|consen 12 YELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKEL-KHPNIVRLLDCIEDDDFIYLVMEY 90 (429)
T ss_pred ceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhc-CCcceeeEEEEEecCCeEEEEEEe
Confidence 888888999999999997 5788899999999875 455788999999888 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|. |||.+||+.++ .+++..+..++. .||++||+++|||||||
T Consensus 91 C~gGDLs~yi~~~~------~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLK 136 (429)
T KOG0595|consen 91 CNGGDLSDYIRRRG------RLPEATARHFMQQLASALQFLHENNIIHRDLK 136 (429)
T ss_pred CCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence 99 79999999754 455555555444 89999999999988877
No 3
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.85 E-value=1.2e-20 Score=203.91 Aligned_cols=185 Identities=17% Similarity=0.185 Sum_probs=125.5
Q ss_pred CCCCCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCc--eeecc---c--cccCCCCCeEEEecCCCCeEEEEecCCCce
Q 007199 43 PLPPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRP--IYSSY---Q--ASFNSNASEFYLDVDEDWELYFHSKRFGKM 115 (613)
Q Consensus 43 ~~~~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~--i~s~~---~--~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l 115 (613)
++.+.++.||+++.+|.|+|+|+.||+++|+++.+.. +.+.. . .......+.+|+ ++.||.||++|+++|++
T Consensus 64 sPvv~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v-~~~~g~l~ald~~tG~~ 142 (394)
T PRK11138 64 HPAVAYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYI-GSEKGQVYALNAEDGEV 142 (394)
T ss_pred ccEEECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEE-EcCCCEEEEEECCCCCC
Confidence 3457899999999999999999999999999987541 11110 0 001111234555 45699999999999999
Q ss_pred eeecccHHHHhhhCceeecCCcEEEEeecceEEEEECCCCcEEEEEecCCCC-----CCCCCcCCCCCccccCCCccccc
Q 007199 116 KKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSA-----STPGFQSDENKHVVPVDGYEELV 190 (613)
Q Consensus 116 ~~~~~~~~~~v~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 190 (613)
.|.+.++..+.++|++. |+.||+++.++.+|++|++||+++|++..+.+. .++|...++.......++....+
T Consensus 143 -~W~~~~~~~~~ssP~v~-~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a~ 220 (394)
T PRK11138 143 -AWQTKVAGEALSRPVVS-DGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSAV 220 (394)
T ss_pred -cccccCCCceecCCEEE-CCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEEE
Confidence 99999999899999999 889999999999999999999999999865321 13444332211111111100000
Q ss_pred ccc-------------------------cccccccccEEEEEeeeeEEEEEeCCCCceEEEEEec
Q 007199 191 ESG-------------------------VGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (613)
Q Consensus 191 ~~~-------------------------~~~~~~~~~~v~igr~d~~l~a~d~~~G~~~Wn~t~~ 230 (613)
++. ...|...++.||++..++.++|+|+.+|+++|+..++
T Consensus 221 d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~ 285 (394)
T PRK11138 221 LMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYG 285 (394)
T ss_pred EccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCC
Confidence 000 0112223567777777777777777777777776544
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=4.9e-20 Score=188.49 Aligned_cols=124 Identities=23% Similarity=0.201 Sum_probs=102.1
Q ss_pred cccCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc----------chHHHHHHHHHHHhcCCCCcceeEEEEEE
Q 007199 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT----------HHDVALKEIQNLIASDQHPNIVRWYGVES 537 (613)
Q Consensus 469 ~~i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~----------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~ 537 (613)
..+.+.|.+.+.||+|+||.|-+| .+.+|+.||||++.+. ......+|+++|+++ +|||||+++++|.
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL-~HP~IV~~~d~f~ 246 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKL-SHPNIVRIKDFFE 246 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhc-CCCCEEEEeeeee
Confidence 345577999999999999999998 6899999999999862 112467999999999 9999999999999
Q ss_pred eCCEEEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 538 DQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 538 ~~~~~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
..+..||||||+. |+|++++-.++ ....-.-....++++.|+.|||+++|+|||||
T Consensus 247 ~~ds~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiK 303 (475)
T KOG0615|consen 247 VPDSSYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIK 303 (475)
T ss_pred cCCceEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHHHcCcccccCC
Confidence 9999999999999 69999998654 11111224455666699999999999988876
No 5
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=2.4e-19 Score=190.25 Aligned_cols=118 Identities=25% Similarity=0.196 Sum_probs=101.1
Q ss_pred CceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-EEEEEec
Q 007199 472 GKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQD-FVYLSLE 547 (613)
Q Consensus 472 ~~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-~~~LV~E 547 (613)
.+.|...+.||+|+||.||++...+|+.||||++.... ..+|.+|+++|.++ +|||+|+|+|||.+.+ +.+||||
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l-~H~Nlv~LlGyC~e~~~~~~LVYE 152 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRL-RHPNLVKLLGYCLEGGEHRLLVYE 152 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcC-CCcCcccEEEEEecCCceEEEEEE
Confidence 35688889999999999999999999999999988733 46799999999888 8999999999999999 5999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH-----HHHHHHhcCC---ceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN-----EVRIRLLPVM---ENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~-----~~l~~Lh~~~---iiHrDlK 596 (613)
||+ |+|.++|+... .. +++|..|+-+ .||+|||... |||||||
T Consensus 153 ym~nGsL~d~L~~~~----~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiK 204 (361)
T KOG1187|consen 153 YMPNGSLEDHLHGKK----GE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIK 204 (361)
T ss_pred ccCCCCHHHHhCCCC----CC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCC
Confidence 999 99999998642 11 5589888887 8999999854 6666665
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=6.1e-19 Score=188.74 Aligned_cols=123 Identities=26% Similarity=0.279 Sum_probs=105.7
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec------cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK------THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~------~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|...+.||+|+|+.+|.+. ..+|+.||+|++.+ ..++.+.+||++.+.+ +|||||+++++|++.+++|||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L-~HpnIV~f~~~FEDs~nVYiv 96 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSL-KHPNIVQFYHFFEDSNNVYIV 96 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhc-CCCcEEeeeeEeecCCceEEE
Confidence 459999999999999999975 59999999999986 3455899999999877 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+|+|. |+|..+++.. ..+.+..++.++. .||.|||+.+||||||| ||+++.
T Consensus 97 LELC~~~sL~el~Krr------k~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~ 155 (592)
T KOG0575|consen 97 LELCHRGSLMELLKRR------KPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENM 155 (592)
T ss_pred EEecCCccHHHHHHhc------CCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcC
Confidence 99999 9999999843 2455555555544 89999999999999999 666653
No 7
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.78 E-value=4.2e-18 Score=182.77 Aligned_cols=184 Identities=17% Similarity=0.155 Sum_probs=131.5
Q ss_pred CCCCCCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeeccc
Q 007199 42 PPLPPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSS 121 (613)
Q Consensus 42 ~~~~~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~ 121 (613)
+.+.+.++.||+++.+|.|||+|+.||+++|+++.+..+.++. .. +.+.+|+ ++.||.||++|..+|++ +|...
T Consensus 59 ~~p~v~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p---~v-~~~~v~v-~~~~g~l~ald~~tG~~-~W~~~ 132 (377)
T TIGR03300 59 LQPAVAGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGV---GA-DGGLVFV-GTEKGEVIALDAEDGKE-LWRAK 132 (377)
T ss_pred cceEEECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccce---EE-cCCEEEE-EcCCCEEEEEECCCCcE-eeeec
Confidence 3456789999999999999999999999999999988776551 11 2224554 55599999999999999 99999
Q ss_pred HHHHhhhCceeecCCcEEEEeecceEEEEECCCCcEEEEEecCCCC-----CCCCCcCCCCCccccCCCcccccccc---
Q 007199 122 AEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSA-----STPGFQSDENKHVVPVDGYEELVESG--- 193 (613)
Q Consensus 122 ~~~~v~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--- 193 (613)
++..+.++|++. ++.||+++.++.+|++|++||+++|++...... .++|...++.-.....++....+++.
T Consensus 133 ~~~~~~~~p~v~-~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~~~v~~~~~~g~v~ald~~tG~ 211 (377)
T TIGR03300 133 LSSEVLSPPLVA-NGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIADGGVLVGFAGGKLVALDLQTGQ 211 (377)
T ss_pred cCceeecCCEEE-CCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEECCEEEEECCCCEEEEEEccCCC
Confidence 998888999998 888999999999999999999999999865432 12333322211111111111111110
Q ss_pred ----------------------cccccccccEEEEEeeeeEEEEEeCCCCceEEEEEecee
Q 007199 194 ----------------------VGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYADF 232 (613)
Q Consensus 194 ----------------------~~~~~~~~~~v~igr~d~~l~a~d~~~G~~~Wn~t~~~~ 232 (613)
...|...++.||++..++.|+|+|.++|+++|+.....+
T Consensus 212 ~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~ 272 (377)
T TIGR03300 212 PLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASSY 272 (377)
T ss_pred EeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCCc
Confidence 001112356788888888888888888888888765443
No 8
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.77 E-value=4.1e-18 Score=204.42 Aligned_cols=114 Identities=18% Similarity=0.209 Sum_probs=87.3
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-cc
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CS 552 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-Gs 552 (613)
+...++||+|+||.||++. ..++..||||++..... ....|++.|.++ +|||||+++++|.+.+..|+|||||+ |+
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~l~~l-~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~ 769 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-IPSSEIADMGKL-QHPNIVKLIGLCRSEKGAYLIHEYIEGKN 769 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-ccHHHHHHHhhC-CCCCcceEEEEEEcCCCCEEEEeCCCCCc
Confidence 4556789999999999985 57899999999875322 224567778777 99999999999999999999999999 79
Q ss_pred HHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHh---cCCceeeccc
Q 007199 553 LNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLL---PVMENTKDIE 596 (613)
Q Consensus 553 L~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh---~~~iiHrDlK 596 (613)
|.++++.. .......++..++.|+.||| ..+++|||+|
T Consensus 770 L~~~l~~l------~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlk 810 (968)
T PLN00113 770 LSEVLRNL------SWERRRKIAIGIAKALRFLHCRCSPAVVVGNLS 810 (968)
T ss_pred HHHHHhcC------CHHHHHHHHHHHHHHHHHhccCCCCCeecCCCC
Confidence 99999631 11111223333448999999 5677777776
No 9
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.76 E-value=2.5e-18 Score=181.43 Aligned_cols=124 Identities=23% Similarity=0.252 Sum_probs=109.7
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|+..++||+|+||.||+|. +.+|..+|+|+++++ ..+.+..|-.+|... ++|+||+||-.|++.+++|||
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~-ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV-DSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc-CCCcEEEEEEEecCCCeeEEE
Confidence 569999999999999999985 789999999999973 344678888888775 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
|||++ ||+..+|. ....++++|+..++. .|+..||+.++|||||| |++++||
T Consensus 220 MEylPGGD~mTLL~------~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GH 279 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLM------RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGH 279 (550)
T ss_pred EEecCCccHHHHHH------hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCC
Confidence 99999 69999998 455889999988887 79999999999999988 7777775
No 10
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.76 E-value=1.1e-18 Score=182.75 Aligned_cols=124 Identities=23% Similarity=0.217 Sum_probs=102.4
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccch-----HHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYL 544 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~~L 544 (613)
+.|+..+.||+|.||.||+| +..+|+.||+|+++.... ....+||.+|+++ +||||++|.+..... ..+||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l-~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRL-DHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhc-CCCcccceeeEEEecCCceEEE
Confidence 44788889999999999997 589999999999986432 2678999999888 999999999998877 68999
Q ss_pred EecCCCccHHHHHHHhcCCCccccCCHHHH---HHHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQD---SNLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 545 V~E~~~GsL~~~L~~~~~~~~~~~~~~~~~---~~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|||+-||.-++... .-.+.+.++ +++++.||+|||.++|+||||| |++.+|
T Consensus 196 VFeYMdhDL~GLl~~p-----~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G 255 (560)
T KOG0600|consen 196 VFEYMDHDLSGLLSSP-----GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG 255 (560)
T ss_pred EEecccchhhhhhcCC-----CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC
Confidence 9999999999999753 223444444 5555599999999999998888 666665
No 11
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=99.75 E-value=7.8e-18 Score=181.89 Aligned_cols=179 Identities=12% Similarity=0.137 Sum_probs=132.4
Q ss_pred CCCCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHH
Q 007199 44 LPPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAE 123 (613)
Q Consensus 44 ~~~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~ 123 (613)
+.+.++.||+++.+|.|||+|+.||+++|+++.++++.+++. ..+ +.+|+ ++.||.||++|+++|++ .|.++..
T Consensus 116 ~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~---v~~-~~v~v-~~~~g~l~ald~~tG~~-~W~~~~~ 189 (394)
T PRK11138 116 VTVAGGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPV---VSD-GLVLV-HTSNGMLQALNESDGAV-KWTVNLD 189 (394)
T ss_pred cEEECCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCE---EEC-CEEEE-ECCCCEEEEEEccCCCE-eeeecCC
Confidence 345789999999999999999999999999999888776622 111 23454 55599999999999999 9999765
Q ss_pred HH-----hhhCceeecCCcEEEEeecceEEEEECCCCcEEEEEecCCC-----------CCCCCCcCCCCCccccCCCcc
Q 007199 124 EY-----IRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFS-----------ASTPGFQSDENKHVVPVDGYE 187 (613)
Q Consensus 124 ~~-----v~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 187 (613)
.. ..++|++. ++.+|+|+.++.++++|+.||+++|++....+ ..++|+..++.-+.+..++..
T Consensus 190 ~~~~~~~~~~sP~v~-~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l 268 (394)
T PRK11138 190 VPSLTLRGESAPATA-FGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNL 268 (394)
T ss_pred CCcccccCCCCCEEE-CCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeE
Confidence 32 24789998 77899999999999999999999999875432 124555444333322223333
Q ss_pred ccccccccc------------ccccccEEEEEeeeeEEEEEeCCCCceEEEEEe
Q 007199 188 ELVESGVGN------------LKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAY 229 (613)
Q Consensus 188 ~~~~~~~~~------------~~~~~~~v~igr~d~~l~a~d~~~G~~~Wn~t~ 229 (613)
.+++...-. +...++.||++..|+.|+|+|+++|+++|+...
T Consensus 269 ~ald~~tG~~~W~~~~~~~~~~~~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~ 322 (394)
T PRK11138 269 VALDLRSGQIVWKREYGSVNDFAVDGGRIYLVDQNDRVYALDTRGGVELWSQSD 322 (394)
T ss_pred EEEECCCCCEEEeecCCCccCcEEECCEEEEEcCCCeEEEEECCCCcEEEcccc
Confidence 333322111 112467999999999999999999999998653
No 12
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.75 E-value=6.9e-18 Score=171.49 Aligned_cols=124 Identities=23% Similarity=0.134 Sum_probs=105.8
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|++.++||+|+||+||.+ ...+++.+|+|.|++. ..+...+|..+|.+. +||.||+++-.|++.+.+|||
T Consensus 25 ~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v-~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 25 DDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKI-KHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhC-CCCcEeeeEEecccCCeEEEE
Confidence 45999999999999999996 4788999999999872 345788999999886 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
+||+. |+|+.+|++. ..+.++.+.-+++ .||.|||+++|||||+| ||+.+||
T Consensus 104 ld~~~GGeLf~hL~~e------g~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GH 163 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQRE------GRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGH 163 (357)
T ss_pred EeccCCccHHHHHHhc------CCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCc
Confidence 99999 6999999854 4566776666666 89999999999998887 5555554
No 13
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.74 E-value=1.6e-18 Score=182.89 Aligned_cols=122 Identities=20% Similarity=0.159 Sum_probs=105.1
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccchH-----HHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~~-----~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
.|.+.+.||+|+||.|||+ ++++.+.||+|.+.+..+. .+.+|++++.++ +|||||.++++|+...++++|.|
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~l-kHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSL-KHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhc-CCcchhhHHHhhcccceEEEEeh
Confidence 3778889999999999997 5788999999999875443 489999999888 99999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccceecCCCcCcceee
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlKllh~dg~PsniLl 609 (613)
||.|+|..+|... ..++++.+..+.. .||.|||+.+|+|| |++|+||||
T Consensus 82 ~a~g~L~~il~~d------~~lpEe~v~~~a~~LVsaL~yLhs~rilhr-------d~kPqniLl 133 (808)
T KOG0597|consen 82 YAVGDLFTILEQD------GKLPEEQVRAIAYDLVSALYYLHSNRILHR-------DMKPQNILL 133 (808)
T ss_pred hhhhhHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHhcCcccc-------cCCcceeee
Confidence 9999999999854 4677877777666 89999999999655 556777776
No 14
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.74 E-value=9.5e-18 Score=170.54 Aligned_cols=121 Identities=21% Similarity=0.227 Sum_probs=100.2
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-EEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK----THHDVALKEIQNLIASDQHPNIVRWYGVESDQD-FVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-~~~LV~E~ 548 (613)
++..++||+|..|+|||+ ++.+++.+|+|.+.. +...++.+|++++.+. +||+||++||+|..+. .++|+|||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~-~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSC-QSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhC-CCCCeeeEeEEEEeCCceEEeehhh
Confidence 677889999999999997 689999999999953 3445889999999988 9999999999999999 59999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhc-CCceeeccceecCCCcCcceee
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLP-VMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~-~~iiHrDlKllh~dg~PsniLl 609 (613)
|. |||.++++.. ..+++....++.. +||.|||. .+|||||| ||||||+
T Consensus 160 MDgGSLd~~~k~~------g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDI-------KPsNlLv 212 (364)
T KOG0581|consen 160 MDGGSLDDILKRV------GRIPEPVLGKIARAVLRGLSYLHEERKIIHRDI-------KPSNLLV 212 (364)
T ss_pred cCCCCHHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhhccCeeeccC-------CHHHeee
Confidence 99 7999999853 3456655555544 99999995 77766555 5777766
No 15
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.74 E-value=1.9e-18 Score=170.59 Aligned_cols=122 Identities=22% Similarity=0.226 Sum_probs=99.7
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccch-----HHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|+...++|+|+||.|||| .+.+|+.||||++..+.. +-..+||++|+++ +|+|+|.|+++|.....++||+||
T Consensus 4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqL-kH~NLVnLiEVFrrkrklhLVFE~ 82 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQL-KHENLVNLIEVFRRKRKLHLVFEY 82 (396)
T ss_pred HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhc-ccchHHHHHHHHHhcceeEEEeee
Confidence 667778999999999998 489999999999986433 2578999999888 999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccceecCCCcCcceee
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlKllh~dg~PsniLl 609 (613)
|+-++.+-|... ...++...+..++. .|++|+|++++|||||| |+|||+
T Consensus 83 ~dhTvL~eLe~~-----p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIK-------PENILi 134 (396)
T KOG0593|consen 83 CDHTVLHELERY-----PNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIK-------PENILI 134 (396)
T ss_pred cchHHHHHHHhc-----cCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCC-------hhheEE
Confidence 998877777764 33455555544443 89999999999887765 666655
No 16
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.73 E-value=5e-18 Score=165.05 Aligned_cols=123 Identities=20% Similarity=0.195 Sum_probs=100.3
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccch-----HHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+|...+.||+|.||.||+| +..+|+.||||+++.... -...+||..|+.+ +|+||+.++++|-..+.+.||+|
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel-~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQEL-KHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHc-cCcchhhhhhhccCCCceEEEEE
Confidence 3677789999999999997 588999999999986322 2688999999888 99999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||+-+|...|+... -.+.-..+..+ ...|++|||++.|+|||+| |+..||
T Consensus 82 fm~tdLe~vIkd~~-----i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g 138 (318)
T KOG0659|consen 82 FMPTDLEVVIKDKN-----IILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG 138 (318)
T ss_pred eccccHHHHhcccc-----cccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC
Confidence 99999999998642 23333333333 3389999999999888877 445444
No 17
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.73 E-value=2.1e-17 Score=174.66 Aligned_cols=116 Identities=22% Similarity=0.241 Sum_probs=95.9
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcE-EEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-EEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRS-VAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQD-FVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~-VAVK~l~~~~-----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-~~~LV~E 547 (613)
+...+.||+|+||+||+ ..+.|+. ||||++.... .+.|.+|+.+|.++ +|||||+++|+|.... ..+||||
T Consensus 43 l~~~~~iG~G~~g~V~~-~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l-~HpNIV~f~G~~~~~~~~~~iVtE 120 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYK-GKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRL-RHPNIVQFYGACTSPPGSLCIVTE 120 (362)
T ss_pred hhhhhhcccCCceeEEE-EEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCceEEEEE
Confidence 55666799999999997 5667777 9999998633 45899999999887 9999999999999988 7999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCC-ceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVM-ENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~-iiHrDlK 596 (613)
||+ |+|.++|+.. ....++.....+++. .||.|||+.+ |||||||
T Consensus 121 y~~~GsL~~~l~~~----~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK 170 (362)
T KOG0192|consen 121 YMPGGSLSVLLHKK----RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLK 170 (362)
T ss_pred eCCCCcHHHHHhhc----ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccC
Confidence 999 8999999874 233455555555554 8999999999 8888777
No 18
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.73 E-value=9.9e-18 Score=176.89 Aligned_cols=125 Identities=26% Similarity=0.289 Sum_probs=104.8
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
..|.+++.||+|+|++|++| .+.+++.+|||++.+. ..+-+.+|-.+|.++-.||.|++|+..|.+...+|+|
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv 152 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV 152 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence 45999999999999999998 5889999999998863 2335667777888887999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
+||++ |+|.++|++.+ .+.+.+...+.. .++.|||+.+||||||| ||++|||
T Consensus 153 Le~A~nGdll~~i~K~G------sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmh 212 (604)
T KOG0592|consen 153 LEYAPNGDLLDLIKKYG------SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGH 212 (604)
T ss_pred EEecCCCcHHHHHHHhC------cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCc
Confidence 99999 89999999653 566666655554 89999999999998887 5555554
No 19
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=99.73 E-value=3.7e-17 Score=181.06 Aligned_cols=184 Identities=14% Similarity=0.144 Sum_probs=125.4
Q ss_pred CCCCCCCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCc-eeecccc---ccC-CCCCeEEEecCCCCeEEEEecCCCce
Q 007199 41 PPPLPPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRP-IYSSYQA---SFN-SNASEFYLDVDEDWELYFHSKRFGKM 115 (613)
Q Consensus 41 ~~~~~~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~-i~s~~~~---~~~-~~~~~~~i~~~~DG~lY~~~~~~G~l 115 (613)
...+.+.++.||+++.||.|||||+.||+++|+++++.+ ..++... +.. .+.+.+|+ ++.||.||++|++||++
T Consensus 54 ~~sPvv~~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v-~~~~g~v~AlD~~TG~~ 132 (488)
T cd00216 54 EGTPLVVDGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFF-GTFDGRLVALDAETGKQ 132 (488)
T ss_pred ccCCEEECCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEE-ecCCCeEEEEECCCCCE
Confidence 334557899999999999999999999999999987654 2111000 001 11123454 55599999999999999
Q ss_pred eeecccHHHH------hhhCceeecCCcEEEEee---------cceEEEEECCCCcEEEEEecCCCCC-CCCCcCCCCCc
Q 007199 116 KKLSSSAEEY------IRRMPYISKDGGVTLGAM---------KTSVFLVDVKSGRVVDNYVLDFSAS-TPGFQSDENKH 179 (613)
Q Consensus 116 ~~~~~~~~~~------v~~sP~~~~dg~v~~Gs~---------~~~~~~vD~~tG~~~~~~~~~~~~~-~~~~~~~~~~~ 179 (613)
+|.+.+... +.++|++. ++.||+|+. ++.+||+|++||+++|++....... ..+.......
T Consensus 133 -~W~~~~~~~~~~~~~i~ssP~v~-~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~- 209 (488)
T cd00216 133 -VWKFGNNDQVPPGYTMTGAPTIV-KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQ- 209 (488)
T ss_pred -eeeecCCCCcCcceEecCCCEEE-CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcc-
Confidence 999998765 78999999 899999974 6789999999999999998753211 1111100000
Q ss_pred cccCCCcccccccccccccccccEEEEEeeee------------------EEEEEeCCCCceEEEEEece
Q 007199 180 VVPVDGYEELVESGVGNLKRIRQLVYIMRTDY------------------VLQSTSQDSGEVLWNVAYAD 231 (613)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~v~igr~d~------------------~l~a~d~~~G~~~Wn~t~~~ 231 (613)
.|...+.. .-.+...++ ..++||+|..+. .|+|+|.+||+++|.+....
T Consensus 210 ~~~~~g~~-vw~~pa~d~--~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~ 276 (488)
T cd00216 210 MWGPGGGT-SWASPTYDP--KTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTP 276 (488)
T ss_pred eecCCCCC-ccCCeeEeC--CCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCC
Confidence 00000000 000111111 256999998664 89999999999999987653
No 20
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.72 E-value=1.2e-18 Score=181.20 Aligned_cols=126 Identities=23% Similarity=0.376 Sum_probs=103.0
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc--hH--HHHHHHHHHHhcCCCCcceeEEEEEEeCC-EEEEEe
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH--HD--VALKEIQNLIASDQHPNIVRWYGVESDQD-FVYLSL 546 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~--~~--~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-~~~LV~ 546 (613)
++|...+.||.|+||.||+|. ..+|..||||+|++.. .+ .=.||+..|.++-.|||||++++.+.+.+ .+|+||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 558889999999999999984 7889999999999732 23 34689999999933999999999999988 999999
Q ss_pred cCCCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccceecCCCcCcceeee
Q 007199 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610 (613)
Q Consensus 547 E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlKllh~dg~PsniLlk 610 (613)
|||..+|+++++.++ ..+++..+..++ ++||.|+|++|+.|||+| |+|||++
T Consensus 90 E~Md~NLYqLmK~R~-----r~fse~~irnim~QilqGL~hiHk~GfFHRDlK-------PENiLi~ 144 (538)
T KOG0661|consen 90 EFMDCNLYQLMKDRN-----RLFSESDIRNIMYQILQGLAHIHKHGFFHRDLK-------PENILIS 144 (538)
T ss_pred HhhhhhHHHHHhhcC-----CcCCHHHHHHHHHHHHHHHHHHHhcCcccccCC-------hhheEec
Confidence 999999999999753 345555554444 499999999999877665 6666654
No 21
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.72 E-value=6.6e-17 Score=173.53 Aligned_cols=179 Identities=16% Similarity=0.189 Sum_probs=129.5
Q ss_pred CCCCCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccH
Q 007199 43 PLPPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSA 122 (613)
Q Consensus 43 ~~~~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~ 122 (613)
.+++.++.+|+++.||.|||+|..||+++|++..++.+.++.. .. .+.+|+ ++.||.||++|.++|++ +|.+..
T Consensus 100 ~p~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~p~---v~-~~~v~v-~~~~g~l~a~d~~tG~~-~W~~~~ 173 (377)
T TIGR03300 100 GVGADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSEVLSPPL---VA-NGLVVV-RTNDGRLTALDAATGER-LWTYSR 173 (377)
T ss_pred ceEEcCCEEEEEcCCCEEEEEECCCCcEeeeeccCceeecCCE---EE-CCEEEE-ECCCCeEEEEEcCCCce-eeEEcc
Confidence 3456889999999999999999999999999998887766521 11 123454 45599999999999999 998877
Q ss_pred HHHh-----hhCceeecCCcEEEEeecceEEEEECCCCcEEEEEecCCC-----------CCCCCCcCCCCCccccCCCc
Q 007199 123 EEYI-----RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFS-----------ASTPGFQSDENKHVVPVDGY 186 (613)
Q Consensus 123 ~~~v-----~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~ 186 (613)
.... .++|++. |+.+|+|+.++.++++|++||+++|++....+ ..++|...++.-+....++.
T Consensus 174 ~~~~~~~~~~~sp~~~-~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~ 252 (377)
T TIGR03300 174 VTPALTLRGSASPVIA-DGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGR 252 (377)
T ss_pred CCCceeecCCCCCEEE-CCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCE
Confidence 6432 3688888 78899999999999999999999999865322 12234333322222222222
Q ss_pred ccccccc------------cccccccccEEEEEeeeeEEEEEeCCCCceEEEEE
Q 007199 187 EELVESG------------VGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVA 228 (613)
Q Consensus 187 ~~~~~~~------------~~~~~~~~~~v~igr~d~~l~a~d~~~G~~~Wn~t 228 (613)
..+++.. ...+...++.||++..|+.|+|+|.++|+++|+.+
T Consensus 253 l~a~d~~tG~~~W~~~~~~~~~p~~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~ 306 (377)
T TIGR03300 253 VAALDLRSGRVLWKRDASSYQGPAVDDNRLYVTDADGVVVALDRRSGSELWKND 306 (377)
T ss_pred EEEEECCCCcEEEeeccCCccCceEeCCEEEEECCCCeEEEEECCCCcEEEccc
Confidence 2222221 11122246799999999999999999999999874
No 22
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.72 E-value=4e-18 Score=173.44 Aligned_cols=123 Identities=21% Similarity=0.274 Sum_probs=103.5
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccch------HHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~------~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
-+|++.+.||+|.||+|-++ ....|+.||||.|++... -.+.+||++|..+ +||||+.+|++|+..+.+.||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsL-NHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSL-NHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhc-CCCceeehhhhhcCCceEEEE
Confidence 34888999999999999997 468899999999987322 2578999999877 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||.. |.|+||+..++ .+++..+.+++ ..|++|+|.++++||||| ||+.|+
T Consensus 132 MEYaS~GeLYDYiSer~------~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~ 190 (668)
T KOG0611|consen 132 MEYASGGELYDYISERG------SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN 190 (668)
T ss_pred EEecCCccHHHHHHHhc------cccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC
Confidence 99999 79999998764 34455554444 489999999999999999 566554
No 23
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=99.70 E-value=1.7e-16 Score=175.84 Aligned_cols=163 Identities=14% Similarity=0.109 Sum_probs=117.6
Q ss_pred CCC-CEEEEEecCCcEEEEeCCCCeeeEEeeCCCc------eeeccccccCCCCCeEEEec--------CCCCeEEEEec
Q 007199 46 PEP-DVALVAALDGTIHLVDTKLGKIRWSFGTGRP------IYSSYQASFNSNASEFYLDV--------DEDWELYFHSK 110 (613)
Q Consensus 46 ~~~-~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~------i~s~~~~~~~~~~~~~~i~~--------~~DG~lY~~~~ 110 (613)
+.+ +.||+++.||.|||+|++||+++|+++.++. +.+++. -.+ +.+|+.. ..+|.||++|+
T Consensus 107 ~~~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~---v~~-~~v~vg~~~~~~~~~~~~g~v~alD~ 182 (488)
T cd00216 107 YWDPRKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPT---IVK-KLVIIGSSGAEFFACGVRGALRAYDV 182 (488)
T ss_pred EccCCeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCE---EEC-CEEEEeccccccccCCCCcEEEEEEC
Confidence 446 9999999999999999999999999998876 344311 111 2344443 23789999999
Q ss_pred CCCceeeecccHHH---------------------HhhhCceee-cCCcEEEEeecc------------------eEEEE
Q 007199 111 RFGKMKKLSSSAEE---------------------YIRRMPYIS-KDGGVTLGAMKT------------------SVFLV 150 (613)
Q Consensus 111 ~~G~l~~~~~~~~~---------------------~v~~sP~~~-~dg~v~~Gs~~~------------------~~~~v 150 (613)
.||++ +|.+.+.. .|.++|++. .+|.||+|+-++ ++|||
T Consensus 183 ~TG~~-~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Al 261 (488)
T cd00216 183 ETGKL-LWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVAL 261 (488)
T ss_pred CCCce-eeEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEE
Confidence 99999 99987741 245577875 468899998664 89999
Q ss_pred ECCCCcEEEEEecCCC------CCCCCCcCCCCCccccCCCcccccccccccccccccEEEEEeeeeEEEEEeCCCCceE
Q 007199 151 DVKSGRVVDNYVLDFS------ASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVL 224 (613)
Q Consensus 151 D~~tG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~igr~d~~l~a~d~~~G~~~ 224 (613)
|++||+++|++..... ..++|...+ ....+. .....||++..++.|+|+|++||+++
T Consensus 262 d~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~----------------~~~~~g-~~~~~V~~g~~~G~l~ald~~tG~~~ 324 (488)
T cd00216 262 DADTGKVKWFYQTTPHDLWDYDGPNQPSLAD----------------IKPKDG-KPVPAIVHAPKNGFFYVLDRTTGKLI 324 (488)
T ss_pred cCCCCCEEEEeeCCCCCCcccccCCCCeEEe----------------ccccCC-CeeEEEEEECCCceEEEEECCCCcEe
Confidence 9999999999975421 011111000 000000 01136999999999999999999999
Q ss_pred EEEEec
Q 007199 225 WNVAYA 230 (613)
Q Consensus 225 Wn~t~~ 230 (613)
|.....
T Consensus 325 W~~~~~ 330 (488)
T cd00216 325 SARPEV 330 (488)
T ss_pred eEeEee
Confidence 998776
No 24
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.70 E-value=1.4e-16 Score=168.86 Aligned_cols=122 Identities=24% Similarity=0.190 Sum_probs=101.0
Q ss_pred ceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
+.+.+.+.||+|.||.|.+|....+..||||.++.. .+.+|.+|+++|.++ +|||||+++|+|..++.+++|+||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqL-khPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRL-KHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhcc-CCCCeeEEEeeeecCCchHHHHHH
Confidence 457889999999999999998888899999999973 335899999999999 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
|+ |+|.+||..+.... ......--+...+..||+||.+.+++|||+-
T Consensus 617 mEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLes~nfVHrd~a 664 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLESLNFVHRDLA 664 (807)
T ss_pred HhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHHhhchhhcccc
Confidence 99 99999999874211 1111222233444489999999999998886
No 25
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.70 E-value=6.8e-17 Score=166.20 Aligned_cols=122 Identities=28% Similarity=0.276 Sum_probs=102.7
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCC--EEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQD--FVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~--~~~LV~E~ 548 (613)
+...+.||+|+||.||++. ..+|+.+|||.+.... .+.+.+|+++|.++ +|||||+++|.....+ .++|.|||
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l-~~p~IV~~~G~~~~~~~~~~~i~mEy 97 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRL-NHPNIVQYYGSSSSRENDEYNIFMEY 97 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhC-CCCCEEeeCCccccccCeeeEeeeec
Confidence 6778899999999999974 5569999999988754 45689999999998 7999999999866555 69999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccceecCCCcCcceee
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlKllh~dg~PsniLl 609 (613)
++ |+|.+++...+ . .+++..+.++.. +||.|||+++++||||| |+||||
T Consensus 98 ~~~GsL~~~~~~~g----~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK-------~~NiLl 150 (313)
T KOG0198|consen 98 APGGSLSDLIKRYG----G-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIK-------PANILL 150 (313)
T ss_pred cCCCcHHHHHHHcC----C-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcc-------cceEEE
Confidence 99 79999999753 2 577777766665 99999999999999888 666665
No 26
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.69 E-value=2.7e-16 Score=162.72 Aligned_cols=125 Identities=21% Similarity=0.176 Sum_probs=108.2
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+.|++.++||.|..++||+| .+..++.||||++..+ ..+.+.+|++.|..+ +||||++++..|..+.++|+||.
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~-~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLI-DHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhc-CCCCcceEEEEEEecceeEEeeh
Confidence 45999999999999999997 4788899999999863 346889999888555 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||. ||+.++++.. -...+.+..++.++. .||.|||+++-||||+| |++.||
T Consensus 105 fMa~GS~ldIik~~----~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG 163 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTY----YPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDG 163 (516)
T ss_pred hhcCCcHHHHHHHH----ccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCC
Confidence 999 8999999976 344466666666555 89999999999999999 888887
No 27
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.69 E-value=5.3e-17 Score=162.35 Aligned_cols=122 Identities=24% Similarity=0.223 Sum_probs=97.4
Q ss_pred cccCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccchH-----HHHHHHHHHHhcCCCCcceeEEEEEEeC--C
Q 007199 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQ--D 540 (613)
Q Consensus 469 ~~i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~~-----~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~ 540 (613)
.+--+.|+..+.|++|+||.||++ +..+++.||+|+++.+..+ ...+||.+|.+. +|||||.+....... +
T Consensus 72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~-~H~NIV~vkEVVvG~~~d 150 (419)
T KOG0663|consen 72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKA-RHPNIVEVKEVVVGSNMD 150 (419)
T ss_pred cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhc-CCCCeeeeEEEEeccccc
Confidence 333355888999999999999997 5889999999999864322 568999999888 999999999988754 4
Q ss_pred EEEEEecCCCccHHHHHHHhcCCCccccCCHHHH---HHHHHHHHHHHhcCCceeeccc
Q 007199 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQD---SNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 ~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~---~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
.+|||||||+-||..+++.-+ ..+....+ +.++..|++|||.+.|+|||||
T Consensus 151 ~iy~VMe~~EhDLksl~d~m~-----q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK 204 (419)
T KOG0663|consen 151 KIYIVMEYVEHDLKSLMETMK-----QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLK 204 (419)
T ss_pred eeeeeHHHHHhhHHHHHHhcc-----CCCchHHHHHHHHHHHHHHHHHhhceeEecccc
Confidence 899999999999999998743 23333333 3334489999999999887776
No 28
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.69 E-value=1.1e-16 Score=172.01 Aligned_cols=122 Identities=25% Similarity=0.294 Sum_probs=100.0
Q ss_pred EEEeeeEeecCceEEEEEEeeC--C---cEEEEEEeec------cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYE--G---RSVAVKRLVK------THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~--g---~~VAVK~l~~------~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
..+.+.||+|+||.||+|.... + ..||||..+. ....++.+|.++|..+ +|||||++||++....++|
T Consensus 159 v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l-~H~NVVr~yGVa~~~~Pl~ 237 (474)
T KOG0194|consen 159 IELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQL-NHPNVVRFYGVAVLEEPLM 237 (474)
T ss_pred ccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCccE
Confidence 5566899999999999985322 2 2389998884 2344899999999886 9999999999999999999
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||||+|. |+|.++|+... ..++...-.+++. .||.|||++++|||||- |++.+.
T Consensus 238 ivmEl~~gGsL~~~L~k~~-----~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~ 299 (474)
T KOG0194|consen 238 LVMELCNGGSLDDYLKKNK-----KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG 299 (474)
T ss_pred EEEEecCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC
Confidence 9999999 69999999753 2455555555555 89999999999999998 777754
No 29
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=3.1e-18 Score=167.53 Aligned_cols=126 Identities=24% Similarity=0.306 Sum_probs=104.3
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeEEE-EEEeCCE-EEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYG-VESDQDF-VYLS 545 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~-----~~~~~~~~Ei~~L~~l~~HpnIV~l~g-~~~~~~~-~~LV 545 (613)
.|++.++||+|+||+|||+ .+.+|..||.|.+.- ..++.+..|+.+|+++ +|||||++++ .+.++.+ ++||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL-~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQL-NHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhc-CCchHHHHHHHhhhccchhhHHH
Confidence 3888999999999999997 689999999998874 3455788999999888 9999999998 5555555 9999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhc--CC--ceeeccc----eecCCC
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLP--VM--ENTKDIE----LWKANG 602 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~--~~--iiHrDlK----llh~dg 602 (613)
||||. |||.+.|+..+. ....+++..+.+++. .||.++|. .. |+||||| |+..+|
T Consensus 99 mE~c~~GDLsqmIk~~K~--qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~g 165 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKK--QKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANG 165 (375)
T ss_pred HHhhcccCHHHHHHHHHh--ccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCC
Confidence 99999 899999998653 456678877777766 89999999 44 7788777 666666
No 30
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=1.7e-17 Score=159.23 Aligned_cols=119 Identities=24% Similarity=0.217 Sum_probs=96.3
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|+.++.||+|.||.||.+. ..++-.||+|.+.++. ..++.+|+++-..+ +||||+++|++|.+...+||+
T Consensus 22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L-~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHL-RHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeeccc-CCccHHhhhhheeccceeEEE
Confidence 348899999999999999974 7778899999998732 33788999877666 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHH---HHHHHHHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQD---SNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~---~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+||.+ |+|+..|+..+ ...+.+... .+.+..|+.|+|.+++||||||
T Consensus 101 lEya~~gel~k~L~~~~----~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiK 151 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGR----MKRFDEQRAATYIKQLANALLYCHLKRVIHRDIK 151 (281)
T ss_pred EEecCCchHHHHHHhcc----cccccccchhHHHHHHHHHHHHhccCCcccCCCC
Confidence 99999 89999999543 222333333 3344489999999999887765
No 31
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.68 E-value=2.9e-17 Score=178.40 Aligned_cols=134 Identities=24% Similarity=0.287 Sum_probs=113.2
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCC------EEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK----THHDVALKEIQNLIASDQHPNIVRWYGVESDQD------FVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~------~~~ 543 (613)
+...+.||+|+||.||+++ ..+|+.||||.++. ...+.+.+|+++|+++ +|+|||++++.-.+.. ...
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKL-nh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKL-NHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHc-CchhhhhhcccCCccccCcccccce
Confidence 6678899999999999985 89999999998886 4566889999999999 8999999999876543 678
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc---eecCCCcCcceeeecc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE---LWKANGHPSAQLLKVT 612 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK---llh~dg~PsniLlkl~ 612 (613)
+|||||. |||...|+... ....+++..+..++. .||+|||.++|+||||| ++--.|.|+-.+-||.
T Consensus 94 lvmEyC~gGsL~~~L~~PE---N~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLt 166 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPE---NAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLT 166 (732)
T ss_pred EEEeecCCCcHHHHhcCcc---cccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeee
Confidence 9999999 79999998754 455677777766665 89999999999999998 6667777777777764
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.68 E-value=3.4e-16 Score=166.64 Aligned_cols=123 Identities=23% Similarity=0.294 Sum_probs=100.8
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----c---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----H---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
..|...+.||+|+||+|+.+ ...+++.||+|.+.++ . .+.+.+|+.++.++..||||+++++++.....+|
T Consensus 17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ 96 (370)
T KOG0583|consen 17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY 96 (370)
T ss_pred CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence 34899999999999999998 5788999999977763 1 3356789999988833999999999999999999
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCC
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKAN 601 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~d 601 (613)
+|||||. |+|++++.... .+.+..+.++ ++.|+.|||+.+|+||||| |+..+
T Consensus 97 ivmEy~~gGdL~~~i~~~g------~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~ 156 (370)
T KOG0583|consen 97 IVMEYCSGGDLFDYIVNKG------RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGN 156 (370)
T ss_pred EEEEecCCccHHHHHHHcC------CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCC
Confidence 9999999 69999999732 3444444444 4499999999999999998 55444
No 33
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.68 E-value=6.7e-17 Score=171.33 Aligned_cols=123 Identities=23% Similarity=0.221 Sum_probs=100.4
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-c
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-C 551 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-G 551 (613)
+.+.+.||+|.||.|+.+.......||+|.++.. ..+.|.+|+++|+++ +|+|||+++++|..++.+|||||||+ |
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L-~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKL-RHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhC-cccCeEEEEEEEecCCceEEEEEecccC
Confidence 6678899999999999965444458999999872 446899999999998 99999999999999999999999999 9
Q ss_pred cHHHHHHHhcCCCccccCCHH---HHHHHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 552 SLNDLIYVLSGSFEEQLNAKE---QDSNLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~---~~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+|.++|+... ...+... .+...+++||+||+++++|||||- |+..++
T Consensus 287 sLl~yLr~~~----~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~ 340 (468)
T KOG0197|consen 287 SLLDYLRTRE----GGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL 340 (468)
T ss_pred cHHHHhhhcC----CCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc
Confidence 9999999732 2233333 334444499999999999999997 665554
No 34
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.68 E-value=7.4e-17 Score=165.54 Aligned_cols=126 Identities=20% Similarity=0.161 Sum_probs=107.0
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|+..+.||+|.-|+||+++ ..++..+|+|.|.++. ...++.|-+||..+ +||.++.||+.|+.+++.||+
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~l-DHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLL-DHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhc-CCCccchhhheeeccceeEEE
Confidence 458888999999999999986 5566899999999732 22567777889777 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
||||+ |+|..+++++ ....+++..+..++. .||+|||..+||.|||| |++.|||
T Consensus 156 meyCpGGdL~~LrqkQ----p~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGH 217 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQ----PGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGH 217 (459)
T ss_pred EecCCCccHHHHHhhC----CCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCc
Confidence 99999 6999998875 566777777666665 79999999999999998 7788775
No 35
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.67 E-value=7.9e-16 Score=165.11 Aligned_cols=122 Identities=22% Similarity=0.186 Sum_probs=99.0
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.+.||+|+||+||++ ...+++.||||.+.+. ..+.+.+|++++.++ +||||+++++++.+.++.||||
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES-DSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCeeEEEE
Confidence 4788999999999999997 4678999999998752 234678899988777 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||+ |+|.+++...+ .+++..+..+ ++.||.|||+.+|+||||| |++.++
T Consensus 81 E~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~ 138 (377)
T cd05629 81 EFLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG 138 (377)
T ss_pred eCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC
Confidence 9999 69999997532 3444444433 3389999999999888887 555544
No 36
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.66 E-value=4.6e-16 Score=160.87 Aligned_cols=130 Identities=23% Similarity=0.249 Sum_probs=106.3
Q ss_pred cccccCceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeeccchHHHHHHHHHHHh-cCCCCcceeEEEEEEeCC----E
Q 007199 467 DGRRIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIA-SDQHPNIVRWYGVESDQD----F 541 (613)
Q Consensus 467 ~~~~i~~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~-l~~HpnIV~l~g~~~~~~----~ 541 (613)
..+.+.+...+.+.||+|.||.||+ +.+.|+.||||++...+.+.+.+|.++.+. +++|+||+.+++.-..++ +
T Consensus 205 VQRTiarqI~L~e~IGkGRyGEVwr-G~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 205 VQRTIARQIVLQEIIGKGRFGEVWR-GRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred hHHhhhheeEEEEEecCccccceee-ccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 4456777789999999999999998 678899999999998888889999988776 379999999999877554 7
Q ss_pred EEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhc--------CCceeeccc----eecCCCcC
Q 007199 542 VYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLP--------VMENTKDIE----LWKANGHP 604 (613)
Q Consensus 542 ~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~--------~~iiHrDlK----llh~dg~P 604 (613)
++||.||.+ |||+|||... .+..+-+.++.. .||.|||. ..|.||||| |+++||-+
T Consensus 284 LwLvTdYHe~GSL~DyL~r~-------tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C 355 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN-------TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC 355 (513)
T ss_pred EEEeeecccCCcHHHHHhhc-------cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcE
Confidence 999999999 9999999853 455555555555 89999995 357788887 66666644
No 37
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.66 E-value=3.3e-16 Score=173.88 Aligned_cols=122 Identities=25% Similarity=0.252 Sum_probs=97.8
Q ss_pred eEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
..++.+.||+|+||+||+++. .+...||||.++.. ...+|++|++.|..+ +|||||+|+|.|...+++|
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l-~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAEL-QHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhc-cCCCeEEEEEEEccCCeeE
Confidence 377888999999999999742 33457999999973 345899999999888 9999999999999999999
Q ss_pred EEecCCC-ccHHHHHHHhcCCCc--------cccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFE--------EQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~--------~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+|+|||. |||.+||+.+..... ...+...+.. .++..||.||.++.++||||-
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLA 630 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLA 630 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchh
Confidence 9999999 999999998653211 1113333333 333389999999999999996
No 38
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.66 E-value=1.1e-15 Score=163.22 Aligned_cols=123 Identities=20% Similarity=0.154 Sum_probs=100.9
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|+..+.||+|+||+||++ ...+++.||||++++. ....+.+|+.++.++ +||||+++++.+.+.+.+||||
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~-~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEA-DSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCeEEEEE
Confidence 4788999999999999997 4677899999999852 223677899888887 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
|||+ |+|.+++.... .+++..+..++. .||.|||+.+|+||||| |++.++.
T Consensus 81 E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~ 139 (363)
T cd05628 81 EFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGH 139 (363)
T ss_pred cCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCC
Confidence 9999 69999997532 345555544443 89999999999999888 6666553
No 39
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.66 E-value=4.6e-16 Score=168.46 Aligned_cols=127 Identities=22% Similarity=0.125 Sum_probs=106.8
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec--cchHHHHHHHHHHHhcCCC-----CcceeEEEEEEeCCEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK--THHDVALKEIQNLIASDQH-----PNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~--~~~~~~~~Ei~~L~~l~~H-----pnIV~l~g~~~~~~~~~L 544 (613)
-+|.+.++||+|+||.|.+| +..+++.||||+++. ....+...|+.+|..+-+| -|+|+++++|...+++||
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 36899999999999999998 588899999999996 4556788999999887334 399999999999999999
Q ss_pred EecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccceecCCCcCcceeee
Q 007199 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIELWKANGHPSAQLLK 610 (613)
Q Consensus 545 V~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlKllh~dg~PsniLlk 610 (613)
|+|++.-+|+++|+.+ ....+++..+..+.. .+|..||..+|||+| +||+||||+
T Consensus 266 VfELL~~NLYellK~n----~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcD-------LKPENILL~ 323 (586)
T KOG0667|consen 266 VFELLSTNLYELLKNN----KFRGLSLPLVRKFAQQILTALLFLHELGIIHCD-------LKPENILLK 323 (586)
T ss_pred eehhhhhhHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc-------CChhheeec
Confidence 9999999999999986 445577766666555 899999988887655 568888885
No 40
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.66 E-value=1.2e-15 Score=163.96 Aligned_cols=122 Identities=19% Similarity=0.154 Sum_probs=98.6
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|+..+.||+|+||+||++ ...+++.||||++.+. ..+.+.+|+++|..+ +||||+++++++.+.+.+|+||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~l~~~~~~~~~~~lv~ 80 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhc-CCCCeeeeEEEEecCCEEEEEE
Confidence 3788999999999999997 4678899999999752 233678899988887 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||+ |+|.+++.... .+++..+.. .++.||.|||..+|+||||| |++.++
T Consensus 81 E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~ 138 (381)
T cd05626 81 DYIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG 138 (381)
T ss_pred ecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC
Confidence 9999 69999997542 344443333 33489999999999888877 555444
No 41
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.66 E-value=1.2e-15 Score=163.94 Aligned_cols=122 Identities=19% Similarity=0.183 Sum_probs=99.5
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|...+.||+|+||+||++. ..+++.||+|++.+. ..+.+.+|+++|.++ +||||+++++++.+.+.+||||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~-~h~~iv~~~~~~~~~~~~~lv~ 80 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFVM 80 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhC-CCCcCCeEEEEEEeCCEEEEEE
Confidence 37889999999999999974 678899999999753 234678899988887 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||+ |+|.+++...+ .+++..+..++ +.||.|||+.+|+||||| |+..++
T Consensus 81 E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g 138 (382)
T cd05625 81 DYIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 138 (382)
T ss_pred eCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 9999 69999997532 34555544443 389999999999888887 555554
No 42
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.65 E-value=2.6e-16 Score=159.77 Aligned_cols=123 Identities=22% Similarity=0.155 Sum_probs=96.2
Q ss_pred CceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-----EEEEE
Q 007199 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQD-----FVYLS 545 (613)
Q Consensus 472 ~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-----~~~LV 545 (613)
.-.|...+++|+|+||.||++. ..+++.||||+...... .-.+|+++|+.+ +|||||+|.-+|.... +..||
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-~knrEl~im~~l-~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-YKNRELQIMRKL-DHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-cCcHHHHHHHhc-CCcCeeeEEEEEEecCCCchhHHHHH
Confidence 3348889999999999999985 56689999999875322 345788899866 9999999998887532 45689
Q ss_pred ecCCCccHHHHHHHhc-CCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 546 LERCTCSLNDLIYVLS-GSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~GsL~~~L~~~~-~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
|||||-+|.++++... .......+.....+.++.+|+.|||..+|+|||||
T Consensus 101 leymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIK 152 (364)
T KOG0658|consen 101 LEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIK 152 (364)
T ss_pred HHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 9999999999998631 11134445566677777799999999999887776
No 43
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.65 E-value=1.3e-15 Score=162.43 Aligned_cols=122 Identities=22% Similarity=0.214 Sum_probs=99.1
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|+..+.||+|+||+||++. ..+|+.||||++... ....+.+|+++|..+ +||||+++++++...+..||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCeEEEEE
Confidence 48889999999999999974 678999999999852 223577899999887 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||+ |+|.+++.... .+++..+..+ ++.||.|||+.+|+||||| |+..++
T Consensus 81 E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~ 138 (364)
T cd05599 81 EYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG 138 (364)
T ss_pred CCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence 9999 69999997532 3444444443 3489999999999888877 555544
No 44
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.65 E-value=1.8e-15 Score=162.28 Aligned_cols=122 Identities=20% Similarity=0.189 Sum_probs=99.9
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|++.+.||+|+||.||++. ..+++.||||++.+. ..+.+.+|+++|.++ +||||+++++.+...+.+||||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEEcCCEEEEEE
Confidence 38899999999999999974 677899999999752 234678999999887 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||+ |+|.+++...+ .+++..+..+ ++.||.|||+.+|+||||| |+..++
T Consensus 81 E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~ 138 (376)
T cd05598 81 DYIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG 138 (376)
T ss_pred eCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC
Confidence 9999 69999997532 3444444333 3389999999999998888 555554
No 45
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.65 E-value=3.4e-16 Score=162.84 Aligned_cols=124 Identities=29% Similarity=0.293 Sum_probs=97.9
Q ss_pred CceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----------------chHHHHHHHHHHHhcCCCCcceeEE
Q 007199 472 GKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----------------HHDVALKEIQNLIASDQHPNIVRWY 533 (613)
Q Consensus 472 ~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----------------~~~~~~~Ei~~L~~l~~HpnIV~l~ 533 (613)
-+.|++.+.||+|.||.|.++ ...+++.||||++.+. ..+.+.+||.+|+++ +|||||+|+
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl-~H~nVV~Li 174 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKL-HHPNVVKLI 174 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhc-CCcCeeEEE
Confidence 355999999999999999998 4788999999999862 224788999999998 999999999
Q ss_pred EEEEeC--CEEEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccceecCCCcCcce
Q 007199 534 GVESDQ--DFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIELWKANGHPSAQ 607 (613)
Q Consensus 534 g~~~~~--~~~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlKllh~dg~Psni 607 (613)
++..+. +.+|||+|||. |.+...=. ....+.+.++..++. .||.|||.++||||||| |+|+
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~------d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIK-------PsNL 241 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPP------DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIK-------PSNL 241 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCC------CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccc-------hhhe
Confidence 998865 48999999999 76642211 112256666666665 89999999999887765 6666
Q ss_pred ee
Q 007199 608 LL 609 (613)
Q Consensus 608 Ll 609 (613)
||
T Consensus 242 Ll 243 (576)
T KOG0585|consen 242 LL 243 (576)
T ss_pred EE
Confidence 55
No 46
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.65 E-value=2.3e-15 Score=158.52 Aligned_cols=122 Identities=21% Similarity=0.153 Sum_probs=99.9
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.+.||+|+||.||++. ..+++.||+|.+... ..+.+.+|+++|.++ +||||+++++++...+..|+||
T Consensus 19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL-SHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCcEEEEEEcCCEEEEEE
Confidence 38999999999999999984 567899999999752 234688999999888 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||+ |+|.+++.... .+++..+..+ ++.||.|||+.+|+||||| |++.++
T Consensus 98 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~ 155 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG------RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG 155 (329)
T ss_pred cCCCCChHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC
Confidence 9999 69999998532 3444444433 3489999999999888887 555554
No 47
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=99.64 E-value=4.3e-15 Score=169.90 Aligned_cols=180 Identities=15% Similarity=0.129 Sum_probs=119.9
Q ss_pred CCCCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeecccc-----------c----------cCCCCCeEEEecCCC
Q 007199 44 LPPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQA-----------S----------FNSNASEFYLDVDED 102 (613)
Q Consensus 44 ~~~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~-----------~----------~~~~~~~~~i~~~~D 102 (613)
+.+.+|++|++|.+|.|+|||+.||+++|+|+.+.++.+..+. + .+......++.++.|
T Consensus 190 Plvvgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~D 269 (764)
T TIGR03074 190 PLKVGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSD 269 (764)
T ss_pred CEEECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCC
Confidence 4468999999999999999999999999999987654321100 0 000112244455669
Q ss_pred CeEEEEecCCCceeeecccHHH----------------HhhhCceeecCCcEEEEee----------cceEEEEECCCCc
Q 007199 103 WELYFHSKRFGKMKKLSSSAEE----------------YIRRMPYISKDGGVTLGAM----------KTSVFLVDVKSGR 156 (613)
Q Consensus 103 G~lY~~~~~~G~l~~~~~~~~~----------------~v~~sP~~~~dg~v~~Gs~----------~~~~~~vD~~tG~ 156 (613)
|.||++|++||++ .|.|..+. .+.++|++. ++.||+|+. .+.++|+|++||+
T Consensus 270 g~LiALDA~TGk~-~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~-~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGk 347 (764)
T TIGR03074 270 ARLIALDADTGKL-CEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVA-GTTVVIGGRVADNYSTDEPSGVIRAFDVNTGA 347 (764)
T ss_pred CeEEEEECCCCCE-EEEecCCCceeeecccCcCCCcccccccCCEEE-CCEEEEEecccccccccCCCcEEEEEECCCCc
Confidence 9999999999999 88876532 246889999 888999975 6889999999999
Q ss_pred EEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccccccccEEEEE------------------eeeeEEEEEeC
Q 007199 157 VVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIM------------------RTDYVLQSTSQ 218 (613)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ig------------------r~d~~l~a~d~ 218 (613)
++|++.++.+....+...++ .+. ...++ .=.+...++ ..+.||++ .....|.|+|+
T Consensus 348 l~W~~~~g~p~~~~~~~~g~-~~~-~gg~n--~W~~~s~D~--~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~ 421 (764)
T TIGR03074 348 LVWAWDPGNPDPTAPPAPGE-TYT-RNTPN--SWSVASYDE--KLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDA 421 (764)
T ss_pred EeeEEecCCCCcccCCCCCC-Eec-cCCCC--ccCceEEcC--CCCeEEEeCCCccccccCCccccCcccccceEEEEeC
Confidence 99999986544322222111 100 00000 000111111 13355552 23567999999
Q ss_pred CCCceEEEEEece
Q 007199 219 DSGEVLWNVAYAD 231 (613)
Q Consensus 219 ~~G~~~Wn~t~~~ 231 (613)
+||+++|.+-+..
T Consensus 422 ~TGk~~W~~Q~~~ 434 (764)
T TIGR03074 422 TTGKERWVFQTVH 434 (764)
T ss_pred CCCceEEEecccC
Confidence 9999999886643
No 48
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.64 E-value=2.4e-15 Score=155.07 Aligned_cols=123 Identities=18% Similarity=0.127 Sum_probs=99.4
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|...+.||+|+||.||++. ..+++.||+|.++.. ....+.+|++++.++ +||||+++++++...+..++||||
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNL-KHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhC-CCCCEeeEEEEEcCCCeEEEEEeC
Confidence 38889999999999999974 567899999998752 234678999999887 999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
++|+|.+++.... ..++...+.. .+..||.|||+.+|+||||| |++.++
T Consensus 85 ~~~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~ 140 (288)
T cd07871 85 LDSDLKQYLDNCG-----NLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG 140 (288)
T ss_pred CCcCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence 9999999987542 2334444433 34489999999999988887 555444
No 49
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.64 E-value=2.4e-15 Score=154.82 Aligned_cols=117 Identities=19% Similarity=0.097 Sum_probs=95.1
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|...+.||+|+||+||++. ..+|+.||||.+.... ...+.+|+++|.++ +|+||+++++++...+..++|||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhc-CCCcEEEEEEEEccCCeEEEEEE
Confidence 6778999999999999974 6789999999987522 23577899999887 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
||+ |+|.+++.... ...+++..+..++ +.|+.|||+.+++|||||
T Consensus 81 ~~~~g~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dik 129 (285)
T cd05631 81 IMNGGDLKFHIYNMG----NPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLK 129 (285)
T ss_pred ecCCCcHHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCC
Confidence 999 69998886532 2234555544443 389999999999888877
No 50
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.64 E-value=9.5e-16 Score=151.35 Aligned_cols=124 Identities=23% Similarity=0.213 Sum_probs=102.5
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|+..+.||.|+||.|.+. .+.+|..+|+|.+.+. ..+...+|..+|+.. .||.++++++.|.+.+.+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v-~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAV-SHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhc-cCceeEEEEEeeccCCeEEEE
Confidence 34888999999999999996 5788999999999863 344678999999887 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCCc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
|||++ |.|+.+|++.+ .+++..+..+. +.|++|||+..|++||+| +++++|+
T Consensus 123 meyv~GGElFS~Lrk~~------rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~ 182 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSG------RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGH 182 (355)
T ss_pred EeccCCccHHHHHHhcC------CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCc
Confidence 99999 69999999764 34444443333 389999999999998887 6666664
No 51
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.63 E-value=1.8e-16 Score=169.26 Aligned_cols=125 Identities=22% Similarity=0.255 Sum_probs=102.7
Q ss_pred ceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~-----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+.+.+.+.||+|.||+||+| .+.| .||||.+.. +..+.|.+|+.++++- +|.||+=++|+|..+.. .||..
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg-~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkT-RH~NIlLFMG~~~~p~~-AIiTq 467 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRG-RWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKT-RHENILLFMGACMNPPL-AIITQ 467 (678)
T ss_pred HHhhccceeccccccceeec-cccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhc-chhhheeeehhhcCCce-eeeeh
Confidence 34678899999999999985 3444 599999986 3456899999999888 99999999999998877 99999
Q ss_pred CCCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc----eecCCCc
Q 007199 548 RCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 548 ~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
+|+| +|+.+||..+.++ .....-.+++..++||.|||.++||||||| |+|.+++
T Consensus 468 wCeGsSLY~hlHv~etkf--dm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~k 526 (678)
T KOG0193|consen 468 WCEGSSLYTHLHVQETKF--DMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLK 526 (678)
T ss_pred hccCchhhhhccchhhhh--hHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCc
Confidence 9998 9999999754322 222334566666699999999999999999 9998864
No 52
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.63 E-value=3.9e-17 Score=160.74 Aligned_cols=124 Identities=20% Similarity=0.308 Sum_probs=109.7
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec-cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-c
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-C 551 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~-~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-G 551 (613)
|.+...||+|+||.||++ ++..|+.+|+|.+.. ...++..+|+.+|+++ +.|++|++||.|.....++||||||. |
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC-~S~yVVKYYGSYFK~sDLWIVMEYCGAG 113 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQC-KSKYVVKYYGSYFKHSDLWIVMEYCGAG 113 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHc-CCchhhhhhhhhccCCceEeehhhcCCC
Confidence 677889999999999997 789999999999986 6778999999999888 99999999999999999999999999 9
Q ss_pred cHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCcC
Q 007199 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGHP 604 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~P 604 (613)
+..+.++.+ ...+.++.+..++. .||.|||...-|||||| ||+.+|+.
T Consensus 114 SiSDI~R~R-----~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~A 168 (502)
T KOG0574|consen 114 SISDIMRAR-----RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIA 168 (502)
T ss_pred cHHHHHHHh-----cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchh
Confidence 999999874 45667777766665 89999999999999999 77777753
No 53
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=99.63 E-value=3.6e-15 Score=165.85 Aligned_cols=186 Identities=17% Similarity=0.159 Sum_probs=121.9
Q ss_pred CCCCCCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeecc--c-----cccCCCCCeEEEecCCCCeEEEEecCCCc
Q 007199 42 PPLPPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSY--Q-----ASFNSNASEFYLDVDEDWELYFHSKRFGK 114 (613)
Q Consensus 42 ~~~~~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~--~-----~~~~~~~~~~~i~~~~DG~lY~~~~~~G~ 114 (613)
+.+.+.+++||+++.+|.|||||+.||+++|+++.+.+..... . .......+.+|+ ++.||.|||+|+.||+
T Consensus 63 stPvv~~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v-~t~dg~l~ALDa~TGk 141 (527)
T TIGR03075 63 SQPLVVDGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFF-GTLDARLVALDAKTGK 141 (527)
T ss_pred cCCEEECCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEE-EcCCCEEEEEECCCCC
Confidence 3455689999999999999999999999999998754321110 0 000001123454 5569999999999999
Q ss_pred eeeecccHHH-----HhhhCceeecCCcEEEEee------cceEEEEECCCCcEEEEEecCCCCCCCCCcC-----CCCC
Q 007199 115 MKKLSSSAEE-----YIRRMPYISKDGGVTLGAM------KTSVFLVDVKSGRVVDNYVLDFSASTPGFQS-----DENK 178 (613)
Q Consensus 115 l~~~~~~~~~-----~v~~sP~~~~dg~v~~Gs~------~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~-----~~~~ 178 (613)
+ .|.+.+.+ .+.++|++. ++.||+|+. ++.++|+|++||+++|++.+.......+... .+.+
T Consensus 142 ~-~W~~~~~~~~~~~~~tssP~v~-~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~ 219 (527)
T TIGR03075 142 V-VWSKKNGDYKAGYTITAAPLVV-KGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPG 219 (527)
T ss_pred E-EeecccccccccccccCCcEEE-CCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccc
Confidence 9 99988753 467899999 888999974 6899999999999999998753211000000 0000
Q ss_pred c-cccC-----CCcccccccccccccccccEEEEEee-----ee-----------EEEEEeCCCCceEEEEEeceee
Q 007199 179 H-VVPV-----DGYEELVESGVGNLKRIRQLVYIMRT-----DY-----------VLQSTSQDSGEVLWNVAYADFK 233 (613)
Q Consensus 179 ~-~~~~-----~~~~~~~~~~~~~~~~~~~~v~igr~-----d~-----------~l~a~d~~~G~~~Wn~t~~~~~ 233 (613)
. .-+. .+.. .=.+...++ ..++||+|.- ++ .|.|+|.+||+.+|.+-....+
T Consensus 220 ~~tw~~~~~~~gg~~-~W~~~s~D~--~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D 293 (527)
T TIGR03075 220 AKTWPGDAWKTGGGA-TWGTGSYDP--ETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHD 293 (527)
T ss_pred cCCCCCCccccCCCC-ccCceeEcC--CCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCC
Confidence 0 0000 0000 000112222 2568999882 23 7999999999999997665433
No 54
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.63 E-value=1.9e-15 Score=161.03 Aligned_cols=121 Identities=26% Similarity=0.311 Sum_probs=101.4
Q ss_pred cccCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCE
Q 007199 469 RRIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (613)
Q Consensus 469 ~~i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~ 541 (613)
..+.+.|.+.++||+|.||.||+|. ..+|+.+|+|.+.+. ..+.+.+|+++|.++..|||||.+++.|++.+.
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~ 110 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS 110 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence 4455679999999999999999984 677999999999863 235899999999998449999999999999999
Q ss_pred EEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 542 VYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 542 ~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+++|||+|. |.|++.|... .+++..+. +++..+++|||+.+++|||+|
T Consensus 111 ~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~gvvHrDlK 162 (382)
T KOG0032|consen 111 VYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLK 162 (382)
T ss_pred EEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCC
Confidence 999999999 6999999863 14444443 444499999999999888887
No 55
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.63 E-value=5.1e-15 Score=153.73 Aligned_cols=118 Identities=18% Similarity=0.081 Sum_probs=96.2
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+.|.+.+.||+|+||.||++. ..+++.||||+++.. ....+.+|++++..+ +||||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhC-CCCCcCeEEEEEecCCeEEEEEE
Confidence 348899999999999999975 567899999998752 223678899999887 99999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
||+|+|.+++.... ..+....+.. .++.||.|||+.+|+|||||
T Consensus 84 ~~~~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlk 130 (303)
T cd07869 84 YVHTDLCQYMDKHP-----GGLHPENVKLFLFQLLRGLSYIHQRYILHRDLK 130 (303)
T ss_pred CCCcCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 99999999887642 2334444433 33489999999999888777
No 56
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.62 E-value=5.1e-15 Score=147.88 Aligned_cols=112 Identities=22% Similarity=0.355 Sum_probs=88.0
Q ss_pred CCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecc-cHHH-
Q 007199 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSS-SAEE- 124 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~-~~~~- 124 (613)
.++.+|+++.+|.|||+|+.||+++|+++.+.++.... .. ..+.+|+... |+.||++|..+|++ .|.. ....
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~---~~-~~~~v~v~~~-~~~l~~~d~~tG~~-~W~~~~~~~~ 108 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDLPGPISGAP---VV-DGGRVYVGTS-DGSLYALDAKTGKV-LWSIYLTSSP 108 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEECSSCGGSGE---EE-ETTEEEEEET-TSEEEEEETTTSCE-EEEEEE-SSC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeecccccccee---ee-cccccccccc-eeeeEecccCCcce-eeeecccccc
Confidence 78999999999999999999999999999877766651 11 1124666664 88999999999999 8884 3331
Q ss_pred ----HhhhCceeecCCcEEEEeecceEEEEECCCCcEEEEEecCC
Q 007199 125 ----YIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDF 165 (613)
Q Consensus 125 ----~v~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~ 165 (613)
....+|.+. ++.+|++..++.++++|++||+++|++....
