Query 007200
Match_columns 613
No_of_seqs 577 out of 4846
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 19:43:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007200.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007200hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 8E-55 2.7E-59 439.3 15.2 259 288-567 26-304 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 9.4E-55 3.2E-59 436.9 12.8 257 288-566 13-286 (299)
3 3omv_A RAF proto-oncogene seri 100.0 1.2E-53 3.9E-58 429.0 17.5 261 284-566 32-297 (307)
4 4aoj_A High affinity nerve gro 100.0 7E-54 2.4E-58 436.5 16.0 258 288-567 41-317 (329)
5 4b9d_A Serine/threonine-protei 100.0 2.3E-53 7.9E-58 432.7 14.2 251 288-562 24-276 (350)
6 3uim_A Brassinosteroid insensi 100.0 2.6E-52 8.8E-57 428.5 21.9 325 260-584 2-326 (326)
7 4fih_A Serine/threonine-protei 100.0 2.1E-52 7.1E-57 425.0 20.5 249 288-562 74-323 (346)
8 4ase_A Vascular endothelial gr 100.0 6.1E-53 2.1E-57 433.0 12.6 269 278-566 54-344 (353)
9 4g3f_A NF-kappa-beta-inducing 100.0 2.2E-52 7.6E-57 423.6 15.7 250 288-566 58-313 (336)
10 3fpq_A Serine/threonine-protei 100.0 3.1E-52 1.1E-56 415.5 16.5 245 291-562 29-282 (290)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.2E-52 1.5E-56 416.5 16.3 248 288-561 32-283 (311)
12 4fie_A Serine/threonine-protei 100.0 7.4E-51 2.5E-55 423.7 23.5 249 288-562 151-400 (423)
13 3hmm_A TGF-beta receptor type- 100.0 2E-51 7E-56 415.3 18.5 267 288-566 3-294 (303)
14 3hyh_A Carbon catabolite-derep 100.0 1.6E-50 5.4E-55 399.7 22.2 246 288-562 13-262 (275)
15 3ubd_A Ribosomal protein S6 ki 100.0 6.9E-51 2.4E-55 407.8 13.3 243 288-557 24-271 (304)
16 4g31_A Eukaryotic translation 100.0 1.7E-50 5.8E-55 406.7 15.2 251 288-562 5-279 (299)
17 4b99_A Mitogen-activated prote 100.0 6.6E-47 2.3E-51 394.9 20.5 262 288-562 54-344 (398)
18 4f9c_A Cell division cycle 7-r 100.0 2.2E-46 7.4E-51 386.9 19.7 196 286-494 19-248 (361)
19 2qkw_B Protein kinase; three-h 100.0 1.1E-45 3.8E-50 378.3 23.4 278 283-566 34-312 (321)
20 3v5w_A G-protein coupled recep 100.0 2.8E-45 9.6E-50 398.4 18.9 250 287-562 188-449 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 4E-45 1.4E-49 400.0 19.5 252 287-562 156-410 (573)
22 3fxz_A Serine/threonine-protei 100.0 8.1E-43 2.8E-47 352.8 24.9 250 287-562 19-269 (297)
23 2psq_A Fibroblast growth facto 100.0 9.2E-44 3.2E-48 370.9 18.2 260 287-567 80-362 (370)
24 3zgw_A Maternal embryonic leuc 100.0 2E-43 6.8E-48 364.1 20.4 251 286-562 8-260 (347)
25 3s95_A LIMK-1, LIM domain kina 100.0 1E-42 3.4E-47 354.5 22.9 257 287-567 9-280 (310)
26 3p86_A Serine/threonine-protei 100.0 4.2E-44 1.4E-48 364.2 12.2 265 279-566 28-295 (309)
27 2nru_A Interleukin-1 receptor- 100.0 4.3E-42 1.5E-46 349.2 26.8 283 274-567 11-304 (307)
28 3kul_A Ephrin type-A receptor 100.0 1.3E-43 4.5E-48 363.3 15.7 257 287-567 48-311 (325)
29 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.9E-43 9.9E-48 350.6 16.3 256 286-567 6-262 (268)
30 4euu_A Serine/threonine-protei 100.0 4.2E-42 1.4E-46 351.3 25.2 272 287-568 8-308 (319)
31 3cbl_A C-FES, proto-oncogene t 100.0 6.4E-44 2.2E-48 373.3 11.7 260 284-567 110-372 (377)
32 3fe3_A MAP/microtubule affinit 100.0 1.7E-42 5.7E-47 355.0 21.8 248 287-562 14-264 (328)
33 4hcu_A Tyrosine-protein kinase 100.0 1.9E-43 6.3E-48 352.3 14.1 255 286-566 8-263 (269)
34 2qol_A Ephrin receptor; recept 100.0 2.2E-43 7.5E-48 368.3 14.6 257 287-567 44-307 (373)
35 4eqm_A Protein kinase; transfe 100.0 6.8E-43 2.3E-47 352.9 17.1 260 287-567 10-273 (294)
36 2c30_A Serine/threonine-protei 100.0 8.4E-42 2.9E-46 349.3 24.8 262 276-563 23-295 (321)
37 3vhe_A Vascular endothelial gr 100.0 1.6E-43 5.5E-48 368.0 12.1 269 278-566 12-352 (359)
38 3tki_A Serine/threonine-protei 100.0 7.1E-43 2.4E-47 357.5 16.6 253 288-563 7-262 (323)
39 1opk_A P150, C-ABL, proto-onco 100.0 7.9E-43 2.7E-47 377.7 16.6 261 284-569 216-478 (495)
40 1mp8_A Focal adhesion kinase 1 100.0 3E-43 1E-47 353.1 12.2 257 285-566 12-273 (281)
41 2ivs_A Proto-oncogene tyrosine 100.0 3.8E-43 1.3E-47 358.1 13.0 262 284-566 19-308 (314)
42 3l9p_A Anaplastic lymphoma kin 100.0 3.9E-43 1.3E-47 365.9 13.3 259 287-566 70-342 (367)
43 3gen_A Tyrosine-protein kinase 100.0 6.2E-43 2.1E-47 351.1 14.2 256 285-566 21-277 (283)
44 3niz_A Rhodanese family protei 100.0 4.4E-42 1.5E-46 349.8 20.6 263 287-562 20-300 (311)
45 3tt0_A Basic fibroblast growth 100.0 1.1E-42 3.7E-47 364.7 16.3 261 286-567 67-350 (382)
46 1luf_A Muscle-specific tyrosin 100.0 4.2E-43 1.4E-47 362.4 13.0 265 282-567 41-333 (343)
47 4dc2_A Protein kinase C IOTA t 100.0 6.3E-42 2.2E-46 358.3 21.6 274 286-577 50-331 (396)
48 1qcf_A Haematopoetic cell kina 100.0 2E-43 6.7E-48 378.7 10.3 260 282-567 182-442 (454)
49 3soc_A Activin receptor type-2 100.0 1.8E-42 6E-47 354.6 16.7 269 286-567 22-316 (322)
50 2yab_A Death-associated protei 100.0 3.1E-42 1E-46 357.4 18.6 252 287-562 11-272 (361)
51 3q4u_A Activin receptor type-1 100.0 3.4E-42 1.2E-46 348.8 18.3 260 287-567 7-300 (301)
52 1o6l_A RAC-beta serine/threoni 100.0 1.4E-41 4.7E-46 349.2 23.1 250 287-563 4-261 (337)
53 3poz_A Epidermal growth factor 100.0 9E-43 3.1E-47 357.6 14.0 256 287-567 14-276 (327)
54 3qd2_B Eukaryotic translation 100.0 3.3E-42 1.1E-46 353.8 17.9 252 287-562 5-325 (332)
55 3v8s_A RHO-associated protein 100.0 6.2E-42 2.1E-46 360.3 20.1 261 280-563 61-330 (410)
56 2zv2_A Calcium/calmodulin-depe 100.0 3.4E-42 1.2E-46 348.5 17.4 250 287-562 12-292 (298)
57 2pmi_A Negative RE, cyclin-dep 100.0 9.1E-42 3.1E-46 348.5 20.6 266 287-562 4-293 (317)
58 3c0i_A Peripheral plasma membr 100.0 2.2E-42 7.5E-47 358.1 16.1 256 287-562 23-286 (351)
59 3kfa_A Tyrosine-protein kinase 100.0 6.5E-43 2.2E-47 351.9 11.8 260 283-567 8-269 (288)
60 1t46_A HOMO sapiens V-KIT hard 100.0 1.1E-42 3.8E-47 354.4 13.0 263 284-566 19-304 (313)
61 3kex_A Receptor tyrosine-prote 100.0 5.7E-43 2E-47 358.7 10.9 256 288-568 13-275 (325)
62 1rjb_A FL cytokine receptor; k 100.0 1.1E-42 3.8E-47 359.5 13.1 265 283-567 40-332 (344)
63 1tki_A Titin; serine kinase, m 100.0 3.9E-42 1.3E-46 351.6 16.8 251 287-562 4-257 (321)
64 3a8x_A Protein kinase C IOTA t 100.0 8.9E-42 3.1E-46 352.2 19.5 253 287-557 8-264 (345)
65 2i1m_A Macrophage colony-stimu 100.0 8.6E-43 2.9E-47 358.7 11.1 265 282-566 40-323 (333)
66 1ob3_A PFPK5, cell division co 100.0 1.1E-41 3.7E-46 343.1 18.9 262 288-562 2-280 (288)
67 2y0a_A Death-associated protei 100.0 3.4E-41 1.2E-45 345.6 22.9 253 287-563 10-272 (326)
68 3dtc_A Mitogen-activated prote 100.0 3.2E-42 1.1E-46 343.6 14.8 254 287-566 6-270 (271)
69 3txo_A PKC-L, NPKC-ETA, protei 100.0 7.3E-42 2.5E-46 353.6 18.0 251 285-562 20-280 (353)
70 3soa_A Calcium/calmodulin-depe 100.0 1.9E-41 6.6E-46 360.6 21.7 255 286-563 9-268 (444)
71 3lb7_A RAF proto-oncogene seri 100.0 4.7E-41 1.6E-45 341.5 23.5 260 285-566 33-297 (307)
72 3ugc_A Tyrosine-protein kinase 100.0 1.9E-42 6.6E-47 349.7 13.1 265 286-566 8-288 (295)
73 4fr4_A YANK1, serine/threonine 100.0 5.5E-41 1.9E-45 350.0 24.3 251 287-562 14-271 (384)
74 1k9a_A Carboxyl-terminal SRC k 100.0 6.6E-42 2.3E-46 366.3 17.8 251 285-566 190-442 (450)
75 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2E-42 6.8E-47 370.5 13.7 257 285-567 181-438 (452)
76 3o0g_A Cell division protein k 100.0 3E-41 1E-45 340.5 21.0 263 288-562 2-282 (292)
77 4aw2_A Serine/threonine-protei 100.0 1.2E-42 4E-47 368.6 11.0 265 279-563 65-339 (437)
78 4f0f_A Serine/threonine-protei 100.0 1.6E-41 5.6E-46 341.5 18.7 253 287-566 18-286 (287)
79 1qpc_A LCK kinase; alpha beta 100.0 1.9E-42 6.6E-47 346.8 11.8 258 283-566 8-266 (279)
80 1fot_A TPK1 delta, CAMP-depend 100.0 5.9E-41 2E-45 342.0 22.9 246 287-562 5-258 (318)
81 3t9t_A Tyrosine-protein kinase 100.0 3.2E-42 1.1E-46 342.7 13.2 255 286-566 6-261 (267)
82 3lxp_A Non-receptor tyrosine-p 100.0 3.5E-42 1.2E-46 351.8 13.8 260 290-566 33-307 (318)
83 2pvf_A Fibroblast growth facto 100.0 8E-42 2.7E-46 351.6 16.5 262 285-567 32-316 (334)
84 3cc6_A Protein tyrosine kinase 100.0 5.7E-42 2E-46 343.8 14.9 257 286-567 10-271 (281)
85 2bdw_A Hypothetical protein K1 100.0 3.3E-41 1.1E-45 350.5 21.0 254 286-563 27-285 (362)
86 3qup_A Tyrosine-protein kinase 100.0 1.4E-42 4.9E-47 355.4 10.3 263 284-567 19-296 (323)
87 3ork_A Serine/threonine protei 100.0 1.5E-41 5E-46 346.1 17.5 254 287-562 11-273 (311)
88 3h4j_B AMPK kdaid, SNF1-like p 100.0 9.4E-42 3.2E-46 350.2 16.2 246 288-562 9-258 (336)
89 3is5_A Calcium-dependent prote 100.0 4.8E-41 1.6E-45 337.8 20.7 254 287-562 21-278 (285)
90 1p4o_A Insulin-like growth fac 100.0 3.9E-42 1.3E-46 352.0 12.8 269 278-567 15-297 (322)
91 2xir_A Vascular endothelial gr 100.0 4.4E-42 1.5E-46 350.5 12.9 270 278-567 17-308 (316)
92 2izr_A Casein kinase I isoform 100.0 6E-41 2.1E-45 344.5 21.4 259 287-567 8-279 (330)
93 3op5_A Serine/threonine-protei 100.0 2.1E-41 7.3E-46 352.7 18.0 266 286-566 33-326 (364)
94 2vd5_A DMPK protein; serine/th 100.0 5.8E-42 2E-46 360.8 13.7 263 279-562 52-327 (412)
95 3kmu_A ILK, integrin-linked ki 100.0 8E-42 2.7E-46 340.4 14.0 252 287-567 9-268 (271)
96 1u59_A Tyrosine-protein kinase 100.0 1.6E-41 5.4E-46 341.7 16.1 255 287-566 8-269 (287)
97 1rdq_E PKA C-alpha, CAMP-depen 100.0 9.7E-41 3.3E-45 345.0 22.3 245 288-562 41-293 (350)
98 4e5w_A Tyrosine-protein kinase 100.0 1.5E-41 5.3E-46 344.2 16.0 265 287-566 20-299 (302)
99 3gni_B Strad alpha; kinase fol 100.0 4.4E-41 1.5E-45 353.6 20.1 268 287-563 24-334 (389)
100 3lzb_A Epidermal growth factor 100.0 9.7E-42 3.3E-46 349.8 14.6 256 287-567 14-276 (327)
101 1xjd_A Protein kinase C, theta 100.0 2.8E-41 9.7E-46 347.9 18.1 251 284-561 13-268 (345)
102 3mtl_A Cell division protein k 100.0 1.1E-41 3.8E-46 348.9 14.8 262 288-562 2-281 (324)
103 1kob_A Twitchin; kinase, intra 100.0 6.5E-41 2.2E-45 350.5 20.9 253 287-563 50-305 (387)
104 4eut_A Serine/threonine-protei 100.0 4.8E-41 1.6E-45 353.9 20.0 271 287-567 8-307 (396)
105 1csn_A Casein kinase-1; phosph 100.0 1E-40 3.6E-45 337.4 21.6 259 287-566 9-280 (298)
106 3p1a_A MYT1 kinase, membrane-a 100.0 2.4E-41 8.1E-46 344.5 16.8 247 286-562 55-304 (311)
107 1mqb_A Ephrin type-A receptor 100.0 2.2E-41 7.6E-46 348.1 16.3 257 287-567 43-307 (333)
108 2yex_A Serine/threonine-protei 100.0 5.2E-41 1.8E-45 335.7 18.5 253 287-562 6-261 (276)
109 2h34_A Serine/threonine-protei 100.0 2E-40 6.8E-45 337.4 22.8 259 287-568 33-295 (309)
110 3a62_A Ribosomal protein S6 ki 100.0 1.3E-40 4.4E-45 341.4 21.2 249 287-562 16-276 (327)
111 3llt_A Serine/threonine kinase 100.0 3E-41 1E-45 351.1 16.6 209 274-494 21-260 (360)
112 3uc3_A Serine/threonine-protei 100.0 1E-40 3.5E-45 346.7 20.5 253 287-563 19-275 (361)
113 3dbq_A Dual specificity protei 100.0 2.1E-41 7.2E-46 349.7 15.3 252 287-563 8-274 (343)
114 3hko_A Calcium/calmodulin-depe 100.0 1.1E-40 3.8E-45 344.6 20.6 261 284-562 22-330 (345)
115 3kn6_A Ribosomal protein S6 ki 100.0 7.3E-41 2.5E-45 342.9 18.9 250 293-562 16-270 (325)
116 2h8h_A Proto-oncogene tyrosine 100.0 2.9E-42 1E-46 376.6 8.6 260 282-567 261-521 (535)
117 4ejn_A RAC-alpha serine/threon 100.0 9.1E-41 3.1E-45 357.4 20.0 249 287-562 147-404 (446)
118 3g33_A Cell division protein k 100.0 7.2E-41 2.5E-45 340.4 18.1 265 285-562 6-296 (308)
119 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-40 5.1E-45 344.0 20.8 252 286-563 51-306 (349)
120 3c1x_A Hepatocyte growth facto 100.0 1.5E-41 5.3E-46 354.1 13.4 254 289-566 90-352 (373)
121 1xbb_A Tyrosine-protein kinase 100.0 1.6E-41 5.6E-46 342.3 13.0 256 285-566 13-276 (291)
122 2wqm_A Serine/threonine-protei 100.0 1.5E-40 5.2E-45 338.3 20.2 261 287-566 31-294 (310)
123 4agu_A Cyclin-dependent kinase 100.0 1E-40 3.5E-45 339.7 18.9 262 288-562 3-284 (311)
124 3og7_A AKAP9-BRAF fusion prote 100.0 1.6E-40 5.5E-45 334.7 20.2 262 285-568 21-287 (289)
125 2ozo_A Tyrosine-protein kinase 100.0 2.8E-41 9.5E-46 374.1 16.0 253 289-566 336-595 (613)
126 2i0e_A Protein kinase C-beta I 100.0 6.3E-41 2.2E-45 346.4 17.6 251 285-562 17-276 (353)
127 3a7i_A MST3 kinase, serine/thr 100.0 6.3E-41 2.1E-45 340.0 17.2 249 288-563 22-271 (303)
128 3fdn_A Serine/threonine-protei 100.0 1.9E-40 6.4E-45 332.4 20.4 248 286-562 7-257 (279)
129 3oz6_A Mitogen-activated prote 100.0 1.1E-40 3.9E-45 350.3 19.7 265 285-563 6-329 (388)
130 1fvr_A Tyrosine-protein kinase 100.0 2.6E-41 8.7E-46 346.8 14.2 257 287-566 24-297 (327)
131 3mdy_A Bone morphogenetic prot 100.0 3.7E-40 1.3E-44 339.4 23.0 269 280-566 29-328 (337)
132 2eue_A Carbon catabolite derep 100.0 2.7E-40 9.3E-45 330.5 21.3 246 288-562 13-262 (275)
133 3pls_A Macrophage-stimulating 100.0 5.1E-41 1.7E-45 339.7 16.1 255 289-566 22-284 (298)
134 2zmd_A Dual specificity protei 100.0 4E-41 1.4E-45 353.4 15.7 252 287-563 55-321 (390)
135 2buj_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45 343.3 15.7 264 285-568 26-305 (317)
136 3kk8_A Calcium/calmodulin depe 100.0 4.1E-40 1.4E-44 330.6 22.4 252 287-562 5-261 (284)
137 2qr7_A Ribosomal protein S6 ki 100.0 7E-41 2.4E-45 345.1 17.1 252 286-562 20-277 (342)
138 2w5a_A Serine/threonine-protei 100.0 8.6E-42 2.9E-46 342.0 10.0 257 287-565 5-270 (279)
139 1u5q_A Serine/threonine protei 100.0 4E-41 1.4E-45 347.8 15.2 247 288-563 54-306 (348)
140 2v62_A Serine/threonine-protei 100.0 4.6E-41 1.6E-45 347.5 15.5 267 287-569 36-328 (345)
141 3f66_A Hepatocyte growth facto 100.0 4.5E-41 1.6E-45 340.2 15.2 255 288-566 25-288 (298)
142 2a2a_A Death-associated protei 100.0 1E-40 3.4E-45 341.4 17.8 253 287-563 11-273 (321)
143 3cok_A Serine/threonine-protei 100.0 1.2E-40 4E-45 333.6 17.6 249 288-562 11-262 (278)
144 3gxj_A TGF-beta receptor type- 100.0 3.6E-42 1.2E-46 348.9 6.6 262 287-569 2-297 (303)
145 3dls_A PAS domain-containing s 100.0 5.5E-41 1.9E-45 345.2 15.2 244 286-563 22-275 (335)
146 2y94_A 5'-AMP-activated protei 100.0 3.6E-40 1.2E-44 353.1 22.0 247 288-562 16-266 (476)
147 2x4f_A Myosin light chain kina 100.0 3E-40 1E-44 344.4 20.9 246 293-562 94-342 (373)
148 3f3z_A Calcium/calmodulin-depe 100.0 1.7E-40 5.7E-45 332.3 18.0 250 287-562 8-261 (277)
149 2r5t_A Serine/threonine-protei 100.0 2E-40 6.8E-45 345.1 19.0 264 287-577 37-306 (373)
150 3lxl_A Tyrosine-protein kinase 100.0 1.6E-41 5.5E-46 348.3 10.6 265 287-567 22-301 (327)
151 2eva_A TAK1 kinase - TAB1 chim 100.0 6E-41 2E-45 340.8 14.7 254 287-567 7-261 (307)
152 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.2E-40 1.8E-44 355.8 22.9 253 287-558 184-439 (543)
153 3g2f_A Bone morphogenetic prot 100.0 2.3E-41 7.8E-46 348.4 11.7 269 286-566 11-315 (336)
154 2yfx_A Tyrosine-protein kinase 100.0 6.2E-41 2.1E-45 343.9 14.8 260 286-566 28-301 (327)
155 4hgt_A Casein kinase I isoform 100.0 8.3E-40 2.8E-44 330.3 22.7 260 286-566 7-277 (296)
156 1nxk_A MAP kinase-activated pr 100.0 2.9E-40 1E-44 347.9 19.8 252 288-563 61-322 (400)
157 3brb_A Proto-oncogene tyrosine 100.0 4.4E-41 1.5E-45 342.8 13.0 265 281-566 27-305 (313)
158 4fvq_A Tyrosine-protein kinase 100.0 1.7E-40 5.7E-45 334.4 17.1 251 287-568 7-274 (289)
159 1x8b_A WEE1HU, WEE1-like prote 100.0 8.6E-41 2.9E-45 336.0 14.4 247 287-562 10-279 (289)
160 2ac3_A MAP kinase-interacting 100.0 1.6E-40 5.6E-45 339.0 16.6 261 288-562 12-295 (316)
161 2acx_A G protein-coupled recep 100.0 2.3E-40 7.8E-45 359.4 18.7 255 286-562 182-444 (576)
162 1vzo_A Ribosomal protein S6 ki 100.0 1.8E-40 6.3E-45 344.2 17.2 256 287-564 53-323 (355)
163 1b6c_B TGF-B superfamily recep 100.0 5.7E-40 1.9E-44 338.8 20.7 269 278-567 32-334 (342)
164 3eqc_A Dual specificity mitoge 100.0 2.9E-40 9.8E-45 343.7 18.6 200 287-495 32-232 (360)
165 3uzp_A CKI-delta, CKID, casein 100.0 1.1E-39 3.8E-44 329.5 21.9 259 287-566 8-277 (296)
166 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.2E-40 7.7E-45 340.0 16.7 264 285-562 31-318 (329)
167 3ttj_A Mitogen-activated prote 100.0 5.4E-40 1.8E-44 352.1 20.1 260 287-563 61-356 (464)
168 1byg_A CSK, protein (C-termina 100.0 6.5E-41 2.2E-45 335.5 12.2 251 286-567 19-271 (278)
169 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.5E-40 2.6E-44 341.1 20.6 252 285-566 62-336 (365)
170 2rku_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44 329.3 20.9 249 287-562 14-265 (294)
171 3lm5_A Serine/threonine-protei 100.0 9.3E-40 3.2E-44 335.1 20.6 260 281-562 21-287 (327)
172 4aaa_A Cyclin-dependent kinase 100.0 2E-40 6.7E-45 340.8 15.6 262 288-562 25-306 (331)
173 3pg1_A Mitogen-activated prote 100.0 4.5E-40 1.5E-44 342.5 18.5 270 279-562 13-316 (362)
174 2a19_B Interferon-induced, dou 100.0 7.5E-40 2.6E-44 328.6 19.4 247 286-567 9-272 (284)
175 1ua2_A CAK, cell division prot 100.0 5.3E-40 1.8E-44 339.7 18.7 265 286-563 8-292 (346)
176 3bhy_A Death-associated protei 100.0 1.3E-39 4.5E-44 326.8 21.0 252 287-562 4-265 (283)
177 2vwi_A Serine/threonine-protei 100.0 1.9E-40 6.5E-45 336.2 14.9 265 283-562 10-287 (303)
178 2w1i_A JAK2; chromosomal rearr 100.0 3.6E-40 1.2E-44 338.1 17.1 264 287-566 40-319 (326)
179 1cm8_A Phosphorylated MAP kina 100.0 7.6E-40 2.6E-44 340.9 19.7 257 287-562 24-307 (367)
180 3i6u_A CDS1, serine/threonine- 100.0 4.5E-40 1.6E-44 348.7 18.2 254 285-562 132-399 (419)
181 2vgo_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 326.9 20.9 247 287-562 13-262 (284)
182 4fl3_A Tyrosine-protein kinase 100.0 2E-40 6.8E-45 368.2 16.0 247 294-566 375-628 (635)
183 2owb_A Serine/threonine-protei 100.0 9.7E-40 3.3E-44 336.2 20.0 249 287-562 40-291 (335)
184 3fme_A Dual specificity mitoge 100.0 1.3E-40 4.6E-45 335.2 13.2 256 286-562 5-266 (290)
185 3nsz_A CK II alpha, casein kin 100.0 1.3E-39 4.4E-44 334.5 20.5 255 288-562 36-319 (330)
186 1t4h_A Serine/threonine-protei 100.0 4.8E-40 1.7E-44 331.3 16.8 248 288-562 26-282 (290)
187 1u46_A ACK-1, activated CDC42 100.0 8.8E-41 3E-45 336.7 11.3 258 287-568 17-283 (291)
188 2clq_A Mitogen-activated prote 100.0 1.2E-39 4E-44 329.2 19.4 253 288-562 22-278 (295)
189 3an0_A Dual specificity mitoge 100.0 1.5E-40 5.1E-45 343.0 13.0 257 285-562 48-310 (340)
190 3eb0_A Putative uncharacterize 100.0 5.5E-40 1.9E-44 344.4 17.2 263 284-562 3-321 (383)
191 3byv_A Rhoptry kinase; malaria 100.0 5.8E-41 2E-45 351.1 9.6 244 287-562 72-359 (377)
192 2jii_A Serine/threonine-protei 100.0 2.1E-40 7E-45 343.6 13.5 260 287-566 41-333 (352)
193 3rp9_A Mitogen-activated prote 100.0 1.9E-39 6.6E-44 348.5 21.5 194 288-489 53-280 (458)
194 3com_A Serine/threonine-protei 100.0 5.4E-39 1.9E-43 327.4 23.7 251 286-562 27-278 (314)
195 2y7j_A Phosphorylase B kinase 100.0 5.4E-39 1.8E-43 334.4 24.0 257 282-562 88-359 (365)
196 3qyz_A Mitogen-activated prote 100.0 2.9E-39 9.9E-44 336.6 21.7 262 287-562 26-313 (364)
197 2jam_A Calcium/calmodulin-depe 100.0 1.4E-39 4.8E-44 330.3 18.6 250 287-562 8-261 (304)
198 3mi9_A Cell division protein k 100.0 1.7E-39 5.8E-44 336.6 19.5 263 288-562 17-311 (351)
199 3q60_A ROP5B; pseudokinase, tr 100.0 2E-40 7E-45 346.2 12.5 254 288-562 62-352 (371)
200 2j7t_A Serine/threonine-protei 100.0 1.4E-39 4.9E-44 329.8 18.3 252 287-562 18-275 (302)
201 2x7f_A TRAF2 and NCK-interacti 100.0 1.4E-40 4.9E-45 341.0 11.1 256 282-562 18-286 (326)
202 3n9x_A Phosphotransferase; mal 100.0 3.4E-39 1.2E-43 343.6 22.0 200 287-494 25-253 (432)
203 3mwu_A Calmodulin-domain prote 100.0 3.9E-39 1.3E-43 348.6 22.8 252 287-563 21-277 (486)
204 3q5i_A Protein kinase; CDPK, m 100.0 5.7E-39 1.9E-43 348.8 23.8 251 287-562 35-301 (504)
205 2h6d_A 5'-AMP-activated protei 100.0 3.3E-39 1.1E-43 322.7 20.2 249 286-562 9-261 (276)
206 3ll6_A Cyclin G-associated kin 100.0 3.3E-40 1.1E-44 339.6 13.3 255 286-567 26-306 (337)
207 2r3i_A Cell division protein k 100.0 2.3E-39 7.9E-44 327.7 19.1 263 288-562 3-283 (299)
208 3lij_A Calcium/calmodulin depe 100.0 4.2E-39 1.4E-43 349.0 22.3 251 287-562 36-291 (494)
209 2j0j_A Focal adhesion kinase 1 100.0 2.4E-40 8.1E-45 368.9 12.7 260 282-566 384-648 (656)
210 3nyv_A Calmodulin-domain prote 100.0 2E-39 7E-44 350.8 19.6 252 286-562 24-281 (484)
211 3sv0_A Casein kinase I-like; t 100.0 1.1E-38 3.9E-43 342.0 24.7 260 287-567 6-276 (483)
212 2pml_X PFPK7, Ser/Thr protein 100.0 8.9E-40 3E-44 338.3 15.1 259 287-562 30-322 (348)
213 2ycf_A Serine/threonine-protei 100.0 2.5E-39 8.6E-44 331.2 17.8 254 286-563 8-275 (322)
214 1wak_A Serine/threonine-protei 100.0 4.2E-39 1.4E-43 339.3 20.0 265 287-562 36-391 (397)
215 3kvw_A DYRK2, dual specificity 100.0 1.7E-39 5.9E-44 345.2 17.1 196 287-494 96-300 (429)
216 2fst_X Mitogen-activated prote 100.0 3.6E-39 1.2E-43 335.6 18.8 259 287-563 28-312 (367)
217 3pfq_A PKC-B, PKC-beta, protei 100.0 4.8E-39 1.6E-43 359.5 21.2 252 284-562 337-597 (674)
218 2wtk_C Serine/threonine-protei 100.0 2.9E-38 1E-42 320.6 24.8 251 287-562 4-263 (305)
219 2xrw_A Mitogen-activated prote 100.0 6.5E-39 2.2E-43 334.7 20.4 256 287-562 24-318 (371)
220 2b9h_A MAP kinase FUS3, mitoge 100.0 2.7E-39 9.2E-44 335.3 17.4 262 287-562 10-305 (353)
221 1j1b_A Glycogen synthase kinas 100.0 1.5E-39 5.2E-44 344.8 15.4 259 288-562 54-336 (420)
222 2y4i_B KSR2, HKSR2, kinase sup 100.0 2E-40 6.9E-45 338.8 8.1 263 280-568 25-301 (319)
223 1phk_A Phosphorylase kinase; g 100.0 3.4E-39 1.2E-43 326.3 16.2 252 287-562 16-283 (298)
224 3cek_A Dual specificity protei 100.0 3.3E-39 1.1E-43 328.9 15.4 255 283-562 23-292 (313)
225 3e3p_A Protein kinase, putativ 100.0 7.1E-39 2.4E-43 333.1 17.8 269 281-562 16-314 (360)
226 1z57_A Dual specificity protei 100.0 1.5E-38 5.2E-43 327.3 20.0 259 287-562 13-328 (339)
227 4e7w_A Glycogen synthase kinas 100.0 3.6E-39 1.2E-43 339.1 15.6 260 288-563 40-322 (394)
228 3rgf_A Cyclin-dependent kinase 100.0 6E-39 2.1E-43 339.1 17.3 268 288-562 20-333 (405)
229 4exu_A Mitogen-activated prote 100.0 2E-38 6.8E-43 331.0 20.9 257 287-562 41-323 (371)
230 1q8y_A SR protein kinase; tran 100.0 2.1E-38 7E-43 331.2 20.6 265 287-562 18-333 (373)
231 1blx_A Cyclin-dependent kinase 100.0 8.6E-39 3E-43 327.7 17.3 264 286-562 9-296 (326)
232 1zy4_A Serine/threonine-protei 100.0 5.2E-39 1.8E-43 325.4 15.5 252 287-563 5-284 (303)
233 2vx3_A Dual specificity tyrosi 100.0 5E-38 1.7E-42 329.4 22.3 200 285-494 51-259 (382)
234 3coi_A Mitogen-activated prote 100.0 4.1E-38 1.4E-42 326.5 21.1 255 288-562 24-305 (353)
235 2wei_A Calmodulin-domain prote 100.0 5.5E-38 1.9E-42 315.8 21.3 253 285-562 19-276 (287)
236 3aln_A Dual specificity mitoge 100.0 5.9E-39 2E-43 329.2 13.8 258 287-562 21-285 (327)
237 2rio_A Serine/threonine-protei 100.0 1.5E-38 5E-43 338.8 17.0 252 289-562 16-295 (434)
238 3a99_A Proto-oncogene serine/t 100.0 6.6E-39 2.2E-43 327.8 13.7 245 283-562 38-293 (320)
239 3fhr_A MAP kinase-activated pr 100.0 1.6E-38 5.4E-43 327.1 15.7 252 287-562 27-287 (336)
240 2iwi_A Serine/threonine-protei 100.0 1E-38 3.6E-43 325.1 13.2 247 282-563 25-284 (312)
241 2i6l_A Mitogen-activated prote 100.0 4.3E-38 1.5E-42 321.4 17.7 258 287-562 10-305 (320)
242 2eu9_A Dual specificity protei 100.0 1.1E-37 3.6E-42 323.3 20.7 259 287-562 18-333 (355)
243 2dyl_A Dual specificity mitoge 100.0 1.3E-37 4.6E-42 317.6 20.4 252 287-562 24-283 (318)
244 3qa8_A MGC80376 protein; kinas 100.0 2.4E-38 8.1E-43 346.8 11.8 261 287-560 13-295 (676)
245 3p23_A Serine/threonine-protei 100.0 1.4E-37 4.8E-42 330.3 16.6 249 287-562 23-283 (432)
246 2pzi_A Probable serine/threoni 100.0 2.8E-37 9.6E-42 347.3 17.3 238 287-565 79-324 (681)
247 3uqc_A Probable conserved tran 100.0 1.8E-36 6.1E-41 304.3 16.0 229 287-567 30-263 (286)
248 2vuw_A Serine/threonine-protei 100.0 8.1E-37 2.8E-41 314.5 10.6 243 286-561 18-329 (336)
249 3m2w_A MAP kinase-activated pr 100.0 1.6E-35 5.5E-40 299.6 19.6 226 288-562 17-256 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 2.2E-36 7.4E-41 319.9 12.9 243 288-562 78-363 (413)
251 4azs_A Methyltransferase WBDD; 100.0 1.1E-29 3.7E-34 277.9 8.5 187 295-493 241-438 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 1.1E-26 3.7E-31 236.2 9.5 179 24-204 2-190 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 1.4E-26 4.7E-31 252.0 9.7 185 291-493 339-538 (540)
254 1zar_A RIO2 kinase; serine kin 99.9 2.5E-23 8.4E-28 207.6 12.1 153 281-466 83-252 (282)
255 3rgz_A Protein brassinosteroid 99.9 7.6E-24 2.6E-28 241.5 8.7 178 23-204 7-216 (768)
256 4ecn_A Leucine-rich repeat pro 99.9 2.6E-23 9E-28 236.4 4.9 172 26-202 267-562 (876)
257 4eco_A Uncharacterized protein 99.9 1.9E-22 6.4E-27 224.9 7.7 174 27-202 29-319 (636)
258 4fcg_A Uncharacterized protein 99.8 2E-22 6.7E-27 206.0 4.2 177 25-204 24-222 (328)
259 3e6j_A Variable lymphocyte rec 99.8 6E-21 2E-25 184.5 11.9 150 54-204 15-175 (229)
260 2v9t_B SLIT homolog 2 protein 99.8 1.8E-20 6.3E-25 179.9 9.9 147 57-203 10-167 (220)
261 2o6s_A Variable lymphocyte rec 99.8 8.4E-20 2.9E-24 173.7 12.3 148 57-204 6-164 (208)
262 2v70_A SLIT-2, SLIT homolog 2 99.8 5.1E-20 1.7E-24 176.8 9.7 147 58-204 11-169 (220)
263 3m19_A Variable lymphocyte rec 99.8 5E-19 1.7E-23 173.6 12.8 137 69-205 35-172 (251)
264 1zth_A RIO1 serine protein kin 99.8 2.8E-19 9.4E-24 176.0 10.5 138 290-443 49-220 (258)
265 3m19_A Variable lymphocyte rec 99.7 3.2E-18 1.1E-22 167.8 11.7 136 68-203 58-194 (251)
266 2o6q_A Variable lymphocyte rec 99.7 4.6E-18 1.6E-22 168.6 12.7 136 70-205 38-174 (270)
267 1w8a_A SLIT protein; signaling 99.7 7.2E-19 2.5E-23 164.9 5.3 128 73-203 12-141 (192)
268 3oja_A Leucine-rich immune mol 99.7 6.1E-19 2.1E-23 189.9 4.5 129 69-202 99-228 (487)
269 4g8a_A TOLL-like receptor 4; l 99.7 3.4E-18 1.2E-22 190.5 9.2 165 41-205 7-190 (635)
270 3rfs_A Internalin B, repeat mo 99.7 1.3E-17 4.5E-22 165.5 12.1 135 69-205 63-198 (272)
271 2xot_A Amphoterin-induced prot 99.7 8.8E-18 3E-22 173.9 8.6 147 58-204 18-179 (361)
272 1w8a_A SLIT protein; signaling 99.7 1.3E-17 4.4E-22 156.4 8.7 147 57-203 7-164 (192)
273 3rgz_A Protein brassinosteroid 99.7 1.1E-17 3.8E-22 190.5 9.5 120 91-211 630-749 (768)
274 1p9a_G Platelet glycoprotein I 99.7 3.4E-17 1.2E-21 163.9 11.4 135 67-204 53-188 (290)
275 2wfh_A SLIT homolog 2 protein 99.7 3E-17 1E-21 153.9 9.4 128 72-203 13-141 (193)
276 2o6q_A Variable lymphocyte rec 99.7 5.9E-17 2E-21 160.6 12.0 138 68-205 60-198 (270)
277 2ell_A Acidic leucine-rich nuc 99.7 1.7E-17 5.9E-22 152.0 7.3 135 69-205 24-164 (168)
278 2o6r_A Variable lymphocyte rec 99.7 3.2E-17 1.1E-21 151.6 9.1 133 58-204 7-140 (177)
279 1ogq_A PGIP-2, polygalacturona 99.7 1E-17 3.5E-22 169.9 6.3 133 70-204 175-307 (313)
280 2z62_A TOLL-like receptor 4, v 99.7 3.9E-17 1.3E-21 162.4 8.8 134 70-203 29-164 (276)
281 4gyi_A RIO2 kinase; protein ki 99.7 2.6E-17 9.1E-22 168.2 7.2 140 289-443 96-266 (397)
282 3v47_A TOLL-like receptor 5B a 99.7 6E-17 2.1E-21 173.1 9.2 137 69-205 275-412 (455)
283 3rfs_A Internalin B, repeat mo 99.7 2.1E-16 7.3E-21 156.8 12.1 138 68-205 84-222 (272)
284 2wfh_A SLIT homolog 2 protein 99.7 1.2E-16 4.3E-21 149.7 9.6 124 57-181 9-142 (193)
285 3v47_A TOLL-like receptor 5B a 99.7 7.3E-17 2.5E-21 172.5 8.5 152 55-206 5-172 (455)
286 3vq2_A TLR4, TOLL-like recepto 99.7 1.1E-16 3.9E-21 177.5 10.0 152 55-206 4-171 (606)
287 1ozn_A Reticulon 4 receptor; N 99.7 1.3E-16 4.5E-21 159.4 9.2 137 69-205 32-170 (285)
288 2je0_A Acidic leucine-rich nuc 99.7 3.4E-17 1.2E-21 146.7 4.4 127 69-197 17-149 (149)
289 2o6r_A Variable lymphocyte rec 99.7 1.8E-16 6.2E-21 146.5 9.3 115 68-182 27-141 (177)
290 4fcg_A Uncharacterized protein 99.6 1.3E-16 4.4E-21 162.8 8.3 136 68-206 103-247 (328)
291 1ozn_A Reticulon 4 receptor; N 99.6 4.2E-16 1.4E-20 155.7 11.5 138 68-205 55-194 (285)
292 1p9a_G Platelet glycoprotein I 99.6 4.5E-16 1.5E-20 155.8 11.6 135 69-206 31-166 (290)
293 3e6j_A Variable lymphocyte rec 99.6 4.3E-16 1.5E-20 150.3 11.0 140 59-205 13-152 (229)
294 2z80_A TOLL-like receptor 2, v 99.6 1.1E-16 3.9E-21 165.1 7.3 150 55-204 27-190 (353)
295 4b8c_D Glucose-repressible alc 99.6 6.9E-17 2.4E-21 181.9 5.7 175 26-204 130-332 (727)
296 2v9t_B SLIT homolog 2 protein 99.6 4.5E-16 1.5E-20 149.1 10.4 142 57-206 4-146 (220)
297 3oja_B Anopheles plasmodium-re 99.6 2.6E-16 9E-21 174.1 9.8 136 69-204 51-187 (597)
298 2z81_A CD282 antigen, TOLL-lik 99.6 1.2E-16 4.2E-21 175.0 7.0 148 57-205 3-165 (549)
299 2id5_A Lingo-1, leucine rich r 99.6 3.7E-16 1.3E-20 168.1 10.4 146 59-204 12-168 (477)
300 2v70_A SLIT-2, SLIT homolog 2 99.6 3.2E-16 1.1E-20 150.1 8.7 116 67-182 55-170 (220)
301 2xwt_C Thyrotropin receptor; s 99.6 2.6E-16 8.8E-21 153.0 8.1 140 63-204 18-172 (239)
302 2z66_A Variable lymphocyte rec 99.6 2.3E-16 7.8E-21 159.4 7.8 140 67-206 99-241 (306)
303 3zyj_A Leucine-rich repeat-con 99.6 7E-16 2.4E-20 164.2 11.7 145 60-204 45-201 (440)
304 2o6s_A Variable lymphocyte rec 99.6 4.1E-16 1.4E-20 148.1 8.7 134 68-207 51-184 (208)
305 3o6n_A APL1; leucine-rich repe 99.6 4.2E-16 1.4E-20 163.1 9.3 135 69-203 45-180 (390)
306 2xot_A Amphoterin-induced prot 99.6 1.3E-16 4.3E-21 165.2 5.0 137 67-203 62-204 (361)
307 3zyi_A Leucine-rich repeat-con 99.6 7.8E-16 2.7E-20 164.4 11.3 145 60-204 56-212 (452)
308 3t6q_A CD180 antigen; protein- 99.6 5.4E-16 1.8E-20 172.0 9.0 137 69-205 33-170 (606)
309 2z62_A TOLL-like receptor 4, v 99.6 1.6E-15 5.5E-20 150.7 10.0 113 69-181 52-165 (276)
310 4ezg_A Putative uncharacterize 99.6 5.5E-16 1.9E-20 145.9 6.2 130 69-203 44-174 (197)
311 2z66_A Variable lymphocyte rec 99.6 7E-16 2.4E-20 155.8 7.4 137 68-205 77-216 (306)
312 1ziw_A TOLL-like receptor 3; i 99.6 1.7E-15 5.8E-20 170.4 11.3 137 69-205 25-162 (680)
313 3vq2_A TLR4, TOLL-like recepto 99.6 6.2E-16 2.1E-20 171.5 7.5 135 69-203 399-536 (606)
314 3j0a_A TOLL-like receptor 5; m 99.6 8.3E-16 2.8E-20 176.9 7.9 146 58-204 14-164 (844)
315 3o53_A Protein LRIM1, AGAP0063 99.6 1.2E-15 4E-20 155.0 7.6 130 69-203 99-229 (317)
316 2r9u_A Variable lymphocyte rec 99.6 2.6E-15 8.8E-20 138.1 9.2 110 72-184 15-124 (174)
317 4ezg_A Putative uncharacterize 99.6 1.4E-15 4.8E-20 143.0 7.4 130 68-202 65-195 (197)
318 2ft3_A Biglycan; proteoglycan, 99.6 5.2E-15 1.8E-19 151.2 11.5 144 58-205 33-189 (332)
319 4g8a_A TOLL-like receptor 4; l 99.6 1.7E-15 5.9E-20 168.6 8.6 136 68-203 444-582 (635)
320 1a9n_A U2A', U2A'; complex (nu 99.6 1.1E-15 3.7E-20 141.0 5.8 130 68-201 18-153 (176)
321 1xku_A Decorin; proteoglycan, 99.6 6.7E-15 2.3E-19 150.2 12.1 145 57-204 30-187 (330)
322 3g39_A Variable lymphocyte rec 99.6 3.1E-15 1.1E-19 137.1 8.1 109 72-183 12-120 (170)
323 3zyj_A Leucine-rich repeat-con 99.6 3.1E-15 1.1E-19 159.1 9.1 137 68-206 135-273 (440)
324 2z63_A TOLL-like receptor 4, v 99.6 3E-15 1E-19 164.7 8.5 136 69-204 28-165 (570)
325 2xwt_C Thyrotropin receptor; s 99.6 2.9E-15 9.8E-20 145.5 6.7 135 68-204 54-196 (239)
326 2id5_A Lingo-1, leucine rich r 99.6 2.9E-15 9.9E-20 161.1 7.2 138 68-205 55-193 (477)
327 1wwl_A Monocyte differentiatio 99.5 8.6E-16 2.9E-20 155.6 2.8 135 69-204 95-244 (312)
328 1wwl_A Monocyte differentiatio 99.5 1.8E-15 6.1E-20 153.2 4.8 136 67-203 119-268 (312)
329 2z63_A TOLL-like receptor 4, v 99.5 4.3E-15 1.5E-19 163.4 8.0 138 68-206 372-512 (570)
330 3zyi_A Leucine-rich repeat-con 99.5 6.5E-15 2.2E-19 157.2 8.9 137 68-205 98-235 (452)
331 2ft3_A Biglycan; proteoglycan, 99.5 1.1E-14 3.8E-19 148.8 10.1 133 70-202 124-278 (332)
332 1dce_A Protein (RAB geranylger 99.5 6.7E-15 2.3E-19 160.7 8.8 120 70-194 442-566 (567)
333 3oja_B Anopheles plasmodium-re 99.5 7.4E-15 2.5E-19 162.4 9.2 133 69-203 75-207 (597)
334 2z80_A TOLL-like receptor 2, v 99.5 6.9E-15 2.4E-19 151.7 8.1 134 68-201 75-211 (353)
335 2z7x_B TOLL-like receptor 1, v 99.5 5.5E-15 1.9E-19 160.7 7.5 137 67-205 322-461 (520)
336 3o6n_A APL1; leucine-rich repe 99.5 1.3E-14 4.3E-19 151.8 9.9 133 69-203 69-201 (390)
337 1xku_A Decorin; proteoglycan, 99.5 1.9E-14 6.6E-19 146.8 11.1 135 69-203 121-278 (330)
338 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 1.2E-14 4.2E-19 159.6 9.4 138 66-205 350-490 (562)
339 4eco_A Uncharacterized protein 99.5 1.6E-15 5.4E-20 168.9 2.2 133 68-201 205-366 (636)
340 3g39_A Variable lymphocyte rec 99.5 1.5E-14 5E-19 132.6 8.1 107 95-204 11-118 (170)
341 3t6q_A CD180 antigen; protein- 99.5 5.8E-15 2E-19 163.7 6.3 137 68-205 399-540 (606)
342 2z7x_B TOLL-like receptor 1, v 99.5 1.6E-14 5.5E-19 157.1 9.5 133 68-203 347-483 (520)
343 1h6t_A Internalin B; cell adhe 99.5 2.6E-14 8.9E-19 143.1 10.0 126 69-203 68-193 (291)
344 4ecn_A Leucine-rich repeat pro 99.5 6.1E-15 2.1E-19 167.8 6.0 134 67-202 446-609 (876)
345 2r9u_A Variable lymphocyte rec 99.5 2E-14 6.8E-19 132.1 8.3 106 96-204 15-121 (174)
346 4glp_A Monocyte differentiatio 99.5 1.3E-14 4.5E-19 146.7 7.7 135 68-203 116-266 (310)
347 3oja_A Leucine-rich immune mol 99.5 6.7E-15 2.3E-19 158.3 5.6 134 69-205 58-208 (487)
348 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 2.3E-14 7.8E-19 157.4 9.9 135 67-204 375-513 (562)
349 1ziw_A TOLL-like receptor 3; i 99.5 1.8E-14 6.1E-19 162.0 9.1 137 69-205 49-188 (680)
350 4b8c_D Glucose-repressible alc 99.5 4.6E-15 1.6E-19 167.1 4.0 137 67-207 222-360 (727)
351 1xeu_A Internalin C; cellular 99.5 2.1E-14 7.3E-19 141.4 8.3 126 69-204 63-188 (263)
352 1h6u_A Internalin H; cell adhe 99.5 2.2E-14 7.4E-19 144.9 7.9 129 67-204 83-211 (308)
353 1h6t_A Internalin B; cell adhe 99.5 3.2E-14 1.1E-18 142.4 8.8 129 67-204 88-216 (291)
354 1h6u_A Internalin H; cell adhe 99.5 4.5E-14 1.5E-18 142.5 9.9 128 68-204 62-189 (308)
355 4glp_A Monocyte differentiatio 99.5 8.7E-15 3E-19 148.0 4.3 136 70-205 92-241 (310)
356 2ell_A Acidic leucine-rich nuc 99.5 2.2E-14 7.5E-19 131.1 5.6 113 90-204 21-136 (168)
357 2je0_A Acidic leucine-rich nuc 99.5 1.1E-14 3.8E-19 130.3 3.4 112 91-204 15-129 (149)
358 1xeu_A Internalin C; cellular 99.5 6.2E-14 2.1E-18 138.1 9.0 126 68-203 40-165 (263)
359 3cvr_A Invasion plasmid antige 99.5 4.6E-15 1.6E-19 161.3 0.6 138 47-204 33-176 (571)
360 4fmz_A Internalin; leucine ric 99.5 5.9E-14 2E-18 144.2 8.5 126 70-203 200-326 (347)
361 2z81_A CD282 antigen, TOLL-lik 99.5 4.5E-14 1.5E-18 154.6 7.8 131 68-198 49-182 (549)
362 2ifg_A High affinity nerve gro 99.5 3.5E-14 1.2E-18 145.9 5.8 135 58-206 8-146 (347)
363 1m9s_A Internalin B; cell inva 99.5 1.3E-13 4.3E-18 151.6 10.3 127 68-203 64-190 (605)
364 3o53_A Protein LRIM1, AGAP0063 99.4 4.8E-14 1.7E-18 143.0 5.4 125 69-202 80-205 (317)
365 1ds9_A Outer arm dynein; leuci 99.4 8.7E-16 3E-20 144.6 -7.2 130 70-204 19-156 (198)
366 1m9s_A Internalin B; cell inva 99.4 1.5E-13 5E-18 151.1 9.3 130 67-205 85-214 (605)
367 3j0a_A TOLL-like receptor 5; m 99.4 2.1E-13 7.3E-18 156.8 9.5 132 69-204 266-397 (844)
368 4ay9_X Follicle-stimulating ho 99.4 1.4E-13 4.8E-18 141.6 6.9 147 58-204 9-170 (350)
369 1o6v_A Internalin A; bacterial 99.4 4E-13 1.4E-17 143.9 8.8 128 69-205 243-370 (466)
370 1o6v_A Internalin A; bacterial 99.4 5E-13 1.7E-17 143.1 9.2 127 68-203 220-346 (466)
371 1a9n_A U2A', U2A'; complex (nu 99.4 1.2E-13 4.2E-18 127.2 3.8 112 88-203 14-128 (176)
372 3cvr_A Invasion plasmid antige 99.4 4.6E-13 1.6E-17 145.6 8.0 118 68-204 99-223 (571)
373 1ds9_A Outer arm dynein; leuci 99.4 5.6E-15 1.9E-19 139.0 -7.5 128 68-202 47-186 (198)
374 1dce_A Protein (RAB geranylger 99.4 5.4E-13 1.8E-17 145.7 6.9 107 94-205 442-550 (567)
375 4fmz_A Internalin; leucine ric 99.3 8.2E-13 2.8E-17 135.6 7.8 127 69-204 177-303 (347)
376 2ifg_A High affinity nerve gro 99.3 6.6E-13 2.3E-17 136.4 7.1 107 96-204 11-119 (347)
377 3bz5_A Internalin-J, INLJ; leu 99.3 6.5E-12 2.2E-16 133.8 11.7 129 61-202 98-226 (457)
378 2ca6_A RAN GTPase-activating p 99.3 1.3E-13 4.4E-18 143.9 -1.9 134 69-202 122-288 (386)
379 3bz5_A Internalin-J, INLJ; leu 99.3 6.5E-12 2.2E-16 133.8 11.2 117 69-198 42-158 (457)
380 3g06_A SSPH2 (leucine-rich rep 99.3 8E-13 2.7E-17 145.4 3.6 139 46-204 11-157 (622)
381 3tm0_A Aminoglycoside 3'-phosp 99.3 1.9E-11 6.6E-16 120.1 12.7 145 286-441 12-213 (263)
382 3goz_A Leucine-rich repeat-con 99.3 4.4E-13 1.5E-17 138.6 -0.5 135 69-203 22-182 (362)
383 1jl5_A Outer protein YOPM; leu 99.2 1.3E-11 4.5E-16 131.3 10.4 117 70-201 112-228 (454)
384 2ast_B S-phase kinase-associat 99.2 1.8E-13 6.2E-18 139.8 -4.1 131 69-199 93-233 (336)
385 2ca6_A RAN GTPase-activating p 99.2 4.6E-13 1.6E-17 139.7 -1.6 133 69-201 94-257 (386)
386 2ast_B S-phase kinase-associat 99.2 7.6E-13 2.6E-17 135.2 -1.0 132 68-199 117-258 (336)
387 3goz_A Leucine-rich repeat-con 99.2 1.7E-12 5.7E-17 134.2 0.4 130 73-202 2-152 (362)
388 3g06_A SSPH2 (leucine-rich rep 99.2 1.7E-11 6E-16 134.8 8.5 56 141-203 221-276 (622)
389 4ay9_X Follicle-stimulating ho 99.2 1.4E-11 4.9E-16 126.5 5.7 134 63-203 7-144 (350)
390 1nd4_A Aminoglycoside 3'-phosp 99.2 1.2E-10 4E-15 114.1 11.7 129 297-441 29-214 (264)
391 1jl5_A Outer protein YOPM; leu 99.2 6.3E-11 2.1E-15 126.1 10.4 121 69-204 91-211 (454)
392 3dxp_A Putative acyl-COA dehyd 99.1 4.5E-10 1.5E-14 115.7 13.2 143 293-442 43-249 (359)
393 1z7x_W Ribonuclease inhibitor; 99.1 3.6E-12 1.2E-16 136.1 -4.6 133 69-201 227-383 (461)
394 3sg8_A APH(2'')-ID; antibiotic 99.0 5.8E-10 2E-14 112.0 7.1 187 293-494 25-288 (304)
395 1z7x_W Ribonuclease inhibitor; 98.9 3.6E-11 1.2E-15 128.3 -2.6 135 68-202 112-270 (461)
396 3un9_A NLR family member X1; l 98.9 2E-11 7E-16 126.1 -4.7 134 69-202 101-253 (372)
397 3un9_A NLR family member X1; l 98.8 5.7E-11 2E-15 122.7 -5.8 133 69-201 72-224 (372)
398 3sb4_A Hypothetical leucine ri 98.8 3.6E-09 1.2E-13 107.5 6.8 135 68-205 100-314 (329)
399 3rw6_A Nuclear RNA export fact 98.8 1.5E-10 5.3E-15 112.6 -5.3 79 114-194 167-257 (267)
400 3rw6_A Nuclear RNA export fact 98.6 4.9E-09 1.7E-13 102.0 1.6 80 90-171 167-257 (267)
401 3ogk_B Coronatine-insensitive 98.6 1.3E-09 4.5E-14 120.1 -3.7 135 69-203 378-528 (592)
402 1io0_A Tropomodulin; LRR prote 98.6 4.7E-09 1.6E-13 97.1 -0.1 111 68-178 35-164 (185)
403 3r70_A Aminoglycoside phosphot 98.6 3E-07 1E-11 92.8 12.7 138 289-443 38-239 (320)
404 3sb4_A Hypothetical leucine ri 98.6 3.1E-08 1.1E-12 100.5 5.4 124 69-194 202-327 (329)
405 3ogk_B Coronatine-insensitive 98.5 1.6E-08 5.5E-13 111.4 2.1 104 70-174 139-252 (592)
406 1io0_A Tropomodulin; LRR prote 98.5 3.4E-09 1.2E-13 98.0 -4.2 119 82-200 25-163 (185)
407 3d1u_A Putative fructosamine-3 98.4 1.6E-06 5.4E-11 85.9 12.6 141 293-440 20-215 (288)
408 4gkh_A Aminoglycoside 3'-phosp 98.4 1.8E-06 6.3E-11 84.6 12.9 135 295-441 31-223 (272)
409 2p1m_B Transport inhibitor res 98.4 1.7E-08 6E-13 111.1 -3.1 60 140-199 455-517 (594)
410 3tdw_A Gentamicin resistance p 98.4 3.2E-06 1.1E-10 84.6 13.6 136 294-442 25-225 (306)
411 2p1m_B Transport inhibitor res 98.3 4.2E-08 1.4E-12 108.0 -3.6 130 69-198 105-245 (594)
412 3ovc_A Hygromycin-B 4-O-kinase 98.2 6.8E-06 2.3E-10 84.2 12.4 143 293-443 46-245 (362)
413 2ra8_A Uncharacterized protein 98.2 1.9E-07 6.5E-12 95.5 0.2 60 87-149 166-227 (362)
414 3ats_A Putative uncharacterize 98.2 3.9E-06 1.3E-10 85.9 10.0 81 294-374 26-122 (357)
415 4fdw_A Leucine rich hypothetic 98.1 5.9E-06 2E-10 85.9 8.7 127 70-200 204-357 (401)
416 2ra8_A Uncharacterized protein 98.0 6.7E-07 2.3E-11 91.5 0.5 131 68-202 171-321 (362)
417 4fdw_A Leucine rich hypothetic 98.0 3.9E-06 1.3E-10 87.3 6.2 111 69-183 248-363 (401)
418 2q83_A YTAA protein; 2635576, 98.0 3.8E-05 1.3E-09 77.9 13.1 141 294-440 38-251 (346)
419 2olc_A MTR kinase, methylthior 98.0 4.2E-05 1.4E-09 79.5 12.3 76 293-370 35-120 (397)
420 3jr1_A Putative fructosamine-3 97.8 0.0002 6.8E-09 71.4 13.1 139 293-437 41-232 (312)
421 3e4g_A ATP synthase subunit S, 97.7 3.5E-06 1.2E-10 75.9 -0.6 83 70-152 62-150 (176)
422 3e4g_A ATP synthase subunit S, 97.7 7.3E-06 2.5E-10 73.9 1.4 86 93-178 61-153 (176)
423 1pgv_A TMD-1, tropomodulin TMD 97.7 7.3E-06 2.5E-10 75.3 0.7 83 69-151 41-136 (197)
424 2pyw_A Uncharacterized protein 97.6 0.00046 1.6E-08 72.1 12.8 79 410-490 231-313 (420)
425 3f7w_A Putative fructosamine-3 97.5 0.00033 1.1E-08 69.1 10.5 79 289-372 16-97 (288)
426 3dxq_A Choline/ethanolamine ki 97.4 0.0007 2.4E-08 67.2 10.9 140 293-442 23-203 (301)
427 4gt6_A Cell surface protein; l 97.3 0.0002 6.7E-09 74.3 5.2 109 86-198 258-367 (394)
428 2ppq_A HSK, HK, homoserine kin 97.3 0.0012 4.2E-08 66.0 10.9 159 278-440 7-216 (322)
429 3rfe_A Platelet glycoprotein I 97.2 0.00022 7.6E-09 61.1 4.0 56 97-154 12-68 (130)
430 3rfe_A Platelet glycoprotein I 97.2 0.00041 1.4E-08 59.4 5.6 57 72-130 11-68 (130)
431 3csv_A Aminoglycoside phosphot 97.2 0.0014 4.9E-08 65.9 10.2 144 294-443 24-219 (333)
432 1nw1_A Choline kinase (49.2 KD 97.1 0.0015 5.2E-08 68.2 10.3 73 294-373 79-160 (429)
433 1zyl_A Hypothetical protein YI 97.1 0.0055 1.9E-07 61.3 14.0 142 295-441 33-223 (328)
434 4h09_A Hypothetical leucine ri 97.0 0.00096 3.3E-08 68.5 7.4 111 84-197 231-342 (379)
435 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00012 4.3E-09 67.1 0.5 92 85-176 33-137 (197)
436 4h09_A Hypothetical leucine ri 97.0 0.0011 3.6E-08 68.2 7.5 108 69-180 240-347 (379)
437 3feg_A Choline/ethanolamine ki 97.0 0.0045 1.5E-07 63.3 11.8 142 294-441 56-254 (379)
438 4gt6_A Cell surface protein; l 96.9 0.00074 2.5E-08 69.9 5.6 124 70-199 266-389 (394)
439 3i1a_A Spectinomycin phosphotr 96.8 0.0081 2.8E-07 60.6 12.4 32 411-442 206-237 (339)
440 3c5i_A Choline kinase; choline 96.8 0.0046 1.6E-07 63.2 10.5 73 294-372 39-121 (369)
441 4fs7_A Uncharacterized protein 96.8 0.002 6.9E-08 66.5 7.3 55 70-126 72-126 (394)
442 4fs7_A Uncharacterized protein 96.6 0.0023 7.7E-08 66.2 6.5 55 70-126 231-285 (394)
443 2qg7_A Ethanolamine kinase PV0 96.5 0.0092 3.1E-07 62.7 10.5 74 294-373 114-189 (458)
444 2yle_A Protein spire homolog 1 96.2 0.012 4E-07 54.3 8.1 102 370-491 33-134 (229)
445 3mes_A Choline kinase; malaria 95.5 0.039 1.3E-06 57.2 9.3 141 294-441 76-291 (424)
446 3f2s_A CK, chetk-alpha, cholin 95.2 0.096 3.3E-06 53.7 10.9 143 294-440 58-279 (401)
447 3g15_A CK, chetk-alpha, cholin 92.0 0.66 2.2E-05 47.6 10.4 30 412-441 245-280 (401)
448 4ann_A ESSB; membrane protein, 90.4 0.58 2E-05 43.0 7.1 117 342-494 42-158 (215)
449 2ks1_B Epidermal growth factor 90.2 0.2 7E-06 33.0 2.7 33 224-256 9-41 (44)
450 4ano_A ESSB; membrane protein, 90.0 0.83 2.8E-05 42.1 7.8 115 343-494 48-163 (219)
451 2l2t_A Receptor tyrosine-prote 88.4 0.23 7.8E-06 32.7 1.9 34 224-257 8-41 (44)
452 3cxl_A N-chimerin; SH2, RHO-GA 75.3 0.42 1.4E-05 50.1 -1.1 62 292-356 146-215 (463)
453 2k1k_A Ephrin type-A receptor 60.4 3.8 0.00013 26.0 1.5 29 225-253 10-38 (38)
454 2jwa_A Receptor tyrosine-prote 55.6 4.2 0.00014 26.6 1.1 28 228-256 14-41 (44)
455 2lz0_A Uncharacterized protein 50.2 24 0.00082 27.8 5.1 47 80-127 7-53 (100)
456 2k9y_A Ephrin type-A receptor 47.0 9.2 0.00032 24.5 1.8 26 227-252 14-39 (41)
457 2lz0_A Uncharacterized protein 46.4 20 0.00069 28.2 4.1 44 105-149 8-51 (100)
458 1cja_A Protein (actin-fragmin 29.4 1.2E+02 0.0041 29.6 7.2 79 359-441 156-237 (342)
459 1iij_A ERBB-2 receptor protein 25.8 15 0.00052 22.6 0.1 26 228-254 10-35 (35)
460 2l9u_A Receptor tyrosine-prote 20.7 21 0.00071 21.6 -0.0 24 232-255 12-35 (40)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8e-55 Score=439.31 Aligned_cols=259 Identities=23% Similarity=0.367 Sum_probs=211.5
Q ss_pred hCCCCCCccccCcCcEEEEEEeC------CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
+++...+.||+|+||+||+|++. +++.||||+++..........|.+|+.++++++|||||+++|+|.++...+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 34556788999999999999863 467899999987665556778999999999999999999999999999999
Q ss_pred EEEecccCCcchhhhhccCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC
Q 007200 362 LVYPFMVNGSVASCLRERGQS------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF 429 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~ 429 (613)
+|||||++|+|.++++..... ...++|..+..|+.|||+||+|||++ +||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 999999999999999754321 23589999999999999999999999 999999999999999999
Q ss_pred cEEEeccccceecCCCCC-ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHH
Q 007200 430 EAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLL 507 (613)
Q Consensus 430 ~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~ 507 (613)
++||+|||+++.....+. .......||+.|||||++.++.++.++|||||||++|||+| |+.||.... . .
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~-----~---~ 254 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-----N---Q 254 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC-----H---H
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC-----H---H
Confidence 999999999987644332 22344569999999999999999999999999999999999 899995221 1 1
Q ss_pred HHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 508 DWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
+.+.. +..+... ..+..++..+.+++.+||+.||++||||+||++.|+..
T Consensus 255 ~~~~~-i~~~~~~---------~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 255 DVVEM-IRNRQVL---------PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHH-HHTTCCC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHH-HHcCCCC---------CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 22222 2211111 11223456789999999999999999999999999853
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=9.4e-55 Score=436.92 Aligned_cols=257 Identities=26% Similarity=0.436 Sum_probs=209.6
Q ss_pred hCCCCCCccccCcCcEEEEEEeC------CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
++|.+.+.||+|+||+||+|++. ++..||||+++... .....+|.+|++++++++|||||+++|+|.+++..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 56788899999999999999864 46789999997543 334567999999999999999999999999999999
Q ss_pred EEEecccCCcchhhhhccC---------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 007200 362 LVYPFMVNGSVASCLRERG---------QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 432 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 432 (613)
+|||||++|+|.++++..+ .....++|..+..|+.||++||+|||++ +||||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 9999999999999997643 2234699999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCce-eeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHH
Q 007200 433 VGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWV 510 (613)
Q Consensus 433 l~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~ 510 (613)
|+|||+|+......... .....||+.|||||++.+..++.++|||||||++|||+| |+.||.... ..+.+
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--------~~~~~ 240 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--------NNEVI 240 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHH
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--------HHHHH
Confidence 99999998765433322 233458999999999999999999999999999999999 899996321 11222
Q ss_pred HHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 511 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
......... ..+..++..+.+++.+||+.||++|||++||.+.|++
T Consensus 241 ~~i~~~~~~----------~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~ 286 (299)
T 4asz_A 241 ECITQGRVL----------QRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQN 286 (299)
T ss_dssp HHHHHTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHcCCCC----------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 222221111 1122344678999999999999999999999999875
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-53 Score=428.97 Aligned_cols=261 Identities=26% Similarity=0.416 Sum_probs=203.4
Q ss_pred HHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEecccc-CcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 284 QVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 284 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
++..+++.+.+.||+|+||+||+|++. ..||||+++... .......|.+|+.++++++|||||+++|++.+ +..++
T Consensus 32 ei~~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~i 108 (307)
T 3omv_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EEcHHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEE
Confidence 344567888899999999999999875 359999987543 23345679999999999999999999998865 56899
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
|||||++|+|.++++.... ++++..+..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+..
T Consensus 109 VmEy~~gGsL~~~l~~~~~---~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 182 (307)
T 3omv_A 109 VTQWCEGSSLYKHLHVQET---KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp EEECCSSCBHHHHHHTSCC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC-
T ss_pred EEEcCCCCCHHHHHhhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceec
Confidence 9999999999999976432 499999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCC-Cceeecccccccccccccccc---CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccc
Q 007200 443 DYKD-THVTTAVRGTIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 518 (613)
Q Consensus 443 ~~~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (613)
.... ........||+.|||||++.+ ++|+.++|||||||++|||+||+.||.... . ...+........
T Consensus 183 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-----~---~~~~~~~~~~~~ 254 (307)
T 3omv_A 183 SRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-----N---RDQIIFMVGRGY 254 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----C---HHHHHHHHHTTC
T ss_pred ccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCC-----h---HHHHHHHHhcCC
Confidence 5332 223345679999999999964 468999999999999999999999995221 1 111112221111
Q ss_pred ccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 519 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
. .+.. ......++..+.+++.+||+.||++||||.||++.|+.
T Consensus 255 ~----~p~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~ 297 (307)
T 3omv_A 255 A----SPDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp C----CCCS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHH
T ss_pred C----CCCc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 1 1111 11122345678999999999999999999999998864
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=7e-54 Score=436.50 Aligned_cols=258 Identities=27% Similarity=0.450 Sum_probs=204.1
Q ss_pred hCCCCCCccccCcCcEEEEEEeC------CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
++|.+.++||+|+||+||+|++. +++.||||+++.. ......+|.+|++++++++|||||+++|+|.++...+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 45677789999999999999864 4778999999754 3334567999999999999999999999999999999
Q ss_pred EEEecccCCcchhhhhccCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc
Q 007200 362 LVYPFMVNGSVASCLRERGQ-----------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 430 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 430 (613)
+|||||++|+|.++++.... ...+++|..+..|+.||++||+|||++ +||||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 99999999999999976432 124699999999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCC-ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHH
Q 007200 431 AVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLD 508 (613)
Q Consensus 431 ~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~ 508 (613)
+||+|||+++....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||.... ..+
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--------~~~ 268 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--------NTE 268 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--------HHH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC--------HHH
Confidence 99999999987654332 22344569999999999999999999999999999999999 899996321 112
Q ss_pred HHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 509 WVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
.+......... . .+..++..+.+++.+||+.||++||||+||++.|+.+
T Consensus 269 ~~~~i~~g~~~------~----~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l 317 (329)
T 4aoj_A 269 AIDCITQGREL------E----RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317 (329)
T ss_dssp HHHHHHHTCCC------C----CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCC------C----CcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 22222221111 1 1223346789999999999999999999999999753
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.3e-53 Score=432.74 Aligned_cols=251 Identities=21% Similarity=0.332 Sum_probs=203.4
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
++|++.+.||+|+||+||+|++. +|+.||||++..... ......+.+|+.++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 67999999999999999999976 799999999976543 3335678999999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
||+||+|.+++..... ..+++..++.|+.||+.||+|||++ +||||||||+|||+++++.+||+|||+|+.....