T Consensus 109 ~~~~~~~~~~~~~-~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 109 PAGVRSSSSPAVD-GDRLYVGTSSGKLVALDPKTGKLLWKYPVGE 152 (238)
T ss_dssp TCSTB--SEEEEE-TTEEEEEETCSEEEEEETTTTEEEEEEESST
T ss_pred ccccccccCceEe-cCEEEEEeccCcEEEEecCCCcEEEEeecCC
Confidence 122344455 7779999999999999999999999998754
No 57
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.62 E-value=4.3e-15 Score=156.56 Aligned_cols=122 Identities=21% Similarity=0.276 Sum_probs=98.6
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.+.||+|+||.||++. ..+++.||||+++.. ....+.+|+++|..+ +||||+++++++...+..||||
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTT-KSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhC-CCCCCccEEEEEEcCCEEEEEE
Confidence 48899999999999999985 567899999999853 234678899988887 8999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||+ |+|.+++.... .+.+..+.. .++.+|.|||+.+++||||| ++..++
T Consensus 81 e~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~ 138 (333)
T cd05600 81 EYVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG 138 (333)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC
Confidence 9999 69999997532 344444433 33489999999999888887 454444
No 58
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.62 E-value=9.6e-16 Score=159.62 Aligned_cols=131 Identities=18% Similarity=0.134 Sum_probs=94.7
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcEEEEEEeeccchHHHHHHHHHHHhc-CCCCcceeEEEEEEeCC----EEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIAS-DQHPNIVRWYGVESDQD----FVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l-~~HpnIV~l~g~~~~~~----~~~LV~E~~ 549 (613)
+++.++||+|.||.||||.+ +++.||||++..++.+.|.+|-++..-. ++|+||++++++..... +++||+||.
T Consensus 212 l~l~eli~~Grfg~V~KaqL-~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh 290 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQL-DNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFH 290 (534)
T ss_pred hhhHHHhhcCccceeehhhc-cCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeec
Confidence 67788999999999999654 4599999999998899999888766432 69999999999988776 899999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc--eecCCCcCcceeee
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE--LWKANGHPSAQLLK 610 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK--llh~dg~PsniLlk 610 (613)
+ |||.+||+.+- ........+..-+.+||.|||.-.---.-.| +.|||+|-.|+|||
T Consensus 291 ~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK 350 (534)
T KOG3653|consen 291 PKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK 350 (534)
T ss_pred cCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEc
Confidence 9 99999998752 1111222233333399999997422111112 44455555555554
No 59
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.62 E-value=2e-15 Score=156.04 Aligned_cols=122 Identities=20% Similarity=0.169 Sum_probs=98.4
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|++.+.||+|+||.||++. ..+++.||+|++... ..+.+.+|+++|.++ +||||+++++++.+.+..|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEV-SHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhC-CCCcHhhhHhhhccCCeEEEEE
Confidence 47889999999999999974 567899999999752 234678899999888 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||++ |+|.++++..+ .+++..... .++.||.|||+.+++||||| |+..++
T Consensus 81 e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~ 138 (291)
T cd05612 81 EYVPGGELFSYLRNSG------RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG 138 (291)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence 9999 69999997542 233333333 33489999999999988887 555444
No 60
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.62 E-value=5.3e-16 Score=165.13 Aligned_cols=123 Identities=23% Similarity=0.226 Sum_probs=106.3
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec---cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK---THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~---~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
..|...+.||+|+.|.||.+ ...+++.||||++.. ...+-+.+|+.+|+.. +|+|||+++..|...+++++||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~-~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDL-HHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhc-cchHHHHHHHHhcccceeEEEEee
Confidence 44788889999999999997 578899999999985 3455788999999888 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
|+ |+|.|.+... .+.+.+++.++. +||+|||..+|+||||| |+..+|.
T Consensus 352 m~ggsLTDvVt~~-------~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~ 407 (550)
T KOG0578|consen 352 MEGGSLTDVVTKT-------RMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGS 407 (550)
T ss_pred cCCCchhhhhhcc-------cccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCc
Confidence 99 6999999754 366667666665 99999999999999999 7777664
No 61
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.62 E-value=1.9e-15 Score=158.31 Aligned_cols=114 Identities=21% Similarity=0.186 Sum_probs=96.0
Q ss_pred eeeEeecCceEEEEE-EeeCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCCc
Q 007199 478 NKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~-----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~G 551 (613)
.++||+|.||+||-+ ++.+|+.||||.|.+ ...+.+.+|+.+|.++ .||.||.+...|++.+.+++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l-~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNL-HHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhc-CCCCeeEEEEeecCCceEEEEehhhcc
Confidence 678999999999986 689999999999886 3456899999999888 999999999999999999999999999
Q ss_pred cHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++.+.|-.. +...+++.....++. .||+|||.++|+|+|||
T Consensus 648 DMLEMILSs----EkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLK 691 (888)
T KOG4236|consen 648 DMLEMILSS----EKGRLPERITKFLVTQILVALRYLHFKNIVHCDLK 691 (888)
T ss_pred hHHHHHHHh----hcccchHHHHHHHHHHHHHHHHHhhhcceeeccCC
Confidence 998888654 445555444333332 79999999999988776
No 62
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.62 E-value=5.3e-15 Score=158.45 Aligned_cols=122 Identities=17% Similarity=0.112 Sum_probs=99.6
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|++.+.||+|+||.||++. ..+++.||+|++.+. ..+.+.+|+.++..+ +||||+++++++.+.+..|+|
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~-~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHA-NSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCcceEEEEEecCCEEEEE
Confidence 448999999999999999974 678899999999752 223577899888777 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||||+ |+|.+++... .+++.++..++. .||.|||+.+|+||||| |+..++
T Consensus 122 ~Ey~~gg~L~~~l~~~-------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~ 179 (370)
T cd05596 122 MEYMPGGDLVNLMSNY-------DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 179 (370)
T ss_pred EcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC
Confidence 99999 6999998653 245566655443 89999999999888887 555554
No 63
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.62 E-value=6.7e-15 Score=156.90 Aligned_cols=122 Identities=20% Similarity=0.132 Sum_probs=98.5
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|+..+.||+|+||.||++. ..+++.||+|+++.. ....+.+|+.++..+ +||||+++++.+.+.+.+||||
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEA-DGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999974 667899999999752 234677899888777 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||+ |+|.+++.... .+++..+..+ ++.+|.|||+.+|+||||| ++..++
T Consensus 81 E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~ 138 (360)
T cd05627 81 EFLPGGDMMTLLMKKD------TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG 138 (360)
T ss_pred eCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC
Confidence 9999 69999997532 3444444433 3389999999999988888 555444
No 64
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.62 E-value=1.4e-15 Score=165.02 Aligned_cols=125 Identities=17% Similarity=0.170 Sum_probs=104.3
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec------cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK------THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~------~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|.+.++||+|+||+|+++. +.+++.+|||.+++ ...+....|.+++...-+||.|++++.+|++.+++|+|
T Consensus 368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv 447 (694)
T KOG0694|consen 368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV 447 (694)
T ss_pred cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence 569999999999999999985 78889999999987 35567888988887766799999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCcC
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGHP 604 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~P 604 (613)
|||+. |++..+.+ ...+++..+.-+.+ .||.|||+++||+|||| ||+.+||.
T Consensus 448 mey~~Ggdm~~~~~-------~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~ 507 (694)
T KOG0694|consen 448 MEYVAGGDLMHHIH-------TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHV 507 (694)
T ss_pred EEecCCCcEEEEEe-------cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcE
Confidence 99999 58544333 23456655555554 89999999999999999 88888874
No 65
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.62 E-value=6.7e-15 Score=155.13 Aligned_cols=124 Identities=20% Similarity=0.162 Sum_probs=99.4
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.+.||+|+||+||++. ..+++.||+|.+.+. ..+.+.+|+.++..+ +|+||+++++++...+++|+||
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG-DRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC-CCCCCCceEEEEecCCeEEEEE
Confidence 48889999999999999974 677899999999752 233577888888776 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCCc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
||++ |+|.+++.... ..+++..+..++ +.+|.|||+.+++||||| +++.++.
T Consensus 81 e~~~g~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~ 140 (331)
T cd05597 81 DYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGH 140 (331)
T ss_pred ecCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCC
Confidence 9999 69999997532 234444444433 389999999999998888 5555553
No 66
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.62 E-value=1e-14 Score=159.95 Aligned_cols=120 Identities=13% Similarity=0.066 Sum_probs=94.2
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeC--------CEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQ--------DFVY 543 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--------~~~~ 543 (613)
+.|.+.+.||+|+||.||++. ..+++.||||++... .....+|+.+|..+ +||||+++++++... ..++
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~-~~~~~~Ei~il~~l-~h~niv~l~~~~~~~~~~~~~~~~~l~ 143 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD-PQYKNRELLIMKNL-NHINIIFLKDYYYTECFKKNEKNIFLN 143 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC-cchHHHHHHHHHhc-CCCCCcceeeeEeecccccCCCceEEE
Confidence 459999999999999999974 577899999988653 23456799888877 999999999987542 2578
Q ss_pred EEecCCCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
+|||||+|+|.+++..... ....+++.++..++ +.||.|||+.+|+|||||
T Consensus 144 lvmE~~~~~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLK 197 (440)
T PTZ00036 144 VVMEFIPQTVHKYMKHYAR--NNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLK 197 (440)
T ss_pred EEEecCCccHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcC
Confidence 9999999999888875321 23456666665544 389999999999888887
No 67
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.62 E-value=4.8e-15 Score=153.87 Aligned_cols=122 Identities=22% Similarity=0.176 Sum_probs=92.8
Q ss_pred eEEEeeeEeecCceEEEEEEee-----------------CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNY-----------------EGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRW 532 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~-----------------~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l 532 (613)
.|.+.++||+|+||.||++... ++..||+|.+.... ...+.+|+++|.++ +||||+++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~ 84 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRL-KDPNIIRL 84 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhc-CCCCeeEE
Confidence 4888999999999999997421 23479999987632 34688999999887 99999999
Q ss_pred EEEEEeCCEEEEEecCCC-ccHHHHHHHhcCCC-------------ccccCCHHHHHHH---HHHHHHHHhcCCceeecc
Q 007199 533 YGVESDQDFVYLSLERCT-CSLNDLIYVLSGSF-------------EEQLNAKEQDSNL---LNEVRIRLLPVMENTKDI 595 (613)
Q Consensus 533 ~g~~~~~~~~~LV~E~~~-GsL~~~L~~~~~~~-------------~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDl 595 (613)
++++...+..++||||++ |+|.+++....... ....++.....++ ++.||.|||+.+++||||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dl 164 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDL 164 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCc
Confidence 999999999999999999 69999997532100 0112333333333 338999999999888777
Q ss_pred c
Q 007199 596 E 596 (613)
Q Consensus 596 K 596 (613)
|
T Consensus 165 k 165 (304)
T cd05096 165 A 165 (304)
T ss_pred c
Confidence 6
No 68
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.61 E-value=4.6e-15 Score=151.01 Aligned_cols=117 Identities=18% Similarity=0.101 Sum_probs=94.9
Q ss_pred eEEEeeeEeecCceEEEEEEe----eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~----~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
.|++.+.||+|+||.||++.. ..+..||+|.++... ...+.+|++.+.++ +||||+++++++...+..++|
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF-DHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEecCCCcEEE
Confidence 489999999999999999742 345689999988632 23688999998877 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|||++ |+|.+++.... ..++......++. .|+.|||+.+++|||||
T Consensus 85 ~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dik 134 (266)
T cd05064 85 TEYMSNGALDSFLRKHE-----GQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLA 134 (266)
T ss_pred EEeCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccc
Confidence 99999 69999998632 2344454444443 89999999999888887
No 69
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.61 E-value=6.1e-15 Score=158.01 Aligned_cols=122 Identities=17% Similarity=0.161 Sum_probs=98.7
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|++.+.||+|+||.||++. ..+++.+|+|.+.+. ..+.+.+|+.++..+ +||||+++++++.+.+..|+|
T Consensus 43 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 43 EDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEE
Confidence 458999999999999999974 667899999998751 223577888888666 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||||+ |+|.+++... .+++.++..++. .||.|||+.+|+||||| |++.++
T Consensus 122 ~Ey~~gg~L~~~l~~~-------~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~ 179 (370)
T cd05621 122 MEYMPGGDLVNLMSNY-------DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG 179 (370)
T ss_pred EcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC
Confidence 99999 6999999753 245555554443 89999999999888877 555554
No 70
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.61 E-value=4.9e-15 Score=155.53 Aligned_cols=117 Identities=19% Similarity=0.168 Sum_probs=94.2
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
++||+|+||.||++. ..+|+.||+|++++. ....+.+|+++|.++ +||||+++++++...+..||||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~~ 79 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNT-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence 469999999999974 678999999999852 223677899989887 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++...+ .+.+..+..+ ++.||+|||+.+|+||||| +++.++
T Consensus 80 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~ 132 (323)
T cd05571 80 GELFFHLSRER------VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG 132 (323)
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC
Confidence 69999997532 3445554443 3489999999999888887 555444
No 71
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.61 E-value=2.6e-15 Score=164.05 Aligned_cols=127 Identities=23% Similarity=0.166 Sum_probs=104.8
Q ss_pred ceEEEeeeEeecCceEEEEEEe-eCC---cEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN-YEG---RSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~-~~g---~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
....+.++||.|.||.||++++ ..| ..||||.++.. .+.+|+.|..+|.+. +||||++|.|+......++|
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF-dHPNIIrLEGVVTks~PvMI 707 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIRLEGVVTKSKPVMI 707 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC-CCCcEEEEEEEEecCceeEE
Confidence 3367899999999999999753 223 46999999963 344899999999888 99999999999999999999
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|.|||+ |+|+.||+.+.+ +...+++--+.|-+..||+||..++.+||||- |++.|+
T Consensus 708 iTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnL 768 (996)
T KOG0196|consen 708 ITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNL 768 (996)
T ss_pred EhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccce
Confidence 999999 999999998754 34445555556666699999999999999997 666554
No 72
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.61 E-value=8.6e-15 Score=155.05 Aligned_cols=116 Identities=23% Similarity=0.238 Sum_probs=94.7
Q ss_pred eEEEeeeEeecCceEEEEEE-eeC-CcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYE-GRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~-g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
.|.+.+.||+|+||.||++. ..+ +..||+|++... ..+.+.+|++++..+ +||||+++++++...+..|+|
T Consensus 31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI-NHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC-CCCCCcceEEEEEeCCEEEEE
Confidence 38899999999999999985 333 368999998752 334678899988777 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
||||+ |+|.+++.... .+++.++..++ +.+|.|||+.+++|||||
T Consensus 110 ~Ey~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLk 158 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK------RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLK 158 (340)
T ss_pred EeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCC
Confidence 99999 69999998542 34555544433 389999999999888887
No 73
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.61 E-value=2.5e-15 Score=158.57 Aligned_cols=88 Identities=24% Similarity=0.355 Sum_probs=73.2
Q ss_pred ceEEEeeeEeecCceEEEEEE------eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-E
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG------NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD-F 541 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~------~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-~ 541 (613)
++|++.+.||+|+||.||++. ..+++.||||+++.. ..+.+.+|+.+|.++.+||||++++++|...+ .
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGP 86 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCc
Confidence 458999999999999999974 234568999999752 23468899999988878999999999887654 6
Q ss_pred EEEEecCCC-ccHHHHHHHh
Q 007199 542 VYLSLERCT-CSLNDLIYVL 560 (613)
Q Consensus 542 ~~LV~E~~~-GsL~~~L~~~ 560 (613)
++++||||+ |+|.++++..
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~ 106 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAK 106 (338)
T ss_pred eEEEEecCCCCcHHHHHHhc
Confidence 899999999 7999999864
No 74
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.61 E-value=1.1e-15 Score=164.65 Aligned_cols=115 Identities=23% Similarity=0.278 Sum_probs=98.1
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|++++.||+|+-|.|.+| +..+|+.+|||++.+. ....+.+||-+ ++++.|||++++|++++++.++|||+|
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIvi-MkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVI-MKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHH-HHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 889999999999999997 6899999999999873 23368899954 477799999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|++ |.|+++|-.++ .+++..+++++. .|+.|+|..+|+|||+|
T Consensus 93 yv~gGELFdylv~kG------~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLK 139 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKG------PLPEREAAHFFRQILDGVSYCHAFNICHRDLK 139 (786)
T ss_pred ecCCchhHHHHHhhC------CCCCHHHHHHHHHHHHHHHHHhhhcceeccCC
Confidence 999 79999998643 455555555554 89999999999988877
No 75
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.61 E-value=5.8e-15 Score=155.06 Aligned_cols=117 Identities=21% Similarity=0.153 Sum_probs=93.7
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||.||++. ..+|..||+|.++.. ....+.+|++++.++ +||||+++++++...+..|||||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT-RHPFLTALKYAFQTHDRLCFVMEYANG 79 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCEEEEEEeCCCC
Confidence 479999999999974 678999999999852 223567899888777 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++...+ .+++..+..++ +.||.|||+.+++||||| |++.++
T Consensus 80 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~ 132 (323)
T cd05595 80 GELFFHLSRER------VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 132 (323)
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC
Confidence 69998887532 34455544443 389999999999888877 555444
No 76
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.61 E-value=2e-15 Score=153.38 Aligned_cols=119 Identities=22% Similarity=0.167 Sum_probs=97.0
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccch-----HHHHHHHHHHHhcCCCCc-ceeEEEEEEeCC------E
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPN-IVRWYGVESDQD------F 541 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~-----~~~~~Ei~~L~~l~~Hpn-IV~l~g~~~~~~------~ 541 (613)
|...++||+|+||+||+| ...+|+.||+|+++.+.. ....+|+.+|.++ +|+| ||++++++...+ .
T Consensus 13 ~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L-~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 13 YEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRL-SHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHh-CCCcceEEEEeeeeecccccccce
Confidence 566778999999999998 578899999999986433 2578999988888 9999 999999999888 8
Q ss_pred EEEEecCCCccHHHHHHHhcCCCccccCC---HHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNA---KEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 542 ~~LV~E~~~GsL~~~L~~~~~~~~~~~~~---~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++|||||+.-+|.+++....... ...+ ....+++++.|+.|||+++|+|||||
T Consensus 92 l~lvfe~~d~DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLK 147 (323)
T KOG0594|consen 92 LYLVFEFLDRDLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLK 147 (323)
T ss_pred EEEEEEeecccHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCC
Confidence 99999999999999999764211 2333 34445555699999999999877765
No 77
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.61 E-value=1e-14 Score=153.77 Aligned_cols=123 Identities=19% Similarity=0.158 Sum_probs=97.7
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.+.||+|+||.||++. ..+++.||+|.+.+. ....+.+|+.++... +|+||+++++++...+..||||
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG-DCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEcCCEEEEEE
Confidence 48899999999999999974 667889999998752 223467788777666 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||+ |+|.+++.... ..+++..+..++ +.||+|||+.+|+||||| ++..++
T Consensus 81 Ey~~gg~L~~~l~~~~-----~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~ 139 (331)
T cd05624 81 DYYVGGDLLTLLSKFE-----DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG 139 (331)
T ss_pred eCCCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC
Confidence 9999 69999998632 234444444333 389999999999988887 555444
No 78
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.60 E-value=1e-14 Score=153.49 Aligned_cols=123 Identities=20% Similarity=0.130 Sum_probs=99.2
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.+.||+|+||+||++. ..+|+.||+|+++.. ..+.+.+|+.++..+ +||||+++++++...+..||||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS-NSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceeeEEecCCeEEEEE
Confidence 48889999999999999974 678999999999863 233677888887666 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||+ |+|.+++.... ..+++..+..++ +.||+|||+.+|+||||| ++..++
T Consensus 81 e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~ 139 (330)
T cd05601 81 EYQPGGDLLSLLNRYE-----DQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG 139 (330)
T ss_pred CCCCCCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC
Confidence 9999 69999998642 245555554443 389999999999888877 454444
No 79
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.60 E-value=6.3e-15 Score=156.07 Aligned_cols=122 Identities=24% Similarity=0.224 Sum_probs=99.9
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.+.||+|+||+||++. ..+|+.||||+++.. ....+.+|++++..+ +||||+++++++.+.+..|+||
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhheecCCeEEEEE
Confidence 48889999999999999974 568999999999852 234678899888777 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||+ |+|.+++... ..+++.++..++. .||.|||..+++||||| ++..++
T Consensus 81 e~~~~~~L~~~l~~~------~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~ 138 (350)
T cd05573 81 EYMPGGDLMNLLIRK------DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG 138 (350)
T ss_pred cCCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence 9999 6999999854 2345555544443 89999999999988887 555554
No 80
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=99.60 E-value=1e-14 Score=145.69 Aligned_cols=151 Identities=22% Similarity=0.364 Sum_probs=112.3
Q ss_pred cCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHHHhhhCceeecC
Q 007199 56 LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKD 135 (613)
Q Consensus 56 ~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~v~~sP~~~~d 135 (613)
.+|+|+|+|+.||+++|++..++++-+....+.. +...+|+. +.++.||++|+.+|++ .|.++.++.+...|... +
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~-~~~~v~~~-~~~~~l~~~d~~tG~~-~W~~~~~~~~~~~~~~~-~ 76 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGPGIGGPVATAVP-DGGRVYVA-SGDGNLYALDAKTGKV-LWRFDLPGPISGAPVVD-G 76 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSSCSSEEETEEE-ETTEEEEE-ETTSEEEEEETTTSEE-EEEEECSSCGGSGEEEE-T
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCccceEEE-eCCEEEEE-cCCCEEEEEECCCCCE-EEEeeccccccceeeec-c
Confidence 3799999999999999999874433222101111 12245555 5599999999999999 99999998888889777 8
Q ss_pred CcEEEEeecceEEEEECCCCcEEEEE-ecCCCCCCCCCcCCCCCccccCCCcccccccccccccccccEEEEEeeeeEEE
Q 007199 136 GGVTLGAMKTSVFLVDVKSGRVVDNY-VLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQ 214 (613)
Q Consensus 136 g~v~~Gs~~~~~~~vD~~tG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~igr~d~~l~ 214 (613)
+.||+++.++.++++|++||+++|+. ....+.. +. ..+. .+...++.+|++..++.|+
T Consensus 77 ~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~--~~-----------------~~~~--~~~~~~~~~~~~~~~g~l~ 135 (238)
T PF13360_consen 77 GRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPA--GV-----------------RSSS--SPAVDGDRLYVGTSSGKLV 135 (238)
T ss_dssp TEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTC--ST-----------------B--S--EEEEETTEEEEEETCSEEE
T ss_pred cccccccceeeeEecccCCcceeeeecccccccc--cc-----------------cccc--CceEecCEEEEEeccCcEE
Confidence 88999999999999999999999995 4432111 00 0000 0001246899999999999
Q ss_pred EEeCCCCceEEEEEece
Q 007199 215 STSQDSGEVLWNVAYAD 231 (613)
Q Consensus 215 a~d~~~G~~~Wn~t~~~ 231 (613)
++|+++|+++|++.+.+
T Consensus 136 ~~d~~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 136 ALDPKTGKLLWKYPVGE 152 (238)
T ss_dssp EEETTTTEEEEEEESST
T ss_pred EEecCCCcEEEEeecCC
Confidence 99999999999998854
No 81
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.60 E-value=9.5e-15 Score=153.80 Aligned_cols=111 Identities=19% Similarity=0.141 Sum_probs=90.8
Q ss_pred eeEeecCceEEEEE-EeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||.||++ ...+|+.||+|++.+. ....+.+|+++|..+ +||||+++++++...+..||||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l-~hp~iv~~~~~~~~~~~~~lv~Ey~~~ 79 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT-RHPFLTSLKYSFQTKDRLCFVMEYVNG 79 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999997 4678999999999852 233678899888777 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++...+ .+.+..+..+ ++.||.|||+.+|+|||||
T Consensus 80 g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDik 122 (328)
T cd05593 80 GELFFHLSRER------VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLK 122 (328)
T ss_pred CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEecccC
Confidence 69998887532 3444444443 3389999999999888877
No 82
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.60 E-value=3.2e-16 Score=166.16 Aligned_cols=124 Identities=25% Similarity=0.302 Sum_probs=102.3
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|.-.+.||.|+||.||.+ ...+.+.||||+|.-++ -.++.+|+..|.++ +|||+|.+.|||......+||
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l-~HPntieYkgCyLre~TaWLV 104 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQL-RHPNTIEYKGCYLREHTAWLV 104 (948)
T ss_pred HHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhc-cCCCcccccceeeccchHHHH
Confidence 34777889999999999997 47788899999998432 23788999999888 999999999999999999999
Q ss_pred ecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 546 ~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||||-||-.|+|.-++ ..+.+..++.+.. .||.|||+.+.|||||| ||...|
T Consensus 105 MEYClGSAsDlleVhk-----KplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g 163 (948)
T KOG0577|consen 105 MEYCLGSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG 163 (948)
T ss_pred HHHHhccHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC
Confidence 9999998888887653 3445555555554 99999999999999999 565555
No 83
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.60 E-value=6.6e-15 Score=151.23 Aligned_cols=117 Identities=16% Similarity=0.147 Sum_probs=93.6
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
.|.+.+.||+|+||.||++. ..+++.||||++... ..+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTL-KQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhC-CCccccchhhhEecCCEEEEEEe
Confidence 48899999999999999974 567889999998752 234678999988777 99999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+++.+.+.+... ...+++..+..++. .||.|||+.+++|||||
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlk 127 (287)
T cd07848 81 YVEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIK 127 (287)
T ss_pred cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 9996555555432 22355555544443 89999999999888877
No 84
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.60 E-value=7.6e-15 Score=163.73 Aligned_cols=124 Identities=23% Similarity=0.291 Sum_probs=103.6
Q ss_pred EEEeeeEeecCceEEEEEEeeCC-cEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEE-EEEeC------CEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEG-RSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYG-VESDQ------DFVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g-~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g-~~~~~------~~~~ 543 (613)
+.+.++|.+|+|+.||.+....+ ..+|+|++-..+ ...+.+||++|+.+..|+|||.+++ ..... -+++
T Consensus 39 v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~Evl 118 (738)
T KOG1989|consen 39 VTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVL 118 (738)
T ss_pred EEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEE
Confidence 78899999999999999865444 999999987643 3478899999999978999999999 33321 3789
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCC--ceeeccc----eecCCC
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVM--ENTKDIE----LWKANG 602 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~--iiHrDlK----llh~dg 602 (613)
|.||||. |+|-|++..+ ....+.+..+.+++. +|+.+||... ||||||| |++.+|
T Consensus 119 lLmEyC~gg~Lvd~mn~R----lq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g 183 (738)
T KOG1989|consen 119 LLMEYCKGGSLVDFMNTR----LQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADG 183 (738)
T ss_pred eehhhccCCcHHHHHHHH----HhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCC
Confidence 9999999 6999999975 334488888888887 9999999887 9999999 788777
No 85
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.59 E-value=9.7e-15 Score=152.49 Aligned_cols=115 Identities=22% Similarity=0.100 Sum_probs=92.5
Q ss_pred EeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-cc
Q 007199 481 IAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CS 552 (613)
Q Consensus 481 LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-Gs 552 (613)
||+|+||.||++. ..+++.||+|++++. ....+.+|+++|.++ +||||+++++++...+..|+|||||+ |+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 79 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQV-NCPFIVPLKFSFQSPEKLYLVLAFINGGE 79 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence 6999999999974 567889999999752 234677899999887 99999999999999999999999999 69
Q ss_pred HHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 553 LNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 553 L~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|.+++.... .+.+.....+ ++.||.|||+.+|+||||| ++..++
T Consensus 80 L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~ 130 (312)
T cd05585 80 LFHHLQREG------RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG 130 (312)
T ss_pred HHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC
Confidence 999997532 3444444443 3389999999999888887 555544
No 86
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.59 E-value=5.9e-15 Score=158.52 Aligned_cols=117 Identities=23% Similarity=0.261 Sum_probs=98.7
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~-----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
..|.+...||+|.|++|.++ ...++..||+|.+.+.. ...+.+|+++|+.+ +|||||+++.+......+|+||
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l-~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSL-NHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhc-CCcceeeeeeeeeecceeEEEE
Confidence 34899999999999999997 57889999999999732 23578999999877 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
||+. |.++++|..+.+ ..+..+.+. +..+++|||++.|+|||||
T Consensus 135 eya~~ge~~~yl~~~gr------~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk 182 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHGR------MKEKEARAKFRQIVSAVEYCHSKNIVHRDLK 182 (596)
T ss_pred EeccCchhHHHHHhccc------chhhhhhhhhHHHHHHHHHHhhcceeccccc
Confidence 9999 799999997652 222233333 3389999999999999999
No 87
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.59 E-value=1.3e-14 Score=152.66 Aligned_cols=121 Identities=22% Similarity=0.231 Sum_probs=96.0
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-----EEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD-----FVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-----~~~ 543 (613)
|.+.+.||+|+||.||++. ..+|+.||||++... ....+.+|+++|.++ +||||+++++++...+ ..|
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLL-RHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhC-CCCCEeeecceEeccCCCCCceEE
Confidence 7889999999999999974 678999999998742 233688999999887 9999999999886432 589
Q ss_pred EEecCCCccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 544 LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+|||||+++|.+++.... .+++..+..+ ++.||.|||+.+|+||||| |+..++
T Consensus 81 lv~e~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~ 140 (338)
T cd07859 81 VVFELMESDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC 140 (338)
T ss_pred EEEecCCCCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence 999999999999987532 3444444443 3389999999999888877 555554
No 88
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.59 E-value=1.5e-14 Score=154.94 Aligned_cols=122 Identities=17% Similarity=0.146 Sum_probs=98.4
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|++.+.||+|+||.||++. ..+++.+|+|++.+. ..+.+.+|+.++..+ +||||+++++++...+..|+|
T Consensus 43 ~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~-~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 43 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA-NSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC-CCCCCCeEEEEEEcCCEEEEE
Confidence 459999999999999999974 678899999998752 223567888877666 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||||+ |+|.++++.. .+++.++..++ +.||.|||+.+|+||||| |+..++
T Consensus 122 ~Ey~~gg~L~~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~ 179 (371)
T cd05622 122 MEYMPGGDLVNLMSNY-------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG 179 (371)
T ss_pred EcCCCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC
Confidence 99999 6999998753 24555554433 389999999999988887 555554
No 89
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.59 E-value=1.5e-14 Score=151.47 Aligned_cols=118 Identities=19% Similarity=0.154 Sum_probs=92.8
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
++||+|+||.||++. ..+++.||+|.++.. ..+.+..|..++....+||||+++++++...+..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999984 567889999999852 223456677777666699999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++.... .+++..+..+ ++.||.|||+.+|+||||| ++..++
T Consensus 81 g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~ 133 (316)
T cd05592 81 GDLMFHIQSSG------RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG 133 (316)
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC
Confidence 69999997542 3445544444 3389999999999888887 555554
No 90
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.59 E-value=2.2e-14 Score=149.40 Aligned_cols=117 Identities=15% Similarity=0.098 Sum_probs=95.6
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|...+.||+|+||.||++. ..+++.||+|+++.. ....+.+|++++.++ +||||+++++++...+..++||||
T Consensus 7 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred ceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhC-CCCCcceEEEEEeeCCeEEEEEeC
Confidence 48899999999999999974 567889999998752 223677899999887 999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
++++|.+++.... ..+....+..+ ++.+|.|||+.+|+|||||
T Consensus 86 ~~~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlk 131 (309)
T cd07872 86 LDKDLKQYMDDCG-----NIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLK 131 (309)
T ss_pred CCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 9999999887532 23444444443 3489999999999887777
No 91
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.59 E-value=2.2e-14 Score=151.08 Aligned_cols=122 Identities=19% Similarity=0.122 Sum_probs=97.9
Q ss_pred EEEeeeEeecCceEEEEEE----eeCCcEEEEEEeecc-------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG----NYEGRSVAVKRLVKT-------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~----~~~g~~VAVK~l~~~-------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
|++.+.||+|+||.||++. ..+++.||+|++.+. ..+.+.+|++++.++.+||||+++++++...+..+
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLH 81 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEE
Confidence 7889999999999999864 246889999999752 22357789988988867999999999999999999
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+|||||+ |+|.+++.... .+++..+..++ +.+|.|||+.+++||||| |+..++
T Consensus 82 lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~ 142 (332)
T cd05614 82 LILDYVSGGEMFTHLYQRD------NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG 142 (332)
T ss_pred EEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC
Confidence 9999999 69999997532 34455544443 389999999999888887 555554
No 92
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.58 E-value=1.6e-14 Score=152.07 Aligned_cols=112 Identities=17% Similarity=0.094 Sum_probs=92.0
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
++||+|+||.||++. ..+++.||+|++++. ..+.+.+|+.++..+.+||||+++++++...+..|||||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 469999999999974 677899999999862 223577898888887789999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++... ..+++..+..++. .||.|||+.+++|||||
T Consensus 81 g~L~~~~~~~------~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk 123 (329)
T cd05588 81 GDLMFHMQRQ------RKLPEEHARFYSAEISLALNFLHERGIIYRDLK 123 (329)
T ss_pred CCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence 6999988753 2355555554443 89999999999988877
No 93
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.58 E-value=3e-15 Score=156.60 Aligned_cols=125 Identities=26% Similarity=0.308 Sum_probs=106.3
Q ss_pred ccccccCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccchH-----HHHHHHHHHHhcCCCCcceeEEEEEEeC
Q 007199 466 VDGRRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQ 539 (613)
Q Consensus 466 ~~~~~i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~~-----~~~~Ei~~L~~l~~HpnIV~l~g~~~~~ 539 (613)
..+-.|...|.+.+.||+|.|..|-++ +.++|..||||++.+...+ .+..|++.| ++.+|||||+||++...+
T Consensus 11 i~DgkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCM-KLVQHpNiVRLYEViDTQ 89 (864)
T KOG4717|consen 11 IYDGKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCM-KLVQHPNIVRLYEVIDTQ 89 (864)
T ss_pred ccccceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHH-HHhcCcCeeeeeehhccc
Confidence 344567778999999999999999987 6899999999999985443 678999888 555999999999999999
Q ss_pred CEEEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 540 DFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 540 ~~~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
..+|||+|+-. |+|+|||-++. ..+.++.+..+++ .|+.|+|+..++|||||
T Consensus 90 TKlyLiLELGD~GDl~DyImKHe-----~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLK 145 (864)
T KOG4717|consen 90 TKLYLILELGDGGDLFDYIMKHE-----EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLK 145 (864)
T ss_pred ceEEEEEEecCCchHHHHHHhhh-----ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCC
Confidence 99999999999 69999998853 4566777777776 78889999999988887
No 94
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.58 E-value=2e-14 Score=147.98 Aligned_cols=117 Identities=21% Similarity=0.108 Sum_probs=95.5
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|+..+.||+|+||+||++. ..+++.||||.+.... ...+.+|++++.++ +||||+++++++...+..++|||
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhc-CCCCEeeeeeeecCCCeEEEEEe
Confidence 6788999999999999974 5678999999997522 23567899999888 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
||+ |+|.+++... ....+++..+..++. .++.|||+.+++|||||
T Consensus 81 ~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlk 129 (285)
T cd05605 81 LMNGGDLKFHIYNM----GNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLK 129 (285)
T ss_pred ccCCCcHHHHHHhc----CcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCC
Confidence 999 6999888753 223455555554443 89999999999988877
No 95
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.58 E-value=1.5e-14 Score=151.73 Aligned_cols=118 Identities=22% Similarity=0.217 Sum_probs=94.3
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
++||+|+||+||++. ..+++.||||++++. ..+.+..|+.++....+||||+++++++...+..|+|||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999974 567899999999752 234667888888777689999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++...+ .+++..+..++ +.||.|||+.+++||||| ++..++
T Consensus 81 g~L~~~i~~~~------~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~ 133 (320)
T cd05590 81 GDLMFHIQKSR------RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG 133 (320)
T ss_pred chHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC
Confidence 69999987542 34444444433 389999999999888887 555554
No 96
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.58 E-value=1.4e-14 Score=151.85 Aligned_cols=118 Identities=21% Similarity=0.174 Sum_probs=93.7
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
++||+|+||.||++. ..+++.||+|++++. ..+.+..|.+++..+.+||||+++++++...+..|||||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 469999999999984 567889999999852 223567888888777789999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++...+ .+++..+..++ ..||.|||+.+++||||| ++..++
T Consensus 81 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~ 133 (321)
T cd05591 81 GDLMFQIQRSR------KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG 133 (321)
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence 69999987542 34444444333 389999999999888887 555554
No 97
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.58 E-value=2.6e-14 Score=150.59 Aligned_cols=117 Identities=17% Similarity=0.113 Sum_probs=94.4
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.+.||+|+||.||++. ..+++.+|+|++.+. ....+.+|+.++... +|+||+++++++.+.+..||||
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG-DNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCEEEEEE
Confidence 48889999999999999974 567889999998752 223577888877666 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
||++ |+|.++++... ..+++..+..++ +.++.|||+.+++|||||
T Consensus 81 ey~~~g~L~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlk 129 (332)
T cd05623 81 DYYVGGDLLTLLSKFE-----DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIK 129 (332)
T ss_pred eccCCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCC
Confidence 9999 79999998632 234444444433 389999999999888877
No 98
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.58 E-value=1.9e-14 Score=151.67 Aligned_cols=118 Identities=18% Similarity=0.125 Sum_probs=94.8
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||+||++. ..+++.||+|++++. ..+.+.+|+.++.++.+||||+++++++...+..|+|||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 479999999999974 677899999999863 223577888888777799999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++... ..+++..+..++. .|+.|||+.+++||||| ++..++
T Consensus 81 ~~L~~~~~~~------~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~ 133 (329)
T cd05618 81 GDLMFHMQRQ------RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG 133 (329)
T ss_pred CCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC
Confidence 6999888753 2355555554443 89999999999888887 555554
No 99
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.58 E-value=7.6e-15 Score=157.55 Aligned_cols=88 Identities=24% Similarity=0.279 Sum_probs=74.8
Q ss_pred ceEEEeeeEeecCceEEEEEE------eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG------NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~------~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+.|.+.+.||+|+||.||++. ..++..||||+++.. ..+.+.+|+++|..+.+||||++++++|...+..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 348899999999999999973 234568999999752 2346889999998776899999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHh
Q 007199 543 YLSLERCT-CSLNDLIYVL 560 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~ 560 (613)
++|||||+ |+|.++++..
T Consensus 115 ~lv~E~~~~g~L~~~l~~~ 133 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRK 133 (375)
T ss_pred eeeehhccCCcHHHHHHhc
Confidence 99999999 7999999764
No 100
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.58 E-value=2e-14 Score=151.04 Aligned_cols=111 Identities=21% Similarity=0.127 Sum_probs=89.4
Q ss_pred eeEeecCceEEEEE-EeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||.||++ ...+|+.||+|.+.+. ....+.+|++++..+ +||||+++++++...+..||||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~-~hp~i~~~~~~~~~~~~~~lv~E~~~~ 79 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS-RHPFLTALKYSFQTHDRLCFVMEYANG 79 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999997 4678999999999862 223567888888777 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhc-CCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLP-VMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~-~~iiHrDlK 596 (613)
|+|.+++...+ .+++..+..++ +.||.|||+ .+++|||||
T Consensus 80 ~~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDik 123 (325)
T cd05594 80 GELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLK 123 (325)
T ss_pred CcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence 69999887532 34555554443 389999997 788877766
No 101
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.58 E-value=2.1e-14 Score=150.37 Aligned_cols=118 Identities=19% Similarity=0.142 Sum_probs=94.1
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
++||+|+||.||++. ..+|+.||+|++++. ..+....|..++....+||||+++++++...+.+|+|||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 479999999999974 567899999999852 233567788788766799999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++.... .+++.++..++ +.||.|||+.+++||||| ++..++
T Consensus 81 g~L~~~i~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~ 133 (316)
T cd05620 81 GDLMFHIQDKG------RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG 133 (316)
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence 69999987532 34555554433 389999999999988887 555544
No 102
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.58 E-value=2.1e-14 Score=150.34 Aligned_cols=117 Identities=23% Similarity=0.165 Sum_probs=93.6
Q ss_pred eeEeecCceEEEEEE----eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 479 KEIAKGSNGTVVLEG----NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~----~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
+.||+|+||.||++. ..+|+.||+|++... ....+.+|+++|.++ +||||+++++++...+..|+|||||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV-NHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCEEEEEEcCC
Confidence 579999999999864 356889999999862 223567899888887 9999999999999999999999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+ |+|.+++... ..+++..+..++. .||.|||+.+++||||| ++..++
T Consensus 81 ~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~ 135 (318)
T cd05582 81 RGGDLFTRLSKE------VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG 135 (318)
T ss_pred CCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC
Confidence 9 6999999753 2345555444443 89999999999888887 555444
No 103
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.58 E-value=2e-14 Score=150.82 Aligned_cols=118 Identities=23% Similarity=0.207 Sum_probs=91.7
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||+||++. ..+|+.||+|++.+. ....+.+|...+.+.++||||+++++++...+..|+|||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 479999999999974 578999999999752 123455666555555599999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++.... .+++..+..+ ++.||.|||+.+|+||||| |+..++
T Consensus 81 g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~ 133 (323)
T cd05575 81 GELFFHLQRER------SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG 133 (323)
T ss_pred CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC
Confidence 69999987532 3445444443 3489999999999988887 555554
No 104
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.58 E-value=1.9e-14 Score=151.13 Aligned_cols=118 Identities=22% Similarity=0.218 Sum_probs=91.8
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||+||++. ..+|+.+|+|++.+. ....+..|...+.+.++||||+++++++...+..|+|||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 469999999999974 678999999999752 223556666555555599999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++.... .+++..+..+ ++.||.|||+.+++||||| |+..++
T Consensus 81 ~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~ 133 (325)
T cd05604 81 GELFFHLQRER------SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG 133 (325)
T ss_pred CCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence 69998887532 3444444443 3489999999999998888 555554
No 105
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.58 E-value=2.3e-14 Score=150.46 Aligned_cols=122 Identities=20% Similarity=0.146 Sum_probs=97.8
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|.+.+.||+|+||+||++. ..+|+.||+|++.+. ..+.+..|++++..+.+|++|+++++++...+..|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05615 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVME 81 (323)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEc
Confidence 6778999999999999974 678999999999852 223567888888777567889999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||+ |+|.+++.... .+++..+..++. .|+.|||+.+++||||| ++..++
T Consensus 82 y~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~ 138 (323)
T cd05615 82 YVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG 138 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence 999 69999987532 355555555444 89999999999998888 555554
No 106
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.58 E-value=2.1e-14 Score=144.92 Aligned_cols=116 Identities=22% Similarity=0.226 Sum_probs=96.0
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-c
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-C 551 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-G 551 (613)
|++.+.||+|+||.||++...++..+|+|.+... ..+.+.+|+++|.++ +||||+++++++...+..++||||++ |
T Consensus 6 ~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv~e~~~~~ 84 (256)
T cd05114 6 LTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKL-SHPKLVQLYGVCTQQKPLYIVTEFMENG 84 (256)
T ss_pred cEEeeEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHC-CCCCceeEEEEEccCCCEEEEEEcCCCC
Confidence 7888999999999999987777778999988753 345788999999887 99999999999999999999999999 6
Q ss_pred cHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+|.++++... ..++......++. .++.|||+.+++|||+|
T Consensus 85 ~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 127 (256)
T cd05114 85 CLLNYLRQRQ-----GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLA 127 (256)
T ss_pred cHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHCCccccccC
Confidence 9999997532 2344444444433 89999999999888777
No 107
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.57 E-value=3.1e-14 Score=149.51 Aligned_cols=122 Identities=19% Similarity=0.137 Sum_probs=95.8
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|.+.+.||+|+||.||++. ..+++.||||++.+. ..+.+..|++++..+.+|++|+++++++...+.+|+|||
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVME 81 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEc
Confidence 7889999999999999984 567889999999752 234677888888777445678999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||+ |+|.+++.... .+.+..+..++ +.||.|||+.+|+||||| |+..++
T Consensus 82 ~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~ 138 (324)
T cd05587 82 YVNGGDLMYHIQQVG------KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG 138 (324)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC
Confidence 999 69999997532 34444444443 389999999999888777 555444
No 108
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.57 E-value=3.2e-14 Score=149.34 Aligned_cols=122 Identities=19% Similarity=0.138 Sum_probs=97.0
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|.+.+.||+|+||.||++. ..+++.||||.+.+. ..+.+..|.+++....+|++|+++++++...+..|+|||
T Consensus 2 f~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E 81 (323)
T cd05616 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVME 81 (323)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEc
Confidence 7788999999999999974 567889999998852 123466777777777678999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|++ |+|.+++.... .+++..+..++. .||.|||+.+|+||||| |++.++
T Consensus 82 ~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~ 138 (323)
T cd05616 82 YVNGGDLMYQIQQVG------RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG 138 (323)
T ss_pred CCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC
Confidence 999 69999987532 344555444443 89999999999888877 555554
No 109
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.57 E-value=2.6e-14 Score=149.65 Aligned_cols=118 Identities=19% Similarity=0.152 Sum_probs=93.2
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||+||++. ..+++.||||+++.. ..+.+..|..++....+||||+++++++.+.+.+++||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 469999999999985 567889999999863 223566777777766699999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++.... .+++.....+ ++.||.|||+.+++||||| |++.++
T Consensus 81 g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~ 133 (316)
T cd05619 81 GDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG 133 (316)
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC
Confidence 69999997532 2344444333 3489999999999988888 555554
No 110
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.57 E-value=2.3e-14 Score=150.18 Aligned_cols=118 Identities=22% Similarity=0.195 Sum_probs=90.5
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
++||+|+||.||++. ..+++.||+|++.+. ....+.+|...+.+.++||||+++++++...+..|+|||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 479999999999984 577899999999752 122456666554454599999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++... ..+.+..+..+ +..+|.|||+.+|+||||| ++..++
T Consensus 81 ~~L~~~l~~~------~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~ 133 (321)
T cd05603 81 GELFFHLQRE------RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG 133 (321)
T ss_pred CCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence 6999888743 23444444333 3489999999999988888 555554
No 111
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.57 E-value=2.6e-14 Score=150.10 Aligned_cols=117 Identities=23% Similarity=0.170 Sum_probs=92.3
Q ss_pred eeEeecCceEEEEEEe----eCCcEEEEEEeecc-------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 479 KEIAKGSNGTVVLEGN----YEGRSVAVKRLVKT-------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~----~~g~~VAVK~l~~~-------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+.||+|+||.||++.. .+++.||||.+++. ....+.+|+++|..+ +||||+++++++...+..|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAV-KHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhC-CCCchhceeeEEecCCeEEEEEe
Confidence 5799999999999743 46889999999852 123567899988877 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|++ |+|.+++.... .+.+..+. ..+..+|.|||+.+|+||||| |+..++
T Consensus 81 ~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~ 137 (323)
T cd05584 81 YLSGGELFMHLEREG------IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG 137 (323)
T ss_pred CCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence 999 69999997532 23333333 334489999999999888877 555554
No 112
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=99.57 E-value=2.5e-14 Score=153.30 Aligned_cols=159 Identities=18% Similarity=0.237 Sum_probs=121.4
Q ss_pred CCCCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCC--ceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeeccc
Q 007199 44 LPPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGR--PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSS 121 (613)
Q Consensus 44 ~~~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~--~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~ 121 (613)
++..+++||+++.||.|+|+|+.+|+++|++.... ...++... ..+ ..++.++.||.+||+|.++|.+ +|.++
T Consensus 64 ~~~~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~--~~~--G~i~~g~~~g~~y~ld~~~G~~-~W~~~ 138 (370)
T COG1520 64 PADGDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPIL--GSD--GKIYVGSWDGKLYALDASTGTL-VWSRN 138 (370)
T ss_pred cEeeCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceE--EeC--CeEEEecccceEEEEECCCCcE-EEEEe
Confidence 36789999999999999999999999999988765 33333111 111 2344455699999999999999 99999
Q ss_pred HHH--HhhhCceeecCCcEEEEeecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccccc
Q 007199 122 AEE--YIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKR 199 (613)
Q Consensus 122 ~~~--~v~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (613)
... .+.+.|++. |+.||+++.++++|+||+.||+.+|++....+ . . .. .+..+. .
T Consensus 139 ~~~~~~~~~~~v~~-~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~-~-~---~~------------~~~~~~-----~ 195 (370)
T COG1520 139 VGGSPYYASPPVVG-DGTVYVGTDDGHLYALNADTGTLKWTYETPAP-L-S---LS------------IYGSPA-----I 195 (370)
T ss_pred cCCCeEEecCcEEc-CcEEEEecCCCeEEEEEccCCcEEEEEecCCc-c-c---cc------------cccCce-----e
Confidence 998 344444455 99999999889999999999999999987642 1 0 00 011111 1
Q ss_pred cccEEEEEee--eeEEEEEeCCCCceEEEEEec
Q 007199 200 IRQLVYIMRT--DYVLQSTSQDSGEVLWNVAYA 230 (613)
Q Consensus 200 ~~~~v~igr~--d~~l~a~d~~~G~~~Wn~t~~ 230 (613)
.++.||++.. ++.++|+|+.+|..+|+..+.
T Consensus 196 ~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~~~~ 228 (370)
T COG1520 196 ASGTVYVGSDGYDGILYALNAEDGTLKWSQKVS 228 (370)
T ss_pred ecceEEEecCCCcceEEEEEccCCcEeeeeeee
Confidence 3679999988 789999999999999996543
No 113
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.57 E-value=2.5e-14 Score=154.43 Aligned_cols=114 Identities=18% Similarity=0.086 Sum_probs=94.2
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCCc
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC 551 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~G 551 (613)
..|++.+.||+|+||.||++ ...+++.||+|.... +.+.+|+++|.++ +||||+++++++......++|||++.+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---~~~~~E~~il~~l-~HpnIv~~~~~~~~~~~~~lv~e~~~~ 167 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---GGTATEAHILRAI-NHPSIIQLKGTFTYNKFTCLILPRYKT 167 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---hhhHHHHHHHHhC-CCCCCCCEeEEEEECCeeEEEEecCCC
Confidence 34999999999999999997 467899999997653 4578999999888 999999999999999999999999999
Q ss_pred cHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 552 SLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
+|.+++...+ .++...+.. .++.||.|||+.+|+|||||
T Consensus 168 ~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiK 209 (391)
T PHA03212 168 DLYCYLAAKR------NIAICDILAIERSVLRAIQYLHENRIIHRDIK 209 (391)
T ss_pred CHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 9999987542 234443333 33489999999999877766
No 114
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.56 E-value=1.1e-14 Score=156.02 Aligned_cols=115 Identities=19% Similarity=0.193 Sum_probs=93.8
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-----EEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD-----FVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-----~~~ 543 (613)
|+..+.||+|+||.||++. ..+|+.||||++... ..+.+.+|+++|..+ +||||+++++++...+ ..|
T Consensus 2 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 2 VEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFF-KHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhC-CCCCcCCHhheecCCCccccceEE
Confidence 6778899999999999975 578999999998752 234688999999887 9999999999998876 899
Q ss_pred EEecCCCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
+||||+.++|.+++... ..+....+..++ +.||.|||+.+++|||||
T Consensus 81 lv~e~~~~~l~~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlk 130 (372)
T cd07853 81 VVTELMQSDLHKIIVSP------QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIK 130 (372)
T ss_pred EEeeccccCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence 99999999999888642 245555554444 389999999999887777
No 115
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.56 E-value=4.2e-15 Score=157.67 Aligned_cols=124 Identities=22% Similarity=0.200 Sum_probs=102.1
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccch-----------HHHHHHHHHHHhcCC---CCcceeEEEEEEeC
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHH-----------DVALKEIQNLIASDQ---HPNIVRWYGVESDQ 539 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~-----------~~~~~Ei~~L~~l~~---HpnIV~l~g~~~~~ 539 (613)
|...+.||+|+||.|+.| .+.+..+|+||.|.++.. ...-.||++|..+ + |+||++++++|+++
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l-~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATL-NKHSHENILKLLDFFEDD 641 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHh-hhcCccchhhhhheeecC
Confidence 889999999999999998 567778899999987421 1456899999887 5 99999999999999
Q ss_pred CEEEEEecCCC-c-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 540 DFVYLSLERCT-C-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 540 ~~~~LV~E~~~-G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+++||+||--. | +|+++|..+. ......-..+.+++..+++|||..+||||||| +++.+|
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~kp---~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFKP---RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhccC---ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC
Confidence 99999999887 8 9999998653 22222334455555589999999999999999 888887
No 116
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.56 E-value=3.7e-14 Score=145.31 Aligned_cols=118 Identities=24% Similarity=0.233 Sum_probs=97.2
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|...+.||+|+||.||++. ..++..||+|.++.. ..+.+.+|+.++.++ +||||+++++++..++..|+||||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-QHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhc-CCCCEeeeEEEEeeCCeEEEEEec
Confidence 7788999999999999975 567899999998742 234688999988888 999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++|+|.+++.... ....++...+..++. .||.|||..+++|||+|
T Consensus 81 ~~~~l~~~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~ 128 (285)
T cd07861 81 LSMDLKKYLDSLP---KGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLK 128 (285)
T ss_pred CCCCHHHHHhcCC---CCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence 9999999987542 223456655544443 89999999999988887
No 117
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.56 E-value=5.3e-14 Score=155.86 Aligned_cols=120 Identities=16% Similarity=0.121 Sum_probs=94.6
Q ss_pred eEEEeeeEeecCceEEEEEE-eeC-CcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYE-GRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~-g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|.+.+.||+|+||.||++. ..+ ++.||+|.+.... ...+.+|+++|..+ +|||||++++++...+..||||||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l-~Hpniv~~~~~~~~~~~~~lv~E~ 146 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAAC-DHFGIVKHFDDFKSDDKLLLIMEY 146 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhC-CCCCEeEEEEEEEECCEEEEEEEC
Confidence 38999999999999999974 344 6789999776532 23677899999887 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|+ |+|.++|+.... ....+.+..+..+ ++.||+|||+.+|+|||||
T Consensus 147 ~~gg~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlk 196 (478)
T PTZ00267 147 GSGGDLNKQIKQRLK--EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLK 196 (478)
T ss_pred CCCCCHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcC
Confidence 99 699999875321 2223455444443 3489999999999888776
No 118
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.56 E-value=5.4e-14 Score=145.80 Aligned_cols=123 Identities=16% Similarity=0.097 Sum_probs=99.1
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|...+.||+|+||.||++. ..+++.||+|.++.. ....+.+|++++.++ +||||+++++++...+..++||||
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhc-CCCCcceEEEEEecCCeEEEEEec
Confidence 38999999999999999974 567899999998742 233677899999888 999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
++++|.+++.... ..+.+..+..++ +.+|.|||+.+++||||| +++.++
T Consensus 86 ~~~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~ 141 (301)
T cd07873 86 LDKDLKQYLDDCG-----NSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG 141 (301)
T ss_pred cccCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC
Confidence 9999999987632 234444444443 389999999999888777 555444
No 119
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.56 E-value=3.3e-14 Score=163.46 Aligned_cols=116 Identities=22% Similarity=0.205 Sum_probs=95.3
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.+.||+|+||+||++. ..+++.||||+++... ...+.+|+.++..+ +||||+++++++...+.+||||
T Consensus 5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l-~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALS-KSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhc-CCCCcCeEEEEEEECCEEEEEE
Confidence 48899999999999999985 5578999999998532 24788899888666 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|||. |+|.++++... .+.+..+..++ +.||.|||..+|+|||||
T Consensus 84 Ey~~g~~L~~li~~~~------~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLK 131 (669)
T cd05610 84 EYLIGGDVKSLLHIYG------YFDEEMAVKYISEVALALDYLHRHGIIHRDLK 131 (669)
T ss_pred eCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCcc
Confidence 9998 69999997532 34444444433 389999999999888887
No 120
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.56 E-value=2.2e-14 Score=150.69 Aligned_cols=115 Identities=17% Similarity=0.088 Sum_probs=91.6
Q ss_pred EeeeEeec--CceEEEEE-EeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 477 FNKEIAKG--SNGTVVLE-GNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 477 ~~~~LG~G--~fG~Vyk~-~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
+.++||+| +|++||++ ...+|+.||+|++... ..+.+.+|++++..+ +||||++++++|..++..++||||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLF-NHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEECCEEEEEEec
Confidence 45689999 78899997 4788999999999853 223577899888666 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|+ |+|.+++..+. ...++...+..++ +.||.|||+.+++|||||
T Consensus 81 ~~~~~l~~~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlk 128 (327)
T cd08227 81 MAYGSAKDLICTHF----MDGMSELAIAYILQGVLKALDYIHHMGYVHRSVK 128 (327)
T ss_pred cCCCcHHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence 99 79999997642 2234444444444 389999999999888776
No 121
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.56 E-value=5.6e-15 Score=156.21 Aligned_cols=124 Identities=17% Similarity=0.210 Sum_probs=104.3
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCE-EEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDF-VYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~-~~LV~ 546 (613)
.|...+.+|+|+||.++.. +..++..+++|.+... .++...+|+.++.++ +|||||.+.+.|..++. ++|||
T Consensus 5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~-~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKL-LHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhc-cCCCeeeeccchhcCCceEEEEE
Confidence 4788899999999999985 5788889999998852 234788999999886 99999999999999988 99999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+||+ |+|.+.|...+ ...++++.+.+++. .|+.|||+..|+||||| |+.++.
T Consensus 84 ~Y~eGg~l~~~i~~~k----~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~ 143 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK----GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK 143 (426)
T ss_pred eecCCCCHHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC
Confidence 9999 69999999763 34566776666666 79999999999998888 666554
No 122
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.56 E-value=4.8e-14 Score=148.04 Aligned_cols=121 Identities=19% Similarity=0.174 Sum_probs=93.6
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHh--cCCCCcceeEEEEEEeCCEEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIA--SDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~--l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
|.+.+.||+|+||.||++. ..+++.||||++++. ..+.+.+|++++.. .++||||+++++++...+..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 5678899999999999974 677899999999852 22356677665532 24899999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||||+ |+|..+++.. .+.+..+..++. .|+.|||+.+++||||| ++..++
T Consensus 81 ~E~~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~ 138 (324)
T cd05589 81 MEYAAGGDLMMHIHTD-------VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG 138 (324)
T ss_pred EcCCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC
Confidence 99999 6998887532 344444444433 89999999999988887 555554
No 123
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.56 E-value=4.4e-14 Score=148.83 Aligned_cols=117 Identities=18% Similarity=0.152 Sum_probs=95.0
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+.|+..+.||+|+||.||++. ..++..+|+|.+... ..+.+.+|+++|.++ +||||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEECCEEEEEee
Confidence 348999999999999999974 567889999998753 234688999999888 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcC-Cceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPV-MENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~-~iiHrDlK 596 (613)
|++ |+|.+++.... .+++..+..++. .++.|||.. +|+|||||
T Consensus 84 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlk 131 (331)
T cd06649 84 HMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVK 131 (331)
T ss_pred cCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCC
Confidence 999 69999997532 344555444443 899999975 57776655
No 124
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.56 E-value=3.7e-14 Score=149.63 Aligned_cols=117 Identities=17% Similarity=0.165 Sum_probs=94.4
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+.|+..+.||+|+||.||++. ..++..+|+|.+... ..+.+.+|+++|.++ +||||++++++|...++.+||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCcccceeEEEEECCEEEEEEe
Confidence 348899999999999999974 567889999988753 224688999999888 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcC-Cceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPV-MENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~-~iiHrDlK 596 (613)
|++ |+|.++++... .+++..+..+ ++.++.|||.. +++|||||
T Consensus 84 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlk 131 (333)
T cd06650 84 HMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVK 131 (333)
T ss_pred cCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCC
Confidence 999 69999997532 2344444333 33899999974 68777776
No 125
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.56 E-value=2e-16 Score=152.11 Aligned_cols=123 Identities=19% Similarity=0.116 Sum_probs=97.5
Q ss_pred ccCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 470 RIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 470 ~i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~-----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
.+.+.|++.++||+|.|+.||++ ...+|+.+|+|++.. ...+++.+|+++-..+ +|||||+|+..+....+.|
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~L-qHP~IvrL~~ti~~~~~~y 86 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL-QHPNIVRLHDSIQEESFHY 86 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhc-CCCcEeehhhhhcccceeE
Confidence 34455888899999999999997 688999999887763 4667899999766555 9999999999999999999
Q ss_pred EEecCCCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
||+|+|.| +|..-|-.+. -.+........+++.+++.|+|.++|+|||+|
T Consensus 87 lvFe~m~G~dl~~eIV~R~---~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvk 137 (355)
T KOG0033|consen 87 LVFDLVTGGELFEDIVARE---FYSEADASHCIQQILEALAYCHSNGIVHRDLK 137 (355)
T ss_pred EEEecccchHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhcCceeccCC
Confidence 99999995 8876555431 22223334556666699999999999998886
No 126
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.55 E-value=4.4e-14 Score=148.39 Aligned_cols=118 Identities=23% Similarity=0.182 Sum_probs=89.9
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||+||++. ..+++.||+|++.+.. ...+.+|...+.+.++||||+++++++...+..|+|||||+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 469999999999974 5678899999997521 22445555554454599999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++.... .+.+..+. ..++.||.|||+.+|+||||| ++..++
T Consensus 81 ~~L~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~ 133 (325)
T cd05602 81 GELFYHLQRER------CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG 133 (325)
T ss_pred CcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC
Confidence 69999997532 23344433 334489999999999998887 555544
No 127
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.55 E-value=4.4e-14 Score=148.61 Aligned_cols=118 Identities=18% Similarity=0.108 Sum_probs=94.6
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||+||++. ..+++.||+|++++. ..+.+.+|+.++.++.+||||+++++++...+.+|+|||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 469999999999974 567889999999863 223577899888887789999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++...+ .+++..+..++. .|+.|||+.+++||||| ++..++
T Consensus 81 ~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~ 133 (327)
T cd05617 81 GDLMFHMQRQR------KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG 133 (327)
T ss_pred CcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC
Confidence 69999887532 355555554443 89999999999888877 444444
No 128
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.55 E-value=4.5e-14 Score=142.84 Aligned_cols=119 Identities=20% Similarity=0.170 Sum_probs=97.7
Q ss_pred ceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
+.|++.+.||+|+||.||++...++..||+|.+... ..+.+.+|+.++.++ +|+||+++++++...+..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRLYAVVTKEEPIYIITEYMA 84 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCcEEEEecCC
Confidence 348999999999999999987777888999998753 345788999999887 99999999999999999999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|+|.++++... ....+......++ +.++.|||..+++|||||
T Consensus 85 ~~~L~~~l~~~~----~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~ 130 (261)
T cd05072 85 KGSLLDFLKSDE----GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLR 130 (261)
T ss_pred CCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 69999997642 2234444444333 389999999999888777
No 129
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.55 E-value=3.7e-14 Score=155.74 Aligned_cols=116 Identities=16% Similarity=0.102 Sum_probs=95.2
Q ss_pred CceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 472 ~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
+..|.+.+.||+|+||.||++. ..+++.||||.... ..+.+|+++|.++ +|+|||++++++...+..+||||++.
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---~~~~~E~~iL~~L-~HpnIv~l~~~~~~~~~~~lv~e~~~ 243 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---ASSVHEARLLRRL-SHPAVLALLDVRVVGGLTCLVLPKYR 243 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---cCHHHHHHHHHHC-CCCCCCcEEEEEEECCEEEEEEEccC
Confidence 3458999999999999999974 56788999996442 3467899999888 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++.... ..+....+.+++. .+|.|||+.+|+|||||
T Consensus 244 ~~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLK 287 (461)
T PHA03211 244 SDLYTYLGARL-----RPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIK 287 (461)
T ss_pred CCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCC
Confidence 99999987532 2355555554444 89999999999888877
No 130
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.55 E-value=4.9e-15 Score=136.41 Aligned_cols=122 Identities=25% Similarity=0.184 Sum_probs=98.5
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccch-----HHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~-----~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|.-.+.||+|.||+|+++. ..+++.||+|+++.... ....+||-+|+.+ +|.|||++++....+..+-||+||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkel-khknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHh-hhcceeehhhhhccCceeEEeHHH
Confidence 4456789999999999975 77889999999986332 2688999777777 999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|..+|..+..... ..+.......++. .|+.++|+.++.|||+| ++++||
T Consensus 83 cdqdlkkyfdsln-----g~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng 138 (292)
T KOG0662|consen 83 CDQDLKKYFDSLN-----GDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG 138 (292)
T ss_pred hhHHHHHHHHhcC-----CcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC
Confidence 9999999988643 3344433333333 89999999999888887 666666
No 131
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.55 E-value=8e-14 Score=143.48 Aligned_cols=124 Identities=18% Similarity=0.098 Sum_probs=100.0
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+.|+..+.||+|+||.||++. ..+++.||+|.+... ....+.+|++++.++ +|+||+++++++...+..++|||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDL-KHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhC-CCcceeeEEEEEecCCeEEEEEe
Confidence 348899999999999999975 557899999998752 223567899999888 99999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|++++|.+++.... ..+....+..++ +.||.|||+.+++||||| ++..++
T Consensus 84 ~~~~~L~~~~~~~~-----~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~ 140 (291)
T cd07844 84 YLDTDLKQYMDDCG-----GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG 140 (291)
T ss_pred cCCCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC
Confidence 99999999987642 234444444443 389999999999988888 555544
No 132
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.55 E-value=2.1e-14 Score=154.11 Aligned_cols=88 Identities=26% Similarity=0.294 Sum_probs=74.0
Q ss_pred ceEEEeeeEeecCceEEEEEE------eeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG------NYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~------~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+.|++.+.||+|+||.||++. ..++..||||+++... .+.+.+|++++..+.+|+||++++++|...+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 348999999999999999863 2234579999997532 346789999997776899999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHh
Q 007199 543 YLSLERCT-CSLNDLIYVL 560 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~ 560 (613)
++|||||+ |+|.++++..