T Consensus 104 y~~gg~L~~~i~~~~~--~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp CCTTCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred CCCCCcHHHHHHHcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 9999999999976432 2479999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccC
Q 007200 446 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 525 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (613)
.......+||+.|||||++.+..|+.++|||||||++|||+||+.||.... ..+.+........ .
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~~~~-~----- 243 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS--------MKNLVLKIISGSF-P----- 243 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHTCC-C-----
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHcCCC-C-----
Confidence 122344679999999999999999999999999999999999999996321 2222222222211 0
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 526 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 526 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. .......+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 244 PV----SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 1123457889999999999999999999986
No 6
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2.6e-52 Score=428.49 Aligned_cols=325 Identities=94% Similarity=1.423 Sum_probs=274.9
Q ss_pred ccCCCCCCcccccCcccccCHHHHHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHH
Q 007200 260 FDVPAEEDPEVHLGQLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMI 339 (613)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l 339 (613)
++.+.++++....+..+.++..++....++|...+.||+|+||.||+|...+|+.||||++...........+.+|++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l 81 (326)
T 3uim_A 2 FDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMI 81 (326)
T ss_dssp -------------CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGG
T ss_pred CCCCcccCcccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHH
Confidence 35566777778888899999999999999999999999999999999998889999999998765444444789999999
Q ss_pred hhcccCccceeeEEEEcCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 007200 340 SMAVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVK 419 (613)
Q Consensus 340 ~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk 419 (613)
+.++||||+++++++.++...++||||+.+|+|.++++.......++++..+..++.|++.||+|||+++.++|+|||||
T Consensus 82 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlk 161 (326)
T 3uim_A 82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVK 161 (326)
T ss_dssp GTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCS
T ss_pred HhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCc
Confidence 99999999999999999999999999999999999998876666679999999999999999999999877789999999
Q ss_pred CCceeecCCCcEEEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCccccccc
Q 007200 420 AANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 499 (613)
Q Consensus 420 ~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~ 499 (613)
|+||+++.++.+||+|||+++..............||+.|+|||.+.+..++.++||||||+++|||++|+.||+.....
T Consensus 162 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 241 (326)
T 3uim_A 162 AANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 241 (326)
T ss_dssp GGGEEECTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHT
T ss_pred hhhEEECCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccc
Confidence 99999999999999999999987665555556667999999999999989999999999999999999999999877666
Q ss_pred CCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCcchhhHHHhhh
Q 007200 500 NDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGLAERWEEWQKE 579 (613)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~~~ 579 (613)
........+|+.............+.........+....+.+++..||+.||++|||+.||++.|++..+.+.|.++..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 321 (326)
T 3uim_A 242 NDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKE 321 (326)
T ss_dssp TTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSCC-----
T ss_pred cccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhhhhhhHH
Confidence 77778888999888888888888888888888899999999999999999999999999999999999999999999988
Q ss_pred hhhcc
Q 007200 580 EMFRQ 584 (613)
Q Consensus 580 ~~~~~ 584 (613)
+..+|
T Consensus 322 ~~~~q 326 (326)
T 3uim_A 322 EMFRQ 326 (326)
T ss_dssp -----
T ss_pred HhhcC
Confidence 87664
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=2.1e-52 Score=425.02 Aligned_cols=249 Identities=21% Similarity=0.317 Sum_probs=207.1
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEec
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 366 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 366 (613)
+.|+..+.||+|+||+||+|++. +|+.||||++...... ....+.+|+.+++.++|||||++++++.+++..|+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS-SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh-HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 46888899999999999999986 7999999999754332 344688999999999999999999999999999999999
Q ss_pred ccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCCC
Q 007200 367 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 446 (613)
Q Consensus 367 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 446 (613)
|++|+|.+++... .+++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+....
T Consensus 153 ~~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 224 (346)
T 4fih_A 153 LEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 224 (346)
T ss_dssp CTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred CCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence 9999999999753 389999999999999999999999 99999999999999999999999999998775432
Q ss_pred CceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccCc
Q 007200 447 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 526 (613)
Q Consensus 447 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (613)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||... .. .+.+........ +.
T Consensus 225 -~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~---~~~~~~i~~~~~------~~ 289 (346)
T 4fih_A 225 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PP---LKAMKMIRDNLP------PR 289 (346)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CH---HHHHHHHHHSSC------CC
T ss_pred -CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CH---HHHHHHHHcCCC------CC
Confidence 2344567999999999999999999999999999999999999999522 11 111111111110 00
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 527 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 527 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
..........+.+++.+||+.||++|||+.|+++
T Consensus 290 --~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 290 --LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp --CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1112233467889999999999999999999886
No 8
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=6.1e-53 Score=432.99 Aligned_cols=269 Identities=27% Similarity=0.399 Sum_probs=219.1
Q ss_pred cCHHHHHHHhhCCCCCCccccCcCcEEEEEEeCC------CCEEEEEEeccccCcccHHHHHHHHHHHhhccc-Ccccee
Q 007200 278 FSLRELQVATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVH-RNLLRL 350 (613)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l 350 (613)
+...++++..++|++.+.||+|+||+||+|.+.. ++.||||.++..........|.+|++++.++.| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4456788888999999999999999999998642 357999999876666566789999999999975 899999
Q ss_pred eEEEEcC-CceEEEEecccCCcchhhhhccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 007200 351 RGFCMTP-TERLLVYPFMVNGSVASCLRERGQ------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRD 417 (613)
Q Consensus 351 ~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 417 (613)
+|+|.++ ...++|||||++|+|.++++.... ....+++..+..++.|||+||+|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 9999765 568999999999999999975321 134589999999999999999999999 999999
Q ss_pred CCCCceeecCCCcEEEeccccceecCCCCCc-eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCccc
Q 007200 418 VKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDL 495 (613)
Q Consensus 418 lk~~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~ 495 (613)
|||+|||+++++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+| |+.||..
T Consensus 211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~ 290 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290 (353)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999999876544332 3445679999999999999999999999999999999998 9999953
Q ss_pred ccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 496 ARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
.. .. +.+...+..+.. .. .+..+...+.+++.+||+.||++|||+.||++.|+.
T Consensus 291 ~~----~~----~~~~~~i~~g~~-----~~----~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ 344 (353)
T 4ase_A 291 VK----ID----EEFCRRLKEGTR-----MR----APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 344 (353)
T ss_dssp CC----CS----HHHHHHHHHTCC-----CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC----HH----HHHHHHHHcCCC-----CC----CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHH
Confidence 21 11 112222222111 11 112234578899999999999999999999999875
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.2e-52 Score=423.60 Aligned_cols=250 Identities=22% Similarity=0.245 Sum_probs=203.1
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEec
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 366 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 366 (613)
+.|...++||+|+||+||+|++. +|+.||||+++.... ..+|+.+++.++|||||++++++.+++..|+||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45777889999999999999976 699999999976432 24799999999999999999999999999999999
Q ss_pred ccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-cEEEeccccceecCCC
Q 007200 367 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF-EAVVGDFGLAKLMDYK 445 (613)
Q Consensus 367 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~DfGla~~~~~~ 445 (613)
|+||+|.++++..+ ++++..+..++.||+.||+|||++ +||||||||+|||++.++ .+||+|||+|+.+...
T Consensus 132 ~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 99999999998754 399999999999999999999999 999999999999999987 6999999999977543
Q ss_pred CCc----eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 446 DTH----VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 446 ~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
... .....+||+.|||||++.+..|+.++|||||||++|||+||+.||..... . .+...+ .......
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~----~-~~~~~i---~~~~~~~- 275 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR----G-PLCLKI---ASEPPPI- 275 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC----S-CCHHHH---HHSCCGG-
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH----H-HHHHHH---HcCCCCc-
Confidence 211 12335799999999999999999999999999999999999999963221 1 111111 1111000
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
...+......+.+++.+||+.||++|||+.|+++.|..
T Consensus 276 -------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~ 313 (336)
T 4g3f_A 276 -------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK 313 (336)
T ss_dssp -------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence 01122234678899999999999999999999998753
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.1e-52 Score=415.53 Aligned_cols=245 Identities=25% Similarity=0.376 Sum_probs=196.1
Q ss_pred CCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc-CcccHHHHHHHHHHHhhcccCccceeeEEEEc----CCceEEEE
Q 007200 291 SNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMT----PTERLLVY 364 (613)
Q Consensus 291 ~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~ 364 (613)
...+.||+|+||+||+|.+. ++..||+|++.... .......|.+|++++++++|||||++++++.+ +...++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999976 68899999997544 33345679999999999999999999999865 34579999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeecC-CCcEEEecccccee
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK--IIHRDVKAANILLDE-EFEAVVGDFGLAKL 441 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~~-~~~~kl~DfGla~~ 441 (613)
|||++|+|.++++... ++++..+..++.||+.||+|||++ + ||||||||+|||++. ++.+||+|||+|+.
T Consensus 109 Ey~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH~~---~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 9999999999998754 389999999999999999999998 6 999999999999984 78999999999985
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 442 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 442 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
... ......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.... ......... .......
T Consensus 182 ~~~---~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~-------~~~~~~~~i-~~~~~~~ 249 (290)
T 3fpq_A 182 KRA---SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ-------NAAQIYRRV-TSGVKPA 249 (290)
T ss_dssp CCT---TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS-------SHHHHHHHH-TTTCCCG
T ss_pred CCC---CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCC-------cHHHHHHHH-HcCCCCC
Confidence 432 22345679999999998865 69999999999999999999999995221 111111111 1111100
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. +......+.+++.+||+.||++|||++|+++
T Consensus 250 ~~--------~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 250 SF--------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GG--------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CC--------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 01 1112246889999999999999999999987
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.2e-52 Score=416.48 Aligned_cols=248 Identities=22% Similarity=0.320 Sum_probs=208.5
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
++|++.+.||+|+||+||+|++. +|+.||||++.+.. .......+.+|++++++++||||+++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 56999999999999999999976 79999999997543 2234567899999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
|||+||+|.++++..+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 112 Ey~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 9999999999998754 399999999999999999999999 999999999999999999999999999998754
Q ss_pred CC-CceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 445 KD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 445 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.. .......+||+.|||||++.+..|+.++||||+||++|||+||+.||.... ..+......... .
T Consensus 185 ~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--------~~~~~~~i~~~~-~---- 251 (311)
T 4aw0_A 185 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN--------EGLIFAKIIKLE-Y---- 251 (311)
T ss_dssp TTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC-C----
T ss_pred CCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCC-C----
Confidence 33 233456789999999999999999999999999999999999999996321 112222222211 1
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVV 561 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 561 (613)
..+ ......+.+++.+||+.||++|||++|++
T Consensus 252 --~~p----~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 252 --DFP----EKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp --CCC----TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred --CCC----cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 111 12235688999999999999999999874
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=7.4e-51 Score=423.71 Aligned_cols=249 Identities=21% Similarity=0.326 Sum_probs=207.0
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEec
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 366 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 366 (613)
+.|+..+.||+|+||+||+|++. +|+.||||++...... ....+.+|+.+++.++|||||++++++.+++..|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS-SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh-HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 56999999999999999999986 7999999999754332 345688999999999999999999999999999999999
Q ss_pred ccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCCC
Q 007200 367 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 446 (613)
Q Consensus 367 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 446 (613)
|+||+|.++++.. .+++..+..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 230 ~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~ 301 (423)
T 4fie_A 230 LEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV 301 (423)
T ss_dssp CTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred CCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence 9999999999753 289999999999999999999999 99999999999999999999999999998775432
Q ss_pred CceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccCc
Q 007200 447 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 526 (613)
Q Consensus 447 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (613)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||... .. .+.+........ +.
T Consensus 302 -~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~-----~~---~~~~~~i~~~~~------~~ 366 (423)
T 4fie_A 302 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE-----PP---LKAMKMIRDNLP------PR 366 (423)
T ss_dssp -CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----CH---HHHHHHHHHSCC------CC
T ss_pred -ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----CH---HHHHHHHHcCCC------CC
Confidence 2344567999999999999999999999999999999999999999522 11 111111111110 00
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 527 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 527 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. .........+.+++.+||..||++|||+.|+++
T Consensus 367 ~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 367 L--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp C--SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred C--cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 0 111123357889999999999999999999986
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-51 Score=415.34 Aligned_cols=267 Identities=22% Similarity=0.302 Sum_probs=202.0
Q ss_pred hCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCC----ceEEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT----ERLLV 363 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~lv 363 (613)
++|.+.+.||+|+||+||+|++. |+.||||+++.... ....++.|+..+.+++||||++++|++.+++ ..++|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~--~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREE--RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGH--HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccch--hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 45777889999999999999984 89999999965421 1223445666677899999999999998654 57999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCceeecCCCcEEEecccc
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC-----DPKIIHRDVKAANILLDEEFEAVVGDFGL 438 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 438 (613)
||||++|+|.++++.. +++|..+.+++.|+++||+|||+++ .++||||||||+|||++.++++||+|||+
T Consensus 80 ~Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl 154 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 154 (303)
T ss_dssp EECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence 9999999999999764 3899999999999999999999762 45899999999999999999999999999
Q ss_pred ceecCCCCCce---eeccccccccccccccccC------CCCCcccchhHHHHHHHHHhCCCCcccccccCC------Cc
Q 007200 439 AKLMDYKDTHV---TTAVRGTIGHIAPEYLSTG------KSSEKTDVFGYGVMLLELITGQRAFDLARLAND------DD 503 (613)
Q Consensus 439 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~------~~ 503 (613)
|+......... .....||+.|||||++.+. .++.++|||||||++|||+||++||........ ..
T Consensus 155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~ 234 (303)
T 3hmm_A 155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPS 234 (303)
T ss_dssp CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCS
T ss_pred CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccc
Confidence 98775443322 2345699999999999764 367899999999999999999988753221110 00
Q ss_pred chHHHHHHHHhhcccccccccCccCCC-CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 504 VMLLDWVKGLLKEKKLEQLVDSDMEGN-YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
......+........ .++..+.. ...+....+.+++.+||+.||++||||.||++.|+.
T Consensus 235 ~~~~~~~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~ 294 (303)
T 3hmm_A 235 DPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQ 294 (303)
T ss_dssp SCCHHHHHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHH
T ss_pred cchHHHHHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHH
Confidence 111222222221111 22222211 123566789999999999999999999999999975
No 14
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.6e-50 Score=399.66 Aligned_cols=246 Identities=22% Similarity=0.346 Sum_probs=191.6
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
++|++.+.||+|+||+||+|++. +|+.||||++..... ......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 58999999999999999999976 799999999975432 233567899999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+ +|+|.+++...+ ++++..+..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+....
T Consensus 93 Ey~-~g~L~~~l~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~ 164 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHHSC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC-----
T ss_pred eCC-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCC
Confidence 999 689999997654 399999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeeccccccccccccccccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
. ......+||+.|||||++.+..+ +.++||||+||++|||+||+.||.... ............ .
T Consensus 165 ~--~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~--------~~~~~~~i~~~~-~---- 229 (275)
T 3hyh_A 165 G--NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNISNGV-Y---- 229 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC-C----
T ss_pred C--CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCC-C----
Confidence 2 22344679999999999988876 589999999999999999999996321 112222221111 1
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. +......+.+++.+||+.||++|||++|+++
T Consensus 230 --~~----p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 230 --TL----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --CC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred --CC----CCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 11 1122356889999999999999999999987
No 15
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=6.9e-51 Score=407.78 Aligned_cols=243 Identities=25% Similarity=0.317 Sum_probs=194.3
Q ss_pred hCCCCCCccccCcCcEEEEEEeC----CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
++|++.+.||+|+||+||+|+.. +++.||||+++.... ......+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999863 478999999975432 2223467889999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
|||||+||+|.++++..+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+..
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 999999999999998754 399999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
.... ......+||+.|||||++.+..|+.++||||+||++|||+||+.||.... ..+.+....... .
T Consensus 177 ~~~~-~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~--------~~~~~~~i~~~~-~--- 243 (304)
T 3ubd_A 177 IDHE-KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD--------RKETMTMILKAK-L--- 243 (304)
T ss_dssp -----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C---
T ss_pred cCCC-ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC--------HHHHHHHHHcCC-C---
Confidence 4322 22345679999999999999999999999999999999999999996321 112222222211 1
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKM 557 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 557 (613)
. .+...+..+.+++.+||+.||++|||+
T Consensus 244 ---~----~p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 244 ---G----MPQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp ---C----CCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred ---C----CCCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 1 111233568899999999999999985
No 16
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.7e-50 Score=406.65 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=191.7
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCC--------
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-------- 358 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-------- 358 (613)
++|++.+.||+|+||+||+|++. +|+.||||+++..........+.+|+.++++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45889999999999999999976 799999999976655555667999999999999999999999987544
Q ss_pred ----ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEe
Q 007200 359 ----ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 434 (613)
Q Consensus 359 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~ 434 (613)
..++|||||++|+|.++++..... ...++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~-~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTI-EERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSG-GGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCC-ChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 368999999999999999865432 2356778899999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCc-----------eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCc
Q 007200 435 DFGLAKLMDYKDTH-----------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 503 (613)
Q Consensus 435 DfGla~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~ 503 (613)
|||+|+.+...... .....+||+.|||||++.+..|+.++|||||||++|||++ ||....
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~------ 231 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM------ 231 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH------
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc------
Confidence 99999876543221 1233569999999999999999999999999999999996 774211
Q ss_pred chHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 504 VMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.....+... .... .+ ...........+++.+||+.||++|||+.|+++
T Consensus 232 -~~~~~~~~~-~~~~--------~p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 232 -ERVRTLTDV-RNLK--------FP-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp -HHHHHHHHH-HTTC--------CC-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHHH-hcCC--------CC-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 011111111 1110 00 011223345678999999999999999999987
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.6e-47 Score=394.92 Aligned_cols=262 Identities=20% Similarity=0.291 Sum_probs=200.7
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEc------CCc
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMT------PTE 359 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 359 (613)
++|++.+.||+|+||+||+|++. +|+.||||+++..... .....+.+|+.+|+.++|||||++++++.. ...
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 57999999999999999999976 7999999999765432 234568899999999999999999998764 357
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.|+|||||. |+|.+++...+ ++++..+..++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~----~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla 205 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEeCCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeeccee
Confidence 899999995 68999987643 499999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCC---CceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh
Q 007200 440 KLMDYKD---THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 515 (613)
Q Consensus 440 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 515 (613)
+.+.... .......+||+.|||||++.+. .++.++||||+||++|||++|++||... ........+.....
T Consensus 206 ~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~-----~~~~~l~~I~~~~g 280 (398)
T 4b99_A 206 RGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK-----NYVHQLQLIMMVLG 280 (398)
T ss_dssp BCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS-----SHHHHHHHHHHHHC
T ss_pred eecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC-----CHHHHHHHHHHhcC
Confidence 8764321 2233456799999999998875 5699999999999999999999999532 11122222221111
Q ss_pred cccccc-----------cccCc-cCCCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 516 EKKLEQ-----------LVDSD-MEGNYI-----EEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 516 ~~~~~~-----------~~~~~-~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
...... ..... ...... ......+.+++.+||..||++|||+.|+++
T Consensus 281 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 281 TPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp CCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 100000 00000 000000 012356789999999999999999999887
No 18
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.2e-46 Score=386.94 Aligned_cols=196 Identities=23% Similarity=0.403 Sum_probs=169.7
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC----CCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCce
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 360 (613)
..++|++.+.||+|+||+||+|+.+ +++.||||.+.... ...++.+|++++..+ +||||+++++++.+++..
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 4578999999999999999999863 46789999986543 345678999999988 699999999999999999
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-CcEEEeccccc
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGDFGLA 439 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~DfGla 439 (613)
++||||+++|+|.++++. +++.+++.++.||+.||+|||++ ||+||||||+|||++.+ +.+||+|||+|
T Consensus 96 ~lvmE~~~g~~L~~~~~~-------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILNS-------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEECCCCCCHHHHHTT-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeCCCcccHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 999999999999999842 89999999999999999999999 99999999999999877 79999999999
Q ss_pred eecCCCCC---------------------------ceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCC
Q 007200 440 KLMDYKDT---------------------------HVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQR 491 (613)
Q Consensus 440 ~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~ 491 (613)
+....... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 86543211 112335699999999999876 48999999999999999999999
Q ss_pred Ccc
Q 007200 492 AFD 494 (613)
Q Consensus 492 p~~ 494 (613)
||.
T Consensus 246 Pf~ 248 (361)
T 4f9c_A 246 PFY 248 (361)
T ss_dssp SSS
T ss_pred CCC
Confidence 995
No 19
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.1e-45 Score=378.25 Aligned_cols=278 Identities=40% Similarity=0.670 Sum_probs=237.8
Q ss_pred HHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 283 LQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 283 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
+....++|...+.||+|+||+||+|.+.+|+.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++
T Consensus 34 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (321)
T 2qkw_B 34 LEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS-QGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL 112 (321)
T ss_dssp CCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCS-SHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred HHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccCh-HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 3345688999999999999999999988899999998876533 345678999999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+++|+|.+++.........+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 189 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKG 189 (321)
T ss_dssp EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 9999999999999977655445699999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCC-CceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 443 DYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 443 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
.... ........||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ........|.........+..
T Consensus 190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 267 (321)
T 2qkw_B 190 TELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLP--REMVNLAEWAVESHNNGQLEQ 267 (321)
T ss_dssp SSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSS--SSCCCHHHHTHHHHTTTCCCS
T ss_pred ccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCc--HHHHHHHHHhhhccccccHHH
Confidence 4322 2223344589999999999999999999999999999999999999964332 233345566666666666677
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
..++........+....+.+++.+||+.||++|||+.|+++.|+.
T Consensus 268 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 312 (321)
T 2qkw_B 268 IVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312 (321)
T ss_dssp SSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 777777667778889999999999999999999999999999975
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2.8e-45 Score=398.40 Aligned_cols=250 Identities=27% Similarity=0.338 Sum_probs=199.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHH---HHHHHhhcccCccceeeEEEEcCCce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQT---EVEMISMAVHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~---e~~~l~~l~h~niv~l~~~~~~~~~~ 360 (613)
.++|++.+.||+|+||+||+|+.. +|+.||||++.+... ......... ++.+++.++|||||++++++.+++..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 467999999999999999999977 799999999975421 112223333 45667778999999999999999999
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
|+|||||.||+|.+++...+ .+++..++.++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+
T Consensus 268 ylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~ 340 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLAC 340 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceee
Confidence 99999999999999998764 399999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 441 LMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 441 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
.+.... ....+||+.|||||++.+ ..|+.++||||+||++|||++|++||...... .............
T Consensus 341 ~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~-----~~~~i~~~i~~~~-- 410 (689)
T 3v5w_A 341 DFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-----DKHEIDRMTLTMA-- 410 (689)
T ss_dssp ECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC-----CHHHHHHHHHHCC--
T ss_pred ecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHHhhcCCC--
Confidence 765332 345679999999999975 57999999999999999999999999633211 1111111111111
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPK-----MSEVVR 562 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 562 (613)
.. .+......+.+++..||+.||++|++ ++||++
T Consensus 411 -----~~----~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 411 -----VE----LPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp -----CC----CCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred -----CC----CCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 01 11123356889999999999999998 566654
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=4e-45 Score=400.00 Aligned_cols=252 Identities=20% Similarity=0.287 Sum_probs=207.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|++.+.||+|+||+||+|.++ +|+.||+|++.... ......+.+|+.+|+.++||||+++++++.++...++|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E 234 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYE 234 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 368999999999999999999986 79999999987543 2234578899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC--CcEEEeccccceecC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE--FEAVVGDFGLAKLMD 443 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~--~~~kl~DfGla~~~~ 443 (613)
||+||+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+|+.+.
T Consensus 235 ~~~gg~L~~~i~~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~ 308 (573)
T 3uto_A 235 FMSGGELFEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD 308 (573)
T ss_dssp CCCCCBHHHHHTCTTS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred ecCCCcHHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence 9999999999865432 489999999999999999999999 99999999999999854 899999999999875
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
... .....+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ..+.+........
T Consensus 309 ~~~--~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~--------~~~~~~~i~~~~~----- 373 (573)
T 3uto_A 309 PKQ--SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN--------DDETLRNVKSCDW----- 373 (573)
T ss_dssp TTS--EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTTCC-----
T ss_pred CCC--ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--------HHHHHHHHHhCCC-----
Confidence 432 3344579999999999999999999999999999999999999996321 1122222111110
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.............+.+++.+||+.||++|||+.|+++
T Consensus 374 --~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 374 --NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp --CCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --CCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0001111122356889999999999999999999987
No 22
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=8.1e-43 Score=352.83 Aligned_cols=250 Identities=19% Similarity=0.307 Sum_probs=207.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|...+.||+|+||+||+|.+. +|+.||||++...... ....+.+|+.+++.++||||+++++++..++..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc-HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 367999999999999999999965 7899999998755433 45678899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+.+|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 98 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 98 YLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp CCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred CCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 99999999999764 289999999999999999999999 9999999999999999999999999999876543
Q ss_pred CCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccC
Q 007200 446 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 525 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (613)
.. ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ..............
T Consensus 170 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~~~~~~~~------ 234 (297)
T 3fxz_A 170 QS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN--------PLRALYLIATNGTP------ 234 (297)
T ss_dssp TC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHHCSC------
T ss_pred cc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCC------
Confidence 32 2344569999999999999999999999999999999999999995221 11111111111110
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 526 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 526 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
....+......+.+++.+||+.||++|||+.|+++
T Consensus 235 --~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 235 --ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp --CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00112223457889999999999999999999987
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=9.2e-44 Score=370.93 Aligned_cols=260 Identities=27% Similarity=0.419 Sum_probs=211.4
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC--------CCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEcC
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT--------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTP 357 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 357 (613)
.++|.+.+.||+|+||+||+|.+. ++..||||+++..........+.+|+.+++.+ +||||+++++++.++
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 467889999999999999999852 35579999998765555566799999999999 899999999999999
Q ss_pred CceEEEEecccCCcchhhhhccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 007200 358 TERLLVYPFMVNGSVASCLRERGQ------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL 425 (613)
Q Consensus 358 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll 425 (613)
...++||||+.+|+|.++++.... ....+++..+..++.||+.||+|||++ +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 999999999999999999986532 123489999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeccccceecCCCCCc-eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCc
Q 007200 426 DEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDD 503 (613)
Q Consensus 426 ~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~ 503 (613)
+.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.... .
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~-----~ 311 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-----V 311 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----G
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC-----H
Confidence 99999999999999876543221 2233447889999999999999999999999999999999 999996321 1
Q ss_pred chHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 504 VMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
......+ .... ....+......+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 312 ~~~~~~~----~~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 312 EELFKLL----KEGH---------RMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp GGHHHHH----HTTC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHH----hcCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111111 1111 0111222345789999999999999999999999999853
No 24
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-43 Score=364.08 Aligned_cols=251 Identities=22% Similarity=0.319 Sum_probs=198.7
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
..++|.+.+.||+|+||+||+|.+. +|+.||||++...........+.+|+++++.++||||+++++++.+....++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 3478999999999999999999975 799999999976654434456889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||++++++.+||+|||++.....
T Consensus 88 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD----RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999997654 389999999999999999999999 999999999999999999999999999976554
Q ss_pred CCCceeeccccccccccccccccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
..........||+.|+|||.+.+..+ +.++|||||||++|||++|+.||.... ............ .
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~-~---- 227 (347)
T 3zgw_A 161 NKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN--------VMALYKKIMRGK-Y---- 227 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC-C----
T ss_pred CCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHcCC-C----
Confidence 33333445669999999999988775 889999999999999999999996321 112222222111 0
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. +......+.+++.+||+.||++|||+.|+++
T Consensus 228 --~~----p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 228 --DV----PKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp --CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CC----CCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 01 1112356788999999999999999999987
No 25
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-42 Score=354.48 Aligned_cols=257 Identities=26% Similarity=0.410 Sum_probs=208.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|...+.||+|+||+||+|.+. +++.||+|.+... .......+.+|+++++.++||||+++++++.++...++|||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 87 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF-DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITE 87 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEE
Confidence 467888999999999999999986 6899999988543 33345678999999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+++|+|.++++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 161 (310)
T 3s95_A 88 YIKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE 161 (310)
T ss_dssp CCTTCBHHHHHHHCCT---TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred ecCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence 9999999999987432 489999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCce-------------eeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCC-cchHHHHHH
Q 007200 446 DTHV-------------TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD-DVMLLDWVK 511 (613)
Q Consensus 446 ~~~~-------------~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~-~~~~~~~~~ 511 (613)
.... .....||+.|+|||.+.+..++.++||||||+++|||++|..||......... .........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 241 (310)
T 3s95_A 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD 241 (310)
T ss_dssp ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH
T ss_pred cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc
Confidence 2211 11456999999999999999999999999999999999999998633221111 111111111
Q ss_pred HHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 512 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
.. . +......+.+++.+||+.||++|||+.++++.|+.+
T Consensus 242 ~~-------------~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l 280 (310)
T 3s95_A 242 RY-------------C----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280 (310)
T ss_dssp HT-------------C----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cc-------------C----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 10 0 111224588999999999999999999999999864
No 26
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=4.2e-44 Score=364.23 Aligned_cols=265 Identities=27% Similarity=0.417 Sum_probs=203.1
Q ss_pred CHHHHHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcC
Q 007200 279 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 357 (613)
Q Consensus 279 ~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 357 (613)
...++.+..++|++.+.||+|+||+||+|++ +|+.||||++..... ......+.+|++++++++||||+++++++.+.
T Consensus 28 ~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 106 (309)
T 3p86_A 28 DGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQP 106 (309)
T ss_dssp ----CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST
T ss_pred CcccccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 3344445567899999999999999999987 488999999876543 23345788999999999999999999999999
Q ss_pred CceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeecCCCcEEEec
Q 007200 358 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGD 435 (613)
Q Consensus 358 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~kl~D 435 (613)
...++||||+.+|+|.+++..... ...+++..+..++.|++.||+|||++ + |+||||||+||+++.++.+||+|
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~D 182 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCD 182 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECC
T ss_pred CceEEEEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECC
Confidence 999999999999999999976432 12389999999999999999999999 8 99999999999999999999999
Q ss_pred cccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh
Q 007200 436 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 515 (613)
Q Consensus 436 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 515 (613)
||+++...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ..+.......
T Consensus 183 fg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~--------~~~~~~~~~~ 253 (309)
T 3p86_A 183 FGLSRLKASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN--------PAQVVAAVGF 253 (309)
T ss_dssp CC------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSC--------HHHHHHHHHH
T ss_pred CCCCccccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHh
Confidence 99997544322 22334569999999999999999999999999999999999999996321 1111111110
Q ss_pred cccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 516 EKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
... ....+......+.+++.+||+.||++|||+.++++.|+.
T Consensus 254 ~~~---------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~ 295 (309)
T 3p86_A 254 KCK---------RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRP 295 (309)
T ss_dssp SCC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cCC---------CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 110 001112233578999999999999999999999999975
No 27
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.3e-42 Score=349.24 Aligned_cols=283 Identities=39% Similarity=0.635 Sum_probs=228.1
Q ss_pred cccccCHHHHHHHhhCCCCC------CccccCcCcEEEEEEeCCCCEEEEEEecccc---CcccHHHHHHHHHHHhhccc
Q 007200 274 QLKRFSLRELQVATDNFSNR------NILGRGGFGKVYKGRLTDGSLVAVKRLKEER---TQGGELQFQTEVEMISMAVH 344 (613)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~------~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~e~~~l~~l~h 344 (613)
....++..++..++++|... +.||+|+||.||+|.. +++.||||++.... .......+.+|+.+++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999999887 8899999999999987 58899999987543 22335678999999999999
Q ss_pred CccceeeEEEEcCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 007200 345 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANIL 424 (613)
Q Consensus 345 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIl 424 (613)
|||+++++++.+....++||||+++++|.+++..... ..++++..+..++.|++.||+|||++ +|+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999999875432 23599999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEeccccceecCCCCCc-eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCc
Q 007200 425 LDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 503 (613)
Q Consensus 425 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~ 503 (613)
++.++.+||+|||+++........ ......||+.|+|||.+.+ .++.++||||||+++|+|++|+.||......
T Consensus 166 i~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---- 240 (307)
T 2nru_A 166 LDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREP---- 240 (307)
T ss_dssp ECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSS----
T ss_pred EcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcch----
Confidence 999999999999999876543222 2334568999999998864 5789999999999999999999999743311
Q ss_pred chHHHHHHHHhhc-ccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 504 VMLLDWVKGLLKE-KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 504 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
.....+....... ..+...++... ..........+.+++..||+.||++|||+.++++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 241 QLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp SBTTHHHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1112222222221 12223333332 234566778899999999999999999999999999864
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.3e-43 Score=363.31 Aligned_cols=257 Identities=27% Similarity=0.406 Sum_probs=208.3
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC----CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
.++|.+.+.||+|+||+||+|.+. .+..||||+++..........+.+|+.+++.++||||+++++++.++...++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 467888999999999999999975 3446999999876555556789999999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+++|+|.++++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 201 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDG---QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVL 201 (325)
T ss_dssp EEECCTTCBHHHHHHTTTT---CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEEC
T ss_pred EeeCCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCccccc
Confidence 9999999999999975432 489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc--eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 443 DYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 443 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
...... ......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+..........
T Consensus 202 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~--------~~~~~~~~~~~~~- 272 (325)
T 3kul_A 202 EDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT--------NRDVISSVEEGYR- 272 (325)
T ss_dssp C----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC--------HHHHHHHHHTTCC-
T ss_pred ccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC--------HHHHHHHHHcCCC-
Confidence 543222 2222346778999999998999999999999999999999 999995221 1111111111111
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
...+......+.+++..||+.||++|||+.+|++.|+..
T Consensus 273 ---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l 311 (325)
T 3kul_A 273 ---------LPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDAL 311 (325)
T ss_dssp ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------CCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111122346789999999999999999999999999853
No 29
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.9e-43 Score=350.59 Aligned_cols=256 Identities=25% Similarity=0.411 Sum_probs=212.2
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
..++|.+.+.||+|+||.||+|.+.++..||+|+++.... ....+.+|++++..++||||+++++++.++...++|||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM--SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC--cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 3567889999999999999999998888999999976443 34678999999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+++++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 84 YISNGCLLNYLRSHGK---GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp CCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred ccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999976532 389999999999999999999999 9999999999999999999999999999876554
Q ss_pred CCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccccccccc
Q 007200 446 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 524 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (613)
.........+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... .............. ..
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~~~~~---~~ 226 (268)
T 3sxs_A 158 QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT--------NSEVVLKVSQGHRL---YR 226 (268)
T ss_dssp CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHHHHHHTTCCC---CC
T ss_pred hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC--------hHHHHHHHHcCCCC---CC
Confidence 4333444456778999999999899999999999999999999 999996322 11111111111110 00
Q ss_pred CccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 525 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 525 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
+......+.+++..||+.||++|||+.|+++.|+..
T Consensus 227 -------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (268)
T 3sxs_A 227 -------PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPL 262 (268)
T ss_dssp -------CTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred -------CCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 111235688999999999999999999999999875
No 30
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-42 Score=351.34 Aligned_cols=272 Identities=19% Similarity=0.224 Sum_probs=216.8
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCC--ceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT--ERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv 363 (613)
.++|.+.+.||+|+||+||+|.+. +|+.||||++...........+.+|+++++.++||||+++++++.... ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 357888999999999999999987 589999999987655555677889999999999999999999998765 67999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----cCCCcEEEeccccc
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFGLA 439 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~kl~DfGla 439 (613)
|||+++++|.+++...... ..+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EECCTTCBHHHHHHSGGGT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EeCCCCCCHHHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 9999999999999865332 2389999999999999999999999 99999999999999 77888999999999
Q ss_pred eecCCCCCceeeccccccccccccccc--------cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007200 440 KLMDYKDTHVTTAVRGTIGHIAPEYLS--------TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 511 (613)
Q Consensus 440 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 511 (613)
+....... .....||+.|+|||.+. +..++.++|||||||++|||++|+.||....... .....+.
T Consensus 164 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~----~~~~~~~ 237 (319)
T 4euu_A 164 RELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPR----RNKEVMY 237 (319)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGG----GCHHHHH
T ss_pred eecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccc----hhHHHHH
Confidence 87654332 23455999999999986 5778999999999999999999999996332111 1122222
Q ss_pred HHhhccc---ccccc-----------cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 007200 512 GLLKEKK---LEQLV-----------DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 568 (613)
Q Consensus 512 ~~~~~~~---~~~~~-----------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 568 (613)
....... +..+. +..............+.+++..||+.||++|||++|+++...+..
T Consensus 238 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred HHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 2222211 11100 001122345677888999999999999999999999999887644
No 31
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=6.4e-44 Score=373.31 Aligned_cols=260 Identities=25% Similarity=0.405 Sum_probs=210.4
Q ss_pred HHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 284 QVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 284 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
.+..++|.+.+.||+|+||.||+|.+. +++.||||.++..........+.+|+.+++.++||||+++++++..+...++
T Consensus 110 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 189 (377)
T 3cbl_A 110 VLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYI 189 (377)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred EEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEE
Confidence 344577888999999999999999987 7899999999765444444568899999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+++|+|.++++..+. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 190 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~ 263 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEGA---RLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREE 263 (377)
T ss_dssp EEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEcCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceec
Confidence 9999999999999976432 389999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCcee-eccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 443 DYKDTHVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 443 ~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
........ ....+++.|+|||.+.+..++.++|||||||++|||+| |+.||.... . ..+........
T Consensus 264 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~-----~----~~~~~~~~~~~-- 332 (377)
T 3cbl_A 264 ADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS-----N----QQTREFVEKGG-- 332 (377)
T ss_dssp TTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC-----H----HHHHHHHHTTC--
T ss_pred CCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----H----HHHHHHHHcCC--
Confidence 43211111 11235778999999998999999999999999999998 999995321 1 11111111111
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
....+..++..+.+++.+||+.||++|||+.++++.|+.+
T Consensus 333 -------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 333 -------RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp -------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 0111122345788999999999999999999999999753
No 32
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.7e-42 Score=355.02 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=205.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
.++|.+.+.||+|+||.||+|.+. +|+.||||++..... ......+.+|+.+++.++||||+++++++.++...++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 467999999999999999999985 799999999976543 233456889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+++|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 94 e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHG----RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp CCCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred ECCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 9999999999997654 389999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeeccccccccccccccccCCCC-CcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKSS-EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.. ......||+.|+|||.+.+..++ .++||||+||++|||++|+.||.... .............
T Consensus 167 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~~----- 231 (328)
T 3fe3_A 167 GG--KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN--------LKELRERVLRGKY----- 231 (328)
T ss_dssp SC--GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCC-----
T ss_pred CC--ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCC-----
Confidence 32 23445699999999999888764 79999999999999999999996322 1122222221111
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. +......+.+++.+||..||++|||++|+++
T Consensus 232 --~~----p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 232 --RI----PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp --CC----CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred --CC----CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01 1112356889999999999999999999987
No 33
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.9e-43 Score=352.25 Aligned_cols=255 Identities=25% Similarity=0.411 Sum_probs=210.2
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
..++|...+.||+|+||+||+|.+.+++.||+|++..... ....+.+|++++++++||||+++++++.++...++|||
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc--CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 3467888999999999999999998889999999976543 34678999999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+++++|.++++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~~~L~~~l~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 159 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 159 (269)
T ss_dssp CCTTCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred eCCCCcHHHHHHhcCc---ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc
Confidence 9999999999976432 489999999999999999999999 9999999999999999999999999999865433
Q ss_pred CCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccccccccc
Q 007200 446 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 524 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (613)
.........+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+..........
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~--------~~~~~~~~~~~~~------ 225 (269)
T 4hcu_A 160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDISTGFR------ 225 (269)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTTCC------
T ss_pred ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC--------HHHHHHHHhcCcc------
Confidence 2222333447788999999999999999999999999999999 999996321 1111212111110
Q ss_pred CccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 525 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 525 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
.. .+......+.+++..||+.||++|||+.++++.|+.
T Consensus 226 ~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~ 263 (269)
T 4hcu_A 226 LY----KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 263 (269)
T ss_dssp CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC----CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHH
Confidence 00 111123568999999999999999999999999975
No 34
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.2e-43 Score=368.33 Aligned_cols=257 Identities=29% Similarity=0.434 Sum_probs=199.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC----CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
.++|.+.+.||+|+||.||+|++. ++..||||+++..........+.+|+.++++++||||+++++++.++...++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 467999999999999999999865 4778999999876555556679999999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+++|+|.++++... ..+++..+..++.||++||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 124 v~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 999999999999997643 2489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCce--eeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 443 DYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 443 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
....... .....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.... ..+..........
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~--------~~~~~~~i~~~~~- 268 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS--------NQDVIKAVDEGYR- 268 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC--------HHHHHHHHHTTEE-
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCC-
Confidence 5432211 122235778999999999999999999999999999998 999995221 1111111111111
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
..........+.+++..||+.||++||++.+|++.|+..
T Consensus 269 ---------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 269 ---------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp ---------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 011122346789999999999999999999999999764
No 35
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=6.8e-43 Score=352.92 Aligned_cols=260 Identities=23% Similarity=0.332 Sum_probs=205.5
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc--ccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|.+.+.||+|+||.||+|.+. +++.||+|.+...... .....+.+|+.++..++||||+++++++.+++..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 467999999999999999999976 6899999998654332 2345789999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+++++|.+++...+ ++++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 162 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALS 162 (294)
T ss_dssp EECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-
T ss_pred EeCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccc
Confidence 99999999999998754 389999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
...........||+.|+|||.+.+..++.++||||||+++|||++|+.||.... ............... .
T Consensus 163 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--------~~~~~~~~~~~~~~~-~- 232 (294)
T 4eqm_A 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET--------AVSIAIKHIQDSVPN-V- 232 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC--------HHHHHHHHHSSCCCC-H-
T ss_pred cccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHhhccCCC-c-
Confidence 443333444569999999999999999999999999999999999999996322 111111111111100 0
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhcC
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-KMSEVVRMLEGD 567 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~~ 567 (613)
... .....+..+.+++.+|++.||++|| ++.++.+.|+..
T Consensus 233 ~~~----~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~ 273 (294)
T 4eqm_A 233 TTD----VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSV 273 (294)
T ss_dssp HHH----SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTS
T ss_pred chh----cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHH
Confidence 000 1112236789999999999999999 899999998764
No 36
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8.4e-42 Score=349.29 Aligned_cols=262 Identities=21% Similarity=0.291 Sum_probs=211.6
Q ss_pred cccCHHHHHHHhhC----------CCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhccc
Q 007200 276 KRFSLRELQVATDN----------FSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH 344 (613)
Q Consensus 276 ~~~~~~~~~~~~~~----------~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h 344 (613)
..++.+++..+++. |...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|+.+++.++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CSHHHHHHHHHHHTTCCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch-hHHHHHHHHHHHHHhCCC
Confidence 34677777766654 566678999999999999987 799999999875433 345678899999999999
Q ss_pred CccceeeEEEEcCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 007200 345 RNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANIL 424 (613)
Q Consensus 345 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIl 424 (613)
|||+++++++......++||||+++++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 99999999999999999999999999999998643 389999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcc
Q 007200 425 LDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 504 (613)
Q Consensus 425 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~ 504 (613)
++.++.+||+|||+++....... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.... .
T Consensus 174 l~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~-----~- 246 (321)
T 2c30_A 174 LTLDGRVKLSDFGFCAQISKDVP-KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS-----P- 246 (321)
T ss_dssp ECTTCCEEECCCTTCEECCSSSC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----H-
T ss_pred ECCCCcEEEeeeeeeeecccCcc-ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----H-
Confidence 99999999999999987654322 2334569999999999999999999999999999999999999995321 1
Q ss_pred hHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 505 MLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
.+.+....... .... .........+.+++.+||+.||++|||+.|+++.
T Consensus 247 --~~~~~~~~~~~-~~~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 247 --VQAMKRLRDSP-PPKL-------KNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp --HHHHHHHHHSS-CCCC-------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred --HHHHHHHhcCC-CCCc-------CccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11111111111 0000 0111223568899999999999999999999873
No 37
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1.6e-43 Score=368.01 Aligned_cols=269 Identities=27% Similarity=0.411 Sum_probs=215.7
Q ss_pred cCHHHHHHHhhCCCCCCccccCcCcEEEEEEeC------CCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCcccee
Q 007200 278 FSLRELQVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRL 350 (613)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 350 (613)
+...++++..++|.+.+.||+|+||.||+|.+. +++.||||+++..........+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 456677788899999999999999999999732 46789999998765555566799999999999 79999999
Q ss_pred eEEEEcCCc-eEEEEecccCCcchhhhhccCCC-----------------------------------------------
Q 007200 351 RGFCMTPTE-RLLVYPFMVNGSVASCLRERGQS----------------------------------------------- 382 (613)
Q Consensus 351 ~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~----------------------------------------------- 382 (613)
++++.++.. .++||||+.+|+|.++++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987654 89999999999999999765321
Q ss_pred ---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCCCC
Q 007200 383 ---------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT 447 (613)
Q Consensus 383 ---------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~ 447 (613)
...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 12289999999999999999999999 999999999999999999999999999986643322
Q ss_pred -ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccccccccC
Q 007200 448 -HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 525 (613)
Q Consensus 448 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (613)
.......||+.|+|||.+.+..++.++|||||||++|||+| |+.||..... ..... .........
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~----~~~~~~~~~----- 315 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----DEEFC----RRLKEGTRM----- 315 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC----SHHHH----HHHHHTCCC-----
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch----hHHHH----HHHHcCCCC-----
Confidence 23344568899999999999999999999999999999998 9999963221 11111 111111110
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 526 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 526 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
. .+......+.+++..||+.||++|||+.|+++.|+.
T Consensus 316 ~----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 352 (359)
T 3vhe_A 316 R----APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 352 (359)
T ss_dssp C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred C----CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHH
Confidence 0 111123568899999999999999999999999975
No 38
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=7.1e-43 Score=357.47 Aligned_cols=253 Identities=22% Similarity=0.346 Sum_probs=202.4
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEec
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 366 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 366 (613)
++|.+.+.||+|+||+||+|.+. +++.||||++...........+.+|+.+++.++||||+++++++.++...++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 67889999999999999999977 78999999997654444445688999999999999999999999999999999999
Q ss_pred ccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCCC
Q 007200 367 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 446 (613)
Q Consensus 367 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 446 (613)
+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 87 ~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 159 (323)
T 3tki_A 87 CSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (323)
T ss_dssp CTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred CCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCC
Confidence 99999999997543 389999999999999999999999 99999999999999999999999999998664322
Q ss_pred C-ceeeccccccccccccccccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccccc
Q 007200 447 T-HVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 524 (613)
Q Consensus 447 ~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (613)
. .......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||..... .......+.. .... .
T Consensus 160 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~~~~~~~~~----~~~~---~- 228 (323)
T 3tki_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD---SCQEYSDWKE----KKTY---L- 228 (323)
T ss_dssp EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT---TSHHHHHHHT----TCTT---S-
T ss_pred cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch---HHHHHHHHhc----cccc---C-
Confidence 1 22334569999999999988775 7889999999999999999999963321 1111111111 1000 0
Q ss_pred CccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 525 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 525 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
.........+.+++.+||+.||++|||+.|+++.
T Consensus 229 -----~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 229 -----NPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp -----TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -----CccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0011223567899999999999999999999763
No 39
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=7.9e-43 Score=377.66 Aligned_cols=261 Identities=27% Similarity=0.404 Sum_probs=214.1
Q ss_pred HHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 284 QVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 284 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
++..++|.+.+.||+|+||.||+|.+. ++..||||.++.... ....+.+|+.++++++||||+++++++......++
T Consensus 216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~l 293 (495)
T 1opk_A 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 293 (495)
T ss_dssp BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc--chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEE
Confidence 344567888999999999999999987 488999999976433 35679999999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+.+|+|.++++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 294 v~E~~~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~ 368 (495)
T 1opk_A 294 ITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLM 368 (495)
T ss_dssp EEECCTTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECC
T ss_pred EEEccCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceec
Confidence 9999999999999986432 3489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
............++..|+|||.+.+..++.++|||||||++|||+| |+.||.... .......+. ..
T Consensus 369 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~-----~~~~~~~~~----~~---- 435 (495)
T 1opk_A 369 TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLE----KD---- 435 (495)
T ss_dssp TTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHH----TT----
T ss_pred cCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHH----cC----
Confidence 5433222333446789999999999999999999999999999999 999996322 111111111 11
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCc
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 569 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 569 (613)
.....+..+...+.+++.+||+.||++|||+.+|++.|+..-.
T Consensus 436 -----~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 436 -----YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred -----CCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1111122334678999999999999999999999999997643
No 40
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3e-43 Score=353.09 Aligned_cols=257 Identities=22% Similarity=0.350 Sum_probs=197.7
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeCC----CCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCce
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 360 (613)
+..++|++.+.||+|+||.||+|.+.. +..||+|.++..........+.+|+.+++.++||||+++++++ .++..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCcc
Confidence 345788899999999999999998753 4579999987655555566789999999999999999999997 45678
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
++||||+.+++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 164 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 164 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC-----
T ss_pred EEEEecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECcccccc
Confidence 99999999999999997653 2489999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 441 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 441 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
..............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... .......+ ......
T Consensus 165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~-----~~~~~~~i---~~~~~~ 236 (281)
T 1mp8_A 165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK-----NNDVIGRI---ENGERL 236 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHH---HTTCCC
T ss_pred ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCC-----HHHHHHHH---HcCCCC
Confidence 765443333334447789999999999999999999999999999997 999996322 11112211 111110
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
..+......+.+++.+||+.||++|||+.|+++.|+.
T Consensus 237 ----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 273 (281)
T 1mp8_A 237 ----------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 273 (281)
T ss_dssp ----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ----------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 1112234678899999999999999999999999975
No 41
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.8e-43 Score=358.06 Aligned_cols=262 Identities=27% Similarity=0.404 Sum_probs=212.6
Q ss_pred HHHhhCCCCCCccccCcCcEEEEEEeC------CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcC
Q 007200 284 QVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 357 (613)
Q Consensus 284 ~~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 357 (613)
....++|.+.+.||+|+||.||+|.+. +++.||||+++..........+.+|+.+++.++||||+++++++.++
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 98 (314)
T 2ivs_A 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQD 98 (314)
T ss_dssp BCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS
T ss_pred ccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecC
Confidence 344578899999999999999999862 45789999998665555566789999999999999999999999999
Q ss_pred CceEEEEecccCCcchhhhhccCC--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 007200 358 TERLLVYPFMVNGSVASCLRERGQ--------------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRD 417 (613)
Q Consensus 358 ~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 417 (613)
...++||||+.+|+|.+++..... ....+++..+..++.||++||+|||++ +|+|||
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~d 175 (314)
T 2ivs_A 99 GPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRD 175 (314)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCC
T ss_pred CceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccc
Confidence 999999999999999999986543 123489999999999999999999999 999999
Q ss_pred CCCCceeecCCCcEEEeccccceecCCCCCce-eeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCccc
Q 007200 418 VKAANILLDEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDL 495 (613)
Q Consensus 418 lk~~NIll~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~ 495 (613)
|||+||+++.++.+||+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..
T Consensus 176 ikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 255 (314)
T 2ivs_A 176 LAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255 (314)
T ss_dssp CSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred cchheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999999998765433222 223447788999999999999999999999999999999 9999963
Q ss_pred ccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 496 ARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
.. .......+. .... ..........+.+++.+||+.||++|||+.++++.|+.
T Consensus 256 ~~-----~~~~~~~~~----~~~~---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~ 308 (314)
T 2ivs_A 256 IP-----PERLFNLLK----TGHR---------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEK 308 (314)
T ss_dssp CC-----GGGHHHHHH----TTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC-----HHHHHHHhh----cCCc---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 22 111111111 1110 01112234678999999999999999999999999975
No 42
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.9e-43 Score=365.87 Aligned_cols=259 Identities=27% Similarity=0.403 Sum_probs=209.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC------CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 360 (613)
.++|.+.+.||+|+||+||+|.+. +++.||||+++..........+.+|+.+++.++||||+++++++.++...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 467888999999999999999843 46689999997665555566789999999999999999999999999999
Q ss_pred EEEEecccCCcchhhhhccCC---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC---cEEEe
Q 007200 361 LLVYPFMVNGSVASCLRERGQ---SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF---EAVVG 434 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~ 434 (613)
++||||+.+|+|.++++.... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 999999999999999986542 223589999999999999999999999 999999999999999554 59999
Q ss_pred ccccceecCCCC-CceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHH
Q 007200 435 DFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKG 512 (613)
Q Consensus 435 DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 512 (613)
|||+++...... ........||+.|+|||.+.+..++.++|||||||++|||++ |+.||.... . .+....
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~-----~---~~~~~~ 298 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----N---QEVLEF 298 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----H---HHHHHH
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----H---HHHHHH
Confidence 999997553221 122233457899999999999999999999999999999998 999995321 1 111111
Q ss_pred HhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 513 LLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
....... ..+......+.+++..||+.||++|||+.+|++.|+.
T Consensus 299 i~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 299 VTSGGRM----------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHcCCCC----------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 1111111 1112233568899999999999999999999999975
No 43
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=6.2e-43 Score=351.10 Aligned_cols=256 Identities=21% Similarity=0.358 Sum_probs=207.3
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
+..++|...+.||+|+||+||+|.+.++..||+|+++.... ....+.+|++++..++||||+++++++.++...++||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 98 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT 98 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC--CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence 34578888999999999999999998888999999976543 3467899999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+.+++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 99 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 172 (283)
T 3gen_A 99 EYMANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD 172 (283)
T ss_dssp CCCTTCBHHHHHHCGGG---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCC
T ss_pred eccCCCcHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccccccccc
Confidence 99999999999976332 389999999999999999999999 999999999999999999999999999986643
Q ss_pred CCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
..........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||.... .............
T Consensus 173 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~--------~~~~~~~~~~~~~----- 239 (283)
T 3gen_A 173 DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT--------NSETAEHIAQGLR----- 239 (283)
T ss_dssp HHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC--------HHHHHHHHHTTCC-----
T ss_pred cccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC--------hhHHHHHHhcccC-----
Confidence 32222333446788999999999999999999999999999998 999996322 1111111111110
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
.. .+......+.+++.+||+.||++|||+.++++.|++
T Consensus 240 -~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 277 (283)
T 3gen_A 240 -LY----RPHLASEKVYTIMYSCWHEKADERPTFKILLSNILD 277 (283)
T ss_dssp -CC----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred -CC----CCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHH
Confidence 00 111123578899999999999999999999999975
No 44
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.4e-42 Score=349.78 Aligned_cols=263 Identities=24% Similarity=0.317 Sum_probs=201.5
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcc-cHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|.+.+.||+|+||+||+|++.+|+.||+|++....... ....+.+|+++++.++||||+++++++.++...++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46799999999999999999999889999999997554332 24568899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+.+ +|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 100 ~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 100 FMEK-DLKKVLDENK---TGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp CCSE-EHHHHHHTCT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred CCCC-CHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9985 7887776543 2489999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc---
Q 007200 446 DTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ--- 521 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 521 (613)
.. ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .......+...........
T Consensus 173 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~ 246 (311)
T 3niz_A 173 VR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT-----DDDQLPKIFSILGTPNPREWPQ 246 (311)
T ss_dssp CC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----TTTHHHHHHHHHCCCCTTTSGG
T ss_pred cc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHHCCCChHHhhh
Confidence 22 2333458999999999876 568999999999999999999999996322 1112222222221111000
Q ss_pred ccc------Cc---cCCC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 522 LVD------SD---MEGN----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 522 ~~~------~~---~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
..+ .. .... ........+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 247 VQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp GTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000 00 0000 01112356889999999999999999999987
No 45
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=364.75 Aligned_cols=261 Identities=28% Similarity=0.411 Sum_probs=212.5
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC--------CCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEc
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT--------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMT 356 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 356 (613)
..++|.+.+.||+|+||+||+|++. .+..||||+++..........+.+|+++++++ +||||+++++++.+
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 3467888999999999999999853 23579999998766555567799999999999 89999999999999
Q ss_pred CCceEEEEecccCCcchhhhhccCC------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 007200 357 PTERLLVYPFMVNGSVASCLRERGQ------------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANIL 424 (613)
Q Consensus 357 ~~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIl 424 (613)
+...++||||+.+|+|.+++..... ....+++..+..++.||+.||+|||++ +|+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 9999999999999999999986542 123599999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEeccccceecCCCCC-ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCC
Q 007200 425 LDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDD 502 (613)
Q Consensus 425 l~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~ 502 (613)
++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~----- 298 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----- 298 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-----
Confidence 99999999999999986654322 22333457889999999999999999999999999999999 999995221
Q ss_pred cchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 503 DVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
..+........... . .+......+.+++..||+.||++|||+.||++.|+.+
T Consensus 299 ---~~~~~~~~~~~~~~------~----~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 299 ---VEELFKLLKEGHRM------D----KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp ---HHHHHHHHHTTCCC------C----CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ---HHHHHHHHHcCCCC------C----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 11222111111111 0 1112335789999999999999999999999999753
No 46
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-43 Score=362.44 Aligned_cols=265 Identities=26% Similarity=0.444 Sum_probs=214.1
Q ss_pred HHHHHhhCCCCCCccccCcCcEEEEEEeC------CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEE
Q 007200 282 ELQVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 355 (613)
Q Consensus 282 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 355 (613)
.+....++|.+.+.||+|+||.||+|++. +++.||||+++..........+.+|+.+++.++||||+++++++.
T Consensus 41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 34455688999999999999999999975 347899999987655555667999999999999999999999999
Q ss_pred cCCceEEEEecccCCcchhhhhccCCC--------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 007200 356 TPTERLLVYPFMVNGSVASCLRERGQS--------------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIH 415 (613)
Q Consensus 356 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH 415 (613)
++...++||||+++|+|.+++...... ..++++..++.++.||++||+|||++ +|+|
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH 197 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 999999999999999999999764321 14699999999999999999999999 9999
Q ss_pred cCCCCCceeecCCCcEEEeccccceecCCCCC-ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCc
Q 007200 416 RDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAF 493 (613)
Q Consensus 416 ~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~ 493 (613)
|||||+||+++.++.+||+|||+++....... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||
T Consensus 198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 99999999999999999999999976543221 12233457889999999999999999999999999999999 99999
Q ss_pred ccccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 494 DLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
.... ..+.... ........ .+......+.+++..||+.||++|||+.++++.|++.
T Consensus 278 ~~~~--------~~~~~~~-~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~ 333 (343)
T 1luf_A 278 YGMA--------HEEVIYY-VRDGNILA---------CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRM 333 (343)
T ss_dssp TTSC--------HHHHHHH-HHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred CCCC--------hHHHHHH-HhCCCcCC---------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHH
Confidence 5221 1111111 11111111 1112335789999999999999999999999999875
No 47
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=6.3e-42 Score=358.32 Aligned_cols=274 Identities=23% Similarity=0.309 Sum_probs=209.4
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc--cHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG--GELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 361 (613)
..++|++.+.||+|+||+||+|+.. +++.||+|++++..... ....+..|..++.++ +||||+++++++.++...+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 3467999999999999999999977 57899999997654322 223577899998876 8999999999999999999
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
+||||+.+|+|..++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 130 lV~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~ 202 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 202 (396)
T ss_dssp EEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeee
Confidence 9999999999999998654 389999999999999999999999 999999999999999999999999999985
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 442 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 442 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
.... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||................+..........
T Consensus 203 ~~~~-~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~- 280 (396)
T 4dc2_A 203 GLRP-GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR- 280 (396)
T ss_dssp CCCT-TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC-
T ss_pred cccC-CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC-
Confidence 3322 22344567999999999999999999999999999999999999999643222111111122222222111110
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHH---HHHHHhhcCCc-chhhHHHh
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMS---EVVRMLEGDGL-AERWEEWQ 577 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~---evl~~L~~~~~-~~~~~~~~ 577 (613)
.+......+.+++..||+.||++||++. .+.+.++...+ .-+|+...
T Consensus 281 ---------~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~ 331 (396)
T 4dc2_A 281 ---------IPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMME 331 (396)
T ss_dssp ---------CCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHH
T ss_pred ---------CCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHH
Confidence 1112335688999999999999999962 33444443333 22355443
No 48
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=2e-43 Score=378.71 Aligned_cols=260 Identities=23% Similarity=0.418 Sum_probs=211.9
Q ss_pred HHHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 282 ELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 282 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
++++..++|.+.+.||+|+||+||+|.+.++..||||+++... .....+.+|+.+++.++||||+++++++. ....+
T Consensus 182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~ 258 (454)
T 1qcf_A 182 AWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIY 258 (454)
T ss_dssp CSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCE
T ss_pred ceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccE
Confidence 3455667899999999999999999999888899999997643 24668999999999999999999999986 56789
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
+||||+.+|+|.++++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 259 lv~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~ 333 (454)
T 1qcf_A 259 IITEFMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARV 333 (454)
T ss_dssp EEECCCTTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGG
T ss_pred EEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceE
Confidence 99999999999999975421 1378999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 442 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 442 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
.............++..|+|||.+....++.++|||||||++|||+| |+.||.... ..+...........
T Consensus 334 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--------~~~~~~~i~~~~~~- 404 (454)
T 1qcf_A 334 IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--------NPEVIRALERGYRM- 404 (454)
T ss_dssp BCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--------HHHHHHHHHHTCCC-
T ss_pred cCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCCC-
Confidence 64322222233346788999999999999999999999999999999 999995221 11212121111111
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
..+..++..+.+++.+||+.||++|||+.+|++.|++.
T Consensus 405 ---------~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~ 442 (454)
T 1qcf_A 405 ---------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442 (454)
T ss_dssp ---------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence 11122346789999999999999999999999999875
No 49
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.8e-42 Score=354.61 Aligned_cols=269 Identities=27% Similarity=0.314 Sum_probs=206.5
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCc----eE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE----RL 361 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----~~ 361 (613)
..++|.+.+.||+|+||+||+|++. ++.||||++.... .....+..|+.++..++||||+++++++..... .+
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 4568999999999999999999986 8899999996543 233456678889999999999999999987543 69
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-------CCCeEecCCCCCceeecCCCcEEEe
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC-------DPKIIHRDVKAANILLDEEFEAVVG 434 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-------~~~ivH~Dlk~~NIll~~~~~~kl~ 434 (613)
+||||+++|+|.++++.. ++++..+..++.|++.||+|||+.+ .++|+||||||+|||++.++.+||+
T Consensus 99 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~ 173 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA 173 (322)
T ss_dssp EEEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC
T ss_pred EEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc
Confidence 999999999999999764 2899999999999999999999862 3389999999999999999999999
Q ss_pred ccccceecCCCCCc-eeeccccccccccccccccC-----CCCCcccchhHHHHHHHHHhCCCCcccccccCCCc-----
Q 007200 435 DFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTG-----KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD----- 503 (613)
Q Consensus 435 DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~----- 503 (613)
|||+++........ ......||+.|+|||.+.+. .++.++|||||||++|||+||+.||..........
T Consensus 174 DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~ 253 (322)
T 3soc_A 174 DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEI 253 (322)
T ss_dssp CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHH
T ss_pred cCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhh
Confidence 99999876543322 23335699999999999763 45678899999999999999999996432111100
Q ss_pred ---chHHHHHHHHhhcccccccccCccCCC-CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 504 ---VMLLDWVKGLLKEKKLEQLVDSDMEGN-YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 504 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
.....+..... .... .+..... ........+.+++.+||+.||++|||+.||++.|+.+
T Consensus 254 ~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 316 (322)
T 3soc_A 254 GQHPSLEDMQEVVV-HKKK----RPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316 (322)
T ss_dssp CSSCCHHHHHHHHT-TSCC----CCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCchhhhhhhhh-cccC----CCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 01111111111 1111 1111110 1124556799999999999999999999999999853
No 50
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.1e-42 Score=357.38 Aligned_cols=252 Identities=22% Similarity=0.303 Sum_probs=205.6
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc-----cHHHHHHHHHHHhhcccCccceeeEEEEcCCce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-----GELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 360 (613)
.++|.+.+.||+|+||+||+|... +|+.||+|+++...... ....+.+|+.++..++||||+++++++.++...
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 467899999999999999999987 68999999997654321 356789999999999999999999999999999
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC----cEEEecc
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF----EAVVGDF 436 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~Df 436 (613)
++||||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999997543 499999999999999999999999 999999999999998877 7999999
Q ss_pred ccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhc
Q 007200 437 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 516 (613)
Q Consensus 437 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 516 (613)
|+++...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... ..+........
T Consensus 164 G~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~--------~~~~~~~i~~~ 233 (361)
T 2yab_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANITAV 233 (361)
T ss_dssp SSCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTT
T ss_pred CCceEcCCCC--ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhc
Confidence 9998765422 2334569999999999999999999999999999999999999995321 11111111111
Q ss_pred ccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 517 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. . .++. ........+.+++..||..||++|||+.|+++
T Consensus 234 ~~-~--~~~~----~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 234 SY-D--FDEE----FFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CC-C--CCHH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CC-C--CCch----hccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 0 0000 00112356889999999999999999999886
No 51
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.4e-42 Score=348.80 Aligned_cols=260 Identities=23% Similarity=0.354 Sum_probs=201.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhh--cccCccceeeEEEEcC----Cce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM--AVHRNLLRLRGFCMTP----TER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~~~ 360 (613)
.++|.+.+.||+|+||+||+|++ +|+.||||++... ....+..|.+++.. ++||||+++++++... ...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 46899999999999999999998 5899999998643 23455667776665 7899999999987543 457
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCceeecCCCcEE
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH--------DHCDPKIIHRDVKAANILLDEEFEAV 432 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~~k 432 (613)
++||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+|
T Consensus 82 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred EEehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence 8999999999999999643 3899999999999999999999 77 999999999999999999999
Q ss_pred EeccccceecCCCCCce---eeccccccccccccccccC------CCCCcccchhHHHHHHHHHhC----------CCCc
Q 007200 433 VGDFGLAKLMDYKDTHV---TTAVRGTIGHIAPEYLSTG------KSSEKTDVFGYGVMLLELITG----------QRAF 493 (613)
Q Consensus 433 l~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DVwS~G~il~elltg----------~~p~ 493 (613)
|+|||+++......... .....||+.|+|||.+.+. .++.++|||||||++|||+|| +.||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 99999998765443322 2234699999999999876 455799999999999999999 7777
Q ss_pred ccccccCCCcchHHHHHHHHhhcccccccccCccC-CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 494 DLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDME-GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
........ .. ..+......... .+... ..........+.+++..||+.||++|||+.||++.|+.+
T Consensus 234 ~~~~~~~~---~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 234 YDVVPNDP---SF-EDMRKVVCVDQQ----RPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTSCSSC---CH-HHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCCc---ch-hhhhHHHhccCC----CCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 43221111 11 111111111110 11111 112335678899999999999999999999999999853
No 52
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.4e-41 Score=349.24 Aligned_cols=250 Identities=23% Similarity=0.295 Sum_probs=206.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|+..+.||+|+||+||+|+.. +|+.||+|+++... .......+.+|+.+++.++||||+++++++.+....++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467889999999999999999976 69999999997542 223455788999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 156 (337)
T 1o6l_A 84 MEYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 156 (337)
T ss_dssp EECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSC
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcc
Confidence 99999999999997654 389999999999999999999999 99999999999999999999999999998543
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............ .
T Consensus 157 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~-~---- 222 (337)
T 1o6l_A 157 SDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HERLFELILMEE-I---- 222 (337)
T ss_dssp CTT-CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C----
T ss_pred cCC-CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC--------HHHHHHHHHcCC-C----
Confidence 222 22344669999999999999999999999999999999999999995321 111111111111 0
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVRM 563 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 563 (613)
. .+......+.+++.+||+.||++|| +++|+++.
T Consensus 223 --~----~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 223 --R----FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp --C----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --C----CCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 0 1112235788999999999999999 89988764
No 53
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=9e-43 Score=357.57 Aligned_cols=256 Identities=25% Similarity=0.406 Sum_probs=200.3
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCC----EEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
.++|+..+.||+|+||+||+|++. +++ +||+|.++..........+.+|+.++++++||||+++++++.++. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 367888999999999999999965 444 368888876555556678999999999999999999999998754 78
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
+++||+.+|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTT---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred EEEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 99999999999999987543 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc-eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 442 MDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 442 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
....... ......+|+.|+|||.+.+..++.++|||||||++|||+| |+.||.... .......+. ...
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~~~~----~~~- 236 (327)
T 3poz_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILE----KGE- 236 (327)
T ss_dssp HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHH----TTC-
T ss_pred ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCC-----HHHHHHHHH----cCC-
Confidence 6543322 2233446889999999999999999999999999999999 999996322 111111111 110
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
....+......+.+++.+||+.||++|||+.++++.|+..
T Consensus 237 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 237 --------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp --------CCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred --------CCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1111122345789999999999999999999999999864
No 54
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.3e-42 Score=353.84 Aligned_cols=252 Identities=22% Similarity=0.347 Sum_probs=202.3
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCc------
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE------ 359 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------ 359 (613)
.++|++.+.||+|+||.||+|++. +|+.||||+++..........+.+|+.++++++||||+++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 367889999999999999999987 7999999999866555556789999999999999999999999865432
Q ss_pred ---------------------------------------------------eEEEEecccCCcchhhhhccCCCCCCCCH
Q 007200 360 ---------------------------------------------------RLLVYPFMVNGSVASCLRERGQSQPPLNW 388 (613)
Q Consensus 360 ---------------------------------------------------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~ 388 (613)
.++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 7999999999999999987543 234677
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCCCC-----------ceeecccccc
Q 007200 389 SVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDT-----------HVTTAVRGTI 457 (613)
Q Consensus 389 ~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~-----------~~~~~~~gt~ 457 (613)
..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....... .......||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 88999999999999999999 999999999999999999999999999987754321 1223346999
Q ss_pred ccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHH
Q 007200 458 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVE 537 (613)
Q Consensus 458 ~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 537 (613)
.|+|||.+.+..++.++|||||||++|||++|..|+.... ...... ..... .........
T Consensus 241 ~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~----------~~~~~~-~~~~~---------~~~~~~~~~ 300 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV----------RIITDV-RNLKF---------PLLFTQKYP 300 (332)
T ss_dssp GGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH----------HHHHHH-HTTCC---------CHHHHHHCH
T ss_pred CccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH----------HHHHHh-hccCC---------CcccccCCh
Confidence 9999999999999999999999999999999988763111 111111 11100 011223345
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 538 QLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 538 ~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.+.+++.+||+.||++|||+.|+++
T Consensus 301 ~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 301 QEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred hHHHHHHHHccCCCCcCCCHHHHhh
Confidence 6789999999999999999999987
No 55
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=6.2e-42 Score=360.32 Aligned_cols=261 Identities=21% Similarity=0.293 Sum_probs=210.0
Q ss_pred HHHHHHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEc
Q 007200 280 LRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMT 356 (613)
Q Consensus 280 ~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 356 (613)
+.++....++|++.+.||+|+||+||+|++. +++.||+|+++.... ......+.+|+.+++.++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455566789999999999999999999987 688999999965321 1122347889999999999999999999999
Q ss_pred CCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecc
Q 007200 357 PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 436 (613)
Q Consensus 357 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 436 (613)
+...++||||+++|+|.++++.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 99999999999999999999754 289999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCceeeccccccccccccccccCC----CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHH
Q 007200 437 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK----SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 512 (613)
Q Consensus 437 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 512 (613)
|+++..............||+.|+|||++.+.. ++.++|||||||++|||++|+.||.... .......
T Consensus 213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~--------~~~~~~~ 284 (410)
T 3v8s_A 213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS--------LVGTYSK 284 (410)
T ss_dssp TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHH
T ss_pred ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC--------hhhHHHH
Confidence 999877654433444667999999999998765 7899999999999999999999996321 1122222
Q ss_pred HhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 007200 513 LLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPME--RPKMSEVVRM 563 (613)
Q Consensus 513 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 563 (613)
............ .......+.+++..|+..+|.+ ||+++||++.
T Consensus 285 i~~~~~~~~~p~-------~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 285 IMNHKNSLTFPD-------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HHTHHHHCCCCT-------TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred HHhccccccCCC-------cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 221110000000 0112356889999999999988 9999999874
No 56
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.4e-42 Score=348.53 Aligned_cols=250 Identities=24% Similarity=0.361 Sum_probs=196.5
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-------------------------ccHHHHHHHHHHHh
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-------------------------GGELQFQTEVEMIS 340 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-------------------------~~~~~~~~e~~~l~ 340 (613)
.++|.+.+.||+|+||.||+|.+. +++.||||++...... .....+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 467899999999999999999976 6889999998654321 11245889999999
Q ss_pred hcccCccceeeEEEEc--CCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 007200 341 MAVHRNLLRLRGFCMT--PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDV 418 (613)
Q Consensus 341 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dl 418 (613)
.++||||+++++++.+ ....++||||+++++|.+++.. .++++..+..++.|++.||+|||++ +|+||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dl 163 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDI 163 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCC
Confidence 9999999999999986 5678999999999999987643 2489999999999999999999999 9999999
Q ss_pred CCCceeecCCCcEEEeccccceecCCCCCceeeccccccccccccccccCC---CCCcccchhHHHHHHHHHhCCCCccc
Q 007200 419 KAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK---SSEKTDVFGYGVMLLELITGQRAFDL 495 (613)
Q Consensus 419 k~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DVwS~G~il~elltg~~p~~~ 495 (613)
||+||+++.++.+||+|||+++....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 242 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMD 242 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999987654332 233456999999999997765 37889999999999999999999953
Q ss_pred ccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 496 ARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. ......... ..... . + . .......+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~--------~~~~~~~~~-~~~~~-~--~-~----~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 243 ER--------IMCLHSKIK-SQALE-F--P-D----QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SS--------HHHHHHHHH-HCCCC-C--C-S----SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cc--------HHHHHHHHh-cccCC-C--C-C----ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 21 111111111 11110 0 0 0 1112356899999999999999999999976
No 57
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=9.1e-42 Score=348.49 Aligned_cols=266 Identities=24% Similarity=0.361 Sum_probs=192.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|+..+.||+|+||+||+|... +|+.||+|+++..........+.+|+.+++.++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467899999999999999999976 6899999999765544445678899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 366 FMVNGSVASCLRERG--QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|+. |+|.+++.... .....+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999886532 2223589999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc---cc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK---KL 519 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 519 (613)
.... ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||.... .......+....... ..
T Consensus 160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~ 233 (317)
T 2pmi_A 160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN-----DEEQLKLIFDIMGTPNESLW 233 (317)
T ss_dssp SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCSCCTTTC
T ss_pred CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCChhHh
Confidence 3322 22334589999999999764 68999999999999999999999996321 111122221111100 00
Q ss_pred ccc-----ccCccC----C--------CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 520 EQL-----VDSDME----G--------NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 520 ~~~-----~~~~~~----~--------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... ..+... . .........+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 000 000000 0 000112357899999999999999999999886
No 58
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.2e-42 Score=358.11 Aligned_cols=256 Identities=23% Similarity=0.302 Sum_probs=205.8
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc----CcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER----TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
.++|++.+.||+|+||+||+|.+. +|+.||||++.... .......+.+|+.+++.++||||+++++++.++...+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 467899999999999999999976 68999999986432 1123567899999999999999999999999999999
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc---EEEecccc
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGL 438 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~DfGl 438 (613)
+||||+++++|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999988865443344589999999999999999999999 9999999999999987654 99999999
Q ss_pred ceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccc
Q 007200 439 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 518 (613)
Q Consensus 439 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (613)
++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............
T Consensus 180 a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---------~~~~~~i~~~~~ 249 (351)
T 3c0i_A 180 AIQLGESG-LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---------ERLFEGIIKGKY 249 (351)
T ss_dssp CEECCTTS-CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---------HHHHHHHHHTCC
T ss_pred eeEecCCC-eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---------HHHHHHHHcCCC
Confidence 98765432 22334569999999999999999999999999999999999999996321 111111111110
Q ss_pred ccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 519 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. ..+.. .......+.+++.+||+.||++|||+.|+++
T Consensus 250 -~--~~~~~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 250 -K--MNPRQ----WSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -C--CCHHH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -C--CCccc----cccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 00000 0112357889999999999999999999986
No 59
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=6.5e-43 Score=351.85 Aligned_cols=260 Identities=28% Similarity=0.416 Sum_probs=214.9
Q ss_pred HHHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 283 LQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 283 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
+++..++|.+.+.||+|+||.||+|.+. ++..||+|.+..... ....+.+|+.+++.++||||+++++++.++...+
T Consensus 8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (288)
T 3kfa_A 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY 85 (288)
T ss_dssp TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST--HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH--HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEE
Confidence 3445678999999999999999999987 488899999975432 3567889999999999999999999999999999
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
+||||+.+++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 86 ~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~ 160 (288)
T 3kfa_A 86 IITEFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRL 160 (288)
T ss_dssp EEEECCTTEEHHHHHHHCCT--TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred EEEEcCCCCcHHHHHHhccc--CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCcccee
Confidence 99999999999999976433 3489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 442 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 442 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
.............+++.|+|||.+.+..++.++||||||+++|+|++ |..||.... .......+.. .
T Consensus 161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~-----~~~~~~~~~~---~---- 228 (288)
T 3kfa_A 161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEK---D---- 228 (288)
T ss_dssp SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGHHHHHHT---T----
T ss_pred ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhc---c----
Confidence 76554444455557889999999999999999999999999999999 999996322 1111111111 1
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
.....+......+.+++..|++.||++|||+.++++.|+..
T Consensus 229 ------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 229 ------YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp ------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ------CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 01111122346789999999999999999999999999753
No 60
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.1e-42 Score=354.44 Aligned_cols=263 Identities=26% Similarity=0.406 Sum_probs=213.0
Q ss_pred HHHhhCCCCCCccccCcCcEEEEEEe------CCCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEc
Q 007200 284 QVATDNFSNRNILGRGGFGKVYKGRL------TDGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMT 356 (613)
Q Consensus 284 ~~~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 356 (613)
+...++|...+.||+|+||+||+|.+ .+++.||||+++..........+.+|+.++.++ +||||+++++++..
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 98 (313)
T 1t46_A 19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI 98 (313)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence 34457899999999999999999985 246789999998665554566799999999999 89999999999999
Q ss_pred CCceEEEEecccCCcchhhhhccCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 007200 357 PTERLLVYPFMVNGSVASCLRERGQS--------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAAN 422 (613)
Q Consensus 357 ~~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~N 422 (613)
+...++||||+++|+|.+++...... ..++++..+..++.|++.||+|||++ +|+||||||+|
T Consensus 99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N 175 (313)
T 1t46_A 99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 175 (313)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccce
Confidence 99999999999999999999765421 23589999999999999999999999 99999999999
Q ss_pred eeecCCCcEEEeccccceecCCCCCc-eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccC
Q 007200 423 ILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLAN 500 (613)
Q Consensus 423 Ill~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~ 500 (613)
|+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--- 252 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP--- 252 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC---
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCccc---
Confidence 99999999999999999876543322 2233457889999999999999999999999999999999 999996322
Q ss_pred CCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 501 DDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
........ ..... .. .........+.+++.+||+.||++|||+.|+++.|+.
T Consensus 253 -~~~~~~~~----~~~~~-----~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 253 -VDSKFYKM----IKEGF-----RM----LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp -SSHHHHHH----HHHTC-----CC----CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred -chhHHHHH----hccCC-----CC----CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 11111111 11110 00 0111223578999999999999999999999999975
No 61
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.7e-43 Score=358.73 Aligned_cols=256 Identities=25% Similarity=0.397 Sum_probs=201.5
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCE----EEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSL----VAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
++|...+.||+|+||+||+|.+. +++. ||+|.+...........+.+|+.+++.++||||+++++++. +...++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 56888899999999999999975 4443 78888765443333445778999999999999999999886 567899
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+.+|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 92 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHR---GALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEECCTTCBSHHHHHSSG---GGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEeCCCCCHHHHHHHcc---ccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 999999999999997642 2488999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCc-eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 443 DYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 443 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
...... ......|+..|+|||.+.+..++.++|||||||++|||+| |+.||.... .......+. ......
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~---~~~~~~ 237 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR-----LAEVPDLLE---KGERLA 237 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----TTHHHHHHH---TTCBCC
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC-----HHHHHHHHH---cCCCCC
Confidence 543322 2334557889999999999999999999999999999999 999996322 111111111 111100
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 568 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 568 (613)
.+......+.+++.+||+.||++|||+.++++.|+...
T Consensus 238 ----------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 238 ----------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA 275 (325)
T ss_dssp ----------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred ----------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 01112235788999999999999999999999998653
No 62
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-42 Score=359.50 Aligned_cols=265 Identities=24% Similarity=0.375 Sum_probs=210.1
Q ss_pred HHHHhhCCCCCCccccCcCcEEEEEEeC------CCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEE
Q 007200 283 LQVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM 355 (613)
Q Consensus 283 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 355 (613)
+++..++|.+.+.||+|+||.||+|.+. ++..||||+++..........+.+|+.++.++ .||||+++++++.
T Consensus 40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 119 (344)
T 1rjb_A 40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT 119 (344)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence 4456688999999999999999999962 45689999998654444456789999999999 8999999999999
Q ss_pred cCCceEEEEecccCCcchhhhhccCCC-------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 007200 356 TPTERLLVYPFMVNGSVASCLRERGQS-------------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHR 416 (613)
Q Consensus 356 ~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~ 416 (613)
.++..++||||+++|+|.+++...... ...+++..+..++.||+.||+|||++ +|+||
T Consensus 120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~ 196 (344)
T 1rjb_A 120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHR 196 (344)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEET
T ss_pred eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 999999999999999999999765321 12489999999999999999999999 99999
Q ss_pred CCCCCceeecCCCcEEEeccccceecCCCCCc-eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcc
Q 007200 417 DVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFD 494 (613)
Q Consensus 417 Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~ 494 (613)
||||+||+++.++.+||+|||++......... ......||+.|+|||.+.+..++.++||||||+++|||+| |+.||.
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999999866543322 2334457889999999999999999999999999999998 999996
Q ss_pred cccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 495 LARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
... ....... ...... ....+......+.+++..||+.||++|||+.++++.|+..
T Consensus 277 ~~~----~~~~~~~----~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 332 (344)
T 1rjb_A 277 GIP----VDANFYK----LIQNGF---------KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332 (344)
T ss_dssp TCC----CSHHHHH----HHHTTC---------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCC----cHHHHHH----HHhcCC---------CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 322 1111111 111110 0011112246789999999999999999999999999864
No 63
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-42 Score=351.61 Aligned_cols=251 Identities=20% Similarity=0.248 Sum_probs=205.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|.+.+.||+|+||+||+|.+. +++.||+|.+.... .....+.+|+.+++.++||||+++++++.+....++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 367889999999999999999977 68899999986432 234568899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC--CCcEEEeccccceecC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE--EFEAVVGDFGLAKLMD 443 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~kl~DfGla~~~~ 443 (613)
|+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++...
T Consensus 82 ~~~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~ 155 (321)
T 1tki_A 82 FISGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK 155 (321)
T ss_dssp CCCCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred eCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence 999999999997543 2489999999999999999999999 9999999999999997 7899999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
... ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||.... ..+.+..........
T Consensus 156 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~~--- 222 (321)
T 1tki_A 156 PGD--NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET--------NQQIIENIMNAEYTF--- 222 (321)
T ss_dssp TTC--EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCCC---
T ss_pred CCC--ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC--------HHHHHHHHHcCCCCC---
Confidence 432 2344569999999999998889999999999999999999999996321 112222221111100
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... ........+.+++.+||..||++|||+.|+++
T Consensus 223 ~~~----~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 223 DEE----AFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp CHH----HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred Chh----hhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000 00112357889999999999999999999988
No 64
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.9e-42 Score=352.17 Aligned_cols=253 Identities=25% Similarity=0.326 Sum_probs=201.3
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc--ccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 362 (613)
.++|+..+.||+|+||.||+|+.. +++.||+|+++..... .....+.+|..++.++ +||||+++++++.+....++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 357888999999999999999986 6889999999765432 2344678899999887 89999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 88 v~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 999999999999997654 389999999999999999999999 9999999999999999999999999999854
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||................+..........
T Consensus 161 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~-- 237 (345)
T 3a8x_A 161 LRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR-- 237 (345)
T ss_dssp CCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC--
T ss_pred cCCC-CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC--
Confidence 3222 2234457999999999999999999999999999999999999999643221111111112222211111110
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCH
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKM 557 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~ 557 (613)
.+......+.+++.+||+.||++||++
T Consensus 238 --------~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 --------IPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp --------CCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred --------CCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111233578899999999999999996
No 65
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=8.6e-43 Score=358.67 Aligned_cols=265 Identities=25% Similarity=0.390 Sum_probs=212.7
Q ss_pred HHHHHhhCCCCCCccccCcCcEEEEEEeCC-C-----CEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEE
Q 007200 282 ELQVATDNFSNRNILGRGGFGKVYKGRLTD-G-----SLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFC 354 (613)
Q Consensus 282 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 354 (613)
+++...++|...+.||+|+||.||+|.+.. + ..||+|.+...........+.+|+.++..+ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 455667889999999999999999999752 2 479999998766555566799999999999 899999999999
Q ss_pred EcCCceEEEEecccCCcchhhhhccCC----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCcee
Q 007200 355 MTPTERLLVYPFMVNGSVASCLRERGQ----------SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANIL 424 (613)
Q Consensus 355 ~~~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIl 424 (613)
.++...++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 999999999999999999999875321 123489999999999999999999999 9999999999999
Q ss_pred ecCCCcEEEeccccceecCCCCCc-eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCC
Q 007200 425 LDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDD 502 (613)
Q Consensus 425 l~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~ 502 (613)
++.++.+||+|||+++........ ......+|+.|+|||.+.+..++.++||||||+++|||+| |..||.... .
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~----~ 272 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGIL----V 272 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC----S
T ss_pred ECCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccc----h
Confidence 999999999999999866433222 2333457889999999999999999999999999999999 999996321 1
Q ss_pred cchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 503 DVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
...... ....... . ..+......+.+++..||+.||++|||+.|+++.|+.
T Consensus 273 ~~~~~~----~~~~~~~-----~----~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~ 323 (333)
T 2i1m_A 273 NSKFYK----LVKDGYQ-----M----AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323 (333)
T ss_dssp SHHHHH----HHHHTCC-----C----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred hHHHHH----HHhcCCC-----C----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHH
Confidence 111111 1111110 0 0011123578999999999999999999999999975
No 66
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.1e-41 Score=343.07 Aligned_cols=262 Identities=23% Similarity=0.334 Sum_probs=199.7
Q ss_pred hCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEec
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 366 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 366 (613)
++|.+.+.||+|+||+||+|...+|+.||+|++...... .....+.+|+.+++.++||||+++++++.++...++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 468889999999999999999988999999999754322 2345688999999999999999999999999999999999
Q ss_pred ccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCCC
Q 007200 367 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 446 (613)
Q Consensus 367 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 446 (613)
+.+ +|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCE---GGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV 154 (288)
T ss_dssp CSE-EHHHHHHTST---TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC--
T ss_pred cCC-CHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc
Confidence 975 8988887543 2489999999999999999999999 99999999999999999999999999998654322
Q ss_pred CceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccc---ccc-
Q 007200 447 THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK---LEQ- 521 (613)
Q Consensus 447 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~- 521 (613)
. ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||.... .......+........ ...
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T 1ob3_A 155 R-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS-----EADQLMRIFRILGTPNSKNWPNV 228 (288)
T ss_dssp --------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCTTTSTTG
T ss_pred c-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHHCCCChhhchhh
Confidence 2 22334589999999999764 58999999999999999999999996321 1111111111111000 000
Q ss_pred ----cccCccC-------CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 522 ----LVDSDME-------GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 522 ----~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
..++... ..........+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 229 TELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp GGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000 0011123467889999999999999999999987
No 67
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=345.57 Aligned_cols=253 Identities=23% Similarity=0.322 Sum_probs=205.6
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-----ccHHHHHHHHHHHhhcccCccceeeEEEEcCCce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-----GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 360 (613)
.++|.+.+.||+|+||.||+|... +|+.||+|++...... .....+.+|+.+++.++||||+++++++.++...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 456889999999999999999986 6899999999754322 1356789999999999999999999999999999
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC----cEEEecc
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF----EAVVGDF 436 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~Df 436 (613)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+||
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 99999999999999997543 489999999999999999999999 999999999999999887 7999999
Q ss_pred ccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhc
Q 007200 437 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 516 (613)
Q Consensus 437 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 516 (613)
|+++...... ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||.... ..+.+......
T Consensus 163 g~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~~~~~ 232 (326)
T 2y0a_A 163 GLAHKIDFGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANVSAV 232 (326)
T ss_dssp TTCEECCTTS--CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHHT
T ss_pred CCCeECCCCC--ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC--------HHHHHHHHHhc
Confidence 9998765332 2234569999999999998999999999999999999999999995221 11111111111
Q ss_pred ccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 517 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
.. .............+.+++..||+.||++|||+.|+++.
T Consensus 233 ~~-------~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 233 NY-------EFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CC-------CCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CC-------CcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00 00000001123568899999999999999999999873
No 68
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.2e-42 Score=343.58 Aligned_cols=254 Identities=29% Similarity=0.462 Sum_probs=194.6
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCc---ccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQ---GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|+..+.||+|+||.||+|.+. |+.||||+++..... .....+.+|+++++.++||||+++++++.++...++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467888999999999999999986 889999998754322 2345788999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC--------CCcEEEec
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE--------EFEAVVGD 435 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~--------~~~~kl~D 435 (613)
|||+++++|.+++... .+++..+..++.|++.||+|||++...+|+||||||+||+++. ++.+||+|
T Consensus 85 ~e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 9999999999998643 3899999999999999999999992112999999999999986 67899999
Q ss_pred cccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh
Q 007200 436 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 515 (613)
Q Consensus 436 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 515 (613)
||+++...... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... . .........
T Consensus 160 fg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~---~~~~~~~~~ 228 (271)
T 3dtc_A 160 FGLAREWHRTT---KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID-----G---LAVAYGVAM 228 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-----H---HHHHHHHHT
T ss_pred CCccccccccc---ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----H---HHHHHhhhc
Confidence 99998654322 223458999999999999999999999999999999999999996321 0 111111111
Q ss_pred cccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 516 EKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
.. .....+......+.+++.+||+.||++|||+.|+++.|+.
T Consensus 229 ~~---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 229 NK---------LALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTT 270 (271)
T ss_dssp SC---------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC
T ss_pred CC---------CCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhc
Confidence 11 1111122234678999999999999999999999999975
No 69
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=7.3e-42 Score=353.63 Aligned_cols=251 Identities=28% Similarity=0.368 Sum_probs=200.2
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCce
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 360 (613)
...++|++.+.||+|+||+||+|+.. +|+.||||+++... .......+..|..++..+ +||||+++++++.++...
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 44578999999999999999999976 68999999997542 222345678899999987 699999999999999999
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
++||||+.+|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~ 172 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK 172 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccccee
Confidence 99999999999999997754 389999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 441 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 441 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
..... .......+||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+..........
T Consensus 173 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~~-- 241 (353)
T 3txo_A 173 EGICN-GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN--------EDDLFEAILNDEV-- 241 (353)
T ss_dssp CSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCC--
T ss_pred ecccC-CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCCC--
Confidence 54322 223345679999999999999899999999999999999999999996322 1122222222111
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCH------HHHHH
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKM------SEVVR 562 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~evl~ 562 (613)
.++......+.+++.+||+.||++||++ .|+++
T Consensus 242 ---------~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 242 ---------VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp ---------CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ---------CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 0111223568899999999999999998 66665
No 70
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=360.58 Aligned_cols=255 Identities=17% Similarity=0.244 Sum_probs=205.3
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
..++|.+.+.||+|+||+||+|... +|+.||+|++...... .....+.+|+.+++.++||||+++++++.++...++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 4567999999999999999999976 7899999999765432 2345688999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec---CCCcEEEeccccce
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD---EEFEAVVGDFGLAK 440 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~kl~DfGla~ 440 (613)
|||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ +++.+||+|||+++
T Consensus 89 ~E~~~gg~L~~~i~~~~----~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~ 161 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161 (444)
T ss_dssp ECCCBCCBHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCB
T ss_pred EEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeE
Confidence 99999999999997654 389999999999999999999999 999999999999998 56789999999998
Q ss_pred ecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 441 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 441 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
....... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... . ......... ....
T Consensus 162 ~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~-----~---~~~~~~i~~-~~~~ 231 (444)
T 3soa_A 162 EVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED-----Q---HRLYQQIKA-GAYD 231 (444)
T ss_dssp CCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS-----H---HHHHHHHHH-TCCC
T ss_pred EecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc-----H---HHHHHHHHh-CCCC
Confidence 7654322 2334569999999999999999999999999999999999999995221 1 111111111 1110
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
. ...........+.+++.+||+.||++|||+.|+++.
T Consensus 232 -~-----~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 -F-----PSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp -C-----CTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -C-----CccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 0 001111223578899999999999999999999873
No 71
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.7e-41 Score=341.48 Aligned_cols=260 Identities=26% Similarity=0.412 Sum_probs=200.8
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
+..++|.+.+.||+|+||+||+|.+. ..+|+|+++.... ......+.+|+++++.++||||+++++++. .+..++|
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv 109 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIV 109 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEE
Confidence 44578999999999999999999875 3589998875433 233457899999999999999999999865 5568999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+.+++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||+++...
T Consensus 110 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 110 TQWCEGSSLYKHLHVQET---KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EECCSSCBHHHHHHTSCC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EecCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 999999999999975432 489999999999999999999999 99999999999999999999999999998654
Q ss_pred CC-CCceeeccccccccccccccc---cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 444 YK-DTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 444 ~~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
.. .........||+.|+|||.+. +..++.++|||||||++|||++|+.||.... .. +.+.........
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~-----~~---~~~~~~~~~~~~ 255 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-----NR---DQIIFMVGRGYA 255 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CH---HHHHHHHHHTCC
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCC-----cH---HHHHHHHhcCCC
Confidence 32 222233456999999999986 5678899999999999999999999996321 11 111111111111
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
. +.. ......+...+.+++..||+.||++|||+.|+++.|+.
T Consensus 256 ~----~~~-~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~ 297 (307)
T 3lb7_A 256 S----PDL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp C----CCS-TTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred C----cch-hhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence 1 100 01111234678999999999999999999999999875
No 72
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.9e-42 Score=349.74 Aligned_cols=265 Identities=25% Similarity=0.406 Sum_probs=204.2
Q ss_pred HhhCCCCCCccccCcCcEEEEEEe-----CCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcC--C
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--T 358 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 358 (613)
..++|++.+.||+|+||+||+|++ .+++.||||++.... ......+.+|+.+++.++||||+++++++... .
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 346788999999999999999984 268899999987543 33445789999999999999999999998653 5
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccc
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 438 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 438 (613)
..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred ceEEEEEeCCCCCHHHHHHhccc---ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 68999999999999999976532 389999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCC--ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCccccccc------C-CCcchHHHH
Q 007200 439 AKLMDYKDT--HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA------N-DDDVMLLDW 509 (613)
Q Consensus 439 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~------~-~~~~~~~~~ 509 (613)
++....... .......++..|+|||.+.+..++.++||||||+++|||+||..|+...... . .........
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (295)
T 3ugc_A 161 TKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFH 240 (295)
T ss_dssp CC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred cccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHH
Confidence 987653322 1222344777899999999999999999999999999999999998633210 0 001111111
Q ss_pred HHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 510 VKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
+....... .....+......+.+++.+||+.||++|||+.|+++.|+.
T Consensus 241 ~~~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~ 288 (295)
T 3ugc_A 241 LIELLKNN---------GRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 288 (295)
T ss_dssp HHHHHHTT---------CCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHhcc---------CcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 11111111 1111122334679999999999999999999999999975
No 73
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=5.5e-41 Score=350.01 Aligned_cols=251 Identities=23% Similarity=0.332 Sum_probs=203.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|.+.+.||+|+||.||+|... +++.||+|++.... .......+.+|+.++..++||||+++++++.+....++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 367889999999999999999976 68899999987543 223456788999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 94 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp ECCCTTEEHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 99999999999997643 389999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeecccccccccccccccc---CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... .............. .
T Consensus 167 ~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~-----~~~~~~~~~~~~~~-~- 237 (384)
T 4fr4_A 167 RE--TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSS-----TSSKEIVHTFETTV-V- 237 (384)
T ss_dssp TT--CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTT-----SCHHHHHHHHHHCC-C-
T ss_pred CC--CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCC-----ccHHHHHHHHhhcc-c-
Confidence 33 22345669999999999974 4589999999999999999999999963221 11112111111110 0
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPK-MSEVVR 562 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~ 562 (613)
..+......+.+++..||+.||++||+ +.++++
T Consensus 238 ---------~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 ---------TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ---------CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ---------CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 011223457899999999999999998 666654
No 74
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=6.6e-42 Score=366.28 Aligned_cols=251 Identities=27% Similarity=0.411 Sum_probs=205.4
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCC-ceEEE
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-ERLLV 363 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv 363 (613)
+..++|.+.+.||+|+||.||+|.+. |+.||||+++... ....+.+|+.++++++||||+++++++.+.. ..++|
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv 265 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIV 265 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEE
Confidence 44567888999999999999999986 7899999997653 3457899999999999999999999987765 78999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+.+|+|.++++..+. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 266 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 340 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEAS 340 (450)
T ss_dssp EECCTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccc
Confidence 999999999999987543 2378999999999999999999999 99999999999999999999999999998543
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
... ....+++.|+|||.+.+..++.++|||||||++|||+| |+.||..... ......+ .....
T Consensus 341 ~~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-----~~~~~~i---~~~~~---- 404 (450)
T 1k9a_A 341 STQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRV---EKGYK---- 404 (450)
T ss_dssp ----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-----TTHHHHH---HTTCC----
T ss_pred ccc----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHH---HcCCC----
Confidence 221 12247889999999999999999999999999999998 9999963221 1111111 11111
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
...+..++..+.+++..||+.||++|||+.++++.|+.
T Consensus 405 ------~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~ 442 (450)
T 1k9a_A 405 ------MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442 (450)
T ss_dssp ------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 11122334678999999999999999999999999975
No 75
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2e-42 Score=370.52 Aligned_cols=257 Identities=26% Similarity=0.392 Sum_probs=204.3
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
+..++|.+.+.||+|+||.||+|.+.++..||||+++.... ....+.+|+.++++++||||+++++++.+ ...++||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~ 257 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 257 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEE
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEe
Confidence 44567888899999999999999998778899999976442 35679999999999999999999999876 6789999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+.+|+|.++++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 258 e~~~~gsL~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 332 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 332 (452)
T ss_dssp CCCTTCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC----
T ss_pred hhhcCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCC
Confidence 99999999999975321 2389999999999999999999999 999999999999999999999999999987654
Q ss_pred CCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
..........++..|+|||.+.+..++.++|||||||++|||++ |+.||.... ..+..........
T Consensus 333 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~--------~~~~~~~i~~~~~----- 399 (452)
T 1fmk_A 333 NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NREVLDQVERGYR----- 399 (452)
T ss_dssp ----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHHHHHHTTCC-----
T ss_pred CceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCC-----
Confidence 33223334457889999999999999999999999999999999 999995221 1111212111111
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
...+..++..+.+++.+||+.||++|||+.++++.|+..
T Consensus 400 -----~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~ 438 (452)
T 1fmk_A 400 -----MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 438 (452)
T ss_dssp -----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTT
T ss_pred -----CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 111223346789999999999999999999999999864
No 76
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3e-41 Score=340.48 Aligned_cols=263 Identities=20% Similarity=0.288 Sum_probs=201.3
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc-cHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
++|++.+.||+|+||+||+|.+. +|+.||||++....... ....+.+|+.+++.++||||+++++++.++...++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 47888999999999999999986 68999999997654332 34578899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+.+ ++.+.+.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIP 154 (292)
T ss_dssp CCSE-EHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSC
T ss_pred cCCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCc
Confidence 9976 5555554432 2499999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCceeeccccccccccccccccCC-CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccc---ccc
Q 007200 446 DTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK---LEQ 521 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 521 (613)
.. ......||+.|+|||.+.+.. ++.++|||||||++|||++|..||.... ........+........ ...
T Consensus 155 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~----~~~~~~~~i~~~~~~~~~~~~~~ 229 (292)
T 3o0g_A 155 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGN----DVDDQLKRIFRLLGTPTEEQWPS 229 (292)
T ss_dssp CS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCS----SHHHHHHHHHHHHCCCCTTTCTT
T ss_pred cc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCC----CHHHHHHHHHHHhCCCChhhhhh
Confidence 22 233455899999999998766 7999999999999999999988863211 11111121111111100 000
Q ss_pred ccc------------CccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 522 LVD------------SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 522 ~~~------------~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... ..............+.+++.+|++.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 000 00000111233467889999999999999999999987
No 77
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.2e-42 Score=368.60 Aligned_cols=265 Identities=19% Similarity=0.266 Sum_probs=210.9
Q ss_pred CHHHHHHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc--ccHHHHHHHHHHHhhcccCccceeeEEEE
Q 007200 279 SLRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCM 355 (613)
Q Consensus 279 ~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 355 (613)
.+.++....++|++.+.||+|+||+||+|++. +++.||+|+++..... .....+.+|..++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34556667789999999999999999999987 5789999999753211 11224788999999999999999999999
Q ss_pred cCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEec
Q 007200 356 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 435 (613)
Q Consensus 356 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~D 435 (613)
++...++||||+.+|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~---~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFE---DRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence 9999999999999999999997642 2499999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCceeeccccccccccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007200 436 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 510 (613)
Q Consensus 436 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 510 (613)
||+++..............||+.|+|||++. ...++.++|||||||++|||++|+.||.... ..+..
T Consensus 219 FGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~--------~~~~~ 290 (437)
T 4aw2_A 219 FGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAES--------LVETY 290 (437)
T ss_dssp CTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHH
T ss_pred hhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC--------hhHHH
Confidence 9999877654444445567999999999997 4568999999999999999999999996321 11111
Q ss_pred HHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 007200 511 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPME--RPKMSEVVRM 563 (613)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 563 (613)
........... -+... ......+.+++.+|+..+|++ ||+++|+++.
T Consensus 291 ~~i~~~~~~~~--~p~~~----~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 291 GKIMNHKERFQ--FPTQV----TDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHHHTHHHHCC--CCSSC----CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred Hhhhhcccccc--CCccc----ccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 12211110000 01000 112356888999999888888 9999999873
No 78
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.6e-41 Score=341.50 Aligned_cols=253 Identities=31% Similarity=0.540 Sum_probs=201.9
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccH------HHHHHHHHHHhhcccCccceeeEEEEcCCc
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGE------LQFQTEVEMISMAVHRNLLRLRGFCMTPTE 359 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~------~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 359 (613)
.++|+..+.||+|+||+||+|++. +++.||+|++......... ..+.+|+.+++.++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 367888999999999999999975 7899999998754433221 56889999999999999999999986554
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeecCCCc-----EE
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK--IIHRDVKAANILLDEEFE-----AV 432 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~-----~k 432 (613)
++||||+++|+|.+++.... .++++..+..++.|++.||+|||++ + |+||||||+||+++.++. +|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKA---HPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred -eEEEEecCCCCHHHHHhccc---CCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 79999999999999886543 2499999999999999999999999 8 999999999999988776 99
Q ss_pred EeccccceecCCCCCceeeccccccccccccccc--cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007200 433 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS--TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 510 (613)
Q Consensus 433 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 510 (613)
|+|||+++.... ......||+.|+|||.+. ...++.++|||||||++|||++|+.||..... ......
T Consensus 170 l~Dfg~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~------~~~~~~ 239 (287)
T 4f0f_A 170 VADFGLSQQSVH----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSY------GKIKFI 239 (287)
T ss_dssp ECCCTTCBCCSS----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCC------CHHHHH
T ss_pred eCCCCccccccc----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccc------cHHHHH
Confidence 999999974332 234456999999999984 45578899999999999999999999963221 111111
Q ss_pred HHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 511 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
........ ....+......+.+++..||+.||++|||+.|+++.|+.
T Consensus 240 ~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 240 NMIREEGL---------RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp HHHHHSCC---------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHhccCC---------CCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 11111111 111122234678999999999999999999999999975
No 79
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.9e-42 Score=346.79 Aligned_cols=258 Identities=27% Similarity=0.443 Sum_probs=209.4
Q ss_pred HHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 283 LQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 283 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
+++..++|.+.+.||+|+||.||+|...++..||+|.++.... ....+.+|+++++.++||||+++++++. .+..++
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~ 84 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI 84 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc--cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEE
Confidence 3445578899999999999999999988888999999975432 3567899999999999999999999876 456899
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+.+++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||++...
T Consensus 85 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 159 (279)
T 1qpc_A 85 ITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI 159 (279)
T ss_dssp EEECCTTCBHHHHTTSHHH--HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEecCCCCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence 9999999999999975321 1389999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
............++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+..........
T Consensus 160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--------~~~~~~~~~~~~~--- 228 (279)
T 1qpc_A 160 EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT--------NPEVIQNLERGYR--- 228 (279)
T ss_dssp SSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC--------HHHHHHHHHTTCC---
T ss_pred cCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC--------HHHHHHHHhcccC---
Confidence 5443333334457789999999998889999999999999999999 999995221 1111111111110
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
.. .+......+.+++..|++.||++|||+.++++.|++
T Consensus 229 ---~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 266 (279)
T 1qpc_A 229 ---MV----RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (279)
T ss_dssp ---CC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---CC----CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 00 111223578999999999999999999999999975
No 80
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=5.9e-41 Score=342.01 Aligned_cols=246 Identities=26% Similarity=0.344 Sum_probs=204.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|.+.+.||+|+||+||+|+.. +|+.||+|+++.... ......+.+|..+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 367888999999999999999976 799999999975431 22355678899999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 85 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~ 157 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVP 157 (318)
T ss_dssp ECCCCSCBHHHHHHHTS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECS
T ss_pred EeCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecC
Confidence 99999999999998643 389999999999999999999999 99999999999999999999999999998754
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... .............
T Consensus 158 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~--------~~~~~~~i~~~~~----- 220 (318)
T 1fot_A 158 DV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN--------TMKTYEKILNAEL----- 220 (318)
T ss_dssp SC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHCCC-----
T ss_pred Cc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCC-----
Confidence 32 234569999999999999999999999999999999999999995321 1122222222110
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 562 (613)
. .+......+.+++.+|+..||++|| +++++++
T Consensus 221 --~----~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 221 --R----FPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp --C----CCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred --C----CCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 0 1112235788999999999999999 8888875
No 81
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.2e-42 Score=342.70 Aligned_cols=255 Identities=25% Similarity=0.401 Sum_probs=209.5
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
..++|...+.||+|+||.||+|.+.+++.||+|++..... ....+.+|+++++.++||||+++++++.++...++|||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 3467888999999999999999998888999999976543 34678999999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+++++|.+++..... .+++..+..++.|++.||+|||++ +++||||||+||+++.++.+||+|||++......
T Consensus 84 ~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 84 FMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp CCTTCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred CCCCCcHHHHHhhCcc---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 9999999999976532 489999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccccccccc
Q 007200 446 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 524 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (613)
.........++..|+|||.+.+..++.++||||||+++|||++ |+.||.... .............
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~i~~~~~------ 223 (267)
T 3t9t_A 158 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS--------NSEVVEDISTGFR------ 223 (267)
T ss_dssp HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTTCC------
T ss_pred cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC--------HHHHHHHHhcCCc------
Confidence 2222233447788999999998999999999999999999999 899996321 1122222111111
Q ss_pred CccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 525 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 525 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
.. .+......+.+++.+||+.||++|||+.++++.|+.
T Consensus 224 ~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~ 261 (267)
T 3t9t_A 224 LY----KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAE 261 (267)
T ss_dssp CC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CC----CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 00 011123578899999999999999999999999975
No 82
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.5e-42 Score=351.78 Aligned_cols=260 Identities=25% Similarity=0.362 Sum_probs=207.3
Q ss_pred CCCCCccccCcCcEEEEEEeC-----CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcC--CceEE
Q 007200 290 FSNRNILGRGGFGKVYKGRLT-----DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLL 362 (613)
Q Consensus 290 ~~~~~~ig~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 362 (613)
|.+.+.||+|+||+||++.+. +++.||||+++..........+.+|+++++.++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488899999999999988643 57889999998765555566799999999999999999999999874 66799
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+++|+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~~~L~~~l~~~~-----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 184 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 184 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEecccCCcHHHHHhhCC-----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCccccccc
Confidence 999999999999997643 89999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCc--eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCccccccc------CCCcchHHHHHHHHh
Q 007200 443 DYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA------NDDDVMLLDWVKGLL 514 (613)
Q Consensus 443 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~------~~~~~~~~~~~~~~~ 514 (613)
...... ......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ..........+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--- 261 (318)
T 3lxp_A 185 PEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLT--- 261 (318)
T ss_dssp CTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHH---
T ss_pred cccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHH---
Confidence 544322 223345788899999999999999999999999999999999999643210 000000001111
Q ss_pred hcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 515 KEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
+..........+......+.+++.+||+.||++|||+.|+++.|+.
T Consensus 262 ------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 307 (318)
T 3lxp_A 262 ------ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKT 307 (318)
T ss_dssp ------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ------HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 1111111112223344679999999999999999999999999975
No 83
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8e-42 Score=351.64 Aligned_cols=262 Identities=27% Similarity=0.428 Sum_probs=211.2
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeC--------CCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEE
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLT--------DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCM 355 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 355 (613)
+..++|.+.+.||+|+||.||+|.+. ++..||||+++..........+.+|+++++++ +||||+++++++.
T Consensus 32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 111 (334)
T 2pvf_A 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 111 (334)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred CCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc
Confidence 34578999999999999999999863 46789999998765555566789999999999 8999999999999
Q ss_pred cCCceEEEEecccCCcchhhhhccCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 007200 356 TPTERLLVYPFMVNGSVASCLRERGQS------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANI 423 (613)
Q Consensus 356 ~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NI 423 (613)
++...++||||+.+|+|.+++...... ...+++..+..++.||+.||+|||++ +|+||||||+||
T Consensus 112 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NI 188 (334)
T 2pvf_A 112 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNV 188 (334)
T ss_dssp SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceE
Confidence 999999999999999999999765421 22489999999999999999999999 999999999999
Q ss_pred eecCCCcEEEeccccceecCCCCCc-eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCC
Q 007200 424 LLDEEFEAVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLAND 501 (613)
Q Consensus 424 ll~~~~~~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~ 501 (613)
+++.++.+||+|||+++........ ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 189 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~---- 264 (334)
T 2pvf_A 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP---- 264 (334)
T ss_dssp EECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC----
T ss_pred EEcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC----
Confidence 9999999999999999876543322 1223347789999999998889999999999999999999 999995321
Q ss_pred CcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 502 DDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
..+........... . .+......+.+++.+||+.||++|||+.|+++.|+.+
T Consensus 265 ----~~~~~~~~~~~~~~------~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 265 ----VEELFKLLKEGHRM------D----KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp ----HHHHHHHHHHTCCC------C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----HHHHHHHHhcCCCC------C----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11111111111110 0 1112335789999999999999999999999999864
No 84
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.7e-42 Score=343.76 Aligned_cols=257 Identities=23% Similarity=0.372 Sum_probs=204.5
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeCC----CCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
..++|.+.+.||+|+||+||+|.+.. +..||+|.+...........+.+|+.+++.++||||+++++++.+ ...+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 35678899999999999999998642 335999999876555556789999999999999999999999764 5678
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
+||||+.+++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++..
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred EEEecCCCCCHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 99999999999999976532 389999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 442 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 442 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
.............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... .......+.. ....
T Consensus 163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~-----~~~~~~~~~~---~~~~- 233 (281)
T 3cc6_A 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE-----NKDVIGVLEK---GDRL- 233 (281)
T ss_dssp C---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----GGGHHHHHHH---TCCC-
T ss_pred cccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCC-----hHHHHHHHhc---CCCC-
Confidence 65443333344457889999999999999999999999999999998 999995322 1111211111 1100
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
. .+......+.+++.+||+.||++|||+.|+++.|+..
T Consensus 234 -----~----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 234 -----P----KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp -----C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----C----CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 0 1111235689999999999999999999999999853
No 85
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.3e-41 Score=350.46 Aligned_cols=254 Identities=20% Similarity=0.279 Sum_probs=205.5
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
..++|.+.+.||+|+||.||+|.+. +|+.||+|++..... ......+.+|+.+++.++||||+++++++.++...++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567999999999999999999976 689999999975543 23345688999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---CcEEEeccccce
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLAK 440 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfGla~ 440 (613)
|||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||++.
T Consensus 107 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp ECCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 99999999999887543 489999999999999999999999 99999999999999865 459999999998
Q ss_pred ecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 441 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 441 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
...... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... . ......... ....
T Consensus 180 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~-----~---~~~~~~i~~-~~~~ 248 (362)
T 2bdw_A 180 EVNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----Q---HRLYAQIKA-GAYD 248 (362)
T ss_dssp CCTTCC--SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----H---HHHHHHHHH-TCCC
T ss_pred EecCCc--ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----H---HHHHHHHHh-CCCC
Confidence 665322 2234569999999999999899999999999999999999999995221 1 111111111 1100
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
............+.+++.+||+.||++|||+.|+++.
T Consensus 249 ------~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 249 ------YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp ------CCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred ------CCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000111224578899999999999999999999864
No 86
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.4e-42 Score=355.41 Aligned_cols=263 Identities=25% Similarity=0.419 Sum_probs=194.2
Q ss_pred HHHhhCCCCCCccccCcCcEEEEEEeCC-CC---EEEEEEecccc-CcccHHHHHHHHHHHhhcccCccceeeEEEEcCC
Q 007200 284 QVATDNFSNRNILGRGGFGKVYKGRLTD-GS---LVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 358 (613)
Q Consensus 284 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~-~~---~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 358 (613)
.+..++|.+.+.||+|+||+||+|.+.. +. .||||+++... .......+.+|+++++.++||||+++++++....
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 3455789999999999999999999763 32 79999997653 2234567899999999999999999999998776
Q ss_pred ce------EEEEecccCCcchhhhhccC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc
Q 007200 359 ER------LLVYPFMVNGSVASCLRERG--QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 430 (613)
Q Consensus 359 ~~------~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 430 (613)
.. ++||||+.+|+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+||++++++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 55 99999999999999986543 2223589999999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCc-eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHH
Q 007200 431 AVVGDFGLAKLMDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLD 508 (613)
Q Consensus 431 ~kl~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~ 508 (613)
+||+|||+++........ ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.... ......
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~ 250 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIE-----NAEIYN 250 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHH
T ss_pred EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccC-----hHHHHH
Confidence 999999999866433221 2223446789999999999999999999999999999999 999996322 111111
Q ss_pred HHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 509 WVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
. ....... .........+.+++.+||+.||++|||+.++++.|+++
T Consensus 251 ~---~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 296 (323)
T 3qup_A 251 Y---LIGGNRL----------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296 (323)
T ss_dssp H---HHTTCCC----------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred H---HhcCCCC----------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1 1111110 11122335789999999999999999999999999864
No 87
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.5e-41 Score=346.06 Aligned_cols=254 Identities=25% Similarity=0.340 Sum_probs=195.6
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc--ccHHHHHHHHHHHhhcccCccceeeEEEEcCCce---
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER--- 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~--- 360 (613)
.++|++.+.||+|+||.||+|.+. +++.||||+++..... .....+.+|+.++..++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 467999999999999999999975 7889999999765432 2245688999999999999999999998765443
Q ss_pred -EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 361 -LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 361 -~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
++||||+++++|.++++..+ ++++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a 163 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIA 163 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCc
Confidence 99999999999999997654 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCC--ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc
Q 007200 440 KLMDYKDT--HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 517 (613)
Q Consensus 440 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
+....... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.... ............
T Consensus 164 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~--------~~~~~~~~~~~~ 235 (311)
T 3ork_A 164 RAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS--------PVSVAYQHVRED 235 (311)
T ss_dssp ------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHCC
T ss_pred ccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHhcCC
Confidence 86653322 12233558999999999999999999999999999999999999995322 111111211111
Q ss_pred cccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 518 KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
...... . .......+.+++.+||+.||++||++.++++
T Consensus 236 ~~~~~~---~----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 236 PIPPSA---R----HEGLSADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp CCCHHH---H----STTCCHHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred CCCccc---c----cCCCCHHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 111000 0 0112357889999999999999998877765
No 88
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.4e-42 Score=350.17 Aligned_cols=246 Identities=22% Similarity=0.367 Sum_probs=201.4
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc--ccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
++|.+.+.||+|+||+||+|.+. +++.||||++...... .....+.+|+.+++.++||||+++++++.++...++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57889999999999999999975 7899999998654211 22346889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+ +|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 89 E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp CCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred ECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 999 789999887654 389999999999999999999999 999999999999999999999999999986543
Q ss_pred CCCceeeccccccccccccccccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.. ......||+.|+|||.+.+..+ ++++|||||||++|+|++|+.||+....... ...+.
T Consensus 161 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-----------------~~~i~ 221 (336)
T 3h4j_B 161 GN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-----------------FKKVN 221 (336)
T ss_dssp SB--TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-----------------BCCCC
T ss_pred Cc--ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-----------------HHHHH
Confidence 32 2234569999999999988776 7899999999999999999999963321100 00110
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... ...+......+.+++.+||+.||.+|||+.|+++
T Consensus 222 ~~~--~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 222 SCV--YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp SSC--CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred cCC--CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 000 0112223456889999999999999999999986
No 89
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.8e-41 Score=337.82 Aligned_cols=254 Identities=22% Similarity=0.300 Sum_probs=201.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|.+.+.||+|+||+||+|... ++..+|+|++...........+.+|+++++.++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 367889999999999999999976 6889999999877666567789999999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEeccccceec
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfGla~~~ 442 (613)
|+++|+|.+++.........+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 9999999999865432234599999999999999999999999 99999999999999 45678999999999765
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
.... ......||+.|+|||.+. +.++.++||||||+++|||++|+.||.... .................
T Consensus 178 ~~~~--~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~--------~~~~~~~~~~~~~~~~~ 246 (285)
T 3is5_A 178 KSDE--HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS--------LEEVQQKATYKEPNYAV 246 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCCCC
T ss_pred CCcc--cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC--------HHHHHhhhccCCccccc
Confidence 4322 233455899999999875 568899999999999999999999996322 11111111111100000
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. . ......+.+++.+||+.||++|||+.|+++
T Consensus 247 -~---~----~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 247 -E---C----RPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred -c---c----CcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0 012356889999999999999999999986
No 90
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.9e-42 Score=352.01 Aligned_cols=269 Identities=25% Similarity=0.403 Sum_probs=216.2
Q ss_pred cCHHHHHHHhhCCCCCCccccCcCcEEEEEEeC------CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceee
Q 007200 278 FSLRELQVATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR 351 (613)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 351 (613)
+...++++..++|.+.+.||+|+||.||+|.+. +++.||||.+...........+.+|+.+++.++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 444556677789999999999999999999864 36789999998665555556789999999999999999999
Q ss_pred EEEEcCCceEEEEecccCCcchhhhhccC------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 007200 352 GFCMTPTERLLVYPFMVNGSVASCLRERG------QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL 425 (613)
Q Consensus 352 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll 425 (613)
+++.++...++||||+.+|+|.++++... ....++++..+..++.|++.||+|||++ +|+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEE
Confidence 99999999999999999999999987532 1123479999999999999999999999 99999999999999
Q ss_pred cCCCcEEEeccccceecCCCCCce-eeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCc
Q 007200 426 DEEFEAVVGDFGLAKLMDYKDTHV-TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDD 503 (613)
Q Consensus 426 ~~~~~~kl~DfGla~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~ 503 (613)
+.++.+||+|||+++......... .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||....
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------ 245 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS------ 245 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC------
T ss_pred cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC------
Confidence 999999999999998654322211 122346889999999999999999999999999999999 899985321
Q ss_pred chHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 504 VMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
..+......... .. .........+.+++.+||+.||++|||+.|+++.|+..
T Consensus 246 --~~~~~~~~~~~~-~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 246 --NEQVLRFVMEGG-LL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp --HHHHHHHHHTTC-CC---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred --HHHHHHHHHcCC-cC---------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence 111111111111 10 01112345789999999999999999999999999864
No 91
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.4e-42 Score=350.48 Aligned_cols=270 Identities=27% Similarity=0.411 Sum_probs=216.0
Q ss_pred cCHHHHHHHhhCCCCCCccccCcCcEEEEEEe------CCCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCcccee
Q 007200 278 FSLRELQVATDNFSNRNILGRGGFGKVYKGRL------TDGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRL 350 (613)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l 350 (613)
+...++....++|.+.+.||+|+||+||+|.+ .+++.||||+++..........+.+|+.++.++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 45566777788999999999999999999984 246789999998765555556789999999999 69999999
Q ss_pred eEEEEcCC-ceEEEEecccCCcchhhhhccCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 007200 351 RGFCMTPT-ERLLVYPFMVNGSVASCLRERGQS------------QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRD 417 (613)
Q Consensus 351 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~D 417 (613)
++++..++ ..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||++ +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99988754 489999999999999999765432 22388999999999999999999999 999999
Q ss_pred CCCCceeecCCCcEEEeccccceecCCCCC-ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCccc
Q 007200 418 VKAANILLDEEFEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDL 495 (613)
Q Consensus 418 lk~~NIll~~~~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~ 495 (613)
|||+||+++.++.+||+|||+++....... .......||+.|+|||.+.+..++.++||||||+++|||+| |+.||..
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~ 253 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence 999999999999999999999987654332 22334557889999999999999999999999999999998 9999963
Q ss_pred ccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 496 ARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
... ...... ........ .. +......+.+++.+||+.||++|||+.|+++.|+..
T Consensus 254 ~~~----~~~~~~----~~~~~~~~-----~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 254 VKI----DEEFCR----RLKEGTRM-----RA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp CCC----SHHHHH----HHHHTCCC-----CC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cch----hHHHHH----HhccCccC-----CC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 221 111111 11111100 01 111235689999999999999999999999999853
No 92
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=6e-41 Score=344.48 Aligned_cols=259 Identities=17% Similarity=0.193 Sum_probs=206.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceEEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 364 (613)
.++|.+.+.||+|+||+||+|... +|+.||||++...... ..+..|+.+++.+ +||||+++++++..+...++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 84 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRA---PQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVL 84 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSS---CCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccch---HHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEE
Confidence 467889999999999999999975 7899999998754322 3578999999999 8999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc-----EEEeccccc
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE-----AVVGDFGLA 439 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~kl~DfGla 439 (613)
||+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||++
T Consensus 85 e~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 85 ELL-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp ECC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred EeC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 999 999999998642 2499999999999999999999999 9999999999999999887 999999999
Q ss_pred eecCCCCCc------eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHH
Q 007200 440 KLMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 513 (613)
Q Consensus 440 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 513 (613)
+........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... .....+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~-----~~~~~~~~~~i 232 (330)
T 2izr_A 158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK-----ADTLKERYQKI 232 (330)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CSSHHHHHHHH
T ss_pred eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc-----cccHHHHHHHH
Confidence 876443221 1234569999999999999999999999999999999999999996332 11111111111
Q ss_pred hhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 514 LKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
........ . ..... ..+ .+.+++..||+.||.+||++.+|++.|++.
T Consensus 233 ~~~~~~~~-~-~~~~~----~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 233 GDTKRATP-I-EVLCE----NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp HHHHHHSC-H-HHHTT----TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred HhhhccCC-H-HHHhc----cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 11100000 0 00000 012 789999999999999999999999999753
No 93
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=2.1e-41 Score=352.69 Aligned_cols=266 Identities=17% Similarity=0.198 Sum_probs=202.0
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeCC------CCEEEEEEeccccCccc----------HHHHHHHHHHHhhcccCccce
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLTD------GSLVAVKRLKEERTQGG----------ELQFQTEVEMISMAVHRNLLR 349 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~----------~~~~~~e~~~l~~l~h~niv~ 349 (613)
..++|.+.+.||+|+||+||+|.+.. ++.||||++........ ...+..|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34679999999999999999999764 47899999865432100 012334556677788999999
Q ss_pred eeEEEEcC----CceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 007200 350 LRGFCMTP----TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL 425 (613)
Q Consensus 350 l~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll 425 (613)
+++++... ...++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill 185 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLL 185 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEE
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEE
Confidence 99998764 4479999999 999999997643 2499999999999999999999999 99999999999999
Q ss_pred c--CCCcEEEeccccceecCCCCCc------eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCccccc
Q 007200 426 D--EEFEAVVGDFGLAKLMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLAR 497 (613)
Q Consensus 426 ~--~~~~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~ 497 (613)
+ .++.+||+|||+++.+...... ......||+.|+|||.+.+..++.++|||||||++|||+||+.||....
T Consensus 186 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~ 265 (364)
T 3op5_A 186 NYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNL 265 (364)
T ss_dssp ESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred ecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccc
Confidence 9 8899999999999876533211 1133459999999999999999999999999999999999999997321
Q ss_pred ccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 498 LANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
.............. ..+..+.++.... ...+..+.+++..||+.||++||++.+|++.|++
T Consensus 266 ----~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~ 326 (364)
T 3op5_A 266 ----KDPKYVRDSKIRYR-ENIASLMDKCFPA---ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQ 326 (364)
T ss_dssp ----TCHHHHHHHHHHHH-HCHHHHHHHHSCT---TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred ----cCHHHHHHHHHHhh-hhHHHHHHHhccc---ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 11122222221111 1122222221111 1123578999999999999999999999999875
No 94
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.8e-42 Score=360.78 Aligned_cols=263 Identities=22% Similarity=0.273 Sum_probs=208.9
Q ss_pred CHHHHHHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEE
Q 007200 279 SLRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCM 355 (613)
Q Consensus 279 ~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 355 (613)
.+++.....++|++.+.||+|+||+||+|+.. +|+.||+|++++... ......+.+|..++..++||||+++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 45566667789999999999999999999986 799999999975321 112234788999999999999999999999
Q ss_pred cCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEec
Q 007200 356 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 435 (613)
Q Consensus 356 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~D 435 (613)
++...++||||+++|+|.+++...+. .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~D 205 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGE---RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLAD 205 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEee
Confidence 99999999999999999999986532 389999999999999999999999 999999999999999999999999
Q ss_pred cccceecCCCCCceeeccccccccccccccc-------cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHH
Q 007200 436 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS-------TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 508 (613)
Q Consensus 436 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~ 508 (613)
||+++..............||+.|+|||++. +..++.++|||||||++|||++|+.||.... ..+
T Consensus 206 FGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~--------~~~ 277 (412)
T 2vd5_A 206 FGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS--------TAE 277 (412)
T ss_dssp CTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHH
T ss_pred chhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC--------HHH
Confidence 9999877654433344567999999999997 3568999999999999999999999996321 111
Q ss_pred HHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCC---CCHHHHHH
Q 007200 509 WVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMER---PKMSEVVR 562 (613)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~evl~ 562 (613)
........... ...+.. .......+.+++.+||. +|++| |+++|+++
T Consensus 278 ~~~~i~~~~~~--~~~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 278 TYGKIVHYKEH--LSLPLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp HHHHHHTHHHH--CCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred HHHHHHhcccC--cCCCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 11122111100 000100 11223578999999999 99998 58888876
No 95
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=8e-42 Score=340.42 Aligned_cols=252 Identities=23% Similarity=0.329 Sum_probs=204.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcC--CceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 363 (613)
.++|...+.||+|+||.||+|++. ++.||||+++.... ......+.+|+.+++.++||||+++++++.++ ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 467888999999999999999986 88999999976542 23345789999999999999999999999887 778999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeecCCCcEEEecccccee
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
|||+++|+|.++++.... .++++..+..++.|++.||+|||+. + |+||||||+||+++.++.++|+|||++..
T Consensus 88 ~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTN--FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp EECCTTCBHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred ecccCCCcHHHHHhhccc--CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 999999999999986432 2489999999999999999999998 7 99999999999999999999999998764
Q ss_pred cCCCCCceeeccccccccccccccccCCCCC---cccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccc
Q 007200 442 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSE---KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 518 (613)
Q Consensus 442 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (613)
... ....||+.|+|||.+.+..++. ++||||||+++|||++|+.||.... .............
T Consensus 163 ~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~--------~~~~~~~~~~~~~ 228 (271)
T 3kmu_A 163 FQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS--------NMEIGMKVALEGL 228 (271)
T ss_dssp TSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC--------HHHHHHHHHHSCC
T ss_pred ecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC--------hHHHHHHHHhcCC
Confidence 322 2235899999999998766544 7999999999999999999996221 1111111111111
Q ss_pred ccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 519 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
.+. .+......+.+++..||+.||++|||+.++++.|+.+
T Consensus 229 -----~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 229 -----RPT----IPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp -----CCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred -----CCC----CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 111 1122345789999999999999999999999999753
No 96
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-41 Score=341.69 Aligned_cols=255 Identities=24% Similarity=0.361 Sum_probs=206.2
Q ss_pred hhCCCCCC-ccccCcCcEEEEEEeC---CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 287 TDNFSNRN-ILGRGGFGKVYKGRLT---DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 287 ~~~~~~~~-~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
.++|.+.+ .||+|+||.||+|.+. ++..||||+++..........+.+|+++++.++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 34566665 8999999999999864 57789999998765555566799999999999999999999999 4567899
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+.+++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 87 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 160 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160 (287)
T ss_dssp EEECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeee
Confidence 999999999999997533 3489999999999999999999999 9999999999999999999999999999877
Q ss_pred CCCCCce--eeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 443 DYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 443 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
....... .....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.... ...... .......
T Consensus 161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~~~~~~---~i~~~~~- 231 (287)
T 1u59_A 161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----GPEVMA---FIEQGKR- 231 (287)
T ss_dssp TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----THHHHH---HHHTTCC-
T ss_pred ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----HHHHHH---HHhcCCc-
Confidence 5433222 222346889999999998889999999999999999998 999996321 111111 1111110
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
...+......+.+++..||+.||++||++.++++.|+.
T Consensus 232 ---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 269 (287)
T 1u59_A 232 ---------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 269 (287)
T ss_dssp ---------CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred ---------CCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 01112234678999999999999999999999999975
No 97
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=9.7e-41 Score=344.97 Aligned_cols=245 Identities=22% Similarity=0.296 Sum_probs=204.5
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
++|...+.||+|+||.||+|+.. +|+.||+|++.... .......+.+|+.+++.++||||+++++++.+....++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999986 68999999996543 1223557889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 121 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~ 193 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG 193 (350)
T ss_dssp ECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccC
Confidence 9999999999998754 389999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 524 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (613)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+......... .
T Consensus 194 ~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~-~----- 255 (350)
T 1rdq_E 194 R----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ--------PIQIYEKIVSGK-V----- 255 (350)
T ss_dssp C----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C-----
T ss_pred C----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC--------HHHHHHHHHcCC-C-----
Confidence 2 234569999999999999999999999999999999999999996321 112222222111 1
Q ss_pred CccCCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 007200 525 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPK-----MSEVVR 562 (613)
Q Consensus 525 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 562 (613)
. .+......+.+++.+||+.||++||+ ++|+++
T Consensus 256 -~----~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 256 -R----FPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp -C----CCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred -C----CCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 0 11122357899999999999999998 777765
No 98
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.5e-41 Score=344.22 Aligned_cols=265 Identities=26% Similarity=0.382 Sum_probs=207.5
Q ss_pred hhCCCCCCccccCcCcEEEEEEe-----CCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcC--Cc
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--TE 359 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~ 359 (613)
.+.|+..+.||+|+||.||+|++ .+++.||+|+++..........+.+|+.+++.++||||+++++++..+ ..
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 99 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG 99 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CC
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCce
Confidence 35688889999999999999983 368899999998766555667899999999999999999999999876 66
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 173 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLT 173 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred EEEEEEeCCCCcHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccc
Confidence 8999999999999999966432 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCc--eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccc------cCCCcchHHHHHH
Q 007200 440 KLMDYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL------ANDDDVMLLDWVK 511 (613)
Q Consensus 440 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~------~~~~~~~~~~~~~ 511 (613)
+........ ......||..|+|||.+.+..++.++||||||+++|||++|+.|+..... ...........+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (302)
T 4e5w_A 174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLV 253 (302)
T ss_dssp EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHH
T ss_pred ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHH
Confidence 877544322 22344588889999999999999999999999999999999999753210 0011111111111
Q ss_pred HHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 512 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
...... .....+......+.+++.+||+.||++|||+.++++.|+.
T Consensus 254 ~~~~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 254 NTLKEG---------KRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp HHHHTT---------CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHhcc---------CCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence 111111 1111122334678999999999999999999999999974
No 99
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.4e-41 Score=353.58 Aligned_cols=268 Identities=21% Similarity=0.289 Sum_probs=203.5
Q ss_pred hhCCCCCCccccC--cCcEEEEEEeC-CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 287 TDNFSNRNILGRG--GFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 287 ~~~~~~~~~ig~G--~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
.++|++.+.||+| +||+||+|++. +|+.||||++...... .....+.+|+.+++.++||||+++++++.++...++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999987 7999999999765433 234568889999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||.+...
T Consensus 104 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~ 178 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSM 178 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEEC
T ss_pred EEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceee
Confidence 9999999999999976532 2389999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCC------ceeecccccccccccccccc--CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHh
Q 007200 443 DYKDT------HVTTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 514 (613)
Q Consensus 443 ~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 514 (613)
..... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||...... ......+....
T Consensus 179 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~----~~~~~~~~~~~ 254 (389)
T 3gni_B 179 ISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT----QMLLEKLNGTV 254 (389)
T ss_dssp EETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST----THHHHC-----
T ss_pred ccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH----HHHHHHhcCCC
Confidence 32111 11122358899999999987 57899999999999999999999999632211 01111000000
Q ss_pred hc---------cc-------------ccccccC---------ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 515 KE---------KK-------------LEQLVDS---------DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 515 ~~---------~~-------------~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
.. .. ....... .............+.+++.+||+.||++|||+.|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 255 PCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ---------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred CccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 00 0000000 00001122234678999999999999999999999863
No 100
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.7e-42 Score=349.77 Aligned_cols=256 Identities=25% Similarity=0.401 Sum_probs=200.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCC----EEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGS----LVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
.++|++.+.||+|+||+||+|.+. +++ +||+|.+...........+.+|+.+++.++||||+++++++..+. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 367889999999999999999975 444 358888766555556778999999999999999999999998754 88
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
++++|+.+|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred EEEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 99999999999999986543 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc-eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 442 MDYKDTH-VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 442 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
....... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.... .......+. ...
T Consensus 167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~~~~----~~~- 236 (327)
T 3lzb_A 167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP-----ASEISSILE----KGE- 236 (327)
T ss_dssp -------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----GGGHHHHHH----TTC-
T ss_pred ccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHHHHH----cCC-
Confidence 6433221 2223446789999999999999999999999999999999 999996322 111111111 110
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
....+......+.+++..||+.||++|||+.|+++.|+..
T Consensus 237 --------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 237 --------RLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp --------CCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --------CCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 0111122335689999999999999999999999999864
No 101
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.8e-41 Score=347.91 Aligned_cols=251 Identities=24% Similarity=0.327 Sum_probs=203.3
Q ss_pred HHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCc
Q 007200 284 QVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTE 359 (613)
Q Consensus 284 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 359 (613)
....++|.+.+.||+|+||+||+|+.+ +|+.||+|+++.... ......+..|..++..+ +||||+++++++.+...
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 455678999999999999999999986 688999999976431 22345677889988876 89999999999999999
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a 165 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMC 165 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhh
Confidence 999999999999999998654 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 440 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 440 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............
T Consensus 166 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~-- 234 (345)
T 1xjd_A 166 KENMLGD-AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--------EEELFHSIRMDN-- 234 (345)
T ss_dssp BCCCCTT-CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC--
T ss_pred hhcccCC-CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC--------HHHHHHHHHhCC--
Confidence 8543222 22345679999999999999999999999999999999999999996321 111111111111
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMS-EVV 561 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl 561 (613)
... +......+.+++.+||..||++||++. +++
T Consensus 235 -----~~~----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 235 -----PFY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp -----CCC----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred -----CCC----CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 011 112235788999999999999999997 554
No 102
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-41 Score=348.94 Aligned_cols=262 Identities=23% Similarity=0.338 Sum_probs=195.2
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEec
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 366 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 366 (613)
++|.+.+.||+|+||+||+|.+. +++.||+|++...........+.+|+.+++.++||||+++++++.++...++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 56888999999999999999987 78999999997554332222455799999999999999999999999999999999
Q ss_pred ccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCCC
Q 007200 367 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 446 (613)
Q Consensus 367 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 446 (613)
+. |+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGN---IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 154 (324)
T ss_dssp CS-EEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC----
T ss_pred cc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc
Confidence 97 589888876532 489999999999999999999999 99999999999999999999999999998654322
Q ss_pred Cceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccc---cccc
Q 007200 447 THVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK---LEQL 522 (613)
Q Consensus 447 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 522 (613)
. ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .......+........ +...
T Consensus 155 ~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~~~~~~ 228 (324)
T 3mtl_A 155 K-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST-----VEEQLHFIFRILGTPTEETWPGI 228 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCTTTSTTG
T ss_pred c-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCChHhchhh
Confidence 2 2233458999999999876 568999999999999999999999996322 1112222222111110 0000
Q ss_pred ccC---------ccCCCC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 523 VDS---------DMEGNY----IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 523 ~~~---------~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... ...... .......+.+++.+||+.||++|||++|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 229 LSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp GGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 000 000000 0112356889999999999999999999987
No 103
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=6.5e-41 Score=350.55 Aligned_cols=253 Identities=20% Similarity=0.281 Sum_probs=205.8
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|.+.+.||+|+||+||+|... +|+.||+|++..... .....+.+|+.+++.++||||+++++++.+....++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccch-hhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 367999999999999999999976 688999999875432 234578899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC--CCcEEEeccccceecC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE--EFEAVVGDFGLAKLMD 443 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~--~~~~kl~DfGla~~~~ 443 (613)
|+.+|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++. ++.+||+|||+++...
T Consensus 129 ~~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 129 FLSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp CCCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred cCCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecC
Confidence 999999999987543 2489999999999999999999999 9999999999999974 4689999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.... . .+.+......... .
T Consensus 203 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~---~~~~~~i~~~~~~---~ 269 (387)
T 1kob_A 203 PDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED-----D---LETLQNVKRCDWE---F 269 (387)
T ss_dssp TTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-----H---HHHHHHHHHCCCC---C
T ss_pred CCcc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC-----H---HHHHHHHHhCCCC---C
Confidence 4322 233469999999999999999999999999999999999999996321 1 1112221111100 1
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
... ........+.+++.+||+.||++|||+.|+++.
T Consensus 270 ~~~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 270 DED----AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp CSS----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred Ccc----ccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 111 111234578899999999999999999999874
No 104
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.8e-41 Score=353.90 Aligned_cols=271 Identities=19% Similarity=0.230 Sum_probs=215.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCC--ceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT--ERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv 363 (613)
.++|.+.+.||+|+||+||+|.+. +|+.||||++...........+.+|+++++.++||||+++++++.... ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 357889999999999999999987 589999999987655555677889999999999999999999998765 67999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----cCCCcEEEeccccc
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL----DEEFEAVVGDFGLA 439 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~kl~DfGla 439 (613)
|||+++|+|.++++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNA-YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGT-TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EecCCCCCHHHHHHhhhcc-cCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 9999999999999765322 2389999999999999999999999 99999999999999 77788999999999
Q ss_pred eecCCCCCceeecccccccccccccccc--------CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007200 440 KLMDYKDTHVTTAVRGTIGHIAPEYLST--------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 511 (613)
Q Consensus 440 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 511 (613)
+...... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......... .+.+.
T Consensus 164 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~----~~~~~ 237 (396)
T 4eut_A 164 RELEDDE--QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRN----KEVMY 237 (396)
T ss_dssp EECCCGG--GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTC----HHHHH
T ss_pred eEccCCC--ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccch----HHHHH
Confidence 8765332 2234569999999999865 56788999999999999999999999643321111 22222
Q ss_pred HHhhcccc---cccc-----------cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 512 GLLKEKKL---EQLV-----------DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 512 ~~~~~~~~---~~~~-----------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
........ ..+. +..............+.+++..||+.||++|||+.|+++.++++
T Consensus 238 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~i 307 (396)
T 4eut_A 238 KIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (396)
T ss_dssp HHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred HHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHH
Confidence 22222111 1000 00111234467788899999999999999999999999988753
No 105
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1e-40 Score=337.37 Aligned_cols=259 Identities=15% Similarity=0.195 Sum_probs=206.8
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceEEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 364 (613)
.++|.+.+.||+|+||.||+|.+. +|+.||||++...... ..+.+|+.++..+ .|+|++++++++.++...++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA---PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS---CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCcc---HHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 467999999999999999999974 7899999998654322 3477899999998 7999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc-----EEEeccccc
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE-----AVVGDFGLA 439 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-----~kl~DfGla 439 (613)
||+ +++|.+++..... ++++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++
T Consensus 86 e~~-~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCGR---KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred Eec-CCCHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 999 9999999986532 489999999999999999999999 9999999999999987776 999999999
Q ss_pred eecCCCCCc------eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHH
Q 007200 440 KLMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 513 (613)
Q Consensus 440 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 513 (613)
+........ ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .........+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~ 236 (298)
T 1csn_A 159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA--ATNKQKYERIGEK 236 (298)
T ss_dssp EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCS--CCHHHHHHHHHHH
T ss_pred cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhc--cccHHHHHHHHhh
Confidence 876543221 23445699999999999999999999999999999999999999964221 1111111111111
Q ss_pred hhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 514 LKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
.......... ...+..+.+++..||+.||++|||+.+|++.|+.