T Consensus 118 ~lv~ey~~~g~L~~~l~~~ 136 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKK 136 (374)
T ss_pred EEeHhhccCCcHHHHHHhh
Confidence 99999999 7999999754
No 133
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.55 E-value=2.9e-14 Score=149.01 Aligned_cols=116 Identities=20% Similarity=0.105 Sum_probs=90.5
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCc----EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGR----SVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~----~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
.|+..+.||+|+||.||++. ..++. .||+|.++.. ..+++.+|+.++..+ +||||++++++|... ..++
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-DNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEcCC-Ccee
Confidence 38899999999999999975 34444 4899998753 234788899888777 999999999999865 5679
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
++||++ |+|.++++... ..++...+.+++ +.||.|||+.+++|||||
T Consensus 86 v~e~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlk 136 (316)
T cd05108 86 ITQLMPFGCLLDYVREHK-----DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLA 136 (316)
T ss_pred eeecCCCCCHHHHHHhcc-----ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccc
Confidence 999999 79999998642 234444444433 389999999999887777
No 134
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.55 E-value=3.5e-14 Score=145.62 Aligned_cols=121 Identities=19% Similarity=0.154 Sum_probs=93.6
Q ss_pred EEEeeeEeecCceEEEEEE-----eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-----~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
|++.+.||+|+||+||++. ..++..||+|.+... ....+.+|++++.++ +||||+++++++...+..|++
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 85 (283)
T cd05090 7 VRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAEL-HHPNIVCLLGVVTQEQPVCML 85 (283)
T ss_pred ceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC-CCCCeeeEEEEEecCCceEEE
Confidence 7888999999999999974 245678999999752 224688999999888 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCC-----------ccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSF-----------EEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~-----------~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|||++ |+|.+++....... ....++......++ ..++.|||+.+++|||||
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlk 151 (283)
T cd05090 86 FEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLA 151 (283)
T ss_pred EEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccc
Confidence 99999 69999997532100 01223444333333 389999999998887777
No 135
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.55 E-value=6.4e-14 Score=143.39 Aligned_cols=121 Identities=18% Similarity=0.177 Sum_probs=96.9
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|++.+.||+|+||.||++. ..+|+.||+|+++... ...+..|+..+.+..+||||+++++++...+..|++|||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 81 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICMEV 81 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhh
Confidence 47889999999999999974 6679999999988632 235666777666666999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcC-Cceeeccc
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPV-MENTKDIE 596 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~-~iiHrDlK 596 (613)
++|+|.+++..... ....+++..+..++. .++.|||++ +++|||||
T Consensus 82 ~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlk 131 (283)
T cd06617 82 MDTSLDKFYKKVYD--KGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVK 131 (283)
T ss_pred hcccHHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCC
Confidence 99999999876432 234566666655554 899999987 88777777
No 136
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.55 E-value=5.2e-14 Score=147.45 Aligned_cols=118 Identities=20% Similarity=0.146 Sum_probs=93.7
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||+||++. ..+++.||||++++. ..+.+.+|++++..+.+||||+++++++...+.+|+|||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 469999999999974 567889999999852 234567888888777689999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++.... .+++..+..++ ..+|.|||+.+++||||| ++..++
T Consensus 81 ~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~ 133 (318)
T cd05570 81 GDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG 133 (318)
T ss_pred CCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC
Confidence 69999887532 34555544443 389999999999888877 555444
No 137
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.55 E-value=4.6e-14 Score=144.91 Aligned_cols=113 Identities=19% Similarity=0.072 Sum_probs=90.5
Q ss_pred EeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-cc
Q 007199 481 IAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CS 552 (613)
Q Consensus 481 LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-Gs 552 (613)
||+|+||+||++. ..+++.||+|.+... ..+.+..|++++..+ +||||+++.+++...+..++|||||+ |+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~g~ 79 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKV-HSRFIVSLAYAFQTKTDLCLVMTIMNGGD 79 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhC-CCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence 6999999999974 678999999998752 224567899888777 99999999999999999999999999 69
Q ss_pred HHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 553 LNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 553 L~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|.+++..... ....+++..+..++ +.++.|||+.+++|||||
T Consensus 80 L~~~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk 124 (280)
T cd05608 80 LRYHIYNVDE--ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLK 124 (280)
T ss_pred HHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 9988865321 22345555554443 389999999999888887
No 138
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.54 E-value=6.2e-14 Score=142.34 Aligned_cols=116 Identities=28% Similarity=0.327 Sum_probs=90.2
Q ss_pred EEeeeEeecCceEEEEEEee-----CCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 476 VFNKEIAKGSNGTVVLEGNY-----EGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 476 ~~~~~LG~G~fG~Vyk~~~~-----~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
...+.||.|.||.||+|... .+..|+||.++.. ..+.+.+|++.+.++ +||||++++|++...+..++||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKL-RHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTH-SBTTBE-EEEEEESSSSEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccc-cccccccccccccccccccccc
Confidence 46789999999999998644 3568999999652 246899999999888 9999999999999888899999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|||+ |+|.++|+.. ....++......++. .||.|||+.+++|+||+
T Consensus 81 e~~~~g~L~~~L~~~----~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~ 130 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSK----NKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLS 130 (259)
T ss_dssp E--TTEBHHHHHHHT----CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred ccccccccccccccc----ccccccccccccccccccccccccccccccccccc
Confidence 9999 7999999975 123344444444443 89999999998887776
No 139
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.54 E-value=6.1e-14 Score=155.56 Aligned_cols=126 Identities=22% Similarity=0.254 Sum_probs=108.2
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec--cchHHHHHHHHHHHhcCCCCcceeEEEEEEe-----CCEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK--THHDVALKEIQNLIASDQHPNIVRWYGVESD-----QDFVYL 544 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~--~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~-----~~~~~L 544 (613)
+.+++.++||+|.+|.||++ ++.+++.+|+|++.. ...++...|.++|+....|||++.++|+|.. ++.++|
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL 98 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL 98 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence 34889999999999999996 689999999999886 4556788889899888899999999999984 468999
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|||||. ||..|+++.. ....+.+.|++.++. .|+.|||...+||||+| |+..+|
T Consensus 99 VMEfC~gGSVTDLVKn~----~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~ 160 (953)
T KOG0587|consen 99 VMEFCGGGSVTDLVKNT----KGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENA 160 (953)
T ss_pred EeeccCCccHHHHHhhh----cccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccC
Confidence 999999 7999999875 355677888877776 89999999999999998 666665
No 140
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.54 E-value=6.4e-14 Score=141.72 Aligned_cols=117 Identities=21% Similarity=0.200 Sum_probs=96.0
Q ss_pred eEEEeeeEeecCceEEEEEEeeCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~--~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
.|.+.+.||+|+||+||++....+..+|+|.+.... .+.+.+|++++.++ +||||+++++++...+..+++|||++
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKL-SHEKLVQLYGVCTKQRPIYIVTEYMSN 83 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcC-CCCCeeeEEEEEccCCCcEEEEEcCCC
Confidence 388899999999999999866566679999988632 45789999999887 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++.... ..+++..+..++. .++.|||+.+++|+|||
T Consensus 84 ~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 127 (256)
T cd05113 84 GCLLNYLREHG-----KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLA 127 (256)
T ss_pred CcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccC
Confidence 69999997632 2345555444443 89999999999888777
No 141
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.54 E-value=1.9e-13 Score=147.64 Aligned_cols=117 Identities=17% Similarity=0.141 Sum_probs=95.1
Q ss_pred cCceEEEeeeEeecCceEEEEEE---eeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLEG---NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~~---~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+...|.+.+.||+|+||.||++. ...++.||+|.+... ..+.+|+++|.++ +||||+++++++......|++||
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~--~~~~~E~~il~~l-~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG--KTPGREIDILKTI-SHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc--ccHHHHHHHHHhc-CCCCccceeeeEeeCCEEEEEeh
Confidence 34569999999999999999974 345678999988753 3457899999887 99999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++.++|.+++... ..+++.++..++. .||.|||..+|+|||||
T Consensus 167 ~~~~~l~~~l~~~------~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlk 212 (392)
T PHA03207 167 KYKCDLFTYVDRS------GPLPLEQAITIQRRLLEALAYLHGRGIIHRDVK 212 (392)
T ss_pred hcCCCHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence 9999999999532 2455555554443 89999999999888777
No 142
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.54 E-value=4.8e-14 Score=152.57 Aligned_cols=88 Identities=24% Similarity=0.277 Sum_probs=74.0
Q ss_pred ceEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+.|.+.+.||+|+||.||+|.. ..+..||||+++.. ..+.+.+|+++|.++..||||++++++|...+..
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~ 116 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPI 116 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCce
Confidence 4488999999999999999742 22347999999752 2347889999998884599999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHh
Q 007199 543 YLSLERCT-CSLNDLIYVL 560 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~ 560 (613)
|||||||+ |+|.++|+..
T Consensus 117 ~lv~Ey~~~g~L~~~l~~~ 135 (400)
T cd05105 117 YIITEYCFYGDLVNYLHKN 135 (400)
T ss_pred EEEEEecCCCcHHHHHHHh
Confidence 99999999 7999999864
No 143
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.54 E-value=1e-13 Score=142.54 Aligned_cols=125 Identities=22% Similarity=0.226 Sum_probs=93.8
Q ss_pred eEEEeeeEeecCceEEEEEEe--eCCcEEEEEEeecc-----chHHHHHHHHHHHhc--CCCCcceeEEEEEEe-----C
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN--YEGRSVAVKRLVKT-----HHDVALKEIQNLIAS--DQHPNIVRWYGVESD-----Q 539 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~--~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l--~~HpnIV~l~g~~~~-----~ 539 (613)
.|.+.+.||+|+||+||++.. .+++.||+|+++.. ....+.+|+.++..+ .+||||++++++|.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 478899999999999999853 35788999998752 223566788777654 379999999999863 3
Q ss_pred CEEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 540 ~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
..+++||||++|+|.+++.... ...+++..+..++. .||.|||+.+++||||| |++.++
T Consensus 82 ~~~~lv~e~~~~~l~~~~~~~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~ 147 (290)
T cd07862 82 TKLTLVFEHVDQDLTTYLDKVP----EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG 147 (290)
T ss_pred CcEEEEEccCCCCHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC
Confidence 4689999999999999997642 22345555544443 89999999999888777 554444
No 144
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.53 E-value=6.7e-14 Score=161.71 Aligned_cols=122 Identities=20% Similarity=0.167 Sum_probs=95.1
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.++||+|+||.||++. ..+|+.||+|+++.. ..+.+.+|++++.++ +||||+++++++...+..|++|
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L-~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADL-IHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhC-CCcCcCeEEEEEeeCCEEEEEE
Confidence 48899999999999999984 567899999999752 134688999999887 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCc-----cccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFE-----EQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~-----~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
|||+ |+|.+++........ ........+.+ .+..||.|||+.+|+|||||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLK 140 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLK 140 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCc
Confidence 9999 599999975321100 11122222233 33389999999999888776
No 145
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.53 E-value=4.7e-14 Score=144.47 Aligned_cols=111 Identities=11% Similarity=-0.038 Sum_probs=86.7
Q ss_pred eEeecCceEEEEEEee-C------------------------CcEEEEEEeeccch---HHHHHHHHHHHhcCCCCccee
Q 007199 480 EIAKGSNGTVVLEGNY-E------------------------GRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVR 531 (613)
Q Consensus 480 ~LG~G~fG~Vyk~~~~-~------------------------g~~VAVK~l~~~~~---~~~~~Ei~~L~~l~~HpnIV~ 531 (613)
.||+|+||.||++... + ...||+|.+..... ..+.+|++++..+ +||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV-SHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC-CCCCeee
Confidence 6899999999996421 1 13589999876433 3677888777666 9999999
Q ss_pred EEEEEEeCCEEEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 532 WYGVESDQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 532 l~g~~~~~~~~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+++++......++|||||+ |+|.+++... ...++..+..+++. .||.|||+.+++|||||
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlk 144 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKE-----KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVC 144 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCC
Confidence 9999999999999999999 6999988753 23456666665554 89999999998877766
No 146
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.53 E-value=1.2e-13 Score=142.26 Aligned_cols=117 Identities=21% Similarity=0.119 Sum_probs=95.6
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|+..+.||+|+||+||++. ..+++.+|+|.+.... ...+.+|+++|.++ +|+||+++++++...+..+++||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKV-NSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHc-CCcCceeEEEEEecCCEEEEEEE
Confidence 6677899999999999974 5688999999987532 23577899999887 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|++ |+|.+++.... ...++...+..++. .++.|||+.+|+|||||
T Consensus 81 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dik 129 (285)
T cd05632 81 IMNGGDLKFHIYNMG----NPGFEEERALFYAAEILCGLEDLHRENTVYRDLK 129 (285)
T ss_pred eccCccHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence 999 69998887532 22455555555444 89999999999988888
No 147
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.53 E-value=6.9e-15 Score=146.31 Aligned_cols=113 Identities=18% Similarity=0.196 Sum_probs=98.6
Q ss_pred eeeEeecCceEEEEE-EeeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-cc
Q 007199 478 NKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CS 552 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-Gs 552 (613)
.++||+|+|+.|-.| .+.+|.++|||++.+. .+..+.+|++++.++..|+||++|+++|++++..|||||-|. |.
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGp 162 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGP 162 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCch
Confidence 467999999999987 5899999999999873 455899999999999999999999999999999999999999 69
Q ss_pred HHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 553 LNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 553 L~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|...|++++ .+.+..+.+++. .||.+||.++|.|||+|
T Consensus 163 lLshI~~~~------~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlK 203 (463)
T KOG0607|consen 163 LLSHIQKRK------HFNEREASRVVKDIASALDFLHTKGIAHRDLK 203 (463)
T ss_pred HHHHHHHhh------hccHHHHHHHHHHHHHHHHHHhhcCcccccCC
Confidence 999998654 556666665555 89999999999988876
No 148
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.53 E-value=9.7e-14 Score=140.51 Aligned_cols=119 Identities=18% Similarity=0.125 Sum_probs=97.6
Q ss_pred ceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
+.|.+.+.||+|+||.||++...+++.||+|.++.. ..+.+.+|++++.++ +||||+++++++...+..+++|||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~ 84 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKL-RHPKLIQLYAVCTLEEPIYIVTELMK 84 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHC-CCCCccceeEEEecCCCeeeeeeccc
Confidence 348899999999999999987666788999998863 345789999999888 99999999999999999999999997
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++.... ...++......++. .++.+||+.+++|||||
T Consensus 85 ~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 130 (261)
T cd05068 85 YGSLLEYLQGGA----GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLA 130 (261)
T ss_pred CCcHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence 69999997532 22345555555443 89999999999887766
No 149
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.53 E-value=9.5e-15 Score=154.53 Aligned_cols=113 Identities=19% Similarity=0.252 Sum_probs=90.0
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-ccH
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CSL 553 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-GsL 553 (613)
+..++.||+|+-|.||+ +...++.||||+++. .-..+|..|+++ +||||+.+.|+|.....+|||||||+ |-|
T Consensus 126 IsELeWlGSGaQGAVF~-Grl~netVAVKKV~e----lkETdIKHLRkL-kH~NII~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 126 ISELEWLGSGAQGAVFL-GRLHNETVAVKKVRE----LKETDIKHLRKL-KHPNIITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhhhhccCcccceee-eeccCceehhHHHhh----hhhhhHHHHHhc-cCcceeeEeeeecCCceeEEeeeccccccH
Confidence 34467899999999998 456678999998874 223456677777 99999999999999999999999999 999
Q ss_pred HHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 554 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+++|+..+. ....+-.+|...+. .||+|||.+.|||||||
T Consensus 200 ~~VLka~~~--itp~llv~Wsk~IA-~GM~YLH~hKIIHRDLK 239 (904)
T KOG4721|consen 200 YEVLKAGRP--ITPSLLVDWSKGIA-GGMNYLHLHKIIHRDLK 239 (904)
T ss_pred HHHHhccCc--cCHHHHHHHHHHhh-hhhHHHHHhhHhhhccC
Confidence 999996431 11222345555444 79999999999999999
No 150
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.53 E-value=9.9e-14 Score=144.54 Aligned_cols=122 Identities=17% Similarity=0.146 Sum_probs=98.5
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|++.+.||+|+||.||++. ..++..+|+|.+... ....+.+|++++.++ +||||+++++++...+..++||||
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHEC-NSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEeeCCEEEEEeec
Confidence 38889999999999999974 667889999988753 224688999999888 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhc-CCceeeccc----eecCCC
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLP-VMENTKDIE----LWKANG 602 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~-~~iiHrDlK----llh~dg 602 (613)
++ |+|.++++.. ..+++.+...++. .+|.|||+ .+++|||+| |+..++
T Consensus 81 ~~~~~L~~~l~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~ 137 (308)
T cd06615 81 MDGGSLDQVLKKA------GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG 137 (308)
T ss_pred cCCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC
Confidence 99 5999999753 2345555544444 89999997 588888887 554443
No 151
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.53 E-value=1e-13 Score=139.64 Aligned_cols=115 Identities=28% Similarity=0.354 Sum_probs=93.6
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccchH-----HHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHD-----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~~-----~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|+..+.||+|+||+||++. ..+++.+|+|++.....+ ...+|+..+.++ +||||+++++++...+..++||||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRL-RHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHH-TBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccc-cccccccccccccccccccccccc
Confidence 6788999999999999985 566779999999975433 234588888888 999999999999999999999999
Q ss_pred CCc-cHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+++ +|.+++.... .++...+..++. .+|.+||+.+++|||||
T Consensus 80 ~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dik 125 (260)
T PF00069_consen 80 CPGGSLQDYLQKNK------PLSEEEILKIAYQILEALAYLHSKGIVHRDIK 125 (260)
T ss_dssp ETTEBHHHHHHHHS------SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBS
T ss_pred cccccccccccccc------cccccccccccccccccccccccccccccccc
Confidence 995 9999998432 334444444443 89999999999887765
No 152
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.53 E-value=6.9e-14 Score=149.03 Aligned_cols=117 Identities=26% Similarity=0.211 Sum_probs=92.6
Q ss_pred cCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC----
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD---- 540 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~---- 540 (613)
+.+.|...+.||+|+||.||++. ..+|+.||||++... ....+.+|+.++..+ +||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCV-NHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhC-CCCCEeeeeeeeccCCCccc
Confidence 33569999999999999999974 677899999998752 334678999888777 9999999999987543
Q ss_pred --EEEEEecCCCccHHHHHHHhcCCCccccCCHHHH---HHHHHHHHHHHhcCCceeeccc
Q 007199 541 --FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQD---SNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 --~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~---~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
..|+||||++++|.+.++.. ++...+ ...++.||.|||+.+|+|||||
T Consensus 98 ~~~~~lv~e~~~~~l~~~~~~~--------~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlk 150 (359)
T cd07876 98 FQDVYLVMELMDANLCQVIHME--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 150 (359)
T ss_pred cceeEEEEeCCCcCHHHHHhcc--------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 57999999999888877531 233333 3344489999999999888877
No 153
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.53 E-value=1.4e-13 Score=141.68 Aligned_cols=117 Identities=21% Similarity=0.101 Sum_probs=94.3
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|+..+.||+|+||.||++ ...+++.||||.+... ..+.+.+|+.++.++ +|+||+++++.+...+..++|||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l-~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKV-NSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhC-CCCCeeeeeEEEecCCEEEEEEE
Confidence 667789999999999997 4678999999998752 123567899888777 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|++ |+|.+++.... ...+++.....+ ++.++.|||+.+++|||||
T Consensus 81 ~~~g~~L~~~l~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dik 129 (285)
T cd05630 81 LMNGGDLKFHIYHMG----EAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLK 129 (285)
T ss_pred ecCCCcHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCC
Confidence 999 69999987542 223444444443 3389999999999988887
No 154
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=2.1e-14 Score=145.84 Aligned_cols=126 Identities=21% Similarity=0.281 Sum_probs=98.8
Q ss_pred ccCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeEEEEEEe-----
Q 007199 470 RIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESD----- 538 (613)
Q Consensus 470 ~i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~-----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~----- 538 (613)
.+...|...+.||+|+||.|+.+ ...+|+.||+|++.. ...++..+|+..|+.+ +|+||+.+++.+..
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~-~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHL-RHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHh-cCCCcceEEeecccccccc
Confidence 34455666889999999999997 588899999999884 2344788999999888 89999999999876
Q ss_pred CCEEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccceecCCCcCcceee
Q 007199 539 QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 539 ~~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlKllh~dg~PsniLl 609 (613)
-+.+|+|+|+|+-+|.+.|+... .+..+.+.. ++..|++|+|+.+++|||+| |+|+|+
T Consensus 98 f~DvYiV~elMetDL~~iik~~~------~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLK-------PsNll~ 158 (359)
T KOG0660|consen 98 FNDVYLVFELMETDLHQIIKSQQ------DLTDDHAQYFLYQILRGLKYIHSANVIHRDLK-------PSNLLL 158 (359)
T ss_pred cceeEEehhHHhhHHHHHHHcCc------cccHHHHHHHHHHHHHhcchhhcccccccccc-------hhheee
Confidence 34799999999999999998542 244433333 33389999999999887765 566555
No 155
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=99.53 E-value=1.5e-13 Score=147.22 Aligned_cols=164 Identities=20% Similarity=0.303 Sum_probs=122.3
Q ss_pred CCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCC-ceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccH--
Q 007199 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGTGR-PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSA-- 122 (613)
Q Consensus 46 ~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~-~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~-- 122 (613)
..++.+|+|+.||.+||+|..||+++|+++.+. +.+.. .+... +..++..+.||.+|++++.+|.+ +|.+.+
T Consensus 109 ~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~--~~v~~--~~~v~~~s~~g~~~al~~~tG~~-~W~~~~~~ 183 (370)
T COG1520 109 GSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYAS--PPVVG--DGTVYVGTDDGHLYALNADTGTL-KWTYETPA 183 (370)
T ss_pred EeCCeEEEecccceEEEEECCCCcEEEEEecCCCeEEec--CcEEc--CcEEEEecCCCeEEEEEccCCcE-EEEEecCC
Confidence 367999999999999999999999999999888 33333 11122 23555555799999999999999 999666
Q ss_pred --HHHhhhCceeecCCcEEEEee--cceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCccccccccccccc
Q 007199 123 --EEYIRRMPYISKDGGVTLGAM--KTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLK 198 (613)
Q Consensus 123 --~~~v~~sP~~~~dg~v~~Gs~--~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (613)
...+.++|.+. +|.+|+|.. ++.++++|+.+|..+|.......+...... .. + .+....+
T Consensus 184 ~~~~~~~~~~~~~-~~~vy~~~~~~~~~~~a~~~~~G~~~w~~~~~~~~~~~~~~--~~----~------~~~~~~v--- 247 (370)
T COG1520 184 PLSLSIYGSPAIA-SGTVYVGSDGYDGILYALNAEDGTLKWSQKVSQTIGRTAIS--TT----P------AVDGGPV--- 247 (370)
T ss_pred ccccccccCceee-cceEEEecCCCcceEEEEEccCCcEeeeeeeecccCccccc--cc----c------cccCceE---
Confidence 45677788866 999999998 788999999999999996433322110000 00 0 0111111
Q ss_pred ccccEEEEEeeeeEEEEEeCCCCceEEEEEec
Q 007199 199 RIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYA 230 (613)
Q Consensus 199 ~~~~~v~igr~d~~l~a~d~~~G~~~Wn~t~~ 230 (613)
..++.+|.+..++.++|+|..+|+++|+....
T Consensus 248 ~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 248 YVDGGVYAGSYGGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred EECCcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence 13567899999999999999999999999997
No 156
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.52 E-value=6.4e-14 Score=140.97 Aligned_cols=112 Identities=21% Similarity=0.220 Sum_probs=90.4
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-cc
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CS 552 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-Gs 552 (613)
+.||+|+||.||++. ..+++.+|+|.+... ....+.+|++++.++ +||||+++++++...+..++||||++ |+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQY-SHPNIVRLIGVCTQKQPIYIVMELVQGGD 79 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence 468999999999974 568999999987653 234788999988887 99999999999999999999999999 69
Q ss_pred HHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 553 LNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 553 L~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|.++++... ..+++..+..++ ..++.|||+.+++|||||
T Consensus 80 L~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~ 121 (252)
T cd05084 80 FLTFLRTEG-----PRLKVKELIQMVENAAAGMEYLESKHCIHRDLA 121 (252)
T ss_pred HHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence 999997532 234444433333 389999999999888776
No 157
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.52 E-value=1.2e-13 Score=139.85 Aligned_cols=118 Identities=21% Similarity=0.203 Sum_probs=95.4
Q ss_pred ceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
+.|++.++||+|+||.||++...+++.||+|.+... ..+.+.+|++++.++ +|+||+++++++. .+..+++|||++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQL-QHPRLVRLYAVVT-QEPIYIITEYME 83 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhc-CCcCeeeEEEEEc-cCCcEEEEEcCC
Confidence 458899999999999999988778899999999863 345789999988887 9999999999874 567899999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++.... ...++......++ +.++.|||+.+++|||||
T Consensus 84 ~~~L~~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~ 129 (260)
T cd05067 84 NGSLVDFLKTPE----GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLR 129 (260)
T ss_pred CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHhcCCeeccccc
Confidence 69999987542 2234544444433 389999999998887777
No 158
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.52 E-value=8.9e-14 Score=141.16 Aligned_cols=116 Identities=21% Similarity=0.208 Sum_probs=95.4
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
.|++.+.||+|+||.||++. ..+++.||+|++... ..+.+.+|+.++.++ +||||+++++++...+..++||||+
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~-~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKEC-KHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhc-CCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 48889999999999999975 578899999998753 334678899888777 9999999999999999999999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+ |+|.++++... .+++..+. ..++.++.|||+.+++|||+|
T Consensus 89 ~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 133 (267)
T cd06646 89 GGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLHSKGKMHRDIK 133 (267)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence 9 69999987532 23444443 344489999999999888877
No 159
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.52 E-value=1e-13 Score=140.91 Aligned_cols=117 Identities=21% Similarity=0.145 Sum_probs=93.3
Q ss_pred eEEEeeeEeecCceEEEEEEe-eC---CcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN-YE---GRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~-~~---g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+|++.+.||+|+||.||++.. .+ +..+|+|.++.. ..+.+.+|+.++.++ +||||+++++++...+..++|
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccEEE
Confidence 478899999999999999753 22 337999998753 234788999988887 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|||++ |+|.+++.... ..++...+.+++ +.++.+||+.+++|||+|
T Consensus 84 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlk 133 (267)
T cd05066 84 TEYMENGSLDAFLRKHD-----GQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLA 133 (267)
T ss_pred EEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhc
Confidence 99999 69999997632 234444444433 389999999999888877
No 160
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.52 E-value=2.7e-14 Score=151.78 Aligned_cols=120 Identities=21% Similarity=0.147 Sum_probs=92.8
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
|+..+.||+|+||.||++. ..+++.||||.+.... .+.+.+|+++|..+ +|+||+++++++...+.+++|||||
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDV-NHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhC-CCCCcceeeeEeccCCeEEEEEecC
Confidence 6777899999999999974 5678999999987532 34688999999887 9999999999999999999999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
. |+|.+.... .......+.+.++.+|.|||+.+++||||| |+..++
T Consensus 155 ~~~~L~~~~~~-------~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~ 205 (353)
T PLN00034 155 DGGSLEGTHIA-------DEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK 205 (353)
T ss_pred CCCcccccccC-------CHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC
Confidence 9 588543211 111112234444589999999999888887 555444
No 161
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.52 E-value=1.6e-13 Score=139.18 Aligned_cols=120 Identities=18% Similarity=0.222 Sum_probs=96.3
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|++.+.||+|+||.||++. ..+++.||||.++.. ....+.+|++++.++ +||||+++++++...+..+++|
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL-NHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhC-CCcceeeeeeeEEECCeEEEEE
Confidence 48899999999999999974 668899999987641 223678899999888 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
||++ |+|.+++..... ....+++..+..++. .|+.|||+.+++|||||
T Consensus 82 e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~ 133 (267)
T cd08228 82 ELADAGDLSQMIKYFKK--QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIK 133 (267)
T ss_pred EecCCCcHHHHHHHhhh--ccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCC
Confidence 9999 699998875421 123345555544443 89999999999887777
No 162
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.52 E-value=1.5e-13 Score=141.80 Aligned_cols=118 Identities=19% Similarity=0.155 Sum_probs=94.7
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
.|+..+.||+|+||.||++. ..+|+.||+|.+... ..+.+.+|++++.++ +||||+++++++...+..|+|||
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhc-cCCCEeeEEEEEecCCeEEEEEe
Confidence 48889999999999999975 567899999988752 234688899999888 99999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
|++++|.+++.... .....+.++.. .++.||.|||+.+++|||||
T Consensus 82 ~~~~~l~~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~ 129 (294)
T PLN00009 82 YLDLDLKKHMDSSP----DFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLK 129 (294)
T ss_pred cccccHHHHHHhCC----CCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCC
Confidence 99999988886532 22234444433 33489999999998777666
No 163
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.52 E-value=1.7e-13 Score=141.32 Aligned_cols=122 Identities=24% Similarity=0.239 Sum_probs=99.4
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.+.||+|+||.||++. ..+++.||+|.+... ..+.+.+|+++|.++ +||||+++++++...+..++||
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSI-RHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCccceeeEEEcCCeEEEEE
Confidence 48889999999999999974 567899999998752 334688999999888 8999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||++ |+|.+++... ..++......+ ++.++.+||+.+++||||+ ++..++
T Consensus 81 e~~~~~~L~~~~~~~------~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~ 138 (290)
T cd05580 81 EYVPGGELFSHLRKS------GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG 138 (290)
T ss_pred ecCCCCCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC
Confidence 9998 7999999754 23444444443 3389999999999888887 555554
No 164
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.52 E-value=1.8e-13 Score=140.19 Aligned_cols=118 Identities=17% Similarity=0.121 Sum_probs=98.2
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
|+..+.||+|++|.||++. ..+|+.||||+++.. ..+.+.+|++++.++ +||||+++++++...+..+|||||+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKEL-KHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhh-cCCCEeeeeeeEeeCCcEEEEEecC
Confidence 7888999999999999975 567899999998753 234677899999887 9999999999999999999999999
Q ss_pred CccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+|+|.+++.... ....+++..+..++. .++.|||..+++|||+|
T Consensus 81 ~~~l~~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~ 127 (284)
T cd07836 81 DKDLKKYMDTHG---VRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLK 127 (284)
T ss_pred CccHHHHHHhcC---CCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCC
Confidence 999999987643 223456666555544 89999999999888887
No 165
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.52 E-value=1.2e-13 Score=140.32 Aligned_cols=117 Identities=23% Similarity=0.156 Sum_probs=94.1
Q ss_pred eEEEeeeEeecCceEEEEEEee----CCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~----~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
.|.+.+.||+|+||.||++... +...||||.++.. ....+.+|+..+.++ +||||+++++++...+..+++
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 5 YVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQF-DHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhC-CCCCcceEeEEEecCCceEEE
Confidence 4888999999999999997532 3457999998753 234688899998877 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|||++ |+|.+++.... ..++...+.+++. .++.|||+.+++|||+|
T Consensus 84 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~ 133 (266)
T cd05033 84 TEYMENGSLDKFLREND-----GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLA 133 (266)
T ss_pred EEcCCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 99999 69999998642 2445555544443 89999999999887766
No 166
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.52 E-value=6.8e-14 Score=142.43 Aligned_cols=116 Identities=22% Similarity=0.187 Sum_probs=88.4
Q ss_pred eeEeecCceEEEEEEe---eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEGN---YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~---~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||.||++.. .++..+|+|.++... ...+.+|+.++.++ +||||+++++++......++||||++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSL-QHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 3689999999999743 344679999887532 23688899988888 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
|+|.++++..+.. .........+. ..+..++.|||+.+++|||+|
T Consensus 80 g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlk 127 (269)
T cd05087 80 GDLKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLA 127 (269)
T ss_pred CcHHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHCCEeccccC
Confidence 7999999864311 11122333322 333489999999999888877
No 167
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.51 E-value=6.8e-14 Score=149.36 Aligned_cols=119 Identities=22% Similarity=0.164 Sum_probs=91.5
Q ss_pred CceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC------
Q 007199 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ------ 539 (613)
Q Consensus 472 ~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~------ 539 (613)
.+.|...+.||+|+||.||++. ..+++.||||++... ....+.+|+.++..+ +||||+++++++...
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhc-CCCCccccceeeccccccccc
Confidence 3559999999999999999974 667899999998752 234678899888777 999999999987643
Q ss_pred CEEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 540 DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 540 ~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
...|+||||++++|.+++... ........+...++.||.|||+.+|+|||||
T Consensus 102 ~~~~lv~e~~~~~l~~~~~~~-----~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlk 153 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 153 (364)
T ss_pred CeEEEEEeCCCCCHHHHHHhc-----CCHHHHHHHHHHHHHHHHHHhhCCeecCCCC
Confidence 357999999999998887532 1111122333444489999999999888877
No 168
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.51 E-value=5.3e-14 Score=149.05 Aligned_cols=88 Identities=24% Similarity=0.359 Sum_probs=73.4
Q ss_pred ceEEEeeeEeecCceEEEEEE------eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC-CE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG------NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ-DF 541 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~------~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~-~~ 541 (613)
++|.+.+.||+|+||.||+|. ..+++.||||+++.. ..+.+.+|+.+|.++.+||||+++++++... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 348899999999999999974 356789999999752 2346789999998887889999999988754 46
Q ss_pred EEEEecCCC-ccHHHHHHHh
Q 007199 542 VYLSLERCT-CSLNDLIYVL 560 (613)
Q Consensus 542 ~~LV~E~~~-GsL~~~L~~~ 560 (613)
.+++||||+ |+|.++++..
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~ 106 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSK 106 (343)
T ss_pred eEEEEeccCCCcHHHHHHhc
Confidence 899999999 7999999864
No 169
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.51 E-value=5.4e-15 Score=144.24 Aligned_cols=120 Identities=19% Similarity=0.129 Sum_probs=97.8
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCE
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~ 541 (613)
.|...++||.|..++|.+| ...+|..+|+|+|... -.+.-.+|+.+|.++..||+|+++.++|+.+.+
T Consensus 18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF 97 (411)
T KOG0599|consen 18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF 97 (411)
T ss_pred hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence 3677789999999999986 6889999999999751 123567899999999999999999999999999
Q ss_pred EEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 542 VYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 542 ~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+++|+|+|+ |.|+|+|...- ..+......+++.+.+++.|||..+|+|||+|
T Consensus 98 ~FlVFdl~prGELFDyLts~V---tlSEK~tR~iMrqlfegVeylHa~~IVHRDLK 150 (411)
T KOG0599|consen 98 VFLVFDLMPRGELFDYLTSKV---TLSEKETRRIMRQLFEGVEYLHARNIVHRDLK 150 (411)
T ss_pred hhhhhhhcccchHHHHhhhhe---eecHHHHHHHHHHHHHHHHHHHHhhhhhcccC
Confidence 999999999 99999998532 12222234455555699999999999888776
No 170
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.51 E-value=1.1e-13 Score=139.69 Aligned_cols=122 Identities=22% Similarity=0.228 Sum_probs=98.1
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-c
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-C 551 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-G 551 (613)
|.+.+.||+|+||.||++...++..+|+|.+.+. ..+.+.+|++++.++ +||||+++++++...+..++||||++ +
T Consensus 6 ~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd05059 6 LTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKL-SHPNLVQLYGVCTKQRPIFIVTEYMANG 84 (256)
T ss_pred cchhhhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhC-CCCCEEEEEEEEcCCCceEEEEecCCCC
Confidence 7788999999999999986556778999998753 345788999999887 99999999999999999999999999 5
Q ss_pred cHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 552 SLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+|.++++... ..++......+ ++.++.+||+.+++|||+| +++.++
T Consensus 85 ~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~ 137 (256)
T cd05059 85 CLLNYLRERK-----GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDN 137 (256)
T ss_pred CHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCC
Confidence 9999998642 23444444333 3389999999999888887 554444
No 171
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.51 E-value=1.6e-13 Score=152.63 Aligned_cols=121 Identities=18% Similarity=0.167 Sum_probs=94.9
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC------
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD------ 540 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~------ 540 (613)
+.|.+.+.||+|+||+||++. ..+|+.||||++... ....+.+|+..|..+ +|+||++++..+...+
T Consensus 32 ~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~-~h~~iv~~~~~~~~~~~~~~~~ 110 (496)
T PTZ00283 32 KKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC-DFFSIVKCHEDFAKKDPRNPEN 110 (496)
T ss_pred CCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC-CCCcEEEeecceecccccCccc
Confidence 459999999999999999974 678999999998753 223678899888777 9999999998776433
Q ss_pred --EEEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 541 --FVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 --~~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
.+++||||++ |+|.++|+.... ....+++..+..++. .||+|||+.+|+|||||
T Consensus 111 ~~~i~lV~Ey~~~gsL~~~l~~~~~--~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLK 170 (496)
T PTZ00283 111 VLMIALVLDYANAGDLRQEIKSRAK--TNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIK 170 (496)
T ss_pred ceEEEEEEeCCCCCcHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence 4789999999 799999976431 233455555544443 89999999999887766
No 172
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.51 E-value=5.8e-14 Score=142.54 Aligned_cols=116 Identities=22% Similarity=0.247 Sum_probs=95.3
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
.|.+.+.||+|+||.||++. ..+++.||+|.++... ...+.+|+.++..+ +||||+++++.+...+..|++|||+
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l-~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDC-KHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhC-CCCCeeeEEEEEEeCCEEEEEEecc
Confidence 47788899999999999974 5678999999987642 23577899888777 9999999999999999999999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
+ |+|.++++... .+++..+..++ +.++.|||..+++|||||
T Consensus 89 ~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 133 (267)
T cd06645 89 GGGSLQDIYHVTG------PLSESQIAYVSRETLQGLYYLHSKGKMHRDIK 133 (267)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 9 69999987532 34555554443 389999999999888877
No 173
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.51 E-value=1.3e-13 Score=145.04 Aligned_cols=116 Identities=21% Similarity=0.103 Sum_probs=89.9
Q ss_pred EeecCceEEEEEE-eeCCcEEEEEEeeccc------hHHHHHHHHHHHhcC--CCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 481 IAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASD--QHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 481 LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~--~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
||+|+||+||++. ..+++.||||++.+.. ...+..|..++.... +||||++++.++...+..|+||||++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 6999999999974 6779999999997521 123455666666554 79999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|.+++.... .+++..+..+ ++.|+.|||+.+|+||||| |+..++
T Consensus 81 g~L~~~l~~~~------~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~ 133 (330)
T cd05586 81 GELFWHLQKEG------RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG 133 (330)
T ss_pred ChHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC
Confidence 69999987532 3445554443 3389999999999988887 555544
No 174
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.51 E-value=3e-13 Score=139.28 Aligned_cols=118 Identities=16% Similarity=0.074 Sum_probs=93.9
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+.|...+.||+|+||.||++. ..+|+.||+|++.... ...+.+|++++..+ +|+||+++++++...+..|+|||
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGL-KHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhc-CCCCEeEEEEEEecCCeEEEEEe
Confidence 458999999999999999974 6778999999987532 23677899888887 99999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|+.++|.+++.... ..+...++..+ +..+|.|||..+++|||||
T Consensus 84 ~~~~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlk 130 (291)
T cd07870 84 YMHTDLAQYMIQHP-----GGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLK 130 (291)
T ss_pred cccCCHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 99988888876432 22333333333 3389999999998877776
No 175
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.51 E-value=2.3e-13 Score=137.50 Aligned_cols=119 Identities=21% Similarity=0.197 Sum_probs=97.0
Q ss_pred ceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
+.|.+.+.||+|+||.||++...+++.+|||.+... ..+.+.+|+.++.++ +|+||+++++++......+++|||++
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~ 84 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKL-RHDKLVQLYAVCSEEEPIYIVTEYMS 84 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhC-CCCCEeeeeeeeecCCceEEEEeccC
Confidence 458999999999999999987667788999999863 345789999999887 99999999999999899999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++.... ...++......++ +.++.|||+.+++|+|||
T Consensus 85 ~~~L~~~i~~~~----~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~ 130 (261)
T cd05034 85 KGSLLDFLKSGE----GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLA 130 (261)
T ss_pred CCCHHHHHhccc----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcc
Confidence 69999997642 2234444444433 389999999998877666
No 176
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.51 E-value=1.7e-13 Score=138.93 Aligned_cols=117 Identities=21% Similarity=0.180 Sum_probs=95.6
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~--~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
|.+.+.||+|+||.||++. ..+++.||+|++.... .+++.+|++.+.++ +||||+++++++...+..+++|||++
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (263)
T cd05052 8 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTREPPFYIITEFMTY 86 (263)
T ss_pred eEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhC-CCCChhheEEEEcCCCCcEEEEEeCCC
Confidence 7888999999999999974 5678899999988643 34788999999887 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHH---HHHHHHHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQD---SNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~---~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++.... ...++.... ...++.++.|||+.+++|||||
T Consensus 87 ~~L~~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlk 131 (263)
T cd05052 87 GNLLDYLRECN----RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLA 131 (263)
T ss_pred CcHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccC
Confidence 69999997642 223444333 3344489999999999887776
No 177
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.51 E-value=1.9e-13 Score=140.14 Aligned_cols=123 Identities=24% Similarity=0.218 Sum_probs=95.3
Q ss_pred eEEEeeeEeecCceEEEEEE-----eeCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVY 543 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-----~~~g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~~ 543 (613)
.|++.+.||+|+||.||++. ..+++.||+|++.... .+.+.+|++++.++ +||||+++++++... ..++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL-QHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCCeeEEEEEEccCCCCceE
Confidence 48889999999999999974 3467899999987643 34788999999887 999999999987643 4789
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+||||++ |+|.+++...+ ..++......+ ++.++.|||..+++||||| ++..++
T Consensus 84 lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~ 145 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR-----ERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESEN 145 (284)
T ss_pred EEEEecCCCCHHHHHHhcC-----cCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCC
Confidence 9999999 69999997532 22333333333 3389999999999888877 555444
No 178
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=99.50 E-value=2e-13 Score=156.31 Aligned_cols=169 Identities=12% Similarity=0.056 Sum_probs=112.9
Q ss_pred CCCCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCcee-------------eccccccCCCCCeEEEecC---------C
Q 007199 44 LPPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIY-------------SSYQASFNSNASEFYLDVD---------E 101 (613)
Q Consensus 44 ~~~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~-------------s~~~~~~~~~~~~~~i~~~---------~ 101 (613)
+++.++.||++|.||+|||||+.||+++|+|..++.+- ....++.-.+ +.+|++++ -
T Consensus 256 p~~~~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~-g~VIvG~~v~d~~~~~~~ 334 (764)
T TIGR03074 256 PADCARRIILPTSDARLIALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAG-TTVVIGGRVADNYSTDEP 334 (764)
T ss_pred ccccCCEEEEecCCCeEEEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEEC-CEEEEEecccccccccCC
Confidence 44678899999999999999999999999998765441 1111121111 23455432 2
Q ss_pred CCeEEEEecCCCceeeecccHHHHhhhCc------------------eee-cCCcEEEEe------------------ec
Q 007199 102 DWELYFHSKRFGKMKKLSSSAEEYIRRMP------------------YIS-KDGGVTLGA------------------MK 144 (613)
Q Consensus 102 DG~lY~~~~~~G~l~~~~~~~~~~v~~sP------------------~~~-~dg~v~~Gs------------------~~ 144 (613)
+|.|+++|.+||++ .|.+.+.......| .+. +.|.||+|. ..
T Consensus 335 ~G~I~A~Da~TGkl-~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~ 413 (764)
T TIGR03074 335 SGVIRAFDVNTGAL-VWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYS 413 (764)
T ss_pred CcEEEEEECCCCcE-eeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCccccc
Confidence 79999999999999 99998653222211 111 235677743 35
Q ss_pred ceEEEEECCCCcEEEEEecCCC------CCCCCCcCCCCCccccCCCcccccccccccccccccEEEEEeeeeEEEEEeC
Q 007199 145 TSVFLVDVKSGRVVDNYVLDFS------ASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQ 218 (613)
Q Consensus 145 ~~~~~vD~~tG~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~igr~d~~l~a~d~ 218 (613)
++++|||++||+++|.|.+-.. ..++|. +++-...+. ..-..||.+..++.++++|+
T Consensus 414 ~slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~----------------L~d~~~~~G-~~~~~v~~~~K~G~~~vlDr 476 (764)
T TIGR03074 414 SSLVALDATTGKERWVFQTVHHDLWDMDVPAQPS----------------LVDLPDADG-TTVPALVAPTKQGQIYVLDR 476 (764)
T ss_pred ceEEEEeCCCCceEEEecccCCccccccccCCce----------------EEeeecCCC-cEeeEEEEECCCCEEEEEEC
Confidence 7899999999999999987321 111111 111100000 01238999999999999999
Q ss_pred CCCceEEEEEece
Q 007199 219 DSGEVLWNVAYAD 231 (613)
Q Consensus 219 ~~G~~~Wn~t~~~ 231 (613)
+||+++|.+.+.-
T Consensus 477 ~tG~~l~~~~e~~ 489 (764)
T TIGR03074 477 RTGEPIVPVEEVP 489 (764)
T ss_pred CCCCEEeeceeec
Confidence 9999999987764
No 179
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.50 E-value=2.4e-13 Score=139.61 Aligned_cols=124 Identities=23% Similarity=0.175 Sum_probs=94.9
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhc--CCCCcceeEEEEEEe-----CCE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIAS--DQHPNIVRWYGVESD-----QDF 541 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l--~~HpnIV~l~g~~~~-----~~~ 541 (613)
|...+.||+|+||+||++. ..+++.||+|.++.. ....+.+|++++..+ .+||||+++++++.. ...
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~ 81 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETK 81 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCce
Confidence 7888999999999999984 678999999998752 123566777777654 379999999998865 246
Q ss_pred EEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 542 ~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
.+++|||++++|.+++.... ...+++..+..++. .|+.|||+.+++||||| ++..++
T Consensus 82 ~~lv~e~~~~~l~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~ 145 (288)
T cd07863 82 VTLVFEHVDQDLRTYLDKVP----PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG 145 (288)
T ss_pred EEEEEcccccCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 89999999999999987542 23355666555444 89999999999888877 444444
No 180
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.50 E-value=1.9e-13 Score=158.75 Aligned_cols=134 Identities=15% Similarity=0.121 Sum_probs=98.4
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYL 544 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~~L 544 (613)
..|.+.+.||+|+||+||++ ...++..||+|.+... ....+..|+.+|.++ +|||||+++++|... +.+||
T Consensus 13 ~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L-~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 13 NEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMREL-KHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHc-CCCCcCeEEEEEEecCCCEEEE
Confidence 45999999999999999997 4677889999998742 234788999999888 999999999988654 57999
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccceecCCCcCcceee
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlKllh~dg~PsniLl 609 (613)
|||||+ |+|.++|..... ....+++..+..++. .||.|||..+.-+.+-.++|+|++|+||||
T Consensus 92 VMEY~~gGSL~~lL~k~~~--~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL 158 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCYK--MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL 158 (1021)
T ss_pred EEeCCCCCcHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEe
Confidence 999999 699999986421 223456655555443 899999985421111123445555555555
No 181
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.50 E-value=1e-13 Score=147.33 Aligned_cols=123 Identities=24% Similarity=0.207 Sum_probs=94.7
Q ss_pred cCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC----
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD---- 540 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~---- 540 (613)
+.+.|...+.||+|+||.||++. ..+++.||||++... ....+.+|+.++..+ +||||+++++++....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV-NHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHh-CCCchhceeeeeeccccccc
Confidence 33569999999999999999974 567899999998752 234677899888777 9999999999886543
Q ss_pred --EEEEEecCCCccHHHHHHHhcCCCccccCCHHH---HHHHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 541 --FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQ---DSNLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 541 --~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~---~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
..|+||||++++|.+.+... ++... +...++.||.|||+.+++||||| |+..++
T Consensus 94 ~~~~~lv~e~~~~~l~~~~~~~--------l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~ 156 (355)
T cd07874 94 FQDVYLVMELMDANLCQVIQME--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156 (355)
T ss_pred cceeEEEhhhhcccHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC
Confidence 57999999999888877532 23333 33344489999999999888877 554444
No 182
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.50 E-value=3.6e-13 Score=135.71 Aligned_cols=117 Identities=19% Similarity=0.180 Sum_probs=95.2
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
|++.+.||+|+||.||++. ..+++.+|+|.++.. ..+.+.+|+.++..+ +|+||+++++++...+..|++|||+
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKM-KHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhC-CCCCcceEEEEEEECCEEEEEEeeC
Confidence 7788999999999999974 668899999988642 334778899888777 9999999999999999999999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+ |+|.+++.... ...+++..+.+++. .++.+||..+++|+|||
T Consensus 81 ~~~~l~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~ 127 (255)
T cd08219 81 DGGDLMQKIKLQR----GKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIK 127 (255)
T ss_pred CCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 9 69999987532 22345555544443 89999999999887766
No 183
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.50 E-value=5.7e-14 Score=148.58 Aligned_cols=118 Identities=19% Similarity=0.187 Sum_probs=93.5
Q ss_pred cCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC-----
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ----- 539 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~----- 539 (613)
+.+.|...+.||+|+||.||++. ..+++.||||++... ..+.+.+|+++|.++ +||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHM-KHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhc-CCCchhhhhhhhcccccccc
Confidence 34568999999999999999974 678889999998753 234677899999888 999999999987643
Q ss_pred -CEEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 540 -DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 540 -~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
...|+++|++.++|.++++.. .+++..+..++ +.||.|||+.+|+|||||
T Consensus 92 ~~~~~~~~~~~~~~l~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdik 145 (343)
T cd07878 92 FNEVYLVTNLMGADLNNIVKCQ-------KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLK 145 (343)
T ss_pred cCcEEEEeecCCCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence 357999999988999888632 24444444443 389999999999888877
No 184
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.50 E-value=8.1e-14 Score=160.20 Aligned_cols=123 Identities=24% Similarity=0.157 Sum_probs=97.2
Q ss_pred ceEEEeeeEeecCceEEEEEEe--eCCc----EEEEEEeec----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN--YEGR----SVAVKRLVK----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~--~~g~----~VAVK~l~~----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+..++...||+|+||.||.|.. ..|. .||||.+++ +...+|.+|..+|.++ +|||||+++|.|.+....
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f-~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKF-DHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCcceeeEEEeecCCCCc
Confidence 4478899999999999999742 2232 499999987 3445899999888777 999999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHhcCC-CccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGS-FEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~-~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+|++|||+ |||..||+..+.. .....+.......+.+ .|++||++++.|||||-
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLA 829 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLA 829 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchh
Confidence 99999999 7999999986421 1233344433333333 89999999999999886
No 185
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.50 E-value=1.6e-13 Score=139.51 Aligned_cols=121 Identities=23% Similarity=0.220 Sum_probs=90.5
Q ss_pred eEeecCceEEEEEEeeC---CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-c
Q 007199 480 EIAKGSNGTVVLEGNYE---GRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-C 551 (613)
Q Consensus 480 ~LG~G~fG~Vyk~~~~~---g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-G 551 (613)
+||+|+||+||++.... ...+|+|.+.... ...+.+|++.+..+ +||||+++++++...+..++||||++ |
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~h~nii~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL-NHPNVLQCLGQCIESIPYLLVLEFCPLG 80 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC-CCCCcceEEEEECCCCceEEEEEeCCCC
Confidence 68999999999975433 3468899876432 23678899888776 99999999999999999999999999 6
Q ss_pred cHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 552 SLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+|.+++...+.. ...........+ .++.|+.|||+.+++||||| |++.++
T Consensus 81 ~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~ 137 (269)
T cd05042 81 DLKNYLRSNRGM-VAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADL 137 (269)
T ss_pred cHHHHHHhcccc-ccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCC
Confidence 999999875321 111223333333 33489999999999888887 555544
No 186
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.50 E-value=2.3e-13 Score=139.47 Aligned_cols=111 Identities=22% Similarity=0.181 Sum_probs=87.5
Q ss_pred EeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-cc
Q 007199 481 IAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CS 552 (613)
Q Consensus 481 LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-Gs 552 (613)
||+|+||.||++. ..+|+.+|+|++... ....+..|++++.++ +||||+++++++....+.++||||++ |+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l-~hp~i~~~~~~~~~~~~~~lv~e~~~g~~ 79 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKV-NSPFIVNLAYAFESKTHLCLVMSLMNGGD 79 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhc-CCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence 6999999999974 677999999998742 123456799889888 99999999999999999999999999 69
Q ss_pred HHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 553 LNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 553 L~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
|.+++.... ...+....+.. .++.++.|||+.+++|||||
T Consensus 80 L~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dik 122 (277)
T cd05607 80 LKYHIYNVG----ERGLEMERVIHYSAQITCGILHLHSMDIVYRDMK 122 (277)
T ss_pred HHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCC
Confidence 998886532 22234444333 34489999999999887776
No 187
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.50 E-value=2.2e-13 Score=142.07 Aligned_cols=118 Identities=19% Similarity=0.174 Sum_probs=89.5
Q ss_pred eeeEeecCceEEEEEEe---eCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCcceeEEEEEEe--CCEEEEEecCCCc
Q 007199 478 NKEIAKGSNGTVVLEGN---YEGRSVAVKRLVKTH-HDVALKEIQNLIASDQHPNIVRWYGVESD--QDFVYLSLERCTC 551 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~~~---~~g~~VAVK~l~~~~-~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~--~~~~~LV~E~~~G 551 (613)
...||+|+||+||++.. .++..||+|.+.... ...+.+|+++|.++ +||||+++++++.. ....++||||+++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLREL-KHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhC-CCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 46899999999999853 355789999998643 34688999999887 99999999999864 4578999999999
Q ss_pred cHHHHHHHhcCCC---ccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 552 SLNDLIYVLSGSF---EEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 552 sL~~~L~~~~~~~---~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
+|.+++....... ....+++..+..+ ++.||.|||+.+++|||||
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlk 135 (317)
T cd07867 85 DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLK 135 (317)
T ss_pred cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCC
Confidence 9999887532110 1123444444333 3489999999999887777
No 188
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.50 E-value=1.5e-13 Score=146.39 Aligned_cols=114 Identities=18% Similarity=0.109 Sum_probs=92.7
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCCcc
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCS 552 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~Gs 552 (613)
.|.+.+.||+|+||.||++. ..+++.||+|..... ....|+.++.++ +||||+++++++...+..++||||+.|+
T Consensus 67 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~---~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 142 (357)
T PHA03209 67 GYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG---TTLIEAMLLQNV-NHPSVIRMKDTLVSGAITCMVLPHYSSD 142 (357)
T ss_pred CcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc---ccHHHHHHHHhC-CCCCCcChhheEEeCCeeEEEEEccCCc
Confidence 48999999999999999974 556789999976542 345688888777 9999999999999999999999999999
Q ss_pred HHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 553 LNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 553 L~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|.+++.... ..+++..+.+++ +.||.|||..+|+|||||
T Consensus 143 l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlk 184 (357)
T PHA03209 143 LYTYLTKRS-----RPLPIDQALIIEKQILEGLRYLHAQRIIHRDVK 184 (357)
T ss_pred HHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 999987532 234555444443 389999999999887776
No 189
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.50 E-value=2.1e-13 Score=138.66 Aligned_cols=117 Identities=21% Similarity=0.176 Sum_probs=92.0
Q ss_pred EEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 476 VFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 476 ~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
.....||+|+||.||++. ..+++.||+|.+.... .+.+.+|++++.++ +|+||+++++++...+..++++||++
T Consensus 11 ~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~ 89 (268)
T cd06624 11 GERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYL-KHRNIVQYLGSDSENGFFKIFMEQVPG 89 (268)
T ss_pred CceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhc-CCCCeeeeeeeeccCCEEEEEEecCCC
Confidence 344589999999999985 5678899999987643 34788999988777 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++|.++++.... ........+. ..+..++.|||+.+++|||+|
T Consensus 90 ~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~ 135 (268)
T cd06624 90 GSLSALLRSKWG---PLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIK 135 (268)
T ss_pred CCHHHHHHHhcc---cCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCC
Confidence 699999986421 1111333333 334489999999999888877
No 190
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.49 E-value=1.1e-13 Score=143.16 Aligned_cols=122 Identities=21% Similarity=0.168 Sum_probs=92.7
Q ss_pred eEEEeeeEeecCceEEEEEEee-------------CC--cEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNY-------------EG--RSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYG 534 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~-------------~g--~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g 534 (613)
.|.+.+.||+|+||.||++... ++ ..||+|.++.. ..+.+.+|+++|.++ +||||+++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~ 84 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRL-KNPNIIRLLG 84 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhC-CCCCcCeEEE
Confidence 4888999999999999986421 12 35899998753 234688999999888 9999999999
Q ss_pred EEEeCCEEEEEecCCC-ccHHHHHHHhcCCC------ccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 535 VESDQDFVYLSLERCT-CSLNDLIYVLSGSF------EEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 535 ~~~~~~~~~LV~E~~~-GsL~~~L~~~~~~~------~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++...+..++|||||+ |+|.+++....... ....+...+..+++. .++.|||+.+++|||||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlk 156 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLA 156 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccC
Confidence 9999999999999999 69999997532100 011234444444433 89999999998887777
No 191
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.49 E-value=2.2e-13 Score=138.29 Aligned_cols=118 Identities=19% Similarity=0.179 Sum_probs=93.3
Q ss_pred ceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
..|.+.+.||+|+||.||++...+...||+|+++.. ..+.+.+|++++.++ +||||+++++++. .+..++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAVVS-EEPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhC-CCCCcceEEEEEC-CCCcEEEEEcCC
Confidence 348999999999999999986555567999999863 345789999999887 9999999999875 456899999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.++++... ...++......++. .+|.++|+.+++|||||
T Consensus 84 ~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~ 129 (262)
T cd05071 84 KGSLLDFLKGEM----GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLR 129 (262)
T ss_pred CCcHHHHHhhcc----ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccC
Confidence 69999998532 22344444444443 89999999999887765
No 192
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.49 E-value=1.6e-13 Score=148.59 Aligned_cols=88 Identities=25% Similarity=0.310 Sum_probs=74.3
Q ss_pred ceEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+.|.+.+.||+|+||.||++.. ..++.||||+++... .+.+.+|+++|.++..||||++++++|...+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 4488889999999999999742 344689999998532 236889999998884499999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHh
Q 007199 543 YLSLERCT-CSLNDLIYVL 560 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~ 560 (613)
++|||||+ |+|.++|+..
T Consensus 117 ~iv~E~~~~g~L~~~l~~~ 135 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRN 135 (401)
T ss_pred EEEEeccCCCcHHHHHHhc
Confidence 99999999 7999999865
No 193
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.49 E-value=4.2e-13 Score=135.87 Aligned_cols=120 Identities=21% Similarity=0.240 Sum_probs=97.6
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec------cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK------THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~------~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|++.+.||+|+||.||++. ..+|+.||+|.++. ...+.+.+|++++.++ +|+||+++++++...+..+++|
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL-DHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhC-CCCCeeeeeeeeecCCeEEEEE
Confidence 48899999999999999985 45899999998864 1245788999999888 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
||++ |+|.+++..... ....++...+.+++. .++.+||+.+++|||||
T Consensus 82 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~ 133 (267)
T cd08224 82 ELADAGDLSRMIKHFKK--QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIK 133 (267)
T ss_pred ecCCCCCHHHHHHHhcc--cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcC
Confidence 9999 699999976421 223345555554443 89999999999888776
No 194
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.49 E-value=4e-13 Score=135.41 Aligned_cols=118 Identities=25% Similarity=0.203 Sum_probs=96.7
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+|+..++||+|+||.||.+ ...+++.+++|.+... ..+.+.+|++++.++ +|+||+++++++...+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLL-QHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhC-CCCCeeEEEeEEecCCeEEEEEE
Confidence 3788999999999999986 4678899999987752 234788999999887 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
||+ |+|.+++.... ...++...+..++. .++.|||+.+++|+|+|
T Consensus 80 ~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~ 128 (256)
T cd08221 80 YANGGTLYDKIVRQK----GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIK 128 (256)
T ss_pred ecCCCcHHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 999 69999998642 23345555554443 89999999999888776
No 195
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.49 E-value=4.1e-13 Score=137.75 Aligned_cols=124 Identities=24% Similarity=0.259 Sum_probs=95.9
Q ss_pred cCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEE-----eCCEE
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVES-----DQDFV 542 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~-----~~~~~ 542 (613)
..+.|++.+.||+|+||.||++ ...+++.+|+|.+... ..+.+.+|+.++.++.+||||+++++++. ..+..
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~ 95 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQL 95 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeE
Confidence 3456899999999999999997 4567889999988752 23568889988888757999999999885 34578
Q ss_pred EEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
++||||++ |+|.++++.... ....+++..+..++ ..++.|||+.+++|||+|
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 151 (286)
T cd06638 96 WLVLELCNGGSVTDLVKGFLK--RGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVK 151 (286)
T ss_pred EEEEeecCCCCHHHHHHHhhc--cCccccHHHHHHHHHHHHHHHHHHHhCCccccCCC
Confidence 99999999 699998875321 22344544444443 389999999999888877
No 196
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.49 E-value=1.9e-13 Score=140.43 Aligned_cols=117 Identities=23% Similarity=0.194 Sum_probs=93.5
Q ss_pred eEEEeeeEeecCceEEEEEE-----eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFV 542 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-----~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~ 542 (613)
.|+..+.||+|+||.||++. ..++..||+|.++.. ..+.+.+|++++.++ +||||+++++++... ...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL-YHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhC-CCCCeeeeeeEEecCCCCce
Confidence 47888999999999999874 456788999998753 234788999999887 999999999998875 578
Q ss_pred EEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++||||++ |+|.+++.... ..++......++. .++.|||+.+++|||||
T Consensus 84 ~lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlk 136 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRNK-----NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLA 136 (284)
T ss_pred EEEEEccCCCCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 99999999 69999997532 2344444444433 89999999999888777
No 197
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.49 E-value=2.3e-13 Score=136.63 Aligned_cols=112 Identities=21% Similarity=0.164 Sum_probs=90.7
Q ss_pred eeEeecCceEEEEEEeeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-ccH
Q 007199 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CSL 553 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-GsL 553 (613)
++||+|+||.||++...+++.+|+|.+.... ...+.+|++++.++ +||||+++++++...+..++||||++ |+|
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQY-DHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 3689999999999877788899999987532 23688999998887 99999999999999999999999999 699
Q ss_pred HHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 554 NDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 554 ~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
.+++.... ..+.......++. .++.++|..+++|||+|
T Consensus 80 ~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~ 120 (250)
T cd05085 80 LSFLRKKK-----DELKTKQLVKFALDAAAGMAYLESKNCIHRDLA 120 (250)
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecccC
Confidence 99987532 2334444444433 79999999998887776
No 198
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.49 E-value=6.8e-15 Score=166.54 Aligned_cols=124 Identities=19% Similarity=0.164 Sum_probs=105.2
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec------cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK------THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~------~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|.+.++||+|+||.|... ++.+++.+|+|++.+ .....|..|-.+|... +.+.|++++-.|.+.+++|+|
T Consensus 75 ~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~-ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 75 EDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG-NSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred HhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC-CcHHHHHHHHHhcCccceEEE
Confidence 45899999999999999996 578899999999886 2334677777777555 889999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
||||+ |||..+|... ..++++|+..+.. .|+.-||+.+.|||||| |++.+||
T Consensus 154 MdY~pGGDlltLlSk~------~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GH 213 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSKF------DRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGH 213 (1317)
T ss_pred EecccCchHHHHHhhc------CCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCc
Confidence 99999 6999999853 2789999998887 89999999999998887 6666654
No 199
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.49 E-value=9e-14 Score=140.54 Aligned_cols=118 Identities=19% Similarity=0.127 Sum_probs=97.3
Q ss_pred eEEEeeeEeecCceEEEEEEeeCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
.|.+.+.||+|+||.||++...+++.+|+|.+.... .+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRL-RHKHLISLFAVCSVGEPVYIITELME 85 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcC-CCcchhheeeeEecCCCeEEEEeecc
Confidence 378889999999999999876668999999998643 45788999998777 99999999999999999999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.++++... ...+......+++. .++.|||..+++|||+|
T Consensus 86 ~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~ 131 (261)
T cd05148 86 KGSLLAFLRSPE----GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLA 131 (261)
T ss_pred cCCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccC
Confidence 69999998642 22344444444443 89999999998887776
No 200
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.49 E-value=3e-13 Score=136.45 Aligned_cols=117 Identities=26% Similarity=0.277 Sum_probs=96.3
Q ss_pred eEEEeeeEeecCceEEEEEEeeCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~--~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
.|++.+.||+|+||.||++. ..|+.||+|.++... .+.+.+|+.++.++ +|+||+++++++...+..++||||++
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~-~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~ 84 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGD-YRGQKVAVKCLKDDSTAAQAFLAEASVMTTL-RHPNLVQLLGVVLQGNPLYIVTEYMAK 84 (256)
T ss_pred hccceeeeecCCCceEEEEE-ecCcEEEEEEeccchhHHHHHHHHHHHHHhc-CCcceeeeEEEEcCCCCeEEEEEecCC
Confidence 47889999999999999964 458999999998743 45788999999888 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.++++... ...+.+.....++. .++.|||..+++|||||
T Consensus 85 ~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~ 129 (256)
T cd05039 85 GSLVDYLRSRG----RAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLA 129 (256)
T ss_pred CcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcc
Confidence 69999998642 22345555544444 89999999999887776
No 201
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.49 E-value=3e-13 Score=136.77 Aligned_cols=116 Identities=25% Similarity=0.208 Sum_probs=94.8
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT--------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~--------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
.|...+.||+|+||.||++. ..+++.+|+|.+... ..+.+.+|++++.++ +||||+++++++...+..++
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNL-QHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEccCCeEEE
Confidence 47889999999999999974 567899999988742 223678899988887 99999999999999999999
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
+|||++ ++|.+++.... .++..+..+ .++.++.+||..+++|||||
T Consensus 82 v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~ 131 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLHSNMIVHRDIK 131 (263)
T ss_pred EEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 999999 59999997542 234444443 34489999999999888877
No 202
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.49 E-value=5.9e-14 Score=142.05 Aligned_cols=118 Identities=15% Similarity=0.050 Sum_probs=90.9
Q ss_pred eeEeecCceEEEEEEe-eC-------CcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 479 KEIAKGSNGTVVLEGN-YE-------GRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~-~~-------g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+.||+|+||.||++.. .. ...+|+|.+.... .+.+..|+.++..+ +||||+++++++...+..++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~-~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQL-SHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhC-CCCChhheeeEEEeCCCcEEEEe
Confidence 3689999999999742 22 3358889887532 34678888888776 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||+ |+|.++++..+ ..++..+...++. .++.|||+.+++||||| ++..++
T Consensus 80 ~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~ 137 (258)
T cd05078 80 YVKFGSLDTYLKKNK-----NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREE 137 (258)
T ss_pred cCCCCcHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEeccc
Confidence 999 69999998642 2445555544443 89999999999888887 554444
No 203
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.49 E-value=2.9e-13 Score=137.64 Aligned_cols=125 Identities=23% Similarity=0.250 Sum_probs=98.9
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeC------CEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQ------DFVYL 544 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~------~~~~L 544 (613)
.|...+.||+|+||.||++. ..+++.||+|++... ....+.+|+.++.++.+||||+++++++... ...|+
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 86 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 86 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEE
Confidence 47778899999999999974 567889999998753 3457889998888876899999999998763 46899
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+|||++ |+|.+++.... ...+++.++..++ +.++.|||..+++|||+| +++.++
T Consensus 87 v~e~~~~~~L~~~l~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~ 148 (272)
T cd06637 87 VMEFCGAGSVTDLIKNTK----GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENA 148 (272)
T ss_pred EEEcCCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCC
Confidence 999999 69999998642 2345555555544 389999999999888887 555544
No 204
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.49 E-value=5.1e-13 Score=138.94 Aligned_cols=126 Identities=21% Similarity=0.202 Sum_probs=99.5
Q ss_pred EEEeeeEeecCceEEEEEE-ee--CCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NY--EGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~--~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~~ 543 (613)
|.+.+.||+|+||.||++. .. +++.||+|.+... ..+.+.+|++++.++ +||||+++++++... +..+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL-KHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhc-CCCCccceEEEEeCCCCceEE
Confidence 6788899999999999985 44 6899999999862 234678899888887 999999999999988 7899
Q ss_pred EEecCCCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 544 LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+||||++++|.+++...... ....+++..+.+++ +.++.|||+.+++||||| ++..++
T Consensus 81 lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~ 145 (316)
T cd07842 81 LLFDYAEHDLWQIIKFHRQA-KRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEG 145 (316)
T ss_pred EEEeCCCcCHHHHHHhhccC-CCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCC
Confidence 99999999888888754321 11245555554444 389999999999998888 665544
No 205
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.48 E-value=9.6e-15 Score=151.18 Aligned_cols=119 Identities=22% Similarity=0.161 Sum_probs=101.4
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|...++||+|+||.||+| ...+++.||+|.+..+ ..++.+.|+.+|..+ +++||.++|+.|.....++++|||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~-~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQC-DSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhc-CcchHHhhhhheeecccHHHHHHH
Confidence 3677799999999999998 5788999999999863 344788999999888 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
|. |++.+.|+... ........++.+.+..|+.|||..+.+|||||
T Consensus 93 ~~gGsv~~lL~~~~---~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIK 138 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGN---ILDEFEIAVILREVLKGLDYLHSEKKIHRDIK 138 (467)
T ss_pred hcCcchhhhhccCC---CCccceeeeehHHHHHHhhhhhhcceeccccc
Confidence 99 69999998643 22333445677777799999999999999988
No 206
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.48 E-value=2.7e-13 Score=140.89 Aligned_cols=120 Identities=21% Similarity=0.183 Sum_probs=95.3
Q ss_pred ceEEEeeeEeecCceEEEEEE------eeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG------NYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~------~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+.|.+.+.||+|+||.||++. ..++..||||+++... .+.+.+|++++.++.+||||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 458999999999999999974 2345579999987532 346889999998876899999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+++|||++ |+|.++++... ...+++.....+.. .++.|||+.+++|+|||
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlk 168 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKR----ESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLA 168 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhc
Confidence 99999999 79999997532 22245555444433 89999999999877666
No 207
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.48 E-value=2.5e-13 Score=138.50 Aligned_cols=122 Identities=20% Similarity=0.159 Sum_probs=95.5
Q ss_pred eEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
.|...+.||+|+||.||++.. .+...+|+|.+.... .+.+.+|++++.++ +|+||+++++++...+..+
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKL-SHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhc-CCcceeeeEEEECCCCcce
Confidence 478889999999999999752 234679999887532 35789999999888 9999999999999999999
Q ss_pred EEecCCC-ccHHHHHHHhcCCC---ccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSF---EEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~---~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+||||++ |+|.++++...... ....++......++. .++.|||+.+++|||||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlk 144 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLA 144 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCc
Confidence 9999999 79999998643110 011345555554443 89999999999888777
No 208
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.48 E-value=3.4e-13 Score=137.12 Aligned_cols=116 Identities=22% Similarity=0.161 Sum_probs=93.2
Q ss_pred EEEeeeEeecCceEEEEEE-eeCC---cEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEG---RSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g---~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
|.+.+.||+|+||.||++. ..++ ..||||.+... ....+.+|++++.++ +||||+++++++...+..++||
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQF-DHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCcCcceEEEEECCCCceEEEE
Confidence 7889999999999999975 3334 36999998753 234788999988877 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
||++ |+|.++++... ..+.......++ +.++.+||+.+++|||||
T Consensus 85 e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~ 133 (269)
T cd05065 85 EFMENGALDSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLA 133 (269)
T ss_pred ecCCCCcHHHHHhhCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence 9999 69999997632 234444444433 389999999999888777
No 209
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.48 E-value=2.8e-13 Score=140.79 Aligned_cols=123 Identities=20% Similarity=0.238 Sum_probs=95.3
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCc--EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGR--SVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~--~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|++.+.||+|+||.||++. ..++. .+|+|.++.. ..+.+.+|++++.++.+||||+++++++...+..|+||
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 87 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAI 87 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEE
Confidence 48889999999999999985 44554 4688877642 23468889999988878999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCC----------ccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSF----------EEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~----------~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
||++ |+|.++++...... ....+++..+..++. .|+.|||+.+++|||||
T Consensus 88 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlk 151 (303)
T cd05088 88 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLA 151 (303)
T ss_pred EeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence 9999 69999998643110 112345555555444 89999999999887776
No 210
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.48 E-value=3.5e-14 Score=151.33 Aligned_cols=120 Identities=21% Similarity=0.171 Sum_probs=99.2
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+....+||-|.||.||.+. +.....||||.++.. ..++|++|..+|+.+ +|||+|+|+|+|..+..+|||+|||.