T Consensus 237 ~~~~~~~~~~---------~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~ 280 (298)
T 1csn_A 237 KQSTPLRELC---------AGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSK 280 (298)
T ss_dssp HHHSCHHHHT---------TTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHH
T ss_pred ccCccHHHHH---------hhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHH
Confidence 1111111100 0123578999999999999999999999999975
No 106
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-41 Score=344.46 Aligned_cols=247 Identities=23% Similarity=0.266 Sum_probs=194.5
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 362 (613)
..++|+..++||+|+||+||+|.+. +|+.||||++...... .....+..|+..+..+ .||||+++++++.++...++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 3467999999999999999999987 7999999998654322 2333455566655555 89999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+ +++|.+++..... ++++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++...
T Consensus 135 v~e~~-~~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~ 207 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWGA---SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVEL 207 (311)
T ss_dssp EEECC-CCBHHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEEC
T ss_pred EEecc-CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeec
Confidence 99999 7789988876542 499999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
.... ......||+.|+|||++.+ .++.++|||||||++|||++|..|+.... . .... ......
T Consensus 208 ~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----------~-~~~~-~~~~~~-- 270 (311)
T 3p1a_A 208 GTAG--AGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----------G-WQQL-RQGYLP-- 270 (311)
T ss_dssp C--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----------H-HHHH-TTTCCC--
T ss_pred ccCC--CCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----------H-HHHH-hccCCC--
Confidence 4322 2334559999999999875 78999999999999999999977664211 0 0111 111100
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
+. ........+.+++.+||+.||++|||+.|+++
T Consensus 271 --~~----~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 --PE----FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp --HH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred --cc----cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 00 01112367899999999999999999999987
No 107
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-41 Score=348.06 Aligned_cols=257 Identities=27% Similarity=0.452 Sum_probs=201.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCC-----CCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTD-----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
.++|...+.||+|+||+||+|.+.. +..||||.++..........+.+|+.+++.++||||+++++++.+....+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3567778999999999999998652 23599999986655555667899999999999999999999999999999
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
+||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.
T Consensus 123 lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTT---CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEeCCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 99999999999999976432 489999999999999999999999 999999999999999999999999999987
Q ss_pred cCCCCCc--eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccc
Q 007200 442 MDYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKK 518 (613)
Q Consensus 442 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (613)
....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+..........
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--------~~~~~~~~~~~~~ 268 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS--------NHEVMKAINDGFR 268 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTTCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC--------HHHHHHHHHCCCc
Confidence 6533221 1222336788999999999999999999999999999999 999995221 1111111111111
Q ss_pred ccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 519 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
. .........+.+++.+||+.||++||++.++++.|+..
T Consensus 269 ~----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 269 L----------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp C----------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred C----------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1 01112345789999999999999999999999999753
No 108
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.2e-41 Score=335.67 Aligned_cols=253 Identities=22% Similarity=0.349 Sum_probs=205.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|++.+.||+|+||.||+|... +++.||||++...........+.+|+.+++.++||||+++++++.++...++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467889999999999999999986 7899999999765554456778999999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred ecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 999999999986542 389999999999999999999999 9999999999999999999999999999865432
Q ss_pred CC-ceeeccccccccccccccccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 446 DT-HVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 446 ~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.. .......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||..... .......+.. .... .
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~----~~~~---~ 228 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD---SCQEYSDWKE----KKTY---L 228 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCT---TSHHHHHHHT----TCTT---S
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCch---HHHHHHHhhh----cccc---c
Confidence 21 12234568999999999987765 7889999999999999999999963321 1111111111 1000 0
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.........+.+++.+||+.||++|||+.|+++
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 229 ------NPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ------TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ------CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 001122356889999999999999999999986
No 109
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-40 Score=337.35 Aligned_cols=259 Identities=20% Similarity=0.257 Sum_probs=199.8
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc--cHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|.+.+.||+|+||.||+|.+. +++.||+|++....... ....+.+|+.++..++||||+++++++..+...++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467999999999999999999976 68899999997653322 235788999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+++++|.+++.... ++++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 113 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 99999999999998653 389999999999999999999999 99999999999999999999999999998665
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
...........|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ..+..........
T Consensus 186 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~---------~~~~~~~~~~~~~--- 253 (309)
T 2h34_A 186 DEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL---------SVMGAHINQAIPR--- 253 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH---------HHHHHHHHSCCCC---
T ss_pred ccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH---------HHHHHHhccCCCC---
Confidence 4333333445689999999999999999999999999999999999999963221 1111111111100
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHhhcCC
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-KMSEVVRMLEGDG 568 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~~~ 568 (613)
. ..........+.+++.+||+.||++|| +++++++.|+..-
T Consensus 254 -~---~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 254 -P---STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp -G---GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred -c---cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 0 001112234688999999999999999 9999999998653
No 110
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.3e-40 Score=341.40 Aligned_cols=249 Identities=24% Similarity=0.308 Sum_probs=194.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEe----CCCCEEEEEEeccccC---cccHHHHHHHHHHHhhcccCccceeeEEEEcCCc
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRL----TDGSLVAVKRLKEERT---QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 359 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 359 (613)
.++|++.+.||+|+||.||+++. .+|+.||+|+++.... ......+.+|+.+++.++||||+++++++..+..
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999997 4789999999976532 1233457889999999999999999999999999
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred EEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 999999999999999997654 388999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 440 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 440 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
+...... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ....+....... .
T Consensus 169 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~~~~~~~i~~~~-~ 238 (327)
T 3a62_A 169 KESIHDG-TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN--------RKKTIDKILKCK-L 238 (327)
T ss_dssp -----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHHTC-C
T ss_pred cccccCC-ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhCC-C
Confidence 7543222 22344569999999999999999999999999999999999999996321 111122222111 0
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 562 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 562 (613)
. .+......+.+++.+||+.||++|| ++.|+++
T Consensus 239 ------~----~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 ------N----LPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp ------C----CCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred ------C----CCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 0 1112235788999999999999999 6777766
No 111
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3e-41 Score=351.08 Aligned_cols=209 Identities=22% Similarity=0.300 Sum_probs=183.2
Q ss_pred cccccCHHHHHHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcc-----cCcc
Q 007200 274 QLKRFSLRELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-----HRNL 347 (613)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----h~ni 347 (613)
....+++.+.....++|.+.+.||+|+||+||+|++. +++.||||+++.. ......+..|+.++..+. ||||
T Consensus 21 ~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~h~~i 98 (360)
T 3llt_A 21 EIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI--KKYTRSAKIEADILKKIQNDDINNNNI 98 (360)
T ss_dssp GGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--HHHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred cceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc--hhhhhhhHHHHHHHHHhcccCCCCCCe
Confidence 3456677777788899999999999999999999985 6899999999743 223456778999998886 9999
Q ss_pred ceeeEEEEcCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC
Q 007200 348 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE 427 (613)
Q Consensus 348 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 427 (613)
+++++++...+..++||||+ +++|.+++...... .+++..+..++.||+.||+|||++ +|+||||||+|||++.
T Consensus 99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~ 172 (360)
T 3llt_A 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYN--GFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDD 172 (360)
T ss_dssp CCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTC--CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESC
T ss_pred ecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcc
Confidence 99999999999999999999 99999999865432 489999999999999999999999 9999999999999975
Q ss_pred -------------------------CCcEEEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHH
Q 007200 428 -------------------------EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVM 482 (613)
Q Consensus 428 -------------------------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~i 482 (613)
++.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i 248 (360)
T 3llt_A 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCV 248 (360)
T ss_dssp TTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred ccccccccchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHHcCCCCCCccchHHHHHH
Confidence 789999999999865432 234568999999999999999999999999999
Q ss_pred HHHHHhCCCCcc
Q 007200 483 LLELITGQRAFD 494 (613)
Q Consensus 483 l~elltg~~p~~ 494 (613)
+|||++|+.||.
T Consensus 249 l~ell~g~~pf~ 260 (360)
T 3llt_A 249 LAELYTGSLLFR 260 (360)
T ss_dssp HHHHHHSSCSCC
T ss_pred HHHHHHCCCCCC
Confidence 999999999996
No 112
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1e-40 Score=346.68 Aligned_cols=253 Identities=23% Similarity=0.265 Sum_probs=195.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|.+.+.||+|+||+||+++.. +++.||||++...... ...+.+|+.+++.++||||+++++++.++...++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI--DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS--CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc--cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 467999999999999999999987 7899999999754332 3468899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc--EEEeccccceecC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE--AVVGDFGLAKLMD 443 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~kl~DfGla~~~~ 443 (613)
|+.+|+|.+++...+ .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+++...
T Consensus 97 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~ 169 (361)
T 3uc3_A 97 YASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSV 169 (361)
T ss_dssp CCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC----
T ss_pred eCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccc
Confidence 999999999997654 389999999999999999999999 9999999999999987765 9999999997433
Q ss_pred CCCCceeeccccccccccccccccCCCCCc-ccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEK-TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
.. .......||+.|+|||.+.+..++.+ +|||||||++|+|++|+.||..... .......+.........
T Consensus 170 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~~~~~~~~~~~~--- 240 (361)
T 3uc3_A 170 LH--SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEE----PRDYRKTIQRILSVKYS--- 240 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--------CCCHHHHHHHHHTTCCC---
T ss_pred cc--CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCcc----HHHHHHHHHHHhcCCCC---
Confidence 22 12234469999999999988877655 8999999999999999999963321 11122222222211110
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
..........+.+++.+||+.||++|||+.|+++.
T Consensus 241 ------~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 241 ------IPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ------CCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ------CCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00000123568899999999999999999999874
No 113
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=349.74 Aligned_cols=252 Identities=22% Similarity=0.313 Sum_probs=197.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccC-cccHHHHHHHHHHHhhccc--CccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVH--RNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv 363 (613)
.++|++.+.||+|+||.||++...+++.||||++..... ......+.+|+.++..+.| +||+++++++.++...++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 467889999999999999999998899999999875433 2234578899999999986 9999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|| +.+++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+++...
T Consensus 88 ~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~ 158 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 158 (343)
T ss_dssp EC-CCSEEHHHHHHHSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-
T ss_pred Ee-CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccC
Confidence 99 56889999998753 389999999999999999999999 999999999999997 5689999999998765
Q ss_pred CCCCc-eeecccccccccccccccc-----------CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007200 444 YKDTH-VTTAVRGTIGHIAPEYLST-----------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 511 (613)
Q Consensus 444 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 511 (613)
..... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .....+.
T Consensus 159 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-------~~~~~~~ 231 (343)
T 3dbq_A 159 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKLH 231 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-------SHHHHHH
T ss_pred cccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-------hHHHHHH
Confidence 43222 2334569999999999865 678899999999999999999999995211 1111122
Q ss_pred HHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 512 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
...... .....+......+.+++..||+.||++|||+.|+++.
T Consensus 232 ~~~~~~---------~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 232 AIIDPN---------HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHCTT---------SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhcCC---------cccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 221111 1111111123568899999999999999999999874
No 114
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-40 Score=344.61 Aligned_cols=261 Identities=21% Similarity=0.217 Sum_probs=202.6
Q ss_pred HHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc----CcccHHHHHHHHHHHhhcccCccceeeEEEEcCC
Q 007200 284 QVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER----TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 358 (613)
Q Consensus 284 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 358 (613)
....++|.+.+.||+|+||+||+|... +++.||+|++.... .......+.+|+.+++.++||||+++++++.+..
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 455678999999999999999999976 68899999987542 2334567899999999999999999999999999
Q ss_pred ceEEEEecccCCcchhhhhccCCC------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQS------------------------------------QPPLNWSVRKQIALGAARGL 402 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~i~~~L 402 (613)
..++||||+++|+|.+++...... ...+++..+..++.|++.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998531110 11246778899999999999
Q ss_pred HHHHhcCCCCeEecCCCCCceeecCCC--cEEEeccccceecCCCCC---ceeecccccccccccccccc--CCCCCccc
Q 007200 403 AYLHDHCDPKIIHRDVKAANILLDEEF--EAVVGDFGLAKLMDYKDT---HVTTAVRGTIGHIAPEYLST--GKSSEKTD 475 (613)
Q Consensus 403 ~~LH~~~~~~ivH~Dlk~~NIll~~~~--~~kl~DfGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~--~~~~~~~D 475 (613)
+|||++ +|+||||||+||+++.++ .+||+|||+++....... .......||+.|+|||.+.+ ..++.++|
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~D 258 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCD 258 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHH
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHH
Confidence 999999 999999999999998776 899999999987643221 12344569999999999975 67899999
Q ss_pred chhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCC
Q 007200 476 VFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP 555 (613)
Q Consensus 476 VwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 555 (613)
||||||++|||++|+.||.... ..+.+........... . .........+.+++..||+.||++||
T Consensus 259 iwslG~il~el~~g~~pf~~~~--------~~~~~~~~~~~~~~~~--~-----~~~~~~~~~~~~li~~~l~~~p~~Rp 323 (345)
T 3hko_A 259 AWSAGVLLHLLLMGAVPFPGVN--------DADTISQVLNKKLCFE--N-----PNYNVLSPLARDLLSNLLNRNVDERF 323 (345)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCCTT--S-----GGGGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred HHHHHHHHHHHHHCCCCCCCCC--------hHHHHHHHHhcccccC--C-----cccccCCHHHHHHHHHHcCCChhHCC
Confidence 9999999999999999995322 1122222222111100 0 01112235788999999999999999
Q ss_pred CHHHHHH
Q 007200 556 KMSEVVR 562 (613)
Q Consensus 556 t~~evl~ 562 (613)
|+.|+++
T Consensus 324 s~~~~l~ 330 (345)
T 3hko_A 324 DAMRALQ 330 (345)
T ss_dssp CHHHHHH
T ss_pred CHHHHhc
Confidence 9999987
No 115
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=7.3e-41 Score=342.87 Aligned_cols=250 Identities=22% Similarity=0.302 Sum_probs=181.0
Q ss_pred CCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcc-cCccceeeEEEEcCCceEEEEecccCC
Q 007200 293 RNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYPFMVNG 370 (613)
Q Consensus 293 ~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 370 (613)
.+.||+|+||+||+|.+. +|+.||||++... ....+.+|+.++..+. ||||+++++++.++...++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 378999999999999986 6899999998643 3456788999999997 999999999999999999999999999
Q ss_pred cchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC---cEEEeccccceecCCCCC
Q 007200 371 SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF---EAVVGDFGLAKLMDYKDT 447 (613)
Q Consensus 371 sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl~DfGla~~~~~~~~ 447 (613)
+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+++.......
T Consensus 92 ~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 164 (325)
T 3kn6_A 92 ELFERIKKKK----HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164 (325)
T ss_dssp BHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence 9999998653 489999999999999999999999 999999999999998765 899999999986654322
Q ss_pred ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccCcc
Q 007200 448 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDM 527 (613)
Q Consensus 448 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (613)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... ......+....... .... .
T Consensus 165 -~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~~~~~i~~-~~~~------~ 235 (325)
T 3kn6_A 165 -PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSL-TCTSAVEIMKKIKK-GDFS------F 235 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTT-TCCC------C
T ss_pred -cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCcccc-ccccHHHHHHHHHc-CCCC------C
Confidence 2334558999999999999999999999999999999999999996432111 11111222222111 1100 0
Q ss_pred CCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 528 EGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 528 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
...........+.+++..||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 236 EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 00011223467899999999999999999999875
No 116
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.9e-42 Score=376.59 Aligned_cols=260 Identities=26% Similarity=0.397 Sum_probs=210.9
Q ss_pred HHHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 282 ELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 282 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
.+++..++|.+.+.||+|+||.||+|.+.++..||||+++.... ....|.+|+++++.++|+||+++++++.+ ...+
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~ 337 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIY 337 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS--CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccce
Confidence 34456678889999999999999999998778899999976542 35679999999999999999999999876 6789
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
+||||+.+|+|.++++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.
T Consensus 338 lv~e~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 412 (535)
T 2h8h_A 338 IVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARL 412 (535)
T ss_dssp EEECCCTTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTT
T ss_pred EeeehhcCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEccccccee
Confidence 99999999999999975321 2389999999999999999999999 999999999999999999999999999986
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 442 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 442 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
.............++..|+|||.+.+..++.++|||||||++|||++ |+.||.... ..+.+........+
T Consensus 413 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~--------~~~~~~~i~~~~~~- 483 (535)
T 2h8h_A 413 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV--------NREVLDQVERGYRM- 483 (535)
T ss_dssp CCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC--------HHHHHHHHHTTCCC-
T ss_pred cCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--------HHHHHHHHHcCCCC-
Confidence 54322112223346789999999999999999999999999999999 999995221 11112121111111
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
..+..+...+.++|.+||+.||++|||+.+|++.|+..
T Consensus 484 ---------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~ 521 (535)
T 2h8h_A 484 ---------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 521 (535)
T ss_dssp ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11123346789999999999999999999999999864
No 117
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=9.1e-41 Score=357.41 Aligned_cols=249 Identities=22% Similarity=0.289 Sum_probs=195.6
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|++.+.||+|+||.||+|... +|+.||||+++... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 467899999999999999999976 68999999997542 222344678899999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
|||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+++..
T Consensus 227 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 299 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 299 (446)
T ss_dssp ECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTT
T ss_pred EeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceec
Confidence 99999999999997654 38999999999999999999998 7 9999999999999999999999999999754
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............ .
T Consensus 300 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--------~~~~~~~i~~~~-~--- 366 (446)
T 4ejn_A 300 IKDG-ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--------HEKLFELILMEE-I--- 366 (446)
T ss_dssp CC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C---
T ss_pred cCCC-cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC--------HHHHHHHHHhCC-C---
Confidence 3222 22344669999999999999999999999999999999999999995321 111111111111 0
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 562 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 562 (613)
. .+......+.+++..||+.||++|| +++|+++
T Consensus 367 ---~----~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 367 ---R----FPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ---C----CCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ---C----CCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 0 1112235788999999999999999 9999987
No 118
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=7.2e-41 Score=340.42 Aligned_cols=265 Identities=25% Similarity=0.345 Sum_probs=199.3
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc----ccHHHHHHHHHHHhhcc---cCccceeeEEEEc
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ----GGELQFQTEVEMISMAV---HRNLLRLRGFCMT 356 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~ 356 (613)
...++|++.+.||+|+||+||+|++. +|+.||||++...... .....+.+|+.+++.+. ||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 45678999999999999999999975 7899999998744321 12345667877777665 9999999999987
Q ss_pred CC-----ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcE
Q 007200 357 PT-----ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEA 431 (613)
Q Consensus 357 ~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~ 431 (613)
.. ..+++|||+. ++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 159 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTV 159 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCE
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCE
Confidence 55 4789999997 599999976543 2389999999999999999999999 99999999999999999999
Q ss_pred EEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007200 432 VVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 511 (613)
Q Consensus 432 kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 511 (613)
||+|||+++...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... .......+.
T Consensus 160 kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~ 232 (308)
T 3g33_A 160 KLADFGLARIYSYQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNS-----EADQLGKIF 232 (308)
T ss_dssp EECSCSCTTTSTTCC--CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSS-----HHHHHHHHH
T ss_pred EEeeCccccccCCCc--ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHH
Confidence 999999998654322 2344568999999999999999999999999999999999999995321 111222222
Q ss_pred HHhhcccccccc------cCccC--CC-----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 512 GLLKEKKLEQLV------DSDME--GN-----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 512 ~~~~~~~~~~~~------~~~~~--~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
............ ..... .. ...+....+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 233 DLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 111111000000 00000 00 00122367889999999999999999999987
No 119
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=343.97 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=189.9
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
..++|++.+.||+|+||+||+|++. +++.||||+++... ....+.+|+.++++++||||+++++++.++...++||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 3467999999999999999999987 58899999997543 2346788999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC---CCcEEEecccccee
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFGLAKL 441 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~DfGla~~ 441 (613)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.
T Consensus 128 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~ 200 (349)
T 2w4o_A 128 ELVTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKI 200 (349)
T ss_dssp CCCCSCBHHHHHTTCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC----
T ss_pred EeCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccc
Confidence 9999999999987643 389999999999999999999999 9999999999999975 88999999999986
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 442 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 442 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
.... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... .. ............ .
T Consensus 201 ~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~----~~---~~~~~~i~~~~~-~- 269 (349)
T 2w4o_A 201 VEHQ--VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER----GD---QFMFRRILNCEY-Y- 269 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT----CH---HHHHHHHHTTCC-C-
T ss_pred cCcc--cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc----cc---HHHHHHHHhCCC-c-
Confidence 5432 12234568999999999999999999999999999999999999995221 11 011111111110 0
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
. ...........+.+++.+||+.||++|||+.|+++.
T Consensus 270 ~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 270 F-----ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp C-----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred c-----CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 001112234578899999999999999999999873
No 120
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-41 Score=354.08 Aligned_cols=254 Identities=32% Similarity=0.479 Sum_probs=193.4
Q ss_pred CCCCCCccccCcCcEEEEEEeC--CC--CEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEc-CCceEEE
Q 007200 289 NFSNRNILGRGGFGKVYKGRLT--DG--SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT-PTERLLV 363 (613)
Q Consensus 289 ~~~~~~~ig~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv 363 (613)
.|...+.||+|+||+||+|.+. ++ ..||||.++..........+.+|+.++++++||||+++++++.+ +...++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3566788999999999999864 22 36899998765555556789999999999999999999998765 4578999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+++|+|.++++.... .+++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 170 ~e~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~ 243 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 243 (373)
T ss_dssp EECCTTCBHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EECCCCCCHHHHHhhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccc
Confidence 999999999999976432 488999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCc---eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 444 YKDTH---VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 444 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
..... ......+++.|+|||.+.+..++.++|||||||++|||+| |.+||.... .......+. .....
T Consensus 244 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~-----~~~~~~~~~---~~~~~ 315 (373)
T 3c1x_A 244 DKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLL---QGRRL 315 (373)
T ss_dssp --------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC-----SSCHHHHHH---TTCCC
T ss_pred ccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC-----HHHHHHHHH---cCCCC
Confidence 32211 1233447789999999999999999999999999999999 677775221 111111111 11110
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
. .+......+.+++.+||+.||++|||+.|+++.|+.
T Consensus 316 ---~-------~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~ 352 (373)
T 3c1x_A 316 ---L-------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 352 (373)
T ss_dssp ---C-------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---C-------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 0 011233578999999999999999999999999975
No 121
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.6e-41 Score=342.29 Aligned_cols=256 Identities=24% Similarity=0.357 Sum_probs=203.0
Q ss_pred HHhhCCCCCC-ccccCcCcEEEEEEeC---CCCEEEEEEeccccCcc-cHHHHHHHHHHHhhcccCccceeeEEEEcCCc
Q 007200 285 VATDNFSNRN-ILGRGGFGKVYKGRLT---DGSLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 359 (613)
Q Consensus 285 ~~~~~~~~~~-~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 359 (613)
+..++|.+.+ .||+|+||+||+|.+. +++.||||+++...... ....+.+|+.+++.++||||+++++++ ....
T Consensus 13 ~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~ 91 (291)
T 1xbb_A 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAES 91 (291)
T ss_dssp CCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSS
T ss_pred ecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCC
Confidence 3456777777 9999999999999643 46789999997654322 256789999999999999999999999 5677
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 164 (291)
T 1xbb_A 92 WMLVMEMAELGPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLS 164 (291)
T ss_dssp EEEEEECCTTEEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred cEEEEEeCCCCCHHHHHHhCc----CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcc
Confidence 899999999999999998643 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCcee--eccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhc
Q 007200 440 KLMDYKDTHVT--TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKE 516 (613)
Q Consensus 440 ~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 516 (613)
........... ....+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... . .+ +......
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~---~~-~~~~~~~ 235 (291)
T 1xbb_A 165 KALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----G---SE-VTAMLEK 235 (291)
T ss_dssp EECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC-----H---HH-HHHHHHT
T ss_pred eeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCC-----H---HH-HHHHHHc
Confidence 87754433222 22336788999999998889999999999999999999 999996321 1 11 1111111
Q ss_pred ccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 517 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
... . ..+......+.+++..||+.||++|||+.++++.|+.
T Consensus 236 ~~~-----~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 236 GER-----M----GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 276 (291)
T ss_dssp TCC-----C----CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCC-----C----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 110 0 1112234678999999999999999999999999975
No 122
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.5e-40 Score=338.30 Aligned_cols=261 Identities=21% Similarity=0.343 Sum_probs=198.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|.+.+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.+++.++||||+++++++.+++..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 357889999999999999999975 78999999997532 223345788999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+.+++|.+++.........+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999976433344589999999999999999999999 99999999999999999999999999998654
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.... ........... ......
T Consensus 188 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~-~~~~~~-- 257 (310)
T 2wqm_A 188 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK------MNLYSLCKKIE-QCDYPP-- 257 (310)
T ss_dssp ------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---------CCHHHHHHHHH-TTCSCC--
T ss_pred CCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc------hhHHHHHHHhh-cccCCC--
Confidence 3222 2233458999999999999999999999999999999999999995321 11112221111 111111
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
.. .......+.+++.+||+.||++|||+.++++.|+.
T Consensus 258 ---~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~ 294 (310)
T 2wqm_A 258 ---LP---SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKR 294 (310)
T ss_dssp ---CC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ---Cc---ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 00 11223578999999999999999999999999975
No 123
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=339.74 Aligned_cols=262 Identities=22% Similarity=0.288 Sum_probs=198.7
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc-cHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
++|.+.+.||+|+||+||+|.+. +|+.||+|++....... ....+.+|+.+++.++||||+++++++.++...++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 57888999999999999999986 58999999986654332 24568899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+.+++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~~~~l~~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 155 (311)
T 4agu_A 83 YCDHTVLHELDRYQR----GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP 155 (311)
T ss_dssp CCSEEHHHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred eCCCchHHHHHhhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc
Confidence 999999999886543 389999999999999999999999 9999999999999999999999999999876533
Q ss_pred CCceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh---------
Q 007200 446 DTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK--------- 515 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--------- 515 (613)
.. ......||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||.... .......+.....
T Consensus 156 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 229 (311)
T 4agu_A 156 SD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS-----DVDQLYLIRKTLGDLIPRHQQV 229 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCSCCHHHHHH
T ss_pred cc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhcccccccccc
Confidence 22 2234458999999999976 568999999999999999999999995322 1111111111110
Q ss_pred ---cccccccccCccCCCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 516 ---EKKLEQLVDSDMEGNYI-----EEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 516 ---~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.........+....... ......+.+++..||+.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 230 FSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp HHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00000000000000000 123456889999999999999999999987
No 124
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.6e-40 Score=334.65 Aligned_cols=262 Identities=27% Similarity=0.428 Sum_probs=197.0
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
+..++|.+.+.||+|+||+||+|++. ..||+|+++.... ......+.+|+.+++.++||||+++++++ .....++|
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv 97 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIV 97 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEE
Confidence 34578999999999999999999865 3599999976543 23345789999999999999999999965 55678999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+.+++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 98 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 98 TQWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEecCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccc
Confidence 99999999999996543 2489999999999999999999999 99999999999999999999999999997654
Q ss_pred CCC-Cceeeccccccccccccccc---cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 444 YKD-THVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 444 ~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
... ........||+.|+|||.+. +..++.++||||||+++|||++|+.||.... .. ..+.........
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~----~~~~~~~~~~~~ 243 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN----NR----DQIIEMVGRGSL 243 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC----CH----HHHHHHHHHTSC
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccc----hH----HHHHHHhccccc
Confidence 322 22233456899999999986 5678889999999999999999999996321 11 111222222111
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 568 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 568 (613)
..... ......+..+.+++.+||+.||++|||+.++++.|+...
T Consensus 244 ~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 244 SPDLS-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CCCTT-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred Ccchh-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 11100 111223467999999999999999999999999998653
No 125
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=374.11 Aligned_cols=253 Identities=24% Similarity=0.354 Sum_probs=200.7
Q ss_pred CCCCCC-ccccCcCcEEEEEEeC---CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 289 NFSNRN-ILGRGGFGKVYKGRLT---DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 289 ~~~~~~-~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
++.+.+ .||+|+||.||+|.+. ++..||||+++..........+.+|+.+++.++||||+++++++.. +..++||
T Consensus 336 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~ 414 (613)
T 2ozo_A 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVM 414 (613)
T ss_dssp SEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEE
T ss_pred ceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEE
Confidence 333334 7999999999999864 4567999999876555567789999999999999999999999976 5689999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+.+|+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 415 E~~~~g~L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp ECCTTCBHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred EeCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 9999999999997543 3489999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCce--eeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 445 KDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 445 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
..... .....+++.|+|||++.+..++.++|||||||++|||++ |+.||.... ...... .......
T Consensus 489 ~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----~~~~~~---~i~~~~~--- 557 (613)
T 2ozo_A 489 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK-----GPEVMA---FIEQGKR--- 557 (613)
T ss_dssp -------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----SHHHHH---HHHTTCC---
T ss_pred CCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC-----HHHHHH---HHHcCCC---
Confidence 32211 122335689999999999999999999999999999998 999996321 111111 1111111
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
...+..+...+.+++..||+.||++||++.+|++.|+.
T Consensus 558 -------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 558 -------MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp -------CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred -------CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 11122344679999999999999999999999999975
No 126
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=6.3e-41 Score=346.40 Aligned_cols=251 Identities=23% Similarity=0.322 Sum_probs=203.4
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCce
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 360 (613)
...++|...+.||+|+||+||+|+.. +|+.||+|+++... .......+..|..++..+ +||||+++++++.+....
T Consensus 17 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~ 96 (353)
T 2i0e_A 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 96 (353)
T ss_dssp --CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEE
T ss_pred CchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEE
Confidence 44578999999999999999999987 57899999997543 123355678899999887 799999999999999999
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
++||||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~ 169 (353)
T 2i0e_A 97 YFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK 169 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred EEEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence 99999999999999998654 389999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 441 LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 441 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+......... .
T Consensus 170 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~-~- 238 (353)
T 2i0e_A 170 ENIWD-GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHN-V- 238 (353)
T ss_dssp CCCCT-TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCC-C-
T ss_pred ccccC-CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhCC-C-
Confidence 54322 222345669999999999999999999999999999999999999996321 112222222111 0
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPK-----MSEVVR 562 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~ 562 (613)
. .+......+.+++..||..||++||+ +.++++
T Consensus 239 -----~----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 239 -----A----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp -----C----CCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred -----C----CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0 11123457889999999999999996 466654
No 127
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=6.3e-41 Score=340.02 Aligned_cols=249 Identities=26% Similarity=0.406 Sum_probs=206.9
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEec
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 366 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 366 (613)
+.|...+.||+|+||.||+|... +++.||||++...........+.+|+.+++.++||||+++++++.++...++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 56888999999999999999975 68999999997665555667899999999999999999999999999999999999
Q ss_pred ccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCCC
Q 007200 367 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD 446 (613)
Q Consensus 367 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~ 446 (613)
+++++|.+++... ++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 102 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 102 LGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp CTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred CCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 9999999998642 389999999999999999999999 99999999999999999999999999998765432
Q ss_pred CceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccCc
Q 007200 447 THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 526 (613)
Q Consensus 447 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (613)
. ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... .......... .. .+.
T Consensus 174 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~-~~-----~~~ 238 (303)
T 3a7i_A 174 I-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELH--------PMKVLFLIPK-NN-----PPT 238 (303)
T ss_dssp C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHH-SC-----CCC
T ss_pred c-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcC--------HHHHHHHhhc-CC-----CCC
Confidence 2 2234568999999999999999999999999999999999999995321 1111111111 11 011
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 527 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 527 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
... .....+.+++..||+.||++|||+.++++.
T Consensus 239 ~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 239 LEG----NYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CCS----SCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred Ccc----ccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111 123568999999999999999999999874
No 128
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.9e-40 Score=332.35 Aligned_cols=248 Identities=27% Similarity=0.407 Sum_probs=201.5
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
..++|.+.+.||+|+||.||+|.+. +++.||+|++..... ......+.+|+.+++.++||||+++++++.+....++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 3467899999999999999999976 577999999865432 1234568899999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+++|+|.+++.... ++++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 87 v~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~ 159 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHA 159 (279)
T ss_dssp EECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred EEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccC
Confidence 999999999999997654 389999999999999999999999 9999999999999999999999999998654
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ............
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~----- 223 (279)
T 3fdn_A 160 PSS---RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT--------YQETYKRISRVE----- 223 (279)
T ss_dssp -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTC-----
T ss_pred Ccc---cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc--------HHHHHHHHHhCC-----
Confidence 322 2234568999999999999999999999999999999999999996321 111111111110
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. .+......+.+++.+||+.||++|||+.|+++
T Consensus 224 --~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 224 --FT----FPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp --CC----CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred --CC----CCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 11112356889999999999999999999998
No 129
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.1e-40 Score=350.29 Aligned_cols=265 Identities=22% Similarity=0.322 Sum_probs=191.8
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcc-cCccceeeEEEEcCC--c
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPT--E 359 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~ 359 (613)
...++|.+.+.||+|+||.||+|.+. +|+.||||++..... ......+.+|+.++..+. ||||+++++++..++ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 34578999999999999999999976 789999999865432 233456788999999997 999999999997544 6
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++|||||. ++|.++++.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 156 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLS 156 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccc
Confidence 899999997 5899888763 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCC--------------------Cceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccc
Q 007200 440 KLMDYKD--------------------THVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARL 498 (613)
Q Consensus 440 ~~~~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~ 498 (613)
+...... ........||+.|+|||++.+ ..++.++|||||||++|||++|++||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~- 235 (388)
T 3oz6_A 157 RSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS- 235 (388)
T ss_dssp EESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-
T ss_pred ccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCC-
Confidence 8654211 112234569999999999986 678999999999999999999999995321
Q ss_pred cCCCcchHHHHHHHHhhccccccc---c------------------cCccCCCC------------cHHHHHHHHHHHHH
Q 007200 499 ANDDDVMLLDWVKGLLKEKKLEQL---V------------------DSDMEGNY------------IEEEVEQLIQVALL 545 (613)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~---~------------------~~~~~~~~------------~~~~~~~l~~li~~ 545 (613)
.......+...........+ . .......+ .......+.+++.+
T Consensus 236 ----~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ 311 (388)
T 3oz6_A 236 ----TMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDK 311 (388)
T ss_dssp ----HHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHH
T ss_pred ----HHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHH
Confidence 11111111111110000000 0 00000000 00123568899999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 007200 546 CTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 546 cl~~dP~~RPt~~evl~~ 563 (613)
||+.||++|||++|+++.
T Consensus 312 ~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 312 LLQFNPNKRISANDALKH 329 (388)
T ss_dssp HCCSSGGGSCCHHHHTTS
T ss_pred hhccCcccCCCHHHHhCC
Confidence 999999999999999874
No 130
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.6e-41 Score=346.80 Aligned_cols=257 Identities=26% Similarity=0.431 Sum_probs=203.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEE--EEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLV--AVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 362 (613)
.++|...+.||+|+||.||+|++. ++..+ |+|.++..........+.+|++++.++ +||||+++++++.+....++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 367888999999999999999976 56644 999987654444556789999999999 89999999999999999999
Q ss_pred EEecccCCcchhhhhccC------------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc
Q 007200 363 VYPFMVNGSVASCLRERG------------QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 430 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~ 430 (613)
||||+++|+|.+++.... .....+++..++.++.||+.||+|||++ +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 999999999999997653 2234589999999999999999999999 9999999999999999999
Q ss_pred EEEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHH
Q 007200 431 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDW 509 (613)
Q Consensus 431 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~ 509 (613)
+||+|||+++...... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+.
T Consensus 181 ~kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~--------~~~~ 250 (327)
T 1fvr_A 181 AKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT--------CAEL 250 (327)
T ss_dssp EEECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHH
T ss_pred EEEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc--------HHHH
Confidence 9999999997432211 1223346889999999998889999999999999999998 999995322 1111
Q ss_pred HHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 510 VKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
......... . .........+.+++.+||+.||++|||+.++++.|+.
T Consensus 251 ~~~~~~~~~------~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 297 (327)
T 1fvr_A 251 YEKLPQGYR------L----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 297 (327)
T ss_dssp HHHGGGTCC------C----CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHhhcCCC------C----CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 111111100 0 1111233578999999999999999999999999874
No 131
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-40 Score=339.42 Aligned_cols=269 Identities=23% Similarity=0.340 Sum_probs=203.0
Q ss_pred HHHHHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhh--cccCccceeeEEEEcC
Q 007200 280 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM--AVHRNLLRLRGFCMTP 357 (613)
Q Consensus 280 ~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~ 357 (613)
........++|.+.+.||+|+||.||+|++. |+.||||++.... ...+..|.+++.. ++||||+++++++...
T Consensus 29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 103 (337)
T 3mdy_A 29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE----EASWFRETEIYQTVLMRHENILGFIAADIKG 103 (337)
T ss_dssp HHHHTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEES
T ss_pred cccccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc----cchhhhHHHHHHHHhhcCCCeeeEEEEEccC
Confidence 3444556688999999999999999999986 8999999985432 3344555555554 4899999999999877
Q ss_pred ----CceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCceeecCC
Q 007200 358 ----TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC-----DPKIIHRDVKAANILLDEE 428 (613)
Q Consensus 358 ----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~-----~~~ivH~Dlk~~NIll~~~ 428 (613)
...++||||+++|+|.++++.. .+++..+..++.|++.||+|||+++ .++|+||||||+||+++.+
T Consensus 104 ~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~ 178 (337)
T 3mdy_A 104 TGSWTQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN 178 (337)
T ss_dssp CGGGCEEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred CCCCCceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC
Confidence 6789999999999999999764 3899999999999999999999762 3389999999999999999
Q ss_pred CcEEEeccccceecCCCCCce---eeccccccccccccccccCCCCCc------ccchhHHHHHHHHHhC----------
Q 007200 429 FEAVVGDFGLAKLMDYKDTHV---TTAVRGTIGHIAPEYLSTGKSSEK------TDVFGYGVMLLELITG---------- 489 (613)
Q Consensus 429 ~~~kl~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~DVwS~G~il~elltg---------- 489 (613)
+.+||+|||+++......... .....||+.|+|||.+.+...+.+ +|||||||++|||+||
T Consensus 179 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~ 258 (337)
T 3mdy_A 179 GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEY 258 (337)
T ss_dssp SCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCC
T ss_pred CCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccc
Confidence 999999999998664332221 124469999999999988776665 9999999999999999
Q ss_pred CCCcccccccCCCcchHHHHHHHHhhcccccccccCccCC-CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 490 QRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG-NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 490 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
+.||....... .....+......... .+.... .....+...+.+++.+||+.||++|||+.|+++.|+.
T Consensus 259 ~~p~~~~~~~~----~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 328 (337)
T 3mdy_A 259 QLPYHDLVPSD----PSYEDMREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAK 328 (337)
T ss_dssp CCTTTTTSCSS----CCHHHHHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred cccHhhhcCCC----CchhhhHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHH
Confidence 55553221111 111112222211111 111111 1123667889999999999999999999999999975
No 132
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.7e-40 Score=330.45 Aligned_cols=246 Identities=22% Similarity=0.335 Sum_probs=180.8
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
++|.+.+.||+|+||.||+|.+. +|+.||+|++..... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 57999999999999999999965 789999999976532 223557889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+ ++++.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+|||++.....
T Consensus 93 e~~-~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 164 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD 164 (275)
T ss_dssp ECC-CEEHHHHHHTSS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC-----
T ss_pred hhc-CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccC
Confidence 999 778888876543 389999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCceeeccccccccccccccccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.. ......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||.... ............ .
T Consensus 165 ~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~-~---- 229 (275)
T 2eue_A 165 GN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES--------IPVLFKNISNGV-Y---- 229 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTC-C----
T ss_pred cc--cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCC-C----
Confidence 22 2233458999999999988765 789999999999999999999996321 111111111111 0
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. .+......+.+++.+||+.||++|||+.|+++
T Consensus 230 --~----~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 230 --T----LPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp --C----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --C----CCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 0 11122356889999999999999999999986
No 133
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.1e-41 Score=339.67 Aligned_cols=255 Identities=27% Similarity=0.385 Sum_probs=201.7
Q ss_pred CCCCCCccccCcCcEEEEEEeC-CC---CEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCce-EEE
Q 007200 289 NFSNRNILGRGGFGKVYKGRLT-DG---SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER-LLV 363 (613)
Q Consensus 289 ~~~~~~~ig~G~~g~V~~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~lv 363 (613)
.|...+.||+|+||+||+|.+. ++ ..+|+|.+...........+.+|+.+++.++||||+++++++.+.+.. +++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 3555688999999999999854 22 379999998665555566789999999999999999999999876655 999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+.+|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 175 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQ---RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDIL 175 (298)
T ss_dssp ECCCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTT
T ss_pred EecccCCCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCccccc
Confidence 99999999999997643 3489999999999999999999999 99999999999999999999999999997654
Q ss_pred CCC---CceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 444 YKD---THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 444 ~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
... ........+++.|+|||.+.+..++.++||||||+++|+|++|..|+... .........+.. ...
T Consensus 176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~----~~~~~~~~~~~~---~~~-- 246 (298)
T 3pls_A 176 DREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRH----IDPFDLTHFLAQ---GRR-- 246 (298)
T ss_dssp TGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTT----SCGGGHHHHHHT---TCC--
T ss_pred CCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCcc----CCHHHHHHHhhc---CCC--
Confidence 322 11223345788999999999999999999999999999999966554311 111112221111 110
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
...+......+.+++..||+.||++|||+.++++.|+.
T Consensus 247 --------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 247 --------LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp --------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred --------CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 00111223578999999999999999999999999975
No 134
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4e-41 Score=353.43 Aligned_cols=252 Identities=21% Similarity=0.311 Sum_probs=198.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccC-cccHHHHHHHHHHHhhcc--cCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT-QGGELQFQTEVEMISMAV--HRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv 363 (613)
.++|.+.+.||+|+||+||+|...+++.||||++..... ......+.+|+.++..+. ||||+++++++..+...++|
T Consensus 55 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 134 (390)
T 2zmd_A 55 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 134 (390)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEE
Confidence 356999999999999999999988899999999875432 333467899999999996 59999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|| +.+++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ ++.+||+|||+++...
T Consensus 135 ~E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~ 205 (390)
T 2zmd_A 135 ME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ 205 (390)
T ss_dssp EE-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred Ee-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence 99 67889999998654 388999999999999999999999 999999999999996 5799999999998765
Q ss_pred CCCCc-eeecccccccccccccccc-----------CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007200 444 YKDTH-VTTAVRGTIGHIAPEYLST-----------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 511 (613)
Q Consensus 444 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 511 (613)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .....+.
T Consensus 206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-------~~~~~~~ 278 (390)
T 2zmd_A 206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQISKLH 278 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-------CHHHHHH
T ss_pred CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-------HHHHHHH
Confidence 33221 2344569999999999865 368899999999999999999999995211 1112222
Q ss_pred HHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 512 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
....... ....+......+.+++..||+.||++|||+.|+++.
T Consensus 279 ~~~~~~~---------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 AIIDPNH---------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHCTTS---------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCccc---------cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 2221111 111111113568899999999999999999999874
No 135
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=343.27 Aligned_cols=264 Identities=27% Similarity=0.344 Sum_probs=205.5
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEE----cCCc
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM----TPTE 359 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~ 359 (613)
+..++|.+.+.||+|+||.||++... +|+.||||++.... ......+.+|+.+++.++||||+++++++. ....
T Consensus 26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (317)
T 2buj_A 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHE 104 (317)
T ss_dssp ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEE
T ss_pred ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCce
Confidence 34578999999999999999999974 78999999986532 334567889999999999999999999987 3357
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||||+.+|+|.+++........++++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 105 AWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred eEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 7999999999999999987543445699999999999999999999999 9999999999999999999999999998
Q ss_pred eecCCCCCc--------eeeccccccccccccccccCC---CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHH
Q 007200 440 KLMDYKDTH--------VTTAVRGTIGHIAPEYLSTGK---SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 508 (613)
Q Consensus 440 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~---~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~ 508 (613)
......... ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||......... ...
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~ 258 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDS---VAL 258 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSC---HHH
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccch---hhH
Confidence 765321110 012234799999999987654 688999999999999999999999632211110 111
Q ss_pred HHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 007200 509 WVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 568 (613)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 568 (613)
.+ ... ............+.+++.+||+.||++|||+.++++.|+.+.
T Consensus 259 ~~----~~~---------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~ 305 (317)
T 2buj_A 259 AV----QNQ---------LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305 (317)
T ss_dssp HH----HCC-----------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTC
T ss_pred Hh----hcc---------CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcC
Confidence 11 000 000011122357899999999999999999999999998653
No 136
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.1e-40 Score=330.64 Aligned_cols=252 Identities=20% Similarity=0.282 Sum_probs=204.4
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
.++|.+.+.||+|+||.||+|.+. +|+.||+|++..... ......+.+|+.+++.++||||+++++++.++...++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999976 689999999976543 233456889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc---EEEecccccee
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKL 441 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~DfGla~~ 441 (613)
||+.+++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||++..
T Consensus 85 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 9999999999887653 389999999999999999999999 9999999999999986655 99999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 442 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 442 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
..... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||.... . ......... ....
T Consensus 158 ~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~---~~~~~~~~~-~~~~- 225 (284)
T 3kk8_A 158 VNDSE--AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED-----Q---HRLYAQIKA-GAYD- 225 (284)
T ss_dssp CCSSC--BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----H---HHHHHHHHH-TCCC-
T ss_pred cccCc--cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc-----h---hHHHHHHHh-cccc-
Confidence 65332 2234568999999999999999999999999999999999999995221 1 111111111 1110
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... .........+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 226 YPS-----PEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp CCT-----TTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CCc-----hhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 000 001122356889999999999999999999987
No 137
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=7e-41 Score=345.05 Aligned_cols=252 Identities=20% Similarity=0.297 Sum_probs=200.4
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceEEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 363 (613)
..++|++.+.||+|+||+||+|.+. +|+.||||++...... ..+|++++.++ +||||+++++++.++...++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~-----~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD-----PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC-----CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC-----hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 3567999999999999999999987 6889999999765432 34688888877 799999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC----CcEEEeccccc
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE----FEAVVGDFGLA 439 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~----~~~kl~DfGla 439 (613)
|||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+..+ +.+||+|||++
T Consensus 95 ~E~~~gg~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a 167 (342)
T 2qr7_A 95 TELMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFA 167 (342)
T ss_dssp ECCCCSCBHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence 99999999999997643 389999999999999999999999 99999999999998543 35999999999
Q ss_pred eecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 440 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 440 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .....+....... ...
T Consensus 168 ~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~~~~i~~-~~~ 240 (342)
T 2qr7_A 168 KQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP-----DDTPEEILARIGS-GKF 240 (342)
T ss_dssp EECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST-----TSCHHHHHHHHHH-CCC
T ss_pred ccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC-----cCCHHHHHHHHcc-CCc
Confidence 87654332 2334568999999999988889999999999999999999999996321 1111222222211 111
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. ............+.+++.+||..||++|||+.++++
T Consensus 241 ~------~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 S------LSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp C------CCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred c------cCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1 011111223467889999999999999999999886
No 138
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.6e-42 Score=342.00 Aligned_cols=257 Identities=21% Similarity=0.340 Sum_probs=205.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEc--CCceEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTERLL 362 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 362 (613)
.++|++.+.||+|+||.||+|... +|+.||+|.+..... ......+.+|+.+++.++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 367888999999999999999986 689999999975442 3345578999999999999999999998754 567899
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEecCCCCCceeecCCCcEEEeccc
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK-----IIHRDVKAANILLDEEFEAVVGDFG 437 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~-----ivH~Dlk~~NIll~~~~~~kl~DfG 437 (613)
||||+++++|.+++.........+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 9999999999999976544445599999999999999999999999 7 9999999999999999999999999
Q ss_pred cceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc
Q 007200 438 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 517 (613)
Q Consensus 438 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
+++....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... . .+.... +...
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~---~~~~~~-i~~~ 231 (279)
T 2w5a_A 162 LARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS-----Q---KELAGK-IREG 231 (279)
T ss_dssp HHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS-----H---HHHHHH-HHHT
T ss_pred hheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC-----H---HHHHHH-Hhhc
Confidence 9976543221 1223458999999999999899999999999999999999999996321 1 111111 1111
Q ss_pred cccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhh
Q 007200 518 KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLE 565 (613)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 565 (613)
... .. +......+.+++.+||+.||++|||+.|+++.+.
T Consensus 232 ~~~-----~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 232 KFR-----RI----PYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCC-----CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred ccc-----cC----CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 111 11 1123357899999999999999999999999764
No 139
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4e-41 Score=347.83 Aligned_cols=247 Identities=29% Similarity=0.422 Sum_probs=199.6
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc--ccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
+.|...+.||+|+||+||+|+.. +|+.||||++...... .....+.+|+++++.++||||+++++++.++...++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 45888899999999999999975 7899999999754332 22346889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+. |+|.+++.... .++++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+|||+++....
T Consensus 134 e~~~-g~l~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp ECCS-EEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred ecCC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 9997 67888776543 2489999999999999999999999 999999999999999999999999999976543
Q ss_pred CCCceeeccccccccccccccc---cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
. ....||+.|+|||.+. +..++.++|||||||++|||++|+.||.... ....+........
T Consensus 207 ~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~--------~~~~~~~~~~~~~--- 270 (348)
T 1u5q_A 207 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--------AMSALYHIAQNES--- 270 (348)
T ss_dssp B-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSCC---
T ss_pred C-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHHhcCC---
Confidence 2 2346999999999985 5678999999999999999999999995221 1122222222111
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
+... .......+.+++.+||+.||++|||+.++++.
T Consensus 271 ---~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 271 ---PALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp ---CCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred ---CCCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0000 11223568899999999999999999999874
No 140
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.6e-41 Score=347.54 Aligned_cols=267 Identities=18% Similarity=0.213 Sum_probs=199.8
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC----CCCEEEEEEeccccCcc----------cHHHHHHHHHHHhhcccCccceeeE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERTQG----------GELQFQTEVEMISMAVHRNLLRLRG 352 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~l~h~niv~l~~ 352 (613)
.++|.+.+.||+|+||+||+|.+. ++..+|||++....... ....+.+|+..+..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 367889999999999999999976 57789999987543221 1123567888899999999999999
Q ss_pred EEEc----CCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC
Q 007200 353 FCMT----PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE 428 (613)
Q Consensus 353 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~ 428 (613)
++.. ....++||||+ +++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccC
Confidence 9987 67889999999 999999997654 489999999999999999999999 99999999999999988
Q ss_pred C--cEEEeccccceecCCCCCc------eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccC
Q 007200 429 F--EAVVGDFGLAKLMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN 500 (613)
Q Consensus 429 ~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~ 500 (613)
+ .+||+|||+++.+...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~--- 264 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNL--- 264 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGT---
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccc---
Confidence 7 9999999999876432211 1134469999999999999999999999999999999999999995221
Q ss_pred CCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCc
Q 007200 501 DDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 569 (613)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 569 (613)
...................... .... .......+.+++..||+.||++|||+.+|++.|+...+
T Consensus 265 -~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 265 -KDPVAVQTAKTNLLDELPQSVL-KWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp -TCHHHHHHHHHHHHHTTTHHHH-HHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred -cccHHHHHHHHhhcccccHHHH-hhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111111111111111100000 0000 00123579999999999999999999999999987543
No 141
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=4.5e-41 Score=340.16 Aligned_cols=255 Identities=32% Similarity=0.464 Sum_probs=200.9
Q ss_pred hCCCCCCccccCcCcEEEEEEeCC----CCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEE-cCCceEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM-TPTERLL 362 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~l 362 (613)
.+|...+.||+|+||+||+|.+.+ ...+|+|.+...........+.+|+.++++++||||+++++++. .+...++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 457788999999999999998652 23589999987655555677999999999999999999999865 4567899
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+.+|+|.++++... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 105 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccc
Confidence 999999999999997643 2489999999999999999999999 9999999999999999999999999999866
Q ss_pred CCCCC---ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhccc
Q 007200 443 DYKDT---HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKK 518 (613)
Q Consensus 443 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (613)
..... .......+|+.|+|||.+.+..++.++||||||+++|||++ |.+||.... .......+. ....
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~-----~~~~~~~~~---~~~~ 250 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-----TFDITVYLL---QGRR 250 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC-----TTTHHHHHH---TTCC
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC-----HHHHHHHHh---cCCC
Confidence 43221 12233457889999999999999999999999999999999 555664221 111111111 1110
Q ss_pred ccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 519 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
. . .+......+.+++.+||+.||++|||+.|+++.|+.
T Consensus 251 ~------~----~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 288 (298)
T 3f66_A 251 L------L----QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288 (298)
T ss_dssp C------C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred C------C----CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 0 0 011123568999999999999999999999999975
No 142
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1e-40 Score=341.45 Aligned_cols=253 Identities=22% Similarity=0.290 Sum_probs=206.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc-----cHHHHHHHHHHHhhcccCccceeeEEEEcCCce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-----GELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 360 (613)
.++|.+.+.||+|+||.||+|.+. +|+.||+|.++...... ....+.+|+.++..++||||+++++++.+....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 467899999999999999999986 68999999997543322 356789999999999999999999999999999
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC----cEEEecc
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF----EAVVGDF 436 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~Df 436 (613)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 99999999999999997643 489999999999999999999999 999999999999999888 7999999
Q ss_pred ccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhc
Q 007200 437 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 516 (613)
Q Consensus 437 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 516 (613)
|+++...... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+.+......
T Consensus 164 g~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~ 233 (321)
T 2a2a_A 164 GLAHEIEDGV--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT--------KQETLANITSV 233 (321)
T ss_dssp TTCEECCTTC--CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS--------HHHHHHHHHTT
T ss_pred ccceecCccc--cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhc
Confidence 9998765432 2234458999999999999999999999999999999999999995321 11111111111
Q ss_pred ccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 517 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
.. ...+.. .......+.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~---~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 234 SY---DFDEEF----FSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp CC---CCCHHH----HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred cc---ccChhh----hcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 000000 01123568899999999999999999999873
No 143
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=333.58 Aligned_cols=249 Identities=25% Similarity=0.421 Sum_probs=183.5
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
++|.+.+.||+|+||.||+|+.. +|+.||+|++..... ......+.+|+.+++.++||||+++++++.+....++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 56888999999999999999975 789999999965421 123457889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+++++|.+++.... .++++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 91 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~ 164 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164 (278)
T ss_dssp ECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred ecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccC
Confidence 9999999999997643 2489999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 524 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (613)
.... .....|++.|+|||.+.+..++.++||||||+++|||++|+.||........ .. ....
T Consensus 165 ~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--------~~---------~~~~ 226 (278)
T 3cok_A 165 PHEK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNT--------LN---------KVVL 226 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------CCS
T ss_pred CCCc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHH--------HH---------HHhh
Confidence 3222 2334589999999999988999999999999999999999999963321100 00 0000
Q ss_pred CccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 525 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 525 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... ..+......+.+++.+||+.||++|||+.++++
T Consensus 227 ~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 227 ADY--EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SCC--CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ccc--CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 000 011122357889999999999999999999987
No 144
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.6e-42 Score=348.90 Aligned_cols=262 Identities=23% Similarity=0.319 Sum_probs=188.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhh--cccCccceeeEEEEcCC----ce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM--AVHRNLLRLRGFCMTPT----ER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~ 360 (613)
.++|.+.+.||+|+||.||+|++. |+.||||++... ....+..|.+++.. ++||||+++++++.... ..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 367999999999999999999875 899999998643 34456778888876 78999999999998776 78
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCceeecCCCcEE
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH--------DHCDPKIIHRDVKAANILLDEEFEAV 432 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~NIll~~~~~~k 432 (613)
++||||+++|+|.++++.. .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+|
T Consensus 77 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~k 148 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCC 148 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-
T ss_pred EEEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEE
Confidence 9999999999999999764 2778889999999999999999 77 999999999999999999999
Q ss_pred EeccccceecCCCCCce---eeccccccccccccccccC------CCCCcccchhHHHHHHHHHhC----------CCCc
Q 007200 433 VGDFGLAKLMDYKDTHV---TTAVRGTIGHIAPEYLSTG------KSSEKTDVFGYGVMLLELITG----------QRAF 493 (613)
Q Consensus 433 l~DfGla~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~DVwS~G~il~elltg----------~~p~ 493 (613)
|+|||+++......... .....||+.|+|||.+.+. .++.++|||||||++|||++| +.||
T Consensus 149 l~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~ 228 (303)
T 3gxj_A 149 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 228 (303)
T ss_dssp BCCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTT
T ss_pred EeecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccc
Confidence 99999997665433221 2334699999999999776 344689999999999999999 5555
Q ss_pred ccccccCCCcchHHHHHHHHhhcccccccccCccCCC-CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCc
Q 007200 494 DLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGN-YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL 569 (613)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 569 (613)
.............. ....... ..+..... ...+....+.+++.+||+.||++|||+.++++.|+.+..
T Consensus 229 ~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 229 YDLVPSDPSVEEMR----KVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp TTTCC-CCCCC-CH----HHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred cccCCCCccHHHHH----HHHHHhh----cCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 32211111100001 1111111 11111111 122566789999999999999999999999999987643
No 145
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.5e-41 Score=345.21 Aligned_cols=244 Identities=23% Similarity=0.286 Sum_probs=202.2
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc-------cHHHHHHHHHHHhhcccCccceeeEEEEcC
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-------GELQFQTEVEMISMAVHRNLLRLRGFCMTP 357 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 357 (613)
..++|.+.+.||+|+||+||+|.+. +++.||||+++...... ....+.+|+.+++.++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 3568999999999999999999975 68899999997653211 223467899999999999999999999999
Q ss_pred CceEEEEecccCC-cchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecc
Q 007200 358 TERLLVYPFMVNG-SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 436 (613)
Q Consensus 358 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 436 (613)
...++||||+.+| +|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP----RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 9999987643 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCceeeccccccccccccccccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh
Q 007200 437 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 515 (613)
Q Consensus 437 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 515 (613)
|+++....... .....||+.|+|||.+.+..+ +.++|||||||++|||++|+.||......
T Consensus 175 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---------------- 236 (335)
T 3dls_A 175 GSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET---------------- 236 (335)
T ss_dssp TTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG----------------
T ss_pred ccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH----------------
Confidence 99987654322 234569999999999988876 88999999999999999999999532100
Q ss_pred cccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 516 EKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
....... + ......+.+++..||+.||++|||+.++++.
T Consensus 237 ---~~~~~~~--~----~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 237 ---VEAAIHP--P----YLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp ---TTTCCCC--S----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ---HhhccCC--C----cccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 0 1123568999999999999999999999985
No 146
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=3.6e-40 Score=353.10 Aligned_cols=247 Identities=24% Similarity=0.396 Sum_probs=204.0
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
++|.+.+.||+|+||.||+|++. +|+.||||++..... ......+.+|+.+++.++||||+++++++.++...++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 57888999999999999999987 799999999975432 123457889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+++|+|.+++...+ .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 96 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 96 EYVSGGELFDYICKNG----RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp ECCSSEEHHHHTTSSS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 9999999999997543 389999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeccccccccccccccccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.. ......||+.|+|||.+.+..+ +.++|||||||++|||++|+.||+... . ........... .
T Consensus 169 ~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~---~~~~~~i~~~~-~---- 233 (476)
T 2y94_A 169 GE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-----V---PTLFKKICDGI-F---- 233 (476)
T ss_dssp TC--CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----S---HHHHHHHHTTC-C----
T ss_pred cc--cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-----H---HHHHHHHhcCC-c----
Confidence 22 2334569999999999988765 689999999999999999999996321 1 11111111111 0
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. +......+.+++..||+.||++|||+.|+++
T Consensus 234 --~~----p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 234 --YT----PQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp --CC----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --CC----CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 00 1112356889999999999999999999987
No 147
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3e-40 Score=344.44 Aligned_cols=246 Identities=22% Similarity=0.261 Sum_probs=194.9
Q ss_pred CCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEecccCCc
Q 007200 293 RNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVNGS 371 (613)
Q Consensus 293 ~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 371 (613)
.+.||+|+||.||+|... +|+.||+|+++.... .....+.+|++++++++||||+++++++.+....++||||+++++
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 567999999999999975 689999999976432 245678999999999999999999999999999999999999999
Q ss_pred chhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee--cCCCcEEEeccccceecCCCCCce
Q 007200 372 VASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL--DEEFEAVVGDFGLAKLMDYKDTHV 449 (613)
Q Consensus 372 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll--~~~~~~kl~DfGla~~~~~~~~~~ 449 (613)
|.+++.... ..+++..+..++.||++||+|||+. +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 173 L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-- 244 (373)
T 2x4f_A 173 LFDRIIDES---YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-- 244 (373)
T ss_dssp EHHHHHHTG---GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--
T ss_pred HHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--
Confidence 999886543 2389999999999999999999999 99999999999999 5678999999999987654322
Q ss_pred eeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccCccCC
Q 007200 450 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEG 529 (613)
Q Consensus 450 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (613)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ..+.+......... ....
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~--------~~~~~~~i~~~~~~---~~~~--- 310 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN--------DAETLNNILACRWD---LEDE--- 310 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTCCC---SCSG---
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhccCC---CChh---
Confidence 233459999999999998889999999999999999999999996321 11222222221110 0000
Q ss_pred CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 530 NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 530 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
........+.+++.+||+.||++|||+.|+++
T Consensus 311 -~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 311 -EFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 01122357899999999999999999999998
No 148
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.7e-40 Score=332.31 Aligned_cols=250 Identities=20% Similarity=0.239 Sum_probs=202.8
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|.+.+.||+|+||.||+|.+. ++..+|+|++...... ....+.+|+++++.++||||+++++++.+....++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE-DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS-CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc-hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 467899999999999999999977 5779999998765433 45678999999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEeccccceec
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfGla~~~ 442 (613)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||++...
T Consensus 87 ~~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 87 LCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp CCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred ccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 999999999987654 389999999999999999999999 99999999999999 78899999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
.... ......||+.|+|||.+.+ .++.++||||||+++|||++|+.||.... ..+.......... . .
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~~~-~-~ 226 (277)
T 3f3z_A 160 KPGK--MMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPT--------DSEVMLKIREGTF-T-F 226 (277)
T ss_dssp CTTS--CBCCCCSCTTTCCHHHHTT-CBCTTHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCC-C-C
T ss_pred cCcc--chhccCCCCCccChHHhcc-cCCchhhehhHHHHHHHHHHCCCCCCCCC--------HHHHHHHHHhCCC-C-C
Confidence 5332 2234459999999999865 48999999999999999999999996322 1111111111110 0 0
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... ........+.+++.+|++.||++|||+.++++
T Consensus 227 ~~~-----~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 227 PEK-----DWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp CHH-----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred Cch-----hhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 00012357899999999999999999999976
No 149
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2e-40 Score=345.12 Aligned_cols=264 Identities=23% Similarity=0.288 Sum_probs=201.4
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc--ccHHHHHHHHHH-HhhcccCccceeeEEEEcCCceEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEM-ISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
.++|+..+.||+|+||+||+|+.. +++.||+|+++..... .....+..|..+ ++.++||||+++++++.+....++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 367889999999999999999987 6889999999765422 223345667666 567899999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+.+|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 117 v~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 999999999999997654 388999999999999999999999 9999999999999999999999999999854
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+......... .
T Consensus 190 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--------~~~~~~~i~~~~-~--- 256 (373)
T 2r5t_A 190 IEH-NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN--------TAEMYDNILNKP-L--- 256 (373)
T ss_dssp BCC-CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB--------HHHHHHHHHHSC-C---
T ss_pred ccC-CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhcc-c---
Confidence 322 223345679999999999999999999999999999999999999996322 112222222111 0
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCCc--chhhHHHh
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDGL--AERWEEWQ 577 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~--~~~~~~~~ 577 (613)
.. .......+.+++.+||+.||++||++.+.++.+....+ .-+|+...
T Consensus 257 ---~~----~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~~l~ 306 (373)
T 2r5t_A 257 ---QL----KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLI 306 (373)
T ss_dssp ---CC----CSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHHHHH
T ss_pred ---CC----CCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHHHHH
Confidence 01 11123568899999999999999998765555544322 12355543
No 150
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.6e-41 Score=348.31 Aligned_cols=265 Identities=27% Similarity=0.371 Sum_probs=209.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEe-----CCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEc--CCc
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTE 359 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~ 359 (613)
.++|...+.||+|+||.||+|++ .+++.||||++.... ......+.+|+++++.++||||+++++++.. ...
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 100 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQS 100 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCce
Confidence 36788899999999999999984 368899999997543 3344568999999999999999999999874 466
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||||+++++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 174 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLA 174 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGC
T ss_pred EEEEEeecCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccc
Confidence 8899999999999999976432 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCc--eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCccccccc------CCCcchHHHHHH
Q 007200 440 KLMDYKDTH--VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA------NDDDVMLLDWVK 511 (613)
Q Consensus 440 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~------~~~~~~~~~~~~ 511 (613)
+........ ......||..|+|||.+.+..++.++||||||+++|+|++|+.||...... ..........+.
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3lxl_A 175 KLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLL 254 (327)
T ss_dssp EECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHH
T ss_pred eecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHH
Confidence 877543322 122344788899999999999999999999999999999999999633210 000001111111
Q ss_pred HHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 512 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
.... ..............+.+++..||+.||++|||+.|+++.|+..
T Consensus 255 ~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 301 (327)
T 3lxl_A 255 ELLE---------EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301 (327)
T ss_dssp HHHH---------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC
T ss_pred HHhh---------cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1111 1111112223446789999999999999999999999999875
No 151
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=340.84 Aligned_cols=254 Identities=27% Similarity=0.437 Sum_probs=196.4
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEec
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 366 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 366 (613)
.++|++.+.||+|+||+||+|++. ++.||||.+... .....+.+|+.++++++||||+++++++. +..++||||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~ 80 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEY 80 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEEC
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEc
Confidence 357888899999999999999986 788999998643 23567899999999999999999999876 457999999
Q ss_pred ccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc-EEEeccccceecCCC
Q 007200 367 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE-AVVGDFGLAKLMDYK 445 (613)
Q Consensus 367 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-~kl~DfGla~~~~~~ 445 (613)
+++|+|.++++.... ...+++..+..++.|+++||+|||+....+|+||||||+||+++.++. +||+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 81 AEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CTTCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred CCCCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 999999999976532 224789999999999999999999932128999999999999998886 799999999755322
Q ss_pred CCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccC
Q 007200 446 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDS 525 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (613)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||.... .. ............. +
T Consensus 160 ----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~--~~~~~~~~~~~~~------~ 223 (307)
T 2eva_A 160 ----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIG----GP--AFRIMWAVHNGTR------P 223 (307)
T ss_dssp ---------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTC----SS--HHHHHHHHHTTCC------C
T ss_pred ----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhC----cc--HHHHHHHHhcCCC------C
Confidence 223458999999999999999999999999999999999999996321 11 1111111111110 1
Q ss_pred ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 526 DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 526 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
. ........+.+++.+||+.||++|||+.++++.|+..
T Consensus 224 ~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 224 P----LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261 (307)
T ss_dssp C----CBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred C----cccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 1 1112235688999999999999999999999999853
No 152
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.2e-40 Score=355.83 Aligned_cols=253 Identities=26% Similarity=0.359 Sum_probs=206.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|...+.||+|+||.||+|+.. +|+.||+|++..... ......+..|+.+++.++||||+++++++.+....++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 367888899999999999999986 699999999975432 22345788999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+++|+|.+++.........+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++...
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 999999999999987654455699999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............... .
T Consensus 341 ~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~----~~~~~~~~~~i~~~~-~---- 410 (543)
T 3c4z_A 341 AGQT-KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE----KVENKELKQRVLEQA-V---- 410 (543)
T ss_dssp TTCC-CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC----CCCHHHHHHHHHHCC-C----
T ss_pred CCCc-ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCcc----chhHHHHHHHHhhcc-c----
Confidence 4322 23345799999999999999999999999999999999999999963321 111122222222111 0
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMS 558 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ 558 (613)
.++......+.+++..||+.||++||++.
T Consensus 411 ------~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 411 ------TYPDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp ------CCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred ------CCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 01122345788999999999999999763
No 153
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=348.45 Aligned_cols=269 Identities=25% Similarity=0.351 Sum_probs=197.9
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHH--HhhcccCccceeeEEEEc-----CC
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEM--ISMAVHRNLLRLRGFCMT-----PT 358 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~-----~~ 358 (613)
..++|.+.+.||+|+||+||+|+. +++.||||++.... ...+..|.++ +..++||||+++++.+.. ..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 346788999999999999999987 58999999986432 2334444444 556899999999986542 23
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCceeecCCCcEE
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC------DPKIIHRDVKAANILLDEEFEAV 432 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------~~~ivH~Dlk~~NIll~~~~~~k 432 (613)
..++||||+++|+|.+++.... .++..+..++.||++||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 160 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCV 160 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEE
T ss_pred eEEEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEE
Confidence 5689999999999999997643 588999999999999999999873 23899999999999999999999
Q ss_pred EeccccceecCCCC-------Cceeecccccccccccccccc-------CCCCCcccchhHHHHHHHHHhCCCCcccccc
Q 007200 433 VGDFGLAKLMDYKD-------THVTTAVRGTIGHIAPEYLST-------GKSSEKTDVFGYGVMLLELITGQRAFDLARL 498 (613)
Q Consensus 433 l~DfGla~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DVwS~G~il~elltg~~p~~~~~~ 498 (613)
|+|||+++...... ........||+.|+|||.+.+ ..++.++|||||||++|||++|..||.....
T Consensus 161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~ 240 (336)
T 3g2f_A 161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES 240 (336)
T ss_dssp ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence 99999998765322 112224469999999999976 3566789999999999999999888753332
Q ss_pred cCCCcchHH---------HHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 499 ANDDDVMLL---------DWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 499 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
......... ..+............+.. ...........+.+++.+||+.||++|||+.|+++.|+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ 315 (336)
T 3g2f_A 241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPE--AWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAE 315 (336)
T ss_dssp CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCT--TCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCc--ccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHH
Confidence 211111111 111111111111110100 111223466789999999999999999999999999986
No 154
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=6.2e-41 Score=343.93 Aligned_cols=260 Identities=27% Similarity=0.407 Sum_probs=205.1
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC------CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCc
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 359 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 359 (613)
..++|.+.+.||+|+||.||+|++. +++.||||.+...........+.+|+.+++.++||||+++++++.++..