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKei-kHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI-KHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhh-cCccHHHHhhhhccCCCeEEEEecccC
Confidence 6778899999999999964 566678999999974 456999999999887 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+||+.+.+. .-..+-+-+++-++..+|.||..+++|||||-
T Consensus 348 GNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLEkknFIHRDLA 392 (1157)
T KOG4278|consen 348 GNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLEKKNFIHRDLA 392 (1157)
T ss_pred ccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 9999999987421 22222233444444489999999999999997
No 211
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.48 E-value=2.6e-13 Score=137.27 Aligned_cols=117 Identities=20% Similarity=0.174 Sum_probs=94.3
Q ss_pred eEEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
.|++.+.||+|+||.||++...++..+|+|.+... ..+.+.+|+.++.++ +|+||+++++++. .+..+++|||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~~~~~~-~~~~~lv~e~~~~ 84 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKL-RHDKLVQLYAVVS-EEPIYIVTEYMSK 84 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhc-CCCceEEEEeEEC-CCCcEEEEEecCC
Confidence 47888999999999999987777888999998853 345789999999887 9999999999875 456899999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.++++... ...+++....+++. .++.|||+.+++|||+|
T Consensus 85 ~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~ 129 (260)
T cd05070 85 GSLLDFLKDGE----GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLR 129 (260)
T ss_pred CcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCc
Confidence 69999997632 22345544444443 89999999999887776
No 212
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.48 E-value=3.3e-13 Score=139.42 Aligned_cols=116 Identities=22% Similarity=0.197 Sum_probs=94.3
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc--------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH--------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~--------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
|...+.||+|+||.||++. ..+++.||||+++... ...+..|++++.++ +|+||+++++++...+..++|
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL-KHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhc-CCCCChhhhheeecCCEEEEE
Confidence 6778899999999999985 5678999999998632 22567899888777 999999999999999999999
Q ss_pred ecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|||+.|+|.++++... ..+++..+..++. .+|.|||..+++|+|||
T Consensus 81 ~e~~~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~ 129 (298)
T cd07841 81 FEFMETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLK 129 (298)
T ss_pred EcccCCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCC
Confidence 9999779999997531 2345544444433 89999999999887777
No 213
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.48 E-value=4.1e-13 Score=135.08 Aligned_cols=117 Identities=20% Similarity=0.182 Sum_probs=95.2
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~-----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|.+.+.||+|+||.||++. ..+++.||+|.+.. ...+.+.+|++++.++ +||||+++++++...+..++||||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 2 FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL-DSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred ceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhc-CCCCeehheeeeccCCEEEEEEEe
Confidence 6788999999999999974 56789999999874 2344788999988887 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
++ ++|.++++... ...++...+..++ +.++.|||..+++|+|+|
T Consensus 81 ~~~~~L~~~l~~~~----~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~ 128 (256)
T cd08529 81 AENGDLHKLLKMQR----GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIK 128 (256)
T ss_pred CCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 99 59999998642 2334444444333 389999999998887776
No 214
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.48 E-value=2.4e-13 Score=139.28 Aligned_cols=123 Identities=21% Similarity=0.203 Sum_probs=100.5
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|+..+.||+|+||.||++. ..+++.||||++... ..+.+.+|++++.++ +||||+++++++...+..++||||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred ceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhc-CCCCCcchhhhcccCCcEEEEeec
Confidence 7788999999999999984 567899999988752 224688999999888 999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+.++|.+++... ....++...+..++. .++.|||..+++|||++ ++..++
T Consensus 81 ~~~~l~~~~~~~----~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~ 137 (284)
T cd07860 81 LHQDLKKFMDAS----PLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 137 (284)
T ss_pred cccCHHHHHHhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC
Confidence 998999998754 233455655555544 89999999999888887 555555
No 215
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.48 E-value=4.6e-13 Score=139.32 Aligned_cols=130 Identities=18% Similarity=0.175 Sum_probs=98.6
Q ss_pred ceEEEeeeEeecCceEEEEEEe--------eCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN--------YEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~--------~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~ 540 (613)
+.|.+.+.||+|+||.||++.. .+...+|+|.+... ....+.+|++++.++.+||||+++++++...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 4589999999999999998642 12357999999853 22367889988887768999999999999999
Q ss_pred EEEEEecCCC-ccHHHHHHHhcCCC----------ccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 541 FVYLSLERCT-CSLNDLIYVLSGSF----------EEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 541 ~~~LV~E~~~-GsL~~~L~~~~~~~----------~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
..|+||||++ |+|.+++...+... ....++...+.+++. .++.|||+.+++||||| ++..++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~ 177 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDN 177 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCC
Confidence 9999999999 69999998753110 112344444444433 89999999999888887 554444
No 216
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.48 E-value=2.8e-13 Score=137.32 Aligned_cols=115 Identities=17% Similarity=0.166 Sum_probs=95.0
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc---------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~---------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
|+..+.||+|+||.||++. ..+++.||+|.+.... .+.+.+|++.+.++ +|+||+++++++...+..++
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL-NHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHc-CCCceehhhceeccCCeEEE
Confidence 6677899999999999974 6788999999987522 34788999999887 99999999999999999999
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
||||++ ++|.+++.... .+++.... +.++.|+.+||+.+++|||||
T Consensus 81 v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~ 130 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG------AFKEAVIINYTEQLLRGLSYLHENQIIHRDVK 130 (268)
T ss_pred EEeccCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 999999 59999997542 23444443 344499999999999988887
No 217
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.48 E-value=4.1e-13 Score=140.17 Aligned_cols=118 Identities=19% Similarity=0.180 Sum_probs=90.3
Q ss_pred eeeEeecCceEEEEEEe---eCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCcceeEEEEEEe--CCEEEEEecCCCc
Q 007199 478 NKEIAKGSNGTVVLEGN---YEGRSVAVKRLVKTH-HDVALKEIQNLIASDQHPNIVRWYGVESD--QDFVYLSLERCTC 551 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~~~---~~g~~VAVK~l~~~~-~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~--~~~~~LV~E~~~G 551 (613)
.+.||+|+||+||++.. .+++.+|+|.+.... ...+.+|+++|.++ +||||+++++++.. ....+++|||+.+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLREL-KHPNVISLQKVFLSHADRKVWLLFDYAEH 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhc-CCCCCcceeeeEecCCCcEEEEEEeccCC
Confidence 46899999999999853 356789999998643 34678999999888 99999999999864 4578999999999
Q ss_pred cHHHHHHHhcCCC---ccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 552 SLNDLIYVLSGSF---EEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 552 sL~~~L~~~~~~~---~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
+|.+++....... ....+++..+..+ ++.||.|||+.+|+|||||
T Consensus 85 ~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlk 135 (317)
T cd07868 85 DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLK 135 (317)
T ss_pred CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCC
Confidence 9999887542110 1123455544443 3489999999999888776
No 218
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.48 E-value=6.4e-13 Score=136.06 Aligned_cols=122 Identities=24% Similarity=0.244 Sum_probs=96.1
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
.|+..+.||+|+||.||++. ..+|+.||+|++... ..+.+.+|++++.++ +||||+++++++...+..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQL-KHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhC-CCCCEeeeeeEEeeCCEEEEEEe
Confidence 48889999999999999975 557899999988642 224678999999887 99999999999999999999999
Q ss_pred CCCc-cHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 548 RCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 548 ~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+++ .|..++.. ...+++.++..++. .+|.|||..+++||||| ++..++
T Consensus 81 ~~~~~~l~~~~~~------~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~ 137 (286)
T cd07847 81 YCDHTVLNELEKN------PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG 137 (286)
T ss_pred ccCccHHHHHHhC------CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC
Confidence 9995 66655542 22345555555444 89999999999888877 554444
No 219
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.47 E-value=2.1e-13 Score=139.68 Aligned_cols=116 Identities=23% Similarity=0.177 Sum_probs=95.5
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|+..+.||+|+||.||++. ..+|+.+|+|+++.. ....+.+|++++.++ +||||+++++++.+.+..++++||
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhc-CCCCeeeHHHHhccCCceEEEEec
Confidence 7788999999999999974 568999999998752 224678899988877 999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++|+|.+++.... ..+++..+..++. .||.|||..+++|||||
T Consensus 81 ~~~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~ 126 (284)
T cd07839 81 CDQDLKKYFDSCN-----GDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLK 126 (284)
T ss_pred CCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCC
Confidence 9999999887532 2355555555444 89999999999888777
No 220
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.47 E-value=5e-13 Score=135.49 Aligned_cols=115 Identities=19% Similarity=0.197 Sum_probs=93.9
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc---------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT---------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~---------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
|+..+.||+|+||+||++...+++.+|||.+... ..+.+.+|+++|.++ +|+||+++++++...+..+++
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSL-KHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhc-CCCCEeeEeeEeecCCeEEEE
Confidence 5678899999999999987778999999988742 123578899999888 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|||++ |+|.+++.... .++...+..+ +..++.+||..+++|+|||
T Consensus 81 ~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 129 (265)
T cd06631 81 MEFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIK 129 (265)
T ss_pred EecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcC
Confidence 99999 59999997532 2344444433 3389999999999887777
No 221
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.47 E-value=5.5e-13 Score=135.02 Aligned_cols=117 Identities=19% Similarity=0.172 Sum_probs=92.8
Q ss_pred eEEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
.|.+.+.||+|+||.||++....+..+|+|++... ..+.+.+|++++.++ +|||++++++++. .+..+++|||++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~-~~~~~~v~e~~~~ 84 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKL-RHDKLVPLYAVVS-EEPIYIVTEFMGK 84 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhC-CCCCeeeEEEEEc-CCCcEEEEEcCCC
Confidence 48889999999999999987666667999988753 335788999999887 9999999998875 456899999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|+|.++++... ...++......++ ..++.|||+.+++|||||
T Consensus 85 ~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~ 129 (260)
T cd05069 85 GSLLDFLKEGD----GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLR 129 (260)
T ss_pred CCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccC
Confidence 69999997642 2234444443333 389999999999888877
No 222
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.47 E-value=7e-13 Score=133.58 Aligned_cols=116 Identities=23% Similarity=0.263 Sum_probs=95.3
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-c
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-C 551 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-G 551 (613)
|++.+.||+|+||.||++...+++.+|+|.+... ..+.+.+|++++.++ +||||+++++++......+++|||++ |
T Consensus 6 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~ 84 (256)
T cd05112 6 LTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKL-SHPKLVQLYGVCTERSPICLVFEFMEHG 84 (256)
T ss_pred eEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhC-CCCCeeeEEEEEccCCceEEEEEcCCCC
Confidence 7888999999999999986666889999998863 345789999999887 99999999999999999999999999 6
Q ss_pred cHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 552 SLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
+|.+++.... ..+....+..++ ..++.+||+.+++|||+|
T Consensus 85 ~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~ 127 (256)
T cd05112 85 CLSDYLRAQR-----GKFSQETLLGMCLDVCEGMAYLESSNVIHRDLA 127 (256)
T ss_pred cHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 9999997532 233444444433 389999999999887766
No 223
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.47 E-value=5.3e-13 Score=135.14 Aligned_cols=118 Identities=18% Similarity=0.167 Sum_probs=94.3
Q ss_pred ceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
+.|.+.+.||+|+||.||++....+..+|+|.+... ..+.+.+|++++.++ +|+||+++++++.. ...+++|||++
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVKLHAVVTK-EPIYIITEFMA 83 (260)
T ss_pred cceeEEeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhc-CCCCcceEEEEEcC-CCeEEEEEeCC
Confidence 458999999999999999987667778999988753 345788999988887 99999999999887 77899999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++.... ....+......+ +..++.+||+.+++|||||
T Consensus 84 ~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~ 129 (260)
T cd05073 84 KGSLLDFLKSDE----GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLR 129 (260)
T ss_pred CCcHHHHHHhCC----ccccCHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence 69999997642 223343333333 3389999999998877776
No 224
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.47 E-value=3.9e-13 Score=137.35 Aligned_cols=117 Identities=22% Similarity=0.195 Sum_probs=93.1
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~~LV~E 547 (613)
|.+.+.||+|+||.||++. ..+++.+|+|+++... .....+|+..+.++.+|+||+++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 4677899999999999974 6678999999987531 124457888888886699999999999988 89999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|++|+|.+++.... ..++...+..++. .+|.|||..+++|||||
T Consensus 81 ~~~~~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~ 127 (282)
T cd07831 81 LMDMNLYELIKGRK-----RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIK 127 (282)
T ss_pred cCCccHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecccC
Confidence 99999999887532 2345555444444 89999999999887776
No 225
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.47 E-value=4.6e-13 Score=138.79 Aligned_cols=122 Identities=22% Similarity=0.234 Sum_probs=98.0
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
+.|...+.||+|+||.||++. ..+++.||+|.+... ..+.+.+|+.++..+ +||||+++++++...+..++||||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCEEEEeecc
Confidence 458999999999999999975 578999999998752 334678899888777 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
++ |+|.+++... .++..++..+ ++.++.|||+.+++||||| +++.++
T Consensus 98 ~~~~~L~~~~~~~-------~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~ 152 (297)
T cd06656 98 LAGGSLTDVVTET-------CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG 152 (297)
T ss_pred cCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence 99 6999998642 2344444443 3389999999999887777 555444
No 226
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.47 E-value=2e-13 Score=139.41 Aligned_cols=121 Identities=24% Similarity=0.255 Sum_probs=94.8
Q ss_pred EEEeeeEeecCceEEEEEEe------eCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
|.+.+.||+|+||.||++.. .+++.||||.++.. ..+.+.+|+++|.++ +||||+++++++...+..++
T Consensus 7 ~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l 85 (280)
T cd05049 7 IVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNF-QHENIVKFYGVCTEGDPPIM 85 (280)
T ss_pred hhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhc-CCCCchheeeEEecCCCeEE
Confidence 77889999999999999753 33578999998763 235789999999887 99999999999999999999
Q ss_pred EecCCC-ccHHHHHHHhcC--------CCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSG--------SFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~--------~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
+|||++ |+|.++++.... ......++...+..+ ++.++.+||..+++|||||
T Consensus 86 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlk 149 (280)
T cd05049 86 VFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLA 149 (280)
T ss_pred EEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccc
Confidence 999999 699999986531 011223444444333 3389999999999887776
No 227
>PTZ00284 protein kinase; Provisional
Probab=99.47 E-value=5e-13 Score=147.67 Aligned_cols=118 Identities=13% Similarity=0.008 Sum_probs=89.8
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec--cchHHHHHHHHHHHhc-----CCCCcceeEEEEEEeC-CEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK--THHDVALKEIQNLIAS-----DQHPNIVRWYGVESDQ-DFVY 543 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~--~~~~~~~~Ei~~L~~l-----~~HpnIV~l~g~~~~~-~~~~ 543 (613)
..|.+.++||+|+||+||++. ..+++.||||+++. .....+..|++++..+ ..|.+++++++++... .++|
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~ 208 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMC 208 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEE
Confidence 569999999999999999984 56788999999975 2334566777776655 2345689999988765 4899
Q ss_pred EEecCCCccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhc-CCceeeccc
Q 007199 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLP-VMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~-~~iiHrDlK 596 (613)
||||++.++|.+++..++ .+....+. ..++.||.|||. .+|||||||
T Consensus 209 iv~~~~g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlK 259 (467)
T PTZ00284 209 IVMPKYGPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLK 259 (467)
T ss_pred EEEeccCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCC
Confidence 999999889999987542 33444433 334489999997 599888887
No 228
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.47 E-value=6.4e-13 Score=134.85 Aligned_cols=116 Identities=24% Similarity=0.210 Sum_probs=92.5
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT--------HHDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFV 542 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~--------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~ 542 (613)
.|...+.||+|+||.||++. ..+++.||+|.+... ..+.+.+|++++.++ +||||+++++++.+. ..+
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNL-LHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhc-CCCCeeeEEeEeccCCCceE
Confidence 48889999999999999974 577899999988631 123678899999888 999999999998764 468
Q ss_pred EEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
+++|||++ |+|.+++.... .+...+..+++ ..+|.+||+.+++|+|||
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~ 133 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG------ALTENVTRKYTRQILEGVSYLHSNMIVHRDIK 133 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence 89999999 69999997532 23444444443 389999999999888777
No 229
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.47 E-value=4.5e-13 Score=137.00 Aligned_cols=123 Identities=18% Similarity=0.147 Sum_probs=93.3
Q ss_pred ceEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
++|++.+.||+|+||.||++.. .+++.||+|.+... ...++.+|+.++..+ +||||+++++++......
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~iv~~~~~~~~~~~~ 84 (277)
T cd05062 6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSQGQPT 84 (277)
T ss_pred HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCe
Confidence 4589999999999999998632 23567999998652 233688999888777 999999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHhcCCCc----cccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSFE----EQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~~----~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
++||||++ |+|.++++..+.... ........+.. .++.++.|||+.+++|||||
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlk 146 (277)
T cd05062 85 LVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLA 146 (277)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcc
Confidence 99999999 699999976432111 11122333333 34489999999998887776
No 230
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.47 E-value=6.2e-13 Score=137.74 Aligned_cols=116 Identities=21% Similarity=0.210 Sum_probs=95.2
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
+.|...+.||+|+||.||++. ..+++.+|+|.+... ..+.+.+|+.++..+ +||||+++++++...+..|+||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~-~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN-KNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhC-CCCCEeeEEEEEEeCCEEEEeecc
Confidence 458999999999999999974 678899999998753 334788899888776 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
++ |+|.++++.. .+....... .++.++.|||..+++|||||
T Consensus 99 ~~~~~L~~~~~~~-------~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLk 143 (296)
T cd06654 99 LAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143 (296)
T ss_pred cCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 99 6999998642 233334333 33489999999999888777
No 231
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.47 E-value=2.4e-13 Score=139.13 Aligned_cols=117 Identities=21% Similarity=0.210 Sum_probs=96.3
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
.|++.+.||+|+||.||++. ..++..+|+|.+.... .+.+.+|++++.++ +||||+++++.+...+..|+||||+
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSEC-KHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhC-CCCceeEEEEEEecCCeEEEEeecc
Confidence 37888899999999999975 4578999999987532 34688999999888 8999999999999999999999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+ |+|.+++.... ..+++..+.+++. .++.|||..+++|||+|
T Consensus 85 ~~~~L~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~ 130 (280)
T cd06611 85 DGGALDSIMLELE-----RGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLK 130 (280)
T ss_pred CCCcHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 9 59999987632 2355555555444 89999999999887776
No 232
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.47 E-value=7e-13 Score=137.78 Aligned_cols=116 Identities=15% Similarity=0.098 Sum_probs=94.0
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|+..+.||+|+||.||++ ...+++.||+|.+.... .+.+.+|++++..+ +||||+++++.+...++.++||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFA-ENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhC-CCCCeeeeEEEEecCCEEEEEE
Confidence 3788899999999999997 46778899999987532 33677899888777 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
||++ |+|.+++.... .+++..+..++ +.++.|||+.+++|||+|
T Consensus 81 e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 128 (305)
T cd05609 81 EYVEGGDCATLLKNIG------ALPVDMARMYFAETVLALEYLHNYGIVHRDLK 128 (305)
T ss_pred ecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCc
Confidence 9999 59999997532 34444444333 389999999998777766
No 233
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.47 E-value=5.7e-13 Score=137.20 Aligned_cols=123 Identities=18% Similarity=0.135 Sum_probs=93.1
Q ss_pred ceEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+.|.+.+.||+|+||.||++.. ..+..||+|.+.... ...+.+|+..+.++ +||||+++++++...+..
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 84 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGF-TCHHVVRLLGVVSKGQPT 84 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEEEEcCCCCc
Confidence 4588999999999999999632 234579999887532 23677899888777 999999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHhcCCCc----cccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSFE----EQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~~----~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
|+||||++ |+|.++++....... ........+.. .++.++.|||+.+++|||||
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dik 146 (288)
T cd05061 85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLA 146 (288)
T ss_pred EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCC
Confidence 99999999 799999986431111 11223333333 33489999999999887776
No 234
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.46 E-value=6.1e-13 Score=138.81 Aligned_cols=124 Identities=21% Similarity=0.188 Sum_probs=99.3
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|+..+.||+|+||.||++. ..+++.+|+|.+... ..+.+.+|++++..+ +||||+++++.+...+..|+||
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL-DHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhC-CCCCchhheeeeecCCEEEEEE
Confidence 48889999999999999975 456899999998863 223688899988777 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||+. |+|.+++... ....+++.....++ +.++.|||..+++|+||| ++..++
T Consensus 81 e~~~~~~L~~~~~~~----~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~ 140 (316)
T cd05574 81 DYCPGGELFRLLQRQ----PGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG 140 (316)
T ss_pred EecCCCCHHHHHHhC----CCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC
Confidence 9999 5999998753 22345555554443 389999999999888877 554443
No 235
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.46 E-value=7.6e-13 Score=133.09 Aligned_cols=117 Identities=17% Similarity=0.191 Sum_probs=97.2
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|+..+.||+|+||.||++ ...+++.+|+|++... ....+.+|+++|+++ +||||+++++.+...+..++||||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL-SHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhC-CCCchhheeeeEecCCEEEEEEec
Confidence 788999999999999997 4568899999998753 234788999999887 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++ ++|.+++.... ...+++..+..++. .++.+||+.+++|+|+|
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~ 128 (256)
T cd08220 81 APGGTLAEYIQKRC----NSLLDEDTILHFFVQILLALHHVHTKLILHRDLK 128 (256)
T ss_pred CCCCCHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 99 59999998642 23355555554443 89999999999998888
No 236
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.46 E-value=3e-13 Score=137.83 Aligned_cols=114 Identities=20% Similarity=0.162 Sum_probs=85.5
Q ss_pred eEeecCceEEEEEEeeCCc---EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-c
Q 007199 480 EIAKGSNGTVVLEGNYEGR---SVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-C 551 (613)
Q Consensus 480 ~LG~G~fG~Vyk~~~~~g~---~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-G 551 (613)
+||+|+||.||++...++. .+++|.+... ..+.+.+|+..+..+ +||||++++++|......|+|||||+ |
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL-QHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc-CCcchhheEEEecCCCccEEEEecCCCC
Confidence 6899999999997544433 4667766642 234788999888766 99999999999999999999999999 6
Q ss_pred cHHHHHHHhcCCCccccCCHHHH---HHHHHHHHHHHhcCCceeeccc
Q 007199 552 SLNDLIYVLSGSFEEQLNAKEQD---SNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~~~---~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+|.++++.... .....+...+ ...++.||.|||+.+++|||||
T Consensus 81 ~L~~~l~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dik 126 (268)
T cd05086 81 DLKSYLSQEQW--HRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLA 126 (268)
T ss_pred cHHHHHHhhhc--ccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCc
Confidence 99999986431 1122333333 3334489999999998777666
No 237
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.46 E-value=4.1e-13 Score=136.39 Aligned_cols=121 Identities=16% Similarity=0.066 Sum_probs=91.8
Q ss_pred EEEeeeEeecCceEEEEEEee----CCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCE----
Q 007199 475 VVFNKEIAKGSNGTVVLEGNY----EGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDF---- 541 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~----~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~---- 541 (613)
|.+.+.||+|+||.||++... .+..||+|+++.. ..+.+.+|++.+..+ +||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDF-DHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhC-CCCCeeeEEeeeccCCccccC
Confidence 356789999999999997532 2467999998753 234788999988877 99999999998876554
Q ss_pred --EEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 542 --VYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 542 --~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
.+++|||++ |+|.+++...+.......+++....+++. .|+.|||+.+++|||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlk 140 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLA 140 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 799999999 79999997643211223455555555444 89999999998877766
No 238
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.46 E-value=4.3e-13 Score=137.44 Aligned_cols=112 Identities=17% Similarity=0.164 Sum_probs=90.0
Q ss_pred eEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|++.++||+|+||.||++ ...+++.||+|.+... ....+.+|++++.++ +||||+++++++...+..++||||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKC-DSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhC-CCCCeeeEEEEEEECCEEEEEEec
Confidence 3677889999999999997 4678899999998753 224688999998877 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHH---HHHHHHHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQ---DSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~---~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++ |+|..+.. +++.. +...++.++.|||+.+++|+|||
T Consensus 81 ~~~~~l~~~~~----------~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlk 122 (279)
T cd06619 81 MDGGSLDVYRK----------IPEHVLGRIAVAVVKGLTYLWSLKILHRDVK 122 (279)
T ss_pred CCCCChHHhhc----------CCHHHHHHHHHHHHHHHHHHHHCCEeeCCCC
Confidence 99 58765431 22333 33444489999999999888776
No 239
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.46 E-value=5e-13 Score=138.73 Aligned_cols=124 Identities=17% Similarity=0.187 Sum_probs=94.7
Q ss_pred ceEEEeeeEeecCceEEEEEEe--------eCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN--------YEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~--------~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~ 540 (613)
+.|.+.+.||+|+||.||++.. .++..||+|.+... ..+.+.+|+.++..+.+||||+++++++....
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 4588999999999999998742 23457999988752 23468899988877658999999999999999
Q ss_pred EEEEEecCCC-ccHHHHHHHhcCCC----------ccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 541 FVYLSLERCT-CSLNDLIYVLSGSF----------EEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 ~~~LV~E~~~-GsL~~~L~~~~~~~----------~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
..+++|||++ |+|.+++...+... ....++.....+ .++.++.|||+.+++|||||
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk 164 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA 164 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 9999999999 69999998753110 112233333333 33389999999999888776
No 240
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.46 E-value=1.2e-13 Score=147.72 Aligned_cols=124 Identities=20% Similarity=0.174 Sum_probs=103.7
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
..|...+.||-|+||+|.++. ..+...+|+|.+++.+ ...+..|-.||... +.+.||+||-.|.+++.+|+|
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEA-Dn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEA-DNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhc-CCcceEEEEEEeccCCceEEE
Confidence 448889999999999999964 6677789999998732 23567788888877 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
|||++ |++..+|.+ ...++++.+..++. .|+++.|..++|||||| |+++|||
T Consensus 708 MdYIPGGDmMSLLIr------mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGH 767 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIR------MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGH 767 (1034)
T ss_pred EeccCCccHHHHHHH------hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCc
Confidence 99999 699999984 34666666666555 89999999999999998 7788875
No 241
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.46 E-value=1.2e-12 Score=132.06 Aligned_cols=118 Identities=24% Similarity=0.287 Sum_probs=96.8
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
+.|++.+.||+|+||.||++. ..+++.+|+|.+... ..+.+.+|++++.++ +||||+++++++...+..|++|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKEC-RHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhC-CCCChhceEEEEEeCCEEEEEEeC
Confidence 348899999999999999975 567889999998863 345788999988887 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++ ++|.+++.... ..+++..+..++. .++.|||+.+++|+|+|
T Consensus 82 ~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~ 128 (262)
T cd06613 82 CGGGSLQDIYQVTR-----GPLSELQIAYVCRETLKGLAYLHETGKIHRDIK 128 (262)
T ss_pred CCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHhCCceecCCC
Confidence 99 59999987642 2344444444433 89999999999887777
No 242
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.46 E-value=5e-13 Score=135.83 Aligned_cols=112 Identities=13% Similarity=0.030 Sum_probs=86.5
Q ss_pred eeEeecCceEEEEEEee-------------CCcEEEEEEeeccch---HHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 479 KEIAKGSNGTVVLEGNY-------------EGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~-------------~g~~VAVK~l~~~~~---~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+.||+|+||.||++... ....||+|.+..... ..+..|+.++..+ +||||+++++++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l-~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQV-SHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCC
Confidence 36899999999997421 123589998875333 3677888888777 999999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+++|||++ |+|..+++.. ...+.+.+..+++. .|+.|||+.+++|||||
T Consensus 80 ~lv~e~~~~~~l~~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlk 132 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRK-----SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVC 132 (262)
T ss_pred EEEEecccCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCC
Confidence 99999999 6998888753 23355555555444 89999999998887776
No 243
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.46 E-value=6.8e-13 Score=136.85 Aligned_cols=118 Identities=19% Similarity=0.216 Sum_probs=95.3
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
+.|++.+.||+|+||.||++. ..+++.+|+|.+.... .+.+.+|++++..+ +||||+++++++......++||||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATC-NHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhC-CCCcEeeeEEEEEeCCeEEEEEec
Confidence 458899999999999999975 5678999999988643 34678899888777 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++ |+|..++.... ..+....+..++. .++.|||..+++|||+|
T Consensus 91 ~~~~~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlk 137 (292)
T cd06644 91 CPGGAVDAIMLELD-----RGLTEPQIQVICRQMLEALQYLHSMKIIHRDLK 137 (292)
T ss_pred CCCCcHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCC
Confidence 99 58888876532 2344455444444 89999999998877766
No 244
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.46 E-value=7.8e-13 Score=136.29 Aligned_cols=122 Identities=19% Similarity=0.156 Sum_probs=96.9
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCE-----E
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDF-----V 542 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~-----~ 542 (613)
.|+..+.||+|+||.||++. ..+++.||+|.++.. ....+.+|+.++.++.+||||+++++++...+. .
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~ 81 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSL 81 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceE
Confidence 48889999999999999975 567899999988752 224688899999888567999999999987665 8
Q ss_pred EEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+||||++|+|.+++...... ....+++..+..++. .+|.|||+.+++|||||
T Consensus 82 ~lv~e~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~ 137 (295)
T cd07837 82 YLVFEYLDSDLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLK 137 (295)
T ss_pred EEEeeccCcCHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence 999999999999998764321 123455555555444 89999999999888877
No 245
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.46 E-value=8.1e-13 Score=136.03 Aligned_cols=116 Identities=19% Similarity=0.079 Sum_probs=94.5
Q ss_pred EEEeeeEeecCceEEEEEEe----eCCcEEEEEEeecc-------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKT-------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~----~~g~~VAVK~l~~~-------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
|++.+.||+|+||.||++.. .+|+.||+|+++.. ..+.+.+|+++|.++.+|+||+++++++......|
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~ 81 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLH 81 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEE
Confidence 67889999999999999743 47899999998752 23467889999988867999999999999999999
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
+||||++ |+|.+++.... .++...+..+ ++.+|.|||+.+++|||||
T Consensus 82 lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~ 132 (290)
T cd05613 82 LILDYINGGELFTHLSQRE------RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIK 132 (290)
T ss_pred EEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 9999999 69999997532 3444444443 3389999999999888777
No 246
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.46 E-value=5.6e-13 Score=134.29 Aligned_cols=111 Identities=14% Similarity=0.055 Sum_probs=87.4
Q ss_pred eeEeecCceEEEEEEee-CC----------cEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 479 KEIAKGSNGTVVLEGNY-EG----------RSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~-~g----------~~VAVK~l~~~~--~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.||+|+||.||++... ++ ..+++|.+.... ...+.+|+++|.++ +||||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQL-SHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcC-CCcchhheeeEEec-CCcEEE
Confidence 46899999999997533 33 358888877533 45888999888777 99999999999988 778999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|||++ |+|.++++... ..++..++..++. .++.|||+.+++|||||
T Consensus 79 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlk 128 (259)
T cd05037 79 EEYVKFGPLDVFLHREK-----NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVC 128 (259)
T ss_pred EEcCCCCcHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCc
Confidence 99999 69999998642 1455555554443 89999999998887777
No 247
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.45 E-value=6e-13 Score=137.06 Aligned_cols=122 Identities=22% Similarity=0.249 Sum_probs=96.1
Q ss_pred eEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
.|.+.+.||+|+||+||++.. .++..+|+|.+.... .+.+.+|++++.++ +||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 6 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNL-QHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEecCCccEE
Confidence 488999999999999999742 334579999987632 34788999999888 99999999999999999999
Q ss_pred EecCCC-ccHHHHHHHhcCC-------CccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSGS-------FEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~-------~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
||||++ |+|.+++...... .....+++.....++. .++.|||+.+++|||||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlk 147 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLA 147 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccC
Confidence 999999 6999999864310 0122356555555544 89999999999887766
No 248
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.45 E-value=6.8e-13 Score=138.01 Aligned_cols=118 Identities=23% Similarity=0.278 Sum_probs=95.5
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|...+.||+|+||.||++. ..+++.||+|.+... ..+.+.+|++++..+ +||||++++++|...+..|+|
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQL-RHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhC-CCCCEEEEEEEEEeCCeEEEE
Confidence 448888999999999999975 567899999998642 223688999988887 999999999999999999999
Q ss_pred ecCCCccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|||++|+|.+++.... ..+....+..+ ++.++.|||..+++||||+
T Consensus 94 ~e~~~g~l~~~~~~~~-----~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~ 142 (307)
T cd06607 94 MEYCLGSASDILEVHK-----KPLQEVEIAAICHGALQGLAYLHSHERIHRDIK 142 (307)
T ss_pred HHhhCCCHHHHHHHcc-----cCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 9999999988886532 23455554444 3489999999999887766
No 249
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.45 E-value=7e-13 Score=136.00 Aligned_cols=114 Identities=26% Similarity=0.176 Sum_probs=91.5
Q ss_pred EEEeeeEeecCceEEEEEE-----eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-----NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-----~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~~ 543 (613)
|+..+.||+|+||+||++. ..+++.||+|.++.. ..+.+.+|+++|.++ +||||+++++++... ...+
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 84 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL-YHENIVKYKGCCSEQGGKGLQ 84 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhC-CCCCEeeEEEEEecCCCceEE
Confidence 4888999999999998742 356789999998753 345788999999887 999999999988764 3689
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++|||++ |+|.+++... .+++.++..++. .++.|||+.+++|||||
T Consensus 85 lv~e~~~~~~l~~~~~~~-------~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlk 134 (283)
T cd05080 85 LIMEYVPLGSLRDYLPKH-------KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLA 134 (283)
T ss_pred EEecCCCCCCHHHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHCCeeccccC
Confidence 9999999 6999999753 255555555544 89999999998887766
No 250
>PHA02988 hypothetical protein; Provisional
Probab=99.45 E-value=7.9e-13 Score=136.21 Aligned_cols=110 Identities=20% Similarity=0.230 Sum_probs=85.7
Q ss_pred eeEeecCceEEEEEEeeCCcEEEEEEeeccc------hHHHHHHHHHHHhcCCCCcceeEEEEEEe----CCEEEEEecC
Q 007199 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH------HDVALKEIQNLIASDQHPNIVRWYGVESD----QDFVYLSLER 548 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~----~~~~~LV~E~ 548 (613)
..||+|++|.||++. .+|+.||||+++... .+.+.+|+++|.++ +||||+++++++.+ ....++||||
T Consensus 26 ~~i~~g~~~~v~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGI-FNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRI-DSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEE-ECCEEEEEEeccccccccHHHHHHHHHHHHHHHhc-CCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 478999999999964 589999999997521 34677999999888 99999999999987 3478999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcC-Cceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPV-MENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~-~iiHrDlK 596 (613)
|+ |+|.++++..+ .++.....++ ++.++.+||.. +++|||||
T Consensus 104 ~~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlk 150 (283)
T PHA02988 104 CTRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLT 150 (283)
T ss_pred CCCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCC
Confidence 99 69999998642 2333333333 33899999984 77776666
No 251
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.45 E-value=6.6e-13 Score=136.80 Aligned_cols=124 Identities=19% Similarity=0.209 Sum_probs=95.4
Q ss_pred ceEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+.|+..+.||+|+||.||++.. .....+|+|.+.... ...+.+|++++.++.+|+||+++++++...+..
T Consensus 12 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~ 91 (293)
T cd05053 12 DRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPL 91 (293)
T ss_pred hHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCe
Confidence 3488999999999999999743 233679999987532 236788998887776899999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHhcCC----------CccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGS----------FEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~----------~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+++|||++ |+|.++++..... .....++...+..++. .++.|||..+++|||||
T Consensus 92 ~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlk 159 (293)
T cd05053 92 YVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLA 159 (293)
T ss_pred EEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 99999999 7999999864210 0123344444444443 89999999999888877
No 252
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.45 E-value=4.8e-13 Score=135.24 Aligned_cols=112 Identities=22% Similarity=0.234 Sum_probs=88.8
Q ss_pred eeEeecCceEEEEEE-eeCCcEEEEEEeeccch------HHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+.||+|+||.||++. ..+++.||||.+++... ..+..|...+....+|+||+++++++...+..|+||||++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 568999999999984 56789999999875321 2345565555555699999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.++++.. ..+++.++.+++. .+|.|||+.+++||||+
T Consensus 82 ~~L~~~l~~~------~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~ 124 (260)
T cd05611 82 GDCASLIKTL------GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIK 124 (260)
T ss_pred CCHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 6999999753 2456666665544 89999999999887776
No 253
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.45 E-value=5.1e-13 Score=138.11 Aligned_cols=122 Identities=20% Similarity=0.152 Sum_probs=93.2
Q ss_pred eEEEeeeEeecCceEEEEEEe-----------------eCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN-----------------YEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRW 532 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~-----------------~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l 532 (613)
.|++.+.||+|+||.||++.. .+...||+|.+... ..+.+.+|+++|.++ +|+||+++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~~ 84 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRL-KDPNIIRL 84 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcceE
Confidence 488999999999999998631 12346999998753 234788999999888 99999999
Q ss_pred EEEEEeCCEEEEEecCCC-ccHHHHHHHhcCCC-----ccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 533 YGVESDQDFVYLSLERCT-CSLNDLIYVLSGSF-----EEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 533 ~g~~~~~~~~~LV~E~~~-GsL~~~L~~~~~~~-----~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++++...+..+++|||++ |+|.+++....... ....+....+.+++. .++.|||+.+++|||||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlk 157 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLA 157 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCC
Confidence 999999999999999999 69999998643110 011233444444443 89999999998776665
No 254
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.45 E-value=3.4e-13 Score=136.81 Aligned_cols=119 Identities=19% Similarity=0.257 Sum_probs=96.1
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|.+.+.||+|+||.||++. ..+++.+|||.+... ..+.+.+|++++..+ +||||+++++++...+..+++||
T Consensus 4 y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~~v~e 82 (267)
T cd08229 4 FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYYASFIEDNELNIVLE 82 (267)
T ss_pred hhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHc-cCCchhhhhheeEeCCeEEEEEE
Confidence 6778899999999999975 678999999987642 234788999988887 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|++ ++|.+++..... ....+++.....++. .++.|||+.+++|+|||
T Consensus 83 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~ 133 (267)
T cd08229 83 LADAGDLSRMIKHFKK--QKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIK 133 (267)
T ss_pred ecCCCCHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 999 599999875321 223455555544443 89999999999887777
No 255
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.45 E-value=5.7e-13 Score=135.50 Aligned_cols=120 Identities=18% Similarity=0.124 Sum_probs=88.5
Q ss_pred EEeeeEeecCceEEEEEEe-eCCc--EEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC------CE
Q 007199 476 VFNKEIAKGSNGTVVLEGN-YEGR--SVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ------DF 541 (613)
Q Consensus 476 ~~~~~LG~G~fG~Vyk~~~-~~g~--~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~------~~ 541 (613)
.+.+.||+|+||.||++.. .++. .+|+|.++.. ..+.+.+|++++..+ +||||+++++++... ..
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEF-DHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEccCCcccCCCC
Confidence 4567899999999999853 3343 5899988652 234788899999887 999999999987532 25
Q ss_pred EEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 542 VYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 542 ~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
.+++|||++ |+|.+++...+.......++......++. .|+.|||..+++|||||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 139 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLA 139 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 789999999 79999886432111223345555544443 89999999999887777
No 256
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.45 E-value=7.6e-13 Score=138.20 Aligned_cols=124 Identities=19% Similarity=0.193 Sum_probs=95.1
Q ss_pred ceEEEeeeEeecCceEEEEEEe--------eCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN--------YEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~--------~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~ 540 (613)
+.|.+.+.||+|+||.||++.. .....+|+|+++.. ..+.+.+|++++.++.+||||+++++++...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 3488999999999999999731 23457999998853 22367889988888767999999999999999
Q ss_pred EEEEEecCCC-ccHHHHHHHhcCC----------CccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 541 FVYLSLERCT-CSLNDLIYVLSGS----------FEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 ~~~LV~E~~~-GsL~~~L~~~~~~----------~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
..+++|||++ |+|.+++...+.. .....+......++ ++.++.|||+.+++|||||
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 161 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLA 161 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 9999999999 7999999864310 01123444444333 3389999999999888887
No 257
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.45 E-value=1.7e-12 Score=133.73 Aligned_cols=129 Identities=26% Similarity=0.247 Sum_probs=99.7
Q ss_pred CceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-----EEE
Q 007199 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQD-----FVY 543 (613)
Q Consensus 472 ~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-----~~~ 543 (613)
.+.|.+.+.||+|+||.||++. ..+++.+|+|.+... ..+.+.+|+.++.++.+||||+++++++...+ ..+
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~ 100 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLW 100 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeE
Confidence 3559999999999999999974 567899999998753 33567889988888778999999999987643 589
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+||||++ |+|.++++.... ....+++..+..++. .++++||+.+++||||| ++..++
T Consensus 101 lv~ey~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 101 LVLELCNGGSVTELVKGLLI--CGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EEEEECCCCcHHHHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC
Confidence 9999999 699999875321 223455555544443 89999999999888877 454444
No 258
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.45 E-value=4.1e-13 Score=141.20 Aligned_cols=113 Identities=19% Similarity=0.108 Sum_probs=89.3
Q ss_pred eeEeec--CceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 479 KEIAKG--SNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 479 ~~LG~G--~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
..||+| +||+||++. ..+|+.||+|++... ..+.+.+|+.++..+ +||||++++++|...+..++||||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF-RHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcceEeeeEecCCceEEEEeccc
Confidence 356666 999999974 678999999998752 234678888777666 99999999999999999999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++.... ...+++..+..+ ++.+|.|||+.+++|||||
T Consensus 83 ~~~l~~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlk 128 (328)
T cd08226 83 YGSANSLLKTYF----PEGMSEALIGNILFGALRGLNYLHQNGYIHRNIK 128 (328)
T ss_pred CCCHHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 69999998642 223555554343 3489999999999888877
No 259
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.45 E-value=8.5e-13 Score=135.06 Aligned_cols=123 Identities=16% Similarity=0.056 Sum_probs=95.8
Q ss_pred ceEEEeeeEeecCceEEEEEEeeC-----CcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEe-CCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGNYE-----GRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESD-QDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~~~-----g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~-~~~~ 542 (613)
+.|.+.+.||+|+||.||++.... +..||+|++... ..+.+.+|++++.++ +||||+++++++.. ....
T Consensus 6 ~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 6 DRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGL-SHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhC-CCCCCCeEEEEEecCCCCC
Confidence 458899999999999999985443 678999988752 234688999988888 99999999998776 4688
Q ss_pred EEEecCCC-ccHHHHHHHhcCC--CccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGS--FEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~--~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++++||++ |+|.+++...+.. .....++......++. .|+.|||+.+++|||||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~ 144 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIA 144 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence 99999999 7999999865311 0113455555555444 89999999999887777
No 260
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.45 E-value=9.5e-13 Score=132.85 Aligned_cols=117 Identities=23% Similarity=0.241 Sum_probs=92.1
Q ss_pred eEEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeEEEEEE-eCCEEEEEecCCC-
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT-HHDVALKEIQNLIASDQHPNIVRWYGVES-DQDFVYLSLERCT- 550 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~-~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~-~~~~~~LV~E~~~- 550 (613)
.|.+.+.||+|+||.||++. ..|..||+|.++.. ..+.+.+|++++.++ +|+|++++++++. ..+..+++|||++
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~-~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGD-YRGNKVAVKCIKNDATAQAFLAEASVMTQL-RHSNLVQLLGVIVEEKGGLYIVTEYMAK 84 (256)
T ss_pred hCeeeeeecccCCCeEEEEE-EcCCcEEEEEeCCCchHHHHHHHHHHHHhC-CCCCeeeEEEEEEcCCCceEEEEECCCC
Confidence 37889999999999999964 45888999998763 345788999988887 9999999999765 4567999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|+|.++++... ...++......++ +.++.|||..+++|||||
T Consensus 85 ~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 129 (256)
T cd05082 85 GSLVDYLRSRG----RSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLA 129 (256)
T ss_pred CcHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccc
Confidence 69999998642 2234444444433 389999999998877766
No 261
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.45 E-value=6.4e-13 Score=135.78 Aligned_cols=122 Identities=24% Similarity=0.178 Sum_probs=95.8
Q ss_pred eEEEeeeEeecCceEEEEEEe-----eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEe--CCEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN-----YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESD--QDFV 542 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~-----~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~--~~~~ 542 (613)
.|...+.||+|+||.||++.. .++..+|||.+.... .+.+.+|++.+..+ +||||+++++++.. ....
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-DHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC-CCCChheEEeeeecCCCCce
Confidence 367778999999999999752 347889999998643 45799999999887 99999999999887 5589
Q ss_pred EEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCC
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKAN 601 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~d 601 (613)
+++|||++ |+|.+++.... ..+.......++ ..+|.+||..+++|||+| +++.+
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~-----~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~ 145 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR-----DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESE 145 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc-----cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCC
Confidence 99999999 69999998642 134444444433 389999999999888877 55544
No 262
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.45 E-value=8e-13 Score=135.29 Aligned_cols=117 Identities=21% Similarity=0.126 Sum_probs=92.8
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCc----EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGR----SVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~----~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
..|++.+.||+|+||.||++. ..+|+ .+|+|.+.... ...+.+|++.+.++ +||||+++++++.. ...+
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~-~~~~ 84 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASV-DHPHVVRLLGICLS-SQVQ 84 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhC-CCCCcceEEEEEec-CceE
Confidence 348889999999999999975 34443 58999887632 34788999999887 99999999999987 7899
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+||||++ |+|.++++... ..+++..+.+++. .|+.|||+.+++|||||
T Consensus 85 ~v~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~ 136 (279)
T cd05057 85 LITQLMPLGCLLDYVRNHK-----DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLA 136 (279)
T ss_pred EEEecCCCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccC
Confidence 9999999 79999998642 2345555544444 89999999998887766
No 263
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.45 E-value=5.5e-13 Score=137.38 Aligned_cols=121 Identities=21% Similarity=0.201 Sum_probs=92.2
Q ss_pred EEEeeeEeecCceEEEEEEe------eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
|++.+.||+|+||.||++.. .....+|+|.+.... .+.+.+|++++..+ +||||+++++.+...+..++
T Consensus 2 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 2 LVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQV-NHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred ccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhC-CCCCEeeEEEEEecCCCcEE
Confidence 67788999999999999742 123578999887532 34688999988877 99999999999999999999
Q ss_pred EecCCC-ccHHHHHHHhcCCC------------------ccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSGSF------------------EEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~------------------~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+|||+. |+|.+++...+... ....++...+..++. .++.|||+.+++|||||
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik 154 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA 154 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence 999999 79999997642110 011234444444333 89999999999887777
No 264
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.45 E-value=8.6e-13 Score=134.30 Aligned_cols=115 Identities=23% Similarity=0.204 Sum_probs=92.9
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-------------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-------------HHDVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-------------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~ 540 (613)
|...+.||+|+||.||++. ..+|+.+|+|.++.. ..+.+.+|++++.++ +||||+++++++...+
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDL-DHLNIVQYLGFETTEE 81 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhc-CCCCcceEEEEeccCC
Confidence 6788899999999999974 567899999988631 123577899888777 9999999999999999
Q ss_pred EEEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 541 FVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 ~~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
..++||||++ |+|.++++.. ..+...++.. .++.++.+||+.+++|||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~------~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 135 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY------GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLK 135 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCC
Confidence 9999999999 6999999753 2344444443 34489999999998887776
No 265
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.45 E-value=6.4e-13 Score=137.53 Aligned_cols=123 Identities=20% Similarity=0.217 Sum_probs=94.0
Q ss_pred eEEEeeeEeecCceEEEEEEe-eCCc--EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN-YEGR--SVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~-~~g~--~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+.++||+|+||.||++.. .++. .+|+|.++.. ..+.+.+|++++.++.+||||+++++++...+..+++|
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~ 82 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAI 82 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEE
Confidence 478899999999999999753 3443 4788888742 23468899999988868999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCC----------ccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSF----------EEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~----------~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
||++ |+|.++++...... ....++...+..++. .|+.|||+.+++|||||
T Consensus 83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlk 146 (297)
T cd05089 83 EYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLA 146 (297)
T ss_pred EecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCC
Confidence 9999 79999997642110 012344444444433 89999999999887776
No 266
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.45 E-value=8.6e-13 Score=134.56 Aligned_cols=129 Identities=15% Similarity=0.083 Sum_probs=97.4
Q ss_pred ceEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+.|.+.+.||+|+||.||++.. .++..||+|.+.... ...+.+|+++|..+ +||||+++++++......
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEF-NCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhC-CCCceeEEEEEEcCCCCc
Confidence 3488999999999999999742 234689999987532 23688999988887 999999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHhcCCC----ccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSF----EEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~----~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
++||||++ |+|.+++....... ....+....+.++ ++.++.|||+.+++||||| ++..++
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~ 156 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDL 156 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCC
Confidence 99999999 79999998643110 0112344444443 3389999999999888776 555444
No 267
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.45 E-value=5.1e-13 Score=136.68 Aligned_cols=121 Identities=23% Similarity=0.202 Sum_probs=96.5
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|...+.||+|+||.||++. ..+++.||+|.+... ..+.+.+|+..+.++ +||||+++++++...+..++||||
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhc-CCCCEeEEEEEEEeCCeEEEEEEe
Confidence 47788899999999999974 567899999988742 234688899988887 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
++ |+|.+++... .++...+..++ +.++.+||..+++|+|+| ++..++
T Consensus 84 ~~~~~l~~~i~~~-------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~ 138 (277)
T cd06641 84 LGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG 138 (277)
T ss_pred CCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC
Confidence 99 6999998642 23444444333 389999999999888877 554444
No 268
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.45 E-value=1.2e-12 Score=134.00 Aligned_cols=116 Identities=21% Similarity=0.231 Sum_probs=95.7
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|++.+.||+|+||.||++. ..+|+.||+|++.... .+.+.+|+.++.++ +||||+++++++...+..++||||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC-QHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhC-CCCCCcceeeEEecCCeeEEEecc
Confidence 7888999999999999985 5678999999988532 34788999999888 899999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
+.++|.+++.... ..+.+..+..++ +.++.|||+.+++|+|||
T Consensus 81 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 126 (286)
T cd07832 81 MPSDLSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLK 126 (286)
T ss_pred cCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcC
Confidence 9669999997632 334555554443 389999999998887777
No 269
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.45 E-value=1.2e-13 Score=149.00 Aligned_cols=116 Identities=22% Similarity=0.239 Sum_probs=96.7
Q ss_pred eEeecCceEEEEE-EeeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-ccHH
Q 007199 480 EIAKGSNGTVVLE-GNYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CSLN 554 (613)
Q Consensus 480 ~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-GsL~ 554 (613)
+||+|.||+||-+ .+.+...+|||.+... ..+-+..||....++ +|.|||+++|++..++++-|.||-++ |||.
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~L-rHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTL-RHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHH-hhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 6999999999986 4777888999999863 334678899766666 99999999999999999999999999 6999
Q ss_pred HHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 555 DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 555 ~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++|+..-+......-......+++.+||+|||.+.|+|||||
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIK 702 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIK 702 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeecccc
Confidence 999986554444444555666777799999999999999998
No 270
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.45 E-value=7.3e-13 Score=136.22 Aligned_cols=122 Identities=20% Similarity=0.144 Sum_probs=94.5
Q ss_pred eEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
.|+..+.||+|+||.||++.. .++..||+|++.... .+.+.+|++.+.++ +||||+++++++...+..+
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l-~h~~iv~~~~~~~~~~~~~ 84 (288)
T cd05050 6 NIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF-DHPNIVKLLGVCAVGKPMC 84 (288)
T ss_pred hceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCccE
Confidence 378889999999999999753 256789999987632 34688999988887 9999999999999999999
Q ss_pred EEecCCC-ccHHHHHHHhcCCCc----------------cccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFE----------------EQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~----------------~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++|||++ |+|.+++........ ...++...+..++. .++.|||..+++|||||
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~ 157 (288)
T cd05050 85 LLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLA 157 (288)
T ss_pred EEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 9999999 699999986421100 11233343333333 89999999999887777
No 271
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.45 E-value=7.3e-13 Score=133.55 Aligned_cols=116 Identities=22% Similarity=0.243 Sum_probs=92.6
Q ss_pred eEEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc-chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-c
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT-HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-C 551 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~-~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-G 551 (613)
.|++.+.||+|+||.||++ ..+++.||+|.++.. ..+.+.+|+.++.++ +||||+++++++... ..+++|||++ |
T Consensus 7 ~~~~~~~lg~g~~g~v~~~-~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~-~~~~v~e~~~~~ 83 (254)
T cd05083 7 KLTLGEIIGEGEFGAVLQG-EYTGQKVAVKNIKCDVTAQAFLEETAVMTKL-HHKNLVRLLGVILHN-GLYIVMELMSKG 83 (254)
T ss_pred HceeeeeeccCCCCceEec-ccCCCceEEEeecCcchHHHHHHHHHHHHhC-CCCCcCeEEEEEcCC-CcEEEEECCCCC
Confidence 3889999999999999985 467889999998763 445788999988777 999999999998754 5799999999 6
Q ss_pred cHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 552 SLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
+|.+++.... ...+++..... .++.++.+||+.+++|||+|
T Consensus 84 ~L~~~l~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~ 127 (254)
T cd05083 84 NLVNFLRTRG----RALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLA 127 (254)
T ss_pred CHHHHHHhcC----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccC
Confidence 9999998642 22344444433 33489999999999887776
No 272
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.45 E-value=3.1e-13 Score=138.71 Aligned_cols=119 Identities=19% Similarity=0.161 Sum_probs=95.6
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|++.+.||+|+||.||++. ..++..||+|.++.. ..+.+.+|++++.++ +||||+++++++...+..++||||
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKA-VSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhc-CCCcHHhhhhheecCCeEEEEEee
Confidence 37788999999999999975 457899999988753 234788999999887 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhc-CCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLP-VMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~-~~iiHrDlK 596 (613)
|+ ++|.++++... ....+++..+.+++. .++.|||. .+++|||||
T Consensus 81 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~ 130 (286)
T cd06622 81 MDAGSLDKLYAGGV---ATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVK 130 (286)
T ss_pred cCCCCHHHHHHhcc---ccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCC
Confidence 99 59999887532 123455555555544 89999996 588887776
No 273
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.44 E-value=8e-13 Score=133.02 Aligned_cols=117 Identities=21% Similarity=0.253 Sum_probs=95.9
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|...+.||+|+||.||++. ..+|..+|+|.+... ..+.+.+|++++.++ +|+||+++++.+...+..++|+||
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKM-KHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhC-CCCChhhhhheeccCCeEEEEEec
Confidence 7888999999999999974 667899999998752 345788999988877 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++ ++|.+++.... ...+++.....++. .++.|||+.+++|+|+|
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~ 128 (257)
T cd08225 81 CDGGDLMKRINRQR----GVLFSEDQILSWFVQISLGLKHIHDRKILHRDIK 128 (257)
T ss_pred CCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCC
Confidence 99 59999997542 22344444444433 89999999999888887
No 274
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.44 E-value=7e-13 Score=136.71 Aligned_cols=117 Identities=25% Similarity=0.251 Sum_probs=95.9
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYLS 545 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~~LV 545 (613)
.|+..+.||+|+||.||++. ..+++.+|+|.++... ...+.+|++++.++ +||||+++++++... +..|||
T Consensus 6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKL-QHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhc-CCCCEEEEEEEEEecCCCcEEEE
Confidence 37888999999999999985 5578899999997522 22567899989888 899999999999887 899999
Q ss_pred ecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|||++++|.+++.... ..+.......++. .+|.|||..+++|||||
T Consensus 85 ~e~~~~~L~~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~ 133 (293)
T cd07843 85 MEYVEHDLKSLMETMK-----QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLK 133 (293)
T ss_pred ehhcCcCHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCC
Confidence 9999999999987642 2455555555544 89999999999888877
No 275
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.44 E-value=8.8e-13 Score=134.92 Aligned_cols=123 Identities=19% Similarity=0.063 Sum_probs=96.2
Q ss_pred ceEEEeeeEeecCceEEEEEEe-e-----CCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN-Y-----EGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~-~-----~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+.|.+.+.||+|+||.||++.. . .+..||+|.+... ....+.+|+.++.++ +|+||+++++++...+..
T Consensus 6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKF-NHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEccCCCc
Confidence 3488999999999999999753 3 4678999988742 223688999988887 999999999999999999
Q ss_pred EEEecCCC-ccHHHHHHHhcCCC-ccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSF-EEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~-~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++||||++ |+|.++++..+... ....+++..+.+++. .++.|||+.+++|||||
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlk 143 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIA 143 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccc
Confidence 99999999 69999998754211 112455555555443 89999999998877666
No 276
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.44 E-value=4.8e-13 Score=135.08 Aligned_cols=122 Identities=21% Similarity=0.168 Sum_probs=99.1
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|++.+.||+|+||.||++. ..++..||+|.+.+. ..+.+.+|++.+.++ +||||+++++++...+..++|+|
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL-NHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhC-CCCChHHHHHhhcCCCeEEEEEe
Confidence 7889999999999999985 457899999999752 345788999999887 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCCc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
|+. ++|.+++... ..+....+..++ ++++.|||..+++|+||| ++..++.
T Consensus 81 ~~~~~~L~~~l~~~------~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~ 138 (258)
T cd05578 81 LLLGGDLRYHLSQK------VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGH 138 (258)
T ss_pred CCCCCCHHHHHHhc------CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCC
Confidence 999 5999999753 234444444443 389999999999888887 5555554
No 277
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.44 E-value=9.9e-13 Score=133.56 Aligned_cols=117 Identities=21% Similarity=0.133 Sum_probs=92.6
Q ss_pred eEEEeeeEeecCceEEEEEEe-eCCc---EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN-YEGR---SVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~-~~g~---~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
.|...+.||+|+||.||++.. .++. .+|+|.++.. ..+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQF-SHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEccCCCcEEE
Confidence 478889999999999999753 3333 7999998753 234688999888777 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|||++ |+|.++++... ..++......++ ..++.|||+.+++|||+|
T Consensus 85 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlk 134 (268)
T cd05063 85 TEYMENGALDKYLRDHD-----GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLA 134 (268)
T ss_pred EEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 99999 69999997632 233444444333 389999999998887776
No 278
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.44 E-value=1.6e-12 Score=131.05 Aligned_cols=117 Identities=21% Similarity=0.283 Sum_probs=94.3
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|+..+.||+|+||.||++ ...+|+.||+|++... ..+++.+|+++++++ +||||+++++++...+..++||||
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNM-KHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhC-CCCCeeeeEeeecCCCeEEEEEec
Confidence 788999999999999997 4567899999998742 234788999999887 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++ ++|.+++.... ....+..+..+++. .++.+||+.+++|+|++
T Consensus 81 ~~~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~ 128 (256)
T cd08218 81 CEGGDLYKKINAQR----GVLFPEDQILDWFVQICLALKHVHDRKILHRDIK 128 (256)
T ss_pred CCCCcHHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence 99 59999997532 22344444444333 89999999988777666
No 279
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.44 E-value=1.3e-12 Score=135.46 Aligned_cols=116 Identities=22% Similarity=0.235 Sum_probs=96.1
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
+.|...+.||.|+||.||++ ...+++.||+|.+... ..+.+.+|+..+..+ +||||+++++++...+..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKEL-KNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhc-CCCceeeeeeeEecCceEEEEEEe
Confidence 45999999999999999997 4678999999988752 345788899888777 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
++ |+|.+++... .++...+..++ ..++.+||+.+++|||||
T Consensus 98 ~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~ 142 (296)
T cd06655 98 LAGGSLTDVVTET-------CMDEAQIAAVCRECLQALEFLHANQVIHRDIK 142 (296)
T ss_pred cCCCcHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 99 6999988642 24445554443 389999999999888877
No 280
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.44 E-value=3.2e-12 Score=133.94 Aligned_cols=128 Identities=18% Similarity=0.079 Sum_probs=102.2
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec--cchHHHHHHHHHHHhcCC----C---CcceeEEEEEEeC---
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK--THHDVALKEIQNLIASDQ----H---PNIVRWYGVESDQ--- 539 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~--~~~~~~~~Ei~~L~~l~~----H---pnIV~l~g~~~~~--- 539 (613)
.+|.+.++||-|.|++||+| .....+.||+|+.+. ...+....||.+|++.-. | .+||+|++.|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpN 157 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPN 157 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCC
Confidence 45889999999999999998 688889999999996 345678899999987622 3 3799999999854
Q ss_pred -CEEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccceecCCCcCcceeee
Q 007199 540 -DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610 (613)
Q Consensus 540 -~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlKllh~dg~PsniLlk 610 (613)
.++|||+|++.-+|..+|+.. ....+++..+..+ ++.||.|||+. +.++|.|+||+|+||-
T Consensus 158 G~HVCMVfEvLGdnLLklI~~s----~YrGlpl~~VK~I~~qvL~GLdYLH~e------cgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 158 GQHVCMVFEVLGDNLLKLIKYS----NYRGLPLSCVKEICRQVLTGLDYLHRE------CGIIHTDLKPENVLLC 222 (590)
T ss_pred CcEEEEEehhhhhHHHHHHHHh----CCCCCcHHHHHHHHHHHHHHHHHHHHh------cCccccCCCcceeeee
Confidence 489999999998999999875 4556666555444 44889998864 3456788889999883
No 281
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.44 E-value=1.2e-12 Score=131.79 Aligned_cols=115 Identities=26% Similarity=0.204 Sum_probs=93.1
Q ss_pred EEEeeeEeecCceEEEEEEe-eCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKT--------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~-~~g~~VAVK~l~~~--------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
|+..+.||+|+||+||++.. .+++.||+|.+... ..+.+.+|++++.++ +|+||+++++++...+..+++
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-QHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhc-CCCCchheeeeEecCCeEEEE
Confidence 56678999999999999854 48899999988652 234788999988887 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|||++ ++|.+++.... .+.......+ ++.++.+||+.+++|+|||
T Consensus 81 ~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 129 (258)
T cd06632 81 LELVPGGSLAKLLKKYG------SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIK 129 (258)
T ss_pred EEecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 99999 59999997532 2334343333 3489999999999888777
No 282
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.44 E-value=1e-12 Score=134.51 Aligned_cols=117 Identities=20% Similarity=0.105 Sum_probs=91.3
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCc----EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGR----SVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~----~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
+.|+..+.||+|+||+||++. ..+++ .||+|.++.. ....+.+|+.++..+ .||||+++++++.. ...+
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV-GSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc-CCCCCceEEEEEcC-CCcE
Confidence 348899999999999999984 45555 4899998752 234678899888777 99999999999975 4578
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++|||++ |+|.++++... ..+++....+++. .|+.|||+.+++|||||
T Consensus 85 l~~~~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlk 136 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENK-----DRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLA 136 (279)
T ss_pred EEEEcCCCCCHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 9999999 79999997532 2345555554444 89999999999887776
No 283
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.44 E-value=1.5e-12 Score=134.90 Aligned_cols=117 Identities=19% Similarity=0.185 Sum_probs=92.8
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-------
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQD------- 540 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~------- 540 (613)
.|...+.||+|+||.||++. ..+++.||||++.... ...+.+|++++.++ +||||+++++++...+
T Consensus 13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhC-CCCCccceEEEEecccccccCCC
Confidence 48999999999999999974 5679999999886421 22567899888777 9999999999987654
Q ss_pred -EEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 541 -FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 -~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
..++||||++++|.+++... ...+++..+..++. .|+.|||+.+++|+|||
T Consensus 92 ~~~~lv~e~~~~~l~~~l~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~ 146 (310)
T cd07865 92 GSFYLVFEFCEHDLAGLLSNK-----NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMK 146 (310)
T ss_pred ceEEEEEcCCCcCHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCC
Confidence 45999999999999888753 22345555554443 89999999999887776
No 284
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.44 E-value=9.5e-13 Score=138.59 Aligned_cols=119 Identities=18% Similarity=0.153 Sum_probs=95.0
Q ss_pred ccCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEe-CCEE
Q 007199 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESD-QDFV 542 (613)
Q Consensus 470 ~i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~-~~~~ 542 (613)
.+.+.|...+.||+|+||.||++. ..+++.||+|++.+. ..+.+.+|++++.++ +||||++++++|.. .+..
T Consensus 7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHL-RHENIISLSDIFISPLEDI 85 (328)
T ss_pred ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhc-CCCCeeeEeeeEecCCCcE
Confidence 355669999999999999999974 678999999988642 234678899999888 99999999999876 4578
Q ss_pred EEEecCCCccHHHHHHHhcCCCccccCCHH---HHHHHHHHHHHHHhcCCceeeccc
Q 007199 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKE---QDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~---~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+++|||+.++|.++++.. .++.. .+...++.++.|||+.+++|||+|
T Consensus 86 ~lv~e~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~ 135 (328)
T cd07856 86 YFVTELLGTDLHRLLTSR-------PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLK 135 (328)
T ss_pred EEEeehhccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 999999988999888642 12322 333444489999999999888877
No 285
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.43 E-value=7.1e-13 Score=139.62 Aligned_cols=117 Identities=18% Similarity=0.185 Sum_probs=93.7
Q ss_pred ceEE-EeeeEeecCceEEEEEE-eeCCcEEEEEEeeccch-----------------HHHHHHHHHHHhcCCCCcceeEE
Q 007199 473 KLVV-FNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH-----------------DVALKEIQNLIASDQHPNIVRWY 533 (613)
Q Consensus 473 ~~~~-~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~-----------------~~~~~Ei~~L~~l~~HpnIV~l~ 533 (613)
++|. +.+.||+|+||+||++. ..+++.||||.++.... ..+.+|++++.++ +||||++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~ 86 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEI-KHENIMGLV 86 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhC-CCcceeeee
Confidence 3343 56789999999999985 56789999998875211 1477899989887 999999999
Q ss_pred EEEEeCCEEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 534 GVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 534 g~~~~~~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
+++...+..+++|||+.|+|.+++.... .+++.....++ +.++.+||..+++|+|||
T Consensus 87 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~ 146 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMASDLKKVVDRKI------RLTESQVKCILLQILNGLNVLHKWYFMHRDLS 146 (335)
T ss_pred EEEecCCcEEEEEeccccCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 9999999999999999999999997532 34444444443 389999999999888887
No 286
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.43 E-value=9.9e-13 Score=138.75 Aligned_cols=118 Identities=20% Similarity=0.187 Sum_probs=94.2
Q ss_pred cCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-----
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD----- 540 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~----- 540 (613)
+++.|.+.+.||+|+||.||++ ...+|+.||+|.+... ....+.+|++++.++ +||||+++++++....
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRF-KHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhC-CCCCcCchhheeecccccccc
Confidence 3456999999999999999997 4678999999998742 234678899988888 9999999999876543
Q ss_pred EEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 ~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
..|+++||++++|.+++... .+++..+..++. .+|.+||+.+++|||||
T Consensus 82 ~~~lv~e~~~~~l~~~~~~~-------~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlk 133 (336)
T cd07849 82 DVYIVQELMETDLYKLIKTQ-------HLSNDHIQYFLYQILRGLKYIHSANVLHRDLK 133 (336)
T ss_pred eEEEEehhcccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 58999999999998888642 344555444443 89999999999888777
No 287
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.43 E-value=2.3e-12 Score=130.29 Aligned_cols=119 Identities=21% Similarity=0.151 Sum_probs=97.0
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|++.+.||+|+||+||++. ..++..+|+|++... ..+.+.+|++.|..+ +|+||+++++.+...+..+++||+
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQC-NHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhc-CCCCEEEEEEEEeeCCEEEEEEec
Confidence 48889999999999999985 557889999998752 345788999988777 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
++ ++|.++++... ....+.+..+..++ ..++.+||+.+++|||+|
T Consensus 81 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~ 129 (267)
T cd06610 81 LSGGSLLDIMKSSY---PRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIK 129 (267)
T ss_pred cCCCcHHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 99 59999998642 12334544444443 389999999999988887
No 288
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.43 E-value=1e-12 Score=135.97 Aligned_cols=118 Identities=21% Similarity=0.173 Sum_probs=94.7
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC------
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD------ 540 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~------ 540 (613)
+.|++.+.||+|+||.||++. ..+|+.||+|+++.. ....+.+|++++.++ +||||+++++++...+
T Consensus 7 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l-~h~~i~~~~~~~~~~~~~~~~~ 85 (302)
T cd07864 7 DKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQL-NHRNIVNLKEIVTDKQDALDFK 85 (302)
T ss_pred hhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhC-CCCCeeeeeheecCcchhhhcc
Confidence 448889999999999999975 567899999999752 223677899888888 9999999999988655
Q ss_pred ----EEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 541 ----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 ----~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
..++|+||++|+|.+++... ...+....+..++. .||.|||..+++|||+|
T Consensus 86 ~~~~~~~lv~e~~~~~l~~~l~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~ 143 (302)
T cd07864 86 KDKGAFYLVFEYMDHDLMGLLESG-----LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIK 143 (302)
T ss_pred ccCCcEEEEEcccCccHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 79999999999888887642 22355555555444 89999999999888887
No 289
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.43 E-value=1.1e-12 Score=137.30 Aligned_cols=120 Identities=23% Similarity=0.257 Sum_probs=95.6
Q ss_pred cCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
+.+.|...+.||+|+||.||++. ..++..+|+|++... ....+.+|++++.++ +|||++++++++...+..+
T Consensus 23 ~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~ 101 (317)
T cd06635 23 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRI-KHPNSIEYKGCYLREHTAW 101 (317)
T ss_pred chhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhC-CCCCEEEEEEEEeeCCeEE
Confidence 33447888899999999999975 567899999998742 123678899999887 9999999999999999999
Q ss_pred EEecCCCccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
+||||++|+|.+++.... ..++...+..+ ++.++.|||..+++|||||
T Consensus 102 lv~e~~~g~l~~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~ 152 (317)
T cd06635 102 LVMEYCLGSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIK 152 (317)
T ss_pred EEEeCCCCCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 999999999988886532 23444444443 3389999999998877766
No 290
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.43 E-value=1.3e-12 Score=132.43 Aligned_cols=115 Identities=26% Similarity=0.220 Sum_probs=92.3
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc------------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------------HDVALKEIQNLIASDQHPNIVRWYGVESDQDF 541 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~------------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~ 541 (613)
|.+...||+|+||.||++. ..+++.+|+|.+.... .+.+.+|++++.++ +||||+++++++...+.
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKEL-QHENIVQYLGSSLDADH 80 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhc-CCCCeeeEEEEEEeCCc
Confidence 5667899999999999974 5678899999886421 13578899989888 99999999999999999
Q ss_pred EEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 542 VYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 542 ~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
.+++|||++ ++|.+++.... .++...+..+ +..++.+||+.+++|||||
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~ 133 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG------AFEETLVRNFVRQILKGLNYLHNRGIIHRDIK 133 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence 999999999 59999997542 2344443333 3389999999999887776
No 291
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.43 E-value=6.4e-13 Score=136.46 Aligned_cols=115 Identities=19% Similarity=0.161 Sum_probs=93.5
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
|++.+.||+|+||+||++. ..+|+.||+|.+... ..+.+.+|++++..+ +||||+++++++...+..++||||+
T Consensus 7 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (284)
T cd06620 7 LETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHEC-RSPYIVSFYGAFLNENNICMCMEFM 85 (284)
T ss_pred HHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHc-CCCCcceEeeeEecCCEEEEEEecC
Confidence 7788899999999999974 567899999988753 234788999999887 9999999999999999999999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhc-CCceeeccc
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLP-VMENTKDIE 596 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~-~~iiHrDlK 596 (613)
+ |+|.+++... ..+...+...+.. .++.|||. .+++|||+|
T Consensus 86 ~~~~L~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~ 131 (284)
T cd06620 86 DCGSLDRIYKKG------GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIK 131 (284)
T ss_pred CCCCHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCC
Confidence 9 6999988753 2345555555444 78999996 577777666
No 292
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.43 E-value=7.1e-14 Score=138.79 Aligned_cols=120 Identities=19% Similarity=0.156 Sum_probs=94.6
Q ss_pred EEEeeeEeecCceEEEEEEe---eCCc--EEEEEEeecc----c-hHHHHHHHHHHHhcCCCCcceeEEEEEEe-CCEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEGN---YEGR--SVAVKRLVKT----H-HDVALKEIQNLIASDQHPNIVRWYGVESD-QDFVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~---~~g~--~VAVK~l~~~----~-~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~-~~~~~ 543 (613)
|+....||+|.||.||+|.. .+.+ .+|+|.++.+ + .....+|+..++.+ +||||+.|..+|.. +..++
T Consensus 26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl-~h~nvi~Lv~Vfl~~d~~v~ 104 (438)
T KOG0666|consen 26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLREL-KHPNVISLVKVFLSHDKKVW 104 (438)
T ss_pred hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHh-cCCcchhHHHHHhccCceEE
Confidence 78888999999999999842 2222 6899999864 2 23678999666556 99999999999988 66899
Q ss_pred EEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|++||.+-+|.+.|+.++... ...++...+..++. .|++|||++-|+|||||
T Consensus 105 l~fdYAEhDL~~II~fHr~~~-~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLK 159 (438)
T KOG0666|consen 105 LLFDYAEHDLWHIIKFHRASK-AKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLK 159 (438)
T ss_pred EEehhhhhhHHHHHHHhccch-hccCCHHHHHHHHHHHHhhhHHHhhhheeeccCC
Confidence 999999999999999886432 24566555555554 89999999999877765
No 293
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.43 E-value=1.2e-12 Score=134.19 Aligned_cols=125 Identities=22% Similarity=0.240 Sum_probs=98.5
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEe------CCEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESD------QDFVYL 544 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~------~~~~~L 544 (613)
.|++.+.||+|+||.||++. ..+++.+|+|.+... ....+..|+.++.++.+|+||+++++++.. .+..|+
T Consensus 17 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~i 96 (282)
T cd06636 17 IFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWL 96 (282)
T ss_pred hhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEE
Confidence 47888999999999999974 577899999998753 334778899888887789999999999863 457899
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+|||++ |+|.+++...+ ...+++.++..++ +.++.|||+.+++|||+| ++..++
T Consensus 97 v~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 97 VMEFCGAGSVTDLVKNTK----GNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENA 158 (282)
T ss_pred EEEeCCCCcHHHHHHHcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC
Confidence 999999 69999997642 2335555554443 389999999999888877 555444
No 294
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.43 E-value=2.2e-13 Score=131.76 Aligned_cols=121 Identities=23% Similarity=0.186 Sum_probs=101.6
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec---cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-----EEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK---THHDVALKEIQNLIASDQHPNIVRWYGVESDQD-----FVY 543 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~---~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-----~~~ 543 (613)
++|.+.+.||+|+|+.||++ +..+++.+|+|++.- +..+..++|++.-+++ +|||+++++++...+. +.|
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf-~s~~vl~l~dh~l~~~~D~~~~~y 99 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKF-NSPNVLRLVDHQLREEKDGKHEAY 99 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhh-CCcchHHHHHHHHHhhccCceeEE
Confidence 56999999999999999996 588999999999885 3455789999888777 9999999998876443 599
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCC--ceeeccc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVM--ENTKDIE 596 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~--iiHrDlK 596 (613)
|++.|.. |+|.+.+..... +...+++..+..++. .||.+||... ..|||||
T Consensus 100 ll~Pyy~~Gsl~d~i~~~k~--kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiK 156 (302)
T KOG2345|consen 100 LLLPYYKRGSLLDEIERLKI--KGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIK 156 (302)
T ss_pred EEeehhccccHHHHHHHHhh--cCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCC
Confidence 9999999 999999987653 455677777776665 9999999988 8888887
No 295
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.43 E-value=1.2e-12 Score=132.44 Aligned_cols=110 Identities=21% Similarity=0.189 Sum_probs=87.1
Q ss_pred eEeecCceEEEEEEe---eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-c
Q 007199 480 EIAKGSNGTVVLEGN---YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-C 551 (613)
Q Consensus 480 ~LG~G~fG~Vyk~~~---~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-G 551 (613)
.||+|+||.||++.. ..+..||+|.+.... .+.+.+|++++.++ +||||+++++++. .+..++||||++ |
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l-~h~~ii~~~~~~~-~~~~~lv~e~~~~~ 79 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQL-DNPYIVRMIGVCE-AEALMLVMEMASGG 79 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhc-CCCCeEEEEEEEc-CCCeEEEEEeCCCC
Confidence 489999999999742 345679999987532 34688999999887 9999999999885 457899999999 6
Q ss_pred cHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 552 SLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+|.+++... ...+++..+.+++. .++.|||..+++|||||
T Consensus 80 ~L~~~l~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 122 (257)
T cd05115 80 PLNKFLSGK-----KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLA 122 (257)
T ss_pred CHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccc
Confidence 999999753 23456666655554 89999999999887776
No 296
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.43 E-value=1.2e-12 Score=126.56 Aligned_cols=152 Identities=14% Similarity=0.119 Sum_probs=127.6
Q ss_pred CCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHHHhh
Q 007199 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIR 127 (613)
Q Consensus 48 ~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~v~ 127 (613)
..+||.|+-.|.+-|||+.||+++|.-..|..|-.+.- ..++.+++++- .|.||.++.+||.+ .|.|.+.+-|.
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~----vvgdfVV~GCy-~g~lYfl~~~tGs~-~w~f~~~~~vk 96 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAI----VVGDFVVLGCY-SGGLYFLCVKTGSQ-IWNFVILETVK 96 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeE----EECCEEEEEEc-cCcEEEEEecchhh-eeeeeehhhhc
Confidence 47899999999999999999999999988988887721 12234555555 99999999999999 99999999999
Q ss_pred hCceeec-CCcEEEEeecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccccccccEEEE
Q 007199 128 RMPYISK-DGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYI 206 (613)
Q Consensus 128 ~sP~~~~-dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i 206 (613)
.+|...- .|.+|.||.|+++||||++|-.-+|+..-++.+..+|+.+. .++.+|+
T Consensus 97 ~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~------------------------g~~sly~ 152 (354)
T KOG4649|consen 97 VRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAP------------------------GDGSLYA 152 (354)
T ss_pred cceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecC------------------------CCceEEE
Confidence 9988654 46899999999999999999999999988887765664332 1458999
Q ss_pred EeeeeEEEEEeCCCC--ceEEEEEe
Q 007199 207 MRTDYVLQSTSQDSG--EVLWNVAY 229 (613)
Q Consensus 207 gr~d~~l~a~d~~~G--~~~Wn~t~ 229 (613)
..+-+.|-|+.++++ .+.|..+.
T Consensus 153 a~t~G~vlavt~~~~~~~~~w~~~~ 177 (354)
T KOG4649|consen 153 AITAGAVLAVTKNPYSSTEFWAATR 177 (354)
T ss_pred EeccceEEEEccCCCCcceehhhhc
Confidence 999999999999998 78887654
No 297
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.43 E-value=9.4e-13 Score=135.75 Aligned_cols=122 Identities=20% Similarity=0.143 Sum_probs=94.7
Q ss_pred eEEEeeeEeecCceEEEEEEee-----------------CCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNY-----------------EGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRW 532 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~-----------------~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l 532 (613)
.|.+.+.||+|+||.||++... .+..||+|.+... ..+.+.+|++++.++ +||||+++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~ 84 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRL-SDPNIARL 84 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhc-CCCCEeEE
Confidence 4788999999999999986421 2346899998863 244788999999888 99999999
Q ss_pred EEEEEeCCEEEEEecCCC-ccHHHHHHHhcCCC-----ccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 533 YGVESDQDFVYLSLERCT-CSLNDLIYVLSGSF-----EEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 533 ~g~~~~~~~~~LV~E~~~-GsL~~~L~~~~~~~-----~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++++...+..+++|||++ ++|.+++....... ....++...+..++. .++.|||+.+++|||||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlk 157 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLA 157 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 999999999999999999 69999998643100 112355555554443 89999999999887776
No 298
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.43 E-value=1.9e-12 Score=134.67 Aligned_cols=118 Identities=24% Similarity=0.268 Sum_probs=94.0
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYL 544 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~~L 544 (613)
+.|+..+.||+|+||.||++. ..+|+.||+|.++... ...+.+|++++.++ +|+||+++++++... +..++
T Consensus 7 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 7 TEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNL-RHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred cceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhC-CCCCCcceEEEEecCCCCeEEE
Confidence 348999999999999999984 5679999999987532 12467899999887 999999999998765 57899
Q ss_pred EecCCCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
||||+.++|.+++.... ..++...+..++ ..++.|||+.+++|||||
T Consensus 86 v~e~~~~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 135 (309)
T cd07845 86 VMEYCEQDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLK 135 (309)
T ss_pred EEecCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 99999999999987632 234444444443 389999999999887777
No 299
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.43 E-value=7.7e-13 Score=135.61 Aligned_cols=116 Identities=19% Similarity=0.188 Sum_probs=92.6
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
|++.+.||+|+||.||++. ..++..+|+|.+.... .+.+.+|++++..+ +||||+++++++...+..++||||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASC-DHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHC-CCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 6777889999999999975 5568889999987532 34688899988887 99999999999999999999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|+|..++.... ..+++..+..++ +.+|.|||+.+++|||||
T Consensus 86 ~~~l~~~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlk 130 (282)
T cd06643 86 GGAVDAVMLELE-----RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLK 130 (282)
T ss_pred CCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence 69988876522 234444444433 389999999998877666
No 300
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.43 E-value=9.5e-13 Score=134.97 Aligned_cols=122 Identities=22% Similarity=0.232 Sum_probs=94.7
Q ss_pred eEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
.+...++||+|+||.||++.. .++..+|+|.+... ..+.+.+|++++..+ +|+||+++++++...+..++
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 6 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVL-QHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred hceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcC-CCCCCceEEEEEecCCceEE
Confidence 378889999999999999742 34568999988763 234789999988877 99999999999999999999
Q ss_pred EecCCC-ccHHHHHHHhcCC---------CccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSGS---------FEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~---------~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+|||++ |+|.++++..... .....+++..+..++. .++.|||+.+++|||||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlk 149 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLA 149 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 999999 6999999864310 0012344444444333 89999999998887776
No 301
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.42 E-value=6e-13 Score=140.74 Aligned_cols=88 Identities=23% Similarity=0.345 Sum_probs=72.0
Q ss_pred ceEEEeeeEeecCceEEEEEE------eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC-CE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG------NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ-DF 541 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~------~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~-~~ 541 (613)
++|++.+.||+|+||.||++. ..+++.||+|+++.. ..+.+.+|++++.++.+|+||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 348899999999999999973 234578999998752 2346778999998887899999999988754 57
Q ss_pred EEEEecCCC-ccHHHHHHHh
Q 007199 542 VYLSLERCT-CSLNDLIYVL 560 (613)
Q Consensus 542 ~~LV~E~~~-GsL~~~L~~~ 560 (613)
++++|||++ |+|.++|...
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~ 106 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSK 106 (337)
T ss_pred EEEEEecCCCCCHHHHHHhc
Confidence 899999999 6999999754
No 302
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.42 E-value=1.3e-12 Score=133.77 Aligned_cols=122 Identities=20% Similarity=0.160 Sum_probs=93.6
Q ss_pred eEEEeeeEeecCceEEEEEEee------CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~------~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
.|++.+.||+|+||.||++... ....||+|.+.... .+.+.+|++.+.++ +||||+++++++...+..+
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDL-QHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhc-CCcccceEEEEEcCCCceE
Confidence 3788899999999999997532 22579999987532 34688999999887 9999999999999999999
Q ss_pred EEecCCC-ccHHHHHHHhcCCCc----------cccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFE----------EQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~----------~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
++|||++ |+|.+++........ ...++...+..++ +.++.|||..+++|||||
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlk 151 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLA 151 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 9999999 699999986431100 1234444444433 389999999998877666
No 303
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.42 E-value=1.2e-12 Score=139.16 Aligned_cols=123 Identities=24% Similarity=0.219 Sum_probs=96.2
Q ss_pred cCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC-----
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ----- 539 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~----- 539 (613)
+.+.|+..+.||+|+||.||++. ..+++.||+|++.+. ..+.+.+|+.++.++ +||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLV-NHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhc-CCCCCcceeeeeccCCCccc
Confidence 44669999999999999999974 678999999998742 234677899888777 999999999998654
Q ss_pred -CEEEEEecCCCccHHHHHHHhcCCCccccCCHHHH---HHHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 540 -DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQD---SNLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 540 -~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~---~~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
...|+|||||.|+|.+.+... ++...+ ...++.||.|||..+++||||| ++..++
T Consensus 93 ~~~~~lv~e~~~~~l~~~~~~~--------l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~ 155 (353)
T cd07850 93 FQDVYLVMELMDANLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 155 (353)
T ss_pred cCcEEEEEeccCCCHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence 357999999999999888642 333333 3344489999999999888887 555544
No 304
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.42 E-value=7.1e-13 Score=139.74 Aligned_cols=124 Identities=19% Similarity=0.195 Sum_probs=97.9
Q ss_pred CceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEe----CCE
Q 007199 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESD----QDF 541 (613)
Q Consensus 472 ~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~----~~~ 541 (613)
+..|+..+.||+|+||.||++. ..+|+.||+|++... ..+.+.+|+.+|.++ +||||+++++++.. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHF-KHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhc-CCCCccCHHHhccccCCCCce
Confidence 3558999999999999999974 677999999998753 234677899988887 89999999998763 347
Q ss_pred EEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 542 ~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
.++||||+.|+|.+++... ..+++..+..++. .||.|||..+++||||| ++..++
T Consensus 83 ~~lv~e~~~~~l~~~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~ 144 (334)
T cd07855 83 VYVVMDLMESDLHHIIHSD------QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC 144 (334)
T ss_pred EEEEEehhhhhHHHHhccC------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence 8999999999999998743 2355555544443 89999999999888887 555554
No 305
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=1.1e-13 Score=138.11 Aligned_cols=124 Identities=21% Similarity=0.152 Sum_probs=102.6
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|.+.++||+|.||+|.++ .+.+++.+|+|+++++ ....-..|-++|... +||.+..|.-.|+.++.+|+|
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~-~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNC-RHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhc-cCcHHHHhhhhhccCceEEEE
Confidence 45889999999999999997 5889999999999873 222445778888888 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCCc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
|||+. |.|+-+|.+.+ .+.++....+- +.||.|||+++|+.||+| +|++|||
T Consensus 247 MeyanGGeLf~HLsrer------~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGH 306 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER------VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGH 306 (516)
T ss_pred EEEccCceEeeehhhhh------cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCc
Confidence 99999 69999888654 34444333332 279999999999999999 7889886
No 306
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.42 E-value=1.8e-12 Score=133.65 Aligned_cols=121 Identities=23% Similarity=0.262 Sum_probs=94.8
Q ss_pred EEEeeeEeecCceEEEEEEe------eCCcEEEEEEeeccc---hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTH---HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
|.+.+.||+|+||.||++.. .++..+|+|.+.... .+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 85 (291)
T cd05094 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNL-QHEHIVKFYGVCGDGDPLIMV 85 (291)
T ss_pred eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCceEEE
Confidence 78889999999999999742 345679999987633 34788999999887 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCC----------CccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGS----------FEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~----------~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|||++ |+|.+++..+... .....+++.....++. .++.|||..+++|||||
T Consensus 86 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlk 150 (291)
T cd05094 86 FEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLA 150 (291)
T ss_pred EecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccC
Confidence 99999 6999999864310 0112344444444443 89999999999887776
No 307
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.42 E-value=1.7e-12 Score=136.93 Aligned_cols=124 Identities=17% Similarity=0.187 Sum_probs=93.5
Q ss_pred ceEEEeeeEeecCceEEEEEEe-e-------CCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN-Y-------EGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~-~-------~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~ 540 (613)
..|.+.+.||+|+||.||++.. . .+..||+|.++.. ..+.+.+|++++.++.+||||++++++|...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 3489999999999999999742 1 2236899988752 23478899998887768999999999999999
Q ss_pred EEEEEecCCC-ccHHHHHHHhcCC----------CccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 541 FVYLSLERCT-CSLNDLIYVLSGS----------FEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 ~~~LV~E~~~-GsL~~~L~~~~~~----------~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
..+++|||++ |+|.+++...+.. .....+....... .++.++.|||..+++|||||
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlk 161 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLA 161 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccc
Confidence 9999999999 6999999864210 0112233333333 34489999999998877666
No 308
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.42 E-value=1.4e-12 Score=131.05 Aligned_cols=117 Identities=24% Similarity=0.209 Sum_probs=92.8
Q ss_pred eeEeecCceEEEEEEee-C---CcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 479 KEIAKGSNGTVVLEGNY-E---GRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~-~---g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
+.||+|+||.||++... . +..||+|.+.... .+.+.+|++.+..+ +|+||+++++++......+++|||++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~ 79 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL-GHPNVVRLLGVCTEEEPLYLVLEYME 79 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhc-CCCChheeeeeecCCCceEEEEEecc
Confidence 46899999999998543 3 7889999998632 45788999999887 89999999999999999999999998
Q ss_pred -ccHHHHHHHhcCC---CccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGS---FEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~---~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++...... .....+++.....++. .++.+||+.+++|||||
T Consensus 80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~ 132 (262)
T cd00192 80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLA 132 (262)
T ss_pred CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccC
Confidence 6999999864210 0024455555555554 89999999999887776
No 309
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.42 E-value=1.9e-12 Score=130.45 Aligned_cols=119 Identities=24% Similarity=0.281 Sum_probs=91.7
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEe--CCEEEEEe
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESD--QDFVYLSL 546 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~--~~~~~LV~ 546 (613)
|++.+.||+|+||.||++ ...+++.||+|++... ..+.+.+|++++.++ +||||+++++++.. ....+++|
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-KHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhc-CCCccceeeeeeecCCCCEEEEEe
Confidence 678899999999999997 4678899999998742 234678899988887 99999999998864 34689999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHh-----cCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLL-----PVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh-----~~~iiHrDlK 596 (613)
||++ |+|.+++...+. ....++...+..++. .++.+|| ..+++|+|||
T Consensus 81 e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~ 137 (265)
T cd08217 81 EYCEGGDLAQLIQKCKK--ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLK 137 (265)
T ss_pred hhccCCCHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCC
Confidence 9999 699999986431 233455555444433 8999999 6667666555
No 310
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.42 E-value=2.7e-12 Score=129.22 Aligned_cols=117 Identities=22% Similarity=0.273 Sum_probs=92.0
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC-CEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ-DFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~-~~~~LV~E 547 (613)
|++.+.||+|+||.||++. ..+++.||+|++... ..+.+.+|++++.++ +|+|++++++.+... ...|++||
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQL-KHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhC-CCCCeeeeeeeecCCCCEEEEEec
Confidence 7889999999999999974 567889999998752 234678899888777 999999999987654 46899999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|++ ++|.+++.... ...+++..+..++. .++.+||+.+++|||||
T Consensus 81 ~~~~~~l~~~l~~~~----~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~ 129 (257)
T cd08223 81 FCEGGDLYHKLKEQK----GKLLPENQVVEWFVQIAMALQYLHEKHILHRDLK 129 (257)
T ss_pred ccCCCcHHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 999 69999998642 22345555544443 89999999998776665
No 311
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.42 E-value=8.2e-13 Score=135.37 Aligned_cols=116 Identities=22% Similarity=0.172 Sum_probs=93.1
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
.|+..+.||+|+||.||++. ..+++.||+|++... ..+.+.+|++++..+ +||||+++++++...+..++|||
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQL-RHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhc-CCcchhhHHHhcccCCeEEEEEe
Confidence 48889999999999999975 456899999988652 234678999988887 99999999999999999999999
Q ss_pred CCCc-cHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 548 RCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|++| +|.++.... ..+....+..++. .++.|||+.+++|+|++
T Consensus 81 ~~~~~~l~~~~~~~------~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~ 127 (286)
T cd07846 81 FVDHTVLDDLEKYP------NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIK 127 (286)
T ss_pred cCCccHHHHHHhcc------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence 9995 777665532 2244555544443 89999999999888877
No 312
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.42 E-value=1.9e-12 Score=132.73 Aligned_cols=117 Identities=20% Similarity=0.168 Sum_probs=92.5
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~-----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
.|+..+.||+|+||.||++. ..+++.||+|+++. ...+.+.+|++++.++ +|+||+++++++...+..+++||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQL-RHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhc-CCCCeeehhheEEECCEEEEEEe
Confidence 48899999999999999974 55788999998874 2345788999999888 89999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|+++++.+.+... ...+....+..+ ++.++.|||..+++|||++
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~ 127 (288)
T cd07833 81 YVERTLLELLEAS-----PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIK 127 (288)
T ss_pred cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 9996444444332 122444444444 3389999999999888887
No 313
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.42 E-value=7.9e-14 Score=153.10 Aligned_cols=118 Identities=20% Similarity=0.155 Sum_probs=92.4
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCc----EEEEEEeec----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGR----SVAVKRLVK----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~----~VAVK~l~~----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
....++||+|+||+||++. ..+|+ +||+|.+.. +..+++..|+-+|.++ +||||+||+++|.... +.||
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masl-dHpnl~RLLgvc~~s~-~qlv 775 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASL-DHPNLLRLLGVCMLST-LQLV 775 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcC-CCchHHHHhhhcccch-HHHH
Confidence 4557899999999999974 44443 699998875 3456899999888887 9999999999998776 8899
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++||+ |+|.++++.++..... ...+.|...+. .||.|||.+..+||||-
T Consensus 776 tq~mP~G~LlDyvr~hr~~igs-q~lLnw~~QIA-kgM~YLe~qrlVHrdLa 825 (1177)
T KOG1025|consen 776 TQLMPLGCLLDYVREHRDNIGS-QDLLNWCYQIA-KGMKYLEEQRLVHRDLA 825 (1177)
T ss_pred HHhcccchHHHHHHHhhccccH-HHHHHHHHHHH-HHHHHHHhcchhhhhhh
Confidence 99999 8999999987643222 12234433333 89999999999888874
No 314
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.42 E-value=2.6e-12 Score=130.54 Aligned_cols=116 Identities=24% Similarity=0.194 Sum_probs=92.1
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT--------HHDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFV 542 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~--------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~ 542 (613)
.|...+.||+|+||.||++. ..+++.||+|++... ..+.+.+|++++.++ +||||+++++++... ...
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNL-QHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHc-CCCCeeeEEEEEEcCCCCEE
Confidence 37888999999999999974 577899999988642 123678899999888 999999999998763 578
Q ss_pred EEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
+++|||++ ++|.+++.... .++...... .++.+|.+||+.+++|||+|
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~ 133 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLHSNMIVHRDIK 133 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence 99999999 59999997532 233443333 33489999999999988877
No 315
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.42 E-value=2.6e-12 Score=132.27 Aligned_cols=120 Identities=18% Similarity=0.225 Sum_probs=93.8
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~~LV~ 546 (613)
.|...+.||.|++|.||++. ..+++.+|+|.+... ..+.+.+|++++.++ +||||++++++|... ..+++||
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSC-KSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhC-CCCCeeeeeeEEEccCCCeEEEEE
Confidence 37889999999999999985 467889999998853 334788999999877 999999999998654 3789999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
||++ |+|.+++..... ....+++..+. ..++.++.|||..+++|+|++
T Consensus 81 e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~ 132 (287)
T cd06621 81 EYCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIK 132 (287)
T ss_pred EecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 9999 599998875321 22234444333 333489999999999888877
No 316
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.42 E-value=2.3e-12 Score=130.77 Aligned_cols=128 Identities=23% Similarity=0.272 Sum_probs=100.0
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC------EEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYGVESDQD------FVY 543 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~------~~~ 543 (613)
+.|++.+.||+|+||.||++. ..+++.+|+|.+... ..+.+.+|++++.++.+|+||+++++++.... ..+
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~ 85 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLW 85 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEE
Confidence 458999999999999999975 457889999998863 34578899999988767999999999997654 489
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+||||++ ++|.++++.... ....+....+..++ +.++.|||+.+++|+||+ ++..++
T Consensus 86 lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~ 150 (275)
T cd06608 86 LVMELCGGGSVTDLVKGLRK--KGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNA 150 (275)
T ss_pred EEEEcCCCCcHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCC
Confidence 9999999 599999876421 12345555554443 389999999999888877 555444
No 317
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.42 E-value=1.7e-12 Score=137.45 Aligned_cols=124 Identities=18% Similarity=0.149 Sum_probs=97.5
Q ss_pred cCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC----
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD---- 540 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~---- 540 (613)
+.+.|...+.||+|+||.||++. ..+++.||||++... ..+.+.+|+++|.++ +||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHM-KHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhc-CCCCccceeeeecCCccccc
Confidence 45569999999999999999974 678999999998642 223678999999888 9999999999987653
Q ss_pred --EEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 541 --FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 541 --~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
..++||||+.++|.+++... .+++..+..++. .++.|||+.+|+||||| ++..++
T Consensus 92 ~~~~~lv~e~~~~~l~~~~~~~-------~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~ 155 (343)
T cd07880 92 FHDFYLVMPFMGTDLGKLMKHE-------KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDC 155 (343)
T ss_pred cceEEEEEecCCCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 46899999978998888632 345555555443 89999999999888877 555444
No 318
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.42 E-value=1.7e-12 Score=130.57 Aligned_cols=117 Identities=22% Similarity=0.307 Sum_probs=96.9
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~-~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
.|...+.||+|+||.||++. ..+++.+|+|.+.... .+.+.+|++++.++ +||||+++++++......|+++||++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~ 82 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQC-DSPYIVKYYGSYFKNTDLWIVMEYCGA 82 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhC-CCCcEeeeeeeeecCCcEEEEEecCCC
Confidence 48888999999999999975 4458899999988633 56899999999888 99999999999999999999999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++|.+++.... ..++...+..++. .++.|||..+++|||++
T Consensus 83 ~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~ 126 (256)
T cd06612 83 GSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIK 126 (256)
T ss_pred CcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 59999997532 2344444444443 89999999999888876
No 319
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.41 E-value=1.3e-12 Score=135.17 Aligned_cols=116 Identities=22% Similarity=0.224 Sum_probs=94.5
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
+.|...+.||+|+||.||++. ..++..||+|.+... ..+.+.+|+.++.++ +||||+++++++...+..|+|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN-KHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc-CCCCeeehhheeeeCCcEEEEEec
Confidence 348889999999999999974 567889999998642 334788999888777 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHH---HHHHHHHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQ---DSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~---~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++ |+|.+++... .++... +...++.++.+||+.+++|||+|
T Consensus 98 ~~~~~L~~~~~~~-------~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~ 142 (293)
T cd06647 98 LAGGSLTDVVTET-------CMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 142 (293)
T ss_pred CCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCC
Confidence 99 6999998753 123333 33344489999999999888877
No 320
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.41 E-value=1.4e-12 Score=138.10 Aligned_cols=113 Identities=15% Similarity=0.008 Sum_probs=83.5
Q ss_pred cccCceEEEeeeEeecCceEEEEEE-ee-CCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCccee-EEEEEE
Q 007199 469 RRIGKLVVFNKEIAKGSNGTVVLEG-NY-EGRSVAVKRLVKT--------HHDVALKEIQNLIASDQHPNIVR-WYGVES 537 (613)
Q Consensus 469 ~~i~~~~~~~~~LG~G~fG~Vyk~~-~~-~g~~VAVK~l~~~--------~~~~~~~Ei~~L~~l~~HpnIV~-l~g~~~ 537 (613)
..+...|...+.||+|+||+||+|. .. +++.||||++... ..+.+.+|+++|.++ +|+|++. ++.
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L-~h~~iv~~l~~--- 89 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTV-RGIGVVPQLLA--- 89 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhc-cCCCCCcEEEE---
Confidence 3444569999999999999999985 33 6788899986532 134689999999888 9999985 443
Q ss_pred eCCEEEEEecCCCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeecc-c
Q 007199 538 DQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDI-E 596 (613)
Q Consensus 538 ~~~~~~LV~E~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDl-K 596 (613)
.+..|||||||+| +|.. +.. .. ... ....++.++.|||+.+|+|||| |
T Consensus 90 -~~~~~LVmE~~~G~~L~~-~~~------~~--~~~-~~~~i~~aL~~lH~~gIiHrDL~K 139 (365)
T PRK09188 90 -TGKDGLVRGWTEGVPLHL-ARP------HG--DPA-WFRSAHRALRDLHRAGITHNDLAK 139 (365)
T ss_pred -cCCcEEEEEccCCCCHHH-hCc------cc--hHH-HHHHHHHHHHHHHHCCCeeCCCCC
Confidence 2468999999995 8862 211 11 122 3445559999999999998888 6
No 321
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.41 E-value=2.3e-12 Score=130.24 Aligned_cols=115 Identities=25% Similarity=0.275 Sum_probs=94.9
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|+..+.||+|+||.||++. ..+++.||+|.++.. ..+.+.+|++++.++ +|+||+++++++...+..++|+||
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-KHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhC-CCCChhheeeeEecCCEEEEEEec
Confidence 7788999999999999975 567899999998863 334788999999888 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
++ ++|.+++.... ...+....+ .++.++.+||+.+++|+|||
T Consensus 81 ~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~ 126 (264)
T cd06626 81 CSGGTLEELLEHGR------ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIK 126 (264)
T ss_pred CCCCcHHHHHhhcC------CCChHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 99 69999997532 233334333 33489999999999888887
No 322
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.41 E-value=2.1e-12 Score=132.18 Aligned_cols=111 Identities=21% Similarity=0.113 Sum_probs=89.5
Q ss_pred EeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-cc
Q 007199 481 IAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CS 552 (613)
Q Consensus 481 LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-Gs 552 (613)
||+|+||+||++. ..+|+.+|+|.+... ....+.+|+++|..+ +||||+++++.+...+..|+||||++ |+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKV-SSRFIVSLAYAFETKDDLCLVMTLMNGGD 79 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhC-CCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence 6899999999974 667899999998752 233567899888777 99999999999999999999999999 69
Q ss_pred HHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 553 LNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 553 L~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|.+++.... ...+++..+..+ ++.++.|||..+++|||||
T Consensus 80 L~~~l~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~ 122 (277)
T cd05577 80 LKYHIYNVG----EPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLK 122 (277)
T ss_pred HHHHHHHcC----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 999998642 123455544433 3489999999999888877
No 323
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.41 E-value=1.4e-12 Score=133.47 Aligned_cols=117 Identities=21% Similarity=0.192 Sum_probs=95.3
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|+..+.||+|++|.||++. ..+|..||+|++... ..+.+.+|++.+.++ +||||+++++++...+..|++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKEL-NHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhc-CCCCccCHhheeccCCeEEEEEec
Confidence 4567889999999999974 568999999998742 234688899999887 999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++++|.+++.... ...+.+.....++. .+|.|||+.+++|||++
T Consensus 80 ~~~~l~~~~~~~~----~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~ 126 (283)
T cd07835 80 LDLDLKKYMDSSP----LTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLK 126 (283)
T ss_pred cCcCHHHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCC
Confidence 9989999997642 12355555554433 89999999999888777
No 324
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.41 E-value=1.2e-12 Score=132.18 Aligned_cols=109 Identities=23% Similarity=0.225 Sum_probs=86.6
Q ss_pred eEeecCceEEEEEE---eeCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 480 EIAKGSNGTVVLEG---NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 480 ~LG~G~fG~Vyk~~---~~~g~~VAVK~l~~~~-----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
+||+|+||.||++. ..++..+|+|+++... .+++.+|+.++..+ +||||+++++++. .+..++||||++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~-~~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQL-DNPYIVRMIGICE-AESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhC-CCCCcceEEEEEc-CCCcEEEEecCCC
Confidence 68999999999973 3567889999987532 34788999888777 9999999999885 456789999999
Q ss_pred ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++.... .+++.+..+++. .++.+||..+++|||||
T Consensus 80 ~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlk 122 (257)
T cd05116 80 GPLNKFLQKNK------HVTEKNITELVHQVSMGMKYLEETNFVHRDLA 122 (257)
T ss_pred CcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCEeecccc
Confidence 79999997532 345555555444 89999999998887776
No 325
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.41 E-value=2.3e-12 Score=136.69 Aligned_cols=118 Identities=19% Similarity=0.199 Sum_probs=93.3
Q ss_pred cCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC-----
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ----- 539 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~----- 539 (613)
+.+.|...+.||+|+||.||++. ..+++.||+|++... ..+.+.+|++++.++ +||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~iv~~~~~~~~~~~~~~ 93 (345)
T cd07877 15 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM-KHENVIGLLDVFTPARSLEE 93 (345)
T ss_pred ccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHc-CCCcccceeeeeeecccccc
Confidence 44669999999999999999974 578899999998752 234677899988888 999999999988643
Q ss_pred -CEEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 540 -DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 540 -~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
...|+++|++.++|.++++.. .+.+..+..++ +.|+.|||+.+++|||||
T Consensus 94 ~~~~~lv~~~~~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlk 147 (345)
T cd07877 94 FNDVYLVTHLMGADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSADIIHRDLK 147 (345)
T ss_pred cccEEEEehhcccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCC
Confidence 347899999888998888642 24444444433 389999999999988887
No 326
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.41 E-value=2.2e-12 Score=129.53 Aligned_cols=112 Identities=23% Similarity=0.180 Sum_probs=89.7
Q ss_pred eeEeecCceEEEEEEeeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-ccH
Q 007199 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CSL 553 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-GsL 553 (613)
++||+|+||.||++....++.||+|++... ..+.+.+|++++.++ +|+||+++++++...+..++||||++ ++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQY-DHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 368999999999986555999999998863 234788999988777 99999999999999999999999999 599
Q ss_pred HHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 554 NDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 554 ~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
.+++.... ..+.......+ +..++.+||+.+++|||+|
T Consensus 80 ~~~l~~~~-----~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~ 120 (251)
T cd05041 80 LTFLRKKK-----NRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLA 120 (251)
T ss_pred HHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcC
Confidence 99997532 23344433333 3389999999998877665
No 327
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.41 E-value=1.9e-12 Score=131.65 Aligned_cols=116 Identities=21% Similarity=0.164 Sum_probs=89.6
Q ss_pred eEEEeeeEeecCceEEEEEEeeC----CcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNYE----GRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~~----g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
.|.+.+.||+|+||.||++...+ ...||+|..... ..+.+.+|++++.++ +||||+++++++.. +..++|
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 7 DITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQF-DHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhC-CCCchhceeEEEcC-CCcEEE
Confidence 37889999999999999975322 346999988753 234788999988888 99999999998875 567899
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|||++ |+|.+++.... ..+.......+ ++.++.|||..+++|||||
T Consensus 85 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~ 134 (270)
T cd05056 85 MELAPLGELRSYLQVNK-----YSLDLASLILYSYQLSTALAYLESKRFVHRDIA 134 (270)
T ss_pred EEcCCCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccC
Confidence 99999 79999997632 23444444433 3389999999988776666
No 328
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.41 E-value=4e-12 Score=128.34 Aligned_cols=116 Identities=21% Similarity=0.192 Sum_probs=96.6
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|++.+.||+|++|.||++. ..+++.||||++.... .+.+.+|++.+.++ +|+||+++++++...+..++||||
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSC-ESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEccCCeEEEEEEe
Confidence 37888999999999999985 5579999999988643 45789999999888 899999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhc-CCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLP-VMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~-~~iiHrDlK 596 (613)
++ ++|.+++... ..+++.....++ +.++.+||. .+++|||++
T Consensus 81 ~~~~~L~~~l~~~------~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~ 127 (264)
T cd06623 81 MDGGSLADLLKKV------GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIK 127 (264)
T ss_pred cCCCcHHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCC
Confidence 99 6999999853 234444444443 389999999 999887776
No 329
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.41 E-value=2.5e-14 Score=152.64 Aligned_cols=117 Identities=17% Similarity=0.160 Sum_probs=94.7
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec---cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK---THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~---~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
.+.+...||.|+||+||++. ..++...|-|.|.. +..+++.-||++|..+ .||+||+|++.|+..+.++|+.|||
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~C-dHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAEC-DHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcC-CChHHHHHHHHHhccCceEEEEeec
Confidence 36677789999999999974 66677788898875 3455889999999888 8999999999999999999999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+ |-.+..+-.. ...+.++++. ++++.||.|||+++|||||||
T Consensus 112 ~GGAVDaimlEL-----~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLK 157 (1187)
T KOG0579|consen 112 GGGAVDAIMLEL-----GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLK 157 (1187)
T ss_pred CCchHhHHHHHh-----ccccchHHHHHHHHHHHHHHHHHhhcchhhhhcc
Confidence 9 5776666543 2345555554 444499999999999999998
No 330
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.40 E-value=3.8e-12 Score=129.20 Aligned_cols=122 Identities=24% Similarity=0.236 Sum_probs=95.5
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc--------chHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT--------HHDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFV 542 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~--------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~ 542 (613)
.|.+.+.||+|+||.||++. ..+++.||+|.+... ....+.+|++++.++ +|+||+++++++... ...
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l-~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNL-RHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHc-CCCCcceEEEEEEcCCCCEE
Confidence 48899999999999999974 577999999987531 223688899999888 999999999998764 468
Q ss_pred EEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+++|||++ ++|.+++.... .+.+.++.++ ++.++.+||+.+++|||+| +++.++
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~ 143 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG------ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG 143 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC
Confidence 89999999 59999987532 2344444433 3389999999999988887 555444
No 331
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.40 E-value=7.8e-14 Score=159.98 Aligned_cols=125 Identities=28% Similarity=0.283 Sum_probs=102.3
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+++....||.|.||.||.|. ..+|...|||.++-+ ..+.+.+|+.+|..+ +|||+|++||.....+.++|.||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~l-nHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGL-NHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhc-cCccccccCceeecHHHHHHHHH
Confidence 36677889999999999974 889999999987752 233678899888777 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||. |+|.+++...+ .....-..|...++..|+.|||..+|+|||+| ||.-+|
T Consensus 1315 yC~~GsLa~ll~~gr---i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g 1371 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGR---IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG 1371 (1509)
T ss_pred HhccCcHHHHHHhcc---hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC
Confidence 999 79999998653 23333345566666699999999999999888 555555
No 332
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.40 E-value=1.1e-12 Score=134.07 Aligned_cols=115 Identities=22% Similarity=0.163 Sum_probs=92.3
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|+..+.||+|+||.||++. ..++..||+|.+.... .+.+.+|++++.++ +||||+++++++.+.+..++||||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhC-CCCCEeeEEEEEEECCEEEEEEec
Confidence 36778889999999999974 5678899999987532 34688899988877 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
++ |+|.+++... .+.......+ ++.++.++|+.+++|+||+
T Consensus 84 ~~~~~L~~~i~~~-------~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~ 128 (277)
T cd06640 84 LGGGSALDLLRAG-------PFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 128 (277)
T ss_pred CCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCC
Confidence 99 5999998642 2333333333 3389999999988777665
No 333
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.40 E-value=4.3e-14 Score=137.70 Aligned_cols=125 Identities=24% Similarity=0.326 Sum_probs=98.3
Q ss_pred EEEeeeEeecCceEEEE-EEeeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk-~~~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
++-...||.|+||+|+| .++..|+.+|||+|+.. ...++..|.+..++.-+.||||++||.+..++..+|.||+|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 55667899999999999 57899999999999963 23478888888888779999999999999999999999999
Q ss_pred CccHHHH---HHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccceecCCCcCcceee
Q 007199 550 TCSLNDL---IYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 550 ~GsL~~~---L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlKllh~dg~PsniLl 609 (613)
.-||..+ +..- ....+++..+..+.. .||.||-. .+|++|||.|||||||
T Consensus 146 d~SlDklYk~vy~v----q~~~ipE~Ilg~ItvatV~AL~yLK~------~lkiIHRDvKPSNILl 201 (361)
T KOG1006|consen 146 DISLDKLYKRVYSV----QKSRIPENILGHITVATVDALDYLKE------ELKIIHRDVKPSNILL 201 (361)
T ss_pred hhhHHHHHHHHHHH----HhccCcHhhhhheeeeehhHHHHHHH------HhhhhhccCChhheEE
Confidence 9655444 3332 345566666655544 89999865 4566777788999887
No 334
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.40 E-value=1.2e-12 Score=132.88 Aligned_cols=116 Identities=22% Similarity=0.135 Sum_probs=88.7
Q ss_pred eEeecCceEEEEEEee-------CCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 480 EIAKGSNGTVVLEGNY-------EGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 480 ~LG~G~fG~Vyk~~~~-------~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.||+|+||.||++... .++.+|+|.+... ....+.+|++++..+ +||||+++++++...+..+++|||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNF-NHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhc-CCCCeeeEeeeecCCCCeEEEEec
Confidence 6899999999997422 2257999988653 344788999998877 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCC-ccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSF-EEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~-~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++ |+|.++++...... ....+.+..+..++. .++.|||+.+++|+|+|
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~ 133 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLA 133 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 99 69999998643111 112244444444333 89999999998887777
No 335
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.40 E-value=1.8e-12 Score=136.81 Aligned_cols=118 Identities=19% Similarity=0.219 Sum_probs=94.1
Q ss_pred CceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC-----C
Q 007199 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ-----D 540 (613)
Q Consensus 472 ~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~-----~ 540 (613)
.+.|...+.||+|+||+||++. ..+++.||||.+... ....+.+|+.++..+ +|+||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHL-DHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhc-CCCCccchHHheecccccccC
Confidence 3458999999999999999974 678999999998752 233677899988877 999999999988654 3
Q ss_pred EEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 ~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
..|++|||+.++|.+++... ..+.+..+..++. .+|.|||+.+++|||||
T Consensus 83 ~~~lv~e~~~~~L~~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlk 135 (337)
T cd07858 83 DVYIVYELMDTDLHQIIRSS------QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLK 135 (337)
T ss_pred cEEEEEeCCCCCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence 58999999999999988743 2355555554443 89999999999887766
No 336
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.40 E-value=2.3e-12 Score=134.61 Aligned_cols=121 Identities=23% Similarity=0.260 Sum_probs=95.8
Q ss_pred ccCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEE
Q 007199 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFV 542 (613)
Q Consensus 470 ~i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~ 542 (613)
+..+.|...+.||+|+||+||++. ..+++.||+|++... ..+.+.+|++++..+ +|||++++++++.+.+..
T Consensus 18 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~ 96 (313)
T cd06633 18 DPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQL-KHPNTIEYKGCYLKEHTA 96 (313)
T ss_pred CHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhC-CCCCCccEEEEEEeCCEE
Confidence 334447778889999999999974 567899999998742 123678899988887 999999999999999999
Q ss_pred EEEecCCCccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|+||||+.|+|.+++.... ..++...+..+ +..++.|||..+++|||+|
T Consensus 97 ~lv~e~~~~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~ 148 (313)
T cd06633 97 WLVMEYCLGSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSHNMIHRDIK 148 (313)
T ss_pred EEEEecCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 9999999999988887532 23444444443 3389999999999887766
No 337
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.40 E-value=2.1e-12 Score=131.68 Aligned_cols=118 Identities=20% Similarity=0.224 Sum_probs=89.9
Q ss_pred eeEeecCceEEEEEEe-eCCc--EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-
Q 007199 479 KEIAKGSNGTVVLEGN-YEGR--SVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT- 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~-~~g~--~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~- 550 (613)
++||+|+||.||++.. .++. .+|+|.+... ..+.+.+|++++.++.+||||+++++++...+..+++|||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 3689999999999853 4454 4788888742 234788999999888789999999999999999999999999
Q ss_pred ccHHHHHHHhcCCC----------ccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 CSLNDLIYVLSGSF----------EEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 GsL~~~L~~~~~~~----------~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.++++..+... ....++......++. .|+.|||+.+++|||||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dik 139 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLA 139 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccc
Confidence 79999998643100 112345555554444 89999999988877666
No 338
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.40 E-value=1.6e-12 Score=133.23 Aligned_cols=116 Identities=18% Similarity=0.071 Sum_probs=86.7
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCc----EEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGR----SVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~----~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
.|+..+.||+|+||+||++. ..+++ .+|+|.+... ...++..|+..+.++ +||||+++++++. ....++
T Consensus 8 ~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l-~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 8 ELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSL-DHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcC-CCCCcceEEEEEC-CCccEE
Confidence 37888999999999999975 44555 4778877642 223667777777666 9999999999875 456788
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
++||++ |+|.++++... ..+++.....++ ..++.|||+.+++|||||
T Consensus 86 i~e~~~~gsL~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlk 136 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHR-----DSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLA 136 (279)
T ss_pred EEEeCCCCcHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHCCEeccccC
Confidence 999999 79999998642 234444433333 389999999998877766
No 339
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.40 E-value=3.1e-12 Score=130.79 Aligned_cols=122 Identities=25% Similarity=0.258 Sum_probs=97.1
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEEEEEe
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYLSL 546 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~~LV~ 546 (613)
|.+.+.||+|+||.||++. ..+++.+|+|++... ....+.+|++++.++ +|||++++++++... +..++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKL-RHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhc-cCCCeeeheeeEecCCCCcEEEEe
Confidence 4677899999999999985 556889999999864 234678899989877 899999999999988 8999999
Q ss_pred cCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||++++|.+++... ...+++..+..++. .|+.+||..+++|+||| ++..++
T Consensus 80 e~~~~~l~~~~~~~-----~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~ 137 (287)
T cd07840 80 EYMDHDLTGLLDSP-----EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG 137 (287)
T ss_pred ccccccHHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC
Confidence 99999999988753 12445555444443 89999999999888777 554444
No 340
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.40 E-value=2.7e-12 Score=124.20 Aligned_cols=184 Identities=16% Similarity=0.079 Sum_probs=147.0
Q ss_pred chhHHHHhhcCCCCCCCCCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEE
Q 007199 29 NRYVSEIYNSLLPPPLPPEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFH 108 (613)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~ 108 (613)
+-.+.++-...+..++-+.+|.|++|...|.||.++-+||+..|.|.+-+.|....+.+ .+. .+++.++.||++|++
T Consensus 44 ~~~We~ilg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d--~~~-glIycgshd~~~yal 120 (354)
T KOG4649|consen 44 NLIWEAILGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCD--FDG-GLIYCGSHDGNFYAL 120 (354)
T ss_pred cEEeehhhCceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEc--CCC-ceEEEecCCCcEEEe
Confidence 33344444444555555689999999999999999999999999999988887764442 222 466667789999999
Q ss_pred ecCCCceeeecccHHHHhhhCceeec-CCcEEEEeecceEEEEECCCC--cEEEEEecCCCCCCCCCcCCCCCccccCCC
Q 007199 109 SKRFGKMKKLSSSAEEYIRRMPYISK-DGGVTLGAMKTSVFLVDVKSG--RVVDNYVLDFSASTPGFQSDENKHVVPVDG 185 (613)
Q Consensus 109 ~~~~G~l~~~~~~~~~~v~~sP~~~~-dg~v~~Gs~~~~~~~vD~~tG--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (613)
|+++-.- .|+.+.+.-+-.||++.. |+-+|+.+..+.+.++.++++ ...|.+.-.+++.++|+ |
T Consensus 121 D~~~~~c-VykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~~~~w~~~~~~PiF~spl--------c---- 187 (354)
T KOG4649|consen 121 DPKTYGC-VYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSSTEFWAATRFGPIFASPL--------C---- 187 (354)
T ss_pred cccccce-EEecccCCceeccceecCCCceEEEEeccceEEEEccCCCCcceehhhhcCCccccCce--------e----
Confidence 9988666 888999999999999986 889999999999999999999 99999998888765553 1
Q ss_pred cccccccccccccccccEEEEEeeeeEEEEEeCCCCceEEEEEeceeeeeecccccCCCc
Q 007199 186 YEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYADFKAEFRCQEVGKSF 245 (613)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~v~igr~d~~l~a~d~~~G~~~Wn~t~~~~~a~~~~~~~~~~~ 245 (613)
....+.|+.-|+.|.++| .+|+.+| .++.=++-++.|-.+.|+
T Consensus 188 --------------v~~sv~i~~VdG~l~~f~-~sG~qvw--r~~t~GpIf~~Pc~s~Ps 230 (354)
T KOG4649|consen 188 --------------VGSSVIITTVDGVLTSFD-ESGRQVW--RPATKGPIFMEPCESRPS 230 (354)
T ss_pred --------------ccceEEEEEeccEEEEEc-CCCcEEE--eecCCCceecccccCCCc
Confidence 134789999999999999 6899999 555556666666554333
No 341
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.39 E-value=1.7e-12 Score=132.36 Aligned_cols=121 Identities=24% Similarity=0.207 Sum_probs=97.3
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
+|+..+.||.|+||.||++. ..+++.||+|.+... ..+.+.+|++++..+ +|+||+++++++......|+|+||
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC-RSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHc-CCCCeeeeeEEEEECCeEEEEEEe
Confidence 36778899999999999975 567899999998753 234688999988887 899999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
++ |+|.++++.. .++...+..++. .++.+||..+++|||++ ++..++
T Consensus 81 ~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~ 135 (274)
T cd06609 81 CGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG 135 (274)
T ss_pred eCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence 99 6999999753 334444444433 89999999999888777 555443
No 342
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.39 E-value=3.1e-13 Score=146.21 Aligned_cols=117 Identities=23% Similarity=0.257 Sum_probs=94.1
Q ss_pred eEEEeeeEeecCceEEEEEE--eeCCc--EEEEEEeec----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG--NYEGR--SVAVKRLVK----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~--~~~g~--~VAVK~l~~----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
.....++||+|+||.|+++. ...|. .||||+++. ...++|.+|+.+|.++ +|||++||||...+ ..+.||
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L-~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKL-QHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhc-cCcceeEEeeeecc-chhhHH
Confidence 36678899999999999974 34444 599999986 2456999999999888 99999999999988 788999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
||+++ |||.+.|+.. ....+...... .++..||.||..++.||||+-
T Consensus 189 ~ELaplGSLldrLrka----~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLA 239 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRKA----KKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLA 239 (1039)
T ss_pred hhhcccchHHHHHhhc----cccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Confidence 99999 8999999872 22333333333 333389999999999999986
No 343
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.39 E-value=1.7e-12 Score=131.32 Aligned_cols=116 Identities=18% Similarity=0.203 Sum_probs=95.4
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
|+..+.||+|+||.||++. ..+++.+|+|++... ..+.+.+|++++.++ +||||+++++.+...+..++++||+
T Consensus 3 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 3 LEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKC-NSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred chHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHC-CCCchhhhheeeecCCEEEEEEEec
Confidence 6777899999999999975 567899999998863 234688999999887 8999999999999999999999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhc-CCceeeccc
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLP-VMENTKDIE 596 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~-~~iiHrDlK 596 (613)
+ ++|.+++.... ..+++..+.+++. .++.+||+ .+++|+|||
T Consensus 82 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~ 128 (265)
T cd06605 82 DGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVK 128 (265)
T ss_pred CCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCC
Confidence 9 69999998642 3445555444433 89999999 898888877
No 344
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.38 E-value=3.6e-13 Score=145.16 Aligned_cols=120 Identities=21% Similarity=0.227 Sum_probs=93.5
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec-------cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCC--EE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-------THHDVALKEIQNLIASDQHPNIVRWYGVESDQD--FV 542 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~-------~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~--~~ 542 (613)
....+.++||+|+|-+||+| +..+|..||.-.++. ...+.|..|+++|+.+ +|||||++|.+|.+.. .+
T Consensus 40 Ry~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL-~H~NIirfy~SW~d~~n~~i 118 (632)
T KOG0584|consen 40 RYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSL-KHPNIIRFYDSWVDTDNKTI 118 (632)
T ss_pred ceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccC-CCCceeeeeeheecCCCcee
Confidence 33678899999999999998 578888888654442 2346899999988777 9999999999999766 48
Q ss_pred EEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcC--Cceeeccc
Q 007199 543 YLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPV--MENTKDIE 596 (613)
Q Consensus 543 ~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~--~iiHrDlK 596 (613)
.+|+|+|. |+|..|++++++ -.-.....|...++ .||+|||++ .|||||||
T Consensus 119 n~iTEL~TSGtLr~Y~kk~~~--vn~kaik~W~RQIL-kGL~yLHs~~PPIIHRDLK 172 (632)
T KOG0584|consen 119 NFITELFTSGTLREYRKKHRR--VNIKAIKSWCRQIL-KGLVYLHSQDPPIIHRDLK 172 (632)
T ss_pred eeeeecccCCcHHHHHHHhcc--CCHHHHHHHHHHHH-HHhhhhhcCCCCccccccc
Confidence 89999999 999999998863 12223345544444 899999985 57777765
No 345
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.38 E-value=3.4e-12 Score=128.19 Aligned_cols=116 Identities=20% Similarity=0.157 Sum_probs=93.2
Q ss_pred EEeeeEeecCceEEEEEEe-eC----CcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 476 VFNKEIAKGSNGTVVLEGN-YE----GRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 476 ~~~~~LG~G~fG~Vyk~~~-~~----g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
++.+.||+|+||.||++.. .. +..||+|.+... ..+.+..|++.+..+ +|+||+++++++...+..+++|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKL-DHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhc-CCCchheEEEEEcCCCeeEEEE
Confidence 4567899999999999753 33 388999999863 345788999999888 9999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
||++ ++|.+++.... ...+++.....++. .++.+||+.+++|||+|
T Consensus 81 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~ 130 (258)
T smart00219 81 EYMEGGDLLDYLRKNR----PKELSLSDLLSFALQIARGMEYLESKNFIHRDLA 130 (258)
T ss_pred eccCCCCHHHHHHhhh----hccCCHHHHHHHHHHHHHHHHHHhcCCeeecccc
Confidence 9999 59999998642 11145555544443 89999999999888876
No 346
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.38 E-value=5.8e-12 Score=129.40 Aligned_cols=126 Identities=23% Similarity=0.253 Sum_probs=101.6
Q ss_pred cCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~--~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
..+.|...+.||+|+||.||++. ..++..+|+|.+.... .+.+.+|++.+..+ +|+||+++++++...+..++++|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDC-KHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHC-CCCCeeEEEEEEEECCEEEEEEe
Confidence 34558888999999999999975 4478899999998654 56788999988877 99999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|++ ++|.+++.... ..++......++ +.++.+||+.+++|+|+| +++.++
T Consensus 96 ~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~ 153 (286)
T cd06614 96 YMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDG 153 (286)
T ss_pred ccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCC
Confidence 999 69999998642 234444444433 389999999999888877 555444
No 347
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.38 E-value=2.5e-12 Score=131.28 Aligned_cols=115 Identities=22% Similarity=0.169 Sum_probs=92.7
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcC--CCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASD--QHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~--~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|+..+.||+|+||.||++. ..+++.||+|.++.. ..+.+.+|++++.++. .|||++++++++......++|||
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e 82 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIME 82 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEe
Confidence 6777899999999999975 578899999998752 3347888998887772 49999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|++ ++|.++++.. .++...+..+ ++.++.+||..+++|+||+
T Consensus 83 ~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~ 128 (277)
T cd06917 83 YAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKVGVIHRDIK 128 (277)
T ss_pred cCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcC
Confidence 999 5999988642 3444444333 3489999999999888776
No 348
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.38 E-value=6e-13 Score=136.07 Aligned_cols=115 Identities=23% Similarity=0.156 Sum_probs=91.5
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.|+..+.||+|+||.||++. ..+++.||+|.+... ..+.+.+|++++.++ +||||+++++++...+..|+||||
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC-CCCccHhhhcccccCCceEEEEEc
Confidence 36667789999999999974 567889999998742 234688999988877 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
++ |+|.+++... .+....+..+ +..++.|||..+++|+||+
T Consensus 84 ~~~~~L~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~ 128 (277)
T cd06642 84 LGGGSALDLLKPG-------PLEETYIATILREILKGLDYLHSERKIHRDIK 128 (277)
T ss_pred cCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCC
Confidence 99 6999988642 2333443333 3389999999998776665
No 349
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.38 E-value=1.2e-12 Score=135.80 Aligned_cols=120 Identities=23% Similarity=0.245 Sum_probs=94.5
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec---cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK---THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~---~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
|.....||+|+||.||++. ..+++.||+|.+.. ...+.+.+|+.++..+ +||||+++++++...+..+++|||++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~hp~i~~~~~~~~~~~~~~iv~e~~~ 101 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY-QHQNVVEMYKSYLVGEELWVLMEFLQ 101 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC-CCCchhhhhhheeeCCeEEEEEecCC
Confidence 4455679999999999974 56789999999874 2345788999888777 99999999999999999999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
++|.+++... .+.+..+.. .++.++.+||+.+++||||| +++.++
T Consensus 102 ~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~ 154 (297)
T cd06659 102 GGALTDIVSQT-------RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG 154 (297)
T ss_pred CCCHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC
Confidence 6998877542 234444433 33489999999999888877 555544
No 350
>PRK10345 hypothetical protein; Provisional
Probab=99.38 E-value=3.9e-12 Score=124.94 Aligned_cols=112 Identities=14% Similarity=0.187 Sum_probs=83.3
Q ss_pred EEeeeEeecCceEEEEEEeeCCcEEEEEEeecc---chHHHHHHHHHHHhcC----CCCcceeEEEEEEeCC---EEE-E
Q 007199 476 VFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT---HHDVALKEIQNLIASD----QHPNIVRWYGVESDQD---FVY-L 544 (613)
Q Consensus 476 ~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~----~HpnIV~l~g~~~~~~---~~~-L 544 (613)
...+.||+|+||.||. +..++.. +||++... ..+.+.+|+.++..+. .||||+++++++.++. .++ +
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3457899999999996 6555555 69988753 4567999999998772 4799999999999874 444 7
Q ss_pred EecC--CC-ccHHHHHHHhcCCCccccCCHH--HHHHHHHHHHHHHhcCCceeeccc
Q 007199 545 SLER--CT-CSLNDLIYVLSGSFEEQLNAKE--QDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~--~~-GsL~~~L~~~~~~~~~~~~~~~--~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
|+|| +. |+|.+++... .+.+. ++.+++...+.|||+.+|+|||||
T Consensus 83 I~e~~G~~~~tL~~~l~~~-------~~~e~~~~~~~~L~~l~~yLh~~~IvhrDlK 132 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQC-------RYEEDVAQLRQLLKKLKRYLLDNRIVTMELK 132 (210)
T ss_pred EecCCCCcchhHHHHHHcc-------cccHhHHHHHHHHHHHHHHHHHCCEeecCCC
Confidence 8999 55 6999999752 12222 233333344499999999999988
No 351
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.37 E-value=4e-12 Score=128.65 Aligned_cols=109 Identities=21% Similarity=0.245 Sum_probs=88.9
Q ss_pred EeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-cc
Q 007199 481 IAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CS 552 (613)
Q Consensus 481 LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-Gs 552 (613)
||+|+||.||++. ..+++.+|+|.+.+. ..+.+.+|++++..+ +||||+++++.+.+.+..+++|||++ |+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEEC-NHPFIVKLYRTFKDKKYIYMLMEYCLGGE 79 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhC-CCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence 6899999999975 456899999998752 234688999988777 99999999999999999999999999 69
Q ss_pred HHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 553 LNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 553 L~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|.+++.... .++...+..+ ++.+++|||+.+++|+|+|
T Consensus 80 L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~ 120 (262)
T cd05572 80 LWTILRDRG------LFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120 (262)
T ss_pred HHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 999998642 2344444333 3489999999999888877
No 352
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.37 E-value=8.7e-12 Score=124.83 Aligned_cols=115 Identities=28% Similarity=0.285 Sum_probs=95.1
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeEEEEEEeC--CEEEEEe
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQ--DFVYLSL 546 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~--~~~~LV~ 546 (613)
|...+.||+|++|.||++. ..+++.|++|.+.... .+.+.+|++.+.++ +||||+++++.+... +..++++
T Consensus 2 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 2 WTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSL-QHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred ceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHc-CCCCEeeEEEEEecCCCCeEEEEE
Confidence 6778899999999999985 4578999999988643 55889999999888 999999999999988 8999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
||++ ++|.+++.... .+.......++ ..++.|||+.+++|+|++
T Consensus 81 e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~ 128 (260)
T cd06606 81 EYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIK 128 (260)
T ss_pred EecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Confidence 9998 69999998642 34444444433 389999999999888876
No 353
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.37 E-value=8e-13 Score=141.46 Aligned_cols=120 Identities=20% Similarity=0.210 Sum_probs=92.3
Q ss_pred ceEEEeeeEeecCceEEEEEE---eeCC--cEEEEEEeec----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG---NYEG--RSVAVKRLVK----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~---~~~g--~~VAVK~l~~----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
+.....++||.|.||.||++. ...| -.||||.-+. ...+.|..|..+|+.+ +|||||+|+|.|.. .+++
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnf-dHphIikLIGv~~e-~P~W 466 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNF-DHPHIIKLIGVCVE-QPMW 466 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhC-CCcchhheeeeeec-ccee
Confidence 446677889999999999973 1123 3589998775 4566899999888777 99999999999974 5899
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
||||+++ |.|..||+.++.. .....+.....+++.+|.|||+.+.+||||-
T Consensus 467 ivmEL~~~GELr~yLq~nk~s--L~l~tL~ly~~Qi~talaYLeSkrfVHRDIA 518 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDS--LPLRTLTLYCYQICTALAYLESKRFVHRDIA 518 (974)
T ss_pred EEEecccchhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHHhhchhhhhhh
Confidence 9999999 9999999985421 1112222333334489999999999999986
No 354
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.37 E-value=5.1e-12 Score=129.95 Aligned_cols=122 Identities=20% Similarity=0.131 Sum_probs=96.4
Q ss_pred EEEeeeEeecCceEEEEEE----eeCCcEEEEEEeecc-------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG----NYEGRSVAVKRLVKT-------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~----~~~g~~VAVK~l~~~-------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
|++.+.||+|+||.||++. ..+++.||||.+++. ..+.+.+|++++.++.+||||+++++.+...+..+
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~ 81 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLH 81 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEE
Confidence 6788999999999999964 346788999998752 22367889999988867999999999999999999
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
+||||++ |+|.+++.... .+.+..+.. .++.+|.+||..+++|||+| ++..++
T Consensus 82 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~ 142 (288)
T cd05583 82 LILDYVNGGELFTHLYQRE------HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG 142 (288)
T ss_pred EEEecCCCCcHHHHHhhcC------CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC
Confidence 9999999 69999987532 334444433 33489999999999888887 555544
No 355
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.37 E-value=9.5e-12 Score=124.66 Aligned_cols=115 Identities=23% Similarity=0.232 Sum_probs=95.1
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|...+.||+|++|.||++. ..+++.+|+|.+.... .+.+.+|++++.++ +|||++++++++...+..+++|||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNL-KHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhC-CCCCccEEEEEEEeCCEEEEEEec
Confidence 6788999999999999974 5678899999988643 34788999999888 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
++ ++|.+++... ..+++.....++ +.++.+||+.+++|||+|
T Consensus 81 ~~~~~L~~~~~~~------~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~ 126 (254)
T cd06627 81 AENGSLRQIIKKF------GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIK 126 (254)
T ss_pred CCCCcHHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 99 5999999753 234444444443 389999999999888877
No 356
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.37 E-value=1.5e-12 Score=134.61 Aligned_cols=115 Identities=21% Similarity=0.221 Sum_probs=92.3
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
.|.....||+|+||.||++. ..++..||||.+... ..+.+.+|+..+..+ +|+||+++++.+...+..++||||+
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l-~h~~ii~~~~~~~~~~~~~lv~e~~ 101 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDY-HHENVVDMYNSYLVGDELWVVMEFL 101 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhC-CCCcHHHHHHheecCCeEEEEEeCC
Confidence 35556789999999999974 567889999998752 334688999888777 9999999999999999999999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
+ ++|.+++... .+.+.....++. .++.|||+.+++|||||
T Consensus 102 ~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlk 145 (292)
T cd06658 102 EGGALTDIVTHT-------RMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 145 (292)
T ss_pred CCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCC
Confidence 9 5999888532 234444444433 89999999999888887
No 357
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.37 E-value=3.9e-12 Score=128.64 Aligned_cols=112 Identities=19% Similarity=0.110 Sum_probs=83.7
Q ss_pred eeEeecCceEEEEEEee----CCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEe-CCEEEEEecCC
Q 007199 479 KEIAKGSNGTVVLEGNY----EGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESD-QDFVYLSLERC 549 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~----~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~-~~~~~LV~E~~ 549 (613)
+.||+|+||.||++... ++..||+|++... ..+.+.+|+.++..+ +||||+++++++.. ++..+++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~~lv~e~~ 79 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF-SHPNVLSLLGICLPSEGSPLVVLPYM 79 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC-CCCCcceEEEEeecCCCCcEEEEecC
Confidence 46899999999997532 3457999988642 234778899888776 99999999998764 55689999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
. |+|.++++... ......... ..++.|+.|||..+++|||||
T Consensus 80 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk 125 (262)
T cd05058 80 KHGDLRNFIRSET-----HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLA 125 (262)
T ss_pred CCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence 9 79999997632 122222222 334489999999998887776
No 358
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.37 E-value=6.4e-12 Score=129.01 Aligned_cols=111 Identities=18% Similarity=0.085 Sum_probs=83.8
Q ss_pred eEeecCceEEEEEE-eeCCcEEEEEEeeccc------hHHHHHHHHHHH--hcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 480 EIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH------HDVALKEIQNLI--ASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 480 ~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~------~~~~~~Ei~~L~--~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
.||+|+||.||++. ..+++.+|+|.+.+.. ...+.+|...+. ...+||||+.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 48999999999974 5678999999887521 123344443222 22479999999999999999999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++..+. .+++..+..++. .|+.|||+.+++|||||
T Consensus 81 ~~~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~~ivH~dik 124 (279)
T cd05633 81 GGDLHYHLSQHG------VFSEKEMRFYATEIILGLEHMHNRFVVYRDLK 124 (279)
T ss_pred CCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCC
Confidence 69999987532 355555555443 89999999999887777
No 359
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.37 E-value=4.9e-12 Score=131.14 Aligned_cols=124 Identities=23% Similarity=0.210 Sum_probs=97.1
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC------
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD------ 540 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~------ 540 (613)
+.|.+.+.||+|+||.||++. ..+++.+|+|++... ....+.+|++++.++ +||||+++++++....