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 4578999999999999999999842 5778999999765555556678999999999999999999999999999
Q ss_pred eEEEEecccCCcchhhhhccCCC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC---CCcEEE
Q 007200 360 RLLVYPFMVNGSVASCLRERGQS---QPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE---EFEAVV 433 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl 433 (613)
.++||||+++++|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999999999865421 23489999999999999999999999 9999999999999994 456999
Q ss_pred eccccceecCCCCC-ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHH
Q 007200 434 GDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVK 511 (613)
Q Consensus 434 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 511 (613)
+|||+++....... .......|++.|+|||.+.+..++.++||||||+++|||+| |+.||.... . .....
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~-----~---~~~~~ 256 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS-----N---QEVLE 256 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----H---HHHHH
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC-----H---HHHHH
Confidence 99999975533221 12233457889999999999999999999999999999998 999995221 1 11111
Q ss_pred HHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 512 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
........ . ........+.+++..||+.||++|||+.++++.|+.
T Consensus 257 ~~~~~~~~------~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~ 301 (327)
T 2yfx_A 257 FVTSGGRM------D----PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 301 (327)
T ss_dssp HHHTTCCC------C----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHhcCCCC------C----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence 11111110 0 111223578899999999999999999999999874
No 155
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=8.3e-40 Score=330.34 Aligned_cols=260 Identities=18% Similarity=0.231 Sum_probs=200.1
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEE-EcCCceEEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC-MTPTERLLV 363 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv 363 (613)
..++|.+.+.||+|+||+||+|.+. +++.||||++...... ..+..|+.++..+.|++++..++++ ......++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C---CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc---hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 3578999999999999999999974 7889999987554322 2477899999999988877766665 567778999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEeccccce
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAK 440 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfGla~ 440 (613)
|||+ +++|.+++..... ++++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++
T Consensus 84 ~e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~ 156 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK 156 (296)
T ss_dssp EECC-CCBHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCE
T ss_pred EEcc-CCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccce
Confidence 9999 9999999975432 389999999999999999999999 99999999999999 788999999999998
Q ss_pred ecCCCCCc------eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHh
Q 007200 441 LMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 514 (613)
Q Consensus 441 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 514 (613)
........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ......+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~ 234 (296)
T 4hgt_A 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK--RQKYERISEKK 234 (296)
T ss_dssp ECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS--SSHHHHHHHHH
T ss_pred eccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhh--hhhhhhhhccc
Confidence 76543321 22345689999999999999999999999999999999999999964332111 11111111111
Q ss_pred hcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 515 KEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
....... .. ...+..+.+++..||+.||++|||+.++++.|++
T Consensus 235 ~~~~~~~-~~--------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (296)
T 4hgt_A 235 MSTPIEV-LC--------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp HHSCHHH-HT--------TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred ccchhhh-hh--------ccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Confidence 0110000 00 0113578999999999999999999999999975
No 156
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.9e-40 Score=347.85 Aligned_cols=252 Identities=22% Similarity=0.264 Sum_probs=190.8
Q ss_pred hCCCCC-CccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHh-hcccCccceeeEEEEc----CCce
Q 007200 288 DNFSNR-NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMIS-MAVHRNLLRLRGFCMT----PTER 360 (613)
Q Consensus 288 ~~~~~~-~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~----~~~~ 360 (613)
++|... +.||+|+||+||+|.+. +|+.||||++... ..+.+|++++. ..+||||+++++++.. ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 456555 68999999999999976 6899999998632 34667888774 5589999999999875 5668
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC---CCcEEEeccc
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFG 437 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~DfG 437 (613)
++||||+.+|+|.+++..... ..+++..+..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 999999999999999986432 3499999999999999999999999 9999999999999998 7899999999
Q ss_pred cceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc
Q 007200 438 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 517 (613)
Q Consensus 438 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
+++...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........... ....+. ..
T Consensus 210 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~-~~~~i~----~~ 282 (400)
T 1nxk_A 210 FAKETTSHN--SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG-MKTRIR----MG 282 (400)
T ss_dssp TCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCS-HHHHHH----HT
T ss_pred cccccCCCC--ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHH-HHHHHH----cC
Confidence 998654322 22345689999999999999999999999999999999999999964321111111 111111 11
Q ss_pred cccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 518 KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
... ............+.+++..||+.||++|||+.|+++.
T Consensus 283 ~~~------~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 283 QYE------FPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CCC------CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccc------CCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 100 0000111234578999999999999999999999974
No 157
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.4e-41 Score=342.80 Aligned_cols=265 Identities=26% Similarity=0.444 Sum_probs=199.1
Q ss_pred HHHHHHhhCCCCCCccccCcCcEEEEEEeC----CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEE
Q 007200 281 RELQVATDNFSNRNILGRGGFGKVYKGRLT----DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCM 355 (613)
Q Consensus 281 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 355 (613)
.++.+..++|.+.+.||+|+||.||+|.+. ++..||+|.++.... ......+.+|+.+++.++||||+++++++.
T Consensus 27 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 27 EDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp TTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEe
Confidence 344456678999999999999999999864 244899999875533 333456899999999999999999999998
Q ss_pred cCCc-----eEEEEecccCCcchhhhhccC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC
Q 007200 356 TPTE-----RLLVYPFMVNGSVASCLRERG--QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE 428 (613)
Q Consensus 356 ~~~~-----~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~ 428 (613)
+... .++||||+++|+|.+++.... .....+++..++.++.|+++||+|||++ +|+||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~ 183 (313)
T 3brb_A 107 EMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDD 183 (313)
T ss_dssp C-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTT
T ss_pred eccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCC
Confidence 7543 499999999999999985432 2234599999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCC-ceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchH
Q 007200 429 FEAVVGDFGLAKLMDYKDT-HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVML 506 (613)
Q Consensus 429 ~~~kl~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~ 506 (613)
+.+||+|||+++....... .......+++.|+|||.+.+..++.++||||||+++|||++ |..||.... ....
T Consensus 184 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~ 258 (313)
T 3brb_A 184 MTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ-----NHEM 258 (313)
T ss_dssp SCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----GGGH
T ss_pred CcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC-----HHHH
Confidence 9999999999986643321 11223447889999999999999999999999999999999 899985322 1111
Q ss_pred HHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 507 LDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
... ...... ...+......+.+++.+||+.||++|||+.++++.|+.
T Consensus 259 ~~~---~~~~~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 259 YDY---LLHGHR----------LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp HHH---HHTTCC----------CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHH---HHcCCC----------CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111 111111 01112233578999999999999999999999999975
No 158
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.7e-40 Score=334.39 Aligned_cols=251 Identities=24% Similarity=0.332 Sum_probs=200.9
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CC-------CEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCC
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DG-------SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 358 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 358 (613)
.++|.+.+.||+|+||+||+|.+. ++ ..||+|++.... ......+.+|+.+++.++||||+++++++.+++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 467888999999999999999865 33 479999986543 234567899999999999999999999999999
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc--------
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE-------- 430 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~-------- 430 (613)
..++||||+.+|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNKN---CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCEEEEECCCCCCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 99999999999999999976432 389999999999999999999999 9999999999999998887
Q ss_pred EEEeccccceecCCCCCceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHH
Q 007200 431 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 509 (613)
Q Consensus 431 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~ 509 (613)
+||+|||++..... .....|++.|+|||.+.+ ..++.++||||||+++|||++|..|+.... . ....
T Consensus 160 ~kl~Dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~----~---~~~~ 227 (289)
T 4fvq_A 160 IKLSDPGISITVLP-----KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL----D---SQRK 227 (289)
T ss_dssp EEECCCCSCTTTSC-----HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS----C---HHHH
T ss_pred eeeccCcccccccC-----ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc----c---hHHH
Confidence 99999999865432 123448899999999987 678999999999999999999655442111 1 1111
Q ss_pred HHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 007200 510 VKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 568 (613)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 568 (613)
........... . .....+.+++..||+.||++|||+.++++.|+.+-
T Consensus 228 ~~~~~~~~~~~----~--------~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 228 LQFYEDRHQLP----A--------PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp HHHHHTTCCCC----C--------CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred HHHhhccCCCC----C--------CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 11111111110 0 01235889999999999999999999999998763
No 159
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=8.6e-41 Score=335.98 Aligned_cols=247 Identities=21% Similarity=0.320 Sum_probs=199.9
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|++.+.||+|+||+||+|.+. +++.||+|+++.... ......+.+|+..+..+ +||||+++++++.+++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 467899999999999999999987 799999999976533 23355788899999988 899999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---------------
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE--------------- 428 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~--------------- 428 (613)
|||+++++|.+++.........+++..+..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999976533234589999999999999999999999 99999999999999844
Q ss_pred ----CcEEEeccccceecCCCCCceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCc
Q 007200 429 ----FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD 503 (613)
Q Consensus 429 ----~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~ 503 (613)
..+||+|||.+....... ...||+.|+|||.+.+. .++.++|||||||++|||++|.+++....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------ 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence 479999999998765432 23489999999999776 56789999999999999999998764211
Q ss_pred chHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 504 VMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... .. ..... +... ......+.+++.+||+.||++|||+.|+++
T Consensus 236 --~~~---~~-~~~~~-----~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 --QWH---EI-RQGRL-----PRIP----QVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp --HHH---HH-HTTCC-----CCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHH---HH-HcCCC-----CCCC----cccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 111 11 11111 1111 122357899999999999999999999987
No 160
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.6e-40 Score=339.00 Aligned_cols=261 Identities=22% Similarity=0.256 Sum_probs=196.4
Q ss_pred hCCCCC-CccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceEEEE
Q 007200 288 DNFSNR-NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 288 ~~~~~~-~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 364 (613)
+.|.+. +.||+|+||+||+|... +++.||||++.... ......+.+|++++.++ +||||+++++++.+++..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 567774 78999999999999965 78999999997553 23456788999999884 7999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc---EEEecccccee
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDFGLAKL 441 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~DfGla~~ 441 (613)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||++..
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 9999999999997653 389999999999999999999999 9999999999999998776 99999999976
Q ss_pred cCCCCC------ceeecccccccccccccccc-----CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCc---c---
Q 007200 442 MDYKDT------HVTTAVRGTIGHIAPEYLST-----GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDD---V--- 504 (613)
Q Consensus 442 ~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~---~--- 504 (613)
...... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.......... .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 243 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCH
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccch
Confidence 542211 11223458999999999875 457899999999999999999999996432111000 0
Q ss_pred hHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 505 MLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.....+.......... .... ........+.+++.+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~i~~~~~~-~~~~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 244 ACQNMLFESIQEGKYE-FPDK-----DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHHHHHCCCC-CCHH-----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hHHHHHHHHHhccCcc-cCch-----hcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 0001111111111100 0000 00112357899999999999999999999988
No 161
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.3e-40 Score=359.40 Aligned_cols=255 Identities=27% Similarity=0.366 Sum_probs=206.8
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
..++|...+.||+|+||.||+|... +|+.||+|++.... .......+.+|+.++..++||||+++++++.+....++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3467888999999999999999986 79999999997542 12235568899999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+++|+|.+++...+. ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++..
T Consensus 262 VmEy~~gg~L~~~l~~~~~--~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EECCCCSCBHHHHHHSSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEcCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence 9999999999999976542 3489999999999999999999999 9999999999999999999999999999876
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ... ..+.........
T Consensus 337 ~~~~--~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~----~~~-~~i~~~i~~~~~--- 406 (576)
T 2acx_A 337 PEGQ--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK----IKR-EEVERLVKEVPE--- 406 (576)
T ss_dssp CTTC--CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC----CCH-HHHHHHHHHCCC---
T ss_pred ccCc--cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc----hhH-HHHHHHhhcccc---
Confidence 5332 233457999999999999989999999999999999999999999633211 011 111111111110
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVR 562 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~ 562 (613)
.++......+.+++..||+.||++|| ++.|+++
T Consensus 407 -------~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 407 -------EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp -------CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred -------cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11122235789999999999999999 6777775
No 162
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-40 Score=344.19 Aligned_cols=256 Identities=26% Similarity=0.336 Sum_probs=204.4
Q ss_pred hhCCCCCCccccCcCcEEEEEEe----CCCCEEEEEEeccccC---cccHHHHHHHHHHHhhc-ccCccceeeEEEEcCC
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRL----TDGSLVAVKRLKEERT---QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPT 358 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 358 (613)
.++|.+.+.||+|+||+||+|+. .+|+.||||+++.... ......+.+|+.++..+ .||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36789999999999999999997 3689999999875431 12234567899999999 5999999999999999
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccc
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 438 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 438 (613)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred eEEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 9999999999999999998654 389999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCceeeccccccccccccccccC--CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhc
Q 007200 439 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTG--KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 516 (613)
Q Consensus 439 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 516 (613)
++..............||+.|+|||.+.+. .++.++|||||||++|||++|+.||..... ..............
T Consensus 206 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~----~~~~~~~~~~~~~~ 281 (355)
T 1vzo_A 206 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE----KNSQAEISRRILKS 281 (355)
T ss_dssp EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTS----CCCHHHHHHHHHHC
T ss_pred CeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCc----cchHHHHHHHHhcc
Confidence 987654333334456799999999999863 478999999999999999999999963321 11122222222211
Q ss_pred ccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHHh
Q 007200 517 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERP-----KMSEVVRML 564 (613)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~L 564 (613)
. +. .+......+.+++.+||..||++|| |+.|+++..
T Consensus 282 ~-------~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 282 E-------PP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp C-------CC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred C-------CC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 1 11 1122335688999999999999999 899998754
No 163
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.7e-40 Score=338.84 Aligned_cols=269 Identities=23% Similarity=0.312 Sum_probs=210.4
Q ss_pred cCHHHHHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhh--cccCccceeeEEEE
Q 007200 278 FSLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISM--AVHRNLLRLRGFCM 355 (613)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~ 355 (613)
.++.......++|.+.+.||+|+||+||+|++. |+.||||++... ....+.+|.+++.. ++||||+++++++.
T Consensus 32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~ 106 (342)
T 1b6c_B 32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADN 106 (342)
T ss_dssp SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEE
T ss_pred CceeecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeec
Confidence 344445667789999999999999999999984 899999998643 34567788888877 78999999999998
Q ss_pred cCC----ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCce
Q 007200 356 TPT----ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH--------DHCDPKIIHRDVKAANI 423 (613)
Q Consensus 356 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--------~~~~~~ivH~Dlk~~NI 423 (613)
.+. ..++||||+.+|+|.+++... ++++..+..++.|++.||+||| +. +|+||||||+||
T Consensus 107 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NI 178 (342)
T 1b6c_B 107 KDNGTWTQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNI 178 (342)
T ss_dssp CCCSSCCCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGE
T ss_pred ccCCccceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHE
Confidence 876 789999999999999999764 3899999999999999999999 77 999999999999
Q ss_pred eecCCCcEEEeccccceecCCCCCc---eeeccccccccccccccccCC------CCCcccchhHHHHHHHHHhC-----
Q 007200 424 LLDEEFEAVVGDFGLAKLMDYKDTH---VTTAVRGTIGHIAPEYLSTGK------SSEKTDVFGYGVMLLELITG----- 489 (613)
Q Consensus 424 ll~~~~~~kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~------~~~~~DVwS~G~il~elltg----- 489 (613)
+++.++.+||+|||+++........ ......||+.|+|||.+.+.. ++.++|||||||++|||+||
T Consensus 179 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~ 258 (342)
T 1b6c_B 179 LVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG 258 (342)
T ss_dssp EECTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTT
T ss_pred EECCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCC
Confidence 9999999999999999876544322 123446899999999997763 34689999999999999999
Q ss_pred -----CCCcccccccCCCcchHHHHHHHHhhcccccccccCccCCC-CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 490 -----QRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGN-YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 490 -----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
+.||...... ......+..... ... ..+..... ...+....+.+++.+||+.||++|||+.+|++.
T Consensus 259 ~~~~~~~p~~~~~~~---~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 259 IHEDYQLPYYDLVPS---DPSVEEMRKVVC-EQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp BCCCCCCTTTTTSCS---SCCHHHHHHHHT-TSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred cccccccCccccCcC---cccHHHHHHHHH-HHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 6677532211 111222222211 111 11111111 123567789999999999999999999999999
Q ss_pred hhcC
Q 007200 564 LEGD 567 (613)
Q Consensus 564 L~~~ 567 (613)
|+.+
T Consensus 331 L~~i 334 (342)
T 1b6c_B 331 LSQL 334 (342)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9863
No 164
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.9e-40 Score=343.68 Aligned_cols=200 Identities=25% Similarity=0.387 Sum_probs=176.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|.+.+.||+|+||+||+|.+. +++.||+|++...........+.+|+.+++.++||||+++++++.++...++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 467889999999999999999987 7899999999876555556678999999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+++++|.+++.... .+++..+..++.|++.||+|||+.. +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 999999999998754 3899999999999999999999832 7999999999999999999999999998754321
Q ss_pred CCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCccc
Q 007200 446 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 495 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~ 495 (613)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 186 ---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 186 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp ---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred ---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 22334689999999999999999999999999999999999999963
No 165
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.1e-39 Score=329.45 Aligned_cols=259 Identities=18% Similarity=0.232 Sum_probs=203.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEE-EcCCceEEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC-MTPTERLLVY 364 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~ 364 (613)
.++|.+.+.||+|+||.||+|++. +|+.||||++...... ..+.+|+.++..+.|++++..++++ ......++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH---PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC---CHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch---hHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 467999999999999999999974 7899999998654332 3578999999999998877666655 5567789999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEecccccee
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKL 441 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfGla~~ 441 (613)
||+ +++|.+++..... ++++..+..++.|++.||+|||++ +|+||||||+||++ +.++.+||+|||+++.
T Consensus 85 e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 157 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK 157 (296)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCccc
Confidence 999 9999999975432 499999999999999999999999 99999999999999 4888999999999987
Q ss_pred cCCCCCc------eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh
Q 007200 442 MDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 515 (613)
Q Consensus 442 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 515 (613)
....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ......+.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~ 235 (296)
T 3uzp_A 158 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATK--RQKYERISEKKM 235 (296)
T ss_dssp CBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSS--SSHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhh--hhhhhhhccccc
Confidence 6543321 12345699999999999999999999999999999999999999974322111 111111111111
Q ss_pred cccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 516 EKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
...... .. ...+..+.+++..||+.||++|||+.++++.|+.
T Consensus 236 ~~~~~~-~~--------~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~ 277 (296)
T 3uzp_A 236 STPIEV-LC--------KGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRN 277 (296)
T ss_dssp HSCHHH-HT--------TTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHH
T ss_pred CCchHH-HH--------hhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHH
Confidence 110000 00 1123578999999999999999999999999975
No 166
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.2e-40 Score=340.01 Aligned_cols=264 Identities=20% Similarity=0.281 Sum_probs=193.8
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc-cHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
...++|.+.+.||+|+||+||+|.+. +++.||||+++...... ....+.+|+.+++.++||||+++++++.++...++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 34568999999999999999999976 78899999997554332 23457799999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec-----CCCcEEEeccc
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD-----EEFEAVVGDFG 437 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~-----~~~~~kl~DfG 437 (613)
||||+. |+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ .++.+||+|||
T Consensus 111 v~e~~~-~~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 111 IFEYAE-NDLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EEECCS-EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EEecCC-CCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 999997 59999987654 389999999999999999999999 999999999999994 55569999999
Q ss_pred cceecCCCCCceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhc
Q 007200 438 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 516 (613)
Q Consensus 438 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 516 (613)
+++....... ......||+.|+|||.+.+. .++.++|||||||++|||++|+.||.... .......+......
T Consensus 183 ~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~~~~~ 256 (329)
T 3gbz_A 183 LARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS-----EIDQLFKIFEVLGL 256 (329)
T ss_dssp HHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCC
T ss_pred CccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC-----HHHHHHHHHHHhCC
Confidence 9986643322 22334589999999999875 48999999999999999999999995321 11111111111100
Q ss_pred c---cccccc--------cCccCCCCcH-----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 517 K---KLEQLV--------DSDMEGNYIE-----EEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 517 ~---~~~~~~--------~~~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. ...... .+........ .....+.+++.+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 257 PDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp CCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 000000 0000000001 12357889999999999999999999987
No 167
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=5.4e-40 Score=352.11 Aligned_cols=260 Identities=19% Similarity=0.221 Sum_probs=194.3
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc-CcccHHHHHHHHHHHhhcccCccceeeEEEEcC------C
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------T 358 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 358 (613)
.++|.+.+.||+|+||+||+|.+. +|+.||||++.... .......+.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467999999999999999999976 68899999997543 233355788999999999999999999999654 3
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccc
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 438 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 438 (613)
..++||||+.++ +.+.+.. .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 141 ~~~lv~E~~~~~-l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~ 210 (464)
T 3ttj_A 141 DVYLVMELMDAN-LCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 210 (464)
T ss_dssp EEEEEEECCSEE-HHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCC
T ss_pred eEEEEEeCCCCC-HHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEe
Confidence 569999999765 5555532 288999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc-
Q 007200 439 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK- 517 (613)
Q Consensus 439 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 517 (613)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .......+.......
T Consensus 211 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~-----~~~~~~~i~~~lg~p~ 283 (464)
T 3ttj_A 211 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD-----YIDQWNKVIEQLGTPC 283 (464)
T ss_dssp C-----C--CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCSCC
T ss_pred eeecCCC--cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCCCC
Confidence 9865432 22344569999999999999999999999999999999999999996321 111111111110000
Q ss_pred --cc-------ccccc---------------Ccc-CC--CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 518 --KL-------EQLVD---------------SDM-EG--NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 518 --~~-------~~~~~---------------~~~-~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
.+ ..... ... .. .........+.+++.+||..||++|||++|+++.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp HHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 00000 000 00 0011225678999999999999999999999874
No 168
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=6.5e-41 Score=335.50 Aligned_cols=251 Identities=26% Similarity=0.396 Sum_probs=197.5
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcC-CceEEEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-TERLLVY 364 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ 364 (613)
..++|++.+.||+|+||+||+|... |+.||||+++... ....+.+|+.+++.++||||+++++++.+. ...++||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 3567889999999999999999885 8899999987543 345788999999999999999999997654 4789999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+++++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.....
T Consensus 95 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp CCCTTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred ecCCCCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 99999999999976432 1278899999999999999999999 999999999999999999999999999975443
Q ss_pred CCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
. .....+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... ..... ......
T Consensus 170 ~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~~~~~---~~~~~~------ 231 (278)
T 1byg_A 170 T----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVP---RVEKGY------ 231 (278)
T ss_dssp ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----GGHHH---HHTTTC------
T ss_pred c----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH---HHhcCC------
Confidence 2 122347889999999999999999999999999999998 9999963221 11111 111110
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
...........+.+++.+||+.||++|||+.++++.|+.+
T Consensus 232 ----~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i 271 (278)
T 1byg_A 232 ----KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271 (278)
T ss_dssp ----CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ----CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence 0111122346789999999999999999999999999753
No 169
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=7.5e-40 Score=341.15 Aligned_cols=252 Identities=17% Similarity=0.195 Sum_probs=202.6
Q ss_pred HHhhCCCCCCccccCcCcEEEEEE------eCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcc---cCccceeeEEEE
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGR------LTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV---HRNLLRLRGFCM 355 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~ 355 (613)
...++|.+.+.||+|+||+||+|. ..+++.||||+++.. ....+..|+.++..+. |+||+++++++.
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 445779999999999999999994 346889999999654 3446777888777776 999999999999
Q ss_pred cCCceEEEEecccCCcchhhhhccCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-------
Q 007200 356 TPTERLLVYPFMVNGSVASCLRERGQ-SQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE------- 427 (613)
Q Consensus 356 ~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~------- 427 (613)
.++..++||||+++|+|.+++..... ....+++..+..++.||+.||+|||++ +|+||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 99999999999999999999975322 234599999999999999999999999 9999999999999998
Q ss_pred ----CCcEEEeccccceecCC-CCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCC
Q 007200 428 ----EFEAVVGDFGLAKLMDY-KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 502 (613)
Q Consensus 428 ----~~~~kl~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~ 502 (613)
++.+||+|||+++.+.. ..........||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--- 291 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG--- 291 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT---
T ss_pred cccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC---
Confidence 89999999999986542 2233445567999999999999999999999999999999999999999633210
Q ss_pred cchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCC-CCHHHHHHHhhc
Q 007200 503 DVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMER-PKMSEVVRMLEG 566 (613)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Pt~~evl~~L~~ 566 (613)
.......+ ... ...+.+.+++..|++.+|.+| |++.++.+.|++
T Consensus 292 -------------~~~~~~~~----~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~ 336 (365)
T 3e7e_A 292 -------------ECKPEGLF----RRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 336 (365)
T ss_dssp -------------EEEECSCC----TTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHH
T ss_pred -------------ceeechhc----ccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHH
Confidence 00011111 111 113467788889999999998 578888887764
No 170
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.1e-39 Score=329.32 Aligned_cols=249 Identities=23% Similarity=0.372 Sum_probs=205.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|...+.||+|+||.||+|.+. +++.||+|++..... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357888999999999999999987 588999999875532 23345788999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+.+++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 94 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~ 166 (294)
T 2rku_A 94 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166 (294)
T ss_dssp EECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecc
Confidence 99999999999987653 389999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+......... .
T Consensus 167 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~~-~---- 232 (294)
T 2rku_A 167 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIKKNE-Y---- 232 (294)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHTTC-C----
T ss_pred cCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHhhcc-C----
Confidence 3322 2334568999999999999889999999999999999999999996322 111111111111 0
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. +......+.+++.+||+.||++|||+.|+++
T Consensus 233 --~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 233 --SI----PKHINPVAASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp --CC----CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred --CC----ccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 01 1122356889999999999999999999987
No 171
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=9.3e-40 Score=335.13 Aligned_cols=260 Identities=20% Similarity=0.254 Sum_probs=204.4
Q ss_pred HHHHHHhhCCCCC-CccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcc-cCccceeeEEEEc
Q 007200 281 RELQVATDNFSNR-NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAV-HRNLLRLRGFCMT 356 (613)
Q Consensus 281 ~~~~~~~~~~~~~-~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 356 (613)
...+...++|.+. +.||+|+||+||+|... +|+.||+|++..... ......+.+|+.++..+. ||||+++++++.+
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3345556777777 88999999999999977 689999999976543 334667899999999885 6999999999999
Q ss_pred CCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC---CCcEEE
Q 007200 357 PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE---EFEAVV 433 (613)
Q Consensus 357 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl 433 (613)
....++||||+.+|+|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||
T Consensus 101 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL 175 (327)
T 3lm5_A 101 TSEIILILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKI 175 (327)
T ss_dssp SSEEEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEE
T ss_pred CCeEEEEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEE
Confidence 999999999999999999986532 23489999999999999999999999 9999999999999998 789999
Q ss_pred eccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHH
Q 007200 434 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 513 (613)
Q Consensus 434 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 513 (613)
+|||+++...... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||.... . .+.....
T Consensus 176 ~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~---~~~~~~i 245 (327)
T 3lm5_A 176 VDFGMSRKIGHAC--ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGED-----N---QETYLNI 245 (327)
T ss_dssp CCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----H---HHHHHHH
T ss_pred eeCccccccCCcc--ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----c---hHHHHHH
Confidence 9999998765322 2233569999999999999999999999999999999999999995322 1 1111111
Q ss_pred hhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 514 LKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.... ..............+.+++.+||+.||++|||++++++
T Consensus 246 ~~~~-------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 246 SQVN-------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HHTC-------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred Hhcc-------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 1100 00011111223456889999999999999999999986
No 172
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2e-40 Score=340.81 Aligned_cols=262 Identities=24% Similarity=0.358 Sum_probs=199.0
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc-cHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
++|+..+.||+|+||.||+|.+. +|+.||||++....... ....+.+|+.+++.++||||+++++++.+....++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 57888999999999999999987 58999999986554332 24457899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+.+++|.++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 177 (331)
T 4aaa_A 105 FVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 177 (331)
T ss_dssp CCSEEHHHHHHHSTT----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred cCCcchHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCC
Confidence 999999988765433 389999999999999999999999 9999999999999999999999999999865432
Q ss_pred CCceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHH-----------
Q 007200 446 DTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL----------- 513 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~----------- 513 (613)
.. ......|++.|+|||.+.+. .++.++|||||||++|||++|+.||.... .......+...
T Consensus 178 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 178 GE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDS-----DIDQLYHIMMCLGNLIPRHQEL 251 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCSCCHHHHHH
T ss_pred cc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCC-----cHHHHHHHHHHhCCCChhhhhH
Confidence 22 23344589999999999875 68999999999999999999999996322 11111111100
Q ss_pred -hhcccccccccCccCCCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 514 -LKEKKLEQLVDSDMEGNYI-----EEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 514 -~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
...........+....... ......+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0001111111111111111 123467899999999999999999999987
No 173
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.5e-40 Score=342.49 Aligned_cols=270 Identities=19% Similarity=0.261 Sum_probs=199.9
Q ss_pred CHHHHHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcc----------cHHHHHHHHHHHhhcccCccc
Q 007200 279 SLRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG----------GELQFQTEVEMISMAVHRNLL 348 (613)
Q Consensus 279 ~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~e~~~l~~l~h~niv 348 (613)
...++....++|.+.+.||+|+||.||+|.+.+|+.||||++....... ....+.+|+.+++.++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4567888889999999999999999999998889999999996543221 125789999999999999999
Q ss_pred eeeEEEEc-----CCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 007200 349 RLRGFCMT-----PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANI 423 (613)
Q Consensus 349 ~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NI 423 (613)
++++++.. ....++||||+. |+|.+++.... ..+++..+..++.||+.||+|||++ +|+||||||+||
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NI 165 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNI 165 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGE
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHE
Confidence 99999854 235799999997 68888887543 2489999999999999999999999 999999999999
Q ss_pred eecCCCcEEEeccccceecCCCCCceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCC
Q 007200 424 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 502 (613)
Q Consensus 424 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~ 502 (613)
+++.++.+||+|||+++...... ......||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||....
T Consensus 166 l~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~----- 238 (362)
T 3pg1_A 166 LLADNNDITICDFNLAREDTADA--NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGST----- 238 (362)
T ss_dssp EECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----
T ss_pred EEcCCCCEEEEecCccccccccc--ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCC-----
Confidence 99999999999999997543222 2234558999999999877 678999999999999999999999996322
Q ss_pred cchHHHHHHHHhhccccc-----------ccccCc---cCCCC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 503 DVMLLDWVKGLLKEKKLE-----------QLVDSD---MEGNY----IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 503 ~~~~~~~~~~~~~~~~~~-----------~~~~~~---~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.......+.......... ...... ..... .......+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 239 FYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp HHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 111111111111110000 000000 00000 1112356889999999999999999999987
No 174
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=7.5e-40 Score=328.60 Aligned_cols=247 Identities=23% Similarity=0.393 Sum_probs=203.2
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEc--------
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT-------- 356 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 356 (613)
..++|+..+.||+|+||.||+|.+. +|+.||+|.+.... ..+.+|++++..++||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 4467899999999999999999987 79999999997543 246789999999999999999998854
Q ss_pred --------CCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC
Q 007200 357 --------PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE 428 (613)
Q Consensus 357 --------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~ 428 (613)
....++||||+++++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDT 158 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGG--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEET
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCC
Confidence 3457999999999999999976432 2489999999999999999999999 99999999999999999
Q ss_pred CcEEEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHH
Q 007200 429 FEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 508 (613)
Q Consensus 429 ~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~ 508 (613)
+.+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|||++|..|+.... .
T Consensus 159 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~----------~ 226 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS----------K 226 (284)
T ss_dssp TEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH----------H
T ss_pred CCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH----------H
Confidence 9999999999987654321 233458999999999999999999999999999999999999884211 1
Q ss_pred HHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 509 WVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
.... ..... ... .....+.+++.+||+.||++|||+.|+++.|+..
T Consensus 227 ~~~~-~~~~~--------~~~----~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 227 FFTD-LRDGI--------ISD----IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp HHHH-HHTTC--------CCT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHH-hhccc--------ccc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 1111 11111 111 1224688999999999999999999999999754
No 175
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.3e-40 Score=339.72 Aligned_cols=265 Identities=25% Similarity=0.296 Sum_probs=196.6
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCccc----HHHHHHHHHHHhhcccCccceeeEEEEcCCce
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGG----ELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~----~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 360 (613)
..++|.+.+.||+|+||.||+|.+. +|+.||||++........ ...+.+|+.+++.++||||+++++++.+....
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 3468999999999999999999976 689999999975432211 23578999999999999999999999999999
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
++||||+.+ +|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred EEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccce
Confidence 999999986 8888886543 2488899999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccc-
Q 007200 441 LMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK- 518 (613)
Q Consensus 441 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 518 (613)
....... ......||+.|+|||.+.+. .++.++|||||||++|||++|.+||.... .......+........
T Consensus 161 ~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~-----~~~~~~~i~~~~~~~~~ 234 (346)
T 1ua2_A 161 SFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS-----DLDQLTRIFETLGTPTE 234 (346)
T ss_dssp TTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCCCCT
T ss_pred eccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHHHcCCCCh
Confidence 7643322 23345689999999999764 48899999999999999999999985321 1111111111111100
Q ss_pred --cccc---ccC---ccCCCCc-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 519 --LEQL---VDS---DMEGNYI-----EEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 519 --~~~~---~~~---~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
.... .+. ......+ ......+.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 235 EQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 000 0000001 1223678999999999999999999999883
No 176
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.3e-39 Score=326.78 Aligned_cols=252 Identities=22% Similarity=0.324 Sum_probs=202.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-----ccHHHHHHHHHHHhhcccCccceeeEEEEcCCce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-----GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 360 (613)
.++|.+.+.||+|+||.||+|... +|+.||+|.++..... .....+.+|+.+++.++||||+++++++.++...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 467889999999999999999987 6899999998754322 2356789999999999999999999999999999
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC----cEEEecc
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF----EAVVGDF 436 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~----~~kl~Df 436 (613)
++||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++ .+||+||
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~df 156 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKE----SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDF 156 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEeecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEec
Confidence 99999999999999997643 389999999999999999999999 999999999999999877 8999999
Q ss_pred ccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhc
Q 007200 437 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 516 (613)
Q Consensus 437 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 516 (613)
|++....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ..+........
T Consensus 157 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~ 226 (283)
T 3bhy_A 157 GIAHKIEAGN--EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET--------KQETLTNISAV 226 (283)
T ss_dssp TTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHTT
T ss_pred ccceeccCCC--cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc--------hHHHHHHhHhc
Confidence 9998764322 2233458999999999999999999999999999999999999996321 11111111110
Q ss_pred ccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 517 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. .. .... ........+.+++.+||+.||++|||+.|+++
T Consensus 227 ~-~~--~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 227 N-YD--FDEE----YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp C-CC--CCHH----HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred c-cC--Ccch----hcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 0 00 0000 00112356889999999999999999999997
No 177
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.9e-40 Score=336.22 Aligned_cols=265 Identities=26% Similarity=0.390 Sum_probs=186.6
Q ss_pred HHHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceE
Q 007200 283 LQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERL 361 (613)
Q Consensus 283 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 361 (613)
+.+..++|.+.+.||+|+||.||+|.+. +++.||||++...........+.+|+.++..++||||+++++++...+..+
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELW 89 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEE
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcE
Confidence 3455678999999999999999999965 689999999876554445567889999999999999999999999999999
Q ss_pred EEEecccCCcchhhhhcc----CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccc
Q 007200 362 LVYPFMVNGSVASCLRER----GQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 437 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~----~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 437 (613)
+||||+++++|.+++... ......+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 90 LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence 999999999999998642 11223589999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCC----ceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHH
Q 007200 438 LAKLMDYKDT----HVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 512 (613)
Q Consensus 438 la~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~ 512 (613)
++........ .......||+.|+|||.+.+ ..++.++||||||+++|||++|+.||..... ..... .
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~---~ 238 (303)
T 2vwi_A 167 VSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPP-----MKVLM---L 238 (303)
T ss_dssp HHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCG-----GGHHH---H
T ss_pred chheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCch-----hhHHH---H
Confidence 9876543211 12234468999999999876 5689999999999999999999999963221 11111 1
Q ss_pred Hhhccc--c-cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 513 LLKEKK--L-EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 513 ~~~~~~--~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
...... . ....+.... ......+.+++.+||+.||++|||+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 239 TLQNDPPSLETGVQDKEML----KKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp HHTSSCCCTTC-----CCC----CCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HhccCCCccccccccchhh----hhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111110 0 001111111 122356889999999999999999999987
No 178
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=338.10 Aligned_cols=264 Identities=25% Similarity=0.406 Sum_probs=207.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEe-----CCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCC--c
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRL-----TDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT--E 359 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~ 359 (613)
.++|.+.+.||+|+||.||+|++ .+|+.||||++.... ......+.+|+++++.++||||+++++++.... .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 118 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 118 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----C
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCc
Confidence 46788899999999999999984 368899999997643 334567899999999999999999999987643 6
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||||+++++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 119 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~ 192 (326)
T 2w1i_A 119 LKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLT 192 (326)
T ss_dssp CEEEECCCTTCBHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred eEEEEECCCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcch
Confidence 8999999999999999986532 489999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCce--eeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccc------cCC-CcchHHHHH
Q 007200 440 KLMDYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARL------AND-DDVMLLDWV 510 (613)
Q Consensus 440 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~------~~~-~~~~~~~~~ 510 (613)
+......... .....++..|+|||.+.+..++.++||||||+++|||+||..||..... ... ........+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (326)
T 2w1i_A 193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHL 272 (326)
T ss_dssp EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHH
T ss_pred hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHH
Confidence 8775443221 2223467789999999988899999999999999999999999863210 000 001111111
Q ss_pred HHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 511 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
........ ....+......+.+++.+||+.||++|||+.|+++.|+.
T Consensus 273 ~~~~~~~~---------~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~ 319 (326)
T 2w1i_A 273 IELLKNNG---------RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQ 319 (326)
T ss_dssp HHHHHTTC---------CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred HHHhhcCC---------CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 11111111 111122334678999999999999999999999999985
No 179
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.6e-40 Score=340.93 Aligned_cols=257 Identities=22% Similarity=0.304 Sum_probs=194.4
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEcCC------
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPT------ 358 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 358 (613)
.++|...+.||+|+||.||+|.+. +|+.||||++...... .....+.+|+.+++.++||||+++++++..+.
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 367888999999999999999975 7999999999654332 23456889999999999999999999997653
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccc
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 438 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 438 (613)
..++||||+ +++|.++++.. .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~ 174 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGL 174 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred eEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeec
Confidence 459999999 88999998763 389999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc
Q 007200 439 AKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 517 (613)
Q Consensus 439 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
++..... .....||+.|+|||.+.+ ..++.++||||+||++|||++|+.||.... .......+.......
T Consensus 175 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~l~~i~~~~g~~ 245 (367)
T 1cm8_A 175 ARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSD-----HLDQLKEIMKVTGTP 245 (367)
T ss_dssp CEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCCC
T ss_pred ccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHhcCCC
Confidence 9875432 234568999999999887 679999999999999999999999996322 111111111110000
Q ss_pred c------------------ccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 518 K------------------LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 518 ~------------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. +........ ..........+.+++.+||..||++|||+.|+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 246 PAEFVQRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp CHHHHHTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CHHHHHHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 0 000000000 0011122457889999999999999999999988
No 180
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=4.5e-40 Score=348.74 Aligned_cols=254 Identities=23% Similarity=0.337 Sum_probs=192.5
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-------ccHHHHHHHHHHHhhcccCccceeeEEEEc
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-------GGELQFQTEVEMISMAVHRNLLRLRGFCMT 356 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 356 (613)
...++|.+.+.||+|+||+||+|.+. +++.||||++...... .....+.+|+.++++++||||+++++++..
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~ 211 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 211 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 34678999999999999999999976 6899999998754211 112247899999999999999999999754
Q ss_pred CCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC---cEEE
Q 007200 357 PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF---EAVV 433 (613)
Q Consensus 357 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~~kl 433 (613)
...++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||
T Consensus 212 -~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 212 -EDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp -SEEEEEEECCTTCBGGGGTSSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred -CceEEEEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEE
Confidence 55799999999999999887543 489999999999999999999999 999999999999997544 5999
Q ss_pred eccccceecCCCCCceeecccccccccccccccc---CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007200 434 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST---GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 510 (613)
Q Consensus 434 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 510 (613)
+|||+++..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ........+
T Consensus 284 ~DFG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~i 357 (419)
T 3i6u_A 284 TDFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR----TQVSLKDQI 357 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS----SSCCHHHHH
T ss_pred eecccceecCCC--ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc----chHHHHHHH
Confidence 999999876432 22334569999999999864 567889999999999999999999996322 111122211
Q ss_pred HHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 511 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. ....... +. ........+.+++.+||+.||++|||+.|+++
T Consensus 358 ~----~~~~~~~--~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 358 T----SGKYNFI--PE----VWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp H----TTCCCCC--HH----HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred h----cCCCCCC--ch----hhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 1 1110000 00 00112357899999999999999999999987
No 181
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.4e-39 Score=326.87 Aligned_cols=247 Identities=24% Similarity=0.361 Sum_probs=204.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+|+++++.++||||+++++++.+....++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 367888999999999999999976 578899999865421 22345788999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++....
T Consensus 93 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp ECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 99999999999997654 389999999999999999999999 99999999999999999999999999997654
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ............
T Consensus 166 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~------ 228 (284)
T 2vgo_A 166 SLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS--------HTETHRRIVNVD------ 228 (284)
T ss_dssp SSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHTTC------
T ss_pred ccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC--------HhHHHHHHhccc------
Confidence 322 234568999999999999999999999999999999999999996322 111111111110
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... +......+.+++.+|++.||++|||+.++++
T Consensus 229 -~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 229 -LKF----PPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp -CCC----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -cCC----CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 011 1122357889999999999999999999987
No 182
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2e-40 Score=368.16 Aligned_cols=247 Identities=25% Similarity=0.370 Sum_probs=196.7
Q ss_pred CccccCcCcEEEEEEeC---CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEecccC
Q 007200 294 NILGRGGFGKVYKGRLT---DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPFMVN 369 (613)
Q Consensus 294 ~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 369 (613)
+.||+|+||+||+|.+. .++.||||+++.... ......+.+|+.++++++||||+++++++.. ...++||||+.+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999653 467899999976543 2345679999999999999999999999864 568899999999
Q ss_pred CcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCCCCc-
Q 007200 370 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH- 448 (613)
Q Consensus 370 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~- 448 (613)
|+|.++++... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++........
T Consensus 454 g~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 526 (635)
T 4fl3_A 454 GPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 526 (635)
T ss_dssp EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-----
T ss_pred CCHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccc
Confidence 99999997643 389999999999999999999999 9999999999999999999999999999876543221
Q ss_pred -eeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcccccccccCc
Q 007200 449 -VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSD 526 (613)
Q Consensus 449 -~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 526 (613)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.... . .+ +...+....
T Consensus 527 ~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~-----~---~~-~~~~i~~~~-------- 589 (635)
T 4fl3_A 527 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK-----G---SE-VTAMLEKGE-------- 589 (635)
T ss_dssp --------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----H---HH-HHHHHHTTC--------
T ss_pred ccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----H---HH-HHHHHHcCC--------
Confidence 2223346789999999999999999999999999999998 999995321 1 11 111111111
Q ss_pred cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 527 MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 527 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
....+..+...+.+++..||+.||++|||+.+|++.|++
T Consensus 590 -~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~ 628 (635)
T 4fl3_A 590 -RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 628 (635)
T ss_dssp -CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 111122334678999999999999999999999999975
No 183
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=9.7e-40 Score=336.16 Aligned_cols=249 Identities=23% Similarity=0.375 Sum_probs=205.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|.+.+.||+|+||.||++.+. +++.||+|++..... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357888999999999999999987 588999999875532 23345788999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+.+++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 192 (335)
T 2owb_A 120 LELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192 (335)
T ss_dssp ECCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecc
Confidence 99999999999987653 389999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.... ..+......... .
T Consensus 193 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~~~~~~~~~~~~-~---- 258 (335)
T 2owb_A 193 YDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC--------LKETYLRIKKNE-Y---- 258 (335)
T ss_dssp STTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS--------HHHHHHHHHHTC-C----
T ss_pred cCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC--------HHHHHHHHhcCC-C----
Confidence 3322 2334568999999999999999999999999999999999999996322 111111111111 0
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... ......+.+++.+||+.||++|||+.|+++
T Consensus 259 --~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 259 --SIP----KHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp --CCC----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred --CCC----ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 011 112356889999999999999999999987
No 184
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.3e-40 Score=335.20 Aligned_cols=256 Identities=20% Similarity=0.296 Sum_probs=188.4
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHH-HHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
..++|++.+.||+|+||+||+|.+. +|+.||+|+++.......... +..+...++.++||||+++++++.++...++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 3577899999999999999999975 789999999976544433333 44445557888999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+. |+|.+++.........+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99997 5888877653333345999999999999999999999853 89999999999999999999999999998654
Q ss_pred CCCCceeecccccccccccccc----ccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYL----STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
... ......||+.|+|||.+ .+..++.++||||||+++|||++|+.||.... . ....+.........
T Consensus 162 ~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~-~~~~~~~~~~~~~~ 232 (290)
T 3fme_A 162 DDV--AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG------T-PFQQLKQVVEEPSP 232 (290)
T ss_dssp ----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCS------C-HHHHHHHHHHSCCC
T ss_pred ccc--cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccC------c-hHHHHHHHhccCCC
Confidence 322 22334589999999996 55678999999999999999999999996211 0 11111122211111
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. . ........+.+++.+||+.||++|||+.|+++
T Consensus 233 ~------~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 233 Q------L---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp C------C---CTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred C------c---ccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1 0 01122356899999999999999999999987
No 185
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.3e-39 Score=334.49 Aligned_cols=255 Identities=19% Similarity=0.235 Sum_probs=199.1
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcc-cCccceeeEEEEc--CCceEEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMT--PTERLLV 363 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~lv 363 (613)
++|++.+.||+|+||+||+|.+. +++.||||+++.. ....+.+|+.++..+. ||||+++++++.+ ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 67889999999999999999875 7899999998643 3457889999999997 9999999999987 5678999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC-cEEEeccccceec
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF-EAVVGDFGLAKLM 442 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~-~~kl~DfGla~~~ 442 (613)
|||+.+++|.++++. +++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+|||+++..
T Consensus 112 ~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 999999999998853 78999999999999999999999 999999999999999776 8999999999876
Q ss_pred CCCCCceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
..... .....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.... ........+...........
T Consensus 182 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~----~~~~~l~~~~~~~~~~~~~~ 255 (330)
T 3nsz_A 182 HPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGH----DNYDQLVRIAKVLGTEDLYD 255 (330)
T ss_dssp CTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCS----SHHHHHHHHHHHHCHHHHHH
T ss_pred CCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCC----chHHHHHHHHHhcCCchhhh
Confidence 54322 234458999999999977 668999999999999999999999994221 11111111111111000000
Q ss_pred c-----------------------ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 522 L-----------------------VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 522 ~-----------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. ................+.+++.+||+.||++|||++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 0000011111223467899999999999999999999997
No 186
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.8e-40 Score=331.30 Aligned_cols=248 Identities=25% Similarity=0.368 Sum_probs=197.7
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEc----CCceE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMT----PTERL 361 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~ 361 (613)
..|.+.+.||+|+||+||+|.+. ++..||+|.+..... ......+.+|+.+++.++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 34677788999999999999976 688999999875543 3345578999999999999999999999865 35579
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeec-CCCcEEEecccc
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK--IIHRDVKAANILLD-EEFEAVVGDFGL 438 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~-~~~~~kl~DfGl 438 (613)
+||||+++++|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+||+++ .++.+||+|||+
T Consensus 106 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~ 178 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGL 178 (290)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred EEEEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence 9999999999999997653 389999999999999999999999 7 99999999999998 788999999999
Q ss_pred ceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccc
Q 007200 439 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 518 (613)
Q Consensus 439 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (613)
+...... ......||+.|+|||.+. +.++.++||||||+++|+|++|+.||.... ..............
T Consensus 179 ~~~~~~~---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-------~~~~~~~~~~~~~~ 247 (290)
T 1t4h_A 179 ATLKRAS---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ-------NAAQIYRRVTSGVK 247 (290)
T ss_dssp GGGCCTT---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS-------SHHHHHHHHTTTCC
T ss_pred ccccccc---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC-------cHHHHHHHHhccCC
Confidence 9754432 223456899999999886 458999999999999999999999995221 11122212111111
Q ss_pred ccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 519 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. .. .......+.+++..||+.||++|||+.|+++
T Consensus 248 ~~-~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 248 PA-SF--------DKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CG-GG--------GGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cc-cc--------CCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 11 01 1111246899999999999999999999987
No 187
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=8.8e-41 Score=336.71 Aligned_cols=258 Identities=29% Similarity=0.391 Sum_probs=196.9
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC--CCC--EEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT--DGS--LVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~--~~~--~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 360 (613)
.++|++.+.||+|+||+||+|++. +++ .||||+++.... ......+.+|+.+++.++||||+++++++.++. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 467889999999999999999853 333 689999875432 233557899999999999999999999987754 8
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
++||||+.+++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~ 169 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMR 169 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGG---GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred eeeEecccCCCHHHHHHhccC---CcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEccccccc
Confidence 999999999999999976432 389999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCce--eeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhcc
Q 007200 441 LMDYKDTHV--TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKEK 517 (613)
Q Consensus 441 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
......... .....++..|+|||.+.+..++.++||||||+++|||++ |+.||.... ..+.+.......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--------~~~~~~~~~~~~ 241 (291)
T 1u46_A 170 ALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN--------GSQILHKIDKEG 241 (291)
T ss_dssp ECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHTSC
T ss_pred cccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC--------HHHHHHHHHccC
Confidence 765433221 223447888999999998889999999999999999999 999995321 112222221111
Q ss_pred cccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 007200 518 KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 568 (613)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 568 (613)
.. ..........+.+++.+||+.||++|||+.++++.|+...
T Consensus 242 ~~---------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 242 ER---------LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp CC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CC---------CCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 10 0111223467899999999999999999999999998643
No 188
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=329.16 Aligned_cols=253 Identities=24% Similarity=0.351 Sum_probs=198.4
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEec
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPF 366 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 366 (613)
++|.....||+|+||.||+|.+. +++.||||.+..... .....+.+|+.+++.++||||+++++++.+....++||||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 100 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQ 100 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC----HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCch-HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEe
Confidence 34555668999999999999975 688999999875532 3456788999999999999999999999999999999999
Q ss_pred ccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-CCcEEEeccccceecCCC
Q 007200 367 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE-EFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 367 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-~~~~kl~DfGla~~~~~~ 445 (613)
+++++|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 101 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 101 VPGGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CSEEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred CCCCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 999999999976532 23478999999999999999999999 9999999999999987 899999999999876532
Q ss_pred CCceeeccccccccccccccccCC--CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 446 DTHVTTAVRGTIGHIAPEYLSTGK--SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
.. ......|++.|+|||.+.+.. ++.++||||||+++|||++|+.||..... . .......... . .
T Consensus 177 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~-~~~~~~~~~~-~-----~ 243 (295)
T 2clq_A 177 NP-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGE-----P-QAAMFKVGMF-K-----V 243 (295)
T ss_dssp -----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSS-----H-HHHHHHHHHH-C-----C
T ss_pred CC-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCc-----h-hHHHHhhccc-c-----c
Confidence 21 223455899999999997654 78999999999999999999999963210 0 0010000000 0 0
Q ss_pred cCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 524 DSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 524 ~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.+.. +......+.+++.+||+.||++|||+.++++
T Consensus 244 ~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 244 HPEI----PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCC----CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccc----cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111 1223357889999999999999999999986
No 189
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.5e-40 Score=343.00 Aligned_cols=257 Identities=21% Similarity=0.329 Sum_probs=200.5
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHH-HhhcccCccceeeEEEEcCCceEE
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEM-ISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
+..++|+..+.||+|+||+||+|.+. +|+.||||+++..........+..|..+ ++.++||||+++++++.+++..++
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 34467888899999999999999975 7899999999766544444556666665 678899999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+.+ +|.+++.........+++..+..++.||+.||+|||++. +|+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999975 998888753223345999999999999999999999743 8999999999999999999999999999765
Q ss_pred CCCCCceeecccccccccccccccc----CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLST----GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 518 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (613)
... .......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .....+........
T Consensus 205 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~-------~~~~~~~~~~~~~~ 275 (340)
T 3an0_A 205 VDS--VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWG-------TPFQQLKQVVEEPS 275 (340)
T ss_dssp SCH--HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCS-------CHHHHHHHHHHSCC
T ss_pred ccc--cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCcccc-------chHHHHHHHhcCCC
Confidence 422 11223459999999999643 468899999999999999999999996321 01112222221111
Q ss_pred ccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 519 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. . ........+.+++.+||+.||++|||+.|+++
T Consensus 276 ~~------~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 276 PQ------L---PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CC------C---CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CC------C---CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 10 0 11123457899999999999999999999987
No 190
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.5e-40 Score=344.36 Aligned_cols=263 Identities=18% Similarity=0.240 Sum_probs=195.8
Q ss_pred HHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcC-----
Q 007200 284 QVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP----- 357 (613)
Q Consensus 284 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 357 (613)
....++|.+.+.||+|+||+||+|.+. +|+.||||++...... ..+|+.+++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-----CCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-----HHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 455678999999999999999999975 7999999998654332 23799999999999999999998543
Q ss_pred ---------------------------------CceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHH
Q 007200 358 ---------------------------------TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAY 404 (613)
Q Consensus 358 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~ 404 (613)
...++||||+. |+|.+.+.........+++..+..++.||++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 33789999998 58887776533333459999999999999999999
Q ss_pred HHhcCCCCeEecCCCCCceeec-CCCcEEEeccccceecCCCCCceeeccccccccccccccccCC-CCCcccchhHHHH
Q 007200 405 LHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGVM 482 (613)
Q Consensus 405 LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwS~G~i 482 (613)
||+. +|+||||||+||+++ .++.+||+|||+++....... .....||+.|+|||.+.+.. ++.++||||+||+
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i 231 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCV 231 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHH
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHH
Confidence 9999 999999999999998 688999999999987643322 23445899999999987754 8999999999999
Q ss_pred HHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc----------cccccCccCCC-----CcHHHHHHHHHHHHHcc
Q 007200 483 LLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL----------EQLVDSDMEGN-----YIEEEVEQLIQVALLCT 547 (613)
Q Consensus 483 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-----~~~~~~~~l~~li~~cl 547 (613)
+|||++|+.||.... .......+......... ....-+..... .+......+.+++.+||
T Consensus 232 l~ell~g~~pf~~~~-----~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L 306 (383)
T 3eb0_A 232 FGELILGKPLFSGET-----SIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQIL 306 (383)
T ss_dssp HHHHHHSSCSSCCSS-----HHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHC
T ss_pred HHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHc
Confidence 999999999996321 11111111111110000 00000000000 11123456899999999
Q ss_pred CCCCCCCCCHHHHHH
Q 007200 548 QGSPMERPKMSEVVR 562 (613)
Q Consensus 548 ~~dP~~RPt~~evl~ 562 (613)
+.||++|||+.|+++
T Consensus 307 ~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 307 RYEPDLRINPYEAMA 321 (383)
T ss_dssp CSSGGGSCCHHHHHT
T ss_pred cCChhhCCCHHHHhc
Confidence 999999999999987
No 191
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.8e-41 Score=351.06 Aligned_cols=244 Identities=14% Similarity=0.121 Sum_probs=190.4
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHH---HHhhcccCccceee-------EE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVE---MISMAVHRNLLRLR-------GF 353 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~---~l~~l~h~niv~l~-------~~ 353 (613)
.++|.+.+.||+|+||+||+|.+. +|+.||||++.... .......+.+|+. +++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 467888899999999999999964 69999999997542 2234567889994 55566899999998 76
Q ss_pred EEcCCc-----------------eEEEEecccCCcchhhhhccCCC---CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 007200 354 CMTPTE-----------------RLLVYPFMVNGSVASCLRERGQS---QPPLNWSVRKQIALGAARGLAYLHDHCDPKI 413 (613)
Q Consensus 354 ~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~i 413 (613)
+.+++. .+++|||+ +|+|.+++...... ...+++..+..++.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 665532 78999999 68999999764221 11244688899999999999999999 99
Q ss_pred EecCCCCCceeecCCCcEEEeccccceecCCCCCceeeccccccccccccccccC-----------CCCCcccchhHHHH
Q 007200 414 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-----------KSSEKTDVFGYGVM 482 (613)
Q Consensus 414 vH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DVwS~G~i 482 (613)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||.+.+. .++.++|||||||+
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i 302 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence 9999999999999999999999999985332 3344557 999999999887 89999999999999
Q ss_pred HHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 483 LLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 483 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
+|||++|+.||....... ....+.... ......+.+++.+||+.||++|||+.|+++
T Consensus 303 l~elltg~~Pf~~~~~~~-----------------~~~~~~~~~------~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 303 IYWIWCADLPITKDAALG-----------------GSEWIFRSC------KNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHSSCCC------C-----------------CSGGGGSSC------CCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHCCCCCccccccc-----------------chhhhhhhc------cCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999996322110 011111100 112357889999999999999999999987
No 192
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=343.64 Aligned_cols=260 Identities=18% Similarity=0.212 Sum_probs=202.5
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCC---------CCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccce--------
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTD---------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLR-------- 349 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-------- 349 (613)
.++|.+.+.||+|+||.||+|++.. ++.||+|++... ..+.+|++++.+++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~ 114 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYST 114 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTC
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccC
Confidence 3678999999999999999999763 789999998654 24778999999999999988
Q ss_pred -------eeEEEEc-CCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 007200 350 -------LRGFCMT-PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAA 421 (613)
Q Consensus 350 -------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 421 (613)
+++++.. +...++||||+ +++|.+++.... ...+++..+..++.||+.||+|||++ +|+||||||+
T Consensus 115 ~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~ 188 (352)
T 2jii_A 115 PLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAE 188 (352)
T ss_dssp TTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGG
T ss_pred CccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHH
Confidence 6777765 67889999999 999999998642 12499999999999999999999999 9999999999
Q ss_pred ceeecCCC--cEEEeccccceecCCCCCc------eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCc
Q 007200 422 NILLDEEF--EAVVGDFGLAKLMDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 493 (613)
Q Consensus 422 NIll~~~~--~~kl~DfGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~ 493 (613)
||+++.++ .+||+|||+++........ ......||+.|+|||.+.+..++.++|||||||++|||++|+.||
T Consensus 189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 268 (352)
T 2jii_A 189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPW 268 (352)
T ss_dssp GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTT
T ss_pred HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCc
Confidence 99999998 8999999999866532211 123346999999999999999999999999999999999999999
Q ss_pred ccccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 494 DLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
..... .............. ....+...... .......+.+++..||+.||++|||+.++++.|++
T Consensus 269 ~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 333 (352)
T 2jii_A 269 TNCLP---NTEDIMKQKQKFVD--KPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEA 333 (352)
T ss_dssp GGGTT---CHHHHHHHHHHHHH--SCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHH
T ss_pred ccCCc---CHHHHHHHHHhccC--Chhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHH
Confidence 64321 11111222111111 11111111100 01123578999999999999999999999999975
No 193
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.9e-39 Score=348.51 Aligned_cols=194 Identities=24% Similarity=0.369 Sum_probs=154.4
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEcC-----Cce
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTP-----TER 360 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 360 (613)
++|.+.+.||+|+||+||+|.+. +|+.||||++...... .....+.+|+.+++.++||||+++++++... ...
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 67999999999999999999976 7899999999754332 2345788999999999999999999998543 568
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
++||||+ +++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEecc-ccchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccch
Confidence 9999998 578999887543 389999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCC--------------------------ceeecccccccccccccc-ccCCCCCcccchhHHHHHHHHHhC
Q 007200 441 LMDYKDT--------------------------HVTTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGVMLLELITG 489 (613)
Q Consensus 441 ~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DVwS~G~il~elltg 489 (613)
....... .......||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 7643211 122345689999999986 456799999999999999999993
No 194
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=327.43 Aligned_cols=251 Identities=24% Similarity=0.352 Sum_probs=199.6
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
..++|++.+.||+|+||.||+|.+. +|+.||+|.+.... ....+.+|+.++..++||||+++++++..+...++||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 4567999999999999999999986 58999999997543 2356889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDY 444 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~ 444 (613)
||+.+++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++.....
T Consensus 104 e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 177 (314)
T 3com_A 104 EYCGAGSVSDIIRLRN---KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD 177 (314)
T ss_dssp ECCTTEEHHHHHHHHT---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred ecCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence 9999999999987433 2489999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccccc
Q 007200 445 KDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVD 524 (613)
Q Consensus 445 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (613)
... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||.... ............. ...
T Consensus 178 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~-~~~-- 245 (314)
T 3com_A 178 TMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIH--------PMRAIFMIPTNPP-PTF-- 245 (314)
T ss_dssp TBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSCC-CCC--
T ss_pred hcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--------hHHHHHHHhcCCC-ccc--
Confidence 322 2234458999999999999999999999999999999999999996321 1111111111110 000
Q ss_pred CccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 525 SDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 525 ~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.........+.+++.+||+.||++|||+.++++
T Consensus 246 -----~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 246 -----RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -----SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -----CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 011122357899999999999999999999987
No 195
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.4e-39 Score=334.36 Aligned_cols=257 Identities=20% Similarity=0.333 Sum_probs=205.0
Q ss_pred HHHHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc-------cHHHHHHHHHHHhhc-ccCccceeeE
Q 007200 282 ELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-------GELQFQTEVEMISMA-VHRNLLRLRG 352 (613)
Q Consensus 282 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l-~h~niv~l~~ 352 (613)
......++|.+.+.||+|+||.||+|.+. +|+.||||++....... ....+.+|+.++..+ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 34455678999999999999999999986 79999999987543211 134578899999999 7999999999
Q ss_pred EEEcCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 007200 353 FCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 432 (613)
Q Consensus 353 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 432 (613)
++......++||||+.+++|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+|
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEKV----ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEE
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEE
Confidence 9999999999999999999999997643 389999999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCCCceeecccccccccccccccc------CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchH
Q 007200 433 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 506 (613)
Q Consensus 433 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~ 506 (613)
|+|||++....... ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .
T Consensus 241 l~DfG~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~-----~--- 310 (365)
T 2y7j_A 241 LSDFGFSCHLEPGE--KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRR-----Q--- 310 (365)
T ss_dssp ECCCTTCEECCTTC--CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----H---
T ss_pred EEecCcccccCCCc--ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCC-----H---
Confidence 99999998765432 2234569999999999864 357889999999999999999999995321 1
Q ss_pred HHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 507 LDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
......... .... ...+. .......+.+++.+||+.||++|||+.|+++
T Consensus 311 ~~~~~~i~~-~~~~-~~~~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 311 ILMLRMIME-GQYQ-FSSPE-----WDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHHHHH-TCCC-CCHHH-----HSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHh-CCCC-CCCcc-----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111 1100 00000 0012356889999999999999999999987
No 196
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.9e-39 Score=336.56 Aligned_cols=262 Identities=20% Similarity=0.306 Sum_probs=201.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcC-----Cce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-----TER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 360 (613)
.++|.+.+.||+|+||.||+|.+. +++.||||++...........+.+|++++..++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 467999999999999999999976 68899999997655444456789999999999999999999999764 367
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
++||||+. |+|.++++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~ 176 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLAR 176 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceE
Confidence 99999997 5899988753 389999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCce--eecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc
Q 007200 441 LMDYKDTHV--TTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 517 (613)
Q Consensus 441 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
......... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .......+.......
T Consensus 177 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~~~ 251 (364)
T 3qyz_A 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKH-----YLDQLNHILGILGSP 251 (364)
T ss_dssp ECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSS-----GGGHHHHHHHHHCSC
T ss_pred ecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCC-----hHHHHHHHHHHhCCC
Confidence 765332211 233469999999998755 458999999999999999999999996322 111222221111111
Q ss_pred ccc---cc--------ccC-ccCCCC-----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 518 KLE---QL--------VDS-DMEGNY-----IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 518 ~~~---~~--------~~~-~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... .. ... ...... .......+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 252 SQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp CHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000 00 000 000000 0112356889999999999999999999987
No 197
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.4e-39 Score=330.29 Aligned_cols=250 Identities=23% Similarity=0.380 Sum_probs=201.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|.+.+.||+|+||.||+++.. +|+.||+|+++..... ....+.+|+.+++.++||||+++++++.+....++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF-RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 467889999999999999999976 7899999999754322 33568899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEeccccceec
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfGla~~~ 442 (613)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 87 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 87 LVSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp CCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred cCCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 999999999987654 389999999999999999999999 99999999999999 78889999999999754
Q ss_pred CCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQL 522 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (613)
... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.... . ........... ..
T Consensus 160 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~---~~~~~~i~~~~-~~-- 225 (304)
T 2jam_A 160 QNG---IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET-----E---SKLFEKIKEGY-YE-- 225 (304)
T ss_dssp CCB---TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC-----H---HHHHHHHHHCC-CC--
T ss_pred CCC---ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC-----H---HHHHHHHHcCC-CC--
Confidence 322 1233458999999999999999999999999999999999999995321 1 11111111111 00
Q ss_pred ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 523 VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 523 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
............+.+++.+||+.||++|||+.|+++
T Consensus 226 ----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 226 ----FESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp ----CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred ----CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000111123457899999999999999999999987
No 198
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.7e-39 Score=336.62 Aligned_cols=263 Identities=22% Similarity=0.321 Sum_probs=199.7
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEcC--------
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTP-------- 357 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-------- 357 (613)
++|.+.+.||+|+||+||+|++. +|+.||||++...... .....+.+|+.+++.++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 67899999999999999999985 7899999998655432 2345678999999999999999999998863
Q ss_pred CceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccc
Q 007200 358 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 437 (613)
Q Consensus 358 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 437 (613)
...++||||+.+ +|.+.+..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ceEEEEEeccCC-CHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 467999999975 77777655432 389999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCC---Cceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHH
Q 007200 438 LAKLMDYKD---THVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 513 (613)
Q Consensus 438 la~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 513 (613)
+++...... ........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .......+...
T Consensus 170 ~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~ 244 (351)
T 3mi9_A 170 LARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT-----EQHQLALISQL 244 (351)
T ss_dssp TCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHH
T ss_pred hcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHH
Confidence 998765322 122234568999999999876 457999999999999999999999996321 11122222221
Q ss_pred hhcc---cccccccCc---------cCCCCcHHH------HHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 514 LKEK---KLEQLVDSD---------MEGNYIEEE------VEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 514 ~~~~---~~~~~~~~~---------~~~~~~~~~------~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.... ......... ......... ...+.+++.+||+.||++|||++|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 245 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp HCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 1111 000000000 000011111 245889999999999999999999998
No 199
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2e-40 Score=346.20 Aligned_cols=254 Identities=11% Similarity=0.017 Sum_probs=181.8
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc--ccHHHHHHHHHHHhhc--ccCccceee-------EEEE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMA--VHRNLLRLR-------GFCM 355 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l--~h~niv~l~-------~~~~ 355 (613)
.+|...+.||+|+||+||+|.+. +|+.||||++...... .....+.+|+.++..+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 45888899999999999999976 7899999999875432 2344577785555544 699987755 4544
Q ss_pred cC-----------------CceEEEEecccCCcchhhhhccCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCC
Q 007200 356 TP-----------------TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVR------KQIALGAARGLAYLHDHCDPK 412 (613)
Q Consensus 356 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~i~~~L~~LH~~~~~~ 412 (613)
.+ ...++||||+. |+|.+++...+. .+.+..+ ..++.||+.||+|||++ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 33 23799999998 899999986432 2444555 67789999999999999 9
Q ss_pred eEecCCCCCceeecCCCcEEEeccccceecCCCCCceeecccccccccccccccc--CCCCCcccchhHHHHHHHHHhCC
Q 007200 413 IIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQ 490 (613)
Q Consensus 413 ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwS~G~il~elltg~ 490 (613)
|+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||.+.+ ..++.++|||||||++|||++|+
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~ 290 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLF 290 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTC----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCC----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999986542 1224457799999999987 67899999999999999999999
Q ss_pred CCcccccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 491 RAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 491 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.||.......... .........................+.+++.+||+.||++|||+.++++
T Consensus 291 ~Pf~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 291 LPFGLVTPGIKGS----------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp CSTTBCCTTCTTC----------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCcCcccccc----------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9997432111000 0000000001111111111233467899999999999999999999976
No 200
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.4e-39 Score=329.77 Aligned_cols=252 Identities=21% Similarity=0.316 Sum_probs=198.4
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
.++|++.+.||+|+||.||+|.+. +++.||+|++.... ......+.+|+.+++.++||||+++++++..+...++|||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 467899999999999999999987 58999999987543 3345678899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp CCTTEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred eCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999876432 389999999999999999999999 9999999999999999999999999987533211
Q ss_pred CCceeeccccccccccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccccc
Q 007200 446 DTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 520 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (613)
........|++.|+|||.+. +..++.++||||||+++|+|++|+.||.... ...............
T Consensus 171 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~~ 241 (302)
T 2j7t_A 171 -LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--------PMRVLLKIAKSDPPT 241 (302)
T ss_dssp -HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC--------HHHHHHHHHHSCCCC
T ss_pred -ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC--------HHHHHHHHhccCCcc
Confidence 11122345899999999983 6678999999999999999999999996322 111111211111110
Q ss_pred ccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 521 QLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. .........+.+++..||+.||++|||+.++++
T Consensus 242 -~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 242 -L-------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -C-------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -c-------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0 011223457899999999999999999999987
No 201
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=340.97 Aligned_cols=256 Identities=25% Similarity=0.375 Sum_probs=197.1
Q ss_pred HHHHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEc---
Q 007200 282 ELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMT--- 356 (613)
Q Consensus 282 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~--- 356 (613)
++....++|.+.+.||+|+||.||+|.+. +|+.||||++..... ....+.+|+.++..+ +||||+++++++..
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 95 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP 95 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS--TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC-
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc--cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC
Confidence 33445678999999999999999999975 789999999865432 345788999999998 79999999999976
Q ss_pred ---CCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEE
Q 007200 357 ---PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 433 (613)
Q Consensus 357 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl 433 (613)
....++||||+.+|+|.+++.... ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 96 PGMDDQLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp -CCCCEEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEE
T ss_pred ccccceEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEE
Confidence 467899999999999999997643 22489999999999999999999999 9999999999999999999999
Q ss_pred eccccceecCCCCCceeeccccccccccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHH
Q 007200 434 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 508 (613)
Q Consensus 434 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~ 508 (613)
+|||++........ ......|++.|+|||.+. +..++.++|||||||++|+|++|+.||.... ...