T Consensus 8 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 8 RDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKL-KHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred ccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhc-CCCCccchhhheeccccccccc
Confidence 459999999999999999974 667899999988752 123578899988877 9999999999875433
Q ss_pred --EEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 541 --FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 541 --~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
.+++||||+.++|.+.+... ...+++.++..++. .+|.|||+.+++|||+| ++..++
T Consensus 87 ~~~~~lv~~~~~~~l~~~~~~~-----~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~ 152 (311)
T cd07866 87 RGSVYMVTPYMDHDLSGLLENP-----SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQG 152 (311)
T ss_pred CceEEEEEecCCcCHHHHHhcc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence 57999999999888888642 23456666555544 89999999999888887 555544
No 360
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.36 E-value=4.7e-12 Score=127.62 Aligned_cols=112 Identities=24% Similarity=0.150 Sum_probs=87.9
Q ss_pred eeEeecCceEEEEEEee--CCc--EEEEEEeeccch----HHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 479 KEIAKGSNGTVVLEGNY--EGR--SVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~--~g~--~VAVK~l~~~~~----~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
+.||+|+||.||++... .++ .||+|.+..... +.+.+|++.+.++ +||||+++++.+.. ...+++|||++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~-~~~~~v~e~~~ 78 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-DHENLIRLYGVVLT-HPLMMVTELAP 78 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhc-CCCCccceeEEEcC-CeEEEEEEecC
Confidence 46899999999997532 333 699999987433 4788999999888 99999999999988 89999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++.... ...++...+..++. .++.+||..+++|||||
T Consensus 79 ~~~L~~~l~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~ 124 (257)
T cd05040 79 LGSLLDRLRKDA----LGHFLISTLCDYAVQIANGMRYLESKRFIHRDLA 124 (257)
T ss_pred CCcHHHHHHhcc----cccCcHHHHHHHHHHHHHHHHHHHhCCccccccC
Confidence 79999998642 13345555544333 89999999988776665
No 361
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.36 E-value=2.1e-12 Score=132.08 Aligned_cols=118 Identities=21% Similarity=0.272 Sum_probs=93.5
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
|.+.+.||+|+||+||++. ..+++.||+|++.... .....+|+..+.++.+||||+++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 4677899999999999985 4568899999987632 2245678888888833999999999999999999999999
Q ss_pred CccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
.|+|.+++.... ...+....+..++. .++.|||+.+++|+|||
T Consensus 81 ~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~ 126 (283)
T cd07830 81 EGNLYQLMKDRK----GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLK 126 (283)
T ss_pred CCCHHHHHHhcc----cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 889999987642 23445555555444 89999999998887776
No 362
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.36 E-value=4.1e-12 Score=134.48 Aligned_cols=117 Identities=24% Similarity=0.234 Sum_probs=94.0
Q ss_pred CceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeC--------
Q 007199 472 GKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQ-------- 539 (613)
Q Consensus 472 ~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~-------- 539 (613)
+.+|...+.||+|+||.||++. ..+|+.||+|.+... ..+.+.+|++++.++ +||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~~ 82 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRL-DHDNIVKVYEVLGPSGSDLTEDV 82 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhc-CCCcchhhHhhhccccccccccc
Confidence 3569999999999999999974 677899999998753 344688999999887 999999999876654
Q ss_pred ------CEEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 540 ------DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 540 ------~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
...|+||||++++|.+++... .+++..+..++. .|+.|||+.+++|||||
T Consensus 83 ~~~~~~~~~~lv~e~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~givH~dik 141 (342)
T cd07854 83 GSLTELNSVYIVQEYMETDLANVLEQG-------PLSEEHARLFMYQLLRGLKYIHSANVLHRDLK 141 (342)
T ss_pred ccccccceEEEEeecccccHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 368999999999998888642 244555544433 89999999999888887
No 363
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.36 E-value=1.8e-12 Score=144.35 Aligned_cols=130 Identities=14% Similarity=0.077 Sum_probs=90.4
Q ss_pred cCceEEEeeeEeecCceEEEEEEe--eCCcEEEEE------------------Eeec--cchHHHHHHHHHHHhcCCCCc
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLEGN--YEGRSVAVK------------------RLVK--THHDVALKEIQNLIASDQHPN 528 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~~~--~~g~~VAVK------------------~l~~--~~~~~~~~Ei~~L~~l~~Hpn 528 (613)
+.+.|.+.+.||+|+||+||++.. ..+...+.| .+.. .....+.+|+++|.++ +|||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l-~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL-NHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC-CCCC
Confidence 335699999999999999998642 222222222 1111 1223678999999888 9999
Q ss_pred ceeEEEEEEeCCEEEEEecCCCccHHHHHHHhcCCCccccCCHHH---HHHHHHHHHHHHhcCCceeeccc----eecCC
Q 007199 529 IVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQ---DSNLLNEVRIRLLPVMENTKDIE----LWKAN 601 (613)
Q Consensus 529 IV~l~g~~~~~~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~---~~~~~~~~l~~Lh~~~iiHrDlK----llh~d 601 (613)
|+++++++...+..|+++|++.++|.+++...... ......... +...++.||.|||+.+|+||||| |+..+
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~-~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~ 303 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFD-WKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD 303 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccccCHHHHHhhcccc-ccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 99999999999999999999999999888653210 011111222 23334489999999999888877 55544
Q ss_pred C
Q 007199 602 G 602 (613)
Q Consensus 602 g 602 (613)
+
T Consensus 304 ~ 304 (501)
T PHA03210 304 G 304 (501)
T ss_pred C
Confidence 4
No 364
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.36 E-value=5.1e-12 Score=128.57 Aligned_cols=121 Identities=17% Similarity=0.115 Sum_probs=89.4
Q ss_pred EEEeeeEeecCceEEEEEEe----eCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-----
Q 007199 475 VVFNKEIAKGSNGTVVLEGN----YEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD----- 540 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~----~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~----- 540 (613)
|.+.+.||+|+||.||++.. .+++.||||++... ..+.+.+|+++|.++ +||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEF-DHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcC-CCCCcceEEEEEccCCCCCcc
Confidence 45678899999999999742 34688999998753 234688999988777 9999999999887543
Q ss_pred -EEEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 541 -FVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 -~~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
..++++||+. |+|.+++...+.......++......++. .++.|||+.+++|||||
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dik 140 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLA 140 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccc
Confidence 3478999999 79998886432111122344444444443 89999999998887777
No 365
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.36 E-value=2.8e-12 Score=130.61 Aligned_cols=123 Identities=23% Similarity=0.185 Sum_probs=98.4
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|...+.||+|+||.||++. ..++..||+|.+... ..+.+.+|++++.++.+||||+++++++...+..+++|
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 81 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVL 81 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEE
Confidence 48889999999999999975 568999999988752 23467889988888733999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||++ |+|.+++...+ .++...+..+ +..++.+||+.+++|+|+| ++..++
T Consensus 82 e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~ 139 (280)
T cd05581 82 EYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM 139 (280)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC
Confidence 9997 69999998642 3444444443 3489999999999888887 555554
No 366
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.36 E-value=2.9e-12 Score=131.34 Aligned_cols=121 Identities=20% Similarity=0.197 Sum_probs=91.1
Q ss_pred EEEeeeEeecCceEEEEEEee------CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEGNY------EGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~------~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
|.+.+.||+|+||.||++... .+..||+|++.... .+.+.+|+.++..+ +||||+++++++...+..++
T Consensus 7 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 7 VRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRL-QHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcC-CCCCcCeEEEEEcCCCceEE
Confidence 667788999999999997532 35789999998532 24678898877666 99999999999999999999
Q ss_pred EecCCC-ccHHHHHHHhcCC----------CccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSGS----------FEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~----------~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
++||++ ++|.+++...... .....++...+.+ .+..|+.|+|+.+++|||||
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlk 151 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLA 151 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 999999 6999998642100 0112244443333 33489999999999887776
No 367
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.36 E-value=5e-12 Score=131.30 Aligned_cols=116 Identities=22% Similarity=0.141 Sum_probs=88.6
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCc----EEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGR----SVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~----~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
.|+..+.||+|+||.||++. ..+|. .||+|.+.... ..++.+|+.++.++ +||||+++++++... ..++
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l-~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhC-CCCCcccEEEEEcCC-Ccee
Confidence 37888899999999999974 44554 47899887532 23678899888777 999999999998754 5679
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
++||++ |+|.+++..+. ..++...+.. .++.++.|||..+++|||||
T Consensus 86 v~e~~~~g~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dik 136 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHK-----DNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLA 136 (303)
T ss_pred eehhcCCCCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHhhcCeeccccc
Confidence 999999 79999997642 2234444333 33389999999998887776
No 368
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.36 E-value=6e-12 Score=127.06 Aligned_cols=110 Identities=25% Similarity=0.206 Sum_probs=85.4
Q ss_pred eeEeecCceEEEEEE-ee---CCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 479 KEIAKGSNGTVVLEG-NY---EGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~-~~---~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
++||+|+||.||++. .. .+..+|+|.+.... .+.+.+|++++..+ .||||+++++++. .+..++||||++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~-~~~~~~v~e~~~ 78 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL-DHPCIVRLIGVCK-GEPLMLVMELAP 78 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhc-CCCCeeeEEEEEc-CCceEEEEEeCC
Confidence 469999999999974 22 23689999988633 34788999999887 9999999999876 456899999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++.... .+++..+..++. .++.+||..+++|||||
T Consensus 79 ~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~ 122 (257)
T cd05060 79 LGPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLESKHFVHRDLA 122 (257)
T ss_pred CCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcc
Confidence 69999998642 344444444433 89999999988877766
No 369
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.36 E-value=2.1e-12 Score=136.26 Aligned_cols=126 Identities=20% Similarity=0.211 Sum_probs=95.9
Q ss_pred ccCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC--E
Q 007199 470 RIGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD--F 541 (613)
Q Consensus 470 ~i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~--~ 541 (613)
.+.+.|.+.+.||+|+||.||++. ..+++.+|||++... ....+.+|++++.++.+||||+++++++...+ .
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~ 83 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD 83 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence 344558889999999999999975 557889999988642 23467789988876669999999999987543 6
Q ss_pred EEEEecCCCccHHHHHHHhcCCCccccCCHHH---HHHHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQ---DSNLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 542 ~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~---~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
.|+||||++++|.+++... .+.... +...++.+|.|||..+++||||| ++..++
T Consensus 84 ~~lv~e~~~~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~ 144 (337)
T cd07852 84 IYLVFEYMETDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC 144 (337)
T ss_pred EEEEecccccCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC
Confidence 8999999999999988642 223332 23333489999999999888887 555544
No 370
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.35 E-value=7.2e-12 Score=127.76 Aligned_cols=108 Identities=14% Similarity=0.097 Sum_probs=83.4
Q ss_pred EeecCceEEEEEE-eeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-ccHHHHHH
Q 007199 481 IAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CSLNDLIY 558 (613)
Q Consensus 481 LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-GsL~~~L~ 558 (613)
||+|+||.||++. ..+++.+|+|.+..........++ ...+.+||||+++++++...+..|+||||++ |+|.+++.
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~~~--~~~~~~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~ 101 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEPMV--HQLMKDNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLK 101 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhHHH--HHHhhcCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHH
Confidence 6999999999974 678899999998864333222222 2222379999999999999999999999999 69999997
Q ss_pred HhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 559 VLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
... .+++..+..++. .++.+||+.+++|||||
T Consensus 102 ~~~------~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~ 136 (267)
T PHA03390 102 KEG------KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIK 136 (267)
T ss_pred hcC------CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCC
Confidence 532 445555555444 89999999999888877
No 371
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.35 E-value=7.2e-12 Score=129.52 Aligned_cols=119 Identities=19% Similarity=0.230 Sum_probs=93.2
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+.|.+.+.||+|+||.||++. ..+++.||||+++.. ....+.+|+..+.+...||||+++++++......|++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 348889999999999999975 445899999999853 223567788777777579999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhc-CCceeeccc
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLP-VMENTKDIE 596 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~-~~iiHrDlK 596 (613)
|++++|.+++.... ..++......++. .++.|||+ .+++||||+
T Consensus 95 ~~~~~l~~l~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~ 142 (296)
T cd06618 95 LMSTCLDKLLKRIQ-----GPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVK 142 (296)
T ss_pred ccCcCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCc
Confidence 99988888776532 2444444444433 89999997 588887777
No 372
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.35 E-value=1.9e-12 Score=125.47 Aligned_cols=110 Identities=16% Similarity=-0.004 Sum_probs=73.8
Q ss_pred eeeEeecCceEEEEEEeeCCcEEEEEEeeccch------------H-----------------HHHHHHHHHHhcCCCCc
Q 007199 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH------------D-----------------VALKEIQNLIASDQHPN 528 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~~------------~-----------------~~~~Ei~~L~~l~~Hpn 528 (613)
...||+|+||.||+|...+|+.||||+++.... . ...+|+++|.++ .|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRL-VTAG 80 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHH-HHCC
Confidence 357999999999998656899999999975311 1 123488888888 7776
Q ss_pred ceeEEEEEEeCCEEEEEecCCCc-cHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHH-hcCCceeeccc
Q 007199 529 IVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRL-LPVMENTKDIE 596 (613)
Q Consensus 529 IV~l~g~~~~~~~~~LV~E~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~L-h~~~iiHrDlK 596 (613)
+......... ..+|||||++| +|...+... ..++...+..++ ..++.++ |..+|+|||+|
T Consensus 81 v~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~------~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlk 145 (190)
T cd05147 81 IPCPEPILLK--SHVLVMEFIGDDGWAAPRLKD------APLSESKARELYLQVIQIMRILYQDCRLVHADLS 145 (190)
T ss_pred CCCCcEEEec--CCEEEEEEeCCCCCcchhhhc------CCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 6444333222 23899999996 555443221 234444444443 3899998 68888877766
No 373
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.35 E-value=3.3e-12 Score=133.02 Aligned_cols=113 Identities=15% Similarity=0.005 Sum_probs=87.2
Q ss_pred eeeEeecCceEEEEEEeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-c
Q 007199 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-C 551 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-G 551 (613)
.+.+|.|+++.||+ ...+++.||||++... ..+.+.+|++++..+ +|+||+++++++...+..+++|||++ |
T Consensus 7 ~~~~~~~~~v~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l-~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 7 GKCFEDLMIVHLAK-HKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQL-QHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hHhhcCCceEEEEE-ecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhc-CCcchhhhhheeecCCeEEEEEeccCCC
Confidence 34445555555555 3458999999998753 334788999999887 99999999999999999999999999 7
Q ss_pred cHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 552 SLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 552 sL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
+|.+++.... ...+++.++..++ +.||.|||+.+|+|||||
T Consensus 85 ~l~~~l~~~~----~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk 128 (314)
T cd08216 85 SCEDLLKTHF----PEGLPELAIAFILKDVLNALDYIHSKGFIHRSVK 128 (314)
T ss_pred CHHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 9999998642 2234555554443 389999999999887777
No 374
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.35 E-value=8e-12 Score=126.95 Aligned_cols=120 Identities=18% Similarity=0.200 Sum_probs=92.2
Q ss_pred EEEeeeEeecCceEEEEEEee--CCcEEEEEEeecc-------------chHHHHHHHHHHHhcCCCCcceeEEEEEEeC
Q 007199 475 VVFNKEIAKGSNGTVVLEGNY--EGRSVAVKRLVKT-------------HHDVALKEIQNLIASDQHPNIVRWYGVESDQ 539 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~--~g~~VAVK~l~~~-------------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~ 539 (613)
|++.+.||+|+||.||++... .++.+|+|.+... ...++.+|+.++.+..+||||+++++++...
T Consensus 2 y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 81 (269)
T cd08528 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEN 81 (269)
T ss_pred chhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccC
Confidence 677889999999999997533 4788999988631 1235678888887766999999999999999
Q ss_pred CEEEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhc-CCceeeccc
Q 007199 540 DFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLP-VMENTKDIE 596 (613)
Q Consensus 540 ~~~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~-~~iiHrDlK 596 (613)
+..+++|||++ ++|.+++..... ....++......++. .++.+||. .+++|+|||
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~ 141 (269)
T cd08528 82 DRLYIVMDLIEGAPLGEHFNSLKE--KKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLT 141 (269)
T ss_pred CeEEEEEecCCCCcHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCC
Confidence 99999999999 599998865321 223455555554443 89999996 678887777
No 375
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.35 E-value=9e-13 Score=124.34 Aligned_cols=128 Identities=18% Similarity=0.210 Sum_probs=103.6
Q ss_pred eEEEeeeEeecCceEEEE-EEeeCCcEEEEEEeec----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVL-EGNYEGRSVAVKRLVK----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk-~~~~~g~~VAVK~l~~----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.+.-...||+|++|.|-+ .+..+|..+|||+++. +......+|+.+.++...+|.+|++||.+.+...++|.||.
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL 126 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence 356677899999999988 5789999999999985 23447888999888888999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccceecCCCcCcceee
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlKllh~dg~PsniLl 609 (613)
|.-||..+-++--. ....+++..+-++.+ .||+|||++ ++++|||.||||||+
T Consensus 127 M~tSldkfy~~v~~--~g~~ipE~vlGkIa~Svv~al~~L~~k------L~vIHRDvKPsNiLI 182 (282)
T KOG0984|consen 127 MDTSLDKFYRKVLK--KGGTIPEDVLGKIAVSVVHALEFLHSK------LSVIHRDVKPSNILI 182 (282)
T ss_pred hhhhHHHHHHHHHh--cCCcCchHHhhHhHHHHHHHHHHHHHH------hhhhhccCCcceEEE
Confidence 99888776654211 456788888877776 899999885 345666677888887
No 376
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.35 E-value=1.1e-11 Score=126.70 Aligned_cols=124 Identities=25% Similarity=0.195 Sum_probs=95.5
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhc--CCCCcceeEEEEEEeCCE-----
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIAS--DQHPNIVRWYGVESDQDF----- 541 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l--~~HpnIV~l~g~~~~~~~----- 541 (613)
|++.+.||+|+||.||++. ..+++.||+|+++.. ....+.+|+.++.++ .+||||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 4678899999999999985 456899999999742 123566788777655 369999999999998876
Q ss_pred EEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 542 ~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
.+++|||+.++|.+++.... ...+++..+..++. .||.+||+.+++|+|+| ++..++
T Consensus 81 ~~l~~e~~~~~l~~~l~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~ 144 (287)
T cd07838 81 LTLVFEHVDQDLATYLSKCP----KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG 144 (287)
T ss_pred eEEEehhcccCHHHHHHHcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCC
Confidence 99999999999999987642 22355555554444 89999999999888887 555543
No 377
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.34 E-value=1.1e-11 Score=130.58 Aligned_cols=122 Identities=20% Similarity=0.194 Sum_probs=93.9
Q ss_pred EEEeeeEeecCceEEEEEE-eeC--CcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC----CEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYE--GRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ----DFV 542 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~--g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~----~~~ 542 (613)
|.+.+.||+|+||.||++. ..+ +..||+|++... ..+.+.+|++++.++.+||||+++++++... ..+
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 81 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNEL 81 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcE
Confidence 7788999999999999975 444 789999998752 2346788999998886799999999876533 468
Q ss_pred EEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 543 YLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 543 ~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+++||+.++|.+++... ..+++..+..++. .+|.|||..+++||||| ++..++
T Consensus 82 ~~~~e~~~~~L~~~l~~~------~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~ 142 (332)
T cd07857 82 YLYEELMEADLHQIIRSG------QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC 142 (332)
T ss_pred EEEEecccCCHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCC
Confidence 999999999999998743 2344554444443 89999999999888887 554444
No 378
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.34 E-value=4.6e-12 Score=129.39 Aligned_cols=122 Identities=23% Similarity=0.215 Sum_probs=96.5
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~-----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|...+.||+|++|.||++. ..+++.+|+|++.... ...+.+|++++.++ +|+||+++++++...+..++||||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKEL-NHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHh-cCCCcchHHHhhccCCCEEEEEec
Confidence 3456789999999999974 5678999999987532 34788899999888 899999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
++++|.+++.... ..++...+..+ ++.++.+||..+++|+||| ++..++
T Consensus 80 ~~~~l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~ 135 (283)
T cd05118 80 MDTDLYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG 135 (283)
T ss_pred cCCCHHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC
Confidence 9999999887632 23444444333 3389999999999888877 555444
No 379
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.34 E-value=4.4e-12 Score=133.18 Aligned_cols=121 Identities=22% Similarity=0.229 Sum_probs=97.2
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-----EEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD-----FVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-----~~~ 543 (613)
|.+.+.||+|+||.||++. ..++..||+|++... ..+.+.+|++++..+ +||||+++++++...+ ..|
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHL-RHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhc-CCcchhhhhhhhcccCcccccceE
Confidence 7888999999999999985 456899999988763 234788999999888 9999999999998775 789
Q ss_pred EEecCCCccHHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 544 LSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 544 LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
++|||++++|.++++.. ..+++..+..+ ++.+|.+||+.+++||||| +++.++
T Consensus 81 lv~e~~~~~l~~~l~~~------~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~ 140 (330)
T cd07834 81 IVTELMETDLHKVIKSP------QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC 140 (330)
T ss_pred EEecchhhhHHHHHhCC------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence 99999999999998743 24455544443 3389999999999888887 555553
No 380
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.34 E-value=1.5e-12 Score=138.10 Aligned_cols=118 Identities=18% Similarity=0.144 Sum_probs=97.2
Q ss_pred ceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~-----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
..|+..+.||+|+.+.||++...+.+.+|+|++.. +..+.+.+|+..|.++..|.+||+|++|...++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 44899999999999999998888888899987764 2334799999999999999999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHH----HHHHHHHHHhcCCceeeccc
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSN----LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~----~~~~~l~~Lh~~~iiHrDlK 596 (613)
|-+-||..+|+... .....|..+ .++++++++|..+|||.|||
T Consensus 441 ~Gd~DL~kiL~k~~------~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLK 487 (677)
T KOG0596|consen 441 CGDIDLNKILKKKK------SIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLK 487 (677)
T ss_pred cccccHHHHHHhcc------CCCchHHHHHHHHHHHHHHHHHHHhceeecCCC
Confidence 88899999999743 222223222 23389999999999877765
No 381
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.33 E-value=1.9e-11 Score=122.57 Aligned_cols=119 Identities=24% Similarity=0.257 Sum_probs=96.5
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|...+.||+|+||.||++. ..++..+|+|++... ..+.+.+|++++..+ +|||++++++.+...+..++++||
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhc-CCCChhheEEEEecCCEEEEEEEe
Confidence 7788999999999999974 457899999998853 334788999999888 899999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++ ++|.+++..... ....++...+..++. .++.+||+.+++|+|++
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~ 130 (258)
T cd08215 81 ADGGDLSQKIKKQKK--EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIK 130 (258)
T ss_pred cCCCcHHHHHHHhhc--cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCC
Confidence 99 599999986421 123455554444444 89999999999888776
No 382
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.33 E-value=9.1e-12 Score=128.19 Aligned_cols=114 Identities=25% Similarity=0.255 Sum_probs=91.7
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
|...+.||+|++|.||++. ..+++.+|+|++... ..+.+.+|+.++..+ +||||+++++++...+..++++||++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~-~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDY-QHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHc-CCCChheEEEEEEcCCeEEEEEeccC
Confidence 5556799999999999974 567899999988642 334678999888777 99999999999999999999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++|.+++... .++...+. ..++.++.+||+.+++|||||
T Consensus 100 ~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~ 142 (285)
T cd06648 100 GGALTDIVTHT-------RMNEEQIATVCLAVLKALSFLHAQGVIHRDIK 142 (285)
T ss_pred CCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 5999998752 23333333 334489999999999887765
No 383
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.33 E-value=8.4e-12 Score=130.03 Aligned_cols=116 Identities=22% Similarity=0.256 Sum_probs=93.1
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
|...+.||+|+||.||++. ..++..+|+|.+... ..+.+.+|++++..+ +|+|++++++++...+..++|||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKL-RHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhC-CCCCcccEEEEEEcCCeeEEEEE
Confidence 6677889999999999975 567889999988642 123677899988887 99999999999999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
|+.|+|.+++.... ..+....+..++ +.++.|||..+++|||||
T Consensus 96 ~~~~~l~~~~~~~~-----~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~ 142 (308)
T cd06634 96 YCLGSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVK 142 (308)
T ss_pred ccCCCHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 99999988886532 234555554443 389999999998887776
No 384
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.33 E-value=1.1e-12 Score=149.87 Aligned_cols=63 Identities=29% Similarity=0.403 Sum_probs=53.9
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVE 536 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~ 536 (613)
..|+..++||+|+||.|||++ +.+|+.+|||+|.... .....+|+..|.++ +|||||+++..|
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArL-nHpNVVRYysAW 546 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARL-NHPNVVRYYSAW 546 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhc-CCcceeeeehhh
Confidence 347888999999999999974 8999999999998642 23688999999888 999999999764
No 385
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.33 E-value=1.4e-11 Score=126.27 Aligned_cols=111 Identities=18% Similarity=0.062 Sum_probs=83.2
Q ss_pred eEeecCceEEEEEE-eeCCcEEEEEEeeccch------HHHHHHHHHHH--hcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 480 EIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHH------DVALKEIQNLI--ASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 480 ~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~------~~~~~Ei~~L~--~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
+||+|+||.||++. ..+++.||+|.+.+... ..+..|...+. +...||||+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 48999999999974 56789999999875321 12334433222 22489999999999999999999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++... ..+++..+..++. .++.|||+.+++|||+|
T Consensus 81 g~~L~~~l~~~------~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~ 124 (278)
T cd05606 81 GGDLHYHLSQH------GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLK 124 (278)
T ss_pred CCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCC
Confidence 5999888643 2355555544443 89999999999888777
No 386
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.32 E-value=7.3e-12 Score=129.55 Aligned_cols=114 Identities=22% Similarity=0.217 Sum_probs=90.1
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec---cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK---THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~---~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
|.....||+|+||.||++. ..+++.||||.+.. ...+.+.+|+.++..+ +|+||+++++++...+..+++|||++
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l-~h~~iv~~~~~~~~~~~~~lv~e~~~ 100 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDY-QHENVVEMYNSYLVGDELWVVMEFLE 100 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhc-CCcchhheeeEEEeCCEEEEEEecCC
Confidence 3345689999999999974 56889999998864 2334688999888777 99999999999999999999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHH---HHHHHHHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQD---SNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~---~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++|.+++... .+....+ .+.++.++.|||+.+++|+|+|
T Consensus 101 ~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~ 143 (292)
T cd06657 101 GGALTDIVTHT-------RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIK 143 (292)
T ss_pred CCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCC
Confidence 5999887532 1233333 3334489999999999887777
No 387
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.32 E-value=6e-12 Score=126.81 Aligned_cols=115 Identities=24% Similarity=0.261 Sum_probs=91.7
Q ss_pred EeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-cc
Q 007199 481 IAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CS 552 (613)
Q Consensus 481 LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-Gs 552 (613)
||+|+||.||++. ..+|+.+|+|.+... ..+.+.+|++.+.++ +||||+++++.+......|++|||++ |+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~-~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 79 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQA-QSPYVVKLYYSFQGKKNLYLVMEYLPGGD 79 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhC-CCcchhHHHHheecCcEEEEEEecCCCCc
Confidence 6899999999975 456999999998753 234788899888887 89999999999999999999999999 59
Q ss_pred HHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc----eecCCC
Q 007199 553 LNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 553 L~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|.++++... .+++..+..+ ++.+|.+||..+++|+||+ ++..++
T Consensus 80 L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~ 130 (265)
T cd05579 80 LASLLENVG------SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG 130 (265)
T ss_pred HHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC
Confidence 999998642 3444444433 3489999999999888877 555444
No 388
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.32 E-value=1e-11 Score=124.74 Aligned_cols=119 Identities=19% Similarity=0.186 Sum_probs=95.6
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|++.+.||+|+||.||++ ...+++.+|+|.+... ....+.+|++++.++ +|+||+++++++......++||||
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASV-NHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhC-CCCCchhhhhhhccCCEEEEEehh
Confidence 778899999999999997 4668899999998752 234677899889888 899999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
++ ++|.+++..... ....+....+..++ ..++.+||+.+++|+|++
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~ 130 (256)
T cd08530 81 APFGDLSKAISKRKK--KRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLK 130 (256)
T ss_pred cCCCCHHHHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 99 599999876321 12334555444443 389999999999888776
No 389
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.31 E-value=8.4e-12 Score=128.21 Aligned_cols=121 Identities=21% Similarity=0.227 Sum_probs=90.5
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
|...+.||+|+||.||++ ...+++.+|+|.+... ....+.+|+.++.++..|+||+++++++...+..+++|||+
T Consensus 6 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~ 85 (288)
T cd06616 6 LKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELM 85 (288)
T ss_pred hHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecc
Confidence 556678999999999996 4677899999998753 23468899999988856999999999999999999999999
Q ss_pred CccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcC-Cceeeccc
Q 007199 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPV-MENTKDIE 596 (613)
Q Consensus 550 ~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~-~iiHrDlK 596 (613)
.++|.++...... .....+++..+..++. .+++|||.. +++|||||
T Consensus 86 ~~~l~~l~~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlk 135 (288)
T cd06616 86 DISLDKFYKYVYE-VLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVK 135 (288)
T ss_pred cCCHHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCC
Confidence 9766554432100 0123455555555544 899999874 77776665
No 390
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=99.31 E-value=1.1e-11 Score=138.29 Aligned_cols=139 Identities=16% Similarity=0.187 Sum_probs=99.3
Q ss_pred eCCCCeeeEEeeCCCc--eeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHH-----------HhhhCc
Q 007199 64 DTKLGKIRWSFGTGRP--IYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE-----------YIRRMP 130 (613)
Q Consensus 64 d~~tG~~~W~~~~~~~--i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~-----------~v~~sP 130 (613)
|..+.++.|+|+++.. +.++ ++-. .+.+|+..+ +|.|||+|..||++ +|.+.... .+...|
T Consensus 43 nv~~L~~~W~~~~g~~~g~~st---Pvv~-~g~vyv~s~-~g~v~AlDa~TGk~-lW~~~~~~~~~~~~~~~~~~~~rg~ 116 (527)
T TIGR03075 43 NVKKLQPAWTFSLGKLRGQESQ---PLVV-DGVMYVTTS-YSRVYALDAKTGKE-LWKYDPKLPDDVIPVMCCDVVNRGV 116 (527)
T ss_pred hhccceEEEEEECCCCCCcccC---CEEE-CCEEEEECC-CCcEEEEECCCCce-eeEecCCCCcccccccccccccccc
Confidence 4557889999998743 3333 2212 224565544 99999999999999 99987642 123456
Q ss_pred eeecCCcEEEEeecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccccccccEEEEEee-
Q 007199 131 YISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRT- 209 (613)
Q Consensus 131 ~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~igr~- 209 (613)
++. ++.||+|+.++.++|||++||+++|++...+.....+ ....| ...+++||+|..
T Consensus 117 av~-~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~----------------~tssP-----~v~~g~Vivg~~~ 174 (527)
T TIGR03075 117 ALY-DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYT----------------ITAAP-----LVVKGKVITGISG 174 (527)
T ss_pred eEE-CCEEEEEcCCCEEEEEECCCCCEEeeccccccccccc----------------ccCCc-----EEECCEEEEeecc
Confidence 777 8899999999999999999999999997643210000 00011 123668999875
Q ss_pred -----eeEEEEEeCCCCceEEEEEec
Q 007199 210 -----DYVLQSTSQDSGEVLWNVAYA 230 (613)
Q Consensus 210 -----d~~l~a~d~~~G~~~Wn~t~~ 230 (613)
++.|+|+|++||+++|++...
T Consensus 175 ~~~~~~G~v~AlD~~TG~~lW~~~~~ 200 (527)
T TIGR03075 175 GEFGVRGYVTAYDAKTGKLVWRRYTV 200 (527)
T ss_pred cccCCCcEEEEEECCCCceeEeccCc
Confidence 689999999999999998765
No 391
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.30 E-value=1.1e-11 Score=131.28 Aligned_cols=115 Identities=17% Similarity=0.165 Sum_probs=89.9
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC------
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD------ 540 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~------ 540 (613)
..|...+.||+|+||.||++. ..+|+.||||++.+. ....+.+|++++.++ +||||+++++++....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHM-QHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhc-CCCCccchhheecccccCCCCc
Confidence 458899999999999999975 567999999998752 223578999988887 9999999999987543
Q ss_pred EEEEEecCCCccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccc
Q 007199 541 FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 ~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlK 596 (613)
..++|+||+.++|..++.. .++...+. ..++.||.|||+.+++|||||
T Consensus 94 ~~~lv~e~~~~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlk 144 (342)
T cd07879 94 DFYLVMPYMQTDLQKIMGH--------PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLK 144 (342)
T ss_pred eEEEEecccccCHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 5699999999888766531 23333333 334489999999999888777
No 392
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.30 E-value=3.9e-11 Score=119.55 Aligned_cols=116 Identities=28% Similarity=0.346 Sum_probs=95.6
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
|...+.||+|+||.||++. ..++..+++|++... ..+.+.+|++.+.++ +|+||+++++++...+..++++||++
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKC-KHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhC-CCCCEeEEEEEEecCCeEEEEEecCC
Confidence 6778899999999999975 457899999999864 345889999988877 89999999999999999999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
++|.+++.... ..++...+..++ ..++.+||..+++|+|++
T Consensus 81 ~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~ 125 (253)
T cd05122 81 GGSLKDLLKSTN-----QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIK 125 (253)
T ss_pred CCcHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCC
Confidence 69999987642 234455544443 389999999999887776
No 393
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.30 E-value=1.2e-11 Score=136.35 Aligned_cols=123 Identities=13% Similarity=0.108 Sum_probs=82.5
Q ss_pred ceEEEeeeEeecCceEEEEEEe-----------------eCCcEEEEEEeeccc---hH--------------HHHHHHH
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN-----------------YEGRSVAVKRLVKTH---HD--------------VALKEIQ 518 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~-----------------~~g~~VAVK~l~~~~---~~--------------~~~~Ei~ 518 (613)
+.|.+.++||+|+||+||++.. ..++.||||++.... .+ ....|+.
T Consensus 145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~ 224 (507)
T PLN03224 145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY 224 (507)
T ss_pred cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence 4599999999999999999732 345689999987421 11 2334665
Q ss_pred HHHhcCCCCc-----ceeEEEEEEe--------CCEEEEEecCCC-ccHHHHHHHhcCCC------------------cc
Q 007199 519 NLIASDQHPN-----IVRWYGVESD--------QDFVYLSLERCT-CSLNDLIYVLSGSF------------------EE 566 (613)
Q Consensus 519 ~L~~l~~Hpn-----IV~l~g~~~~--------~~~~~LV~E~~~-GsL~~~L~~~~~~~------------------~~ 566 (613)
++.++ +|.+ +++++++|.. .+..+|||||++ |+|.++|+...... ..
T Consensus 225 ~l~~l-~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 225 MCAKI-KRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHh-hcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 66555 5544 4677777753 357899999999 79999998532110 00
Q ss_pred ccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 567 QLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 567 ~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
.......+..++ +.++.|||..+++|||||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLK 336 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIK 336 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCc
Confidence 111223333333 389999999999888876
No 394
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.30 E-value=1.1e-12 Score=135.48 Aligned_cols=127 Identities=22% Similarity=0.201 Sum_probs=95.3
Q ss_pred cccCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec--cc--------hHHHHHHHHHHHhcCCCCcceeEEEEEE
Q 007199 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK--TH--------HDVALKEIQNLIASDQHPNIVRWYGVES 537 (613)
Q Consensus 469 ~~i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~--~~--------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~ 537 (613)
..+.++|-+..+||+|+|+.||++ .+.+.+.||||+-.. .. .+...+|.++.+.+ .||.||++|++|.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL-DHpRIVKlYDyfs 537 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL-DHPRIVKLYDYFS 537 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc-Ccceeeeeeeeee
Confidence 344466788889999999999998 688899999997542 21 22567888887666 9999999999997
Q ss_pred -eCCEEEEEecCCCc-cHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcC--CceeeccceecCCCcCcceee
Q 007199 538 -DQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPV--MENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 538 -~~~~~~LV~E~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~--~iiHrDlKllh~dg~PsniLl 609 (613)
+.+.+|-|+|||+| +|+-||+.++ .+++..+..++. .||.||... .|||- |.||-||||
T Consensus 538 lDtdsFCTVLEYceGNDLDFYLKQhk------lmSEKEARSIiMQiVnAL~YLNEikpPIIHY-------DLKPgNILL 603 (775)
T KOG1151|consen 538 LDTDSFCTVLEYCEGNDLDFYLKQHK------LMSEKEARSIIMQIVNALKYLNEIKPPIIHY-------DLKPGNILL 603 (775)
T ss_pred eccccceeeeeecCCCchhHHHHhhh------hhhHHHHHHHHHHHHHHHHHHhccCCCeeee-------ccCCccEEE
Confidence 45689999999998 9999999764 344555544444 788888653 45555 455666665
No 395
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.30 E-value=9.4e-12 Score=126.99 Aligned_cols=116 Identities=21% Similarity=0.229 Sum_probs=93.8
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
|+..+.||+|.||.||++. ..+++.+|+|.+... ..+.+.+|++++.++ +|+||+++++++...+..++||||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKEL-KHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhc-CCCCHHHHHhhhhcCCceEEEecC
Confidence 4566789999999999975 556899999998863 224678899888777 999999999999999999999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
++++|.+++.... ..+++....+++. .++.+||..+++|||++
T Consensus 80 ~~~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~ 125 (282)
T cd07829 80 CDMDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLK 125 (282)
T ss_pred cCcCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 9999999998642 2344444444433 89999999998887777
No 396
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.29 E-value=1.1e-11 Score=131.32 Aligned_cols=124 Identities=18% Similarity=0.190 Sum_probs=97.6
Q ss_pred cCceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCE---
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDF--- 541 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~--- 541 (613)
+.+.|...+.||+|+||.||++. ..+++.||||++... ..+.+.+|+.++.++ +||||+++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHM-DHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhc-cCCCHHHHHHHhhccccccc
Confidence 44569999999999999999974 567889999988742 234677899988887 99999999998876654
Q ss_pred ---EEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 542 ---VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 542 ---~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
.++|+||+.++|.+++... .+++..+..++. .++.+||+.+++||||| ++..++
T Consensus 92 ~~~~~lv~e~~~~~L~~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~ 155 (343)
T cd07851 92 FQDVYLVTHLMGADLNNIVKCQ-------KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 155 (343)
T ss_pred cccEEEEEecCCCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence 8999999988999998642 345555444443 89999999999888877 555444
No 397
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.28 E-value=8.6e-12 Score=126.04 Aligned_cols=119 Identities=20% Similarity=0.162 Sum_probs=90.4
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec--------cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK--------THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~--------~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
|.+.+.||+|+||.||++. ...+..+++|.++. .....+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL-DHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhC-CCCcHHHHHHHHhcCCceEEE
Confidence 7888999999999999974 44455566665543 1222567788888777 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|||++ ++|.+++..... ....+++..+..++. .++.|||+.+++|+|+|
T Consensus 81 ~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~ 133 (260)
T cd08222 81 TEYCEGRDLDCKLEELKH--TGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLK 133 (260)
T ss_pred EEeCCCCCHHHHHHHHhh--cccccCHHHHHHHHHHHHHHHHHHHHcCccccCCC
Confidence 99999 599999876421 223455555544443 89999999999888777
No 398
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.28 E-value=7.3e-14 Score=135.06 Aligned_cols=124 Identities=19% Similarity=0.227 Sum_probs=96.7
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeC-------
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQ------- 539 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~------- 539 (613)
..|.-...||+|.||.|++| ...+|+.||+|++.-+ .-....+|+.+|..+ +|+|++.+++.|...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~l-kHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLL-KHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHh-cchhHHHHHHHHhhccCCcccc
Confidence 33666778999999999997 4777888999865432 223678999999777 999999999888642
Q ss_pred -CEEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc----eecCCC
Q 007199 540 -DFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 540 -~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
..+||||++|+-+|..+|... ...+++..+.++. ..||.|+|+..|+|||+| |+.+||
T Consensus 96 r~t~ylVf~~cehDLaGlLsn~-----~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dg 161 (376)
T KOG0669|consen 96 RATFYLVFDFCEHDLAGLLSNR-----KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDG 161 (376)
T ss_pred cceeeeeHHHhhhhHHHHhcCc-----cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCc
Confidence 358999999999999999753 2344444444444 499999999999999999 777776
No 399
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.28 E-value=1.3e-12 Score=133.82 Aligned_cols=124 Identities=19% Similarity=0.139 Sum_probs=99.2
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+..+||+|+||+|.++. +.+.+.+|||++++. ..+--..|-++|.-..+-|.+++++.+|++-+.+|+||
T Consensus 350 DFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVM 429 (683)
T KOG0696|consen 350 DFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVM 429 (683)
T ss_pred ccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEE
Confidence 48899999999999999974 667788999999872 33344566666755567889999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
||+. |+|...|++.. .+.+..+..+.. .||-+||+++||.|||| +|+++||
T Consensus 430 EyvnGGDLMyhiQQ~G------kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGH 488 (683)
T KOG0696|consen 430 EYVNGGDLMYHIQQVG------KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGH 488 (683)
T ss_pred EEecCchhhhHHHHhc------ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCc
Confidence 9999 69999998754 233333433333 68999999999999999 7777775
No 400
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.28 E-value=2.6e-12 Score=125.82 Aligned_cols=123 Identities=19% Similarity=0.200 Sum_probs=94.2
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
++....||+|+.|+|+++ .+.+|..+|||.+++.. .+.....++++...-..|.||+.+|||..+..++|.||.|
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM 173 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM 173 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH
Confidence 566778999999999997 47889999999999743 3356677777766646899999999999999999999999
Q ss_pred CccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhc-CCceeeccceecCCCcCcceee
Q 007199 550 TCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLP-VMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 550 ~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~-~~iiHrDlKllh~dg~PsniLl 609 (613)
.-.+..+|+.- ...+++..+-.+.. .||.||-. ++||||| .|||||||
T Consensus 174 s~C~ekLlkri-----k~piPE~ilGk~tva~v~AL~YLKeKH~viHRD-------vKPSNILl 225 (391)
T KOG0983|consen 174 STCAEKLLKRI-----KGPIPERILGKMTVAIVKALYYLKEKHGVIHRD-------VKPSNILL 225 (391)
T ss_pred HHHHHHHHHHh-----cCCchHHhhhhhHHHHHHHHHHHHHhcceeecc-------cCccceEE
Confidence 86666666652 33466655555444 78888854 4666655 56888887
No 401
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.27 E-value=4.5e-13 Score=144.65 Aligned_cols=117 Identities=23% Similarity=0.261 Sum_probs=98.1
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
+.|.+...+|+|.||.|||+ .+.+++..|||.++.+ .....+.|+-++..+ +|||||.++|.|...+..++.|||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc-~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDC-RHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecC-CCcChHHHHhhhhhhcCcEEEEEe
Confidence 45899999999999999997 5888999999999874 334567888666556 999999999999999999999999
Q ss_pred CC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 549 CT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|. |+|.+.-+. ...+.+.++...+. ++++|||+++.+|||||
T Consensus 94 cgggslQdiy~~------TgplselqiayvcRetl~gl~ylhs~gk~hRdiK 139 (829)
T KOG0576|consen 94 CGGGSLQDIYHV------TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIK 139 (829)
T ss_pred cCCCcccceeee------cccchhHHHHHHHhhhhccchhhhcCCccccccc
Confidence 99 699887764 33555666655555 89999999999999999
No 402
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.26 E-value=2.8e-11 Score=121.07 Aligned_cols=110 Identities=20% Similarity=0.128 Sum_probs=85.3
Q ss_pred cCceEEEEE-EeeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-ccHHHHHHHhc
Q 007199 484 GSNGTVVLE-GNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CSLNDLIYVLS 561 (613)
Q Consensus 484 G~fG~Vyk~-~~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-GsL~~~L~~~~ 561 (613)
|.||.||++ ...+++.+|+|+++... .+.+|...+... .||||+++++++...+..+++|||++ |+|.+++....
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~--~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~ 80 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS--EYSRERLTIIPH-CVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFL 80 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh--hhhhHHHHHHhc-CCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhc
Confidence 899999997 57889999999998642 334455455455 79999999999999999999999999 69999997542
Q ss_pred CCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 562 GSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
.++...+..++. .++.|||+.+++||||| ++..++
T Consensus 81 ------~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~ 122 (237)
T cd05576 81 ------NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG 122 (237)
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC
Confidence 245555544443 89999999999888877 454444
No 403
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.26 E-value=4e-12 Score=126.01 Aligned_cols=120 Identities=18% Similarity=0.155 Sum_probs=94.5
Q ss_pred cCceEEE-eeeEeecCceEEEEE-EeeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEe----CCEEEE
Q 007199 471 IGKLVVF-NKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESD----QDFVYL 544 (613)
Q Consensus 471 i~~~~~~-~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~----~~~~~L 544 (613)
|.+.|.+ .++||-|-.|+|..| ++.+|+.+|+|.+.. .....+|++.....-.|||||+++++|.. ..++++
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D--s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLi 136 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD--SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLI 136 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc--CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEe
Confidence 3334543 478999999999997 689999999998874 34667888766565699999999998874 458999
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHH---HHHHHHHHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQ---DSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~---~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
|||+|+ |.|+..++.++ ...+.+.. +++.+..|+.|||+.+|.|||+|
T Consensus 137 VmE~meGGeLfsriq~~g----~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlK 188 (400)
T KOG0604|consen 137 VMECMEGGELFSRIQDRG----DQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLK 188 (400)
T ss_pred eeecccchHHHHHHHHcc----cccchHHHHHHHHHHHHHHHHHHHhcchhhccCC
Confidence 999999 69999999863 33344444 44445589999999999999998
No 404
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.25 E-value=2.6e-11 Score=121.42 Aligned_cols=109 Identities=24% Similarity=0.193 Sum_probs=88.7
Q ss_pred EeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-cc
Q 007199 481 IAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CS 552 (613)
Q Consensus 481 LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-Gs 552 (613)
||+|+||.||++. ..+++.+|+|++... ..+.+.+|++++.++ +||||+++++.+...+..+++|||++ ++
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 79 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRI-NHPFIVKLHYAFQTEEKLYLVLEYAPGGE 79 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHc-CCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence 6899999999974 456899999998863 234788999888777 99999999999999999999999997 69
Q ss_pred HHHHHHHhcCCCccccCCHHHHHHH---HHHHHHHHhcCCceeeccc
Q 007199 553 LNDLIYVLSGSFEEQLNAKEQDSNL---LNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 553 L~~~L~~~~~~~~~~~~~~~~~~~~---~~~~l~~Lh~~~iiHrDlK 596 (613)
|.+++.... .++......+ +..++.++|..+++|+|+|
T Consensus 80 L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~ 120 (250)
T cd05123 80 LFSHLSKEG------RFSEERARFYAAEIVLALEYLHSLGIIYRDLK 120 (250)
T ss_pred HHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 999998542 3444444443 3389999999999888777
No 405
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.25 E-value=2.7e-11 Score=116.87 Aligned_cols=134 Identities=19% Similarity=0.147 Sum_probs=100.6
Q ss_pred ccCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec-cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 470 RIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 470 ~i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~-~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
.+...|.+.+.||+|+||.+|.+ .+.+|+.||+|.=.. .....+..|..+...+.....|..++.+..+.++-.||||
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 44455999999999999999997 588999999997665 3445777888777666445788888889999999999999
Q ss_pred CCCccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccceecCCCcCcceeeecc
Q 007199 548 RCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLKVT 612 (613)
Q Consensus 548 ~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlKllh~dg~PsniLlkl~ 612 (613)
++..||.++..-+.+.+.. ...-..+.+++.-++|+|..+.||||| ||+|+||.|-
T Consensus 92 LLGPsLEdLfnfC~R~ftm--kTvLMLaDQml~RiEyvH~r~fiHRDI-------KPdNFLMGlg 147 (341)
T KOG1163|consen 92 LLGPSLEDLFNFCSRRFTM--KTVLMLADQMLSRIEYVHLRNFIHRDI-------KPDNFLMGLG 147 (341)
T ss_pred ccCccHHHHHHHHhhhhhH--HhHHHHHHHHHHHHHHHHhhccccccC-------Cccceeeccc
Confidence 9998998888876542221 122233444446788999998876654 6888887653
No 406
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.24 E-value=6.9e-12 Score=130.36 Aligned_cols=126 Identities=22% Similarity=0.146 Sum_probs=104.5
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
+.|..-++||+|+||.||-|. ..+|+.+|.|++.+. ......+|-++|.+. +.+.||.+--.|++.+.+|||
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV-~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKV-SSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHh-ccCcEEEEeeeecCCCceEEE
Confidence 347888999999999999874 789999999988753 344678898889877 999999999999999999999
Q ss_pred ecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCc
Q 007199 546 LERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 546 ~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
|..|. |||.-+|... ....+++..+..+.. .||.|||+..|+.||+| ||+.+||
T Consensus 264 LtlMNGGDLkfHiyn~----g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~Gh 325 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNH----GNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGH 325 (591)
T ss_pred EEeecCCceeEEeecc----CCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCC
Confidence 99999 6999998876 335677766666555 89999999999999887 5555554
No 407
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.22 E-value=8e-11 Score=114.12 Aligned_cols=109 Identities=18% Similarity=0.053 Sum_probs=75.0
Q ss_pred eeeEeecCceEEEEEEeeCCcEEEEEEeeccc-----------------------------hHHHHHHHHHHHhcCCCCc
Q 007199 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-----------------------------HDVALKEIQNLIASDQHPN 528 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~-----------------------------~~~~~~Ei~~L~~l~~Hpn 528 (613)
...||+|+||+||++...+|+.||||+++... ...+.+|.+.+.++ .|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRL-YEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHH-HhCC
Confidence 45799999999999865589999999988531 11235788888887 8888
Q ss_pred ceeEEEEEEeCCEEEEEecCCCc-cHHH-HHHHhcCCCccccCCHHH---HHHHHHHHHHHHhc-CCceeeccc
Q 007199 529 IVRWYGVESDQDFVYLSLERCTC-SLND-LIYVLSGSFEEQLNAKEQ---DSNLLNEVRIRLLP-VMENTKDIE 596 (613)
Q Consensus 529 IV~l~g~~~~~~~~~LV~E~~~G-sL~~-~L~~~~~~~~~~~~~~~~---~~~~~~~~l~~Lh~-~~iiHrDlK 596 (613)
+.....+.... .+|||||++| ++.. .+... ..+... +...++.++.++|. .+++|||+|
T Consensus 81 i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlk 145 (190)
T cd05145 81 VPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDV-------PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLS 145 (190)
T ss_pred CCCceEEEecC--CEEEEEEecCCCchhhhhhhc-------cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCC
Confidence 76555444332 4899999996 4433 34321 222223 33334489999999 999887776
No 408
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.21 E-value=9.6e-11 Score=115.92 Aligned_cols=114 Identities=10% Similarity=-0.068 Sum_probs=87.4
Q ss_pred ccCceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeeccc--hH----------HHHHHHHHHHhcCCCCcceeEEEEEE
Q 007199 470 RIGKLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HD----------VALKEIQNLIASDQHPNIVRWYGVES 537 (613)
Q Consensus 470 ~i~~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~--~~----------~~~~Ei~~L~~l~~HpnIV~l~g~~~ 537 (613)
.+..+|...++||.|+||.||+... ++..+|+|.++.+. .+ .+.+|++.+.++ .|++|..+..++.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL-~~~GI~~~~d~~~ 105 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRV-RSEGLASLNDFYL 105 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHH-HHCCCCcceEeee
Confidence 4456799999999999999999654 57789999997521 11 267999889888 9999999998876
Q ss_pred eC--------CEEEEEecCCCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 538 DQ--------DFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 538 ~~--------~~~~LV~E~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
.. ...+|+|||++| +|.++.. ..+. ....+..++.++|+.+++|||+|
T Consensus 106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~~-~~~~i~~~l~~lH~~gi~H~Dik 162 (232)
T PRK10359 106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISED-VKAKIKASIESLHQHGMVSGDPH 162 (232)
T ss_pred ecccccccccCCeEEEEEEECCccHHHhhh----------ccHH-HHHHHHHHHHHHHHcCCccCCCC
Confidence 44 358899999997 8977742 1122 23344589999999999877665
No 409
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.20 E-value=1.6e-11 Score=122.94 Aligned_cols=124 Identities=17% Similarity=0.090 Sum_probs=103.5
Q ss_pred eEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeec------cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVK------THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~------~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.+..+||+|+|.+|..+. ..+.+.+|+|++++ +..+.++.|-.+..+..+||.+|-++.+|.+...+++|.
T Consensus 251 df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffvi 330 (593)
T KOG0695|consen 251 DFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFVI 330 (593)
T ss_pred cceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEEE
Confidence 38899999999999999964 78889999999987 344567777777777779999999999999999999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCCc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANGH 603 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg~ 603 (613)
||++ |+|.-++++.+ .++++.+..+.. .+|+|||+.+||.||+| |++..|+
T Consensus 331 eyv~ggdlmfhmqrqr------klpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaegh 389 (593)
T KOG0695|consen 331 EYVNGGDLMFHMQRQR------KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGH 389 (593)
T ss_pred EEecCcceeeehhhhh------cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCc
Confidence 9999 69988887654 456666555444 79999999999999999 6676664
No 410
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.18 E-value=7.3e-12 Score=122.62 Aligned_cols=124 Identities=12% Similarity=0.102 Sum_probs=97.3
Q ss_pred cccCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeecc--chHHHHHHHHHHHhcCCCCcceeEEE-EEEeCCEEEE
Q 007199 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKT--HHDVALKEIQNLIASDQHPNIVRWYG-VESDQDFVYL 544 (613)
Q Consensus 469 ~~i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~--~~~~~~~Ei~~L~~l~~HpnIV~l~g-~~~~~~~~~L 544 (613)
..+.+.|.+.+.||+|.||.+.++ ++.+.+.+++|.+.+. ...+|.+|...=-.+..|.||+.-|+ .|+..+.+.+
T Consensus 20 v~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF 99 (378)
T KOG1345|consen 20 VDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVF 99 (378)
T ss_pred cchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEE
Confidence 344456899999999999999997 5888899999999873 44589999855445568999998775 6788889999
Q ss_pred EecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 545 SLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++||++ |||..-+... .-.......+...+..|+.|+|+++++|||||
T Consensus 100 ~qE~aP~gdL~snv~~~----GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK 148 (378)
T KOG1345|consen 100 VQEFAPRGDLRSNVEAA----GIGEANTKKVFAQLLSAIEFMHSKNLVHRDLK 148 (378)
T ss_pred eeccCccchhhhhcCcc----cccHHHHHHHHHHHHHHHHHhhccchhhcccc
Confidence 999999 9998877542 12222334455555599999999999999998
No 411
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.17 E-value=2.1e-10 Score=118.73 Aligned_cols=117 Identities=15% Similarity=0.120 Sum_probs=78.1
Q ss_pred ceEEEeeeEeecCceEEEEEEe-eC---CcEEEEEEeeccch----H----------HHHHHHHHHHhcCCCCcceeEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN-YE---GRSVAVKRLVKTHH----D----------VALKEIQNLIASDQHPNIVRWYG 534 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~-~~---g~~VAVK~l~~~~~----~----------~~~~Ei~~L~~l~~HpnIV~l~g 534 (613)
+.|.+.+.||+|+||+||++.. .+ +..+|+|....... + ....+...+.. ..|+||+++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~h~~i~~~~~ 90 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHN-IDHLGIPKYYG 90 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhcc-CCCCCCCcEEE
Confidence 5699999999999999999753 33 45667775432111 0 11122223333 48999999999
Q ss_pred EEEeCC----EEEEEecCCCccHHHHHHHhcCCCccccCCHH---HHHHHHHHHHHHHhcCCceeeccc
Q 007199 535 VESDQD----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKE---QDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 535 ~~~~~~----~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~---~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++.... ..++++|++..++.+.+.... ..++. .+...++.++.|||+.+++|||||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiK 153 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVENTKEIFKRIK------CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIK 153 (294)
T ss_pred eeeEecCCceEEEEEEehhccCHHHHHHhhc------cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 876554 458899988877777776432 12222 334444599999999998887776
No 412
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.17 E-value=1.9e-11 Score=126.54 Aligned_cols=122 Identities=21% Similarity=0.152 Sum_probs=100.8
Q ss_pred cccCceEEEeeeEeecCceEEEEEE-ee---CCcEEEEEEeec-cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 469 RRIGKLVVFNKEIAKGSNGTVVLEG-NY---EGRSVAVKRLVK-THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 469 ~~i~~~~~~~~~LG~G~fG~Vyk~~-~~---~g~~VAVK~l~~-~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
..+.+.|...++||+|.|++||++. .. ..+.||+|.+.. +......+|++.|..+..+.||+++.+++..++.+.
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ 111 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA 111 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence 3444568889999999999999973 22 567899999886 566789999999999999999999999999999999
Q ss_pred EEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 544 LSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+||||++ -+-.++.... ......|..+.+..||.++|..+|||||+|
T Consensus 112 ivlp~~~H~~f~~l~~~l------~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiK 159 (418)
T KOG1167|consen 112 IVLPYFEHDRFRDLYRSL------SLAEIRWYLRNLLKALAHLHKNGIVHRDIK 159 (418)
T ss_pred EEecccCccCHHHHHhcC------CHHHHHHHHHHHHHHhhhhhccCccccCCC
Confidence 9999999 5777777632 233345666666699999999999988876
No 413
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.17 E-value=3.2e-11 Score=123.40 Aligned_cols=129 Identities=18% Similarity=0.092 Sum_probs=101.4
Q ss_pred ccCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec--cchHHHHHHHHHHHhcCCC-C----cceeEEEEEEeCCE
Q 007199 470 RIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK--THHDVALKEIQNLIASDQH-P----NIVRWYGVESDQDF 541 (613)
Q Consensus 470 ~i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~--~~~~~~~~Ei~~L~~l~~H-p----nIV~l~g~~~~~~~ 541 (613)
.+..+|.+...+|+|.||.|..+ ....+..||||+++. ..++...-|++.|.++..+ | -+|.+.++|...++
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 33566999999999999999997 455689999999986 5566788899999888333 2 47888999999999
Q ss_pred EEEEecCCCccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceeeccceecCCCcCcceee
Q 007199 542 VYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 542 ~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHrDlKllh~dg~PsniLl 609 (613)
+|||+|.+.-|++++|+.+ ....++.+.+. .++++++.+||+.+ |+|.|.||+|||+
T Consensus 166 iCivfellG~S~~dFlk~N----~y~~fpi~~ir~m~~QL~~sv~fLh~~k-------l~HTDLKPENILf 225 (415)
T KOG0671|consen 166 ICIVFELLGLSTFDFLKEN----NYIPFPIDHIRHMGYQLLESVAFLHDLK-------LTHTDLKPENILF 225 (415)
T ss_pred eEEEEeccChhHHHHhccC----CccccchHHHHHHHHHHHHHHHHHHhcc-------eeecCCChheEEE
Confidence 9999999988999999875 33445555444 44458888887654 5667788999887
No 414
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.15 E-value=2.4e-10 Score=111.03 Aligned_cols=106 Identities=14% Similarity=0.047 Sum_probs=78.8
Q ss_pred EEeeeEeecCceEEEEEEeeCCcEEEEEEeeccch--H-----HHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 476 VFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH--D-----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 476 ~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~~--~-----~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.....|++|+||+||.+.. .++.++.+.+..... . .+.+|+++|.++..|+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3567899999999998655 777888777764221 2 578999999998566889999886 446999999
Q ss_pred CCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 549 CTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+.| +|.+.+.. . .. .....+..++.++|+.+|+|||||
T Consensus 80 I~G~~L~~~~~~-------~--~~-~~~~qi~~~L~~lH~~GIvHrDL~ 118 (218)
T PRK12274 80 LAGAAMYQRPPR-------G--DL-AYFRAARRLLQQLHRCGVAHNDLA 118 (218)
T ss_pred ecCccHHhhhhh-------h--hH-HHHHHHHHHHHHHHHCcCccCCCC
Confidence 997 77654321 0 11 233444589999999999999994
No 415
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.15 E-value=5.4e-10 Score=109.46 Aligned_cols=116 Identities=32% Similarity=0.412 Sum_probs=93.5
Q ss_pred EEEeeeEeecCceEEEEEEe-eCCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVLEGN-YEGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~-~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
|...+.||+|++|.||++.. .+++.+|+|.+... ..+.+.+|++.+.++ +|+|++++++++...+..++++||+
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~-~~~~i~~~~~~~~~~~~~~~v~e~~ 79 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKL-KHPNIVKLYGVFEDPEPLYLVMEYC 79 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhC-CCCChhhheeeeecCCceEEEEecc
Confidence 35678899999999999754 45889999999864 456888999999888 9999999999999999999999999
Q ss_pred Cc-cHHHHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 550 TC-SLNDLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
+| +|.+++..... .+.......++ ..++.+||..+++|+|++
T Consensus 80 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~ 125 (225)
T smart00221 80 EGGDLFDYLRKKGG-----KLSEEEARFYLRQILEALEYLHSLGIVHRDLK 125 (225)
T ss_pred CCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence 95 99999986431 03444433333 388999999998888776
No 416
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.15 E-value=1.2e-10 Score=132.46 Aligned_cols=129 Identities=21% Similarity=0.194 Sum_probs=99.3
Q ss_pred ceEEEeeeEeecCceEEEEEE---ee-----CCcEEEEEEeecc----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG---NY-----EGRSVAVKRLVKT----HHDVALKEIQNLIASDQHPNIVRWYGVESDQD 540 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~---~~-----~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~ 540 (613)
+.+.+.+.||+|.||.|+++. .. ....||||.++.. ..+.+..|+++|+.+..|+||+.++|+|...+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 335667799999999999973 11 1457999999862 34589999999999999999999999999999
Q ss_pred EEEEEecCCC-ccHHHHHHHhc-C-CCccc--------cCCHHHH---HHHHHHHHHHHhcCCceeeccc----eecCC
Q 007199 541 FVYLSLERCT-CSLNDLIYVLS-G-SFEEQ--------LNAKEQD---SNLLNEVRIRLLPVMENTKDIE----LWKAN 601 (613)
Q Consensus 541 ~~~LV~E~~~-GsL~~~L~~~~-~-~~~~~--------~~~~~~~---~~~~~~~l~~Lh~~~iiHrDlK----llh~d 601 (613)
..++|+|||. |+|.++|+.++ . ..... .+..... ..++..||.||++..++|||+- |++.+
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKN 454 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCC
Confidence 9999999999 99999999876 0 00111 1333333 3333389999999999999997 55554
No 417
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.14 E-value=1.3e-11 Score=118.22 Aligned_cols=118 Identities=14% Similarity=0.051 Sum_probs=93.9
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeCC--EEEEEecCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQD--FVYLSLERC 549 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~--~~~LV~E~~ 549 (613)
+.|++.+.+|+|.|+.|+.+. ..+.+.++||++++-..+...+|+.+|..+..||||++|++...+.. ...||+||+
T Consensus 38 ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v 117 (338)
T KOG0668|consen 38 DDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYV 117 (338)
T ss_pred chHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhh
Confidence 348889999999999999974 67788999999999888899999999999978999999999998765 567999999
Q ss_pred Cc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 550 TC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
.. +...+-.. ..-.........+..||.|+|+++|+|||+|
T Consensus 118 ~n~Dfk~ly~t------l~d~dIryY~~elLkALdyCHS~GImHRDVK 159 (338)
T KOG0668|consen 118 NNTDFKQLYPT------LTDYDIRYYIYELLKALDYCHSMGIMHRDVK 159 (338)
T ss_pred ccccHHHHhhh------hchhhHHHHHHHHHHHHhHHHhcCcccccCC
Confidence 94 54443332 1122333444444589999999999988876
No 418
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.12 E-value=9.4e-10 Score=105.57 Aligned_cols=110 Identities=32% Similarity=0.430 Sum_probs=89.7
Q ss_pred EeecCceEEEEEEe-eCCcEEEEEEeeccch----HHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC-ccHH
Q 007199 481 IAKGSNGTVVLEGN-YEGRSVAVKRLVKTHH----DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT-CSLN 554 (613)
Q Consensus 481 LG~G~fG~Vyk~~~-~~g~~VAVK~l~~~~~----~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~-GsL~ 554 (613)
||+|.+|.||++.. .+++.+++|++..... +.+.+|++.+..+ +|++|+++++++......+++||+++ ++|.
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 79 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHPNIVKLYGVFEDENHLYLVMEYCEGGSLK 79 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhc-CCCCeeeEeeeeecCCeEEEEEecCCCCcHH
Confidence 68999999999754 3489999999997543 6899999999887 99999999999999999999999999 6999
Q ss_pred HHHHHhcCCCccccCCHHHHHHHH---HHHHHHHhcCCceeeccc
Q 007199 555 DLIYVLSGSFEEQLNAKEQDSNLL---NEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 555 ~~L~~~~~~~~~~~~~~~~~~~~~---~~~l~~Lh~~~iiHrDlK 596 (613)
+++.... ...+......++ ..++.+||..+++|+|++
T Consensus 80 ~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~ 119 (215)
T cd00180 80 DLLKENE-----GKLSEDEILRILLQILEGLEYLHSNGIIHRDLK 119 (215)
T ss_pred HHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 9998641 223343333333 389999999999888777
No 419
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.08 E-value=7.1e-10 Score=108.85 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=83.6
Q ss_pred eeEeecCceEEEEEEeeCCcEEEEEEeeccc-----------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-----------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~-----------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
+.||+|++|.||++.. .|..|++|...... ...+.+|++++..+ .|++|.....++...+..+++||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRA-RKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHH-HHCCCCCCeEEEEeCCCCEEEEE
Confidence 5789999999999754 78889999765421 12577899888887 89999888888888888999999
Q ss_pred CCCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 548 RCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 548 ~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
|++| +|.+++.... . ....+...+..++.++|..+++|+|++
T Consensus 80 ~~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~ 122 (211)
T PRK14879 80 YIEGEPLKDLINSNG------M-EELELSREIGRLVGKLHSAGIIHGDLT 122 (211)
T ss_pred EeCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHHhCCcccCCCC
Confidence 9996 9999987531 1 233444444589999999998776665
No 420
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.05 E-value=5.4e-10 Score=125.99 Aligned_cols=121 Identities=12% Similarity=0.038 Sum_probs=75.3
Q ss_pred ceEEEeeeEeecCceEEEEEE-eeC----CcEEEEEEeeccchHH-HHHHHHHHHhcCCCCcceeEEEE------EEeCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEG-NYE----GRSVAVKRLVKTHHDV-ALKEIQNLIASDQHPNIVRWYGV------ESDQD 540 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~-~~~----g~~VAVK~l~~~~~~~-~~~Ei~~L~~l~~HpnIV~l~g~------~~~~~ 540 (613)
+.|...+.||+|+||.||++. ..+ +..||||++......+ +..| .+... .+.++..+... ....+
T Consensus 132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e--~l~~~-~~~~~~~~~~~~~~~~~~~~~~ 208 (566)
T PLN03225 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNE--RVRRA-CPNSCADFVYGFLEPVSSKKED 208 (566)
T ss_pred CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHH--HHHhh-chhhHHHHHHhhhcccccccCC
Confidence 348999999999999999985 455 7899999987533222 2222 12122 22333222211 23556
Q ss_pred EEEEEecCCC-ccHHHHHHHhcCCCc--------------cccCCH---HHHHHHHHHHHHHHhcCCceeeccc
Q 007199 541 FVYLSLERCT-CSLNDLIYVLSGSFE--------------EQLNAK---EQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 541 ~~~LV~E~~~-GsL~~~L~~~~~~~~--------------~~~~~~---~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
..+|||||++ |+|.++++....... ...... ..+...++.+|.|||+.+|+|||||
T Consensus 209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLK 282 (566)
T PLN03225 209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVK 282 (566)
T ss_pred ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCC
Confidence 8999999999 699999975320000 000001 1233344489999999999887776
No 421
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.03 E-value=1.5e-09 Score=122.03 Aligned_cols=109 Identities=16% Similarity=0.116 Sum_probs=81.1
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcEEEEEEee-cc----------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEE
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLV-KT----------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVY 543 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~-~~----------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~ 543 (613)
|...+.||+|+||+||++.. .+..+++|+.. +. ..+.+.+|++++..+ +|++++....++...+..+
T Consensus 335 ~~~~~~iG~G~~g~Vy~~~~-~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~ 412 (535)
T PRK09605 335 KIPDHLIGKGAEADIKKGEY-LGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEA-RRAGVPTPVIYDVDPEEKT 412 (535)
T ss_pred cCccceeccCCcEEEEEEee-cCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhh-cccCCCeeEEEEEeCCCCE
Confidence 45578899999999999643 44445554322 11 123578999999887 9999999888888888889
Q ss_pred EEecCCCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 544 LSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 544 LV~E~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
+||||++| +|.+++... ..+.+.+..++.+||+.+++|||+|
T Consensus 413 lv~E~~~g~~L~~~l~~~-----------~~~~~~i~~~L~~lH~~giiHrDlk 455 (535)
T PRK09605 413 IVMEYIGGKDLKDVLEGN-----------PELVRKVGEIVAKLHKAGIVHGDLT 455 (535)
T ss_pred EEEEecCCCcHHHHHHHH-----------HHHHHHHHHHHHHHHhCCCccCCCC
Confidence 99999994 999988631 2344455589999999998776665
No 422
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.03 E-value=1.3e-09 Score=105.93 Aligned_cols=105 Identities=17% Similarity=0.143 Sum_probs=78.6
Q ss_pred eEeecCceEEEEEEeeCCcEEEEEEeecc-----c------hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 480 EIAKGSNGTVVLEGNYEGRSVAVKRLVKT-----H------HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 480 ~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~-----~------~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.||+|+||.||++. .+|..|++|..... . .+.+.+|++++..+ +|+++....-++...+..+++|||
T Consensus 1 ~ig~G~~~~vy~~~-~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGD-FLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRA-RKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEee-cCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHH-HHCCCCCCEEEEEECCCCEEEEEE
Confidence 47999999999975 67889999986531 1 13567899998887 887766666666677778999999
Q ss_pred CCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 549 CTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++| +|.+++.... . .+...+..++.++|..+++|+|++
T Consensus 79 ~~g~~l~~~~~~~~----~------~~~~~i~~~l~~lH~~gi~H~Dl~ 117 (199)
T TIGR03724 79 IEGKPLKDVIEEGN----D------ELLREIGRLVGKLHKAGIVHGDLT 117 (199)
T ss_pred ECCccHHHHHhhcH----H------HHHHHHHHHHHHHHHCCeecCCCC
Confidence 995 9998886421 0 344445589999999988766665
No 423
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=2.1e-11 Score=119.33 Aligned_cols=114 Identities=18% Similarity=0.195 Sum_probs=89.1
Q ss_pred EEeeeEeecCceEEEEE-EeeCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCC-----EEEE
Q 007199 476 VFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESDQD-----FVYL 544 (613)
Q Consensus 476 ~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~-----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~-----~~~L 544 (613)
+-.+.||-|+||.||.. +-.+|+.||.|++.. ...+.+.+|+.+|... +|.|++..++...... ++|+
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfF-kHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSF-RHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhh-ccccHHHHHHhcCCCCchHHHHHHH
Confidence 34568999999999985 567899999999875 2445788999888777 9999999988776543 6889
Q ss_pred EecCCCccHHHHHHHhcCCCccccCCHHHHHH---HHHHHHHHHhcCCceeeccc
Q 007199 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSN---LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~---~~~~~l~~Lh~~~iiHrDlK 596 (613)
++|+|..+|...|-. ...+.-+.+.- .+.+||+|||+.+|.|||||
T Consensus 135 ~TELmQSDLHKIIVS------PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIK 183 (449)
T KOG0664|consen 135 LTELMQSDLHKIIVS------PQALTPDHVKVFVYQILRGLKYLHTANILHRDIK 183 (449)
T ss_pred HHHHHHhhhhheecc------CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCC
Confidence 999999999888763 23333333333 33389999999999998888
No 424
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.02 E-value=3.7e-11 Score=126.37 Aligned_cols=126 Identities=20% Similarity=0.173 Sum_probs=98.1
Q ss_pred EEEeeeEeecCceEEEEEE-eeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEG-NYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~-~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E 547 (613)
++....||-|+||.|-+.. ......+|+|++++. ..+.+..|-++|+.+ +.|.||++|..|.++.++|++||
T Consensus 422 l~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~-~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 422 LKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMEC-RSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhc-CchHHHHHHHHhccchhhhhhHH
Confidence 5556679999999999854 333335899999873 234677888899888 89999999999999999999999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc----eecCCCcC
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE----LWKANGHP 604 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg~P 604 (613)
-|- |.|+..|+.+. ............++.+|+.|||+++||.|||| +|+.+|.+
T Consensus 501 aClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~ 559 (732)
T KOG0614|consen 501 ACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYL 559 (732)
T ss_pred hhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCce
Confidence 998 69999998753 11112223344444599999999999999998 77777765
No 425
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.01 E-value=3.5e-10 Score=122.77 Aligned_cols=121 Identities=24% Similarity=0.179 Sum_probs=93.3
Q ss_pred cCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTHHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
..+.|.+...+|.|+|+.|-++ ...+++..|||++.+. ..+..+|+.++....+||||+++.+.+.+..+.|+|||++
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~-~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l 398 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR-ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELL 398 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc-ccccccccchhhhhcCCCcceeecceecCCceeeeeehhc
Confidence 3455888888999999999986 5788999999999875 4456677777777779999999999999999999999999
Q ss_pred Cc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 550 TC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 550 ~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
.| -|.+.+...+ ........|+.. +..++.|||.++++|||+|
T Consensus 399 ~g~ell~ri~~~~---~~~~e~~~w~~~-lv~Av~~LH~~gvvhRDLk 442 (612)
T KOG0603|consen 399 DGGELLRRIRSKP---EFCSEASQWAAE-LVSAVDYLHEQGVVHRDLK 442 (612)
T ss_pred cccHHHHHHHhcc---hhHHHHHHHHHH-HHHHHHHHHhcCeeecCCC
Confidence 94 6666665432 111111124333 3389999999999988876
No 426
>smart00090 RIO RIO-like kinase.