T Consensus 171 ~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~ 241 (326)
T 2x7f_A 171 VDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH--------PMR 241 (326)
T ss_dssp CCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSC--------HHH
T ss_pred eeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCc--------HHH
Confidence 99999986543221 223345899999999987 5668999999999999999999999995221 111
Q ss_pred HHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 509 WVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
......... ..... .......+.+++.+||..||++|||+.++++
T Consensus 242 ~~~~~~~~~-~~~~~--------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 242 ALFLIPRNP-APRLK--------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HHHHHHHSC-CCCCS--------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHhhcCc-cccCC--------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111111 11110 1112357889999999999999999999988
No 202
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.4e-39 Score=343.56 Aligned_cols=200 Identities=23% Similarity=0.322 Sum_probs=167.6
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEcC-----Cc
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTP-----TE 359 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 359 (613)
.++|.+.+.||+|+||.||+|.+. +|+.||||++...... .....+.+|+.+++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 468999999999999999999976 6889999999754332 2345788999999999999999999998765 56
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||||+. |+|.++++... .+++..+..++.||++||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla 176 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLA 176 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEecCC-cCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCc
Confidence 899999986 59999987543 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCc---------------------eeecccccccccccccc-ccCCCCCcccchhHHHHHHHHHhCCCCcc
Q 007200 440 KLMDYKDTH---------------------VTTAVRGTIGHIAPEYL-STGKSSEKTDVFGYGVMLLELITGQRAFD 494 (613)
Q Consensus 440 ~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~DVwS~G~il~elltg~~p~~ 494 (613)
+........ ......||+.|+|||++ .+..++.++|||||||++|||++|..||.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 177 RTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred ccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 876533211 12456699999999986 55669999999999999999998666553
No 203
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.9e-39 Score=348.58 Aligned_cols=252 Identities=23% Similarity=0.301 Sum_probs=202.6
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc-CcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER-TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
.++|.+.+.||+|+||+||+|.+. +++.||||++.... .......+.+|+++++.++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467999999999999999999986 78999999986543 2234567899999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec---CCCcEEEecccccee
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD---EEFEAVVGDFGLAKL 441 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~---~~~~~kl~DfGla~~ 441 (613)
||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++ .++.+||+|||+++.
T Consensus 101 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 9999999999887654 389999999999999999999999 999999999999995 456799999999986
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 442 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 442 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
..... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... ..+.+...........
T Consensus 174 ~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~~~ 242 (486)
T 3mwu_A 174 FQQNT--KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVETGKYAFD 242 (486)
T ss_dssp BCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCCSC
T ss_pred CCCCC--ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCCCC
Confidence 54322 2334569999999999875 58999999999999999999999995321 1111222111111000
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
..........+.+++.+||+.||++|||+.|+++.
T Consensus 243 -------~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 243 -------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp -------SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred -------CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00111234578899999999999999999999874
No 204
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=5.7e-39 Score=348.81 Aligned_cols=251 Identities=24% Similarity=0.307 Sum_probs=200.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc------------ccHHHHHHHHHHHhhcccCccceeeEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ------------GGELQFQTEVEMISMAVHRNLLRLRGF 353 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~e~~~l~~l~h~niv~l~~~ 353 (613)
.++|.+.+.||+|+||+||+|... +++.||+|++...... .....+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 578999999999999999999976 6889999999754322 234578899999999999999999999
Q ss_pred EEcCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC---c
Q 007200 354 CMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF---E 430 (613)
Q Consensus 354 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---~ 430 (613)
+.++...++||||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++ .
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999987654 389999999999999999999999 999999999999999876 6
Q ss_pred EEEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007200 431 AVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 510 (613)
Q Consensus 431 ~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 510 (613)
+||+|||+++...... ......||+.|+|||.+. +.++.++||||+||++|+|++|+.||.... ..+.+
T Consensus 188 ~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~ 256 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKDY--KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN--------DQDII 256 (504)
T ss_dssp EEECCCTTCEECCTTS--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHH
T ss_pred EEEEECCCCEEcCCCC--ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC--------HHHHH
Confidence 9999999998765432 233456999999999986 568999999999999999999999996321 11222
Q ss_pred HHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 511 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
............ . ........+.+++..||+.||++|||+.|+++
T Consensus 257 ~~i~~~~~~~~~---~----~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 257 KKVEKGKYYFDF---N----DWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHHHHCCCCCCH---H----HHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHcCCCCCCc---c----ccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 222111110000 0 00112357899999999999999999999986
No 205
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=3.3e-39 Score=322.66 Aligned_cols=249 Identities=23% Similarity=0.395 Sum_probs=196.5
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
..++|.+.+.||+|+||.||+|.+. +|+.||||++.... .......+.+|+.+++.++||||+++++++.++...++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 3467889999999999999999987 79999999986542 12235578899999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
||||+.+++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++...
T Consensus 89 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~ 161 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMM 161 (276)
T ss_dssp EEECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred EEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeeccccccc
Confidence 999999999999997654 389999999999999999999999 9999999999999999999999999999865
Q ss_pred CCCCCceeeccccccccccccccccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 443 DYKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 443 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
.... ......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||.... ........ .....
T Consensus 162 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~-~~~~~-- 228 (276)
T 2h6d_A 162 SDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH--------VPTLFKKI-RGGVF-- 228 (276)
T ss_dssp CC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHH-HHCCC--
T ss_pred CCCc--ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc--------HHHHHHHh-hcCcc--
Confidence 4322 2233458999999999987765 689999999999999999999996321 11111111 11110
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. +......+.+++.+||+.||++|||+.|+++
T Consensus 229 ----~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 229 ----YI----PEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp ----CC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ----cC----chhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 00 1112356889999999999999999999988
No 206
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-40 Score=339.58 Aligned_cols=255 Identities=24% Similarity=0.295 Sum_probs=185.5
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcc-cCccceeeEEEE--------
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCM-------- 355 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~-------- 355 (613)
...+|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.++.++. ||||+++++++.
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 3457889999999999999999976 78999999985542 334557889999999996 999999999984
Q ss_pred cCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCceeecCCCcEEE
Q 007200 356 TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPK--IIHRDVKAANILLDEEFEAVV 433 (613)
Q Consensus 356 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~--ivH~Dlk~~NIll~~~~~~kl 433 (613)
.....+++|||+. |+|.+++..... ..++++..+..++.||+.||+|||++ + |+||||||+|||++.++.+||
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 2344789999995 799998865322 22499999999999999999999998 8 999999999999999999999
Q ss_pred eccccceecCCCCCce-----------eecccccccccccccc---ccCCCCCcccchhHHHHHHHHHhCCCCccccccc
Q 007200 434 GDFGLAKLMDYKDTHV-----------TTAVRGTIGHIAPEYL---STGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 499 (613)
Q Consensus 434 ~DfGla~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~ 499 (613)
+|||+++......... .....||+.|+|||.+ .+..++.++|||||||++|||++|+.||......
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~ 259 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC------
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH
Confidence 9999998765432211 1134589999999998 5667889999999999999999999999632210
Q ss_pred CCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 500 NDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
..+... . ... ........+.+++..||+.||++|||+.|+++.|+..
T Consensus 260 --------~~~~~~-----~----~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 260 --------RIVNGK-----Y----SIP----PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp -------------------C----CCC----TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred --------HhhcCc-----c----cCC----cccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 000000 0 000 0011123478899999999999999999999999754
No 207
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.3e-39 Score=327.71 Aligned_cols=263 Identities=22% Similarity=0.323 Sum_probs=199.4
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEEe
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 365 (613)
++|+..+.||+|+||.||+|+.. +|+.||||+++..... .....+.+|+.++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888999999999999999987 7899999998754322 223568899999999999999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCC
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 445 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~ 445 (613)
|+. ++|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++......
T Consensus 83 ~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp CCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred ccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 997 699999876532 2389999999999999999999999 9999999999999999999999999999766432
Q ss_pred CCceeeccccccccccccccccCC-CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhc-cc--ccc
Q 007200 446 DTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-KK--LEQ 521 (613)
Q Consensus 446 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~ 521 (613)
.. ......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||.... .......+...... .. ...
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 230 (299)
T 2r3i_A 157 VR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDS-----EIDQLFRIFRTLGTPDEVVWPG 230 (299)
T ss_dssp SB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCCCTTTSTT
T ss_pred cc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHHHhCCCchhhhhH
Confidence 21 222345899999999998765 7899999999999999999999996322 11111111111100 00 000
Q ss_pred c-----ccCccCC---CC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 522 L-----VDSDMEG---NY----IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 522 ~-----~~~~~~~---~~----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. ..+.... .. .......+.+++.+|++.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0 0000000 00 0112367889999999999999999999987
No 208
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=4.2e-39 Score=349.00 Aligned_cols=251 Identities=25% Similarity=0.325 Sum_probs=198.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
.++|...+.||+|+||+||+|++. ++..||+|++..... ......+.+|+.+++.++||||+++++++.+....++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 457889999999999999999986 788999999976532 223457889999999999999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---CcEEEecccccee
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLAKL 441 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfGla~~ 441 (613)
||+.+|+|.+++.... ++++..+..++.||+.||+|||++ +|+||||||+|||++.. +.+||+|||+++.
T Consensus 116 e~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 116 ECYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999887654 389999999999999999999999 99999999999999764 4599999999987
Q ss_pred cCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc
Q 007200 442 MDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ 521 (613)
Q Consensus 442 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 521 (613)
..... ......||+.|+|||++. +.++.++||||+||++|+|++|+.||.... ..+...........
T Consensus 189 ~~~~~--~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~--------~~~~~~~i~~~~~~-- 255 (494)
T 3lij_A 189 FENQK--KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT--------DQEILRKVEKGKYT-- 255 (494)
T ss_dssp CBTTB--CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHTCCC--
T ss_pred CCCCc--cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHhCCCC--
Confidence 65332 233456999999999885 568999999999999999999999996322 11222222111110
Q ss_pred cccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 522 LVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 522 ~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.... ........+.+++..||+.||++|||+.|+++
T Consensus 256 -~~~~----~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 256 -FDSP----EWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp -CCSG----GGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -CCch----hcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 0000 01122356889999999999999999999986
No 209
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.4e-40 Score=368.90 Aligned_cols=260 Identities=22% Similarity=0.345 Sum_probs=206.5
Q ss_pred HHHHHhhCCCCCCccccCcCcEEEEEEeCC----CCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcC
Q 007200 282 ELQVATDNFSNRNILGRGGFGKVYKGRLTD----GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 357 (613)
Q Consensus 282 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 357 (613)
+..+..++|.+.+.||+|+||+||+|.+.. +..||||.++..........+.+|+.+++.++||||+++++++. +
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 344455778889999999999999998752 45799999876555545567999999999999999999999984 4
Q ss_pred CceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccc
Q 007200 358 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFG 437 (613)
Q Consensus 358 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 437 (613)
+..++||||+++|+|.++++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG 536 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFG 536 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecC
Confidence 678999999999999999976432 489999999999999999999999 99999999999999999999999999
Q ss_pred cceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHhhc
Q 007200 438 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLLKE 516 (613)
Q Consensus 438 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 516 (613)
+++..............+++.|+|||.+.+..++.++|||||||++|||++ |..||.... ..+.+......
T Consensus 537 ~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~--------~~~~~~~i~~~ 608 (656)
T 2j0j_A 537 LSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--------NNDVIGRIENG 608 (656)
T ss_dssp CCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--------HHHHHHHHHHT
T ss_pred CCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCC--------HHHHHHHHHcC
Confidence 998765443333334457789999999999999999999999999999997 999996321 11112121111
Q ss_pred ccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhc
Q 007200 517 KKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEG 566 (613)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~ 566 (613)
... ..+......+.+++.+||+.||++|||+.++++.|+.
T Consensus 609 ~~~----------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~ 648 (656)
T 2j0j_A 609 ERL----------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLST 648 (656)
T ss_dssp CCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCC----------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 111 0112234678999999999999999999999999975
No 210
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2e-39 Score=350.82 Aligned_cols=252 Identities=25% Similarity=0.335 Sum_probs=204.9
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
..++|.+.+.||+|+||+||+|... +|+.||||++..... ......+.+|+.+++.++||||+++++++.+....++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 3467999999999999999999987 789999999865432 3346678999999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEeccccc
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLA 439 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfGla 439 (613)
||||+.+|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||++
T Consensus 104 v~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EECCCCSCBHHHHHHTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 999999999999987643 389999999999999999999999 99999999999999 56789999999999
Q ss_pred eecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 440 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 440 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
+...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.... . .+.+.........
T Consensus 177 ~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~---~~~~~~i~~~~~~ 245 (484)
T 3nyv_A 177 THFEASK--KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN-----E---YDILKKVEKGKYT 245 (484)
T ss_dssp HHBCCCC--SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----H---HHHHHHHHHCCCC
T ss_pred EEccccc--ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC-----H---HHHHHHHHcCCCC
Confidence 8665332 2234569999999999866 68999999999999999999999996321 1 1112222111110
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. ..........+.+++.+||+.||++|||+.|+++
T Consensus 246 ~~-------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 246 FE-------LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CC-------SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC-------CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 00 0011223457889999999999999999999986
No 211
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.1e-38 Score=342.04 Aligned_cols=260 Identities=18% Similarity=0.243 Sum_probs=203.9
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhccc-CccceeeEEEEcCCceEEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH-RNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 364 (613)
.++|.+.+.||+|+||.||+|.+. +++.||||++...... ..+..|++++..+.| +++..+..++......++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~---~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH---PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS---CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc---HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 468999999999999999999975 7899999988654332 247789999999987 55666666777788889999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee---cCCCcEEEecccccee
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL---DEEFEAVVGDFGLAKL 441 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll---~~~~~~kl~DfGla~~ 441 (613)
||+ +++|.+++..... .+++..++.|+.||+.||+|||++ +|+||||||+|||+ +.++.+||+|||+++.
T Consensus 83 e~~-g~sL~~ll~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred ECC-CCCHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 999 9999999975432 499999999999999999999999 99999999999999 6889999999999987
Q ss_pred cCCCCCc------eeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhh
Q 007200 442 MDYKDTH------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 515 (613)
Q Consensus 442 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 515 (613)
....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... .........+.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~--~~~~~~~~~i~~~~~ 233 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKA--GTKKQKYEKISEKKV 233 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC--SSHHHHHHHHHHHHH
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc--hhHHHHHHHHhhccc
Confidence 6543321 12245699999999999999999999999999999999999999963221 111111111111111
Q ss_pred cccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 516 EKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 516 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
...+..+. ......+.+++..||+.||++||++.+|++.|++.
T Consensus 234 ~~~~~~l~---------~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 234 ATSIEALC---------RGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HSCHHHHH---------TTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred cccHHHHh---------cCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 11111110 11235789999999999999999999999999764
No 212
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=8.9e-40 Score=338.26 Aligned_cols=259 Identities=22% Similarity=0.320 Sum_probs=203.7
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCccc----------------HHHHHHHHHHHhhcccCcccee
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGG----------------ELQFQTEVEMISMAVHRNLLRL 350 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----------------~~~~~~e~~~l~~l~h~niv~l 350 (613)
.++|.+.+.||+|+||.||+|.+ +|+.||||.+........ ...+.+|+.++..++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999999 899999999975432111 1678999999999999999999
Q ss_pred eEEEEcCCceEEEEecccCCcchhh------hhccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCce
Q 007200 351 RGFCMTPTERLLVYPFMVNGSVASC------LRERGQSQPPLNWSVRKQIALGAARGLAYLHD-HCDPKIIHRDVKAANI 423 (613)
Q Consensus 351 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~NI 423 (613)
++++.+++..++||||+++|+|.++ +.... ...+++..+..++.|++.||+|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999999 54321 3459999999999999999999999 8 999999999999
Q ss_pred eecCCCcEEEeccccceecCCCCCceeeccccccccccccccccC-CCCC-cccchhHHHHHHHHHhCCCCcccccccCC
Q 007200 424 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSE-KTDVFGYGVMLLELITGQRAFDLARLAND 501 (613)
Q Consensus 424 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DVwS~G~il~elltg~~p~~~~~~~~~ 501 (613)
+++.++.+||+|||++...... ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||.....
T Consensus 184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--- 257 (348)
T 2pml_X 184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS--- 257 (348)
T ss_dssp EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSC---
T ss_pred EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc---
Confidence 9999999999999999876432 33445689999999999887 5665 99999999999999999999963221
Q ss_pred CcchHHHHHHHHhhccccccccc------CccC---CCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 502 DDVMLLDWVKGLLKEKKLEQLVD------SDME---GNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. .+........ ......+ +... ..........+.+++.+||+.||++|||+.|+++
T Consensus 258 -~---~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 258 -L---VELFNNIRTK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp -S---HHHHHHHTSC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -H---HHHHHHHhcc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 1111111111 1100000 0000 0001223467899999999999999999999988
No 213
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.5e-39 Score=331.20 Aligned_cols=254 Identities=24% Similarity=0.335 Sum_probs=196.9
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-------cccHHHHHHHHHHHhhcccCccceeeEEEEcC
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-------QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP 357 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 357 (613)
..++|.+.+.||+|+||.||+|.+. +++.||||++..... ......+.+|+++++.++||||+++++++..+
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 4567999999999999999999976 688999999875431 11223578999999999999999999998765
Q ss_pred CceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc---EEEe
Q 007200 358 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVG 434 (613)
Q Consensus 358 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~ 434 (613)
. .++||||+++++|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEEC
T ss_pred c-eEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEc
Confidence 4 899999999999999886543 489999999999999999999999 9999999999999987654 9999
Q ss_pred ccccceecCCCCCceeeccccccccccccccc---cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007200 435 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 511 (613)
Q Consensus 435 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 511 (613)
|||+++..... .......||+.|+|||.+. ...++.++|||||||++|+|++|+.||..... .......+.
T Consensus 160 Dfg~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~ 233 (322)
T 2ycf_A 160 DFGHSKILGET--SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT----QVSLKDQIT 233 (322)
T ss_dssp CCTTCEECCCC--HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTC----SSCHHHHHH
T ss_pred cCccceecccc--cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----HHHHHHHHH
Confidence 99999876432 1223445899999999974 45688999999999999999999999963221 111222111
Q ss_pred HHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 512 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
. ..... .+.. .......+.+++.+||+.||++|||+.++++.
T Consensus 234 ~----~~~~~--~~~~----~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 234 S----GKYNF--IPEV----WAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp H----TCCCC--CHHH----HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred h----Ccccc--Cchh----hhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 1 11000 0000 01123578999999999999999999999873
No 214
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.2e-39 Score=339.27 Aligned_cols=265 Identities=21% Similarity=0.243 Sum_probs=201.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcc--------cCccceeeEEEE--
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV--------HRNLLRLRGFCM-- 355 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~-- 355 (613)
.++|.+.+.||+|+||+||+|.+. +++.||||+++.. ......+.+|+.+++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA--EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC--CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 478999999999999999999976 6889999999743 223456889999999886 788999999987
Q ss_pred --cCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCC----
Q 007200 356 --TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEF---- 429 (613)
Q Consensus 356 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~---- 429 (613)
+....++||||+ ++++.+++..... ..+++..++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNY--QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhh
Confidence 556789999999 5566666654322 24899999999999999999999964 799999999999999775
Q ss_pred ---------------------------------------------cEEEeccccceecCCCCCceeeccccccccccccc
Q 007200 430 ---------------------------------------------EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEY 464 (613)
Q Consensus 430 ---------------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~ 464 (613)
.+||+|||+++..... .....||+.|+|||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCChh
Confidence 7999999999876432 233458999999999
Q ss_pred cccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCC-cchHHHHHHHHhhcc---------cccccccCc--------
Q 007200 465 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD-DVMLLDWVKGLLKEK---------KLEQLVDSD-------- 526 (613)
Q Consensus 465 ~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~-------- 526 (613)
+.+..++.++|||||||++|||++|+.||......... .......+....... .........
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 99999999999999999999999999999643221110 111111111111100 000000000
Q ss_pred -----------cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 527 -----------MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 527 -----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
............+.+++.+||+.||++|||++|+++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 001234566788999999999999999999999987
No 215
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.7e-39 Score=345.20 Aligned_cols=196 Identities=20% Similarity=0.271 Sum_probs=170.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhc------ccCccceeeEEEEcCCc
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMA------VHRNLLRLRGFCMTPTE 359 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~~~~~ 359 (613)
..+|++.+.||+|+||+||+|.+. +++.||||+++... .....+..|+.++..+ +|+||+++++++.....
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 457899999999999999999876 58899999997532 2234677788888776 57799999999999999
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc--EEEeccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE--AVVGDFG 437 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~--~kl~DfG 437 (613)
.++||||+. ++|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++. +||+|||
T Consensus 174 ~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 174 ICMTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred EEEEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecc
Confidence 999999996 689998876543 2489999999999999999999999 9999999999999999987 9999999
Q ss_pred cceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcc
Q 007200 438 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 494 (613)
Q Consensus 438 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~ 494 (613)
+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 248 ~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~ 300 (429)
T 3kvw_A 248 SSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLP 300 (429)
T ss_dssp TCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCC
Confidence 99765422 233568999999999999999999999999999999999999996
No 216
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.6e-39 Score=335.61 Aligned_cols=259 Identities=22% Similarity=0.289 Sum_probs=183.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcC------C
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------T 358 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 358 (613)
.++|...+.||+|+||.||+|.+. +|+.||||++..... ......+.+|+.+++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 368999999999999999999975 688999999975432 23345788999999999999999999998754 5
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccc
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 438 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 438 (613)
..++++|++ +++|.+++... .+++..+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC---
T ss_pred eEEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccc
Confidence 679999999 78999988652 389999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc
Q 007200 439 AKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 517 (613)
Q Consensus 439 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
++..... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .......+.......
T Consensus 179 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~l~~i~~~~g~p 249 (367)
T 2fst_X 179 ARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD-----HIDQLKLILRLVGTP 249 (367)
T ss_dssp ----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCSC
T ss_pred ccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCC
Confidence 9865422 234568999999999887 678999999999999999999999995321 111112111111100
Q ss_pred c---ccc--------cccC--ccCCCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 518 K---LEQ--------LVDS--DMEGNYI----EEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 518 ~---~~~--------~~~~--~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
. +.. .... ....... ......+.+++.+||..||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0 000 0000 0000000 0123568899999999999999999999873
No 217
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=4.8e-39 Score=359.48 Aligned_cols=252 Identities=23% Similarity=0.326 Sum_probs=204.4
Q ss_pred HHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEecccc--CcccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCc
Q 007200 284 QVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEER--TQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTE 359 (613)
Q Consensus 284 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 359 (613)
....++|++.+.||+|+||+||+|++. +++.||||+++... .......+..|..++..+ +||||+++++++.+...
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~ 416 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 416 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSE
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCE
Confidence 345578999999999999999999976 68899999997542 122345677889998877 69999999999999999
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||||+++|+|.++++..+ .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 417 ~~lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla 489 (674)
T 3pfq_A 417 LYFVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMC 489 (674)
T ss_dssp EEEEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTC
T ss_pred EEEEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeeccee
Confidence 999999999999999998754 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 440 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 440 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.... ..+....+....
T Consensus 490 ~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~--------~~~~~~~i~~~~-- 558 (674)
T 3pfq_A 490 KENIWDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--------EDELFQSIMEHN-- 558 (674)
T ss_dssp EECCCTT-CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHSSC--
T ss_pred eccccCC-cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC--------HHHHHHHHHhCC--
Confidence 8643222 23445679999999999999999999999999999999999999996321 112222222111
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKM-----SEVVR 562 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~ 562 (613)
. .++......+.+++..||+.||++||++ +||++
T Consensus 559 -------~--~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 559 -------V--AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp -------C--CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred -------C--CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 0 1112234678999999999999999997 55554
No 218
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=320.55 Aligned_cols=251 Identities=20% Similarity=0.296 Sum_probs=198.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC---cccHHHHHHHHHHHhhcccCccceeeEEEE--cCCce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT---QGGELQFQTEVEMISMAVHRNLLRLRGFCM--TPTER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~ 360 (613)
.++|.+.+.||+|+||.||+|.+. +++.||+|+++.... ......+.+|+.+++.++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 368999999999999999999976 688999999975431 234567899999999999999999999985 44678
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
++||||+.++ |.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++.
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~ 157 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE--KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAE 157 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEEehhccCC-HHHHHHhCcc--cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccc
Confidence 9999999877 6676665432 3489999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCC-CceeeccccccccccccccccCC--CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc
Q 007200 441 LMDYKD-THVTTAVRGTIGHIAPEYLSTGK--SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 517 (613)
Q Consensus 441 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
...... ........|++.|+|||.+.+.. ++.++||||||+++|||++|+.||.... .......... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--------~~~~~~~i~~-~ 228 (305)
T 2wtk_C 158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN--------IYKLFENIGK-G 228 (305)
T ss_dssp ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS--------HHHHHHHHHH-C
T ss_pred ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch--------HHHHHHHHhc-C
Confidence 765322 22233455899999999987654 3779999999999999999999996321 1111111111 1
Q ss_pred cccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 518 KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. ... ......+.+++.+||+.||++|||+.|+++
T Consensus 229 ~~------~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 229 SY------AIP----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp CC------CCC----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CC------CCC----CccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 10 111 122357889999999999999999999997
No 219
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=6.5e-39 Score=334.69 Aligned_cols=256 Identities=20% Similarity=0.244 Sum_probs=191.3
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcCC------
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT------ 358 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 358 (613)
.++|.+.+.||+|+||.||+|.+. +++.||||++..... ......+.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 367899999999999999999976 688999999975432 233456889999999999999999999997654
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccc
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 438 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 438 (613)
..++||||+.+ +|.+.+.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 173 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGL 173 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC
T ss_pred ceEEEEEcCCC-CHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeec
Confidence 67999999975 78777752 288999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhc--
Q 007200 439 AKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-- 516 (613)
Q Consensus 439 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 516 (613)
++..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... .+.+......
T Consensus 174 a~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------~~~~~~i~~~~~ 243 (371)
T 2xrw_A 174 ARTAGTS--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH--------IDQWNKVIEQLG 243 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--------HHHHHHHHC-CC
T ss_pred ccccccc--cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH--------HHHHHHHHHHhC
Confidence 9865432 122345689999999999999999999999999999999999999963221 0111111100
Q ss_pred --------------------cc------ccccccCcc-CC--CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 517 --------------------KK------LEQLVDSDM-EG--NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 517 --------------------~~------~~~~~~~~~-~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. ......... +. .........+.+++.+||..||++|||++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 244 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp CCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 00 000000000 00 011233567899999999999999999999988
No 220
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.7e-39 Score=335.32 Aligned_cols=262 Identities=21% Similarity=0.289 Sum_probs=199.3
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcC-----Cce
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP-----TER 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 360 (613)
.++|.+.+.||+|+||.||+|.+. +|+.||||++...........+.+|+.+++.++||||+++++++..+ ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467889999999999999999976 68899999997655444456788999999999999999999988654 678
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
++||||+. ++|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 99999997 6899988763 389999999999999999999999 99999999999999999999999999998
Q ss_pred ecCCCCCc---------eeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007200 441 LMDYKDTH---------VTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 510 (613)
Q Consensus 441 ~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 510 (613)
........ ......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .......+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~ 235 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRD-----YRHQLLLI 235 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCC-----cHHHHHHH
Confidence 76532211 1123458999999998765 678999999999999999999999996322 11111111
Q ss_pred HHHhhccccc------------ccccC--ccCCCC----cHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 511 KGLLKEKKLE------------QLVDS--DMEGNY----IEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 511 ~~~~~~~~~~------------~~~~~--~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.......... +.... ...... .......+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 236 FGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1111100000 00000 000000 0122457889999999999999999999987
No 221
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.5e-39 Score=344.80 Aligned_cols=259 Identities=24% Similarity=0.348 Sum_probs=192.0
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcC------Cce
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP------TER 360 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 360 (613)
.+|...+.||+|+||+||+|++. +|+.||||++...... ..+|+++++.++||||+++++++... ...
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-----KNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchh-----HHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 35888899999999999999986 6899999998654322 34799999999999999999998542 235
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-CcEEEeccccc
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-FEAVVGDFGLA 439 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-~~~kl~DfGla 439 (613)
++||||+.+ ++.+.+.........+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||++
T Consensus 129 ~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 129 NLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred Eeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhh
Confidence 799999976 56665543222234599999999999999999999999 99999999999999965 57899999999
Q ss_pred eecCCCCCceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc-
Q 007200 440 KLMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK- 517 (613)
Q Consensus 440 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 517 (613)
+....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||..... ...+...+. .....
T Consensus 205 ~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~----~~~l~~i~~-~lg~p~ 277 (420)
T 1j1b_A 205 KQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG----VDQLVEIIK-VLGTPT 277 (420)
T ss_dssp EECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHH-HHCSCC
T ss_pred hhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHH-HhCCCC
Confidence 87643322 2345689999999999765 689999999999999999999999963210 011111111 11000
Q ss_pred ---------cccccccCccCCC-----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 518 ---------KLEQLVDSDMEGN-----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 518 ---------~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.......+..... +.......+.+++.+||..||++|||+.|+++
T Consensus 278 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 278 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0001101111000 01122467899999999999999999999986
No 222
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2e-40 Score=338.76 Aligned_cols=263 Identities=25% Similarity=0.408 Sum_probs=202.2
Q ss_pred HHHHHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEcCC
Q 007200 280 LRELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPT 358 (613)
Q Consensus 280 ~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 358 (613)
..++.+..++|.+.+.||+|+||.||+|.+.+ .+|+|+++..... .....+.+|+.+++.++||||+++++++.++.
T Consensus 25 ~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 102 (319)
T 2y4i_B 25 LQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP 102 (319)
T ss_dssp GGGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred cccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence 34455566889999999999999999999863 4999998754322 22345778999999999999999999999999
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccc
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 438 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 438 (613)
..+++|||+.+++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|||+
T Consensus 103 ~~~iv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~ 175 (319)
T 2y4i_B 103 HLAIITSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGL 175 (319)
T ss_dssp CEEEECBCCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSC
T ss_pred ceEEEeecccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCC
Confidence 9999999999999999997643 2489999999999999999999999 999999999999998 67999999999
Q ss_pred ceecCCCC----Cceeecccccccccccccccc---------CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcch
Q 007200 439 AKLMDYKD----THVTTAVRGTIGHIAPEYLST---------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVM 505 (613)
Q Consensus 439 a~~~~~~~----~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~ 505 (613)
++...... ........|++.|+|||.+.+ ..++.++||||||+++|||++|+.||....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-------- 247 (319)
T 2y4i_B 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP-------- 247 (319)
T ss_dssp CC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCC--------
T ss_pred ccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCC--------
Confidence 87553211 112223458999999999864 357889999999999999999999996321
Q ss_pred HHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcCC
Q 007200 506 LLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGDG 568 (613)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 568 (613)
........... ........ .....+.+++..||+.||++|||+.++++.|+...
T Consensus 248 ~~~~~~~~~~~-~~~~~~~~--------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 248 AEAIIWQMGTG-MKPNLSQI--------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp HHHHHHHHHTT-CCCCCCCS--------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred HHHHHHHhccC-CCCCCCcC--------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 11111111111 11111110 11245889999999999999999999999998753
No 223
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.4e-39 Score=326.31 Aligned_cols=252 Identities=23% Similarity=0.314 Sum_probs=203.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC--------cccHHHHHHHHHHHhhcc-cCccceeeEEEEc
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT--------QGGELQFQTEVEMISMAV-HRNLLRLRGFCMT 356 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~ 356 (613)
.++|.+.+.||+|+||.||+|.+. +|+.||||++..... ......+.+|+.++.++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467899999999999999999986 688999999865431 112346788999999996 9999999999999
Q ss_pred CCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecc
Q 007200 357 PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF 436 (613)
Q Consensus 357 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~Df 436 (613)
+...++||||+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 999999999999999999997653 389999999999999999999999 9999999999999999999999999
Q ss_pred ccceecCCCCCceeeccccccccccccccc------cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHH
Q 007200 437 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLS------TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 510 (613)
Q Consensus 437 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~ 510 (613)
|++....... ......|++.|+|||.+. ...++.++||||||+++|||++|+.||.... .....
T Consensus 169 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~ 238 (298)
T 1phk_A 169 GFSCQLDPGE--KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK--------QMLML 238 (298)
T ss_dssp TTCEECCTTC--CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHH
T ss_pred cchhhcCCCc--ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCcc--------HHHHH
Confidence 9998765332 223455899999999985 4567899999999999999999999995321 11111
Q ss_pred HHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 511 KGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
....... .. ............+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~-~~------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 239 RMIMSGN-YQ------FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHTC-CC------CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHhcCC-cc------cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 1111111 00 000111223467899999999999999999999986
No 224
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=3.3e-39 Score=328.89 Aligned_cols=255 Identities=22% Similarity=0.320 Sum_probs=197.6
Q ss_pred HHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccC-cccHHHHHHHHHHHhhcc--cCccceeeEEEEcCCc
Q 007200 283 LQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT-QGGELQFQTEVEMISMAV--HRNLLRLRGFCMTPTE 359 (613)
Q Consensus 283 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~ 359 (613)
+....++|.+.+.||+|+||.||++.+.+++.||||++..... ......+.+|+.++..+. |+||+++++++.++..
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 102 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 102 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSE
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCE
Confidence 3345578999999999999999999988899999999975432 233457899999999997 4999999999999999
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||| +.+++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||++++ +.+||+|||++
T Consensus 103 ~~lv~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~ 173 (313)
T 3cek_A 103 IYMVME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIA 173 (313)
T ss_dssp EEEEEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSS
T ss_pred EEEEEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecccc
Confidence 999999 66889999998653 489999999999999999999999 9999999999999975 79999999999
Q ss_pred eecCCCCCc-eeecccccccccccccccc-----------CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHH
Q 007200 440 KLMDYKDTH-VTTAVRGTIGHIAPEYLST-----------GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 507 (613)
Q Consensus 440 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~ 507 (613)
+........ ......|++.|+|||.+.+ ..++.++||||||+++|||++|+.||.... ...
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~ 246 (313)
T 3cek_A 174 NQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-------NQI 246 (313)
T ss_dssp CC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC-------SHH
T ss_pred ccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH-------HHH
Confidence 866433221 2234458999999999875 467889999999999999999999995221 111
Q ss_pred HHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 508 DWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
..+........ ....+......+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~---------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 247 SKLHAIIDPNH---------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp HHHHHHHCTTS---------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHhccc---------ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 11222221111 11111112357889999999999999999999987
No 225
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=7.1e-39 Score=333.08 Aligned_cols=269 Identities=21% Similarity=0.262 Sum_probs=189.4
Q ss_pred HHHHHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCc
Q 007200 281 RELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE 359 (613)
Q Consensus 281 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 359 (613)
.......++|.+.+.||+|+||+||+|.+. +|+.||||++...... ...+.+++..+..++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF--RNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC--CCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc--cHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 345667789999999999999999999986 6899999998654322 2345678888889999999999999875433
Q ss_pred -------eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCceeecC-CC
Q 007200 360 -------RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH--DHCDPKIIHRDVKAANILLDE-EF 429 (613)
Q Consensus 360 -------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH--~~~~~~ivH~Dlk~~NIll~~-~~ 429 (613)
.++||||+.+ +|...+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 7899999986 454444432223345899999999999999999999 88 9999999999999997 89
Q ss_pred cEEEeccccceecCCCCCceeeccccccccccccccccCC-CCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHH
Q 007200 430 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 508 (613)
Q Consensus 430 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~ 508 (613)
.+||+|||+++...... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.... ......
T Consensus 170 ~~kl~Dfg~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~-----~~~~~~ 242 (360)
T 3e3p_A 170 TLKLCDFGSAKKLSPSE--PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDN-----SAGQLH 242 (360)
T ss_dssp EEEECCCTTCBCCCTTS--CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH
T ss_pred cEEEeeCCCceecCCCC--CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCC-----hHHHHH
Confidence 99999999998765332 223455899999999987654 8999999999999999999999996321 111111
Q ss_pred HHHHHhhcc------------cccccccCc------cCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 509 WVKGLLKEK------------KLEQLVDSD------MEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 509 ~~~~~~~~~------------~~~~~~~~~------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.+....... ......+.. ............+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 243 EIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 111110000 000000000 000111123567999999999999999999999987
No 226
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.5e-38 Score=327.34 Aligned_cols=259 Identities=21% Similarity=0.277 Sum_probs=202.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEe-C-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCc------cceeeEEEEcCC
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRL-T-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN------LLRLRGFCMTPT 358 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~ 358 (613)
.++|.+.+.||+|+||+||+|.+ . +++.||||+++... .....+.+|+.++..++|++ ++++++++....
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 46899999999999999999987 3 68899999996432 23456888999999887765 999999999999
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-----------
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE----------- 427 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~----------- 427 (613)
..++||||+ +++|.+++..... .++++..+..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC---
T ss_pred cEEEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcc
Confidence 999999999 8899999976543 2489999999999999999999999 9999999999999987
Q ss_pred --------CCcEEEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCccccccc
Q 007200 428 --------EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 499 (613)
Q Consensus 428 --------~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~ 499 (613)
++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-- 238 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD-- 238 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC--
T ss_pred ccccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC--
Confidence 668999999999865432 233568999999999999999999999999999999999999996321
Q ss_pred CCCcchHHHHHHHHhhcccc--------cccc-cCcc---------------------CCCCcHHHHHHHHHHHHHccCC
Q 007200 500 NDDDVMLLDWVKGLLKEKKL--------EQLV-DSDM---------------------EGNYIEEEVEQLIQVALLCTQG 549 (613)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~---------------------~~~~~~~~~~~l~~li~~cl~~ 549 (613)
.......+......... .... .... ...........+.+++.+||+.
T Consensus 239 ---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 315 (339)
T 1z57_A 239 ---SKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEY 315 (339)
T ss_dssp ---HHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred ---hHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCc
Confidence 11111111111110000 0000 0000 0011234567899999999999
Q ss_pred CCCCCCCHHHHHH
Q 007200 550 SPMERPKMSEVVR 562 (613)
Q Consensus 550 dP~~RPt~~evl~ 562 (613)
||++|||+.|+++
T Consensus 316 dP~~Rpt~~ell~ 328 (339)
T 1z57_A 316 DPAKRITLREALK 328 (339)
T ss_dssp STTTSCCHHHHTT
T ss_pred CcccccCHHHHhc
Confidence 9999999999986
No 227
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.6e-39 Score=339.10 Aligned_cols=260 Identities=20% Similarity=0.294 Sum_probs=192.3
Q ss_pred hCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCc------eE
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE------RL 361 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------~~ 361 (613)
.+|...+.||+|+||+||+|++..+..+|+|++...... ..+|+++++.++||||+++++++..... .+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 568889999999999999999987777999988654322 2369999999999999999999865433 78
Q ss_pred EEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec-CCCcEEEeccccce
Q 007200 362 LVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAVVGDFGLAK 440 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~kl~DfGla~ 440 (613)
+||||+.++.+..... .......+++..++.++.||++||+|||++ +|+||||||+|||++ .++.+||+|||+++
T Consensus 115 lv~e~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 115 LVLEYVPETVYRASRH-YAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEECCSEEHHHHHHH-HHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEeeccCccHHHHHHH-HHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 9999998754443332 111223589999999999999999999999 999999999999999 78999999999998
Q ss_pred ecCCCCCceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccc-
Q 007200 441 LMDYKDTHVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK- 518 (613)
Q Consensus 441 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 518 (613)
....... .....||+.|+|||.+.+. .++.++|||||||++|||++|+.||.... .......+........
T Consensus 191 ~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~-----~~~~l~~i~~~~g~p~~ 263 (394)
T 4e7w_A 191 ILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES-----GIDQLVEIIKVLGTPSR 263 (394)
T ss_dssp ECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHHHCCCCH
T ss_pred cccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHHHhCCCCH
Confidence 7643322 2345689999999998765 58999999999999999999999996321 1111111111110000
Q ss_pred ---------ccccccCccCCC-----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 519 ---------LEQLVDSDMEGN-----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 519 ---------~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
.....-+..... ........+.+++.+||+.||++|||+.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred HHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 000000000000 011134578999999999999999999999873
No 228
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6e-39 Score=339.05 Aligned_cols=268 Identities=20% Similarity=0.289 Sum_probs=182.9
Q ss_pred hCCCC-CCccccCcCcEEEEEEeC---CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEc--CCceE
Q 007200 288 DNFSN-RNILGRGGFGKVYKGRLT---DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT--PTERL 361 (613)
Q Consensus 288 ~~~~~-~~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 361 (613)
+.|++ .++||+|+||+||+|++. +++.||||++..... ...+.+|+.+++.++||||+++++++.. +...+
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC---CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC---CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 34555 457999999999999965 578899999975432 2467899999999999999999999954 67889
Q ss_pred EEEecccCCcchhhhhccC-----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----cCCCcEE
Q 007200 362 LVYPFMVNGSVASCLRERG-----QSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL----DEEFEAV 432 (613)
Q Consensus 362 lv~e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll----~~~~~~k 432 (613)
+||||+. |+|.+++.... .....+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+|
T Consensus 97 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~k 172 (405)
T 3rgf_A 97 LLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVK 172 (405)
T ss_dssp EEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred EEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEE
Confidence 9999996 47877775321 1222489999999999999999999999 99999999999999 6778999
Q ss_pred EeccccceecCCCCC--ceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCCCcccccccC----CCcch
Q 007200 433 VGDFGLAKLMDYKDT--HVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARLAN----DDDVM 505 (613)
Q Consensus 433 l~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~p~~~~~~~~----~~~~~ 505 (613)
|+|||+++....... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||....... .....
T Consensus 173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 252 (405)
T 3rgf_A 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 252 (405)
T ss_dssp ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHH
T ss_pred EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHH
Confidence 999999987653221 223345689999999999874 58999999999999999999999996332110 00111
Q ss_pred HHHHHHHHhhcc---cccccc-------------cCccCCCCcH--------HHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 007200 506 LLDWVKGLLKEK---KLEQLV-------------DSDMEGNYIE--------EEVEQLIQVALLCTQGSPMERPKMSEVV 561 (613)
Q Consensus 506 ~~~~~~~~~~~~---~~~~~~-------------~~~~~~~~~~--------~~~~~l~~li~~cl~~dP~~RPt~~evl 561 (613)
....+....... .+..+. .......... .....+.+++.+||+.||++|||++|++
T Consensus 253 ~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L 332 (405)
T 3rgf_A 253 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAM 332 (405)
T ss_dssp HHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 111111111100 000000 0000000000 0134678999999999999999999998
Q ss_pred H
Q 007200 562 R 562 (613)
Q Consensus 562 ~ 562 (613)
+
T Consensus 333 ~ 333 (405)
T 3rgf_A 333 Q 333 (405)
T ss_dssp T
T ss_pred c
Confidence 7
No 229
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2e-38 Score=330.99 Aligned_cols=257 Identities=19% Similarity=0.266 Sum_probs=194.5
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEcCCce----
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTER---- 360 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~---- 360 (613)
.++|...+.||+|+||+||+|.+. +|+.||||++...... .....+.+|+.+++.++||||+++++++......
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 367888999999999999999976 6899999999765432 2345788999999999999999999999877654
Q ss_pred --EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEecccc
Q 007200 361 --LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGL 438 (613)
Q Consensus 361 --~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGl 438 (613)
++||||+. ++|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred eEEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 588777632 289999999999999999999999 999999999999999999999999999
Q ss_pred ceecCCCCCceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc
Q 007200 439 AKLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 517 (613)
Q Consensus 439 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
++..... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.... .......+.......
T Consensus 191 a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~~~ 261 (371)
T 4exu_A 191 ARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD-----YLDQLTQILKVTGVP 261 (371)
T ss_dssp C------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHHCCC
T ss_pred ccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHHHhCCC
Confidence 9855422 234568999999999987 678999999999999999999999996321 111111111100000
Q ss_pred c---ccc--------c---ccCccCCC---CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 518 K---LEQ--------L---VDSDMEGN---YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 518 ~---~~~--------~---~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. ... . ........ ........+.+++.+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 262 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp CHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 000 0 00000000 00112467899999999999999999999987
No 230
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.1e-38 Score=331.22 Aligned_cols=265 Identities=20% Similarity=0.277 Sum_probs=199.3
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcc-----------cCccceeeEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-----------HRNLLRLRGFC 354 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~ 354 (613)
.++|.+.+.||+|+||+||+|.+. +++.||||++.... .....+.+|+.++.++. |+||+++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~ 95 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF 95 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHh
Confidence 367999999999999999999975 78899999997432 23456788999988876 89999999998
Q ss_pred EcCC----ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec----
Q 007200 355 MTPT----ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD---- 426 (613)
Q Consensus 355 ~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~---- 426 (613)
.... ..+++|||+ +++|.+++..... ..+++..+..++.||+.||+|||+++ +|+||||||+|||++
T Consensus 96 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 96 NHKGPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEET
T ss_pred hccCCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCC
Confidence 7643 679999999 8999999976433 23899999999999999999999953 899999999999994
Q ss_pred --CCCcEEEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCC-Cc
Q 007200 427 --EEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAND-DD 503 (613)
Q Consensus 427 --~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~-~~ 503 (613)
..+.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ..
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~ 246 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CH
T ss_pred CcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCCh
Confidence 4458999999999876432 2234589999999999999999999999999999999999999974321110 01
Q ss_pred chHHHHHHHHhhcc------------------c-ccccccC---------ccCCCCcHHHHHHHHHHHHHccCCCCCCCC
Q 007200 504 VMLLDWVKGLLKEK------------------K-LEQLVDS---------DMEGNYIEEEVEQLIQVALLCTQGSPMERP 555 (613)
Q Consensus 504 ~~~~~~~~~~~~~~------------------~-~~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 555 (613)
......+....... . ...+... .............+.+++.+||+.||++||
T Consensus 247 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 247 DDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 11111111111000 0 0000000 001123456778899999999999999999
Q ss_pred CHHHHHH
Q 007200 556 KMSEVVR 562 (613)
Q Consensus 556 t~~evl~ 562 (613)
|++|+++
T Consensus 327 t~~ell~ 333 (373)
T 1q8y_A 327 DAGGLVN 333 (373)
T ss_dssp CHHHHHT
T ss_pred CHHHHhh
Confidence 9999987
No 231
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=8.6e-39 Score=327.67 Aligned_cols=264 Identities=25% Similarity=0.389 Sum_probs=199.7
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeC--CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhc---ccCccceeeEEEE----
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLT--DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMA---VHRNLLRLRGFCM---- 355 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l---~h~niv~l~~~~~---- 355 (613)
..++|.+.+.||+|+||.||+|.+. +|+.||+|+++..... .....+.+|+.+++.+ .||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 3478999999999999999999973 6789999998754322 1123456777777666 8999999999987
Q ss_pred -cCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEe
Q 007200 356 -TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 434 (613)
Q Consensus 356 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~ 434 (613)
.....++||||+. |+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999997 699999876543 2489999999999999999999999 99999999999999999999999
Q ss_pred ccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHh
Q 007200 435 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 514 (613)
Q Consensus 435 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 514 (613)
|||+++...... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||.... .......+....
T Consensus 163 Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~ 235 (326)
T 1blx_A 163 DFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS-----DVDQLGKILDVI 235 (326)
T ss_dssp SCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHHH
T ss_pred cCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHHHc
Confidence 999998654322 2234558999999999999999999999999999999999999996322 111111111111
Q ss_pred hcc---cccc-------cccC---ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 515 KEK---KLEQ-------LVDS---DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 515 ~~~---~~~~-------~~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... .... .... .............+.+++.+||+.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 100 0000 0000 0000111223467889999999999999999999986
No 232
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.2e-39 Score=325.40 Aligned_cols=252 Identities=23% Similarity=0.376 Sum_probs=192.8
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEc---------
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT--------- 356 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------- 356 (613)
.++|++.+.||+|+||.||+|+.. +|+.||||++... ......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 467889999999999999999976 7899999998643 2234578899999999999999999998865
Q ss_pred ----CCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEE
Q 007200 357 ----PTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 432 (613)
Q Consensus 357 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~k 432 (613)
....++||||+++|+|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 356789999999999999997643 2378899999999999999999999 999999999999999999999
Q ss_pred EeccccceecCCCC-------------CceeeccccccccccccccccC-CCCCcccchhHHHHHHHHHhCCCCcccccc
Q 007200 433 VGDFGLAKLMDYKD-------------THVTTAVRGTIGHIAPEYLSTG-KSSEKTDVFGYGVMLLELITGQRAFDLARL 498 (613)
Q Consensus 433 l~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~G~il~elltg~~p~~~~~~ 498 (613)
|+|||+++...... ........|++.|+|||.+.+. .++.++|||||||++|||++ ||....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~- 232 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM- 232 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-
Confidence 99999997654221 1122344589999999999765 68999999999999999998 553111
Q ss_pred cCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 499 ANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
........... . ....+..........+.+++..||+.||++|||+.++++.
T Consensus 233 ------~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 233 ------ERVNILKKLRS-V------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp ------HHHHHHHHHHS-T------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ------hHHHHHHhccc-c------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 01111111111 0 0111112223334568899999999999999999999983
No 233
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5e-38 Score=329.39 Aligned_cols=200 Identities=24% Similarity=0.322 Sum_probs=169.3
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcc-cC-----ccceeeEEEEcC
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HR-----NLLRLRGFCMTP 357 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~~~ 357 (613)
...++|.+.+.||+|+||+||+|.+. +++.||||+++... .....+..|+.++..+. |+ +|+++++++...
T Consensus 51 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 51 KWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred EeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 34578999999999999999999976 68899999997432 22446777888888775 44 499999999999
Q ss_pred CceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec--CCCcEEEec
Q 007200 358 TERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD--EEFEAVVGD 435 (613)
Q Consensus 358 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~--~~~~~kl~D 435 (613)
...++||||+. |+|.+++..... ..+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+||+|
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred CceEEEEecCC-CCHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 99999999996 599999976542 2489999999999999999999952 12899999999999995 477899999
Q ss_pred cccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcc
Q 007200 436 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 494 (613)
Q Consensus 436 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~ 494 (613)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 205 FG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 205 FGSSCQLGQR----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp CTTCEETTCC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ccCceecccc----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 9999876432 233568999999999999999999999999999999999999996
No 234
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.1e-38 Score=326.51 Aligned_cols=255 Identities=20% Similarity=0.275 Sum_probs=194.7
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc-ccHHHHHHHHHHHhhcccCccceeeEEEEcCCc------
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE------ 359 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------ 359 (613)
++|...+.||+|+||.||+|.+. +|+.||||++...... .....+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 57888999999999999999976 6899999999765432 234568899999999999999999999987654
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||||+. ++|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 104 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred EEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccc
Confidence 499999997 588887743 389999999999999999999999 9999999999999999999999999999
Q ss_pred eecCCCCCceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc-
Q 007200 440 KLMDYKDTHVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK- 517 (613)
Q Consensus 440 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~- 517 (613)
+..... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||..... ......+.......
T Consensus 174 ~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~~~~~ 244 (353)
T 3coi_A 174 RHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY-----LDQLTQILKVTGVPG 244 (353)
T ss_dssp TC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCH-----HHHHHHHHHHHCBCC
T ss_pred cCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHHHhCCCC
Confidence 764422 233468999999999877 6789999999999999999999999963221 11111111110000
Q ss_pred --ccc------------cc---ccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 518 --KLE------------QL---VDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 518 --~~~------------~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
... .+ ..... ..........+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 245 TEFVQKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHTTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 00 00000 0111233467899999999999999999999987
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=5.5e-38 Score=315.77 Aligned_cols=253 Identities=23% Similarity=0.302 Sum_probs=202.7
Q ss_pred HHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEE
Q 007200 285 VATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLL 362 (613)
Q Consensus 285 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 362 (613)
...++|.+.+.||+|+||.||+|... +++.||+|++..... ......+.+|++++++++||||+++++++.+....++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 34578999999999999999999986 789999999875432 3346678999999999999999999999999999999
Q ss_pred EEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC---CcEEEeccccc
Q 007200 363 VYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE---FEAVVGDFGLA 439 (613)
Q Consensus 363 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~---~~~kl~DfGla 439 (613)
||||+.+++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.+ +.+||+|||++
T Consensus 99 v~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 999999999999887653 389999999999999999999999 99999999999999764 47999999999
Q ss_pred eecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 440 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 440 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
........ .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||.... ..+...........
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~--------~~~~~~~~~~~~~~ 240 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKN--------EYDILKRVETGKYA 240 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS--------HHHHHHHHHHCCCC
T ss_pred eeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCC--------HHHHHHHHHcCCCC
Confidence 76543221 223348899999999865 48899999999999999999999996321 11112221111110
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. .. ........+.+++.+||+.||++|||+.|+++
T Consensus 241 ~~---~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 241 FD---LP----QWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CC---SG----GGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CC---ch----hhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 00 00122357899999999999999999999998
No 236
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.9e-39 Score=329.17 Aligned_cols=258 Identities=22% Similarity=0.340 Sum_probs=180.1
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHH-HHhhcccCccceeeEEEEcCCceEEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVE-MISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
.++|...+.||+|+||.||+|... +|+.||||+++..........+..|+. +++.++||||+++++++..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 467889999999999999999986 789999999976654444455666666 677789999999999999999999999
Q ss_pred ecccCCcchhhhhcc-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 365 PFMVNGSVASCLRER-GQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 365 e~~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
||+.+ +|.+++... ......+++..+..++.|++.||.|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 99985 777776531 111235899999999999999999999953 79999999999999999999999999997654
Q ss_pred CCCCceeecccccccccccccc----ccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYL----STGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
... ......||+.|+|||.+ .+..++.++||||||+++|||++|+.||...... .+.+.....
T Consensus 178 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-------~~~~~~~~~---- 244 (327)
T 3aln_A 178 DSI--AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV-------FDQLTQVVK---- 244 (327)
T ss_dssp ------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------CCCCC----
T ss_pred ccc--ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchH-------HHHHHHHhc----
Confidence 322 12233589999999998 4567899999999999999999999999632110 000000000
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
-..+.............+.+++.+||+.||++|||+.++++
T Consensus 245 --~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 245 --GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --SCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 00011111111123457899999999999999999999976
No 237
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.5e-38 Score=338.75 Aligned_cols=252 Identities=23% Similarity=0.300 Sum_probs=186.8
Q ss_pred CCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceEEEEecc
Q 007200 289 NFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYPFM 367 (613)
Q Consensus 289 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 367 (613)
.|...+.||+|+||+||.+...+|+.||||++.... ...+.+|+.++..+ +||||+++++++.++...++||||+
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~ 91 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF----CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELC 91 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG----HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCC
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecC
Confidence 344567899999999987766689999999986532 34577899999876 8999999999999999999999999
Q ss_pred cCCcchhhhhccCCCCCC---CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCC-------------CcE
Q 007200 368 VNGSVASCLRERGQSQPP---LNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEE-------------FEA 431 (613)
Q Consensus 368 ~~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~-------------~~~ 431 (613)
. |+|.+++......... ..+..+..++.||+.||+|||++ +|+||||||+|||++.+ +.+
T Consensus 92 ~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~ 167 (434)
T 2rio_A 92 N-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRI 167 (434)
T ss_dssp S-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEE
T ss_pred C-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEE
Confidence 5 6999999765432211 13345678999999999999999 99999999999999754 489
Q ss_pred EEeccccceecCCCCCc---eeecccccccccccccccc-------CCCCCcccchhHHHHHHHHHh-CCCCcccccccC
Q 007200 432 VVGDFGLAKLMDYKDTH---VTTAVRGTIGHIAPEYLST-------GKSSEKTDVFGYGVMLLELIT-GQRAFDLARLAN 500 (613)
Q Consensus 432 kl~DfGla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~ 500 (613)
||+|||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||....
T Consensus 168 kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~--- 244 (434)
T 2rio_A 168 LISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY--- 244 (434)
T ss_dssp EECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT---
T ss_pred EEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch---
Confidence 99999999877543222 1234569999999999976 568999999999999999999 999995221
Q ss_pred CCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 501 DDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
......+..... .+.............+.+++.+||+.||++|||+.++++
T Consensus 245 ---~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 245 ---SRESNIIRGIFS--------LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp ---THHHHHHHTCCC--------CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---hhHHHHhcCCCC--------cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 011111111100 011111223456678999999999999999999999986
No 238
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.6e-39 Score=327.77 Aligned_cols=245 Identities=22% Similarity=0.382 Sum_probs=199.4
Q ss_pred HHHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc-----cHHHHHHHHHHHhhcc--cCccceeeEEE
Q 007200 283 LQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-----GELQFQTEVEMISMAV--HRNLLRLRGFC 354 (613)
Q Consensus 283 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l~--h~niv~l~~~~ 354 (613)
.....++|.+.+.||+|+||.||+|.+. +++.||||++....... ....+..|+.+++.+. |+||+++++++
T Consensus 38 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 38 KEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp --CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE
Confidence 3445678999999999999999999975 68899999997653221 1234667999999996 59999999999
Q ss_pred EcCCceEEEEecccC-CcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec-CCCcEE
Q 007200 355 MTPTERLLVYPFMVN-GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD-EEFEAV 432 (613)
Q Consensus 355 ~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~~k 432 (613)
..+...++|+|++.+ ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+|
T Consensus 118 ~~~~~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~k 190 (320)
T 3a99_A 118 ERPDSFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELK 190 (320)
T ss_dssp ECSSEEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEE
T ss_pred ecCCcEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEE
Confidence 999999999999976 89999997653 389999999999999999999999 999999999999999 788999
Q ss_pred EeccccceecCCCCCceeeccccccccccccccccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHH
Q 007200 433 VGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVK 511 (613)
Q Consensus 433 l~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 511 (613)
|+|||+++...... .....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||....
T Consensus 191 L~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------------- 253 (320)
T 3a99_A 191 LIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------------- 253 (320)
T ss_dssp ECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------------
T ss_pred EeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh--------------
Confidence 99999998765322 233458999999999987775 688999999999999999999996321
Q ss_pred HHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 512 GLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
....... .. .. .....+.+++.+||+.||++|||+.|+++
T Consensus 254 ~~~~~~~---~~----~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 254 EIIRGQV---FF----RQ----RVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HHHHCCC---CC----SS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhcccc---cc----cc----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111100 00 11 12356889999999999999999999987
No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.6e-38 Score=327.12 Aligned_cols=252 Identities=23% Similarity=0.257 Sum_probs=173.2
Q ss_pred hhCCCCCC-ccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEc----CCce
Q 007200 287 TDNFSNRN-ILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT----PTER 360 (613)
Q Consensus 287 ~~~~~~~~-~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 360 (613)
.++|.+.+ .||+|+||+||+|.+. +|+.||||++.... .........+..+.||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 46788854 6999999999999987 69999999986431 122223334567789999999999876 4457
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC---CCcEEEeccc
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFG 437 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~DfG 437 (613)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 999999999999999986542 3599999999999999999999999 9999999999999986 4559999999
Q ss_pred cceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc
Q 007200 438 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 517 (613)
Q Consensus 438 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
+++..... ......||+.|+|||.+.+..++.++||||||+++|+|++|+.||........ ...........
T Consensus 177 ~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-----~~~~~~~~~~~ 248 (336)
T 3fhr_A 177 FAKETTQN---ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI-----SPGMKRRIRLG 248 (336)
T ss_dssp TCEEC-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred cceecccc---ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh-----hhhHHHhhhcc
Confidence 99865432 22334589999999999888899999999999999999999999963321100 00000000000
Q ss_pred cccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 518 KLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
. ..............+.+++..||+.||++|||+.|+++
T Consensus 249 ---~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 249 ---Q---YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp --------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ---c---cccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 00011111223467889999999999999999999998
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=325.07 Aligned_cols=247 Identities=23% Similarity=0.393 Sum_probs=191.8
Q ss_pred HHHHHhhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc-----cHHHHHHHHHHHhhc----ccCccceee
Q 007200 282 ELQVATDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG-----GELQFQTEVEMISMA----VHRNLLRLR 351 (613)
Q Consensus 282 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~e~~~l~~l----~h~niv~l~ 351 (613)
+.....++|.+.+.||+|+||.||+|.+. +++.||||++....... ....+.+|+.++.++ +|+||++++
T Consensus 25 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~ 104 (312)
T 2iwi_A 25 DREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLL 104 (312)
T ss_dssp --------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEE
T ss_pred chhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEE
Confidence 34455678999999999999999999875 68899999997543221 122356789998888 899999999
Q ss_pred EEEEcCCceEEEEec-ccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec-CCC
Q 007200 352 GFCMTPTERLLVYPF-MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD-EEF 429 (613)
Q Consensus 352 ~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~ 429 (613)
+++...+..++|+|| +.+++|.+++.... ++++..+..++.|++.||+|||++ +|+||||||+||+++ .++
T Consensus 105 ~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 177 (312)
T 2iwi_A 105 DWFETQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRG 177 (312)
T ss_dssp EEC-----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTT
T ss_pred EEEecCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCC
Confidence 999999999999999 78999999998754 389999999999999999999999 999999999999999 889
Q ss_pred cEEEeccccceecCCCCCceeeccccccccccccccccCCC-CCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHH
Q 007200 430 EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKS-SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLD 508 (613)
Q Consensus 430 ~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~ 508 (613)
.+||+|||+++...... .....|+..|+|||.+.+..+ +.++||||||+++|||++|+.||.... .
T Consensus 178 ~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----------~ 244 (312)
T 2iwi_A 178 CAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ----------E 244 (312)
T ss_dssp EEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------H
T ss_pred eEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH----------H
Confidence 99999999998765432 234558999999999987766 458999999999999999999996221 0
Q ss_pred HHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 007200 509 WVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRM 563 (613)
Q Consensus 509 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 563 (613)
.... .. . ........+.+++.+||+.||++|||+.|+++.
T Consensus 245 ----~~~~-~~------~----~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 245 ----ILEA-EL------H----FPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp ----HHHT-CC------C----CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----Hhhh-cc------C----CcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 00 0 111223568899999999999999999999873
No 241
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=321.38 Aligned_cols=258 Identities=22% Similarity=0.343 Sum_probs=190.4
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEE----------
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM---------- 355 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~---------- 355 (613)
.++|.+.+.||+|+||.||+|.+. +|+.||+|++.... ......+.+|+++++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 367889999999999999999987 58999999986542 334567889999999999999999999874
Q ss_pred ----cCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeec-CCCc
Q 007200 356 ----TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLD-EEFE 430 (613)
Q Consensus 356 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~-~~~~ 430 (613)
+....++||||+. |+|.++++.. ++++..+..++.|++.||+|||++ +|+||||||+||+++ +++.
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~ 159 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLV 159 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCe
Confidence 3467799999997 6999988642 389999999999999999999999 999999999999997 5679
Q ss_pred EEEeccccceecCCCCC--ceeecccccccccccccccc-CCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHH
Q 007200 431 AVVGDFGLAKLMDYKDT--HVTTAVRGTIGHIAPEYLST-GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 507 (613)
Q Consensus 431 ~kl~DfGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~ 507 (613)
+||+|||+++....... .......++..|+|||.+.+ ..++.++||||||+++|||++|+.||.... . .
T Consensus 160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-----~---~ 231 (320)
T 2i6l_A 160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH-----E---L 231 (320)
T ss_dssp EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----H---H
T ss_pred EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCC-----H---H
Confidence 99999999986643211 12233457899999998865 678999999999999999999999996322 1 1
Q ss_pred HHHHHHhhcccc------cc-------cccCccC--CC----CcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 508 DWVKGLLKEKKL------EQ-------LVDSDME--GN----YIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 508 ~~~~~~~~~~~~------~~-------~~~~~~~--~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
+........... .+ ....... .. ........+.+++.+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 232 EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 111111110000 00 0000000 00 00112467899999999999999999999987
No 242
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.1e-37 Score=323.31 Aligned_cols=259 Identities=19% Similarity=0.244 Sum_probs=199.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CC-CEEEEEEeccccCcccHHHHHHHHHHHhhcccCc------cceeeEEEEcCC
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DG-SLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN------LLRLRGFCMTPT 358 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~~~ 358 (613)
.++|.+.+.||+|+||+||+|.+. ++ +.||+|+++... .....+.+|+.+++.+.|++ ++.+++++....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 478999999999999999999975 44 689999997432 23456888999999998766 899999999999
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee-------------
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILL------------- 425 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll------------- 425 (613)
..++||||+ ++++.+++..... .++++..+..++.||+.||+|||++ +|+||||||+|||+
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred eEEEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 999999999 6677777765432 2489999999999999999999999 99999999999999
Q ss_pred ------cCCCcEEEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCccccccc
Q 007200 426 ------DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLA 499 (613)
Q Consensus 426 ------~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~ 499 (613)
+.++.+||+|||+++..... .....||+.|+|||.+.+..++.++|||||||++|||++|+.||....
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-- 243 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEH----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHE-- 243 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSC----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS--
T ss_pred cccccccCCCcEEEeecCcccccccc----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCC--
Confidence 56789999999999865432 233568999999999999999999999999999999999999996321
Q ss_pred CCCcchHHHHHHHHhhcccc---------cccccCcc---------------------CCCCcHHHHHHHHHHHHHccCC
Q 007200 500 NDDDVMLLDWVKGLLKEKKL---------EQLVDSDM---------------------EGNYIEEEVEQLIQVALLCTQG 549 (613)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~---------------------~~~~~~~~~~~l~~li~~cl~~ 549 (613)
.......+......... ........ ...........+.+++.+||+.
T Consensus 244 ---~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 320 (355)
T 2eu9_A 244 ---NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEF 320 (355)
T ss_dssp ---HHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCS
T ss_pred ---HHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcC
Confidence 11111111111110000 00000000 0011223456789999999999
Q ss_pred CCCCCCCHHHHHH
Q 007200 550 SPMERPKMSEVVR 562 (613)
Q Consensus 550 dP~~RPt~~evl~ 562 (613)
||++|||+.|+++
T Consensus 321 dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 321 DPAQRITLAEALL 333 (355)
T ss_dssp STTTSCCHHHHTT
T ss_pred ChhhCcCHHHHhc
Confidence 9999999999986
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=317.57 Aligned_cols=252 Identities=22% Similarity=0.359 Sum_probs=180.2
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHH-HHHHHHHHhhcccCccceeeEEEEcCCceEEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQ-FQTEVEMISMAVHRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 364 (613)
.++|+..+.||+|+||.||+|.+. +|+.||||++..........+ +..+..+++.++||||+++++++.++...++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888999999999999999986 789999999976554433333 344455678889999999999999999999999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
||+ ++.+..+..... ..+++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+|||++....
T Consensus 104 e~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 176 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLV 176 (318)
T ss_dssp CCC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred ecc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhcc
Confidence 999 555555444322 248999999999999999999998 6 89999999999999999999999999997654
Q ss_pred CCCCceeeccccccccccccccc-----cCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLS-----TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK 518 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (613)
... ......|++.|+|||.+. ...++.++||||||+++|||++|+.||.... . ....+........
T Consensus 177 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~---~~~~~~~~~~~~~ 247 (318)
T 2dyl_A 177 DDK--AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK----T---DFEVLTKVLQEEP 247 (318)
T ss_dssp ------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCC----S---HHHHHHHHHHSCC
T ss_pred CCc--cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCC----c---cHHHHHHHhccCC
Confidence 322 223345899999999984 4568899999999999999999999996311 1 1122222222111
Q ss_pred ccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 519 LEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.. ... .......+.+++.+||+.||++|||+.++++
T Consensus 248 ~~------~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 PL------LPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp CC------CCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CC------CCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 10 000 0112356889999999999999999999986
No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.4e-38 Score=346.84 Aligned_cols=261 Identities=23% Similarity=0.293 Sum_probs=199.8
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEc------CCc
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMT------PTE 359 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~~ 359 (613)
.++|.+.+.||+|+||.||+|.+. +|+.||||+++..........+.+|+++++.++||||+++++++.. ...
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 368999999999999999999975 6899999999776555556679999999999999999999998765 667
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCc---EEEecc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFE---AVVGDF 436 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~---~kl~Df 436 (613)
.++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred EEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 7999999999999999986543 23488999999999999999999999 9999999999999997765 999999
Q ss_pred ccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhc
Q 007200 437 GLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE 516 (613)
Q Consensus 437 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 516 (613)
|++....... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ....|.......
T Consensus 169 G~a~~~~~~~--~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~-------~~~~~~~~i~~~ 239 (676)
T 3qa8_A 169 GYAKELDQGE--LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW-------QPVQWHGKVREK 239 (676)
T ss_dssp CCCCBTTSCC--CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC-------HHHHSSTTCC--
T ss_pred cccccccccc--ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc-------chhhhhhhhhcc
Confidence 9998765332 2234569999999999999999999999999999999999999995321 011111000000
Q ss_pred ccc----ccccc------C--ccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 007200 517 KKL----EQLVD------S--DMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEV 560 (613)
Q Consensus 517 ~~~----~~~~~------~--~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ev 560 (613)
... ..... . .............+.+++..||..||++|||+.|+
T Consensus 240 ~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 240 SNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp ----CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred cchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000 00000 0 01112334466789999999999999999999774
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=330.29 Aligned_cols=249 Identities=24% Similarity=0.326 Sum_probs=186.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceEEEEe
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 365 (613)
..+|...+.||+|+||+||.....+|+.||||++...... .+.+|+.+++.+ +||||+++++++.+....++|||
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~----~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS----FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE----ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH----HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 3468888999999999976555567999999999654332 245899999998 79999999999999999999999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC-----CCcEEEeccccce
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE-----EFEAVVGDFGLAK 440 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~-----~~~~kl~DfGla~ 440 (613)
|+. |+|.+++...... +.+..+..++.||+.||+|||++ +|+||||||+|||++. ...+||+|||+++
T Consensus 99 ~~~-g~L~~~l~~~~~~---~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDFA---HLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp CCS-EEHHHHHHSSSCC---CCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred CCC-CCHHHHHHhcCCC---ccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 996 6999999765432 44456678999999999999999 9999999999999953 2358899999998
Q ss_pred ecCCCCC--ceeeccccccccccccccc---cCCCCCcccchhHHHHHHHHHh-CCCCcccccccCCCcchHHHHHHHHh
Q 007200 441 LMDYKDT--HVTTAVRGTIGHIAPEYLS---TGKSSEKTDVFGYGVMLLELIT-GQRAFDLARLANDDDVMLLDWVKGLL 514 (613)
Q Consensus 441 ~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwS~G~il~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 514 (613)
....... .......||+.|+|||++. ...++.++|||||||++|||++ |+.||.... . .......
T Consensus 172 ~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~-----~----~~~~~~~ 242 (432)
T 3p23_A 172 KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL-----Q----RQANILL 242 (432)
T ss_dssp CC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT-----T----HHHHHHT
T ss_pred eccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh-----H----HHHHHHh
Confidence 7653321 2233456999999999997 4567889999999999999999 999995211 0 1111111
Q ss_pred hcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 515 KEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
...... .. .........+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~-~~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 243 GACSLD-CL------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TCCCCT-TS------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccCCcc-cc------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111110 00 011233456789999999999999999999985
No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.8e-37 Score=347.31 Aligned_cols=238 Identities=20% Similarity=0.278 Sum_probs=193.4
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC--CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccceeeEEEEcCCc-----
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT--DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTE----- 359 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 359 (613)
.++|.+.+.||+|+||+||+|.+. +|+.||||++...........+.+|+.++..++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 368999999999999999999976 5889999998765444455678899999999999999999999987655
Q ss_pred eEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccc
Q 007200 360 RLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 439 (613)
Q Consensus 360 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla 439 (613)
.++||||+++++|.+++.. ++++..+..++.||+.||+|||++ +|+||||||+|||++.+ .+||+|||++
T Consensus 159 ~~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a 228 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAV 228 (681)
T ss_dssp EEEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTC
T ss_pred eEEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccc
Confidence 6999999999999987754 389999999999999999999999 99999999999999986 9999999999
Q ss_pred eecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccc
Q 007200 440 KLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL 519 (613)
Q Consensus 440 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 519 (613)
+..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||.......
T Consensus 229 ~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~------------------- 283 (681)
T 2pzi_A 229 SRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDG------------------- 283 (681)
T ss_dssp EETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSS-------------------
T ss_pred hhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccc-------------------
Confidence 876532 3355999999999987664 889999999999999999999885321100
Q ss_pred cccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHHhh
Q 007200 520 EQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPK-MSEVVRMLE 565 (613)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~~L~ 565 (613)
+. ...........+.+++.+||+.||++||+ ++++...|.
T Consensus 284 --~~----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 284 --LP----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp --CC----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred --cc----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 00 00011223357889999999999999995 555555554
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.8e-36 Score=304.30 Aligned_cols=229 Identities=12% Similarity=0.043 Sum_probs=182.0
Q ss_pred hhCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCc--ccHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 287 TDNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQ--GGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 287 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
.++|.+.+.||+|+||.||+|.+. +|+.||||++...... .....+.+|+.++..++||||+++++++.+++..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 467999999999999999999986 5899999999765432 2345789999999999999999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+++++|.++++.. ....++..++.|++.||+|||++ +|+||||||+|||++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------ 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------ 174 (286)
T ss_dssp EECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC------
T ss_pred EEecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc------
Confidence 9999999999998542 34567889999999999999999 99999999999999999999997443
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLV 523 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (613)
|++ .++.++|||||||++|||+||+.||.......... ......
T Consensus 175 ---------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~--------------~~~~~~ 218 (286)
T 3uqc_A 175 ---------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLA--------------PAERDT 218 (286)
T ss_dssp ---------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSE--------------ECCBCT
T ss_pred ---------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhH--------------HHHHHh
Confidence 333 36789999999999999999999996432111000 000000
Q ss_pred cCccCC--CCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHhhcC
Q 007200 524 DSDMEG--NYIEEEVEQLIQVALLCTQGSPMERPKMSEVVRMLEGD 567 (613)
Q Consensus 524 ~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 567 (613)
...... .........+.+++.+||+.||++| |+.|+++.|+..
T Consensus 219 ~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~ 263 (286)
T 3uqc_A 219 AGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQA 263 (286)
T ss_dssp TSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHH
T ss_pred ccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHH
Confidence 000000 0011233568999999999999999 999999999864
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=8.1e-37 Score=314.50 Aligned_cols=243 Identities=16% Similarity=0.179 Sum_probs=186.4
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccC-------cccHHHHHHHHHHHhhcc---------cCccce
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERT-------QGGELQFQTEVEMISMAV---------HRNLLR 349 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~e~~~l~~l~---------h~niv~ 349 (613)
..++|.+.+.||+|+||+||+|++ +|+.||||+++.... ......+.+|+.+++.++ ||||++
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 18 PTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp CHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred ccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 346788899999999999999998 689999999976532 223467889999988886 777777
Q ss_pred eeEEEE------------------------------cCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHH
Q 007200 350 LRGFCM------------------------------TPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAA 399 (613)
Q Consensus 350 l~~~~~------------------------------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~ 399 (613)
+.+.+. +....++||||+.+|++.+.+.. ..+++..++.++.||+
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHHHH
Confidence 766542 26789999999999987777743 2389999999999999
Q ss_pred HHHHHHH-hcCCCCeEecCCCCCceeecCCC--------------------cEEEeccccceecCCCCCceeeccccccc
Q 007200 400 RGLAYLH-DHCDPKIIHRDVKAANILLDEEF--------------------EAVVGDFGLAKLMDYKDTHVTTAVRGTIG 458 (613)
Q Consensus 400 ~~L~~LH-~~~~~~ivH~Dlk~~NIll~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~gt~~ 458 (613)
.||+||| ++ +|+||||||+|||++.++ .+||+|||+++..... ...||+.
T Consensus 172 ~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 88 999999999999999887 8999999999876532 2359999
Q ss_pred cccccccccCCCCCcccchhHHHH-HHHHHhCCCCcccccccCCCcchHHHHHHHHhhcccccc-cccCccCCCCcHHHH
Q 007200 459 HIAPEYLSTGKSSEKTDVFGYGVM-LLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQ-LVDSDMEGNYIEEEV 536 (613)
Q Consensus 459 y~aPE~~~~~~~~~~~DVwS~G~i-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 536 (613)
|+|||++.+.. +.++||||+|++ .+++++|..||.. ..|...... ..... ...............
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s 309 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-----------VLWLHYLTD-KMLKQMTFKTKCNTPAMKQIK 309 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-----------HHHHHHHHH-HHHHTCCCSSCCCSHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc-----------hhhhhHHHH-hhhhhhccCcccchhhhhhcC
Confidence 99999998766 889999998777 7789999999952 112111110 00000 011111111234567
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHH
Q 007200 537 EQLIQVALLCTQGSPMERPKMSEVV 561 (613)
Q Consensus 537 ~~l~~li~~cl~~dP~~RPt~~evl 561 (613)
..+.+++.+||+.| |++|++
T Consensus 310 ~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 310 RKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHHHhccC-----CHHHHH
Confidence 88999999999976 999998
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.6e-35 Score=299.62 Aligned_cols=226 Identities=22% Similarity=0.297 Sum_probs=177.4
Q ss_pred hCCCCC-CccccCcCcEEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHH-hhcccCccceeeEEEEc----CCce
Q 007200 288 DNFSNR-NILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMI-SMAVHRNLLRLRGFCMT----PTER 360 (613)
Q Consensus 288 ~~~~~~-~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~~~~ 360 (613)
++|.+. +.||+|+||.||+|.+. +++.||+|++... ..+.+|+.++ +...||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 456665 77999999999999975 7899999998532 3466888887 56689999999999876 6778
Q ss_pred EEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC---CCcEEEeccc
Q 007200 361 LLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE---EFEAVVGDFG 437 (613)
Q Consensus 361 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~---~~~~kl~DfG 437 (613)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 999999999999999987542 2489999999999999999999999 9999999999999998 7899999999
Q ss_pred cceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcccccccCCCcchHHHHHHHHhhcc
Q 007200 438 LAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 517 (613)
Q Consensus 438 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (613)
++.... +..++.++|||||||++|||++|+.||....... ....
T Consensus 166 ~a~~~~-----------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-------------~~~~ 209 (299)
T 3m2w_A 166 FAKETT-----------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA-------------ISPG 209 (299)
T ss_dssp TCEECT-----------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CC
T ss_pred cccccc-----------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh-------------hhHH
Confidence 986432 2346778999999999999999999995322100 0000
Q ss_pred cccccccCccCCCCc----HHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 518 KLEQLVDSDMEGNYI----EEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 518 ~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
.......... ..+ ......+.+++..||+.||++|||+.|+++
T Consensus 210 ~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 210 MKTRIRMGQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp SCCSSCTTCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHhhccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0000000000 011 123467899999999999999999999987
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-36 Score=319.85 Aligned_cols=243 Identities=14% Similarity=0.097 Sum_probs=179.6
Q ss_pred hCCCCCCccccCcCcEEEEEEeC-CCCEEEEEEeccccCcc--cHHHHHHHHHHHhhccc-Ccc---------ceeeEE-
Q 007200 288 DNFSNRNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERTQG--GELQFQTEVEMISMAVH-RNL---------LRLRGF- 353 (613)
Q Consensus 288 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h-~ni---------v~l~~~- 353 (613)
..|...+.||+|+||+||+|.+. +|+.||||+++...... ....+.+|+.++..+.| +|. +...+.
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 34667789999999999999965 79999999987433222 24578899999998876 221 111111
Q ss_pred -----------EEc-----CCceEEEEecccCCcchhhhhcc---CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 007200 354 -----------CMT-----PTERLLVYPFMVNGSVASCLRER---GQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKII 414 (613)
Q Consensus 354 -----------~~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~iv 414 (613)
+.. ....+++|+++ +++|.++++.. .....++++..+..++.|+++||+|||++ +|+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ii 233 (413)
T 3dzo_A 158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 233 (413)
T ss_dssp ECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 111 12346666655 68999888521 22233588899999999999999999999 999
Q ss_pred ecCCCCCceeecCCCcEEEeccccceecCCCCCceeecccccccccccccc----------ccCCCCCcccchhHHHHHH
Q 007200 415 HRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL----------STGKSSEKTDVFGYGVMLL 484 (613)
Q Consensus 415 H~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DVwS~G~il~ 484 (613)
||||||+|||++.++.+||+|||+++..... .....| +.|+|||.+ .+..++.++|||||||++|
T Consensus 234 HrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 234 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred cCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 9999999999999999999999999865422 344557 999999999 5556888999999999999
Q ss_pred HHHhCCCCcccccccCCCcchHHHHHHHHhhcccccccccCccCCCCcHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 007200 485 ELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEQLVDSDMEGNYIEEEVEQLIQVALLCTQGSPMERPKMSEVVR 562 (613)
Q Consensus 485 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 562 (613)
||++|+.||....... .....+.... ..+..+.+++..||+.||++|||+.++++
T Consensus 309 elltg~~Pf~~~~~~~-----------------~~~~~~~~~~------~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAALG-----------------GSEWIFRSCK------NIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGGS-----------------CSGGGGSSCC------CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchhh-----------------hHHHHHhhcc------cCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999996332111 1111111100 11257899999999999999999988865
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=1.1e-29 Score=277.85 Aligned_cols=187 Identities=15% Similarity=0.063 Sum_probs=131.7
Q ss_pred ccccCcCcEEEEEEe-CCCCEEEEEEeccccC---------cccHHHHHHHHHHHhhc-ccCccceeeEEEEcCCceEEE
Q 007200 295 ILGRGGFGKVYKGRL-TDGSLVAVKRLKEERT---------QGGELQFQTEVEMISMA-VHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 295 ~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 363 (613)
..+.|+.|.+..++. ..|+.+|+|++..... +....+|.+|+++|+++ .|+||+++++++.++...|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 356666666665542 2588999999975421 12234689999999999 699999999999999999999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||++|++|.+++...+ +++.. +|+.||+.||+|+|++ |||||||||+|||+++++++||+|||+|+...
T Consensus 321 MEyv~G~~L~d~i~~~~----~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE----EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EECCCSEEHHHHHHTTC----CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EecCCCCcHHHHHHhCC----CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 99999999999998654 25553 5889999999999999 99999999999999999999999999998765
Q ss_pred CCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCc
Q 007200 444 YKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 493 (613)
Q Consensus 444 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~ 493 (613)
... ......+||+.|||||++.+ .+..++|+||+|++++++.++..++
T Consensus 391 ~~~-~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 391 QDC-SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp ----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred CCC-ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 332 23345679999999999865 4677899999999988887766554
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=1.1e-26 Score=236.19 Aligned_cols=179 Identities=31% Similarity=0.593 Sum_probs=163.8
Q ss_pred ccCchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcc--ceeEEeCCC---CCeEEEEcCCCCccc--ccchhhhCCCCCC
Q 007200 24 VASNAEGDALNALKTNLADPNNVLQSWDATLVNPCT--WFHVTCNSE---NSVTRVDLGNANLSG--QLVSQLGQLTNLQ 96 (613)
Q Consensus 24 ~~~~~~~~~l~~~k~~~~~~~~~~~~w~~~~~~~C~--~~gv~c~~~---~~l~~L~l~~n~l~~--~~~~~~~~l~~L~ 96 (613)
.|.+.|++||++||+.+.||. .+++|+. +.+||. |.||+|+.. .+|+.|+|++|++++ .+|..+.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 467889999999999999886 7899975 478998 999999764 689999999999999 8999999999999
Q ss_pred EEEccc-ccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCC
Q 007200 97 YLELYS-NNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNN 175 (613)
Q Consensus 97 ~L~L~~-N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 175 (613)
+|+|++ |.+++.+|..|.++++|++|+|++|+|++.+|..|.++++|++|+|++|++++.+|..+..+++|+.|+|++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccCCCC-CCCCC-ccccccccCCCCCCCC
Q 007200 176 KLTGDIPT-NGSFS-LFTPISFANNQLNNPP 204 (613)
Q Consensus 176 ~l~~~~~~-~~~~~-~l~~l~l~~N~i~~~~ 204 (613)
+|++.++. ...++ .|+.|++++|.+....
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~ 190 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKI 190 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEEC
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccC
Confidence 99966654 46776 8999999999887543
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=1.4e-26 Score=251.95 Aligned_cols=185 Identities=14% Similarity=0.213 Sum_probs=146.3
Q ss_pred CCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcc-------cHHHHHHHHHHHhhcccCccceeeEEEEcCCceEEE
Q 007200 291 SNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQG-------GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 363 (613)
Q Consensus 291 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 363 (613)
...+.||+|+||+||+|.. .++.+++|......... ...++.+|++++++++||||+++..++......++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999955 47889999875432211 123578999999999999999777777777888999
Q ss_pred EecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 364 YPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 364 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||+++++|.++++. +..++.|+++||+|||++ +|+||||||+|||++. .+||+|||+++...
T Consensus 418 mE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~ 480 (540)
T 3en9_A 418 MSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISN 480 (540)
T ss_dssp EECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred EECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence 999999999999875 458899999999999999 9999999999999999 99999999999875
Q ss_pred CCCCce------eecccccccccccccccc--CCCCCcccchhHHHHHHHHHhCCCCc
Q 007200 444 YKDTHV------TTAVRGTIGHIAPEYLST--GKSSEKTDVFGYGVMLLELITGQRAF 493 (613)
Q Consensus 444 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DVwS~G~il~elltg~~p~ 493 (613)
...... .....||+.|||||++.. ..|+..+|+||..+-..+-+.++.+|
T Consensus 481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 432211 235679999999999977 56788899999999888888777766
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=2.5e-23 Score=207.59 Aligned_cols=153 Identities=14% Similarity=0.055 Sum_probs=121.6
Q ss_pred HHHHHHhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCc-----------------ccHHHHHHHHHHHhhcc
Q 007200 281 RELQVATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQ-----------------GGELQFQTEVEMISMAV 343 (613)
Q Consensus 281 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~e~~~l~~l~ 343 (613)
..+......|.+.+.||+|+||.||+|.+.+|+.||+|.++..... .....+.+|+.+++.++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 3444445567777999999999999999977999999999643221 12456889999999998
Q ss_pred cCccceeeEEEEcCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 007200 344 HRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANI 423 (613)
Q Consensus 344 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NI 423 (613)
| +++.+++.. +..++||||+++++|.+ +.. .....++.|++.||+|||+. +|+||||||+||
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NI 224 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNV 224 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHE
Confidence 4 666665433 56699999999999998 421 12457999999999999999 999999999999
Q ss_pred eecCCCcEEEeccccceecCCCCCceeeccccccccccccccc
Q 007200 424 LLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLS 466 (613)
Q Consensus 424 ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~ 466 (613)
|++ ++.+||+|||+++ .+..|+|||.+.
T Consensus 225 Ll~-~~~vkl~DFG~a~--------------~~~~~~a~e~l~ 252 (282)
T 1zar_A 225 LVS-EEGIWIIDFPQSV--------------EVGEEGWREILE 252 (282)
T ss_dssp EEE-TTEEEECCCTTCE--------------ETTSTTHHHHHH
T ss_pred EEE-CCcEEEEECCCCe--------------ECCCCCHHHHHH
Confidence 999 9999999999997 344578999874
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=7.6e-24 Score=241.46 Aligned_cols=178 Identities=29% Similarity=0.389 Sum_probs=129.8
Q ss_pred hccCchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccceeEEeCCCCCeEEEEcCCCCcccc---cch------------
Q 007200 23 RVASNAEGDALNALKTNLADPNNVLQSWDATLVNPCTWFHVTCNSENSVTRVDLGNANLSGQ---LVS------------ 87 (613)
Q Consensus 23 ~~~~~~~~~~l~~~k~~~~~~~~~~~~w~~~~~~~C~~~gv~c~~~~~l~~L~l~~n~l~~~---~~~------------ 87 (613)
+.+.+.|++||++||+++.||. .+++|+ .+.+||.|.||+|+ .++|+.|+|+++++.|. ++.
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~-~l~~W~-~~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~ 83 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKN-LLPDWS-SNKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLF 83 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTT-SSTTCC-TTSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEE
T ss_pred ccCCHHHHHHHHHHHhhCCCcc-cccCCC-CCCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCcccccC
Confidence 3345679999999999999998 899997 45789999999998 67999999999999886 554
Q ss_pred -----------hhhCCCCCCEEEcccccCCCCCcc--ccccCCcCCeEeccCccCCCCCCccc-ccccccccccccCccc
Q 007200 88 -----------QLGQLTNLQYLELYSNNISGKVPE--ELGNLTNLVSLDLYLNNLNGPIPTTL-GKLSKLRFLRLNNNSL 153 (613)
Q Consensus 88 -----------~~~~l~~L~~L~L~~N~i~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l 153 (613)
.++++++|++|+|++|.++|.+|. .+.++++|++|+|++|.+++.+|..+ .++++|++|+|++|++
T Consensus 84 ~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 163 (768)
T 3rgz_A 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSI 163 (768)
T ss_dssp CTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCC
T ss_pred CcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCcc
Confidence 556667777777777777776776 67777777777777777776666654 6677777777777777
Q ss_pred cCccccc---cccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 154 MGEIPRS---LTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 154 ~~~~~~~---~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
++..|.. +.++++|+.|++++|.+++.++. ..+++|+.|++++|.+...+
T Consensus 164 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~l~~L~~L~Ls~n~l~~~~ 216 (768)
T 3rgz_A 164 SGANVVGWVLSDGCGELKHLAISGNKISGDVDV-SRCVNLEFLDVSSNNFSTGI 216 (768)
T ss_dssp EEETHHHHHHTTCCTTCCEEECCSSEEESCCBC-TTCTTCCEEECCSSCCCSCC
T ss_pred CCcCChhhhhhccCCCCCEEECCCCcccccCCc-ccCCcCCEEECcCCcCCCCC
Confidence 6655554 55566666666666666554433 45566666666666665543
No 256
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=2.6e-23 Score=236.40 Aligned_cols=172 Identities=20% Similarity=0.256 Sum_probs=149.8
Q ss_pred CchHHHHHHHHHHhcCCCCCCCCCCCCCC----CCC--ccc------------eeEEeCCCCCeEEEEcCCCCcccccch
Q 007200 26 SNAEGDALNALKTNLADPNNVLQSWDATL----VNP--CTW------------FHVTCNSENSVTRVDLGNANLSGQLVS 87 (613)
Q Consensus 26 ~~~~~~~l~~~k~~~~~~~~~~~~w~~~~----~~~--C~~------------~gv~c~~~~~l~~L~l~~n~l~~~~~~ 87 (613)
...|++||++||+++.+| +|+... .+| |.| .||+|+...+|+.|+|++|+|+|.+|.
T Consensus 267 ~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 267 YIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEECG
T ss_pred chHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcCch
Confidence 346999999999999887 886654 466 999 999998778999999999999999999
Q ss_pred hhhCCCCCCEEEc-ccccCCCC----------------------------------------------------------
Q 007200 88 QLGQLTNLQYLEL-YSNNISGK---------------------------------------------------------- 108 (613)
Q Consensus 88 ~~~~l~~L~~L~L-~~N~i~~~---------------------------------------------------------- 108 (613)
.|++|++|+.|+| ++|.++|.
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 9999999999999 77765443
Q ss_pred ------------------CccccccCCcCCeEeccCccCCC-----------------CCCcccc--cccccccccccCc
Q 007200 109 ------------------VPEELGNLTNLVSLDLYLNNLNG-----------------PIPTTLG--KLSKLRFLRLNNN 151 (613)
Q Consensus 109 ------------------~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~L~~N 151 (613)
+|..|.+|++|++|+|++|+|++ .+|..++ ++++|++|+|++|
T Consensus 422 ~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N 501 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNC 501 (876)
T ss_dssp CCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESC
T ss_pred ccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCC
Confidence 78889999999999999999998 3898877 9999999999999
Q ss_pred cccCccccccccccchhhhhhcCCC-ccc-CCC-CC-------CCCCccccccccCCCCCC
Q 007200 152 SLMGEIPRSLTNVNSLQVLDLSNNK-LTG-DIP-TN-------GSFSLFTPISFANNQLNN 202 (613)
Q Consensus 152 ~l~~~~~~~~~~l~~L~~L~l~~N~-l~~-~~~-~~-------~~~~~l~~l~l~~N~i~~ 202 (613)
++.+.+|..|.++++|+.|+|++|+ +++ .+| .. ..+++|+.|++++|.+..
T Consensus 502 ~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ 562 (876)
T 4ecn_A 502 PNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEE 562 (876)
T ss_dssp TTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCB
T ss_pred CCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCc
Confidence 9999999999999999999999998 887 333 22 344588999999998883
No 257
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.86 E-value=1.9e-22 Score=224.86 Aligned_cols=174 Identities=22% Similarity=0.288 Sum_probs=152.4
Q ss_pred chHHHHHHHHHHhcCCCC-C-------CCCCCCCCCCCCccc---eeEEeCCCCCeEEEEcCCCCcccccchhhhCCCCC
Q 007200 27 NAEGDALNALKTNLADPN-N-------VLQSWDATLVNPCTW---FHVTCNSENSVTRVDLGNANLSGQLVSQLGQLTNL 95 (613)
Q Consensus 27 ~~~~~~l~~~k~~~~~~~-~-------~~~~w~~~~~~~C~~---~gv~c~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L 95 (613)
..|++||.+|+.++..++ . ...+|+.. .++|.| .||+|+..++|+.|+|++|+++|.+|..+++|++|
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~-~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L 107 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN-KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTEL 107 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS-SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTC
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC-CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccc
Confidence 368999999999987542 2 23489864 899999 99999887899999999999999999999999999
Q ss_pred CEEEccccc-----------------------------------------------------------------------
Q 007200 96 QYLELYSNN----------------------------------------------------------------------- 104 (613)
Q Consensus 96 ~~L~L~~N~----------------------------------------------------------------------- 104 (613)
+.|+|++|.
T Consensus 108 ~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~ 187 (636)
T 4eco_A 108 EVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQ 187 (636)
T ss_dssp CEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTT
T ss_pred eEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhh
Confidence 999999994
Q ss_pred -------CCCCCccccccCCcCCeEeccCccCCCC-----------------CCcccc--cccccccccccCccccCccc
Q 007200 105 -------ISGKVPEELGNLTNLVSLDLYLNNLNGP-----------------IPTTLG--KLSKLRFLRLNNNSLMGEIP 158 (613)
Q Consensus 105 -------i~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~~ 158 (613)
+++ +|..|+++++|++|+|++|.|++. +|..++ ++++|++|+|++|++.+.+|
T Consensus 188 l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p 266 (636)
T 4eco_A 188 IGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLP 266 (636)
T ss_dssp TTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCC
T ss_pred hccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccCh
Confidence 345 788899999999999999999985 999999 99999999999999999999
Q ss_pred cccccccchhhhhhcCCC-ccc-CCC-CCCCC------CccccccccCCCCCC
Q 007200 159 RSLTNVNSLQVLDLSNNK-LTG-DIP-TNGSF------SLFTPISFANNQLNN 202 (613)
Q Consensus 159 ~~~~~l~~L~~L~l~~N~-l~~-~~~-~~~~~------~~l~~l~l~~N~i~~ 202 (613)
..+.++++|+.|+|++|+ +++ .+| ..+.+ ++|+.|++++|.+..
T Consensus 267 ~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ 319 (636)
T 4eco_A 267 TFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKT 319 (636)
T ss_dssp TTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSS
T ss_pred HHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCc
Confidence 999999999999999998 987 444 33444 889999999999884
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.85 E-value=2e-22 Score=206.00 Aligned_cols=177 Identities=20% Similarity=0.281 Sum_probs=151.5
Q ss_pred cCchHHHHHHHHHHhc-CCCCCCCCCCC---CCCCCCccceeEEeCC---------CCCeEEEEcCCCCcccccchhhhC
Q 007200 25 ASNAEGDALNALKTNL-ADPNNVLQSWD---ATLVNPCTWFHVTCNS---------ENSVTRVDLGNANLSGQLVSQLGQ 91 (613)
Q Consensus 25 ~~~~~~~~l~~~k~~~-~~~~~~~~~w~---~~~~~~C~~~gv~c~~---------~~~l~~L~l~~n~l~~~~~~~~~~ 91 (613)
+...+++||++||..+ .||.+.+++|. ....++|.|.|+.|.. ..+|+.|+|++|+++ .+|..+.+
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 4467999999999988 47877788994 4567899999999942 368999999999998 67788888
Q ss_pred CCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCcccccccc--------
Q 007200 92 LTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTN-------- 163 (613)
Q Consensus 92 l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-------- 163 (613)
+++|++|+|++|.|+ .+|..+..+++|++|+|++|.|+ .+|..+.++++|++|+|++|++.+.+|..+..
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 999999999999999 88888999999999999999999 78989999999999999998888888877654
Q ss_pred -ccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 164 -VNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 164 -l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
+++|+.|+|++|.|+..+.....+++|+.|++++|.+...+
T Consensus 181 ~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~ 222 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALG 222 (328)
T ss_dssp ESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCCC
T ss_pred cCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcCc
Confidence 88899999999998866666677888889999998887543
No 259
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=6e-21 Score=184.53 Aligned_cols=150 Identities=24% Similarity=0.249 Sum_probs=136.7
Q ss_pred CCCCccceeEEeCCC----------CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEe
Q 007200 54 LVNPCTWFHVTCNSE----------NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLD 123 (613)
Q Consensus 54 ~~~~C~~~gv~c~~~----------~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~ 123 (613)
....|.|.+|.|+.. .+++.|+|++|.|++..+..|.++++|+.|+|++|+|++..+..|..+++|++|+
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE
Confidence 357899999999652 4799999999999998899999999999999999999977677789999999999
Q ss_pred ccCccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCC
Q 007200 124 LYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNN 202 (613)
Q Consensus 124 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~ 202 (613)
|++|+|++..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++. ...+++|+.|++++|++.|
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 9999999877788999999999999999999 7889999999999999999999988875 4778999999999999988
Q ss_pred CC
Q 007200 203 PP 204 (613)
Q Consensus 203 ~~ 204 (613)
..
T Consensus 174 ~c 175 (229)
T 3e6j_A 174 EC 175 (229)
T ss_dssp TB
T ss_pred Cc
Confidence 64
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=1.8e-20 Score=179.88 Aligned_cols=147 Identities=22% Similarity=0.302 Sum_probs=134.6
Q ss_pred CccceeEEeCCC----------CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccC
Q 007200 57 PCTWFHVTCNSE----------NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYL 126 (613)
Q Consensus 57 ~C~~~gv~c~~~----------~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~ 126 (613)
.|.|..|.|... .+++.|+|++|+|++..+..|..+++|+.|+|++|+|++..|+.|.++++|++|+|++
T Consensus 10 ~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 10 TCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp EEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred EECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 368889999642 3799999999999988888999999999999999999988899999999999999999
Q ss_pred ccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCC
Q 007200 127 NNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 127 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~ 203 (613)
|+|+...+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.++. ...+++|+.|++++|++.|.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 999977677789999999999999999988899999999999999999999998876 47789999999999999885
No 261
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.81 E-value=8.4e-20 Score=173.72 Aligned_cols=148 Identities=24% Similarity=0.264 Sum_probs=133.2
Q ss_pred CccceeEEeCCC----------CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccC
Q 007200 57 PCTWFHVTCNSE----------NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYL 126 (613)
Q Consensus 57 ~C~~~gv~c~~~----------~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~ 126 (613)
.|.|.+|.|+.. .+++.|+|++|++++..+..|.++++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 478999999642 3699999999999987777899999999999999999977777789999999999999
Q ss_pred ccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCC
Q 007200 127 NNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 127 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~ 204 (613)
|+|++..+..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|.|++.++.. ..+++|+.|++++|++.+..
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 164 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 164 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCC
Confidence 9999777777999999999999999999777777899999999999999999888764 77899999999999888754
No 262
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=5.1e-20 Score=176.78 Aligned_cols=147 Identities=18% Similarity=0.251 Sum_probs=133.0
Q ss_pred ccceeEEeCCC----------CCeEEEEcCCCCcccccc-hhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccC
Q 007200 58 CTWFHVTCNSE----------NSVTRVDLGNANLSGQLV-SQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYL 126 (613)
Q Consensus 58 C~~~gv~c~~~----------~~l~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~ 126 (613)
|.|..+.|+.. ..++.|+|++|+|++..+ ..|.++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 68888999642 258899999999998755 5689999999999999999988888999999999999999
Q ss_pred ccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCC
Q 007200 127 NNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 127 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~ 204 (613)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.++. ...+++|+.|++++|++.|..
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 999988888899999999999999999988899999999999999999999998665 477899999999999998853
No 263
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.79 E-value=5e-19 Score=173.61 Aligned_cols=137 Identities=23% Similarity=0.275 Sum_probs=124.1
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|++++..+..|.++++|++|+|++|.|++..|..|..+++|++|+|++|+|++..+..|..+++|++|+|
T Consensus 35 ~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 35 ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 36899999999999888889999999999999999999888888999999999999999999887888999999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
++|+|++..+..|..+++|+.|+|++|.|++.++. ...+++|+.|++++|.+...++
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 172 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPH 172 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCH
Confidence 99999977777788999999999999999988875 4788999999999999987654
No 264
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=2.8e-19 Score=176.05 Aligned_cols=138 Identities=17% Similarity=0.190 Sum_probs=106.2
Q ss_pred CCCCCccccCcCcEEEEEEe-CCCCE--EEEEEeccccCc-----------------------ccHHHHHHHHHHHhhcc
Q 007200 290 FSNRNILGRGGFGKVYKGRL-TDGSL--VAVKRLKEERTQ-----------------------GGELQFQTEVEMISMAV 343 (613)
Q Consensus 290 ~~~~~~ig~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~-----------------------~~~~~~~~e~~~l~~l~ 343 (613)
|.+.+.||+|+||.||+|.+ .+|+. ||||+++..... .....+.+|+..+..+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999998 57888 999987543211 01135788999999999
Q ss_pred cCcc--ceeeEEEEcCCceEEEEecccC-C----cchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEe
Q 007200 344 HRNL--LRLRGFCMTPTERLLVYPFMVN-G----SVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLH-DHCDPKIIH 415 (613)
Q Consensus 344 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH-~~~~~~ivH 415 (613)
|+++ ..++++ ...++||||+.+ | +|.+.... .++..+..++.|++.||.||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8864 344432 367899999942 4 44444322 224467889999999999999 88 9999
Q ss_pred cCCCCCceeecCCCcEEEeccccceecC
Q 007200 416 RDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 416 ~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
|||||+|||++. .++|+|||+|....
T Consensus 195 rDlkp~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTTCEETT
T ss_pred CCCCHHHEEEcC--cEEEEECcccccCC
Confidence 999999999998 99999999997543
No 265
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.75 E-value=3.2e-18 Score=167.78 Aligned_cols=136 Identities=26% Similarity=0.275 Sum_probs=126.3
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|.|++..+..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 58 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 46899999999999998888899999999999999999988888899999999999999999987777899999999999
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~ 203 (613)
|++|+|++..+..|..+++|+.|+|++|+|++.++. ...+++|+.|++++|++.|.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 999999977777899999999999999999998875 47789999999999999886
No 266
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.75 E-value=4.6e-18 Score=168.60 Aligned_cols=136 Identities=26% Similarity=0.295 Sum_probs=105.4
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccccc
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLN 149 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 149 (613)
+++.|+|++|++++..+..|.++++|++|+|++|.|+...+..|..+++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 47788888888876666678888888888888888886556667778888888888888886666677788888888888
Q ss_pred CccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCCC
Q 007200 150 NNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 150 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~~ 205 (613)
+|++++..+..|..+++|+.|+|++|.|++.++.. ..+++|+.|++++|.+...++
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 174 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPE 174 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeCh
Confidence 88888766777778888888888888888776653 667788888888887776544
No 267
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=7.2e-19 Score=164.94 Aligned_cols=128 Identities=23% Similarity=0.351 Sum_probs=64.6
Q ss_pred EEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCcc-ccccCCcCCeEeccCccCCCCCCcccccccccccccccCc
Q 007200 73 RVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPE-ELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNN 151 (613)
Q Consensus 73 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 151 (613)
.|++++|+|+ .+|..+. .+|+.|+|++|+|++..+. .|..+++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4444455554 3333222 1455555555555543332 2555555555555555555555555555555555555555
Q ss_pred cccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCC
Q 007200 152 SLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 152 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~ 203 (613)
+|++..+..|.++++|+.|+|++|+|++.++.. ..+++|+.|++++|++.|.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 555444444555555555555555555544332 4445555555555555543
No 268
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.74 E-value=6.1e-19 Score=189.91 Aligned_cols=129 Identities=27% Similarity=0.197 Sum_probs=80.5
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccc-ccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLG-KLSKLRFLR 147 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ 147 (613)
++++.|+|++|.|++..+. .+++|+.|+|++|.|++..|..|..+++|++|+|++|.|++.+|..+. .+++|++|+
T Consensus 99 ~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 4566666666666654433 345666666666666666666666666666666666666666666554 566666666
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNN 202 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~ 202 (613)
|++|.|++. |. +..+++|+.|+|++|.|++.++....+++|+.|++++|.+..
T Consensus 176 Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 228 (487)
T 3oja_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL 228 (487)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE
T ss_pred cCCCccccc-cc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc
Confidence 666666644 22 234666666666666666666655566666666666666664
No 269
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.73 E-value=3.4e-18 Score=190.54 Aligned_cols=165 Identities=18% Similarity=0.186 Sum_probs=132.0
Q ss_pred CCCCCCCCCCCCC---CCCCccce----eEEeCC----------CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccc
Q 007200 41 ADPNNVLQSWDAT---LVNPCTWF----HVTCNS----------ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSN 103 (613)
Q Consensus 41 ~~~~~~~~~w~~~---~~~~C~~~----gv~c~~----------~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 103 (613)
+|+...+++|+.. ..+||.+. .|.|.. +.+++.|||++|.|++..+..|.++++|++|+|++|
T Consensus 7 ~~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N 86 (635)
T 4g8a_A 7 KDDDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRC 86 (635)
T ss_dssp ------------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CCCcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCC
Confidence 3555556666432 23467553 478964 247999999999999888889999999999999999
Q ss_pred cCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCC-C
Q 007200 104 NISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDI-P 182 (613)
Q Consensus 104 ~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~ 182 (613)
+|++..|++|.+|++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|+++++|+.|+|++|.|++.. +
T Consensus 87 ~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~ 166 (635)
T 4g8a_A 87 EIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP 166 (635)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred cCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCc
Confidence 999888889999999999999999999777788999999999999999999777778999999999999999998643 3
Q ss_pred C-CCCCCccccccccCCCCCCCCC
Q 007200 183 T-NGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 183 ~-~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
. ...++.|+.|++++|.+...++
T Consensus 167 ~~~~~l~~L~~L~L~~N~l~~~~~ 190 (635)
T 4g8a_A 167 EYFSNLTNLEHLDLSSNKIQSIYC 190 (635)
T ss_dssp GGGGGCTTCCEEECCSSCCCEECG
T ss_pred hhhccchhhhhhcccCcccccccc
Confidence 3 4778999999999999987654
No 270
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.73 E-value=1.3e-17 Score=165.48 Aligned_cols=135 Identities=30% Similarity=0.354 Sum_probs=88.1
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
++++.|+|++|.+++. ..+.++++|++|+|++|.|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 63 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 140 (272)
T 3rfs_A 63 PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140 (272)
T ss_dssp TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEEC
Confidence 4666777777766642 35666667777777777776655555666677777777777766655556666667777777
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~~ 205 (613)
++|++++..+..+..+++|+.|++++|+|++.++.. ..+++|+.|++++|.+...++
T Consensus 141 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (272)
T 3rfs_A 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPD 198 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCH
Confidence 777666555555666667777777777766665543 556666677777766665443
No 271
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.71 E-value=8.8e-18 Score=173.93 Aligned_cols=147 Identities=25% Similarity=0.277 Sum_probs=130.6
Q ss_pred ccceeEEeCCC----------CCeEEEEcCCCCcccccchhhh-CCCCCCEEEcccccCCCCCccccccCCcCCeEeccC
Q 007200 58 CTWFHVTCNSE----------NSVTRVDLGNANLSGQLVSQLG-QLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYL 126 (613)
Q Consensus 58 C~~~gv~c~~~----------~~l~~L~l~~n~l~~~~~~~~~-~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~ 126 (613)
|.+..|.|... ..++.|+|++|+|++..+..+. ++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56777888542 3588999999999988888887 999999999999999988888899999999999999
Q ss_pred ccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCC----CCCCccccccccCCCCCC
Q 007200 127 NNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN----GSFSLFTPISFANNQLNN 202 (613)
Q Consensus 127 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~----~~~~~l~~l~l~~N~i~~ 202 (613)
|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++.+... ..+++|+.|++++|.+..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 9999877888999999999999999999888899999999999999999999887764 468999999999999886
Q ss_pred CC
Q 007200 203 PP 204 (613)
Q Consensus 203 ~~ 204 (613)
.+
T Consensus 178 l~ 179 (361)
T 2xot_A 178 LP 179 (361)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 272
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=1.3e-17 Score=156.39 Aligned_cols=147 Identities=22% Similarity=0.277 Sum_probs=123.2
Q ss_pred CccceeEEeCCC----------CCeEEEEcCCCCcccccch-hhhCCCCCCEEEcccccCCCCCccccccCCcCCeEecc
Q 007200 57 PCTWFHVTCNSE----------NSVTRVDLGNANLSGQLVS-QLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLY 125 (613)
Q Consensus 57 ~C~~~gv~c~~~----------~~l~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls 125 (613)
-|.|..+.|+.. .+++.|+|++|.|++..+. .|.++++|+.|+|++|+|++..|..|.++++|++|+|+
T Consensus 7 ~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 7 HCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred EECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 368888999642 3799999999999977664 58999999999999999999989999999999999999
Q ss_pred CccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCC
Q 007200 126 LNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 126 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
+|+|++..+..|.++++|++|+|++|+|++..|..+..+++|+.|+|++|++++..+.......+....+.++...|.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCC
Confidence 999998888889999999999999999999889999999999999999999997654321112233334445544444
No 273
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.70 E-value=1.1e-17 Score=190.51 Aligned_cols=120 Identities=36% Similarity=0.602 Sum_probs=112.5
Q ss_pred CCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCccccccccccchhhh
Q 007200 91 QLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVL 170 (613)
Q Consensus 91 ~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 170 (613)
++++|+.|+|++|+++|.+|..|+++++|+.|+|++|+|+|.+|..|+++++|+.|||++|+++|.+|..+..+++|+.|
T Consensus 630 ~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 709 (768)
T 3rgz_A 630 NNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEI 709 (768)
T ss_dssp SSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEE
T ss_pred ccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEE
Confidence 35779999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCcccCCCCCCCCCccccccccCCCCCCCCCCCCCCC
Q 007200 171 DLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPPPSPPPPL 211 (613)
Q Consensus 171 ~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~~~~~~~~ 211 (613)
+|++|+++|.+|..+.+..+...++.||+..|++|.+ +|.
T Consensus 710 ~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~ 749 (768)
T 3rgz_A 710 DLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCD 749 (768)
T ss_dssp ECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCC
T ss_pred ECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCC
Confidence 9999999999999888999999999999999987654 453
No 274
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.70 E-value=3.4e-17 Score=163.95 Aligned_cols=135 Identities=28% Similarity=0.310 Sum_probs=109.7
Q ss_pred CCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 67 SENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
...+++.|+|++|.|++..+. ..+++|+.|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..|.++++|++|
T Consensus 53 ~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L 129 (290)
T 1p9a_G 53 PYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQEL 129 (290)
T ss_dssp TCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEE
T ss_pred cCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEE
Confidence 346788889988888854432 67888888888888888 677778888888888888888887777788888888888
Q ss_pred cccCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCC
Q 007200 147 RLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 147 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~ 204 (613)
+|++|+|++..+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|.+...+
T Consensus 130 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip 188 (290)
T 1p9a_G 130 YLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIP 188 (290)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred ECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccC
Confidence 88888888776777788888888888888888877765 56788888888888887544
No 275
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=3e-17 Score=153.88 Aligned_cols=128 Identities=25% Similarity=0.304 Sum_probs=113.5
Q ss_pred EEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCc
Q 007200 72 TRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNN 151 (613)
Q Consensus 72 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 151 (613)
+.+++++|+|+ .+|..+ .++|+.|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~--~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGI--PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCC--CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCC--CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46788888988 455544 368999999999998 78889999999999999999999888889999999999999999
Q ss_pred cccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCC
Q 007200 152 SLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 152 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~ 203 (613)
+|++..+..|..+++|+.|+|++|.|+..++. ...+++|+.|++++|++.|.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99988888899999999999999999988876 46789999999999999875
No 276
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.69 E-value=5.9e-17 Score=160.59 Aligned_cols=138 Identities=25% Similarity=0.285 Sum_probs=120.0
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|.|+...+..|.++++|++|+|++|.|++..+..|..+++|++|+|++|++++..+..|..+++|++|+
T Consensus 60 l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 139 (270)
T 2o6q_A 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLS 139 (270)
T ss_dssp CTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEE
Confidence 45899999999999977677788999999999999999977777889999999999999999988888889999999999
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
|++|+|++..+..|..+++|+.|+|++|.|++.++. ...+++|+.|++++|.+...++
T Consensus 140 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 198 (270)
T 2o6q_A 140 LGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPE 198 (270)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCH
Confidence 999999976666788999999999999999988775 3678899999999998886554
No 277
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.69 E-value=1.7e-17 Score=151.96 Aligned_cols=135 Identities=23% Similarity=0.281 Sum_probs=121.8
Q ss_pred CCeEEEEcCCCCcc-cccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 69 NSVTRVDLGNANLS-GQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 69 ~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
.+++.|+|++|+++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|++|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 58999999999998 77888899999999999999999965 6799999999999999999987888888999999999
Q ss_pred ccCccccCcc-ccccccccchhhhhhcCCCcccCCC----CCCCCCccccccccCCCCCCCCC
Q 007200 148 LNNNSLMGEI-PRSLTNVNSLQVLDLSNNKLTGDIP----TNGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 148 L~~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
|++|+|++.. +..+..+++|+.|++++|++++.++ ....+++|+.|++++|.+...+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhccc
Confidence 9999999643 3789999999999999999998887 45789999999999998876543
No 278
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=3.2e-17 Score=151.59 Aligned_cols=133 Identities=23% Similarity=0.287 Sum_probs=87.7
Q ss_pred ccceeEEeCCCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccc
Q 007200 58 CTWFHVTCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTL 137 (613)
Q Consensus 58 C~~~gv~c~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 137 (613)
|.|.++.|+ +|+++. +|..+ .++|+.|+|++|++++..+..|..+++|++|+|++|+|++..+..|
T Consensus 7 C~~~~l~~~-----------~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 72 (177)
T 2o6r_A 7 CSGTEIRCN-----------SKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVF 72 (177)
T ss_dssp EETTEEECC-----------SSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred eCCCEEEec-----------CCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHc
Confidence 566666664 445552 33222 3567777777777776555566777777777777777775555566
Q ss_pred ccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCC
Q 007200 138 GKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 138 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~ 204 (613)
..+++|++|+|++|+|++..+..+..+++|+.|+|++|.|++.++.. ..+++|+.|++++|++.|..
T Consensus 73 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 73 DKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 77777777777777777555556667777777777777777666654 45677777777777776654
No 279
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.69 E-value=1e-17 Score=169.86 Aligned_cols=133 Identities=27% Similarity=0.437 Sum_probs=78.1
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccccc
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLN 149 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 149 (613)
.++.|+|++|.+++.+|..+..++ |+.|+|++|.+++.+|..|..+++|++|+|++|.+++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 344444444444444444444444 55555555555545555555555666666666666544443 5556666666666
Q ss_pred CccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 150 NNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 150 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
+|+|++.+|..+..+++|+.|+|++|+|++.+|....+++|+.+++++|+..|+.
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCC
Confidence 6666666666666666666666666666666666566666666666666655554
No 280
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.68 E-value=3.9e-17 Score=162.43 Aligned_cols=134 Identities=17% Similarity=0.149 Sum_probs=121.0
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccccc
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLN 149 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 149 (613)
+++.|+|++|++++..+..|.++++|+.|+|++|.+++..+..|.++++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 69999999999998877799999999999999999997777789999999999999999998888899999999999999
Q ss_pred CccccCccccccccccchhhhhhcCCCcccC--CCCCCCCCccccccccCCCCCCC
Q 007200 150 NNSLMGEIPRSLTNVNSLQVLDLSNNKLTGD--IPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 150 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
+|++++..+..+..+++|+.|++++|.+++. +.....+++|+.|++++|.+...
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~ 164 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcC
Confidence 9999977777899999999999999999873 34457889999999999988764
No 281
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.68 E-value=2.6e-17 Score=168.22 Aligned_cols=140 Identities=15% Similarity=0.109 Sum_probs=101.7
Q ss_pred CCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCc-------------ccHH--------HHHHHHHHHhhcccCcc
Q 007200 289 NFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQ-------------GGEL--------QFQTEVEMISMAVHRNL 347 (613)
Q Consensus 289 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~-------------~~~~--------~~~~e~~~l~~l~h~ni 347 (613)
-|++.+.||+|++|.||+|...+|+.||||+++..... .... ...+|...+.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 48889999999999999999989999999987632110 0011 12345666666655443
Q ss_pred ceeeEEEEcCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecC
Q 007200 348 LRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDE 427 (613)
Q Consensus 348 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~ 427 (613)
.-..-+.. ...++||||+.|++|..+... .....++.|++.+|.|||+. |||||||||.|||+++
T Consensus 176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~~----------~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSSV----------PDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp SCCCEEEE--ETTEEEEECCSCEEGGGCCCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCeeeec--cCceEEEEecCCccHhhhccc----------HHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 22211111 234799999999988765421 12456789999999999999 9999999999999998
Q ss_pred CC----------cEEEeccccceecC
Q 007200 428 EF----------EAVVGDFGLAKLMD 443 (613)
Q Consensus 428 ~~----------~~kl~DfGla~~~~ 443 (613)
++ .+.|+||+-+....
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTCEETT
T ss_pred CCCcccccccccceEEEEeCCcccCC
Confidence 76 38999999876543
No 282
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.67 E-value=6e-17 Score=173.11 Aligned_cols=137 Identities=24% Similarity=0.269 Sum_probs=128.5
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.+++..+..+.++++|+.|+|++|.|++..|..|..+++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 47999999999999999999999999999999999999888989999999999999999999888899999999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~~ 205 (613)
++|++++..|..+..+++|+.|+|++|+|++.++.. ..+++|+.|++++|++.|..+
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 999999888999999999999999999999988765 788999999999999998765
No 283
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.67 E-value=2.1e-16 Score=156.76 Aligned_cols=138 Identities=24% Similarity=0.224 Sum_probs=124.9
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|.+++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|.++++|++|+
T Consensus 84 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 163 (272)
T 3rfs_A 84 LTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELD 163 (272)
T ss_dssp CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEE
Confidence 46899999999999988888899999999999999999988888899999999999999999987788889999999999
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~~ 205 (613)
|++|++++..+..+..+++|+.|++++|+|++.++.. ..+++|+.|++++|++.|..+
T Consensus 164 l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 164 LSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 9999999877778899999999999999999988764 778999999999999987643
No 284
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.67 E-value=1.2e-16 Score=149.66 Aligned_cols=124 Identities=26% Similarity=0.375 Sum_probs=111.9
Q ss_pred CccceeEEeCCC----------CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccC
Q 007200 57 PCTWFHVTCNSE----------NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYL 126 (613)
Q Consensus 57 ~C~~~gv~c~~~----------~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~ 126 (613)
.|.|..+.|+.. .+++.|+|++|.|+ .+|..|.++++|+.|+|++|.|++..+..|.++++|++|+|++
T Consensus 9 ~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 9 TCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 357778888642 37999999999999 6778999999999999999999988888999999999999999
Q ss_pred ccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCC
Q 007200 127 NNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDI 181 (613)
Q Consensus 127 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 181 (613)
|+|++..|..|..+++|++|+|++|+|+...+..|..+++|+.|+|++|++.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 9999888889999999999999999999766678999999999999999998653
No 285
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.66 E-value=7.3e-17 Score=172.46 Aligned_cols=152 Identities=19% Similarity=0.284 Sum_probs=132.8
Q ss_pred CCCcccee--EEeCCC---------CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCC-ccccccCCcCCeE
Q 007200 55 VNPCTWFH--VTCNSE---------NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKV-PEELGNLTNLVSL 122 (613)
Q Consensus 55 ~~~C~~~g--v~c~~~---------~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~-p~~~~~l~~L~~L 122 (613)
...|.|.+ |.|... .+++.|+|++|.+++..+..|.++++|++|+|++|.+.+.+ +..|.++++|++|
T Consensus 5 ~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 5 TSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp --CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred cceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEE
Confidence 34576666 888642 47999999999999888999999999999999999998655 5679999999999
Q ss_pred eccCccCCCCCCcccccccccccccccCccccCccccc--cccccchhhhhhcCCCcccCCCC--CCCCCccccccccCC
Q 007200 123 DLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRS--LTNVNSLQVLDLSNNKLTGDIPT--NGSFSLFTPISFANN 198 (613)
Q Consensus 123 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~l~~N~l~~~~~~--~~~~~~l~~l~l~~N 198 (613)
+|++|++++..|..|.++++|++|+|++|++++.++.. +..+++|+.|+|++|.+++..+. ...+++|+.|++++|
T Consensus 85 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n 164 (455)
T 3v47_A 85 KLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFN 164 (455)
T ss_dssp ECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTC
T ss_pred eCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCC
Confidence 99999999888999999999999999999999766554 89999999999999999998665 478899999999999
Q ss_pred CCCCCCCC
Q 007200 199 QLNNPPPS 206 (613)
Q Consensus 199 ~i~~~~~~ 206 (613)
.+....+.
T Consensus 165 ~l~~~~~~ 172 (455)
T 3v47_A 165 KVKSICEE 172 (455)
T ss_dssp CBSCCCTT
T ss_pred cccccChh
Confidence 99876543
No 286
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.66 E-value=1.1e-16 Score=177.46 Aligned_cols=152 Identities=18% Similarity=0.213 Sum_probs=133.8
Q ss_pred CCCccce----eEEeCC----------CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCC
Q 007200 55 VNPCTWF----HVTCNS----------ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLV 120 (613)
Q Consensus 55 ~~~C~~~----gv~c~~----------~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~ 120 (613)
.+||.+. .|.|.. ..+++.|+|++|.+++..+..|.++++|++|+|++|.|++..|..|.++++|+
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 4567663 588854 24799999999999988888999999999999999999988899999999999
Q ss_pred eEeccCccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCccc--CCCCCCCCCccccccccCC
Q 007200 121 SLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTG--DIPTNGSFSLFTPISFANN 198 (613)
Q Consensus 121 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~~~~~~l~~l~l~~N 198 (613)
+|+|++|.|++..|..|+++++|++|+|++|++++..+..+..+++|+.|++++|.+++ .+.....+++|+.|++++|
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 99999999998889999999999999999999997777889999999999999999986 3445688999999999999
Q ss_pred CCCCCCCC
Q 007200 199 QLNNPPPS 206 (613)
Q Consensus 199 ~i~~~~~~ 206 (613)
.+...++.
T Consensus 164 ~l~~~~~~ 171 (606)
T 3vq2_A 164 YIQTITVN 171 (606)
T ss_dssp CCCEECTT
T ss_pred cceecChh
Confidence 98876543
No 287
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.66 E-value=1.3e-16 Score=159.37 Aligned_cols=137 Identities=24% Similarity=0.233 Sum_probs=122.8
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCcc-CCCCCCccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNN-LNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ 147 (613)
.+++.|+|++|.+++..+..|.++++|++|+|++|.|++..|..|..+++|++|+|++|. ++...|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 479999999999998877889999999999999999998888899999999999999997 8876688999999999999
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
|++|++++..|..+..+++|+.|++++|.+++.++. ...+++|+.|++++|.+...++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 999999988788899999999999999999988776 4778999999999998876543
No 288
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=3.4e-17 Score=146.71 Aligned_cols=127 Identities=21% Similarity=0.265 Sum_probs=114.3
Q ss_pred CCeEEEEcCCCCcc-cccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 69 NSVTRVDLGNANLS-GQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 69 ~~l~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
.+++.|++++|+++ +.+|..+..+++|+.|+|++|.|++. ..+..+++|++|+|++|.|++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 57999999999998 78888899999999999999999965 6799999999999999999987898898999999999
Q ss_pred ccCccccCc-cccccccccchhhhhhcCCCcccCCC----CCCCCCccccccccC
Q 007200 148 LNNNSLMGE-IPRSLTNVNSLQVLDLSNNKLTGDIP----TNGSFSLFTPISFAN 197 (613)
Q Consensus 148 L~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~~~l~~l~l~~ 197 (613)
|++|++++. .+..+..+++|+.|++++|++++.++ ....+++|+.|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999964 34789999999999999999998876 346788899988764
No 289
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=1.8e-16 Score=146.47 Aligned_cols=115 Identities=28% Similarity=0.287 Sum_probs=105.2
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 27 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 106 (177)
T 2o6r_A 27 PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELA 106 (177)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEE
Confidence 35899999999999987778899999999999999999977777789999999999999999988778899999999999
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIP 182 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 182 (613)
|++|+|++..+..+..+++|+.|+|++|++.+..+
T Consensus 107 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 107 LDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99999997666677899999999999999998765
No 290
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.65 E-value=1.3e-16 Score=162.77 Aligned_cols=136 Identities=21% Similarity=0.319 Sum_probs=122.1
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccc--------
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGK-------- 139 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-------- 139 (613)
..+++.|+|++|.++ .+|..+.++++|++|+|++|.|+ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~ 180 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQ 180 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEE
T ss_pred CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhc
Confidence 357999999999999 78888999999999999999999 78888999999999999999988889887765
Q ss_pred -ccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCCCC
Q 007200 140 -LSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPPPS 206 (613)
Q Consensus 140 -l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~~~ 206 (613)
+++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+++.++....+++|+.|++++|.+....+.
T Consensus 181 ~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~ 247 (328)
T 4fcg_A 181 GLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPP 247 (328)
T ss_dssp ESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCC
T ss_pred cCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHH
Confidence 999999999999999 888889999999999999999998887778889999999999988876554
No 291
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.65 E-value=4.2e-16 Score=155.70 Aligned_cols=138 Identities=20% Similarity=0.222 Sum_probs=120.7
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEccccc-CCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNN-ISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~-i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
..+++.|+|++|.+++..+..|.++++|++|+|++|. ++...|..|..+++|++|+|++|++++..|..|.++++|++|
T Consensus 55 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 134 (285)
T 1ozn_A 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYL 134 (285)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEE
Confidence 4589999999999998888899999999999999997 876668889999999999999999998888889999999999
Q ss_pred cccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCCC
Q 007200 147 RLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 147 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
+|++|++++..+..+..+++|+.|+|++|.|++.++. ...+++|+.|++++|.+....+
T Consensus 135 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 194 (285)
T 1ozn_A 135 YLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHP 194 (285)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred ECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCH
Confidence 9999999977677788999999999999999987775 4778899999999998876543
No 292
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.64 E-value=4.5e-16 Score=155.81 Aligned_cols=135 Identities=27% Similarity=0.255 Sum_probs=116.8
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.|++..+..|.++++|+.|+|++|.|++. +. ...+++|++|+|++|+|+ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 4789999999999988888899999999999999999854 43 378899999999999998 67888889999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPPPS 206 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~~~ 206 (613)
++|+|++..+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|.+...++.
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 166 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAG 166 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTT
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHH
Confidence 999999777788999999999999999999887765 6788999999999998876553
No 293
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.64 E-value=4.3e-16 Score=150.33 Aligned_cols=140 Identities=26% Similarity=0.246 Sum_probs=122.9
Q ss_pred cceeEEeCCCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccc
Q 007200 59 TWFHVTCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLG 138 (613)
Q Consensus 59 ~~~gv~c~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 138 (613)
.+....|+. +.+++++++++ .+|..+ .++|+.|+|++|+|++..|..|..+++|++|+|++|+|+...+..|.
T Consensus 13 ~~~~~~Cs~----~~v~c~~~~l~-~ip~~~--~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~ 85 (229)
T 3e6j_A 13 CPSQCSCSG----TTVDCRSKRHA-SVPAGI--PTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFD 85 (229)
T ss_dssp CCTTCEEET----TEEECTTSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTT
T ss_pred CCCCCEEeC----CEeEccCCCcC-ccCCCC--CCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcc
Confidence 344567853 57999999998 455544 38999999999999998899999999999999999999977677889
Q ss_pred cccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCCC
Q 007200 139 KLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 139 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
.+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+..+.....+++|+.|++++|.+...++
T Consensus 86 ~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 86 SLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp TCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred cCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCH
Confidence 9999999999999999777778899999999999999999887777889999999999999987654
No 294
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.1e-16 Score=165.10 Aligned_cols=150 Identities=24% Similarity=0.262 Sum_probs=127.6
Q ss_pred CCCccceeE-EeCC----------CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEe
Q 007200 55 VNPCTWFHV-TCNS----------ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLD 123 (613)
Q Consensus 55 ~~~C~~~gv-~c~~----------~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~ 123 (613)
..+|.|.|+ .|+. ..+++.|+|++|++++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+
T Consensus 27 ~~~C~~~~~c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (353)
T 2z80_A 27 SLSCDRNGICKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLD 106 (353)
T ss_dssp CCEECTTSEEECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCCCeEeeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEE
Confidence 456888776 2221 23799999999999987777999999999999999999988888999999999999
Q ss_pred ccCccCCCCCCcccccccccccccccCccccCccc-cccccccchhhhhhcCC-CcccCCCC-CCCCCccccccccCCCC
Q 007200 124 LYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIP-RSLTNVNSLQVLDLSNN-KLTGDIPT-NGSFSLFTPISFANNQL 200 (613)
Q Consensus 124 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N-~l~~~~~~-~~~~~~l~~l~l~~N~i 200 (613)
|++|+|++..+..|.++++|++|+|++|++++..+ ..+..+++|+.|++++| .+.+.++. ...+++|+.|++++|.+
T Consensus 107 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 107 LSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp CCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc
Confidence 99999996655669999999999999999995444 47899999999999999 57776554 47889999999999998
Q ss_pred CCCC
Q 007200 201 NNPP 204 (613)
Q Consensus 201 ~~~~ 204 (613)
....
T Consensus 187 ~~~~ 190 (353)
T 2z80_A 187 QSYE 190 (353)
T ss_dssp CEEC
T ss_pred CccC
Confidence 7653
No 295
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.64 E-value=6.9e-17 Score=181.91 Aligned_cols=175 Identities=18% Similarity=0.150 Sum_probs=108.4
Q ss_pred CchHHHHHHHHHHhcC-CCCCCCCCCCCCCCCCccceeEEeCCCCCeEE------------------EEcCCCCccc---
Q 007200 26 SNAEGDALNALKTNLA-DPNNVLQSWDATLVNPCTWFHVTCNSENSVTR------------------VDLGNANLSG--- 83 (613)
Q Consensus 26 ~~~~~~~l~~~k~~~~-~~~~~~~~w~~~~~~~C~~~gv~c~~~~~l~~------------------L~l~~n~l~~--- 83 (613)
.+.++++|+++...+. .....-.+|.......+.|.++.++. ++++. ++|++|.|.+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~ 208 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST-PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDD 208 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC-CccceEEeeCCCCCcchhhHhhcCccCcccccCccc
Confidence 3467789999987664 22233446755555566787766644 23333 3344444332
Q ss_pred ------ccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCcc
Q 007200 84 ------QLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEI 157 (613)
Q Consensus 84 ------~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 157 (613)
..+..+..++.|+.|+|++|.|. .+|..+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+
T Consensus 209 ~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~l 285 (727)
T 4b8c_D 209 IENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SL 285 (727)
T ss_dssp -------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SC
T ss_pred cccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-cc
Confidence 23566788888999999999988 67777778999999999999998 78888899999999999999998 77
Q ss_pred ccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 158 PRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 158 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
|..|..|++|+.|+|++|.|+.++..++.+++|+.|++++|.+.+.+
T Consensus 286 p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~ 332 (727)
T 4b8c_D 286 PAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQF 332 (727)
T ss_dssp CSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCCCSHH
T ss_pred ChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCccCCCC
Confidence 88888999999999999999877777788889999999999887643
No 296
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.64 E-value=4.5e-16 Score=149.14 Aligned_cols=142 Identities=22% Similarity=0.265 Sum_probs=123.6
Q ss_pred CccceeEEeCCCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcc
Q 007200 57 PCTWFHVTCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTT 136 (613)
Q Consensus 57 ~C~~~gv~c~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 136 (613)
.|.- +.+|.. +.+++++++++ .+|..+. ++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..
T Consensus 4 ~CP~-~C~C~~----~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~ 75 (220)
T 2v9t_B 4 HCPA-ACTCSN----NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDA 75 (220)
T ss_dssp CSCT-TSEEET----TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTT
T ss_pred CCCC-CCEECC----CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHH
Confidence 4543 577863 57999999999 4555443 78999999999999877788999999999999999999888999
Q ss_pred cccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCCCC
Q 007200 137 LGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPPPS 206 (613)
Q Consensus 137 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~~~ 206 (613)
|.++++|++|+|++|+|+...+..|..+++|+.|+|++|+|++.++.. ..+++|+.|++++|.+...++.
T Consensus 76 ~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 146 (220)
T 2v9t_B 76 FQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKG 146 (220)
T ss_dssp TTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred hhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHH
Confidence 999999999999999999666667899999999999999999987654 7889999999999999887653
No 297
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.64 E-value=2.6e-16 Score=174.07 Aligned_cols=136 Identities=18% Similarity=0.179 Sum_probs=122.9
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|++++|.++...+..|.++++|+.|+|++|.|++..|..|..+++|++|+|++|.|++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 46789999999999777778899999999999999999888889999999999999999999888888999999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~ 204 (613)
++|.|++..+..|.++++|+.|+|++|.|++.++. ...+++|+.|++++|.+...+
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 187 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD 187 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC
Confidence 99999966666679999999999999999998875 478899999999999987754
No 298
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.64 E-value=1.2e-16 Score=174.96 Aligned_cols=148 Identities=23% Similarity=0.271 Sum_probs=130.1
Q ss_pred CccceeEEeCC------------CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEec
Q 007200 57 PCTWFHVTCNS------------ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDL 124 (613)
Q Consensus 57 ~C~~~gv~c~~------------~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~L 124 (613)
.|.|.|+ |+. ..+++.|+|++|++++..+..|.++++|++|+|++|+|++..|+.|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4889887 742 137999999999999888899999999999999999999888899999999999999
Q ss_pred cCccCCCCCCcccccccccccccccCccccC-ccccccccccchhhhhhcCCCc-ccCCC-CCCCCCccccccccCCCCC
Q 007200 125 YLNNLNGPIPTTLGKLSKLRFLRLNNNSLMG-EIPRSLTNVNSLQVLDLSNNKL-TGDIP-TNGSFSLFTPISFANNQLN 201 (613)
Q Consensus 125 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l-~~~~~-~~~~~~~l~~l~l~~N~i~ 201 (613)
++|++++..|..|+++++|++|+|++|++++ ..|..+.++++|+.|++++|.+ ...++ ....+++|+.|++++|.+.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999998878889999999999999999986 3577899999999999999994 44443 4578999999999999988
Q ss_pred CCCC
Q 007200 202 NPPP 205 (613)
Q Consensus 202 ~~~~ 205 (613)
...+
T Consensus 162 ~~~~ 165 (549)
T 2z81_A 162 NYQS 165 (549)
T ss_dssp EECT
T ss_pred ccCh
Confidence 7543
No 299
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.63 E-value=3.7e-16 Score=168.07 Aligned_cols=146 Identities=21% Similarity=0.263 Sum_probs=130.0
Q ss_pred cceeEEeCC----------CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCcc
Q 007200 59 TWFHVTCNS----------ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNN 128 (613)
Q Consensus 59 ~~~gv~c~~----------~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~ 128 (613)
.|..|.|.. ..+++.|+|++|+|++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 356788854 2378999999999998888999999999999999999998889999999999999999999
Q ss_pred CCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCC
Q 007200 129 LNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 129 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~ 204 (613)
|+...+..|.++++|++|+|++|++++..+..|..+++|+.|+|++|.+++..+. ...+++|+.|++++|.+...+
T Consensus 92 l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 168 (477)
T 2id5_A 92 LKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIP 168 (477)
T ss_dssp CCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCC
T ss_pred CCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccC
Confidence 9976667789999999999999999988888999999999999999999987664 477899999999999887654
No 300
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.63 E-value=3.2e-16 Score=150.15 Aligned_cols=116 Identities=18% Similarity=0.232 Sum_probs=109.1
Q ss_pred CCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 67 SENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
...+++.|+|++|.|++..+..|.++++|+.|+|++|.|++..+..|..+++|++|+|++|+|++..|..|..+++|++|
T Consensus 55 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 134 (220)
T 2v70_A 55 KLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLL 134 (220)
T ss_dssp GCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEE
T ss_pred cCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEE
Confidence 34689999999999998888899999999999999999998888889999999999999999999889999999999999
Q ss_pred cccCccccCccccccccccchhhhhhcCCCcccCCC
Q 007200 147 RLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIP 182 (613)
Q Consensus 147 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 182 (613)
+|++|+|++..|..|..+++|+.|+|++|++++..+
T Consensus 135 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 135 SLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp ECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 999999998889999999999999999999997644
No 301
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.63 E-value=2.6e-16 Score=152.97 Aligned_cols=140 Identities=22% Similarity=0.279 Sum_probs=123.4
Q ss_pred EEeCC-------CCCeEEEEcCCCCcccccchhhhCCCCCCEEEccccc-CCCCCccccccCCcCCeEeccC-ccCCCCC
Q 007200 63 VTCNS-------ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNN-ISGKVPEELGNLTNLVSLDLYL-NNLNGPI 133 (613)
Q Consensus 63 v~c~~-------~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~-i~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~ 133 (613)
|.|.. ..+++.|+|++|++++..+..|.++++|+.|+|++|. +++..+..|.++++|++|+|++ |+|++..
T Consensus 18 v~c~~l~~ip~~~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~ 97 (239)
T 2xwt_C 18 VTCKDIQRIPSLPPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID 97 (239)
T ss_dssp EEECSCSSCCCCCTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC
T ss_pred eEccCccccCCCCCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC
Confidence 66864 3479999999999998888899999999999999997 8877777899999999999999 9999777
Q ss_pred CcccccccccccccccCccccCccccccccccchh---hhhhcCC-CcccCCCC-CCCCCccc-cccccCCCCCCCC
Q 007200 134 PTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQ---VLDLSNN-KLTGDIPT-NGSFSLFT-PISFANNQLNNPP 204 (613)
Q Consensus 134 p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~---~L~l~~N-~l~~~~~~-~~~~~~l~-~l~l~~N~i~~~~ 204 (613)
+..|.++++|++|+|++|++++ +|. +..+++|+ .|++++| .+++.++. ...+++|+ .|++++|.+...+
T Consensus 98 ~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~ 172 (239)
T 2xwt_C 98 PDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQ 172 (239)
T ss_dssp TTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEEC
T ss_pred HHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccC
Confidence 7889999999999999999995 666 88888888 9999999 99988876 47789999 9999999887543
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.63 E-value=2.3e-16 Score=159.35 Aligned_cols=140 Identities=21% Similarity=0.285 Sum_probs=125.2
Q ss_pred CCCCeEEEEcCCCCcccccc-hhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCC-CCCcccccccccc
Q 007200 67 SENSVTRVDLGNANLSGQLV-SQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNG-PIPTTLGKLSKLR 144 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~ 144 (613)
...+++.|+|++|.+++..+ ..+.++++|+.|+|++|.+++..+..|..+++|++|+|++|.+++ .+|..+..+++|+
T Consensus 99 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 178 (306)
T 2z66_A 99 GLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLT 178 (306)
T ss_dssp TCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCC
T ss_pred CCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCC
Confidence 45789999999999997665 678999999999999999998888889999999999999999986 5788999999999
Q ss_pred cccccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCCCC
Q 007200 145 FLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPPPS 206 (613)
Q Consensus 145 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~~~ 206 (613)
+|+|++|++++..|..+..+++|+.|+|++|.+++.++. ...+++|+.|++++|.+...++.
T Consensus 179 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 241 (306)
T 2z66_A 179 FLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 241 (306)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSS
T ss_pred EEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHH
Confidence 999999999988788999999999999999999987764 47789999999999999876553
No 303
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.63 E-value=7e-16 Score=164.16 Aligned_cols=145 Identities=24% Similarity=0.277 Sum_probs=123.4
Q ss_pred ceeEEeCC----------CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccC
Q 007200 60 WFHVTCNS----------ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNL 129 (613)
Q Consensus 60 ~~gv~c~~----------~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l 129 (613)
+..|.|.. ..+++.|+|++|+|++..+..|.++++|+.|+|++|.|++..+..|.++++|++|+|++|+|
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 45788854 24689999999999988889999999999999999999988888999999999999999999
Q ss_pred CCCCCcccccccccccccccCccccCccccccccccchhhhhhcC-CCcccCCCC-CCCCCccccccccCCCCCCCC
Q 007200 130 NGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSN-NKLTGDIPT-NGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 130 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~ 204 (613)
+...+..|..+++|++|+|++|+|+...+..|..+++|+.|+|++ |.+...++. ...+++|+.|++++|.+...+
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 201 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP 201 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSCC
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcccc
Confidence 977777899999999999999999977677888899999999988 445544443 367888888999988887543
No 304
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.63 E-value=4.1e-16 Score=148.06 Aligned_cols=134 Identities=25% Similarity=0.245 Sum_probs=120.2
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..|.++++|++|+
T Consensus 51 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 130 (208)
T 2o6s_A 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLR 130 (208)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEE
Confidence 46899999999999987777889999999999999999977777789999999999999999987777899999999999
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPPPSP 207 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~~~~ 207 (613)
|++|++++..+..+..+++|+.|++++|++.+. ++.|+.|+++.|.+.+..|..