Probab=98.99 E-value=8.3e-10 Score=110.83 Aligned_cols=115 Identities=17% Similarity=-0.010 Sum_probs=76.9
Q ss_pred eEEEeeeEeecCceEEEEEE--eeCCcEEEEEEeeccch---------------------------HHHHHHHHHHHhcC
Q 007199 474 LVVFNKEIAKGSNGTVVLEG--NYEGRSVAVKRLVKTHH---------------------------DVALKEIQNLIASD 524 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~--~~~g~~VAVK~l~~~~~---------------------------~~~~~Ei~~L~~l~ 524 (613)
.|.+.+.||+|+||.||+|. ..+|+.||||+++.... ..+.+|++++.++
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L- 107 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL- 107 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH-
Confidence 37788899999999999986 67899999999874210 1356899999888
Q ss_pred CC--CcceeEEEEEEeCCEEEEEecCCCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCC-ceeeccc
Q 007199 525 QH--PNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVM-ENTKDIE 596 (613)
Q Consensus 525 ~H--pnIV~l~g~~~~~~~~~LV~E~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~-iiHrDlK 596 (613)
.+ ..+.+++++ ...+|||||++| +|...+.... .........+...+..++.+||..+ ++|||+|
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dik 176 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLYKEGELVHGDLS 176 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCC
Confidence 54 234444443 234899999997 6655442211 1111111233344448999999999 8777665
No 427
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=98.99 E-value=3.4e-10 Score=113.52 Aligned_cols=126 Identities=25% Similarity=0.254 Sum_probs=96.7
Q ss_pred cCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec-----cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCC----
Q 007199 471 IGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-----THHDVALKEIQNLIASDQHPNIVRWYGVESDQD---- 540 (613)
Q Consensus 471 i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~-----~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~---- 540 (613)
+..+|.-.+.+|.|.- .|.-+ +.-.++.||+|.+.. .+.+...+|...+..+ .|+||++++.+|....
T Consensus 15 v~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v-~~~nii~l~n~ftP~~~l~~ 92 (369)
T KOG0665|consen 15 VPKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCV-NHKNIISLLNVFTPQKTLEE 92 (369)
T ss_pred eeeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhh-cccceeeeeeccCccccHHH
Confidence 3345888888999887 55544 466788999998765 2445788999766555 9999999999998654
Q ss_pred --EEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccceecCCCcCcceeee
Q 007199 541 --FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610 (613)
Q Consensus 541 --~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlKllh~dg~PsniLlk 610 (613)
+.|+|||||.++|.++++. +........+....+.|++|+|+.+|+|| |.||+||+++
T Consensus 93 ~~e~y~v~e~m~~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs~~IihR-------dLkPsnivv~ 152 (369)
T KOG0665|consen 93 FQEVYLVMELMDANLCQVILM-----ELDHETISYILYQMLCGIKHLHSAGIIHR-------DLKPSNIVVN 152 (369)
T ss_pred HHhHHHHHHhhhhHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHhcceeec-------ccCcccceec
Confidence 5899999999999999884 33344445555555589999999999887 5578888875
No 428
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=98.96 E-value=5.2e-09 Score=103.29 Aligned_cols=105 Identities=30% Similarity=0.374 Sum_probs=85.6
Q ss_pred CceEEEEEEe-eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCCc-cHHHHHH
Q 007199 485 SNGTVVLEGN-YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIY 558 (613)
Q Consensus 485 ~fG~Vyk~~~-~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~G-sL~~~L~ 558 (613)
+||.||++.. .+|+.+|+|++.... .+.+.+|++.+.++ +|+||+++++++......++++||+++ +|.+++.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~ 79 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL-KHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK 79 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC-CCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence 5899999854 468999999998632 57899999988888 999999999999999999999999995 9999997
Q ss_pred HhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 559 VLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
... .++......++. .++.+||..+++|+|++
T Consensus 80 ~~~------~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~ 114 (244)
T smart00220 80 KRG------RLSEDEARFYARQILSALEYLHSNGIIHRDLK 114 (244)
T ss_pred hcc------CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcC
Confidence 642 144444444433 89999999999888877
No 429
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=98.95 E-value=1.5e-09 Score=114.83 Aligned_cols=127 Identities=17% Similarity=0.133 Sum_probs=98.3
Q ss_pred ceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeeccc--hHHHHHHHHHHHhcC-----CCCcceeEEEEEEeCCEEEE
Q 007199 473 KLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVKTH--HDVALKEIQNLIASD-----QHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~~~--~~~~~~Ei~~L~~l~-----~HpnIV~l~g~~~~~~~~~L 544 (613)
..|.+....|+|-|++|..| ...-|..||||+|+... .+.-++|+++|.++- .--|+++|+..|...+++||
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLCl 511 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCL 511 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEE
Confidence 56888888999999999997 46667899999999743 346678999999881 12489999999999999999
Q ss_pred EecCCCccHHHHHHHhcCCCccccCCHHHH---HHHHHHHHHHHhcCCceeeccceecCCCcCcceee
Q 007199 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQD---SNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 545 V~E~~~GsL~~~L~~~~~~~~~~~~~~~~~---~~~~~~~l~~Lh~~~iiHrDlKllh~dg~PsniLl 609 (613)
|+|-+.-+|.++|+..+ ..-.+.+..+ ..++..||.+|-..+|+|. |+||.|||+
T Consensus 512 VFE~LslNLRevLKKyG---~nvGL~ikaVRsYaqQLflALklLK~c~vlHa-------DIKPDNiLV 569 (752)
T KOG0670|consen 512 VFEPLSLNLREVLKKYG---RNVGLHIKAVRSYAQQLFLALKLLKKCGVLHA-------DIKPDNILV 569 (752)
T ss_pred EehhhhchHHHHHHHhC---cccceeehHHHHHHHHHHHHHHHHHhcCeeec-------ccCccceEe
Confidence 99999899999999876 3334443333 3444478889888888654 556666665
No 430
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=98.94 E-value=4e-09 Score=106.32 Aligned_cols=126 Identities=17% Similarity=0.146 Sum_probs=103.4
Q ss_pred cccCceEEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec-cchHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 469 RRIGKLVVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK-THHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 469 ~~i~~~~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~-~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.+++-+|.++++||+|+||..+.+ .+.+++.||||.=.. +...++..|.+..+.+...+.|...|-+....-+-.||+
T Consensus 24 ~~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVi 103 (449)
T KOG1165|consen 24 LMVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVI 103 (449)
T ss_pred eEecccceeccccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhh
Confidence 366777999999999999999997 489999999996654 455588889888877778899999998888888889999
Q ss_pred cCCCccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 547 ERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
|++..||.|+..-+.+++ +......++..++.-++++|.+..|.||||
T Consensus 104 dLLGPSLEDLFD~CgR~F--SvKTV~miA~Qmi~rie~vH~k~LIYRDIK 151 (449)
T KOG1165|consen 104 DLLGPSLEDLFDLCGRRF--SVKTVAMIAKQMITRIEYVHEKDLIYRDIK 151 (449)
T ss_pred hhhCcCHHHHHHHhcCcc--cHHhHHHHHHHHHHHHHHHHhcceeecccC
Confidence 999988888888876533 333445666666788999999999998887
No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.92 E-value=4.1e-09 Score=102.69 Aligned_cols=108 Identities=17% Similarity=0.072 Sum_probs=76.4
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcEEEEEEeeccc-------------------------hHHHHHHHHHHHhcCCCC--
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-------------------------HDVALKEIQNLIASDQHP-- 527 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~-------------------------~~~~~~Ei~~L~~l~~Hp-- 527 (613)
|...+.||+|+||.||++...+|+.||||+++... ...+.+|..++.++ .|+
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL-YEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH-HHcCC
Confidence 67788999999999999876789999999876421 01356788888777 666
Q ss_pred cceeEEEEEEeCCEEEEEecCCCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 528 NIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 528 nIV~l~g~~~~~~~~~LV~E~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
.+++.++ ....++||||++| +|.++... .....+...+..++.++|..+++|||+|
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~ 152 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHGIIHGDLS 152 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence 4455443 2456899999996 87655421 1123344445588899999888777766
No 432
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=98.90 E-value=1.1e-08 Score=107.69 Aligned_cols=119 Identities=21% Similarity=0.133 Sum_probs=91.1
Q ss_pred eEEEeeeEeecCceEEEEEEe-eC-CcEEEEEEeeccc---hHHHHHHHHHHHhcC---CCCcceeEEEEE-EeCCEEEE
Q 007199 474 LVVFNKEIAKGSNGTVVLEGN-YE-GRSVAVKRLVKTH---HDVALKEIQNLIASD---QHPNIVRWYGVE-SDQDFVYL 544 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~-~~-g~~VAVK~l~~~~---~~~~~~Ei~~L~~l~---~HpnIV~l~g~~-~~~~~~~L 544 (613)
.|.+.+.||+|+||.||++.. .+ ...+|+|...... ...+..|+.++..+. .-+++.+++... ....+.||
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 599999999999999999753 33 3578999777531 226888888888773 236899999999 57789999
Q ss_pred EecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 545 V~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
||+.+..+|.++..... ...++..-..++.+ .+|++||+.+++|||||
T Consensus 99 VM~l~G~sL~dl~~~~~----~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiK 149 (322)
T KOG1164|consen 99 VMSLLGPSLEDLRKRNP----PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIK 149 (322)
T ss_pred EEeccCccHHHHHHhCC----CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcC
Confidence 99999889999886542 33455544555444 89999999999888887
No 433
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.79 E-value=7.5e-09 Score=119.76 Aligned_cols=118 Identities=20% Similarity=0.108 Sum_probs=84.3
Q ss_pred ceEEEeeeEeecCceEEEEEEeeCCcEEEEEEeeccchHHHHHHHHHHHhc--CCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHDVALKEIQNLIAS--DQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~~~~~~~Ei~~L~~l--~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
+.|.+.++||+|+||+||+|.-.+|+.||+|.=+....-+|.-=.+++.++ .--+-|..+..++...+.-+||+||.+
T Consensus 698 ~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~ 777 (974)
T KOG1166|consen 698 EKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSP 777 (974)
T ss_pred eeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeeccc
Confidence 568999999999999999986666999999988764443333222233333 012456666677777888899999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|+|.+++... ..+.+...+.+.+ ..+.+||..+|||.|||
T Consensus 778 ~Gtlld~~N~~------~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiK 821 (974)
T KOG1166|consen 778 YGTLLDLINTN------KVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIK 821 (974)
T ss_pred cccHHHhhccC------CCCCchhhhHHHHHHHHHHHHHHhcceecccCC
Confidence 9999999843 3344444444333 78899999999876665
No 434
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=98.78 E-value=9.2e-09 Score=105.61 Aligned_cols=123 Identities=19% Similarity=0.154 Sum_probs=86.6
Q ss_pred ceEEEeeeEeecCceEEEEEEe------eCCcEEEEEEeeccc----hHHHHHHHHHHHhcCCCCcceeEEEEEEeC-CE
Q 007199 473 KLVVFNKEIAKGSNGTVVLEGN------YEGRSVAVKRLVKTH----HDVALKEIQNLIASDQHPNIVRWYGVESDQ-DF 541 (613)
Q Consensus 473 ~~~~~~~~LG~G~fG~Vyk~~~------~~g~~VAVK~l~~~~----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~-~~ 541 (613)
.+++...++-+|.||.||.+.. .+.+.|-||.++... ...+..|--.|... .|||+..+.+.+... +.
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~-sH~nll~V~~V~ie~~~~ 362 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGA-SHPNLLSVLGVSIEDYAT 362 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcC-cCCCccceeEEEeeccCc
Confidence 3477788899999999999731 122346667666532 22566777556555 899999999988764 47
Q ss_pred EEEEecCCC-ccHHHHHHHhcCCCcc--ccCCHHHH---HHHHHHHHHHHhcCCceeeccc
Q 007199 542 VYLSLERCT-CSLNDLIYVLSGSFEE--QLNAKEQD---SNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 542 ~~LV~E~~~-GsL~~~L~~~~~~~~~--~~~~~~~~---~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
.++++.++. |+|..||..+++-... ..+...+. ..++..||.|||+.++||.||-
T Consensus 363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiA 423 (563)
T KOG1024|consen 363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIA 423 (563)
T ss_pred ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhh
Confidence 888999999 9999999977632111 22222222 2233389999999999999985
No 435
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=98.77 E-value=1.1e-07 Score=96.98 Aligned_cols=123 Identities=29% Similarity=0.353 Sum_probs=94.9
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc------chHHHHHHHHHHHhcCCCC-cceeEEEEEEeCCEEEEEec
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT------HHDVALKEIQNLIASDQHP-NIVRWYGVESDQDFVYLSLE 547 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~------~~~~~~~Ei~~L~~l~~Hp-nIV~l~g~~~~~~~~~LV~E 547 (613)
|...+.||.|+||.||++... ..+|+|.+... ....+.+|++.+..+ .|+ +|++++..+......++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASL-NHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHc-cCCcceeeEEEEEecCCEEEEEEe
Confidence 567889999999999997544 78899988862 244788999888777 666 89999999988888899999
Q ss_pred CCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccceecCCCcCcceeee
Q 007199 548 RCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIELWKANGHPSAQLLK 610 (613)
Q Consensus 548 ~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlKllh~dg~PsniLlk 610 (613)
++. ++|.+++...... ..+.......+.. .++.++|+.+++|||+| |+|+|+.
T Consensus 79 ~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~k-------p~nil~~ 135 (384)
T COG0515 79 YVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSKGIIHRDIK-------PENILLD 135 (384)
T ss_pred cCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC-------HHHeeec
Confidence 999 5888777653210 2344444444444 67789999999998888 8888875
No 436
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.69 E-value=1.9e-07 Score=100.62 Aligned_cols=179 Identities=16% Similarity=0.154 Sum_probs=114.6
Q ss_pred CCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccc-----------cccCCC---CCeEEEecCCCCeEEEEecCC
Q 007199 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQ-----------ASFNSN---ASEFYLDVDEDWELYFHSKRF 112 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~-----------~~~~~~---~~~~~i~~~~DG~lY~~~~~~ 112 (613)
.+|++|+.|--.+++|||+.||+++|+|+.........+ +..... ...+|++.. |.+|.++|+++
T Consensus 213 vgdtlYvcTphn~v~ALDa~TGkekWkydp~~~~nv~~~~~tCrgVsy~~a~a~~k~pc~~rIflpt~-DarlIALdA~t 291 (773)
T COG4993 213 VGDTLYVCTPHNRVFALDAATGKEKWKYDPNLKSNVDPQHQTCRGVSYGAAKADAKSPCPRRIFLPTA-DARLIALDADT 291 (773)
T ss_pred ECCEEEEecCcceeEEeeccCCceeeecCCCCCCCcccccccccceecccccccccCCCceeEEeecC-CceEEEEeCCC
Confidence 789999999999999999999999999985432111111 111110 123566555 99999999999
Q ss_pred CceeeecccHHHH---------------hhh-CceeecCCcEEEEeecc---------eEEEEECCCCcEEEEEecCCCC
Q 007199 113 GKMKKLSSSAEEY---------------IRR-MPYISKDGGVTLGAMKT---------SVFLVDVKSGRVVDNYVLDFSA 167 (613)
Q Consensus 113 G~l~~~~~~~~~~---------------v~~-sP~~~~dg~v~~Gs~~~---------~~~~vD~~tG~~~~~~~~~~~~ 167 (613)
|++ -|.|..... +.. .|.+...++|+.|+-.+ .+-+.|..||+++|.++.+.+-
T Consensus 292 Gkv-c~~Fa~~Ga~~l~tgm~~~k~g~y~~tS~p~~~~~~~v~~g~v~Dn~st~e~sgVir~fdv~tG~l~w~~D~gnpD 370 (773)
T COG4993 292 GKV-CWSFANKGALNLETGMKDTKDGLYYGTSPPEFGVKGIVIAGSVADNESTWEPSGVIRGFDVLTGKLTWAGDPGNPD 370 (773)
T ss_pred CcE-eheeccCceeeeeccCCCCCCCeEeecCCCcccceeEEEeeccCCCceeeccCccccccccccCceEEccCCCCCC
Confidence 999 888865443 333 34456455555565433 3678899999999999998876
Q ss_pred CCCCCcCCCCCccccCCCcccccccccccccccccEEEEEeee------------------eEEEEEeCCCCceEEEEEe
Q 007199 168 STPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMRTD------------------YVLQSTSQDSGEVLWNVAY 229 (613)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~igr~d------------------~~l~a~d~~~G~~~Wn~t~ 229 (613)
.+.|....+. + +-+..+ .-++..-++ -.++||++--. -.+-|+|.+||+++|.+-.
T Consensus 371 ~t~p~~~g~t-y--t~nspn-~W~~~SyD~--~lnlVy~p~Gn~~pd~wg~trtp~dekysssivAlD~~TG~~kW~yQt 444 (773)
T COG4993 371 PTAPTAPGQT-Y--TRNSPN-SWASASYDA--KLNLVYVPMGNQTPDTWGGTRTPGDEKYSSSIVALDATTGKLKWVYQT 444 (773)
T ss_pred CCCCCCCCce-e--ecCCCC-cccccccCC--CCCeEEEeCCCCChhhccCCCCcccccccceeEEecCCCcceeeeeec
Confidence 5555443322 1 101100 011111222 14577775432 3578999999999999876
Q ss_pred ceee
Q 007199 230 ADFK 233 (613)
Q Consensus 230 ~~~~ 233 (613)
...+
T Consensus 445 vhhD 448 (773)
T COG4993 445 VHHD 448 (773)
T ss_pred cCcc
Confidence 6544
No 437
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.69 E-value=1.5e-07 Score=94.71 Aligned_cols=115 Identities=15% Similarity=0.161 Sum_probs=80.5
Q ss_pred eeeEe-ecCceEEEEEEeeCCcEEEEEEeecc----------------chHHHHHHHHHHHhcCCCCcc--eeEEEEEEe
Q 007199 478 NKEIA-KGSNGTVVLEGNYEGRSVAVKRLVKT----------------HHDVALKEIQNLIASDQHPNI--VRWYGVESD 538 (613)
Q Consensus 478 ~~~LG-~G~fG~Vyk~~~~~g~~VAVK~l~~~----------------~~~~~~~Ei~~L~~l~~HpnI--V~l~g~~~~ 538 (613)
...|| .|+.|+||+... .+..++||++... ....+.+|++++.++ +|++| ++.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~-~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L-~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT-PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQL-YEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEe-CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHH-HhCCCCCceeEeeeee
Confidence 45687 888888988543 4778999987531 123578899999888 88774 777777544
Q ss_pred CC-E---EEEEecCCCc--cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 539 QD-F---VYLSLERCTC--SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 539 ~~-~---~~LV~E~~~G--sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
.. . .+||||+++| +|.+++... .++... ...+..++.+||..+|+|||+| |++.++
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~-------~l~~~~-~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~ 179 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQEA-------PLSEEQ-WQAIGQLIARFHDAGVYHADLNAHNILLDPDG 179 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhcC-------CCCHHH-HHHHHHHHHHHHHCCCCCCCCCchhEEEcCCC
Confidence 32 2 3599999995 899888642 233333 3344589999999999888877 555444
No 438
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=98.59 E-value=2e-07 Score=101.97 Aligned_cols=114 Identities=18% Similarity=0.015 Sum_probs=71.0
Q ss_pred eeeEeecCceEEEEEEeeCCcEEEEEEeeccchH-------------------------------------------HHH
Q 007199 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHHD-------------------------------------------VAL 514 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~~~-------------------------------------------~~~ 514 (613)
.+.||+|++|+||+|...+|+.||||+.++.-.+ ++.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 3579999999999998889999999998753111 133
Q ss_pred HHHHHHHhc---CCCCcceeEEEEE-EeCCEEEEEecCCCc-cHHHHHHHhcCCCccccCCHHHHHHH-HHHHHHHHhcC
Q 007199 515 KEIQNLIAS---DQHPNIVRWYGVE-SDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNL-LNEVRIRLLPV 588 (613)
Q Consensus 515 ~Ei~~L~~l---~~HpnIV~l~g~~-~~~~~~~LV~E~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~-~~~~l~~Lh~~ 588 (613)
+|.+.+.++ .+|.+-+.+-..+ ......+|||||++| +|.++..... . ......+... +..++.++|..
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~----~-~~~~~~ia~~~~~~~l~ql~~~ 276 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE----A-GLDRKALAENLARSFLNQVLRD 276 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh----c-CCCHHHHHHHHHHHHHHHHHhC
Confidence 455444443 2233323332232 223457899999996 8888765421 1 1122233333 33578899988
Q ss_pred Cceeeccc
Q 007199 589 MENTKDIE 596 (613)
Q Consensus 589 ~iiHrDlK 596 (613)
+++|+|++
T Consensus 277 g~~H~D~h 284 (437)
T TIGR01982 277 GFFHADLH 284 (437)
T ss_pred CceeCCCC
Confidence 88766655
No 439
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.58 E-value=2.4e-07 Score=89.02 Aligned_cols=109 Identities=18% Similarity=0.105 Sum_probs=66.5
Q ss_pred eeeEeecCceEEEEEEeeCCcEEEEEEeeccch-----HH----------------------HHHHHHHHHhcCCCC--c
Q 007199 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH-----DV----------------------ALKEIQNLIASDQHP--N 528 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~~-----~~----------------------~~~Ei~~L~~l~~Hp--n 528 (613)
.+.||+|+||+||++...+++.||||+++.... .. ...|.+.+.++ .+. .
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l-~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRL-YEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHH-HHcCCC
Confidence 457999999999998766899999998875211 11 13455555554 222 3
Q ss_pred ceeEEEEEEeCCEEEEEecCCCc-cHH-HHHHHhcCCCccccCCHHHHHHHHHHHHHHHhc-CCceeeccc
Q 007199 529 IVRWYGVESDQDFVYLSLERCTC-SLN-DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP-VMENTKDIE 596 (613)
Q Consensus 529 IV~l~g~~~~~~~~~LV~E~~~G-sL~-~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~-~~iiHrDlK 596 (613)
+.+++++ ...++||||++| .+. ..+.... .. .....+.+.+..++.++|. .+++|||+|
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~--~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~ 142 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL--EDPEELYDQILELMRKLYREAGLVHGDLS 142 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhhh---hc--ccHHHHHHHHHHHHHHHhhccCcCcCCCC
Confidence 4455543 245899999995 322 2232211 00 2223344444589999998 887666554
No 440
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.55 E-value=3e-07 Score=83.78 Aligned_cols=116 Identities=18% Similarity=0.178 Sum_probs=80.6
Q ss_pred eeeEeecCceEEEEEEeeCCcEEEEEEeeccc-hHHHHHHHHHHHhcCCC--CcceeEEEEEEeCCEEEEEecCCCc-cH
Q 007199 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-HDVALKEIQNLIASDQH--PNIVRWYGVESDQDFVYLSLERCTC-SL 553 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~-~~~~~~Ei~~L~~l~~H--pnIV~l~g~~~~~~~~~LV~E~~~G-sL 553 (613)
.+.||+|.++.||++... +..+++|...... ...+.+|+..+..+ +| .++++++.++...+..+++|||++| .+
T Consensus 3 ~~~i~~g~~~~v~~~~~~-~~~~~iK~~~~~~~~~~~~~e~~~~~~l-~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~ 80 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTK-DEDYVLKINPSREKGADREREVAILQLL-ARKGLPVPKVLASGESDGWSYLLMEWIEGETL 80 (155)
T ss_pred ceecccccccceEEEEec-CCeEEEEecCCCCchhHHHHHHHHHHHH-HHcCCCCCeEEEEcCCCCccEEEEEecCCeec
Confidence 467999999999996543 4789999987643 35788999988888 55 5899999988888899999999996 55
Q ss_pred HHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccceecCCCcCcceee
Q 007199 554 NDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLL 609 (613)
Q Consensus 554 ~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlKllh~dg~PsniLl 609 (613)
..+ . ..........+..++.++|.... .-++|+|.+|.|+|+
T Consensus 81 ~~~-~---------~~~~~~~~~~~~~~l~~lh~~~~----~~i~H~Dl~~~Nil~ 122 (155)
T cd05120 81 DEV-S---------EEEKEDIAEQLAELLAKLHQLPL----LVLCHGDLHPGNILV 122 (155)
T ss_pred ccC-C---------HHHHHHHHHHHHHHHHHHhCCCc----eEEEecCCCcceEEE
Confidence 432 0 00112233444477888887531 113445555666665
No 441
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=98.53 E-value=1.1e-07 Score=66.58 Aligned_cols=35 Identities=40% Similarity=0.664 Sum_probs=32.5
Q ss_pred CEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeec
Q 007199 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSS 83 (613)
Q Consensus 49 ~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~ 83 (613)
|.||+++.||.|||+|+.||+++|+|++++++.++
T Consensus 1 ~~v~~~~~~g~l~AlD~~TG~~~W~~~~~~~~~~~ 35 (38)
T PF01011_consen 1 GRVYVGTPDGYLYALDAKTGKVLWKFQTGPPVDSS 35 (38)
T ss_dssp TEEEEETTTSEEEEEETTTTSEEEEEESSSGGGSC
T ss_pred CEEEEeCCCCEEEEEECCCCCEEEeeeCCCCCccC
Confidence 57999999999999999999999999999888765
No 442
>COG4993 Gcd Glucose dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.34 E-value=1.4e-06 Score=94.11 Aligned_cols=159 Identities=13% Similarity=0.122 Sum_probs=98.1
Q ss_pred CCCCeeeEEeeCCCceeec------cccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHHHhhhCcee-ecCC-
Q 007199 65 TKLGKIRWSFGTGRPIYSS------YQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPYI-SKDG- 136 (613)
Q Consensus 65 ~~tG~~~W~~~~~~~i~s~------~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~v~~sP~~-~~dg- 136 (613)
-..=++.|+|+||..-... ++.......+.+|+..+ .-.+|++|+.||+. ||+|....--.-.|+. .++|
T Consensus 181 V~nL~~AWty~TGD~k~~~d~~e~t~e~tPLkvgdtlYvcTp-hn~v~ALDa~TGke-kWkydp~~~~nv~~~~~tCrgV 258 (773)
T COG4993 181 VGNLQVAWTYRTGDVKQPEDPGETTNEVTPLKVGDTLYVCTP-HNRVFALDAATGKE-KWKYDPNLKSNVDPQHQTCRGV 258 (773)
T ss_pred hhccceeEEEecCcccCCCCcccccccccceEECCEEEEecC-cceeEEeeccCCce-eeecCCCCCCCcccccccccce
Confidence 3445789999998632111 11111111235565555 99999999999999 9999876543333431 1222
Q ss_pred ---------------cEEEEeecceEEEEECCCCcEEEEEecCCCCCCC-CCcCCCCCccccCCCccccccccccccccc
Q 007199 137 ---------------GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTP-GFQSDENKHVVPVDGYEELVESGVGNLKRI 200 (613)
Q Consensus 137 ---------------~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (613)
+||++.-|.++.|||++||++.|.|...+..... .+.... .+.-+..++.. ..
T Consensus 259 sy~~a~a~~k~pc~~rIflpt~DarlIALdA~tGkvc~~Fa~~Ga~~l~tgm~~~k-------~g~y~~tS~p~----~~ 327 (773)
T COG4993 259 SYGAAKADAKSPCPRRIFLPTADARLIALDADTGKVCWSFANKGALNLETGMKDTK-------DGLYYGTSPPE----FG 327 (773)
T ss_pred ecccccccccCCCceeEEeecCCceEEEEeCCCCcEeheeccCceeeeeccCCCCC-------CCeEeecCCCc----cc
Confidence 3999999999999999999999999876643211 111110 11111112111 12
Q ss_pred ccEEEEEe----------eeeEEEEEeCCCCceEEEEEeceeeeee
Q 007199 201 RQLVYIMR----------TDYVLQSTSQDSGEVLWNVAYADFKAEF 236 (613)
Q Consensus 201 ~~~v~igr----------~d~~l~a~d~~~G~~~Wn~t~~~~~a~~ 236 (613)
...++||+ .-+.++++|..+|+..|++.-+-=+.+.
T Consensus 328 ~~~~v~~g~v~Dn~st~e~sgVir~fdv~tG~l~w~~D~gnpD~t~ 373 (773)
T COG4993 328 VKGIVIAGSVADNESTWEPSGVIRGFDVLTGKLTWAGDPGNPDPTA 373 (773)
T ss_pred ceeEEEeeccCCCceeeccCccccccccccCceEEccCCCCCCCCC
Confidence 33555543 3466799999999999999877554443
No 443
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=98.30 E-value=3.9e-06 Score=93.37 Aligned_cols=117 Identities=16% Similarity=0.062 Sum_probs=71.1
Q ss_pred EEEeeeEeecCceEEEEEEeeC-CcEEEEEEeeccch-------------------------------------H-----
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYE-GRSVAVKRLVKTHH-------------------------------------D----- 511 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~-g~~VAVK~l~~~~~-------------------------------------~----- 511 (613)
|.. +.||+|++|+||+|...+ |+.||||++++.-. +
T Consensus 122 fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~E 200 (537)
T PRK04750 122 FDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDE 200 (537)
T ss_pred cCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHh
Confidence 444 689999999999997666 99999999975210 0
Q ss_pred -HHHHHHHHHHhc---CCCCcceeEEEEEEe-CCEEEEEecCCCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHH
Q 007199 512 -VALKEIQNLIAS---DQHPNIVRWYGVESD-QDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585 (613)
Q Consensus 512 -~~~~Ei~~L~~l---~~HpnIV~l~g~~~~-~~~~~LV~E~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~L 585 (613)
++.+|+..+.++ ..+.+.+.+-..+.+ ....+||||||.| .|.++-.-. ....-........+..++.++
T Consensus 201 lD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~----~~g~d~~~la~~~v~~~~~Qi 276 (537)
T PRK04750 201 LDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALR----AAGTDMKLLAERGVEVFFTQV 276 (537)
T ss_pred hCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHH----hcCCCHHHHHHHHHHHHHHHH
Confidence 234455444443 234444444444433 4467899999996 887643211 111111223333333677888
Q ss_pred hcCCceeeccc
Q 007199 586 LPVMENTKDIE 596 (613)
Q Consensus 586 h~~~iiHrDlK 596 (613)
+..+++|+|+|
T Consensus 277 f~~GffHaDpH 287 (537)
T PRK04750 277 FRDGFFHADMH 287 (537)
T ss_pred HhCCeeeCCCC
Confidence 88787776665
No 444
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=98.19 E-value=1.9e-06 Score=60.39 Aligned_cols=33 Identities=21% Similarity=0.384 Sum_probs=29.8
Q ss_pred CcEEEEeecceEEEEECCCCcEEEEEecCCCCC
Q 007199 136 GGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSAS 168 (613)
Q Consensus 136 g~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~ 168 (613)
|.||+|+.++.+||+|++||+++|+|..+....
T Consensus 1 ~~v~~~~~~g~l~AlD~~TG~~~W~~~~~~~~~ 33 (38)
T PF01011_consen 1 GRVYVGTPDGYLYALDAKTGKVLWKFQTGPPVD 33 (38)
T ss_dssp TEEEEETTTSEEEEEETTTTSEEEEEESSSGGG
T ss_pred CEEEEeCCCCEEEEEECCCCCEEEeeeCCCCCc
Confidence 579999999999999999999999999876544
No 445
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=98.08 E-value=2.6e-06 Score=60.34 Aligned_cols=40 Identities=23% Similarity=0.352 Sum_probs=29.3
Q ss_pred CceeeecccHHHHhhhCceeecCCcEEEEeecceEEEEECCC
Q 007199 113 GKMKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKS 154 (613)
Q Consensus 113 G~l~~~~~~~~~~v~~sP~~~~dg~v~~Gs~~~~~~~vD~~t 154 (613)
|++ +|.+.++..+.++|++. ||.||+|+.++++||||++|
T Consensus 1 G~~-~W~~~~~~~~~~~~~v~-~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 1 GKV-LWSYDTGGPIWSSPAVA-GGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp S-E-EEEEE-SS---S--EEC-TSEEEEE-TTSEEEEEETT-
T ss_pred Cce-eEEEECCCCcCcCCEEE-CCEEEEEcCCCEEEEEeCCC
Confidence 567 99999999999999998 89999999999999999986
No 446
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=98.02 E-value=2.8e-05 Score=73.08 Aligned_cols=115 Identities=11% Similarity=-0.004 Sum_probs=75.3
Q ss_pred eeEeecCceEEEEEEeeCCcEEEEEEeeccc--hHHHHHHHHHHHhcCCCCc-ceeEEEEEEeCCEEEEEecCCCc-cHH
Q 007199 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH--HDVALKEIQNLIASDQHPN-IVRWYGVESDQDFVYLSLERCTC-SLN 554 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~--~~~~~~Ei~~L~~l~~Hpn-IV~l~g~~~~~~~~~LV~E~~~G-sL~ 554 (613)
+.|+.|.++.||+.. ..+..+++|...... ...+.+|++++..+ .+.+ +.+++.+. .+..++||||++| ++.
T Consensus 4 ~~l~~G~~~~vy~~~-~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l-~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l~ 79 (170)
T cd05151 4 SPLKGGMTNKNYRVE-VANKKYVVRIPGNGTELLINRENEAENSKLA-AEAGIGPKLYYFD--PETGVLITEFIEGSELL 79 (170)
T ss_pred eecCCcccCceEEEE-ECCeEEEEEeCCCCcccccCHHHHHHHHHHH-HHhCCCCceEEEe--CCCCeEEEEecCCCccc
Confidence 568899999999854 347889999876543 23567888888776 4433 44555543 3345799999997 664
Q ss_pred HHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccceecCCCcCcceeee
Q 007199 555 DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSAQLLK 610 (613)
Q Consensus 555 ~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlKllh~dg~PsniLlk 610 (613)
+. . ... ......+..++..||...+- ...++|.|.+|+|+|+.
T Consensus 80 ~~-~---------~~~-~~~~~~l~~~l~~LH~~~~~--~~~~~HgD~~~~Nil~~ 122 (170)
T cd05151 80 TE-D---------FSD-PENLEKIAKLLKKLHSSPLP--DLVPCHNDLLPGNFLLD 122 (170)
T ss_pred cc-c---------ccC-HHHHHHHHHHHHHHhCCCCC--CceeecCCCCcCcEEEE
Confidence 32 0 011 12234445788999997752 22367777788888763
No 447
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=97.93 E-value=1.4e-05 Score=53.89 Aligned_cols=32 Identities=28% Similarity=0.637 Sum_probs=28.5
Q ss_pred ceeecCCcEEEEeecceEEEEECCCCcEEEEE
Q 007199 130 PYISKDGGVTLGAMKTSVFLVDVKSGRVVDNY 161 (613)
Q Consensus 130 P~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~ 161 (613)
|.+..||.+|+|+.++.+||+|++||+++|++
T Consensus 1 ~~~~~~~~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 1 PVVLSDGTVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred CcEEECCEEEEEcCCCEEEEEEcccCcEEEEc
Confidence 34555889999999999999999999999986
No 448
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=97.91 E-value=1.4e-05 Score=53.81 Aligned_cols=29 Identities=31% Similarity=0.631 Sum_probs=26.5
Q ss_pred CCCEEEEEecCCcEEEEeCCCCeeeEEee
Q 007199 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG 75 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG~~~W~~~ 75 (613)
.++.+|+++.||.|||+|..+|+++|+++
T Consensus 5 ~~~~v~~~~~~g~l~a~d~~~G~~~W~~~ 33 (33)
T smart00564 5 SDGTVYVGSTDGTLYALDAKTGEILWTYK 33 (33)
T ss_pred ECCEEEEEcCCCEEEEEEcccCcEEEEcC
Confidence 45699999999999999999999999873
No 449
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=97.85 E-value=4.8e-06 Score=94.26 Aligned_cols=123 Identities=20% Similarity=0.177 Sum_probs=85.1
Q ss_pred EEeeeEeecCceEEEEE-EeeCCcEEEEEEee----ccc-hH----HHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 476 VFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLV----KTH-HD----VALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 476 ~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~----~~~-~~----~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
....++|.|++|.|+.. ........+.|..+ ... .. .+..|. .+...+.|||++..+..+......+-.
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~-~i~~~l~h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEF-CIGSSLSHPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhhe-eecccccCCchhhhHHHHhhcccchhh
Confidence 46778999999977764 33334444444332 211 11 233444 223335999998887777766666666
Q ss_pred ecCCCccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc----eecCCC
Q 007199 546 LERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 546 ~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
||||+++|+.++.... .....+.++..++++.|+.|+|..++.|||+| ++..+|
T Consensus 400 mE~~~~Dlf~~~~~~~---~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g 457 (601)
T KOG0590|consen 400 MEYCPYDLFSLVMSNG---KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENG 457 (601)
T ss_pred hhcccHHHHHHHhccc---ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCC
Confidence 9999999999998642 34556677888888899999999999999998 555555
No 450
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=97.76 E-value=0.00029 Score=70.68 Aligned_cols=145 Identities=17% Similarity=0.190 Sum_probs=99.6
Q ss_pred CCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHHHhh
Q 007199 48 PDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIR 127 (613)
Q Consensus 48 ~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~v~ 127 (613)
.+.++|++.||.|...|..+-+++=+|..+.||... +..+ + ...|. ++.||.+-.+|.++|....+. +=.+.+.
T Consensus 25 ~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c--~F~d-~-~~~~~-G~~dg~vr~~Dln~~~~~~ig-th~~~i~ 98 (323)
T KOG1036|consen 25 SSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDC--AFAD-E-STIVT-GGLDGQVRRYDLNTGNEDQIG-THDEGIR 98 (323)
T ss_pred CCcEEEEeccCcEEEEeccchhhhhheecCCceeee--eccC-C-ceEEE-eccCceEEEEEecCCcceeec-cCCCceE
Confidence 477889999999999998888999999999999987 3222 2 23444 555999999999988772222 2223333
Q ss_pred hCceeecCCcEEEEeecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccccccccEEEEE
Q 007199 128 RMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLVYIM 207 (613)
Q Consensus 128 ~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ig 207 (613)
.--....+|.|+.||||.++-.+|+.+-...-.+..+..+ .+.+. .+++|++|
T Consensus 99 ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkV--------------------y~~~v-------~g~~LvVg 151 (323)
T KOG1036|consen 99 CIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKV--------------------YCMDV-------SGNRLVVG 151 (323)
T ss_pred EEEeeccCCeEEEcccCccEEEEeccccccccccccCceE--------------------EEEec-------cCCEEEEe
Confidence 3222234778999999999999999863233222222211 12221 25699999
Q ss_pred eeeeEEEEEeCCCCceEE
Q 007199 208 RTDYVLQSTSQDSGEVLW 225 (613)
Q Consensus 208 r~d~~l~a~d~~~G~~~W 225 (613)
..|..|..+|.++=....
T Consensus 152 ~~~r~v~iyDLRn~~~~~ 169 (323)
T KOG1036|consen 152 TSDRKVLIYDLRNLDEPF 169 (323)
T ss_pred ecCceEEEEEcccccchh
Confidence 999999999987655444
No 451
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.73 E-value=1.4e-05 Score=94.36 Aligned_cols=73 Identities=15% Similarity=0.089 Sum_probs=51.9
Q ss_pred CC-CcceeEEEEE-------EeCCEEEEEecCCCccHHHHHHHhcCCCccccCCHHHHH---HHHHHHHHHHhcCCceee
Q 007199 525 QH-PNIVRWYGVE-------SDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDS---NLLNEVRIRLLPVMENTK 593 (613)
Q Consensus 525 ~H-pnIV~l~g~~-------~~~~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~---~~~~~~l~~Lh~~~iiHr 593 (613)
+| +||.+++++| ...+.++++|||++++|.++|+.. ...++...+. +.++.||.|||+++|+||
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~gIvHr 104 (793)
T PLN00181 30 SHIDYVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNP-----DRSVDAFECFHVFRQIVEIVNAAHSQGIVVH 104 (793)
T ss_pred hHHHHHHHhhcccCCccccccccchhhhhhccCCccHHHHHhcc-----cccccHHHHHHHHHHHHHHHHHHHhCCeeec
Confidence 55 5788888877 344578889999989999999742 2234444444 444499999999999887
Q ss_pred ccceecCCCcCcceee
Q 007199 594 DIELWKANGHPSAQLL 609 (613)
Q Consensus 594 DlKllh~dg~PsniLl 609 (613)
|| ||+||||
T Consensus 105 Dl-------KP~NiLl 113 (793)
T PLN00181 105 NV-------RPSCFVM 113 (793)
T ss_pred cC-------CchhEEE
Confidence 66 5555555
No 452
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=97.69 E-value=0.00091 Score=68.55 Aligned_cols=148 Identities=13% Similarity=0.185 Sum_probs=102.4
Q ss_pred CCCEEEEEecCCcEEEEeCCCCeeeEEee-CCCce-eeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHH
Q 007199 47 EPDVALVAALDGTIHLVDTKLGKIRWSFG-TGRPI-YSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE 124 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG~~~W~~~-~~~~i-~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~ 124 (613)
.+.++-.|.++|.|.-.+..||..+|++. ...-| .-.+-. . ..+++.|+.||+++++....+.+.+.-.-
T Consensus 117 dgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp-~----a~illAG~~DGsvWmw~ip~~~~~kv~~G--- 188 (399)
T KOG0296|consen 117 DGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHP-R----AHILLAGSTDGSVWMWQIPSQALCKVMSG--- 188 (399)
T ss_pred CceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecc-c----ccEEEeecCCCcEEEEECCCcceeeEecC---
Confidence 55666678899999999999999999995 22222 111111 1 15788899999999999987555343322
Q ss_pred HhhhCcee----ecCC-cEEEEeecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccccc
Q 007199 125 YIRRMPYI----SKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKR 199 (613)
Q Consensus 125 ~v~~sP~~----~~dg-~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (613)
+.+||- .-|| ++.+|..|+++.+-|++||..+-+.+....-...+ ++.. .
T Consensus 189 --h~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~------------------~~~~-----~ 243 (399)
T KOG0296|consen 189 --HNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPC------------------ISLN-----L 243 (399)
T ss_pred --CCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCc------------------cccc-----c
Confidence 345553 2255 57789999999999999999998887544221111 1100 1
Q ss_pred cccEEEEEeeeeEEEEEeCCCCceEEEE
Q 007199 200 IRQLVYIMRTDYVLQSTSQDSGEVLWNV 227 (613)
Q Consensus 200 ~~~~v~igr~d~~l~a~d~~~G~~~Wn~ 227 (613)
...+++=|..|..++.++..+|+++--.
T Consensus 244 ~~~~~~~g~~e~~~~~~~~~sgKVv~~~ 271 (399)
T KOG0296|consen 244 AGSTLTKGNSEGVACGVNNGSGKVVNCN 271 (399)
T ss_pred ccceeEeccCCccEEEEccccceEEEec
Confidence 2348889999999999999999987543
No 453
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=97.69 E-value=0.00014 Score=70.57 Aligned_cols=107 Identities=13% Similarity=-0.012 Sum_probs=67.2
Q ss_pred eeEeecCceEEEEEEee-------CCcEEEEEEeecc-------------c------------hH----HHHHHHHHHHh
Q 007199 479 KEIAKGSNGTVVLEGNY-------EGRSVAVKRLVKT-------------H------------HD----VALKEIQNLIA 522 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~-------~g~~VAVK~l~~~-------------~------------~~----~~~~Ei~~L~~ 522 (613)
..||.|.-+.||.|... .+..+|||..+.. . .. ...+|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999997433 3578999976531 0 11 23489999988
Q ss_pred cCCC-CcceeEEEEEEeCCEEEEEecCCCc-cHH-HHHHHhcCCCccccCCH---HHHHHHHHHHHHHH-hcCCceeecc
Q 007199 523 SDQH-PNIVRWYGVESDQDFVYLSLERCTC-SLN-DLIYVLSGSFEEQLNAK---EQDSNLLNEVRIRL-LPVMENTKDI 595 (613)
Q Consensus 523 l~~H-pnIV~l~g~~~~~~~~~LV~E~~~G-sL~-~~L~~~~~~~~~~~~~~---~~~~~~~~~~l~~L-h~~~iiHrDl 595 (613)
+-.. -++.+++.+ ..-+|||||+.| .+. ..++.. .+.. ..+...++.+|..+ |..+++|+|+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~-------~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDL 151 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA-------KLNDEEMKNAYYQVLSMMKQLYKECNLVHADL 151 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc-------ccCHHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 7332 466676654 456789999985 332 223221 1111 22233444677777 8889988888
Q ss_pred c
Q 007199 596 E 596 (613)
Q Consensus 596 K 596 (613)
+
T Consensus 152 s 152 (197)
T cd05146 152 S 152 (197)
T ss_pred C
Confidence 7
No 454
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=97.64 E-value=7.6e-06 Score=80.80 Aligned_cols=108 Identities=16% Similarity=0.136 Sum_probs=84.4
Q ss_pred EEEeeeEeecCceEEEEEEeeCCcEEEEEEeecc-----chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCC
Q 007199 475 VVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKT-----HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERC 549 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~-----~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~ 549 (613)
+.+..+|.+...|..|+ +++.|..+++|++... -..+|..|.-.|+- ..||||+.+++.|.....+.++..||
T Consensus 192 lnl~tkl~e~hsgelwr-grwqgndivakil~vr~~t~risrdfneefp~lri-fshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWR-GRWQGNDIVAKILNVREVTARISRDFNEEFPALRI-FSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhccCCCccccc-ccccCcchhhhhhhhhhcchhhcchhhhhCcceee-ecCCchhhhhhhccCCCCceEeeeec
Confidence 45566788888899998 5566777777877642 22367888877744 49999999999999999999999999
Q ss_pred C-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcC
Q 007199 550 T-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPV 588 (613)
Q Consensus 550 ~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~ 588 (613)
+ |||+.+|+.. ........++.++.. .||.|||+.
T Consensus 270 p~gslynvlhe~----t~vvvd~sqav~faldiargmaflhsl 308 (448)
T KOG0195|consen 270 PFGSLYNVLHEQ----TSVVVDHSQAVRFALDIARGMAFLHSL 308 (448)
T ss_pred cchHHHHHHhcC----ccEEEecchHHHHHHHHHhhHHHHhhc
Confidence 9 9999999975 334455667777766 899999985
No 455
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=97.61 E-value=9.5e-06 Score=93.45 Aligned_cols=119 Identities=18% Similarity=0.088 Sum_probs=91.4
Q ss_pred eEEEeeeEeecCceEEEEEEeeCCcEEEEEEeeccc----hHHHHHHHHHH-HhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 474 LVVFNKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH----HDVALKEIQNL-IASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~----~~~~~~Ei~~L-~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.+...+.||++.|=+|.++...+|. |+||.+-+.. .+.+.++++-+ ..+.+|||.+.+.-+......-|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 3788899999999999997777776 8999887632 22333333222 2446999999988887777788999999
Q ss_pred CCccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 549 CTCSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
..-+|+|.|..+. ........|++.++..|+.++|+.+|+|+|||
T Consensus 103 vkhnLyDRlSTRP---FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIK 147 (1431)
T KOG1240|consen 103 VKHNLYDRLSTRP---FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIK 147 (1431)
T ss_pred Hhhhhhhhhccch---HHHHHHHHHHHHHHHHHHHHHHHcCccccccc
Confidence 9999999987542 33445678999999999999999999877665
No 456
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=97.60 E-value=0.0012 Score=65.39 Aligned_cols=151 Identities=15% Similarity=0.162 Sum_probs=99.4
Q ss_pred CCCEEEEEecCCcEEEEeCCCCeeeEEeeCCC-ceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHH-H
Q 007199 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGR-PIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAE-E 124 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~-~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~-~ 124 (613)
.++.+++++.||.|+..|..+++...++.... ++..- ....+ ..+++.++.||.++.+|..+++. ...+... .
T Consensus 62 ~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~---~~~~~-~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~ 136 (289)
T cd00200 62 DGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSV---AFSPD-GRILSSSSRDKTIKVWDVETGKC-LTTLRGHTD 136 (289)
T ss_pred CCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEE---EEcCC-CCEEEEecCCCeEEEEECCCcEE-EEEeccCCC
Confidence 34589999999999999999999999887543 44433 11111 24666677799999999987776 4444421 1
Q ss_pred HhhhCceeecCCcEEE-EeecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccccccccE
Q 007199 125 YIRRMPYISKDGGVTL-GAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQL 203 (613)
Q Consensus 125 ~v~~sP~~~~dg~v~~-Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (613)
.+ .+..+..++.+++ |+.++.++..|..+|+.+..+........ .+ ...+ ....
T Consensus 137 ~i-~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~----------~~-------~~~~-------~~~~ 191 (289)
T cd00200 137 WV-NSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVN----------SV-------AFSP-------DGEK 191 (289)
T ss_pred cE-EEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEecCccccc----------eE-------EECC-------CcCE
Confidence 22 1223343454554 55599999999999999988874321100 00 0111 1237
Q ss_pred EEEEeeeeEEEEEeCCCCceEEEE
Q 007199 204 VYIMRTDYVLQSTSQDSGEVLWNV 227 (613)
Q Consensus 204 v~igr~d~~l~a~d~~~G~~~Wn~ 227 (613)
++++..|+.|+.+|..+++..-.+
T Consensus 192 l~~~~~~~~i~i~d~~~~~~~~~~ 215 (289)
T cd00200 192 LLSSSSDGTIKLWDLSTGKCLGTL 215 (289)
T ss_pred EEEecCCCcEEEEECCCCceecch
Confidence 888888999999999887766554
No 457
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=97.60 E-value=8.5e-05 Score=52.54 Aligned_cols=40 Identities=35% Similarity=0.623 Sum_probs=23.4
Q ss_pred CeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCC
Q 007199 68 GKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRF 112 (613)
Q Consensus 68 G~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~ 112 (613)
|+++|++++++++.++.. .. .+.+|+.+. ||.|||+|++|
T Consensus 1 G~~~W~~~~~~~~~~~~~--v~--~g~vyv~~~-dg~l~ald~~t 40 (40)
T PF13570_consen 1 GKVLWSYDTGGPIWSSPA--VA--GGRVYVGTG-DGNLYALDAAT 40 (40)
T ss_dssp S-EEEEEE-SS---S--E--EC--TSEEEEE-T-TSEEEEEETT-
T ss_pred CceeEEEECCCCcCcCCE--EE--CCEEEEEcC-CCEEEEEeCCC
Confidence 899999999998887722 12 234565555 99999999874
No 458
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=97.59 E-value=7.4e-05 Score=77.69 Aligned_cols=69 Identities=22% Similarity=0.261 Sum_probs=52.3
Q ss_pred CCCCcceeEEEEEEe---------------------------CCEEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHH
Q 007199 524 DQHPNIVRWYGVESD---------------------------QDFVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSN 576 (613)
Q Consensus 524 ~~HpnIV~l~g~~~~---------------------------~~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~ 576 (613)
-+|||||++.++|.+ ...+|+||...+.+|.+++..+. .+.-.-..+..
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC----CchHHHHHHHH
Confidence 489999999998864 23589999999999999998642 22222223333
Q ss_pred HHHHHHHHHhcCCceeeccc
Q 007199 577 LLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 577 ~~~~~l~~Lh~~~iiHrDlK 596 (613)
++.+++.|||++++.|||+|
T Consensus 349 QlLEav~hL~~hgvAhRDlK 368 (598)
T KOG4158|consen 349 QLLEAVTHLHKHGVAHRDLK 368 (598)
T ss_pred HHHHHHHHHHHccchhhccc
Confidence 34499999999999999999
No 459
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=97.59 E-value=0.0021 Score=65.51 Aligned_cols=110 Identities=12% Similarity=0.176 Sum_probs=75.7
Q ss_pred CEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHHHhhh
Q 007199 49 DVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIRR 128 (613)
Q Consensus 49 ~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~v~~ 128 (613)
++++.+..||.|+.+|..||+.+.++.....+.+- ....+...+|+.+..|+.++.+|..+|+. ...+....-+ .
T Consensus 2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~~~~l---~~~~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~-~ 76 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQRPRGI---TLSKDGKLLYVCASDSDTIQVIDLATGEV-IGTLPSGPDP-E 76 (300)
T ss_pred cEEEEecCCCEEEEEECCCCceEEEEECCCCCCce---EECCCCCEEEEEECCCCeEEEEECCCCcE-EEeccCCCCc-c
Confidence 56677788999999999999999999754433221 12233335677777899999999998877 3223222212 1
Q ss_pred CceeecCCc-EEEE-eecceEEEEECCCCcEEEEEec
Q 007199 129 MPYISKDGG-VTLG-AMKTSVFLVDVKSGRVVDNYVL 163 (613)
Q Consensus 129 sP~~~~dg~-v~~G-s~~~~~~~vD~~tG~~~~~~~~ 163 (613)
..+++.||. +|+. +.++.++.+|..+++.+..+..
T Consensus 77 ~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~ 113 (300)
T TIGR03866 77 LFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV 113 (300)
T ss_pred EEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC
Confidence 233444654 6665 4578999999999998887754
No 460
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=97.59 E-value=0.00091 Score=66.17 Aligned_cols=148 Identities=16% Similarity=0.172 Sum_probs=96.5
Q ss_pred CEEEEEecCCcEEEEeCCCCeeeEEeeCC-CceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHH-Hh
Q 007199 49 DVALVAALDGTIHLVDTKLGKIRWSFGTG-RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE-YI 126 (613)
Q Consensus 49 ~~v~v~t~dG~l~ald~~tG~~~W~~~~~-~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~-~v 126 (613)
.++++++.||.|+..|..+++....+... .++..- ....+ ..+++.++.||.++.+|..+++. ...+.... .+
T Consensus 106 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~---~~~~~-~~~l~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~i 180 (289)
T cd00200 106 RILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSV---AFSPD-GTFVASSSQDGTIKLWDLRTGKC-VATLTGHTGEV 180 (289)
T ss_pred CEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEE---EEcCc-CCEEEEEcCCCcEEEEEcccccc-ceeEecCcccc
Confidence 55555555999999999999999998732 334332 11111 24556666699999999987776 44444332 22
Q ss_pred hhCceeecCC-cEEEEeecceEEEEECCCCcEEEEEecCC-CCCCCCCcCCCCCccccCCCcccccccccccccccccEE
Q 007199 127 RRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDF-SASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQLV 204 (613)
Q Consensus 127 ~~sP~~~~dg-~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 204 (613)
.+..+..|+ .+++|+.++.++..|..+|+.+..+.... .+. . . ... .++.+
T Consensus 181 -~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~-~---------~--------~~~--------~~~~~ 233 (289)
T cd00200 181 -NSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVN-S---------V--------AFS--------PDGYL 233 (289)
T ss_pred -ceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceE-E---------E--------EEc--------CCCcE
Confidence 233445565 68889989999999999999988874221 111 0 0 011 11344
Q ss_pred EEEee-eeEEEEEeCCCCceEEEEE
Q 007199 205 YIMRT-DYVLQSTSQDSGEVLWNVA 228 (613)
Q Consensus 205 ~igr~-d~~l~a~d~~~G~~~Wn~t 228 (613)
+++.. |+.|+.+|..+++....+.
T Consensus 234 ~~~~~~~~~i~i~~~~~~~~~~~~~ 258 (289)
T cd00200 234 LASGSEDGTIRVWDLRTGECVQTLS 258 (289)
T ss_pred EEEEcCCCcEEEEEcCCceeEEEcc
Confidence 55444 9999999998887776665
No 461
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.57 E-value=0.0009 Score=63.41 Aligned_cols=125 Identities=16% Similarity=0.138 Sum_probs=85.6
Q ss_pred EeeeEeecCceEEEEEEeeCCcEEEEEE-eecc----------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEE
Q 007199 477 FNKEIAKGSNGTVVLEGNYEGRSVAVKR-LVKT----------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLS 545 (613)
Q Consensus 477 ~~~~LG~G~fG~Vyk~~~~~g~~VAVK~-l~~~----------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV 545 (613)
....|-+|+-+.|++ ..+.|+...||. +.+. ......+|++.|.++ .--.|.-..=++.+...-.|.
T Consensus 11 ~l~likQGAEArv~~-~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~-~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPR-GSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKC-RALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEee-eccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHH-HHhCCCCceEEEEecCCCeEE
Confidence 456788999999997 567788888874 3331 123567899888887 444555555556666677789
Q ss_pred ecCCCc--cHHHHHHHhcCCCccccCCHH--HHHHHHHHHHHHHhcCCceeeccc----eecCCCcCcc
Q 007199 546 LERCTC--SLNDLIYVLSGSFEEQLNAKE--QDSNLLNEVRIRLLPVMENTKDIE----LWKANGHPSA 606 (613)
Q Consensus 546 ~E~~~G--sL~~~L~~~~~~~~~~~~~~~--~~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg~Psn 606 (613)
|||.+| ++.+++...- ......+. ...+.+-+.+.-||.+.+||.||- ++.+++.+-+
T Consensus 89 ME~~~g~~~vk~~i~~~~---~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~ 154 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTM---EDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQIT 154 (229)
T ss_pred EEeccchhHHHHHHHHHc---cCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCc
Confidence 999998 9999998753 22222222 222222278899999999999987 6666666655
No 462
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=97.51 E-value=0.00021 Score=70.09 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=57.5
Q ss_pred eeEeecCceEEEEEEeeCCcEEEEEEeecc----chHHHHHHHHHHHhcCCC--CcceeEEEEEEeCC---EEEEEecCC
Q 007199 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKT----HHDVALKEIQNLIASDQH--PNIVRWYGVESDQD---FVYLSLERC 549 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~----~~~~~~~Ei~~L~~l~~H--pnIV~l~g~~~~~~---~~~LV~E~~ 549 (613)
+.|+.|.++.||+....+|+.+++|..... ....+.+|.+++..+ .+ .++.+++.+..... ..++||||+
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l-~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRAL-AGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHh-hCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 568999999999976655689999987753 245788999888777 44 45677777776543 568999999
Q ss_pred Cc-cHHH
Q 007199 550 TC-SLND 555 (613)
Q Consensus 550 ~G-sL~~ 555 (613)
+| +|.+
T Consensus 83 ~G~~l~~ 89 (223)
T cd05154 83 DGRVLRD 89 (223)
T ss_pred CCEecCC
Confidence 96 5544
No 463
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=97.50 E-value=0.00043 Score=70.99 Aligned_cols=127 Identities=18% Similarity=0.130 Sum_probs=72.7
Q ss_pred EEEeeeEeecCceEEEEE-EeeCCcEEEEEEeec------cchHHHHHHHHHHHhcCC---------CCcceeEEEEEE-
Q 007199 475 VVFNKEIAKGSNGTVVLE-GNYEGRSVAVKRLVK------THHDVALKEIQNLIASDQ---------HPNIVRWYGVES- 537 (613)
Q Consensus 475 ~~~~~~LG~G~fG~Vyk~-~~~~g~~VAVK~l~~------~~~~~~~~Ei~~L~~l~~---------HpnIV~l~g~~~- 537 (613)
+...+.||.|+++.||.+ +..+|+.+|||.... ...+.+.+|.-....+.. |-.++-.++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 677889999999999997 578899999998764 123355555533322111 212222222221
Q ss_pred --------eC---C-----EEEEEecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH-----HHHHHHhcCCceeeccc
Q 007199 538 --------DQ---D-----FVYLSLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN-----EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 538 --------~~---~-----~~~LV~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~-----~~l~~Lh~~~iiHrDlK 596 (613)
.. . ..+++|+-+.+||.+++..-... ..........+++.+ ..+.+||..+++|.|||
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~-~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~ 172 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSR-AQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK 172 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHH-TTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred cCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhc-ccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence 11 1 24788888889988886542100 111222334443333 77889999999988887
Q ss_pred ----eecCCC
Q 007199 597 ----LWKANG 602 (613)
Q Consensus 597 ----llh~dg 602 (613)
|+.+||
T Consensus 173 ~~nfll~~~G 182 (288)
T PF14531_consen 173 PENFLLDQDG 182 (288)
T ss_dssp GGGEEE-TTS
T ss_pred eeeEEEcCCC
Confidence 666665
No 464
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=97.37 E-value=3.7e-05 Score=84.28 Aligned_cols=117 Identities=21% Similarity=0.126 Sum_probs=84.2
Q ss_pred eEeecCceEEEEE----EeeCCcEEEEEEeeccc-----hHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCC
Q 007199 480 EIAKGSNGTVVLE----GNYEGRSVAVKRLVKTH-----HDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCT 550 (613)
Q Consensus 480 ~LG~G~fG~Vyk~----~~~~g~~VAVK~l~~~~-----~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~ 550 (613)
++|+|+||.|+++ +...|..+|+|.+++.. ......|..++....+||.+|+++-.++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 3799999999984 35567778999887621 11333455566666569999999999999999999999999
Q ss_pred -ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc----eecCCC
Q 007199 551 -CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 551 -GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK----llh~dg 602 (613)
|+|...+.... .+.+.....+.. .++.++|+.+|+|||+| ++..+|
T Consensus 81 gg~lft~l~~~~------~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~G 134 (612)
T KOG0603|consen 81 GGDLFTRLSKEV------MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEG 134 (612)
T ss_pred cchhhhccccCC------chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccC
Confidence 59988776432 222222222222 68899999999999986 555555
No 465
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=97.36 E-value=0.01 Score=60.43 Aligned_cols=156 Identities=13% Similarity=0.101 Sum_probs=96.3
Q ss_pred CCCEEEEEecCC-cEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCce-eeecccHHH
Q 007199 47 EPDVALVAALDG-TIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKM-KKLSSSAEE 124 (613)
Q Consensus 47 ~~~~v~v~t~dG-~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l-~~~~~~~~~ 124 (613)
.+..+++++.++ .++.+|..+++.......+....+. ....+...+++.+..||.++.+|..+|+. ..+.+..+.
T Consensus 125 dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~---~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~ 201 (300)
T TIGR03866 125 DGKIVVNTSETTNMAHFIDTKTYEIVDNVLVDQRPRFA---EFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPG 201 (300)
T ss_pred CCCEEEEEecCCCeEEEEeCCCCeEEEEEEcCCCccEE---EECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccc
Confidence 556677777665 4677788888887765443322111 12333334666666799999999998875 334443221
Q ss_pred ----Hhh-hCceeecCCc-EEEE-eecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccc
Q 007199 125 ----YIR-RMPYISKDGG-VTLG-AMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNL 197 (613)
Q Consensus 125 ----~v~-~sP~~~~dg~-v~~G-s~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (613)
.+. ....++.||. +|++ ..+++++.+|.++|+++.....+.... + -.++|
T Consensus 202 ~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~------------~------~~~~~----- 258 (300)
T TIGR03866 202 VHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLLVGQRVW------------Q------LAFTP----- 258 (300)
T ss_pred cccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEeCCCcc------------e------EEECC-----
Confidence 111 1223455665 4654 445679999999999986654332211 0 01111
Q ss_pred cccccEEEEE-eeeeEEEEEeCCCCceEEEEEec
Q 007199 198 KRIRQLVYIM-RTDYVLQSTSQDSGEVLWNVAYA 230 (613)
Q Consensus 198 ~~~~~~v~ig-r~d~~l~a~d~~~G~~~Wn~t~~ 230 (613)
.+..||++ +.++.|..+|.++|+.+..+.++
T Consensus 259 --~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~ 290 (300)
T TIGR03866 259 --DEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG 290 (300)
T ss_pred --CCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc
Confidence 13377876 56899999999999999998764
No 466
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.27 E-value=0.00094 Score=74.10 Aligned_cols=120 Identities=20% Similarity=0.082 Sum_probs=77.3
Q ss_pred eeEeecCceEEEEEEeeCCcEEEEEEeeccch---------------------------------H----------HHHH
Q 007199 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH---------------------------------D----------VALK 515 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~~---------------------------------~----------~~~~ 515 (613)
+.|+.++-|+||+|...+|+.||||+.++.-. + ++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 67999999999999999999999998876200 0 2345
Q ss_pred HHHHHHhc---C-CCCcceeEEEEEEeCCEEEEEecCCCc-cHHHHHHHhcCCCccccCCHHHHHHHHH-HHHHHHhcCC
Q 007199 516 EIQNLIAS---D-QHPNIVRWYGVESDQDFVYLSLERCTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLN-EVRIRLLPVM 589 (613)
Q Consensus 516 Ei~~L~~l---~-~HpnIV~l~g~~~~~~~~~LV~E~~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~-~~l~~Lh~~~ 589 (613)
|...+.++ . ..+++.-..=|+.......|+|||++| .+.+..... ........+..... ..+.++-..+
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~-----~~g~d~k~ia~~~~~~f~~q~~~dg 285 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK-----SAGIDRKELAELLVRAFLRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH-----hcCCCHHHHHHHHHHHHHHHHHhcC
Confidence 55555443 2 234433333333345677899999999 777774322 12333333333333 6677776655
Q ss_pred ceeeccceecCCCcCcceeee
Q 007199 590 ENTKDIELWKANGHPSAQLLK 610 (613)
Q Consensus 590 iiHrDlKllh~dg~PsniLlk 610 (613)
+ .|.|-||-||++.
T Consensus 286 f-------fHaDpHpGNi~v~ 299 (517)
T COG0661 286 F-------FHADPHPGNILVR 299 (517)
T ss_pred c-------cccCCCccceEEe
Confidence 5 6788899998874
No 467
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.11 E-value=0.0095 Score=60.90 Aligned_cols=102 Identities=13% Similarity=-0.007 Sum_probs=63.5
Q ss_pred eeCCcEEEEEEeeccc--------------hHHHHHHHHHHHhcCCCC--cceeEEEEEEe-----CCEEEEEecCCCc-
Q 007199 494 NYEGRSVAVKRLVKTH--------------HDVALKEIQNLIASDQHP--NIVRWYGVESD-----QDFVYLSLERCTC- 551 (613)
Q Consensus 494 ~~~g~~VAVK~l~~~~--------------~~~~~~Ei~~L~~l~~Hp--nIV~l~g~~~~-----~~~~~LV~E~~~G- 551 (613)
...|+.+.||+..... ...+.+|.+.+.++ ... ..+++.++... ...-+||||+++|
T Consensus 42 ~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L-~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~ 120 (268)
T PRK15123 42 ELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRL-HEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPT 120 (268)
T ss_pred EECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHH-HHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCC
Confidence 4466778888654321 11477888888776 222 23344455543 2357899999997
Q ss_pred -cHHHHHHHhcCCCccccCCHH---HHHHHHHHHHHHHhcCCceeeccc----eecC
Q 007199 552 -SLNDLIYVLSGSFEEQLNAKE---QDSNLLNEVRIRLLPVMENTKDIE----LWKA 600 (613)
Q Consensus 552 -sL~~~L~~~~~~~~~~~~~~~---~~~~~~~~~l~~Lh~~~iiHrDlK----llh~ 600 (613)
+|.+++.... ....... .+.+.+...+..||..+++|+|++ |++.
T Consensus 121 ~sL~~~~~~~~----~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~ 173 (268)
T PRK15123 121 ISLEDYCADWA----TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHL 173 (268)
T ss_pred ccHHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEec
Confidence 8999986421 1111122 333334488899999999999998 5654
No 468
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=97.11 E-value=0.0041 Score=60.73 Aligned_cols=194 Identities=15% Similarity=0.141 Sum_probs=112.0
Q ss_pred CCCCEEEEEecCCcEEEEeCC---CCee-------eEEee-CCCceeeccccccCCCCCeEEEecCCCCeEEEEecC---
Q 007199 46 PEPDVALVAALDGTIHLVDTK---LGKI-------RWSFG-TGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKR--- 111 (613)
Q Consensus 46 ~~~~~v~v~t~dG~l~ald~~---tG~~-------~W~~~-~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~--- 111 (613)
+....+++|+.+|.|-.+..+ +|+. +-.+. -++|+|.- +. ++.+.+.++ ||.+|.+.=+
T Consensus 20 p~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~--~f----~d~~Lls~g-dG~V~gw~W~E~~ 92 (325)
T KOG0649|consen 20 PSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYL--AF----HDDFLLSGG-DGLVYGWEWNEEE 92 (325)
T ss_pred CcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeee--ee----ehhheeecc-CceEEEeeehhhh
Confidence 345779999999998665322 2322 11111 13344332 11 134556666 8999997531
Q ss_pred --CCceeeecccHHHHhhhCcee-------e-cCCcEEEEeecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccc
Q 007199 112 --FGKMKKLSSSAEEYIRRMPYI-------S-KDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVV 181 (613)
Q Consensus 112 --~G~l~~~~~~~~~~v~~sP~~-------~-~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (613)
.+....|...++.-+.++|+= . .++.|++.+-|+.+|.+|.++|++..+|..-...
T Consensus 93 es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDY-------------- 158 (325)
T KOG0649|consen 93 ESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDY-------------- 158 (325)
T ss_pred hhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcce--------------
Confidence 222235666666665554431 1 2455676669999999999999999999743211
Q ss_pred cCCCcccccccccccccccccEEEEEeeeeEEEEEeCCCCceEEEEEeceeeeeecccccCCCcccccccCCCccccccc
Q 007199 182 PVDGYEELVESGVGNLKRIRQLVYIMRTDYVLQSTSQDSGEVLWNVAYADFKAEFRCQEVGKSFSGYHFNSGSELGMDLI 261 (613)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~v~igr~d~~l~a~d~~~G~~~Wn~t~~~~~a~~~~~~~~~~~~~~~~~s~~~~~~~~~ 261 (613)
..++... ..++.|+-|.-|++++.+|.++++..-.+-..+-.. ++.++..+ |-.++.
T Consensus 159 -----vH~vv~R-----~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~-~lRp~~g~------------wigala 215 (325)
T KOG0649|consen 159 -----VHSVVGR-----NANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPN-LLRPDWGK------------WIGALA 215 (325)
T ss_pred -----eeeeeec-----ccCcceeecCCCccEEEEeccccceeEEeccccChh-hcCcccCc------------eeEEEe
Confidence 1111111 124578999999999999999999876655444332 22222221 000110
Q ss_pred CcccccccccccccceEEeeccC
Q 007199 262 GDVESHLPCHTQMTASVYRLRDN 284 (613)
Q Consensus 262 g~~~~~~~~~~~~~~~~~~~~~n 284 (613)
++ +.=+.|..-+++.-|||+.-
T Consensus 216 ~~-edWlvCGgGp~lslwhLrss 237 (325)
T KOG0649|consen 216 VN-EDWLVCGGGPKLSLWHLRSS 237 (325)
T ss_pred cc-CceEEecCCCceeEEeccCC
Confidence 11 23355655677778888864
No 469
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.06 E-value=0.0015 Score=72.35 Aligned_cols=118 Identities=20% Similarity=0.135 Sum_probs=75.3
Q ss_pred eeeEeecCceEEEEEEeeCCcEEEEEEeeccch------------------------------H----------HHHHHH
Q 007199 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTHH------------------------------D----------VALKEI 517 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~~------------------------------~----------~~~~Ei 517 (613)
.+.||.-+.|+||+|.+.+|+.||||+-++.-. + +|.+|.
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 467999999999999999999999998765100 0 245565
Q ss_pred HHHHhc---CCCCc------ceeEEEEEEeCCEEEEEecCCCc-cHH--HHHHHhcCCCccccCCHHHHHHHHHHHHHHH
Q 007199 518 QNLIAS---DQHPN------IVRWYGVESDQDFVYLSLERCTC-SLN--DLIYVLSGSFEEQLNAKEQDSNLLNEVRIRL 585 (613)
Q Consensus 518 ~~L~~l---~~Hpn------IV~l~g~~~~~~~~~LV~E~~~G-sL~--~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~L 585 (613)
+...+. ..|-+ |.+++..+ .....|+||||+| .+. +.|... +.-+.+....+...++++|
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~--st~RVLtME~~~G~~i~Dl~~i~~~------gi~~~~i~~~l~~~~~~qI 317 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDL--STKRVLTMEYVDGIKINDLDAIDKR------GISPHDILNKLVEAYLEQI 317 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhc--CcceEEEEEecCCccCCCHHHHHHc------CCCHHHHHHHHHHHHHHHH
Confidence 544332 35555 44444333 3467899999997 333 445432 2223344444444677777
Q ss_pred hcCCceeeccceecCCCcCcceeee
Q 007199 586 LPVMENTKDIELWKANGHPSAQLLK 610 (613)
Q Consensus 586 h~~~iiHrDlKllh~dg~PsniLlk 610 (613)
...+. +|.|=||-||+++
T Consensus 318 f~~Gf-------fHaDPHPGNilv~ 335 (538)
T KOG1235|consen 318 FKTGF-------FHADPHPGNILVR 335 (538)
T ss_pred HhcCC-------ccCCCCCCcEEEe
Confidence 77666 5666777777775
No 470
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.04 E-value=0.004 Score=59.29 Aligned_cols=105 Identities=16% Similarity=0.140 Sum_probs=70.6
Q ss_pred eEeecCceEEEEEEeeCCcEEEEE-Eeecc----------chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecC
Q 007199 480 EIAKGSNGTVVLEGNYEGRSVAVK-RLVKT----------HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLER 548 (613)
Q Consensus 480 ~LG~G~fG~Vyk~~~~~g~~VAVK-~l~~~----------~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~ 548 (613)
.+++|+-+.+|.+ .+-|..+.+| ++++. ..+...+|.++|.++ +--.|....=++.+.+...|+|||
T Consensus 3 ~i~~GAEa~i~~~-~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a-~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 3 LIKQGAEAIIYLT-DFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKA-REAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred hhhCCcceeEEee-eccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHH-HHcCCCCCeEEEEcCCCCEEEEEE
Confidence 5678999999985 3445566777 34431 122567899888777 544555555566778888999999
Q ss_pred CCc-cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccc
Q 007199 549 CTC-SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIE 596 (613)
Q Consensus 549 ~~G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlK 596 (613)
++| .|.++|... .. -..+-+=..+.-||..+|+|.|+-
T Consensus 81 I~G~~lkd~l~~~---------~~-~~~r~vG~~vg~lH~~givHGDLT 119 (204)
T COG3642 81 IEGELLKDALEEA---------RP-DLLREVGRLVGKLHKAGIVHGDLT 119 (204)
T ss_pred eCChhHHHHHHhc---------ch-HHHHHHHHHHHHHHhcCeecCCCc
Confidence 998 777788752 11 122222256788999999877664
No 471
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=97.03 E-value=0.0018 Score=72.01 Aligned_cols=102 Identities=17% Similarity=0.198 Sum_probs=76.1
Q ss_pred EeeCCcEEEEEEeeccch---HHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEecCCCccHHHHHHHhcCCCccccC
Q 007199 493 GNYEGRSVAVKRLVKTHH---DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSLERCTCSLNDLIYVLSGSFEEQLN 569 (613)
Q Consensus 493 ~~~~g~~VAVK~l~~~~~---~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~E~~~GsL~~~L~~~~~~~~~~~~ 569 (613)
.+.++.+|.|...+.... +...+-++.|+.+ +||||++++..+...+.+|||+|.+.. |..+++.. ...
T Consensus 33 ~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtl-RHP~Il~yL~t~e~~~~~ylvTErV~P-l~~~lk~l------~~~ 104 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTL-RHPNILSYLDTTEEEGTLYLVTERVRP-LETVLKEL------GKE 104 (690)
T ss_pred eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhc-cCchhhhhhhhhcccCceEEEeecccc-HHHHHHHh------HHH
Confidence 467788888888876433 4566777788777 999999999999999999999998873 33334432 123
Q ss_pred CHHHHHHHHHHHHHHHh-cCCceeeccc----eecCCC
Q 007199 570 AKEQDSNLLNEVRIRLL-PVMENTKDIE----LWKANG 602 (613)
Q Consensus 570 ~~~~~~~~~~~~l~~Lh-~~~iiHrDlK----llh~dg 602 (613)
-..|-...+..||.+|| +.+++|.++- |+...|
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~G 142 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESG 142 (690)
T ss_pred HHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCC
Confidence 34566666678999996 7789998887 666655
No 472
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=97.02 E-value=0.011 Score=58.15 Aligned_cols=112 Identities=18% Similarity=0.154 Sum_probs=83.0
Q ss_pred CCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHHHh
Q 007199 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~v 126 (613)
.+.+++-++.|++|+.-|.+||++.=++.+..|+.|- ...++ .-||.-..-+++-.+|+++=.+ .-.+.++--|
T Consensus 154 eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSl---Evs~d--G~ilTia~gssV~Fwdaksf~~-lKs~k~P~nV 227 (334)
T KOG0278|consen 154 EDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSL---EVSQD--GRILTIAYGSSVKFWDAKSFGL-LKSYKMPCNV 227 (334)
T ss_pred cCceEEeeccCCceEEEEeccCcEEEEEecCCCCcce---eeccC--CCEEEEecCceeEEeccccccc-eeeccCcccc
Confidence 7788888899999999999999999999999988765 22333 2455555577888889866444 3455565556
Q ss_pred hhCceeecCCcEEEEeecceEEEEECCCCcEEEEEecC
Q 007199 127 RRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (613)
Q Consensus 127 ~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~ 164 (613)
.++-+--+.+..+.|+.|..+|..|-.||+.+-.|..+
T Consensus 228 ~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkg 265 (334)
T KOG0278|consen 228 ESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKG 265 (334)
T ss_pred ccccccCCCceEEecCcceEEEEEeccCCceeeecccC
Confidence 56544443454446999999999999999999887443
No 473
>PLN00181 protein SPA1-RELATED; Provisional
Probab=97.00 E-value=0.012 Score=69.60 Aligned_cols=157 Identities=10% Similarity=0.065 Sum_probs=98.8
Q ss_pred CCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHH-HH
Q 007199 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAE-EY 125 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~-~~ 125 (613)
.++.++.|+.||+|+..|..+|+..-++.....+..- .........++.++.||.++.+|..+++.....+... ..
T Consensus 587 ~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v---~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~ 663 (793)
T PLN00181 587 DPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCV---QFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKT 663 (793)
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEE---EEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCC
Confidence 3467888999999999999999888777655444432 1111123467778889999999998765311111111 12
Q ss_pred hhhCceeecCCcEEEEeecceEEEEECCCC------cEEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccccc
Q 007199 126 IRRMPYISKDGGVTLGAMKTSVFLVDVKSG------RVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKR 199 (613)
Q Consensus 126 v~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (613)
|.. -.+.++..+++|+.|+++...|..++ +.+..+..-.... . . -.+++
T Consensus 664 V~~-v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i---------~-~-------v~~s~------- 718 (793)
T PLN00181 664 VSY-VRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVK---------N-F-------VGLSV------- 718 (793)
T ss_pred EEE-EEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCe---------e-E-------EEEcC-------
Confidence 211 12233456778999999999998754 3444443111000 0 0 01111
Q ss_pred cccEEEEEeeeeEEEEEeCCCCceEEEEEece
Q 007199 200 IRQLVYIMRTDYVLQSTSQDSGEVLWNVAYAD 231 (613)
Q Consensus 200 ~~~~v~igr~d~~l~a~d~~~G~~~Wn~t~~~ 231 (613)
.+..|..|..|+.|+.++..++.+.|.+++.-
T Consensus 719 ~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~ 750 (793)
T PLN00181 719 SDGYIATGSETNEVFVYHKAFPMPVLSYKFKT 750 (793)
T ss_pred CCCEEEEEeCCCEEEEEECCCCCceEEEeccc
Confidence 13478889999999999999888888876643
No 474
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=96.92 E-value=0.019 Score=59.13 Aligned_cols=155 Identities=14% Similarity=0.116 Sum_probs=104.6
Q ss_pred CCCCEEEEEecCCcEEEEeCCCCeeeEEeeCC--CceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecc--c
Q 007199 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGTG--RPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSS--S 121 (613)
Q Consensus 46 ~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~--~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~--~ 121 (613)
+..+++..|.-|-.=|.-|..||+..-.. +| ..|... .+.-+. .+..-+..||.|..+...+|.. +|++ +
T Consensus 74 P~~~l~aTGGgDD~AflW~~~~ge~~~el-tgHKDSVt~~---~Fshdg-tlLATGdmsG~v~v~~~stg~~-~~~~~~e 147 (399)
T KOG0296|consen 74 PNNNLVATGGGDDLAFLWDISTGEFAGEL-TGHKDSVTCC---SFSHDG-TLLATGDMSGKVLVFKVSTGGE-QWKLDQE 147 (399)
T ss_pred CCCceEEecCCCceEEEEEccCCcceeEe-cCCCCceEEE---EEccCc-eEEEecCCCccEEEEEcccCce-EEEeecc
Confidence 35566777777777777777777733333 22 123221 122221 3555566899999999999999 8888 6
Q ss_pred HHHHhhhCceeecCCcEEEEeecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccccccc
Q 007199 122 AEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIR 201 (613)
Q Consensus 122 ~~~~v~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (613)
+.+++...=.-. --++.+|++|++++.-.+.++.....|.... +|+... .+.| ..
T Consensus 148 ~~dieWl~WHp~-a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~----~~ct~G---~f~p-----------------dG 202 (399)
T KOG0296|consen 148 VEDIEWLKWHPR-AHILLAGSTDGSVWMWQIPSQALCKVMSGHN----SPCTCG---EFIP-----------------DG 202 (399)
T ss_pred cCceEEEEeccc-ccEEEeecCCCcEEEEECCCcceeeEecCCC----CCcccc---cccC-----------------CC
Confidence 777666533322 3467899999999999999887777775422 221111 1111 13
Q ss_pred cEEEEEeeeeEEEEEeCCCCceEEEEEece
Q 007199 202 QLVYIMRTDYVLQSTSQDSGEVLWNVAYAD 231 (613)
Q Consensus 202 ~~v~igr~d~~l~a~d~~~G~~~Wn~t~~~ 231 (613)
.+++-|-.|++|.++|+++|.+.-.++-+|
T Consensus 203 Kr~~tgy~dgti~~Wn~ktg~p~~~~~~~e 232 (399)
T KOG0296|consen 203 KRILTGYDDGTIIVWNPKTGQPLHKITQAE 232 (399)
T ss_pred ceEEEEecCceEEEEecCCCceeEEecccc
Confidence 488999999999999999999999888777
No 475
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=96.86 E-value=0.0036 Score=60.89 Aligned_cols=153 Identities=16% Similarity=0.113 Sum_probs=98.5
Q ss_pred CCCEEEEEecCCcEEEEeCCCC--eeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHH
Q 007199 47 EPDVALVAALDGTIHLVDTKLG--KIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEE 124 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG--~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~ 124 (613)
+..+|+-|++|-++++-|-++- +++=.+.+-.--+++ .+.+++-++.|+.||++-.+|.+.|.+ ..-.+++
T Consensus 112 esSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~S-----i~v~~heIvaGS~DGtvRtydiR~G~l--~sDy~g~ 184 (307)
T KOG0316|consen 112 ESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSS-----IDVAEHEIVAGSVDGTVRTYDIRKGTL--SSDYFGH 184 (307)
T ss_pred cceEEEeccccceeEEEEcccCCCCccchhhhhcCceeE-----EEecccEEEeeccCCcEEEEEeeccee--ehhhcCC
Confidence 3367888999999999996653 333333221111111 111245789999999999999999988 1222333
Q ss_pred HhhhCceeecCCc-EEEEeecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCcccccccccccccccccE
Q 007199 125 YIRRMPYISKDGG-VTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQL 203 (613)
Q Consensus 125 ~v~~sP~~~~dg~-v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (613)
+| .+-.++.||. +.+|+-++++..||..||+++..|..-.... .-.+ .|. . ..+..
T Consensus 185 pi-t~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~e---ykld----c~l--------~-------qsdth 241 (307)
T KOG0316|consen 185 PI-TSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNME---YKLD----CCL--------N-------QSDTH 241 (307)
T ss_pred cc-eeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccce---eeee----eee--------c-------cccee
Confidence 34 2344677775 5689999999999999999999886432210 0000 111 0 12447
Q ss_pred EEEEeeeeEEEEEeCCCCceEEEEEe
Q 007199 204 VYIMRTDYVLQSTSQDSGEVLWNVAY 229 (613)
Q Consensus 204 v~igr~d~~l~a~d~~~G~~~Wn~t~ 229 (613)
|+=|+-|+.||-+|-.++..+=.+.+
T Consensus 242 V~sgSEDG~Vy~wdLvd~~~~sk~~~ 267 (307)
T KOG0316|consen 242 VFSGSEDGKVYFWDLVDETQISKLSV 267 (307)
T ss_pred EEeccCCceEEEEEeccceeeeeecc
Confidence 77799999999999888776655443
No 476
>PRK09902 hypothetical protein; Provisional
Probab=96.85 E-value=0.022 Score=55.82 Aligned_cols=123 Identities=13% Similarity=0.046 Sum_probs=78.0
Q ss_pred eecCceEEEEEEeeCCcEEEEEEee---------ccchHHHHHHHHHHHhcCCC-CcceeEEEEEEeC----CEEEEEec
Q 007199 482 AKGSNGTVVLEGNYEGRSVAVKRLV---------KTHHDVALKEIQNLIASDQH-PNIVRWYGVESDQ----DFVYLSLE 547 (613)
Q Consensus 482 G~G~fG~Vyk~~~~~g~~VAVK~l~---------~~~~~~~~~Ei~~L~~l~~H-pnIV~l~g~~~~~----~~~~LV~E 547 (613)
|+|+-+.|+. ...+|..+=+|+-. +.....|.+|...|.++-.. -.+.++..+.... -.-+||+|
T Consensus 27 ~rgG~SgV~r-~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVTe 105 (216)
T PRK09902 27 RRNGMSGVQC-VERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVTE 105 (216)
T ss_pred CCCCcceEEE-EEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEEE
Confidence 4577777776 33445567778665 23456899999988887221 2244554222222 24789999
Q ss_pred CCCc--cHHHHHHHhcCCCccccCCH---HHHHHHHHHHHHHHhcCCceeeccc----eecCCCcCcceee
Q 007199 548 RCTC--SLNDLIYVLSGSFEEQLNAK---EQDSNLLNEVRIRLLPVMENTKDIE----LWKANGHPSAQLL 609 (613)
Q Consensus 548 ~~~G--sL~~~L~~~~~~~~~~~~~~---~~~~~~~~~~l~~Lh~~~iiHrDlK----llh~dg~PsniLl 609 (613)
-++| ||.+++.... ....+. ..+...+...+..||..++.|+|+. +++.+++++=-+|
T Consensus 106 ~L~g~~~L~~~l~~~~----~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lI 172 (216)
T PRK09902 106 DMAGFISIADWYAQHA----VSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFL 172 (216)
T ss_pred eCCCCccHHHHHhcCC----cCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEE
Confidence 9986 9999986531 111122 2333334488999999999999998 6676675544444
No 477
>PTZ00421 coronin; Provisional
Probab=96.65 E-value=0.043 Score=61.09 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=71.8
Q ss_pred CCCEEEEEecCCcEEEEeCCCCee-------eEEeeC-CCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeee
Q 007199 47 EPDVALVAALDGTIHLVDTKLGKI-------RWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKL 118 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG~~-------~W~~~~-~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~ 118 (613)
.++.++.|+.||+|+.-|..++.. +-++.. ..+|..- ....+...+++.++.||.+..+|..+|.. .-
T Consensus 87 d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l---~f~P~~~~iLaSgs~DgtVrIWDl~tg~~-~~ 162 (493)
T PTZ00421 87 DPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIV---SFHPSAMNVLASAGADMVVNVWDVERGKA-VE 162 (493)
T ss_pred CCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEE---EeCcCCCCEEEEEeCCCEEEEEECCCCeE-EE
Confidence 346888999999999998776532 223321 1122211 11111124677778899999999998876 33
Q ss_pred cccHH-HHhhhCceeecCCc-EEEEeecceEEEEECCCCcEEEEEec
Q 007199 119 SSSAE-EYIRRMPYISKDGG-VTLGAMKTSVFLVDVKSGRVVDNYVL 163 (613)
Q Consensus 119 ~~~~~-~~v~~sP~~~~dg~-v~~Gs~~~~~~~vD~~tG~~~~~~~~ 163 (613)
.+... +.|.+ -..+.||. +++|++|+++...|+.+|+.+..+..
T Consensus 163 ~l~~h~~~V~s-la~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~ 208 (493)
T PTZ00421 163 VIKCHSDQITS-LEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEA 208 (493)
T ss_pred EEcCCCCceEE-EEEECCCCEEEEecCCCEEEEEECCCCcEEEEEec
Confidence 33321 22222 22334664 56799999999999999999887753
No 478
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=96.63 E-value=0.029 Score=62.35 Aligned_cols=175 Identities=13% Similarity=0.063 Sum_probs=83.5
Q ss_pred CCCCEEEEEe----cCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeeccc
Q 007199 46 PEPDVALVAA----LDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSS 121 (613)
Q Consensus 46 ~~~~~v~v~t----~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~ 121 (613)
..+++.++.. ..+..|++|. +|.++|.+.....-... ...+.. ..++ ... ...++.+|.- |++ .|.++
T Consensus 112 ~~~gl~~~~~~~~~~~~~~~~iD~-~G~Vrw~~~~~~~~~~~-~~~l~n--G~ll-~~~-~~~~~e~D~~-G~v-~~~~~ 183 (477)
T PF05935_consen 112 MEDGLYFVNGNDWDSSSYTYLIDN-NGDVRWYLPLDSGSDNS-FKQLPN--GNLL-IGS-GNRLYEIDLL-GKV-IWEYD 183 (477)
T ss_dssp -TT-EEEEEETT--BEEEEEEEET-TS-EEEEE-GGGT--SS-EEE-TT--S-EE-EEE-BTEEEEE-TT---E-EEEEE
T ss_pred cCCcEEEEeCCCCCCCceEEEECC-CccEEEEEccCccccce-eeEcCC--CCEE-Eec-CCceEEEcCC-CCE-EEeee
Confidence 4667777776 6789999995 59999999654332211 000111 1233 333 3888899886 888 88888
Q ss_pred HHH---HhhhCceeecCCcEEE-Eee-------------cceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCC
Q 007199 122 AEE---YIRRMPYISKDGGVTL-GAM-------------KTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVD 184 (613)
Q Consensus 122 ~~~---~v~~sP~~~~dg~v~~-Gs~-------------~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (613)
++. .++..-....+|.+++ +.. .+.++.|| .||+++|.++..+-..................
T Consensus 184 l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~ 262 (477)
T PF05935_consen 184 LPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDIS 262 (477)
T ss_dssp --TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS
T ss_pred cCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccc
Confidence 887 3355555555765554 442 56799999 99999999997654310000000000000000
Q ss_pred Ccccccccccccccc---cccEEEE-EeeeeEEEEEeCCCCceEEEEEe
Q 007199 185 GYEELVESGVGNLKR---IRQLVYI-MRTDYVLQSTSQDSGEVLWNVAY 229 (613)
Q Consensus 185 ~~~~~~~~~~~~~~~---~~~~v~i-gr~d~~l~a~d~~~G~~~Wn~t~ 229 (613)
+.....+....+.-. .++.|++ .|....|..+|.++|+..|-+.-
T Consensus 263 ~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wilg~ 311 (477)
T PF05935_consen 263 GSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWILGP 311 (477)
T ss_dssp -SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEES-
T ss_pred cCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEeCC
Confidence 001111222222111 2445555 55555899999999999998754
No 479
>PTZ00420 coronin; Provisional
Probab=96.60 E-value=0.057 Score=60.88 Aligned_cols=143 Identities=11% Similarity=0.082 Sum_probs=87.9
Q ss_pred EEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHHHhhhC
Q 007199 50 VALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRM 129 (613)
Q Consensus 50 ~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~v~~s 129 (613)
++..|+.||+|...|..+|+..+++.....|.+- ....++ .+++.++.|+.+..+|.++|.. .-.+...+-...+
T Consensus 140 iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~Sl---swspdG-~lLat~s~D~~IrIwD~Rsg~~-i~tl~gH~g~~~s 214 (568)
T PTZ00420 140 IMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSL---KWNIKG-NLLSGTCVGKHMHIIDPRKQEI-ASSFHIHDGGKNT 214 (568)
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEE---EECCCC-CEEEEEecCCEEEEEECCCCcE-EEEEecccCCcee
Confidence 3456789999999999999999998765566543 122222 4666677799999999999877 3334332211111
Q ss_pred cee------ecCCcEEEEeecc----eEEEEECCC-CcEEEEEecCCCCCC-CCCcCCCCCccccCCCcccccccccccc
Q 007199 130 PYI------SKDGGVTLGAMKT----SVFLVDVKS-GRVVDNYVLDFSAST-PGFQSDENKHVVPVDGYEELVESGVGNL 197 (613)
Q Consensus 130 P~~------~~dg~v~~Gs~~~----~~~~vD~~t-G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (613)
-++ .+++.+.+++.++ ++..-|..+ ++.+..+..+..... .|.++.
T Consensus 215 ~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~---------------------- 272 (568)
T PTZ00420 215 KNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDE---------------------- 272 (568)
T ss_pred EEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeC----------------------
Confidence 111 2234556655553 688888884 677766654332110 111110
Q ss_pred ccccc-EEEEEeeeeEEEEEeCCCC
Q 007199 198 KRIRQ-LVYIMRTDYVLQSTSQDSG 221 (613)
Q Consensus 198 ~~~~~-~v~igr~d~~l~a~d~~~G 221 (613)
..+ .+..|+.|++|+.++-.+|
T Consensus 273 --~tg~l~lsGkGD~tIr~~e~~~~ 295 (568)
T PTZ00420 273 --STGLIYLIGKGDGNCRYYQHSLG 295 (568)
T ss_pred --CCCCEEEEEECCCeEEEEEccCC
Confidence 122 4456889999999998766
No 480
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=96.55 E-value=0.0072 Score=58.38 Aligned_cols=100 Identities=19% Similarity=0.054 Sum_probs=55.8
Q ss_pred EEEEEEeeCCcEEEEEEeecc---------------c--------------hHHHHHHHHHHHhcCCC-CcceeEEEEEE
Q 007199 488 TVVLEGNYEGRSVAVKRLVKT---------------H--------------HDVALKEIQNLIASDQH-PNIVRWYGVES 537 (613)
Q Consensus 488 ~Vyk~~~~~g~~VAVK~l~~~---------------~--------------~~~~~~Ei~~L~~l~~H-pnIV~l~g~~~ 537 (613)
.||.|...+|..+|||..+.. . .....+|.+.|.++... -++.+++.+.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 388887788999999977631 0 11467899999888332 2567776543
Q ss_pred eCCEEEEEecCCC--c-cHHHHHHHhcCCCccccCCHHHHHHHHHH-HHHHHhcCCceeeccc
Q 007199 538 DQDFVYLSLERCT--C-SLNDLIYVLSGSFEEQLNAKEQDSNLLNE-VRIRLLPVMENTKDIE 596 (613)
Q Consensus 538 ~~~~~~LV~E~~~--G-sL~~~L~~~~~~~~~~~~~~~~~~~~~~~-~l~~Lh~~~iiHrDlK 596 (613)
.-.|||||++ | .+..+.... .. ......+...++. ...-+|..+++|.|+.
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~----~~-~~~~~~~~~~il~~~~~~~~~~givHGDLs 134 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD----LS-PEEPKELLEEILEEIIKMLHKAGIVHGDLS 134 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG----GG-GSTHHHHHHHHHHHHHHHHHCTTEEESS-S
T ss_pred ---CCEEEEEecCCCccchhhHHhcc----cc-chhHHHHHHHHHHHHHHHHHhcCceecCCC
Confidence 2369999999 7 444433321 01 1222223333333 4445689999887776
No 481
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=96.55 E-value=0.096 Score=56.77 Aligned_cols=112 Identities=15% Similarity=0.254 Sum_probs=67.4
Q ss_pred CCCCCCCEEEEEecCC---cEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCC--eEEEEecCCCceee
Q 007199 43 PLPPEPDVALVAALDG---TIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDW--ELYFHSKRFGKMKK 117 (613)
Q Consensus 43 ~~~~~~~~v~v~t~dG---~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG--~lY~~~~~~G~l~~ 117 (613)
..++.+..+++.+.++ .||.+|..+|+..-.....+...+. ....++..+++....+| .||.++..+|..++
T Consensus 196 ~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~---~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~ 272 (417)
T TIGR02800 196 AWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAP---AFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTR 272 (417)
T ss_pred cCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccce---EECCCCCEEEEEECCCCCccEEEEECCCCCEEE
Confidence 3445666676666543 7999999999765433222222221 12233334555444444 59999999887755
Q ss_pred ecccHHHHhhhCceeecCCc-EEEEeec---ceEEEEECCCCcEEE
Q 007199 118 LSSSAEEYIRRMPYISKDGG-VTLGAMK---TSVFLVDVKSGRVVD 159 (613)
Q Consensus 118 ~~~~~~~~v~~sP~~~~dg~-v~~Gs~~---~~~~~vD~~tG~~~~ 159 (613)
+.- ......+|..+.||. +++.+.. ..+|.+|+.+|+...
T Consensus 273 l~~--~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~ 316 (417)
T TIGR02800 273 LTN--GPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRR 316 (417)
T ss_pred CCC--CCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEE
Confidence 432 223345677776774 5555432 269999999888653
No 482
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=96.53 E-value=0.0066 Score=59.08 Aligned_cols=113 Identities=20% Similarity=0.211 Sum_probs=85.3
Q ss_pred CCCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecc----c
Q 007199 46 PEPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSS----S 121 (613)
Q Consensus 46 ~~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~----~ 121 (613)
+.+..++.|+.||+++-.|.+-|++-=-+ .+.||.+-... ++. ...+.++.|+.|..+|..||++ .-.| +
T Consensus 153 v~~heIvaGS~DGtvRtydiR~G~l~sDy-~g~pit~vs~s--~d~--nc~La~~l~stlrLlDk~tGkl-L~sYkGhkn 226 (307)
T KOG0316|consen 153 VAEHEIVAGSVDGTVRTYDIRKGTLSSDY-FGHPITSVSFS--KDG--NCSLASSLDSTLRLLDKETGKL-LKSYKGHKN 226 (307)
T ss_pred ecccEEEeeccCCcEEEEEeecceeehhh-cCCcceeEEec--CCC--CEEEEeeccceeeecccchhHH-HHHhccccc
Confidence 47788999999999999999999987665 57788765211 222 3667788899999999999988 2222 2
Q ss_pred HHHHhhhCceeecCCcEEEEeecceEEEEECCCCcEEEEEecCC
Q 007199 122 AEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLDF 165 (613)
Q Consensus 122 ~~~~v~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~ 165 (613)
++--+..+-..+ |-.|+-||.|+.+|.-|...+.++-++...+
T Consensus 227 ~eykldc~l~qs-dthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~ 269 (307)
T KOG0316|consen 227 MEYKLDCCLNQS-DTHVFSGSEDGKVYFWDLVDETQISKLSVVS 269 (307)
T ss_pred ceeeeeeeeccc-ceeEEeccCCceEEEEEeccceeeeeeccCC
Confidence 222233443344 7779999999999999999999999887654
No 483
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=96.44 E-value=0.0018 Score=71.09 Aligned_cols=122 Identities=18% Similarity=0.149 Sum_probs=90.4
Q ss_pred EEEeeeEee--cCceEEEEEE---eeCCcEEEEEEeec--c---chHHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEE
Q 007199 475 VVFNKEIAK--GSNGTVVLEG---NYEGRSVAVKRLVK--T---HHDVALKEIQNLIASDQHPNIVRWYGVESDQDFVYL 544 (613)
Q Consensus 475 ~~~~~~LG~--G~fG~Vyk~~---~~~g~~VAVK~l~~--~---~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~L 544 (613)
+...+.+|+ |.+|.||.+. ..++..+|+|+-+. . ....-.+|....++...|+|.++.+..+...+..|+
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfi 195 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFI 195 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCccee
Confidence 566778899 9999999953 57788899997332 1 122344566666667789999999999999999999
Q ss_pred EecCCCccHHHHHHHhcCCCccccCCHHHHHHHHH---H----HHHHHhcCCceeeccc----eecCC
Q 007199 545 SLERCTCSLNDLIYVLSGSFEEQLNAKEQDSNLLN---E----VRIRLLPVMENTKDIE----LWKAN 601 (613)
Q Consensus 545 V~E~~~GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~----~l~~Lh~~~iiHrDlK----llh~d 601 (613)
-+|+|..+|.++.+... ..++.......+. + |+.++|...++|-|+| +++.|
T Consensus 196 qtE~~~~sl~~~~~~~~-----~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~ 258 (524)
T KOG0601|consen 196 QTELCGESLQSYCHTPC-----NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSD 258 (524)
T ss_pred eeccccchhHHhhhccc-----ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccc
Confidence 99999999999988632 2222222222222 5 9999999999999998 66666
No 484
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=96.43 E-value=0.16 Score=53.78 Aligned_cols=115 Identities=11% Similarity=-0.001 Sum_probs=84.4
Q ss_pred CCCEEEEEecC-----CcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecC---------CCCeEEEEecCC
Q 007199 47 EPDVALVAALD-----GTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVD---------EDWELYFHSKRF 112 (613)
Q Consensus 47 ~~~~v~v~t~d-----G~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~---------~DG~lY~~~~~~ 112 (613)
....+||.+.. |+||.+|..+++++=++++|..=..- +..|+..+|+..+ ++..|=.+|..+
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~~~----~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t 86 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPNPV----VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQT 86 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCcee----ECCCCCEEEEEeccccccccCCCCCEEEEEECcc
Confidence 45678888876 99999999999999999886421111 2334457899999 999999999999
Q ss_pred CceeeecccHH----HHhhhCc---eeecCC-cEEEEe-e-cceEEEEECCCCcEEEEEecCCC
Q 007199 113 GKMKKLSSSAE----EYIRRMP---YISKDG-GVTLGA-M-KTSVFLVDVKSGRVVDNYVLDFS 166 (613)
Q Consensus 113 G~l~~~~~~~~----~~v~~sP---~~~~dg-~v~~Gs-~-~~~~~~vD~~tG~~~~~~~~~~~ 166 (613)
++. .....++ .++-..| .++.|| .+|+.. . +..+-.||..+|+++.+...+++
T Consensus 87 ~~~-~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~ 149 (352)
T TIGR02658 87 HLP-IADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDC 149 (352)
T ss_pred CcE-EeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCC
Confidence 988 4333332 1122222 245677 488876 3 68999999999999999988764
No 485
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=96.41 E-value=0.052 Score=53.94 Aligned_cols=122 Identities=21% Similarity=0.179 Sum_probs=85.6
Q ss_pred CCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccc--------------------------c--cc---CCC----
Q 007199 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQ--------------------------A--SF---NSN---- 91 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~--------------------------~--~~---~~~---- 91 (613)
....++.|+.|-++..-|-+||+++-+++++.|+....- . +. ..+
T Consensus 63 ~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~k 142 (327)
T KOG0643|consen 63 DSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLK 142 (327)
T ss_pred CcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEE
Confidence 456788899999999999999999999998887554310 0 00 000
Q ss_pred ---------------CCeEEEecCCCCeEEEEecCCCceeeecccHHHHhhhCceeecCCcEE-EEeecceEEEEECCCC
Q 007199 92 ---------------ASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDGGVT-LGAMKTSVFLVDVKSG 155 (613)
Q Consensus 92 ---------------~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~v~~sP~~~~dg~v~-~Gs~~~~~~~vD~~tG 155 (613)
.+..+|-|-.||+|-.+|+++|.+..-.-....---..-..+.|...| +||+|++-..+|-.|=
T Consensus 143 I~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl 222 (327)
T KOG0643|consen 143 IPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTL 222 (327)
T ss_pred ecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccce
Confidence 024567777899999999999866222222221111122345577677 5999999999999999
Q ss_pred cEEEEEecCCCCC
Q 007199 156 RVVDNYVLDFSAS 168 (613)
Q Consensus 156 ~~~~~~~~~~~~~ 168 (613)
+++.+|.++.+..
T Consensus 223 ~v~Kty~te~PvN 235 (327)
T KOG0643|consen 223 EVLKTYTTERPVN 235 (327)
T ss_pred eeEEEeeeccccc
Confidence 9999999987754
No 486
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=96.27 E-value=0.012 Score=57.67 Aligned_cols=113 Identities=16% Similarity=0.204 Sum_probs=77.1
Q ss_pred CCEEEEEecCCcEEEEe------CCCCeeeEEeeCCCceee-ccccc------cCCCCCeEEEecCCCCeEEEEecCCCc
Q 007199 48 PDVALVAALDGTIHLVD------TKLGKIRWSFGTGRPIYS-SYQAS------FNSNASEFYLDVDEDWELYFHSKRFGK 114 (613)
Q Consensus 48 ~~~v~v~t~dG~l~ald------~~tG~~~W~~~~~~~i~s-~~~~~------~~~~~~~~~i~~~~DG~lY~~~~~~G~ 114 (613)
++.++ +.-||.||+.. ..--|.+|... .|... +...| ++...+.++..++ ||-+|++|.++|+
T Consensus 72 d~~Ll-s~gdG~V~gw~W~E~~es~~~K~lwe~~--~P~~~~~~evPeINam~ldP~enSi~~AgG-D~~~y~~dlE~G~ 147 (325)
T KOG0649|consen 72 DDFLL-SGGDGLVYGWEWNEEEESLATKRLWEVK--IPMQVDAVEVPEINAMWLDPSENSILFAGG-DGVIYQVDLEDGR 147 (325)
T ss_pred hhhee-eccCceEEEeeehhhhhhccchhhhhhc--CccccCcccCCccceeEeccCCCcEEEecC-CeEEEEEEecCCE
Confidence 34444 56679999984 23346788765 33332 11111 1111135666776 9999999999999
Q ss_pred eeeecccHHHHhhhCceeecCCcEEEEeecceEEEEECCCCcEEEEEecC
Q 007199 115 MKKLSSSAEEYIRRMPYISKDGGVTLGAMKTSVFLVDVKSGRVVDNYVLD 164 (613)
Q Consensus 115 l~~~~~~~~~~v~~sP~~~~dg~v~~Gs~~~~~~~vD~~tG~~~~~~~~~ 164 (613)
.++----=-++|++--.+...+.|+.|+.|++.-.-|.+||+-+......
T Consensus 148 i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~y 197 (325)
T KOG0649|consen 148 IQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPY 197 (325)
T ss_pred EEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEeccc
Confidence 95444344467777555667899999999999999999999999877643
No 487
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=96.22 E-value=0.044 Score=58.15 Aligned_cols=149 Identities=19% Similarity=0.132 Sum_probs=101.1
Q ss_pred CCCEEEEEecCCc--EEEEeCCCCeeeEEeeC-CCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeee--ccc
Q 007199 47 EPDVALVAALDGT--IHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKL--SSS 121 (613)
Q Consensus 47 ~~~~v~v~t~dG~--l~ald~~tG~~~W~~~~-~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~--~~~ 121 (613)
.--+++++.+||+ ||.||.++-..+=++.. +-||... ...+ ++...++.++.--.+|.+|..++++.++ ++.
T Consensus 224 ~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a--~f~p-~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g 300 (514)
T KOG2055|consen 224 TAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKA--EFAP-NGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYG 300 (514)
T ss_pred CCceEEEecCCCcEEEEEecCccChhheeeeeccCcccee--eecC-CCceEEEecccceEEEEeeccccccccccCCCC
Confidence 3467999999995 58889888776666654 4577766 2222 3334677788899999999988876444 455
Q ss_pred HHHHhhhCceeecCC-cEEEEeecceEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCccccccccccccccc
Q 007199 122 AEEYIRRMPYISKDG-GVTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRI 200 (613)
Q Consensus 122 ~~~~v~~sP~~~~dg-~v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (613)
.++.....--++.|+ .|-+-+..|.++.|-++||+.+-.|...+.+... ++++ .
T Consensus 301 ~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~KieG~v~~~------------------~fsS-------d 355 (514)
T KOG2055|consen 301 VEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKIEGVVSDF------------------TFSS-------D 355 (514)
T ss_pred cccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeeeccEEeeE------------------EEec-------C
Confidence 554444444455555 4556788899999999999999999988754311 1111 0
Q ss_pred ccEEEEEeeeeEEEEEeCCCCce
Q 007199 201 RQLVYIMRTDYVLQSTSQDSGEV 223 (613)
Q Consensus 201 ~~~v~igr~d~~l~a~d~~~G~~ 223 (613)
...|++-..++.|+.+|-.....
T Consensus 356 sk~l~~~~~~GeV~v~nl~~~~~ 378 (514)
T KOG2055|consen 356 SKELLASGGTGEVYVWNLRQNSC 378 (514)
T ss_pred CcEEEEEcCCceEEEEecCCcce
Confidence 22666666677777777655443
No 488
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=96.20 E-value=0.0022 Score=70.38 Aligned_cols=117 Identities=16% Similarity=0.028 Sum_probs=80.0
Q ss_pred eEEEeeeEeecCceEEEEEE--eeCCcEEEEEEeeccc---h--HHHHHHHHHHHhcCCCCcceeEEEEEEeCCEEEEEe
Q 007199 474 LVVFNKEIAKGSNGTVVLEG--NYEGRSVAVKRLVKTH---H--DVALKEIQNLIASDQHPNIVRWYGVESDQDFVYLSL 546 (613)
Q Consensus 474 ~~~~~~~LG~G~fG~Vyk~~--~~~g~~VAVK~l~~~~---~--~~~~~Ei~~L~~l~~HpnIV~l~g~~~~~~~~~LV~ 546 (613)
.|.....||.|.|+.|+++. ..++..+++|.+.+.- . ..-..|+.+...+..|.++++++..|...+..|+-.
T Consensus 266 df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~ 345 (524)
T KOG0601|consen 266 DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPL 345 (524)
T ss_pred CcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCch
Confidence 37788899999999999964 3567889999877521 1 123456655556678999999999998888999999
Q ss_pred cCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH---HHHHHHhcCCceeeccc
Q 007199 547 ERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN---EVRIRLLPVMENTKDIE 596 (613)
Q Consensus 547 E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHrDlK 596 (613)
|||. +++...+. -...+.++...++.. .++.++|++.++|+|+|
T Consensus 346 e~~~~~s~~l~~~------~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~ 393 (524)
T KOG0601|consen 346 EFCEGGSSSLRSV------TSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVK 393 (524)
T ss_pred hhhcCcchhhhhH------HHHhcCcchhhhhHHHHHhccccccchhhhccccc
Confidence 9998 55443332 111222333333333 67788887777665554
No 489
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=96.19 E-value=0.049 Score=53.10 Aligned_cols=116 Identities=16% Similarity=0.166 Sum_probs=80.4
Q ss_pred eeeEeecCceEEEEEEeeCCcEEEEEEeeccc-------------------hHHHHHHHHHHHhc-----CCCCcceeEE
Q 007199 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH-------------------HDVALKEIQNLIAS-----DQHPNIVRWY 533 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~-------------------~~~~~~Ei~~L~~l-----~~HpnIV~l~ 533 (613)
...||+|+.=.||. ..+.....||++.... .++..+|+.....+ ..+.+|.+++
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 45789999999996 3344456788777655 55677777655444 2478999999
Q ss_pred EEEEeCCEEEEEecCCC---c----cHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhcCCceeeccceecCCCcCcc
Q 007199 534 GVESDQDFVYLSLERCT---C----SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLPVMENTKDIELWKANGHPSA 606 (613)
Q Consensus 534 g~~~~~~~~~LV~E~~~---G----sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~~~iiHrDlKllh~dg~Psn 606 (613)
|+.+++.-.-+|+|.+. | +|.+++... .+.. .....+.+...+|....|+.+|+ +|+|
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~-------~~~~-~~~~~L~~f~~~l~~~~Iv~~dl-------~~~N 148 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEG-------GLTE-ELRQALDEFKRYLLDHHIVIRDL-------NPHN 148 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHcC-------CccH-HHHHHHHHHHHHHHHcCCeecCC-------Cccc
Confidence 99999998899999864 4 788888642 2333 44444446777888888866555 5555
Q ss_pred eeee
Q 007199 607 QLLK 610 (613)
Q Consensus 607 iLlk 610 (613)
|++.
T Consensus 149 Iv~~ 152 (199)
T PF10707_consen 149 IVVQ 152 (199)
T ss_pred EEEE
Confidence 5553
No 490
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=96.15 E-value=0.041 Score=53.87 Aligned_cols=89 Identities=16% Similarity=0.072 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHhcC-CCCcceeEEEEEEeCC----EEEEEecCCCc--cHHHHHHHhcCCCccccCCHHHHHHHHHHHHH
Q 007199 511 DVALKEIQNLIASD-QHPNIVRWYGVESDQD----FVYLSLERCTC--SLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRI 583 (613)
Q Consensus 511 ~~~~~Ei~~L~~l~-~HpnIV~l~g~~~~~~----~~~LV~E~~~G--sL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~ 583 (613)
..+.+|.+.+..+. ..=...+.+++.+... ..+||+|+++| +|.+++.... .........+.+.+...+.
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~---~~~~~~~~~ll~~l~~~i~ 132 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE---QLDPSQRRELLRALARLIA 132 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc---ccchhhHHHHHHHHHHHHH
Confidence 36778887776661 1224556666666532 46899999996 8999998632 1111223344445558899
Q ss_pred HHhcCCceeeccc----eecCCC
Q 007199 584 RLLPVMENTKDIE----LWKANG 602 (613)
Q Consensus 584 ~Lh~~~iiHrDlK----llh~dg 602 (613)
.||..+++|+|++ |++.+.
T Consensus 133 ~lH~~gi~H~Dl~~~NILv~~~~ 155 (206)
T PF06293_consen 133 KLHDAGIYHGDLNPSNILVDPDD 155 (206)
T ss_pred HHHHCcCCCCCCCcccEEEeCCC
Confidence 9999999988887 555553
No 491
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=96.11 E-value=0.022 Score=56.83 Aligned_cols=118 Identities=22% Similarity=0.119 Sum_probs=71.9
Q ss_pred eeeEeecCceEEEEEEeeCCcEEEEEEeeccc----------------------h-----HHHHHHHHHHHhc-CCCCcc
Q 007199 478 NKEIAKGSNGTVVLEGNYEGRSVAVKRLVKTH----------------------H-----DVALKEIQNLIAS-DQHPNI 529 (613)
Q Consensus 478 ~~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~~----------------------~-----~~~~~Ei~~L~~l-~~HpnI 529 (613)
.-.|++|.-+.||+|...++..+|||+.+... . ....+|...|.++ -.+-.+
T Consensus 53 ~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrv 132 (268)
T COG1718 53 VGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRV 132 (268)
T ss_pred EeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 44788899999999888889999999887410 0 0356788888776 123345
Q ss_pred eeEEEEEEeCCEEEEEecCCC--ccHHHHHHHhcCCCccccCCHHHHHHHHHHHHHHHhc-CCceeeccc----eecCCC
Q 007199 530 VRWYGVESDQDFVYLSLERCT--CSLNDLIYVLSGSFEEQLNAKEQDSNLLNEVRIRLLP-VMENTKDIE----LWKANG 602 (613)
Q Consensus 530 V~l~g~~~~~~~~~LV~E~~~--GsL~~~L~~~~~~~~~~~~~~~~~~~~~~~~l~~Lh~-~~iiHrDlK----llh~dg 602 (613)
.+.+.+. .-.|||||++ |.-.-.|+.-. .... ....+...+++++.-|-. .+.+|.||. |+| ++
T Consensus 133 P~Pi~~~----~nVLvMEfIg~~g~pAP~LkDv~---~e~~-e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~ 203 (268)
T COG1718 133 PEPIAFR----NNVLVMEFIGDDGLPAPRLKDVP---LELE-EAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DG 203 (268)
T ss_pred CCceeec----CCeEEEEeccCCCCCCCCcccCC---cCch-hHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CC
Confidence 5555544 2469999998 32222232210 0000 112223333366666655 899999998 677 55
Q ss_pred cC
Q 007199 603 HP 604 (613)
Q Consensus 603 ~P 604 (613)
.|
T Consensus 204 ~p 205 (268)
T COG1718 204 EP 205 (268)
T ss_pred eE
Confidence 54
No 492
>PRK05137 tolB translocation protein TolB; Provisional
Probab=96.11 E-value=0.27 Score=53.93 Aligned_cols=110 Identities=14% Similarity=0.262 Sum_probs=66.3
Q ss_pred CCCCEEEEEec---CCcEEEEeCCCCeeeEEee-CCCceeeccccccCCCCCeEEEecCCCCe--EEEEecCCCceeeec
Q 007199 46 PEPDVALVAAL---DGTIHLVDTKLGKIRWSFG-TGRPIYSSYQASFNSNASEFYLDVDEDWE--LYFHSKRFGKMKKLS 119 (613)
Q Consensus 46 ~~~~~v~v~t~---dG~l~ald~~tG~~~W~~~-~~~~i~s~~~~~~~~~~~~~~i~~~~DG~--lY~~~~~~G~l~~~~ 119 (613)
+.+..+++.+. ++.||..|..+|+.. .+. ..+.+... ....+...+++..+.||+ ||.+|..+|.++++.
T Consensus 211 pDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~---~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~Lt 286 (435)
T PRK05137 211 PNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAP---RFSPDGRKVVMSLSQGGNTDIYTMDLRSGTTTRLT 286 (435)
T ss_pred CCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCc---EECCCCCEEEEEEecCCCceEEEEECCCCceEEcc
Confidence 35555554443 358999999998764 222 22223221 122333345444555554 999999988875543
Q ss_pred ccHHHHhhhCceeecCCc-EEEEe-ec--ceEEEEECCCCcEEEEE
Q 007199 120 SSAEEYIRRMPYISKDGG-VTLGA-MK--TSVFLVDVKSGRVVDNY 161 (613)
Q Consensus 120 ~~~~~~v~~sP~~~~dg~-v~~Gs-~~--~~~~~vD~~tG~~~~~~ 161 (613)
. ...+..+|..+.||. +++.+ .. ..+|.+|+.+|+.....
T Consensus 287 ~--~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt 330 (435)
T PRK05137 287 D--SPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRIS 330 (435)
T ss_pred C--CCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEee
Confidence 3 333556788888885 55554 32 37999999888776543
No 493
>PTZ00421 coronin; Provisional
Probab=96.05 E-value=0.14 Score=57.03 Aligned_cols=151 Identities=17% Similarity=0.154 Sum_probs=88.0
Q ss_pred CCEEEEEecCCcEEEEeCCCCeeeEEeeC-CCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHHH-
Q 007199 48 PDVALVAALDGTIHLVDTKLGKIRWSFGT-GRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEY- 125 (613)
Q Consensus 48 ~~~v~v~t~dG~l~ald~~tG~~~W~~~~-~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~- 125 (613)
+++++.|+.||+|..-|..+|+.+=++.. ..+|.+- ....+ ..+++.++.||.+..+|.++|+. ...+....-
T Consensus 138 ~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sl---a~spd-G~lLatgs~Dg~IrIwD~rsg~~-v~tl~~H~~~ 212 (493)
T PTZ00421 138 MNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSL---EWNLD-GSLLCTTSKDKKLNIIDPRDGTI-VSSVEAHASA 212 (493)
T ss_pred CCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEE---EEECC-CCEEEEecCCCEEEEEECCCCcE-EEEEecCCCC
Confidence 46888899999999999999998777754 2345432 11122 24677788899999999999887 433332211
Q ss_pred hhhCceee-cCCcEEE-E---eecceEEEEECCCCcEEEE-EecCCCCCCCCCcCCCCCccccCCCcccccccccccccc
Q 007199 126 IRRMPYIS-KDGGVTL-G---AMKTSVFLVDVKSGRVVDN-YVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKR 199 (613)
Q Consensus 126 v~~sP~~~-~dg~v~~-G---s~~~~~~~vD~~tG~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (613)
........ .++.+++ | +.++.+..-|..+...... ...+.... ..++ ..++
T Consensus 213 ~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~----------~~~~------~~d~------- 269 (493)
T PTZ00421 213 KSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSA----------LFIP------FFDE------- 269 (493)
T ss_pred cceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCc----------eEEE------EEcC-------
Confidence 11111222 1233443 3 2467788888876543222 21111000 0000 1111
Q ss_pred cccEEEEEe-eeeEEEEEeCCCCceEEE
Q 007199 200 IRQLVYIMR-TDYVLQSTSQDSGEVLWN 226 (613)
Q Consensus 200 ~~~~v~igr-~d~~l~a~d~~~G~~~Wn 226 (613)
..+.+|+|. .|++|+.+|..+|+..-.
T Consensus 270 d~~~L~lggkgDg~Iriwdl~~~~~~~~ 297 (493)
T PTZ00421 270 DTNLLYIGSKGEGNIRCFELMNERLTFC 297 (493)
T ss_pred CCCEEEEEEeCCCeEEEEEeeCCceEEE
Confidence 133778876 499999999988875443
No 494
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=96.02 E-value=0.024 Score=60.77 Aligned_cols=141 Identities=13% Similarity=0.101 Sum_probs=0.0
Q ss_pred EEEecCCCCeEEEEecCCCceeeecccHHHHhhhCceeecCCc-EEEEeecceEEEEECCCCcEEEEEecCCCCCCCCCc
Q 007199 95 FYLDVDEDWELYFHSKRFGKMKKLSSSAEEYIRRMPYISKDGG-VTLGAMKTSVFLVDVKSGRVVDNYVLDFSASTPGFQ 173 (613)
Q Consensus 95 ~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~v~~sP~~~~dg~-v~~Gs~~~~~~~vD~~tG~~~~~~~~~~~~~~~~~~ 173 (613)
+|+.-..+|++..+|..+.+. .-.+.+..-++.+.+++.||+ +|+.++++.+..||+.|++++.+...+....+-.+.
T Consensus 8 ~~V~~~~~~~v~viD~~t~~~-~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~~~~i~~s 86 (369)
T PF02239_consen 8 FYVVERGSGSVAVIDGATNKV-VARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGNPRGIAVS 86 (369)
T ss_dssp EEEEEGGGTEEEEEETTT-SE-EEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSEEEEEEE-
T ss_pred EEEEecCCCEEEEEECCCCeE-EEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCCcceEEEc
Q ss_pred CCCCCccccCCCcccccccccccccccccEEEEEe-eeeEEEEEeCCCCceEEEEEeceeee--------eecccccCCC
Q 007199 174 SDENKHVVPVDGYEELVESGVGNLKRIRQLVYIMR-TDYVLQSTSQDSGEVLWNVAYADFKA--------EFRCQEVGKS 244 (613)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~igr-~d~~l~a~d~~~G~~~Wn~t~~~~~a--------~~~~~~~~~~ 244 (613)
.+++ .+|++. .+..+..+|.++.+++-++....+.- .....+....
T Consensus 87 ~DG~-------------------------~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~ 141 (369)
T PF02239_consen 87 PDGK-------------------------YVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPE 141 (369)
T ss_dssp -TTT-------------------------EEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSE
T ss_pred CCCC-------------------------EEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCE
Q ss_pred cccccccCCCccccccc
Q 007199 245 FSGYHFNSGSELGMDLI 261 (613)
Q Consensus 245 ~~~~~~~s~~~~~~~~~ 261 (613)
+-..-.++|.+|-+|++
T Consensus 142 fVv~lkd~~~I~vVdy~ 158 (369)
T PF02239_consen 142 FVVNLKDTGEIWVVDYS 158 (369)
T ss_dssp EEEEETTTTEEEEEETT
T ss_pred EEEEEccCCeEEEEEec
No 495
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=96.01 E-value=0.067 Score=59.93 Aligned_cols=142 Identities=15% Similarity=0.066 Sum_probs=101.2
Q ss_pred CCCEEEEEecCCcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCCeEEEEecCCCceeeecccHHHHh
Q 007199 47 EPDVALVAALDGTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDWELYFHSKRFGKMKKLSSSAEEYI 126 (613)
Q Consensus 47 ~~~~v~v~t~dG~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG~lY~~~~~~G~l~~~~~~~~~~v 126 (613)
+...+..|..||.|.--|..+|-=.=+|..-..-+...+.... ....+-.+.||++-++|.+.+.- --.|+.++.+
T Consensus 361 Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~---g~~llssSLDGtVRAwDlkRYrN-fRTft~P~p~ 436 (893)
T KOG0291|consen 361 DGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTAR---GNVLLSSSLDGTVRAWDLKRYRN-FRTFTSPEPI 436 (893)
T ss_pred CCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEec---CCEEEEeecCCeEEeeeecccce-eeeecCCCce
Confidence 5558999999999999999999988888654332222111111 24677888999999999988887 7789999999
Q ss_pred hhCceeecC--C-cEEEEeecc-eEEEEECCCCcEEEEEecCCCCCCCCCcCCCCCccccCCCccccccccccccccccc
Q 007199 127 RRMPYISKD--G-GVTLGAMKT-SVFLVDVKSGRVVDNYVLDFSASTPGFQSDENKHVVPVDGYEELVESGVGNLKRIRQ 202 (613)
Q Consensus 127 ~~sP~~~~d--g-~v~~Gs~~~-~~~~vD~~tG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (613)
+-+-+-. | | .|++|+.|. .+|..+.+||+++-..+.-.+.. . + -.++| ..+
T Consensus 437 Qfscvav-D~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPV----s-------~------l~f~~-------~~~ 491 (893)
T KOG0291|consen 437 QFSCVAV-DPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPV----S-------G------LSFSP-------DGS 491 (893)
T ss_pred eeeEEEE-cCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcc----e-------e------eEEcc-------ccC
Confidence 8864443 6 5 466788765 48999999999998776433211 0 0 01222 245
Q ss_pred EEEEEeeeeEEEEEe
Q 007199 203 LVYIMRTDYVLQSTS 217 (613)
Q Consensus 203 ~v~igr~d~~l~a~d 217 (613)
.++=|+||++|+.+|
T Consensus 492 ~LaS~SWDkTVRiW~ 506 (893)
T KOG0291|consen 492 LLASGSWDKTVRIWD 506 (893)
T ss_pred eEEeccccceEEEEE
Confidence 899999999999865
No 496
>PRK04922 tolB translocation protein TolB; Provisional
Probab=95.99 E-value=0.26 Score=54.08 Aligned_cols=111 Identities=16% Similarity=0.231 Sum_probs=66.7
Q ss_pred CCCCCEEEEEecC---CcEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCC--eEEEEecCCCceeeec
Q 007199 45 PPEPDVALVAALD---GTIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDW--ELYFHSKRFGKMKKLS 119 (613)
Q Consensus 45 ~~~~~~v~v~t~d---G~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG--~lY~~~~~~G~l~~~~ 119 (613)
++.+..+++.+.+ ..||.+|..+|+..--....+ +... .....++..+++..+.+| .||.+|..+|.++.+.
T Consensus 212 SpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g-~~~~--~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~~lt 288 (433)
T PRK04922 212 SPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRG-INGA--PSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLTRLT 288 (433)
T ss_pred CCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCC-CccC--ceECCCCCEEEEEEeCCCCceEEEEECCCCCeEECc
Confidence 3456666655543 369999999988754322222 2222 112233334544444455 6999999988874443
Q ss_pred ccHHHHhhhCceeecCCc-EEEEe-ecc--eEEEEECCCCcEEEE
Q 007199 120 SSAEEYIRRMPYISKDGG-VTLGA-MKT--SVFLVDVKSGRVVDN 160 (613)
Q Consensus 120 ~~~~~~v~~sP~~~~dg~-v~~Gs-~~~--~~~~vD~~tG~~~~~ 160 (613)
-...+..+|..+.||. +++.+ +.+ .+|.+|..+|+....
T Consensus 289 --~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~l 331 (433)
T PRK04922 289 --NHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERL 331 (433)
T ss_pred --cCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe
Confidence 2233556788888885 55555 333 599999999886543
No 497
>PRK04792 tolB translocation protein TolB; Provisional
Probab=95.98 E-value=0.26 Score=54.31 Aligned_cols=111 Identities=15% Similarity=0.184 Sum_probs=65.8
Q ss_pred CCCCCEEEEE-ecCC--cEEEEeCCCCeeeEEeeCCCceeeccccccCCCCCeEEEecCCCC--eEEEEecCCCceeeec
Q 007199 45 PPEPDVALVA-ALDG--TIHLVDTKLGKIRWSFGTGRPIYSSYQASFNSNASEFYLDVDEDW--ELYFHSKRFGKMKKLS 119 (613)
Q Consensus 45 ~~~~~~v~v~-t~dG--~l~ald~~tG~~~W~~~~~~~i~s~~~~~~~~~~~~~~i~~~~DG--~lY~~~~~~G~l~~~~ 119 (613)
++.+..+++. ..+| .||.+|..+|+..--....+.. .. .....++..+++..+.|| .||.+|..+|+.+++.
T Consensus 226 SPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~-~~--~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt 302 (448)
T PRK04792 226 SPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGIN-GA--PRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRIT 302 (448)
T ss_pred CCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCc-CC--eeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECc
Confidence 3455555544 4444 5999999998864322111111 11 112233334555555566 4999999988875554
Q ss_pred ccHHHHhhhCceeecCCc-EEEEe-e--cceEEEEECCCCcEEEE
Q 007199 120 SSAEEYIRRMPYISKDGG-VTLGA-M--KTSVFLVDVKSGRVVDN 160 (613)
Q Consensus 120 ~~~~~~v~~sP~~~~dg~-v~~Gs-~--~~~~~~vD~~tG~~~~~ 160 (613)
. ......+|..+.||. +++.+ + ...+|.+|+.+|+...-
T Consensus 303 ~--~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~L 345 (448)
T PRK04792 303 R--HRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRL 345 (448)
T ss_pred c--CCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEE
Confidence 3 334556788887874 44433 2 24699999999987643
No 498
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=95.97 E-value=0.05 Score=54.20 Aligned_cols=70 Identities=11% Similarity=0.014 Sum_probs=52.7
Q ss_pred eeEeecCceEEEEEEeeCCcEEEEEEeecc-chHHHHHHHHHHHhcCCC-CcceeEEEEEEeCCEEEEEecCCCc
Q 007199 479 KEIAKGSNGTVVLEGNYEGRSVAVKRLVKT-HHDVALKEIQNLIASDQH-PNIVRWYGVESDQDFVYLSLERCTC 551 (613)
Q Consensus 479 ~~LG~G~fG~Vyk~~~~~g~~VAVK~l~~~-~~~~~~~Ei~~L~~l~~H-pnIV~l~g~~~~~~~~~LV~E~~~G 551 (613)
..||+|..+.||+. .|..+++|..... ......+|.+++..+-.. -.+.+.+.+....+...+|||+++|
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 57899999999983 2556778887753 345678899888776222 2356778888778888899999998
No 499
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=95.93 E-value=0.037 Score=60.18 Aligned_cols=107 Identities=15% Similarity=0.068 Sum_probs=72.3
Q ss_pred ceEEEEE-EeeCCcEEEEEEeec---cchHHHHHHHHHHHhcCCCCcceeEEEEEEe----CCEEEEEecCCC--ccHHH
Q 007199 486 NGTVVLE-GNYEGRSVAVKRLVK---THHDVALKEIQNLIASDQHPNIVRWYGVESD----QDFVYLSLERCT--CSLND 555 (613)
Q Consensus 486 fG~Vyk~-~~~~g~~VAVK~l~~---~~~~~~~~Ei~~L~~l~~HpnIV~l~g~~~~----~~~~~LV~E~~~--GsL~~ 555 (613)
-.+.||+ ...+|..+++||+.. ........-++.++++ .|+|+|++.++|.. +..++|||+|.+ ++|.+
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl-~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d 367 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKL-CHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYD 367 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHh-ccCceeehhhhhhhhccCcceEEEEEecCCCCchHHH
Confidence 3467887 588999999999932 2222233345567777 99999999999884 337899999999 48988
Q ss_pred HHHHhcCC---------CccccCCHHHHHHHHH---HHHHHHhcCCceee
Q 007199 556 LIYVLSGS---------FEEQLNAKEQDSNLLN---EVRIRLLPVMENTK 593 (613)
Q Consensus 556 ~L~~~~~~---------~~~~~~~~~~~~~~~~---~~l~~Lh~~~iiHr 593 (613)
+--..... ......++..+..++. .+|.+||+.+.--+
T Consensus 368 ~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck 417 (655)
T KOG3741|consen 368 LYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACK 417 (655)
T ss_pred HHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceee
Confidence 75432211 1233344555444444 89999999887543
No 500
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=95.90 E-value=0.01 Score=64.98 Aligned_cols=80 Identities=18% Similarity=0.008 Sum_probs=58.6
Q ss_pred CCCCcceeEEEEEEeCCEEEEEecCCC-ccHHHHHHHhcCCCccccCCHHHHHHHHH-----HHHHHHhcCCc-eeeccc
Q 007199 524 DQHPNIVRWYGVESDQDFVYLSLERCT-CSLNDLIYVLSGSFEEQLNAKEQDSNLLN-----EVRIRLLPVME-NTKDIE 596 (613)
Q Consensus 524 ~~HpnIV~l~g~~~~~~~~~LV~E~~~-GsL~~~L~~~~~~~~~~~~~~~~~~~~~~-----~~l~~Lh~~~i-iHrDlK 596 (613)
+.|.|+.+++|.+.+....++|.+||. |+|.|.+... .+.+++...... .||.|+|.-.| +|.-++
T Consensus 4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~-------~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~ 76 (484)
T KOG1023|consen 4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE-------DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALK 76 (484)
T ss_pred cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc-------ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeec
Confidence 389999999999999999999999999 9999999752 334444444433 89999999877 677666
Q ss_pred eecCCCcCcceeeec
Q 007199 597 LWKANGHPSAQLLKV 611 (613)
Q Consensus 597 llh~dg~PsniLlkl 611 (613)
-. .++.-++.+|||
T Consensus 77 s~-nClvd~~w~lkl 90 (484)
T KOG1023|consen 77 SS-NCLVDSRWVLKL 90 (484)
T ss_pred cc-cceeeeeEEEEe
Confidence 32 223333444443
Done!