T Consensus 131 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~------~~~l~~L~~~~n~~~g~ip~~ 184 (208)
T 2o6s_A 131 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT------CPGIRYLSEWINKHSGVVRNS 184 (208)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC------TTTTHHHHHHHHHCTTTBBCT
T ss_pred CCCCccceeCHHHhccCCCccEEEecCCCeecC------CCCHHHHHHHHHhCCceeecc
Confidence 999999977777789999999999999998864 457899999999999877643
No 305
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.62 E-value=4.2e-16 Score=163.12 Aligned_cols=135 Identities=18% Similarity=0.182 Sum_probs=121.8
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|++++|.++...+..+.++++|+.|+|++|.|++..+..|..+++|++|+|++|.+++..|..|.++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 47899999999999766677899999999999999999877889999999999999999999888889999999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~ 203 (613)
++|+++...+..|..+++|+.|++++|.+++.++. ...+++|+.|++++|.+...
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 180 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 180 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc
Confidence 99999955555578999999999999999988776 47889999999999998765
No 306
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.62 E-value=1.3e-16 Score=165.22 Aligned_cols=137 Identities=23% Similarity=0.214 Sum_probs=119.6
Q ss_pred CCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 67 SENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
...+++.|+|++|+|++..+..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|
T Consensus 62 ~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L 141 (361)
T 2xot_A 62 RLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKL 141 (361)
T ss_dssp CCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred cccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEE
Confidence 44689999999999998888899999999999999999998778889999999999999999998889999999999999
Q ss_pred cccCccccCcccccc---ccccchhhhhhcCCCcccCCCCC-CCCCc--cccccccCCCCCCC
Q 007200 147 RLNNNSLMGEIPRSL---TNVNSLQVLDLSNNKLTGDIPTN-GSFSL--FTPISFANNQLNNP 203 (613)
Q Consensus 147 ~L~~N~l~~~~~~~~---~~l~~L~~L~l~~N~l~~~~~~~-~~~~~--l~~l~l~~N~i~~~ 203 (613)
+|++|+|++..+..| ..+++|+.|+|++|+|++.+... ..++. ++.|++++|++.|.
T Consensus 142 ~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 142 YLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp ECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred ECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 999999996555555 57999999999999999876532 44554 47899999999885
No 307
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.62 E-value=7.8e-16 Score=164.36 Aligned_cols=145 Identities=23% Similarity=0.251 Sum_probs=126.8
Q ss_pred ceeEEeCCC----------CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccC
Q 007200 60 WFHVTCNSE----------NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNL 129 (613)
Q Consensus 60 ~~gv~c~~~----------~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l 129 (613)
|..|.|... .+++.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 467888542 4799999999999998899999999999999999999988889999999999999999999
Q ss_pred CCCCCcccccccccccccccCccccCccccccccccchhhhhhcC-CCcccCCCC-CCCCCccccccccCCCCCCCC
Q 007200 130 NGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSN-NKLTGDIPT-NGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 130 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~ 204 (613)
++..+..|.++++|++|+|++|+|+...+..|..+++|+.|+|++ |.+...++. ...+++|+.|++++|.+...+
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~ 212 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMP 212 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSCC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccccc
Confidence 977777899999999999999999977677889999999999998 556555543 467889999999999887653
No 308
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.61 E-value=5.4e-16 Score=172.03 Aligned_cols=137 Identities=20% Similarity=0.171 Sum_probs=126.2
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
..++.|+|++|.|++..+..|.++++|++|+|++|.+++..|+.|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 47999999999999888999999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCC-CCCCCCCccccccccCCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDI-PTNGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
++|++++..+..+.++++|++|++++|.+++.. +....+++|+.|++++|.+...++
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 170 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSK 170 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECH
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccCh
Confidence 999999777888999999999999999999853 555668999999999999876543
No 309
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.60 E-value=1.6e-15 Score=150.69 Aligned_cols=113 Identities=24% Similarity=0.289 Sum_probs=64.9
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.+++..+..|.++++|+.|+|++|.+++..+..|.++++|++|+|++|.+++..+..+.++++|++|+|
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 35666666666665555555666666666666666665555555555666666666666655544445555556666666
Q ss_pred cCccccCc-cccccccccchhhhhhcCCCcccCC
Q 007200 149 NNNSLMGE-IPRSLTNVNSLQVLDLSNNKLTGDI 181 (613)
Q Consensus 149 ~~N~l~~~-~~~~~~~l~~L~~L~l~~N~l~~~~ 181 (613)
++|++++. +|..+..+++|+.|+|++|+|++.+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~ 165 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEEC
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCC
Confidence 66655542 3555555555555555555555443
No 310
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.60 E-value=5.5e-16 Score=145.85 Aligned_cols=130 Identities=18% Similarity=0.269 Sum_probs=83.5
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|++++|+++ .++ .+..+++|+.|+|++|.++ .+ ..+..+++|++|+|++|++++..+..|+.+++|++|+|
T Consensus 44 ~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~-~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~L 119 (197)
T 4ezg_A 44 NSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NY-NPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDI 119 (197)
T ss_dssp HTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CC-GGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEEC
T ss_pred CCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cc-hhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEe
Confidence 35666777777766 333 4666677777777777554 22 34666677777777777776656666666777777777
Q ss_pred cCccccCccccccccccchhhhhhcCCC-cccCCCCCCCCCccccccccCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNK-LTGDIPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
++|++++..+..+..+++|+.|++++|. ++.. +....+++|+.|++++|.+...
T Consensus 120 s~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~-~~l~~l~~L~~L~l~~n~i~~~ 174 (197)
T 4ezg_A 120 SHSAHDDSILTKINTLPKVNSIDLSYNGAITDI-MPLKTLPELKSLNIQFDGVHDY 174 (197)
T ss_dssp CSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCC-GGGGGCSSCCEEECTTBCCCCC
T ss_pred cCCccCcHhHHHHhhCCCCCEEEccCCCCcccc-HhhcCCCCCCEEECCCCCCcCh
Confidence 7777766566666666777777777776 4433 3445566667777777666553
No 311
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.60 E-value=7e-16 Score=155.76 Aligned_cols=137 Identities=23% Similarity=0.298 Sum_probs=123.1
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCc-cccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVP-EELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
..+++.|+|++|.++ .++..+.++++|+.|+|++|.+++..+ ..+..+++|++|+|++|.+++..+..|..+++|++|
T Consensus 77 ~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 468999999999998 466679999999999999999996655 579999999999999999998889999999999999
Q ss_pred cccCccccC-ccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCCC
Q 007200 147 RLNNNSLMG-EIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 147 ~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
+|++|.+++ .+|..+..+++|+.|+|++|.|++.++. ...+++|+.|++++|.+...++
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 216 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 216 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCS
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccCh
Confidence 999999986 5788999999999999999999988664 4788999999999999987654
No 312
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.60 E-value=1.7e-15 Score=170.38 Aligned_cols=137 Identities=23% Similarity=0.235 Sum_probs=121.5
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 47999999999999888888999999999999999999888999999999999999999999665667999999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~~ 205 (613)
++|++++..|..|.++++|+.|+|++|.+++.++.. ..+++|+.|++++|.+...++
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 162 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKS 162 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCH
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCH
Confidence 999999777788999999999999999999877654 678899999999998876543
No 313
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.60 E-value=6.2e-16 Score=171.55 Aligned_cols=135 Identities=19% Similarity=0.237 Sum_probs=89.0
Q ss_pred CCeEEEEcCCCCcccccc-hhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCC-CCCcccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLV-SQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNG-PIPTTLGKLSKLRFL 146 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L 146 (613)
.+++.|+|++|.+++..+ ..+.++++|+.|+|++|.+++..|..|..+++|++|+|++|.+++ .+|..|..+++|++|
T Consensus 399 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 478 (606)
T 3vq2_A 399 EELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFL 478 (606)
T ss_dssp TTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEE
Confidence 466777777777766555 466666777777777777666666666666677777777776665 356666666677777
Q ss_pred cccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCC
Q 007200 147 RLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 147 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~ 203 (613)
+|++|++++..|..+..+++|+.|+|++|++++.++. ...+++|+.|++++|.+...
T Consensus 479 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 536 (606)
T 3vq2_A 479 DLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETS 536 (606)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCE
T ss_pred ECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCccc
Confidence 7777766666666666666666777776666665443 35566666666666666643
No 314
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.59 E-value=8.3e-16 Score=176.93 Aligned_cols=146 Identities=27% Similarity=0.270 Sum_probs=125.2
Q ss_pred ccceeEEeCCCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCC-ccccccCCcCCeEeccCccCCCCCCcc
Q 007200 58 CTWFHVTCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKV-PEELGNLTNLVSLDLYLNNLNGPIPTT 136 (613)
Q Consensus 58 C~~~gv~c~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 136 (613)
|.|..|.+ ..++++.|+|++|.|++..+..|.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.|++..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 45666666 5578999999999999888899999999999999999666555 788999999999999999999888999
Q ss_pred cccccccccccccCccccCccccc--cccccchhhhhhcCCCcccCCC--CCCCCCccccccccCCCCCCCC
Q 007200 137 LGKLSKLRFLRLNNNSLMGEIPRS--LTNVNSLQVLDLSNNKLTGDIP--TNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 137 ~~~l~~L~~L~L~~N~l~~~~~~~--~~~l~~L~~L~l~~N~l~~~~~--~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
|.++++|++|+|++|.+++.+|.. +.++++|+.|+|++|.+++..+ ....+++|+.|++++|.+....
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 999999999999999999766664 8899999999999999988754 3478889999999999887654
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.59 E-value=1.2e-15 Score=154.99 Aligned_cols=130 Identities=27% Similarity=0.189 Sum_probs=89.2
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccc-ccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLG-KLSKLRFLR 147 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ 147 (613)
.+++.|++++|.+++..+. .+++|+.|+|++|++++..+..+..+++|++|+|++|.|++..+..+. .+++|++|+
T Consensus 99 ~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~ 175 (317)
T 3o53_A 99 PSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (317)
T ss_dssp TTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEE
Confidence 4667777777777655443 256677777777777766666677777777777777777766566553 577777777
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
|++|+|++. +. ...+++|+.|+|++|+|++.++....+++|+.|++++|.+...
T Consensus 176 L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~l 229 (317)
T 3o53_A 176 LQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLI 229 (317)
T ss_dssp CTTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEE
T ss_pred CCCCcCccc-cc-ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccch
Confidence 777777743 32 2346777777777777777666666667777777777777643
No 316
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.58 E-value=2.6e-15 Score=138.13 Aligned_cols=110 Identities=28% Similarity=0.278 Sum_probs=97.3
Q ss_pred EEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCc
Q 007200 72 TRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNN 151 (613)
Q Consensus 72 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 151 (613)
+.+++++|+|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 5666553 89999999999999888999999999999999999999776777899999999999999
Q ss_pred cccCccccccccccchhhhhhcCCCcccCCCCC
Q 007200 152 SLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN 184 (613)
Q Consensus 152 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 184 (613)
+|++..+..|..+++|+.|+|++|+|.+.+...
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~~ 124 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRDI 124 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccccH
Confidence 999766667999999999999999999776543
No 317
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.58 E-value=1.4e-15 Score=143.05 Aligned_cols=130 Identities=17% Similarity=0.297 Sum_probs=113.8
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|++++|.++. +..+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..|..+..+++|++|+
T Consensus 65 l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~ 142 (197)
T 4ezg_A 65 AHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSID 142 (197)
T ss_dssp CTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEE
T ss_pred CCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEE
Confidence 3589999999998763 34789999999999999999987888899999999999999999988889999999999999
Q ss_pred ccCcc-ccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCC
Q 007200 148 LNNNS-LMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNN 202 (613)
Q Consensus 148 L~~N~-l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~ 202 (613)
|++|+ ++ .+| .+..+++|+.|++++|+|++.+ ....+++|+.|++++|++..
T Consensus 143 L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 143 LSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCT-TGGGCSSCCEEEECBC----
T ss_pred ccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChH-HhccCCCCCEEEeeCcccCC
Confidence 99998 66 555 6899999999999999999865 56788999999999998753
No 318
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.58 E-value=5.2e-15 Score=151.24 Aligned_cols=144 Identities=23% Similarity=0.313 Sum_probs=124.4
Q ss_pred ccceeEEeCCC----------CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCc
Q 007200 58 CTWFHVTCNSE----------NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLN 127 (613)
Q Consensus 58 C~~~gv~c~~~----------~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N 127 (613)
|.|..+.|... .+++.|+|++|.+++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 68999999642 37999999999999888889999999999999999999888999999999999999999
Q ss_pred cCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCccc--CCCCC-CCCCccccccccCCCCCCCC
Q 007200 128 NLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTG--DIPTN-GSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 128 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~~~-~~~~~l~~l~l~~N~i~~~~ 204 (613)
+++ .+|..+. ++|++|+|++|++++..+..+..+++|+.|++++|.++. ..+.. ..+ +|+.|++++|.+...+
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~l~ 188 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIP 188 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSSCC
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCccC
Confidence 999 5666655 899999999999997777779999999999999999974 44433 444 8999999999988754
Q ss_pred C
Q 007200 205 P 205 (613)
Q Consensus 205 ~ 205 (613)
.
T Consensus 189 ~ 189 (332)
T 2ft3_A 189 K 189 (332)
T ss_dssp S
T ss_pred c
Confidence 3
No 319
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.58 E-value=1.7e-15 Score=168.60 Aligned_cols=136 Identities=24% Similarity=0.324 Sum_probs=118.6
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCC-CCCccccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNIS-GKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
...++.++++.|.+++..+..+..++.|+.|+|++|.+. +.+|+.|..+++|++|+|++|+|++..|..|.++++|++|
T Consensus 444 l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L 523 (635)
T 4g8a_A 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVL 523 (635)
T ss_dssp CTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred ccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEE
Confidence 346788899999998888888899999999999998744 4578889999999999999999998888999999999999
Q ss_pred cccCccccCccccccccccchhhhhhcCCCcccCCCCC-CCC-CccccccccCCCCCCC
Q 007200 147 RLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSF-SLFTPISFANNQLNNP 203 (613)
Q Consensus 147 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~-~~l~~l~l~~N~i~~~ 203 (613)
+|++|+|++..|..|.++++|+.|+|++|+|++.++.. ..+ ++|+.|++++|++.|.
T Consensus 524 ~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 524 NMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp ECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred ECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 99999999888888999999999999999999888765 455 6899999999999886
No 320
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.57 E-value=1.1e-15 Score=141.03 Aligned_cols=130 Identities=20% Similarity=0.167 Sum_probs=110.4
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|+++. ++......++|+.|+|++|.|++. ..|..+++|++|+|++|+|++..+..|..+++|++|+
T Consensus 18 ~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred cCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 4589999999999995 454333444999999999999965 5799999999999999999966556679999999999
Q ss_pred ccCccccCcccc--ccccccchhhhhhcCCCcccCCCC----CCCCCccccccccCCCCC
Q 007200 148 LNNNSLMGEIPR--SLTNVNSLQVLDLSNNKLTGDIPT----NGSFSLFTPISFANNQLN 201 (613)
Q Consensus 148 L~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~----~~~~~~l~~l~l~~N~i~ 201 (613)
|++|+|+ .+|. .+..+++|+.|++++|+++..+.. ...+++|+.|++++|.+.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 9999997 5665 788999999999999999977664 577899999999998653
No 321
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.57 E-value=6.7e-15 Score=150.24 Aligned_cols=145 Identities=23% Similarity=0.334 Sum_probs=126.1
Q ss_pred CccceeEEeCC----------CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccC
Q 007200 57 PCTWFHVTCNS----------ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYL 126 (613)
Q Consensus 57 ~C~~~gv~c~~----------~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~ 126 (613)
.|.|..+.|.. ...++.|+|++|++++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 46889999964 24789999999999988888999999999999999999988899999999999999999
Q ss_pred ccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCccc--CCC-CCCCCCccccccccCCCCCCC
Q 007200 127 NNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTG--DIP-TNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 127 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~~-~~~~~~~l~~l~l~~N~i~~~ 203 (613)
|+|+ .+|..+. ++|++|+|++|++++..+..+..+++|+.|++++|.++. ..+ ....+++|+.|++++|.+...
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l 186 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI 186 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC
Confidence 9999 5666654 799999999999997777789999999999999999974 333 346788999999999998764
Q ss_pred C
Q 007200 204 P 204 (613)
Q Consensus 204 ~ 204 (613)
+
T Consensus 187 ~ 187 (330)
T 1xku_A 187 P 187 (330)
T ss_dssp C
T ss_pred C
Confidence 4
No 322
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.57 E-value=3.1e-15 Score=137.08 Aligned_cols=109 Identities=31% Similarity=0.330 Sum_probs=97.1
Q ss_pred EEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCc
Q 007200 72 TRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNN 151 (613)
Q Consensus 72 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 151 (613)
+.|++++|+|+. +|..+ .++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 578889999984 55555 388999999999999888999999999999999999999877778899999999999999
Q ss_pred cccCccccccccccchhhhhhcCCCcccCCCC
Q 007200 152 SLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT 183 (613)
Q Consensus 152 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 183 (613)
+|++..+..|..+++|+.|+|++|++++..+.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 99977777899999999999999999977653
No 323
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.57 E-value=3.1e-15 Score=159.15 Aligned_cols=137 Identities=24% Similarity=0.253 Sum_probs=106.2
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccc-cCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSN-NISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N-~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
..+++.|+|++|.|+...+..|.++++|+.|+|++| .++...+..|.++++|++|+|++|+|+ .+| .+..+++|++|
T Consensus 135 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~~~l~~L~~L 212 (440)
T 3zyj_A 135 LSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NLTPLIKLDEL 212 (440)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CCTTCSSCCEE
T ss_pred cccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-ccCCCcccCEE
Confidence 357999999999999777778888888888888884 444344456888888888888888887 444 47778888888
Q ss_pred cccCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCCCC
Q 007200 147 RLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPPPS 206 (613)
Q Consensus 147 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~~~ 206 (613)
+|++|+|++..|..|.++++|+.|+|++|+|++.++.. ..+++|+.|++++|.+...++.
T Consensus 213 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 273 (440)
T 3zyj_A 213 DLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 273 (440)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTT
T ss_pred ECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChh
Confidence 88888888777778888888888888888888776653 6677888888888887765543
No 324
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.56 E-value=3e-15 Score=164.69 Aligned_cols=136 Identities=17% Similarity=0.132 Sum_probs=118.9
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.+++..+..|.++++|+.|+|++|++++..|+.|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 47899999999999888888999999999999999999877888999999999999999999777889999999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccC--CCCCCCCCccccccccCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGD--IPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~--~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
++|++++..+..+.++++|++|++++|.+++. +.....+++|+.|++++|.+...+
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~ 165 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIY 165 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEEC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceec
Confidence 99999866665789999999999999999873 444577899999999999887654
No 325
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.55 E-value=2.9e-15 Score=145.53 Aligned_cols=135 Identities=17% Similarity=0.181 Sum_probs=114.6
Q ss_pred CCCeEEEEcCCCC-cccccchhhhCCCCCCEEEccc-ccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccc-
Q 007200 68 ENSVTRVDLGNAN-LSGQLVSQLGQLTNLQYLELYS-NNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLR- 144 (613)
Q Consensus 68 ~~~l~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~- 144 (613)
..+++.|+|++|. ++...+..|.++++|+.|+|++ |+|++..+..|.++++|++|+|++|++++ +|. |..+++|+
T Consensus 54 l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~ 131 (239)
T 2xwt_C 54 LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDI 131 (239)
T ss_dssp CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCS
T ss_pred CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccccccccc
Confidence 4689999999997 8877777899999999999998 99997777889999999999999999985 666 88888888
Q ss_pred --cccccCc-cccCccccccccccchh-hhhhcCCCcccCCCCCCCCCccccccccCCC-CCCCC
Q 007200 145 --FLRLNNN-SLMGEIPRSLTNVNSLQ-VLDLSNNKLTGDIPTNGSFSLFTPISFANNQ-LNNPP 204 (613)
Q Consensus 145 --~L~L~~N-~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~-i~~~~ 204 (613)
+|+|++| ++++..+..|..+++|+ .|++++|.|+..++.....++|+.|++++|+ +...+
T Consensus 132 L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~ 196 (239)
T 2xwt_C 132 FFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVID 196 (239)
T ss_dssp EEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEEC
T ss_pred ccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCC
Confidence 9999999 89866667788999999 9999999999776665555789999999995 76543
No 326
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.55 E-value=2.9e-15 Score=161.12 Aligned_cols=138 Identities=21% Similarity=0.201 Sum_probs=124.7
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|.+++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+
T Consensus 55 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 46899999999999988899999999999999999999976667789999999999999999988899999999999999
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
|++|.+++..+..|..+++|+.|+|++|.+++.++. ...+++|+.|++++|.+...++
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~ 193 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRD 193 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECT
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeCh
Confidence 999999988888999999999999999999987754 3778899999999998876544
No 327
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.55 E-value=8.6e-16 Score=155.59 Aligned_cols=135 Identities=19% Similarity=0.232 Sum_probs=86.7
Q ss_pred CCeEEEEcCCCCcccccchhh--hCCCCCCEEEcccccCCCCCccccccC-----CcCCeEeccCccCCCCCCccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQL--GQLTNLQYLELYSNNISGKVPEELGNL-----TNLVSLDLYLNNLNGPIPTTLGKLS 141 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~--~~l~~L~~L~L~~N~i~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~ 141 (613)
.+++.|+|++|++++..|..+ ..+++|++|+|++|+|++. |..+..+ ++|++|+|++|+|++..|..|.+++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 466777777777776666654 6677777777777777755 6666665 6777777777777766666777777
Q ss_pred ccccccccCccccCc--ccccc--ccccchhhhhhcCCCcccCCC---CC-CCCCccccccccCCCCCCCC
Q 007200 142 KLRFLRLNNNSLMGE--IPRSL--TNVNSLQVLDLSNNKLTGDIP---TN-GSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 142 ~L~~L~L~~N~l~~~--~~~~~--~~l~~L~~L~l~~N~l~~~~~---~~-~~~~~l~~l~l~~N~i~~~~ 204 (613)
+|++|+|++|++.+. .+..+ ..+++|+.|+|++|.|++.+. .. ..+++|+.|++++|.+...+
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAA 244 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCccc
Confidence 777777777776543 22333 566777777777777763221 11 24566677777777666644
No 328
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.55 E-value=1.8e-15 Score=153.25 Aligned_cols=136 Identities=21% Similarity=0.205 Sum_probs=112.8
Q ss_pred CCCCeEEEEcCCCCcccccchhhhCC-----CCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCC--CCccc--
Q 007200 67 SENSVTRVDLGNANLSGQLVSQLGQL-----TNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGP--IPTTL-- 137 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~-- 137 (613)
...+++.|+|++|.+++. |..+..+ ++|++|+|++|+|++..|..|..+++|++|+|++|++.+. ++..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp CSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred cCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 346899999999999977 7778777 8999999999999988888999999999999999998765 23444
Q ss_pred ccccccccccccCccccCc--cc-cccccccchhhhhhcCCCcccCCC--CCCCCCccccccccCCCCCCC
Q 007200 138 GKLSKLRFLRLNNNSLMGE--IP-RSLTNVNSLQVLDLSNNKLTGDIP--TNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 138 ~~l~~L~~L~L~~N~l~~~--~~-~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~~l~~l~l~~N~i~~~ 203 (613)
.++++|++|+|++|+|++. ++ ..+..+++|+.|+|++|+|++.++ ....+++|+.|++++|.+...
T Consensus 198 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~i 268 (312)
T 1wwl_A 198 LKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQV 268 (312)
T ss_dssp TSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSC
T ss_pred ccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChh
Confidence 8899999999999999832 22 344578999999999999998763 335678999999999998843
No 329
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.54 E-value=4.3e-15 Score=163.41 Aligned_cols=138 Identities=25% Similarity=0.319 Sum_probs=113.0
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCc-cccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVP-EELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
..+++.|+|++|.+++..+. +..+++|+.|+|++|.+++..| ..+..+++|++|+|++|.+++..|..|.++++|++|
T Consensus 372 ~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 450 (570)
T 2z63_A 372 TTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 450 (570)
T ss_dssp CSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEE
T ss_pred cCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEE
Confidence 45788999999998865554 8888889999999988887655 467888888999999988888888888888888888
Q ss_pred cccCcccc-CccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCCCC
Q 007200 147 RLNNNSLM-GEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPPPS 206 (613)
Q Consensus 147 ~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~~~ 206 (613)
+|++|+++ +.+|..+..+++|+.|+|++|++++.++. ...+++|+.|++++|.+...++.
T Consensus 451 ~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 512 (570)
T 2z63_A 451 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDG 512 (570)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred ECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHH
Confidence 88888887 56788888888888888888888887554 47788888888888888776543
No 330
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.54 E-value=6.5e-15 Score=157.19 Aligned_cols=137 Identities=18% Similarity=0.203 Sum_probs=119.2
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|.|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|+...+..|.++++|++|+
T Consensus 98 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 177 (452)
T 3zyi_A 98 LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLD 177 (452)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEe
Confidence 45899999999999988889999999999999999999977777899999999999999999977777899999999999
Q ss_pred ccCc-cccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCCC
Q 007200 148 LNNN-SLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 148 L~~N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
|++| .+....+..|.++++|+.|+|++|.|++. +....+++|+.|++++|.+...++
T Consensus 178 l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~ 235 (452)
T 3zyi_A 178 LGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNLTPLVGLEELEMSGNHFPEIRP 235 (452)
T ss_dssp CCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCCTTCTTCCEEECTTSCCSEECG
T ss_pred CCCCCCccccChhhccCCCCCCEEECCCCccccc-ccccccccccEEECcCCcCcccCc
Confidence 9984 55544445788999999999999999876 456788899999999998876544
No 331
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.54 E-value=1.1e-14 Score=148.79 Aligned_cols=133 Identities=23% Similarity=0.256 Sum_probs=62.2
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCC--CCCccccccC--------------------CcCCeEeccCc
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNIS--GKVPEELGNL--------------------TNLVSLDLYLN 127 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~--~~~p~~~~~l--------------------~~L~~L~Ls~N 127 (613)
+++.|+|++|.+++..+..|.++++|+.|+|++|.++ +..|..|..+ ++|++|+|++|
T Consensus 124 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n 203 (332)
T 2ft3_A 124 SLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHN 203 (332)
T ss_dssp TCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSS
T ss_pred cCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCC
Confidence 4455555555555444444555666666666666553 2334444433 23333333333
Q ss_pred cCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCC
Q 007200 128 NLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNN 202 (613)
Q Consensus 128 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~ 202 (613)
.+++..+..|.++++|++|+|++|++++..+..+..+++|+.|+|++|+|+..+.....+++|+.|++++|.+..
T Consensus 204 ~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 204 KIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp CCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCCCB
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCCCc
Confidence 333333344444444444444444444444444444444444444444444433333444444445555444443
No 332
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.54 E-value=6.7e-15 Score=160.73 Aligned_cols=120 Identities=26% Similarity=0.314 Sum_probs=103.5
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccccc
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLN 149 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 149 (613)
.++.|+|++|+|++ +|. +.++++|+.|+|++|+|+ .+|..|..+++|+.|+|++|+|++ +| .|+++++|++|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47889999999986 555 899999999999999998 788899999999999999999996 66 89999999999999
Q ss_pred CccccCcc-ccccccccchhhhhhcCCCcccCCCCCCC----CCcccccc
Q 007200 150 NNSLMGEI-PRSLTNVNSLQVLDLSNNKLTGDIPTNGS----FSLFTPIS 194 (613)
Q Consensus 150 ~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~~~~~----~~~l~~l~ 194 (613)
+|+|++.. |..+..+++|+.|+|++|+|++.++.... +++|+.|+
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 99999776 88999999999999999999988776532 56666664
No 333
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.54 E-value=7.4e-15 Score=162.42 Aligned_cols=133 Identities=23% Similarity=0.163 Sum_probs=120.8
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.|++..+..|.++++|+.|+|++|.|++..|..|.++++|++|+|++|.|++..+..|.++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 57999999999999888889999999999999999999988888999999999999999999766667899999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
++|.+++..|..|..+++|+.|+|++|.|++.+ ...+++|..|++++|.+...
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l 207 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTL 207 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEE
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCccccc
Confidence 999999888889999999999999999999864 34677888888888877653
No 334
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.53 E-value=6.9e-15 Score=151.67 Aligned_cols=134 Identities=18% Similarity=0.183 Sum_probs=118.1
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCC-cccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIP-TTLGKLSKLRFL 146 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 146 (613)
..+++.|+|++|.+++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..+ ..|.++++|++|
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 75 CVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQIL 154 (353)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEE
Confidence 4689999999999998888899999999999999999997666669999999999999999995444 479999999999
Q ss_pred cccCc-cccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCC
Q 007200 147 RLNNN-SLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLN 201 (613)
Q Consensus 147 ~L~~N-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~ 201 (613)
+|++| .+.+..+..+..+++|+.|++++|.+++.++. ...+++|+.|++++|.+.
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~ 211 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHI 211 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCST
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccc
Confidence 99999 47766678899999999999999999988554 478899999999999763
No 335
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.53 E-value=5.5e-15 Score=160.74 Aligned_cols=137 Identities=25% Similarity=0.304 Sum_probs=116.5
Q ss_pred CCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCC--CCccccccCCcCCeEeccCccCCCCCCc-cccccccc
Q 007200 67 SENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISG--KVPEELGNLTNLVSLDLYLNNLNGPIPT-TLGKLSKL 143 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L 143 (613)
...+++.|+|++|.+++..|..+.++++|+.|+|++|+|++ .+|..+..+++|++|+|++|.+++.+|. .+..+++|
T Consensus 322 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L 401 (520)
T 2z7x_B 322 KISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSL 401 (520)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTC
T ss_pred hCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccC
Confidence 45689999999999998888889999999999999999986 4567789999999999999999975665 48888999
Q ss_pred ccccccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCCC
Q 007200 144 RFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 144 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
++|+|++|++++.+|..+. ++|+.|+|++|+|+..+.....+++|+.|++++|.+...++
T Consensus 402 ~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~ 461 (520)
T 2z7x_B 402 LSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKSIPKQVVKLEALQELNVASNQLKSVPD 461 (520)
T ss_dssp CEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCCT
T ss_pred CEEECcCCCCCcchhhhhc--ccCCEEECCCCcccccchhhhcCCCCCEEECCCCcCCccCH
Confidence 9999999999877776654 78999999999999776666788999999999998886543
No 336
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.53 E-value=1.3e-14 Score=151.85 Aligned_cols=133 Identities=23% Similarity=0.163 Sum_probs=119.9
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
++++.|+|++|.+++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|+|+...+..|.++++|++|+|
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 148 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 148 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEEC
Confidence 57999999999999888889999999999999999999888888999999999999999999655556799999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
++|++++..+..+..+++|+.|++++|.+++.. ...+++|+.|++++|.+...
T Consensus 149 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 149 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp CSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCCSEE
T ss_pred CCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeeccccccccc
Confidence 999999888888999999999999999999763 35678888899998877653
No 337
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.53 E-value=1.9e-14 Score=146.81 Aligned_cols=135 Identities=19% Similarity=0.195 Sum_probs=79.7
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCC--CCccccccCCcCCeEeccCccCC----------------
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISG--KVPEELGNLTNLVSLDLYLNNLN---------------- 130 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~--~~p~~~~~l~~L~~L~Ls~N~l~---------------- 130 (613)
.+++.|++++|.+++..+..+.++++|+.|+|++|.++. ..+..|..+++|++|+|++|.++
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~ 200 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLD 200 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECT
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECC
Confidence 467777787777776666667777777777777777752 55566666666666666665555
Q ss_pred -----CCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCC
Q 007200 131 -----GPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 131 -----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
+..|..|..+++|++|+|++|++++..+..+..+++|+.|+|++|+|+..+.....+++|+.|++++|.+...
T Consensus 201 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~~~ 278 (330)
T 1xku_A 201 GNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAI 278 (330)
T ss_dssp TSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcCCcc
Confidence 3334445555555555555555554444445555555555555555554444444455555555555555443
No 338
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.52 E-value=1.2e-14 Score=159.60 Aligned_cols=138 Identities=27% Similarity=0.323 Sum_probs=120.1
Q ss_pred CCCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCC--CccccccCCcCCeEeccCccCCCCCCc-ccccccc
Q 007200 66 NSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGK--VPEELGNLTNLVSLDLYLNNLNGPIPT-TLGKLSK 142 (613)
Q Consensus 66 ~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~ 142 (613)
....+++.|+|++|.+++..|..+.++++|+.|+|++|+|++. +|..|.++++|++|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 3456899999999999988899999999999999999999963 356789999999999999999985554 5888999
Q ss_pred cccccccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCCC
Q 007200 143 LRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 143 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
|++|+|++|++++.+|..+. ++|+.|+|++|+|+..++....+++|+.|++++|.+...++
T Consensus 430 L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l~~l~~ 490 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQLKSVPD 490 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCCCCCCT
T ss_pred CCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCCCCCCH
Confidence 99999999999877776554 78999999999999888777889999999999999986544
No 339
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.52 E-value=1.6e-15 Score=168.91 Aligned_cols=133 Identities=23% Similarity=0.389 Sum_probs=117.9
Q ss_pred CCCeEEEEcCCCCcccc-----------------cchhhh--CCCCCCEEEcccccCCCCCccccccCCcCCeEeccCcc
Q 007200 68 ENSVTRVDLGNANLSGQ-----------------LVSQLG--QLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNN 128 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~ 128 (613)
.++++.|+|++|.+++. +|..++ ++++|++|+|++|.+.+.+|..|.++++|++|+|++|+
T Consensus 205 l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 205 LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 46899999999999985 888888 99999999999999999999999999999999999998
Q ss_pred -CCC-CCCcccccc------cccccccccCccccCcccc--ccccccchhhhhhcCCCcccCCCCCCCCCccccccccCC
Q 007200 129 -LNG-PIPTTLGKL------SKLRFLRLNNNSLMGEIPR--SLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANN 198 (613)
Q Consensus 129 -l~~-~~p~~~~~l------~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N 198 (613)
+++ .+|..++++ ++|++|+|++|+++ .+|. .+..+++|+.|++++|.++|.++....+++|+.|++++|
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N 363 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYN 363 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCC
Confidence 988 788888876 89999999999998 7887 888999999999999999966666677788888888888
Q ss_pred CCC
Q 007200 199 QLN 201 (613)
Q Consensus 199 ~i~ 201 (613)
.+.
T Consensus 364 ~l~ 366 (636)
T 4eco_A 364 QIT 366 (636)
T ss_dssp EEE
T ss_pred ccc
Confidence 877
No 340
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=1.5e-14 Score=132.59 Aligned_cols=107 Identities=22% Similarity=0.250 Sum_probs=97.4
Q ss_pred CCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcC
Q 007200 95 LQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSN 174 (613)
Q Consensus 95 L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 174 (613)
.+.|++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578999999999 5776553 8999999999999988899999999999999999999977777889999999999999
Q ss_pred CCcccCCCC-CCCCCccccccccCCCCCCCC
Q 007200 175 NKLTGDIPT-NGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 175 N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~ 204 (613)
|+|++.++. ...+++|+.|++++|++.|..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 999998886 478999999999999999864
No 341
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.52 E-value=5.8e-15 Score=163.69 Aligned_cols=137 Identities=20% Similarity=0.215 Sum_probs=111.1
Q ss_pred CCCeEEEEcCCCCcccccch-hhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCC---CCccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVS-QLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGP---IPTTLGKLSKL 143 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L 143 (613)
.++++.|+|++|.+++..+. .+.++++|+.|+|++|.+++..|..|..+++|++|+|++|.+++. .+..+..+++|
T Consensus 399 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L 478 (606)
T 3t6q_A 399 CPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRL 478 (606)
T ss_dssp CTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTC
T ss_pred CccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCc
Confidence 35788899999888876554 488888899999999988888888888888899999998888762 33568888888
Q ss_pred ccccccCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCCC
Q 007200 144 RFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 144 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~~ 205 (613)
++|+|++|++++..|..|..+++|+.|+|++|++++.++.. ..++.| .|++++|.+...++
T Consensus 479 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~ 540 (606)
T 3t6q_A 479 EILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILP 540 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCG
T ss_pred cEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCH
Confidence 88888888888777888888888888888888888776643 677788 88888888876544
No 342
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.52 E-value=1.6e-14 Score=157.07 Aligned_cols=133 Identities=20% Similarity=0.287 Sum_probs=119.7
Q ss_pred CCCeEEEEcCCCCccc--ccchhhhCCCCCCEEEcccccCCCCCcc-ccccCCcCCeEeccCccCCCCCCcccccccccc
Q 007200 68 ENSVTRVDLGNANLSG--QLVSQLGQLTNLQYLELYSNNISGKVPE-ELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLR 144 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~--~~~~~~~~l~~L~~L~L~~N~i~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 144 (613)
..+++.|+|++|.+++ .+|..+.++++|+.|+|++|.+++.+|. .+..+++|++|+|++|++++.+|..+. ++|+
T Consensus 347 l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~ 424 (520)
T 2z7x_B 347 LTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIK 424 (520)
T ss_dssp CSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCC
T ss_pred CCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCC
Confidence 4589999999999997 5567899999999999999999985665 488999999999999999988777665 7999
Q ss_pred cccccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCC
Q 007200 145 FLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 145 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~ 203 (613)
+|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++. ...+++|+.|++++|++.|.
T Consensus 425 ~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 425 VLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp EEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred EEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCccc
Confidence 9999999999 7888888999999999999999987776 57889999999999999885
No 343
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.51 E-value=2.6e-14 Score=143.07 Aligned_cols=126 Identities=25% Similarity=0.377 Sum_probs=96.3
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.+++..+ +.++++|+.|+|++|.+++ +| .+..+++|++|+|++|+|++. +.+..+++|+.|+|
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEc
Confidence 578888888888876544 7788888888888888874 34 378888888888888888753 46777888888888
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
++|++++. ..+..+++|+.|++++|+|++.++ ...+++|+.|++++|.+...
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~l 193 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL 193 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCCC
Confidence 88888754 567778888888888888887665 66777888888888877653
No 344
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.51 E-value=6.1e-15 Score=167.81 Aligned_cols=134 Identities=23% Similarity=0.348 Sum_probs=120.9
Q ss_pred CCCCeEEEEcCCCCccc-----------------ccchhhh--CCCCCCEEEcccccCCCCCccccccCCcCCeEeccCc
Q 007200 67 SENSVTRVDLGNANLSG-----------------QLVSQLG--QLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLN 127 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N 127 (613)
..++++.|+|++|.|++ .+|..++ ++++|+.|+|++|++.+.+|..|.+|++|++|+|++|
T Consensus 446 ~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N 525 (876)
T 4ecn_A 446 RLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACN 525 (876)
T ss_dssp GCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTC
T ss_pred cCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCC
Confidence 35689999999999998 3888877 9999999999999999999999999999999999999
Q ss_pred c-CCC-CCCccccccc-------ccccccccCccccCcccc--ccccccchhhhhhcCCCcccCCCCCCCCCcccccccc
Q 007200 128 N-LNG-PIPTTLGKLS-------KLRFLRLNNNSLMGEIPR--SLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFA 196 (613)
Q Consensus 128 ~-l~~-~~p~~~~~l~-------~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~ 196 (613)
+ |++ .+|..+++++ +|++|+|++|+++ .+|. .+.++++|+.|+|++|.|+. +|....+++|+.|+++
T Consensus 526 ~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~-lp~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 526 RGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRH-LEAFGTNVKLTDLKLD 603 (876)
T ss_dssp TTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCB-CCCCCTTSEESEEECC
T ss_pred CCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCccc-chhhcCCCcceEEECc
Confidence 8 998 7888887776 9999999999999 8888 89999999999999999994 4477889999999999
Q ss_pred CCCCCC
Q 007200 197 NNQLNN 202 (613)
Q Consensus 197 ~N~i~~ 202 (613)
+|.+..
T Consensus 604 ~N~l~~ 609 (876)
T 4ecn_A 604 YNQIEE 609 (876)
T ss_dssp SSCCSC
T ss_pred CCcccc
Confidence 999883
No 345
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=2e-14 Score=132.14 Aligned_cols=106 Identities=22% Similarity=0.223 Sum_probs=96.5
Q ss_pred CEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCC
Q 007200 96 QYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNN 175 (613)
Q Consensus 96 ~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N 175 (613)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 68999999997 6777664 89999999999999988999999999999999999999766667899999999999999
Q ss_pred CcccCCCC-CCCCCccccccccCCCCCCCC
Q 007200 176 KLTGDIPT-NGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 176 ~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~ 204 (613)
+|++.++. ...+++|+.|++++|++.|.+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 99998886 578999999999999998864
No 346
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.51 E-value=1.3e-14 Score=146.70 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=84.3
Q ss_pred CCCeEEEEcCCCCcccccc----hhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCC--C--Cccccc
Q 007200 68 ENSVTRVDLGNANLSGQLV----SQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGP--I--PTTLGK 139 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~----~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~--p~~~~~ 139 (613)
..+++.|+|++|.+++..+ ..+..+++|++|+|++|.|++..|..|..+++|++|+|++|++.+. + +..+..
T Consensus 116 ~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 195 (310)
T 4glp_A 116 GLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK 195 (310)
T ss_dssp CBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS
T ss_pred CCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc
Confidence 3467777777777765433 3345677777777777777766666777777777777777776532 1 222356
Q ss_pred ccccccccccCccccCcccc----ccccccchhhhhhcCCCcccCC-CCCCCC---CccccccccCCCCCCC
Q 007200 140 LSKLRFLRLNNNSLMGEIPR----SLTNVNSLQVLDLSNNKLTGDI-PTNGSF---SLFTPISFANNQLNNP 203 (613)
Q Consensus 140 l~~L~~L~L~~N~l~~~~~~----~~~~l~~L~~L~l~~N~l~~~~-~~~~~~---~~l~~l~l~~N~i~~~ 203 (613)
+++|++|+|++|+++ .++. .+..+++|+.|+|++|+|++.. +....+ ++|+.|++++|.+...
T Consensus 196 l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~l 266 (310)
T 4glp_A 196 FPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQV 266 (310)
T ss_dssp SCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSC
T ss_pred CCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCch
Confidence 677777777777775 2222 2355677777777777777663 333333 5677777777776643
No 347
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.51 E-value=6.7e-15 Score=158.35 Aligned_cols=134 Identities=19% Similarity=0.179 Sum_probs=82.1
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCcc----------------ccccCCcCCeEeccCccCCCC
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPE----------------ELGNLTNLVSLDLYLNNLNGP 132 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~----------------~~~~l~~L~~L~Ls~N~l~~~ 132 (613)
++++.|+|++|.+++..+ +..+++|+.|+|++|.|++..+. ....+++|++|+|++|.|++.
T Consensus 58 ~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~ 135 (487)
T 3oja_A 58 TKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITML 135 (487)
T ss_dssp TTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSG
T ss_pred CCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCC
Confidence 456666666666665444 55566666665555555422110 011234556666666666666
Q ss_pred CCcccccccccccccccCccccCccccccc-cccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCCC
Q 007200 133 IPTTLGKLSKLRFLRLNNNSLMGEIPRSLT-NVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 133 ~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
.|..|+++++|++|+|++|.|++.+|..+. .+++|+.|+|++|.|++.++. ..+++|+.|++++|.+...++
T Consensus 136 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~-~~l~~L~~L~Ls~N~l~~~~~ 208 (487)
T 3oja_A 136 RDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQ-VVFAKLKTLDLSSNKLAFMGP 208 (487)
T ss_dssp GGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECC-CCCTTCCEEECCSSCCCEECG
T ss_pred CchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccccccc-ccCCCCCEEECCCCCCCCCCH
Confidence 666677777777777777777766666665 577777777777777766433 346777777777777766543
No 348
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.51 E-value=2.3e-14 Score=157.42 Aligned_cols=135 Identities=20% Similarity=0.291 Sum_probs=119.0
Q ss_pred CCCCeEEEEcCCCCcccc--cchhhhCCCCCCEEEcccccCCCCCcc-ccccCCcCCeEeccCccCCCCCCccccccccc
Q 007200 67 SENSVTRVDLGNANLSGQ--LVSQLGQLTNLQYLELYSNNISGKVPE-ELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKL 143 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~~--~~~~~~~l~~L~~L~L~~N~i~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 143 (613)
...+++.|+|++|.+++. .|..+.++++|+.|+|++|.+++.+|. .+..+++|++|+|++|+|++.+|..+. ++|
T Consensus 375 ~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L 452 (562)
T 3a79_B 375 TLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKV 452 (562)
T ss_dssp SCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTC
T ss_pred ccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcC
Confidence 346899999999999973 356799999999999999999985554 588999999999999999987776655 799
Q ss_pred ccccccCccccCccccccccccchhhhhhcCCCcccCCCC-CCCCCccccccccCCCCCCCC
Q 007200 144 RFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT-NGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 144 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~~~l~~l~l~~N~i~~~~ 204 (613)
++|+|++|+|+ .+|..+..+++|+.|+|++|+|++.++. ...+++|+.|++++|++.|..
T Consensus 453 ~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 453 KVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp SEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred CEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 99999999999 7788777999999999999999988777 678899999999999998853
No 349
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.51 E-value=1.8e-14 Score=162.04 Aligned_cols=137 Identities=25% Similarity=0.249 Sum_probs=124.8
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 49 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 128 (680)
T 1ziw_A 49 SQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDL 128 (680)
T ss_dssp TTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEEC
T ss_pred CcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEEC
Confidence 58999999999999999999999999999999999999666667999999999999999999887889999999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCC---CCCCccccccccCCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN---GSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~---~~~~~l~~l~l~~N~i~~~~~ 205 (613)
++|.+++..|..+.++++|+.|++++|.+++.++.. ..+++|+.|++++|.+...++
T Consensus 129 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~ 188 (680)
T 1ziw_A 129 SHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSP 188 (680)
T ss_dssp CSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCT
T ss_pred CCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccCh
Confidence 999999888999999999999999999999877643 345899999999999877654
No 350
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.50 E-value=4.6e-15 Score=167.09 Aligned_cols=137 Identities=24% Similarity=0.344 Sum_probs=119.5
Q ss_pred CCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 67 SENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
....++.|+|++|.|. .+|..+.++++|+.|+|++|.|+ .+|..|.+|++|++|+|++|.|+ .+|..|++|++|++|
T Consensus 222 ~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L 298 (727)
T 4b8c_D 222 DDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYF 298 (727)
T ss_dssp CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEE
T ss_pred cCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEE
Confidence 3468999999999999 67777779999999999999999 88999999999999999999999 789999999999999
Q ss_pred cccCccccCccccccccccchhhhhhcCCCcccCCCCCCC-C-CccccccccCCCCCCCCCCC
Q 007200 147 RLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGS-F-SLFTPISFANNQLNNPPPSP 207 (613)
Q Consensus 147 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-~-~~l~~l~l~~N~i~~~~~~~ 207 (613)
+|++|.|+ .+|..|..+++|+.|+|++|+|++.++.... + ..+..+++++|.+.+..|..
T Consensus 299 ~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 299 YFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp ECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred ECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 99999998 7888899999999999999999988776422 1 12234789999998776553
No 351
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.50 E-value=2.1e-14 Score=141.42 Aligned_cols=126 Identities=25% Similarity=0.299 Sum_probs=81.5
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.|++..+ +.++++|+.|+|++|+|++ +|. +.. ++|++|+|++|+|++. +.+.++++|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~-~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNG-IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTT-CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCc-ccc-CcccEEEccCCccCCC--hhhcCcccccEEEC
Confidence 466777777777765443 6667777777777777764 333 222 6677777777777643 34667777777777
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
++|+|++. + .+..+++|+.|+|++|+|++. .....+++|+.|++++|++.+.+
T Consensus 136 s~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 136 RNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp TTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECCC
T ss_pred CCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCCc
Confidence 77777643 3 466677777777777777765 44566667777777777766553
No 352
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.50 E-value=2.2e-14 Score=144.90 Aligned_cols=129 Identities=28% Similarity=0.444 Sum_probs=108.4
Q ss_pred CCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 67 SENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
...+++.|+|++|.+++. ..+..+++|+.|+|++|+|++ ++. +..+++|++|+|++|++++..+ +..+++|++|
T Consensus 83 ~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L 156 (308)
T 1h6u_A 83 NLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYL 156 (308)
T ss_dssp TCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEE
T ss_pred cCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEE
Confidence 346899999999999864 368899999999999999985 444 8999999999999999986543 8889999999
Q ss_pred cccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 147 RLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 147 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
+|++|++++..+ +..+++|+.|++++|.+++.++ ...+++|+.|++++|.+...+
T Consensus 157 ~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 157 SIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCG
T ss_pred EccCCcCCCChh--hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCccc
Confidence 999999985443 8889999999999999987665 567888999999999887765
No 353
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.49 E-value=3.2e-14 Score=142.43 Aligned_cols=129 Identities=28% Similarity=0.345 Sum_probs=114.2
Q ss_pred CCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 67 SENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
...+++.|+|++|.+++ + ..+..+++|+.|+|++|+|++ + ..+..+++|++|+|++|++++. ..+..+++|+.|
T Consensus 88 ~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 161 (291)
T 1h6t_A 88 NLKNLGWLFLDENKVKD-L-SSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 161 (291)
T ss_dssp TCTTCCEEECCSSCCCC-G-GGGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred cCCCCCEEECCCCcCCC-C-hhhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEE
Confidence 45689999999999986 3 349999999999999999995 4 4589999999999999999965 689999999999
Q ss_pred cccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 147 RLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 147 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
+|++|++++..+ +..+++|+.|+|++|.|++.+ ....+++|+.|++++|++...+
T Consensus 162 ~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l~-~l~~l~~L~~L~l~~n~i~~~~ 216 (291)
T 1h6t_A 162 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQECLNKP 216 (291)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEEEEEEEEECCC
T ss_pred EccCCccccchh--hcCCCccCEEECCCCcCCCCh-hhccCCCCCEEECcCCcccCCc
Confidence 999999996655 899999999999999999864 4678999999999999987754
No 354
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.49 E-value=4.5e-14 Score=142.55 Aligned_cols=128 Identities=24% Similarity=0.383 Sum_probs=100.8
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|.+++..+ +.++++|+.|+|++|.+++ ++ .+..+++|++|+|++|++++. + .+..+++|++|+
T Consensus 62 l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~ 135 (308)
T 1h6u_A 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLY 135 (308)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEE
T ss_pred cCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEE
Confidence 4578888888888885544 8888888888888888874 44 588888888888888888854 3 388888888888
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
|++|++++..+ +..+++|+.|+|++|.+++.++ ...+++|+.|++++|.+...+
T Consensus 136 l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~ 189 (308)
T 1h6u_A 136 LDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISDIS 189 (308)
T ss_dssp CCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG
T ss_pred CCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCcCh
Confidence 88888885443 7788888888888888887655 667788888888888886654
No 355
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.49 E-value=8.7e-15 Score=148.03 Aligned_cols=136 Identities=14% Similarity=0.102 Sum_probs=115.7
Q ss_pred CeEEEEcCCCCcccccchhh--hCCCCCCEEEcccccCCCCCc----cccccCCcCCeEeccCccCCCCCCccccccccc
Q 007200 70 SVTRVDLGNANLSGQLVSQL--GQLTNLQYLELYSNNISGKVP----EELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKL 143 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~--~~l~~L~~L~L~~N~i~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 143 (613)
+++.|+|++|.+++..|..+ .++++|+.|+|++|.+++..+ ..+..+++|++|+|++|+|++..+..|.++++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 59999999999999998887 899999999999999997655 345679999999999999998888999999999
Q ss_pred ccccccCccccCc--c--ccccccccchhhhhhcCCCcccCCCC----CCCCCccccccccCCCCCCCCC
Q 007200 144 RFLRLNNNSLMGE--I--PRSLTNVNSLQVLDLSNNKLTGDIPT----NGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 144 ~~L~L~~N~l~~~--~--~~~~~~l~~L~~L~l~~N~l~~~~~~----~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
++|+|++|++.+. + +..+..+++|++|+|++|.|+..+.. ...+++|+.|++++|.+....|
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p 241 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVN 241 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccch
Confidence 9999999998753 2 23347899999999999999854432 2467899999999999988743
No 356
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.48 E-value=2.2e-14 Score=131.12 Aligned_cols=113 Identities=24% Similarity=0.260 Sum_probs=101.9
Q ss_pred hCCCCCCEEEcccccCC-CCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCccccccccccchh
Q 007200 90 GQLTNLQYLELYSNNIS-GKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQ 168 (613)
Q Consensus 90 ~~l~~L~~L~L~~N~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 168 (613)
...++|+.|+|++|.++ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+..+++|+
T Consensus 21 ~~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 21 RTPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp SCTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred CCcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 34588999999999998 78898899999999999999999966 8899999999999999999977888888899999
Q ss_pred hhhhcCCCcccCC--CCCCCCCccccccccCCCCCCCC
Q 007200 169 VLDLSNNKLTGDI--PTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 169 ~L~l~~N~l~~~~--~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
.|+|++|.|++.+ .....+++|+.|++++|++...+
T Consensus 99 ~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 136 (168)
T 2ell_A 99 HLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLN 136 (168)
T ss_dssp EEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTST
T ss_pred EEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchH
Confidence 9999999999865 55688999999999999987654
No 357
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.47 E-value=1.1e-14 Score=130.26 Aligned_cols=112 Identities=21% Similarity=0.237 Sum_probs=101.2
Q ss_pred CCCCCCEEEcccccCC-CCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCccccccccccchhh
Q 007200 91 QLTNLQYLELYSNNIS-GKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQV 169 (613)
Q Consensus 91 ~l~~L~~L~L~~N~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 169 (613)
..++|+.|+|++|.++ +.+|..+..+++|++|+|++|.|++. ..+.++++|++|+|++|++++.+|..+..+++|+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 92 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTH 92 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCE
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCE
Confidence 3478999999999998 78898899999999999999999976 78999999999999999999778888888999999
Q ss_pred hhhcCCCcccCC--CCCCCCCccccccccCCCCCCCC
Q 007200 170 LDLSNNKLTGDI--PTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 170 L~l~~N~l~~~~--~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
|++++|.|++.+ .....+++|+.|++++|++...+
T Consensus 93 L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 129 (149)
T 2je0_A 93 LNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLN 129 (149)
T ss_dssp EECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGST
T ss_pred EECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchH
Confidence 999999999854 55688999999999999887653
No 358
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.47 E-value=6.2e-14 Score=138.08 Aligned_cols=126 Identities=30% Similarity=0.395 Sum_probs=109.5
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|++++|+|+. ++ .+..+++|+.|+|++|+|++..+ +..+++|++|+|++|+|++ +|.. .. ++|++|+
T Consensus 40 l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~ 112 (263)
T 1xeu_A 40 LSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLF 112 (263)
T ss_dssp HTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEE
T ss_pred cCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEE
Confidence 3589999999999984 44 78999999999999999996544 9999999999999999996 4433 33 9999999
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
|++|+|++. + .+..+++|+.|+|++|+|++.+ ....+++|+.|++++|.+...
T Consensus 113 L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 113 LDNNELRDT-D-SLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEECTTSCCCBC
T ss_pred ccCCccCCC-h-hhcCcccccEEECCCCcCCCCh-HHccCCCCCEEECCCCcCcch
Confidence 999999953 3 5899999999999999999874 567889999999999999876
No 359
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.47 E-value=4.6e-15 Score=161.27 Aligned_cols=138 Identities=28% Similarity=0.352 Sum_probs=105.9
Q ss_pred CCCCCCCCCCCc-----cceeE-EeCCCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCC
Q 007200 47 LQSWDATLVNPC-----TWFHV-TCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLV 120 (613)
Q Consensus 47 ~~~w~~~~~~~C-----~~~gv-~c~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~ 120 (613)
+.+|.. ..+|| .|.|+ .|. .++++.|+|++|+|++ +|..+ +++|+.|+|++|+|+ .+| ..+++|+
T Consensus 33 l~~W~~-~~~~~~~~~~~~~~l~~C~-~~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~ 103 (571)
T 3cvr_A 33 WDKWEK-QALPGENRNEAVSLLKECL-INQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLE 103 (571)
T ss_dssp HHHHHT-TCCTTCCHHHHHHHHHHHH-HTTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCC
T ss_pred HHHHhc-cCCccccccchhhhccccc-cCCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCC
Confidence 456754 36778 79998 675 3579999999999986 55544 378999999999998 567 4578899
Q ss_pred eEeccCccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCC
Q 007200 121 SLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQL 200 (613)
Q Consensus 121 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i 200 (613)
+|+|++|+|++ +|. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|.|++.+. .+++|+.|++++|.+
T Consensus 104 ~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 104 YLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCC
T ss_pred EEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCC
Confidence 99999999886 666 655 88888888888885 555 57888888888888887554 567788888888887
Q ss_pred CCCC
Q 007200 201 NNPP 204 (613)
Q Consensus 201 ~~~~ 204 (613)
...+
T Consensus 173 ~~lp 176 (571)
T 3cvr_A 173 TFLP 176 (571)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 7643
No 360
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.46 E-value=5.9e-14 Score=144.19 Aligned_cols=126 Identities=22% Similarity=0.324 Sum_probs=60.2
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccccc
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLN 149 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 149 (613)
+++.|++++|.+++..+ +..+++|+.|+|++|.+++. +. +..+++|++|+|++|.+++. +.+..+++|++|+|+
T Consensus 200 ~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~ 273 (347)
T 4fmz_A 200 SLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDL-SP-LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVG 273 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECC
T ss_pred ccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCC-cc-hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEcc
Confidence 45555555555553322 44555555555555555432 22 45555555555555555432 334445555555555
Q ss_pred CccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCCCCC
Q 007200 150 NNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 150 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~ 203 (613)
+|++++. ..+..+++|+.|++++|++++.++.. ..+++|+.|++++|++...
T Consensus 274 ~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 274 SNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp SSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred CCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 5555432 23444555555555555554443321 3444555555555554443
No 361
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.46 E-value=4.5e-14 Score=154.59 Aligned_cols=131 Identities=19% Similarity=0.221 Sum_probs=108.8
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCC-CCcccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGP-IPTTLGKLSKLRFL 146 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L 146 (613)
.++++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++. .|..+.++++|++|
T Consensus 49 l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 49 CANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 46899999999999988889999999999999999999988888899999999999999999863 57789999999999
Q ss_pred cccCccccCccc-cccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCC
Q 007200 147 RLNNNSLMGEIP-RSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANN 198 (613)
Q Consensus 147 ~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N 198 (613)
+|++|++.+.+| ..+..+++|+.|++++|.+++..+.. ..+++|+.|++++|
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n 182 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLS 182 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccC
Confidence 999999544554 68899999999999999999865543 44444444433333
No 362
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.45 E-value=3.5e-14 Score=145.93 Aligned_cols=135 Identities=19% Similarity=0.147 Sum_probs=104.2
Q ss_pred ccceeEEeCCCCCeEEEEcCCC-CcccccchhhhCCCCCCEEEccc-ccCCCCCccccccCCcCCeEeccCccCCCCCCc
Q 007200 58 CTWFHVTCNSENSVTRVDLGNA-NLSGQLVSQLGQLTNLQYLELYS-NNISGKVPEELGNLTNLVSLDLYLNNLNGPIPT 135 (613)
Q Consensus 58 C~~~gv~c~~~~~l~~L~l~~n-~l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 135 (613)
|.|.+|.|+ ++ +|++ +|. +..+++|+.|+|++ |+|++..+..|.+|++|++|+|++|+|++..|.
T Consensus 8 C~~~~v~~~-----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCT-----------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECC-----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcC-----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 666666654 45 7874 666 99999999999996 999988888999999999999999999998899
Q ss_pred ccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCC--CCCCccccccccCCCCCCCCCC
Q 007200 136 TLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN--GSFSLFTPISFANNQLNNPPPS 206 (613)
Q Consensus 136 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~--~~~~~l~~l~l~~N~i~~~~~~ 206 (613)
.|.+|++|++|+|++|+|++..+..+..++ |+.|+|++|+|.+..... ..+.......+..+.+.|..+.
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 999999999999999999976666676666 999999999998654311 1111112333445566665443
No 363
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.45 E-value=1.3e-13 Score=151.61 Aligned_cols=127 Identities=26% Similarity=0.365 Sum_probs=92.4
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+|+.|+|++|.|++..+ +..+++|+.|+|++|.|++ +| .|..|++|++|+|++|+|++. +.+..|++|+.|+
T Consensus 64 l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~ 137 (605)
T 1m9s_A 64 LPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLY 137 (605)
T ss_dssp CTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEE
Confidence 3577888888888876544 7778888888888888774 33 477777888888888877753 4577777777777
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
|++|+|++. ..+..+++|+.|+|++|.|++.++ ...+++|+.|++++|.+...
T Consensus 138 Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 138 LGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBC
T ss_pred CCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCCC
Confidence 777777744 456777777777777777777665 66677777777777777654
No 364
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.44 E-value=4.8e-14 Score=143.00 Aligned_cols=125 Identities=19% Similarity=0.168 Sum_probs=59.7
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.|++.. .+++|+.|+|++|.|++..+. .+++|++|+|++|++++..+..+..+++|++|+|
T Consensus 80 ~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 151 (317)
T 3o53_A 80 STLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDL 151 (317)
T ss_dssp TTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEEC
T ss_pred CCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEEC
Confidence 34555555555554322 224555555555555533222 2344555555555555444445555555555555
Q ss_pred cCccccCccccccc-cccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCC
Q 007200 149 NNNSLMGEIPRSLT-NVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNN 202 (613)
Q Consensus 149 ~~N~l~~~~~~~~~-~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~ 202 (613)
++|++++..+..+. .+++|+.|+|++|.|++.+. ...+++|+.|++++|.+..
T Consensus 152 s~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~ 205 (317)
T 3o53_A 152 KLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG-QVVFAKLKTLDLSSNKLAF 205 (317)
T ss_dssp TTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC-CCCCTTCCEEECCSSCCCE
T ss_pred CCCCCCcccHHHHhhccCcCCEEECCCCcCccccc-ccccccCCEEECCCCcCCc
Confidence 55555544444332 44555555555555554422 2234555555555555543
No 365
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.43 E-value=8.7e-16 Score=144.63 Aligned_cols=130 Identities=25% Similarity=0.293 Sum_probs=99.4
Q ss_pred CeEEEEcCCCCcccccch------hhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccc
Q 007200 70 SVTRVDLGNANLSGQLVS------QLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKL 143 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~------~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 143 (613)
.++.++++.+.++|..|. .+.++++|+.|+|++|.|++ +| .+..+++|++|+|++|.|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 445555555555555544 78888888888888888885 66 7888888888888888888 677777778888
Q ss_pred ccccccCccccCccccccccccchhhhhhcCCCcccCCC--CCCCCCccccccccCCCCCCCC
Q 007200 144 RFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIP--TNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 144 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~--~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
++|+|++|++++ +| .+..+++|+.|++++|+|++.+. ....+++|+.|++++|++.+.+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~ 156 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDY 156 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccc
Confidence 888888888885 44 57788888888888888886543 4467788888888888776653
No 366
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.43 E-value=1.5e-13 Score=151.06 Aligned_cols=130 Identities=27% Similarity=0.323 Sum_probs=115.7
Q ss_pred CCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccc
Q 007200 67 SENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFL 146 (613)
Q Consensus 67 ~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 146 (613)
...+|+.|+|++|.|++. ..+..+++|+.|+|++|.|++ ++ .+..|++|+.|+|++|+|++. ..+..|++|+.|
T Consensus 85 ~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L 158 (605)
T 1m9s_A 85 NLKNLGWLFLDENKIKDL--SSLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTL 158 (605)
T ss_dssp GCTTCCEEECCSSCCCCC--TTSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEE
T ss_pred cCCCCCEEECcCCCCCCC--hhhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEE
Confidence 346899999999999963 378999999999999999995 44 599999999999999999965 789999999999
Q ss_pred cccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCCC
Q 007200 147 RLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 147 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
+|++|+|++..| +..+++|+.|+|++|+|++. +....+++|+.|++++|++...+.
T Consensus 159 ~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 159 SLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp ECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEEECCCC
T ss_pred ECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcCcCCcc
Confidence 999999997766 89999999999999999986 457889999999999999987654
No 367
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.42 E-value=2.1e-13 Score=156.83 Aligned_cols=132 Identities=26% Similarity=0.283 Sum_probs=120.2
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.+.+..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|.+++..|..|..+++|++|+|
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 345 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDL 345 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEEC
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEEC
Confidence 47999999999999888899999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
++|++++..+..|..+++|+.|+|++|.|++... +++|+.|++++|.+...+
T Consensus 346 ~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~----~~~L~~L~l~~N~l~~l~ 397 (844)
T 3j0a_A 346 QKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF----IPSIPDIFLSGNKLVTLP 397 (844)
T ss_dssp CSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS----CCSCSEEEEESCCCCCCC
T ss_pred CCCCCCccChhhhcCCCCCCEEECCCCCCCcccC----CCCcchhccCCCCccccc
Confidence 9999998878889999999999999999986543 677888888888887543
No 368
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.41 E-value=1.4e-13 Score=141.62 Aligned_cols=147 Identities=14% Similarity=0.129 Sum_probs=116.8
Q ss_pred ccceeEEeCCC----------CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCc-cccccCCcCCe-Eecc
Q 007200 58 CTWFHVTCNSE----------NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVP-EELGNLTNLVS-LDLY 125 (613)
Q Consensus 58 C~~~gv~c~~~----------~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p-~~~~~l~~L~~-L~Ls 125 (613)
|.+..|.|++. .+++.|+|++|+|+...+..|.++++|++|+|++|++.+.+| +.|.++++|++ ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 67888999542 368999999999997666789999999999999999876665 57889988875 6777
Q ss_pred CccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcC-CCcccCCCCC-CCC-CccccccccCCCCCC
Q 007200 126 LNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSN-NKLTGDIPTN-GSF-SLFTPISFANNQLNN 202 (613)
Q Consensus 126 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~~~~-~~~-~~l~~l~l~~N~i~~ 202 (613)
+|+|+...|..|..+++|++|++++|+|+...+..+....++..|++.+ |.+...++.. ..+ ..+..|++++|.+..
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 8999987788999999999999999999966666666777777888855 5677665543 233 457788888888875
Q ss_pred CC
Q 007200 203 PP 204 (613)
Q Consensus 203 ~~ 204 (613)
.+
T Consensus 169 i~ 170 (350)
T 4ay9_X 169 IH 170 (350)
T ss_dssp EC
T ss_pred CC
Confidence 44
No 369
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.39 E-value=4e-13 Score=143.91 Aligned_cols=128 Identities=31% Similarity=0.425 Sum_probs=93.0
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.+++..+ +..+++|+.|+|++|.+++..+ +..+++|++|+|++|++++..+ +..+++|+.|+|
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 467888888888876544 7778888888888888875433 7777888888888888775433 677778888888
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
++|++++..| +..+++|+.|++++|++++. +....+++|+.|++++|.+.+.++
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~~~~~ 370 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTP 370 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCCBCGG
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCccCccch
Confidence 8888776554 56777777777777777765 345667777777777777766543
No 370
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.38 E-value=5e-13 Score=143.12 Aligned_cols=127 Identities=31% Similarity=0.433 Sum_probs=108.4
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|.+++. +.+..+++|+.|+|++|.+++..| +..+++|++|+|++|.+++..+ +..+++|+.|+
T Consensus 220 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 293 (466)
T 1o6v_A 220 LTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLE 293 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEE
T ss_pred cCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEE
Confidence 35799999999999854 468889999999999999986554 8899999999999999996544 88899999999
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
|++|++++..+ +..+++|+.|+|++|++++.++ ...+++|+.|++++|.+.+.
T Consensus 294 L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 294 LNENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCCCCC
T ss_pred cCCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCccCCc
Confidence 99999986544 7889999999999999998776 56788999999999988775
No 371
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.38 E-value=1.2e-13 Score=127.16 Aligned_cols=112 Identities=21% Similarity=0.183 Sum_probs=96.0
Q ss_pred hhhCCCCCCEEEcccccCCCCCccccccCC-cCCeEeccCccCCCCCCcccccccccccccccCccccCccccccccccc
Q 007200 88 QLGQLTNLQYLELYSNNISGKVPEELGNLT-NLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNS 166 (613)
Q Consensus 88 ~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 166 (613)
.+.++++|+.|+|++|+|+ .+|. +..+. +|++|+|++|.|++. ..|..+++|++|+|++|+|++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 4677899999999999999 4565 55554 999999999999965 78999999999999999999655555689999
Q ss_pred hhhhhhcCCCcccCCC--CCCCCCccccccccCCCCCCC
Q 007200 167 LQVLDLSNNKLTGDIP--TNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 167 L~~L~l~~N~l~~~~~--~~~~~~~l~~l~l~~N~i~~~ 203 (613)
|+.|+|++|+|+..+. ....+++|+.|++++|++...
T Consensus 90 L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~ 128 (176)
T 1a9n_A 90 LTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNK 128 (176)
T ss_dssp CCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGS
T ss_pred CCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCc
Confidence 9999999999987665 457889999999999988654
No 372
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.37 E-value=4.6e-13 Score=145.61 Aligned_cols=118 Identities=26% Similarity=0.292 Sum_probs=86.7
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|.|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|++|+
T Consensus 99 l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~ 166 (571)
T 3cvr_A 99 PASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLS 166 (571)
T ss_dssp CTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEE
T ss_pred cCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEE
Confidence 4578888888888886 555 554 88888888888886 665 57888888888888885 555 567888888
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCcc-------ccccccCCCCCCCC
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLF-------TPISFANNQLNNPP 204 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l-------~~l~l~~N~i~~~~ 204 (613)
|++|+|++ +|. |. ++|+.|+|++|.|+..+. ... +| +.|++++|.+...|
T Consensus 167 Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp 223 (571)
T 3cvr_A 167 VRNNQLTF-LPE-LP--ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRITHIP 223 (571)
T ss_dssp CCSSCCSC-CCC-CC--TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCCCCC
T ss_pred CCCCCCCC-cch-hh--CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcceecC
Confidence 88888885 565 54 788888888888886555 322 56 77888888777543
No 373
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.35 E-value=5.6e-15 Score=139.04 Aligned_cols=128 Identities=21% Similarity=0.254 Sum_probs=109.5
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLR 147 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 147 (613)
..+++.|+|++|.+++ +| .+.++++|+.|+|++|.|+ .+|..+..+++|++|+|++|+|++ +| .+..+++|++|+
T Consensus 47 l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~ 121 (198)
T 1ds9_A 47 LKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLY 121 (198)
T ss_dssp TTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEE
T ss_pred CCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEE
Confidence 4589999999999997 56 8999999999999999999 688888889999999999999996 45 689999999999
Q ss_pred ccCccccCccc-cccccccchhhhhhcCCCcccCCCC-----------CCCCCccccccccCCCCCC
Q 007200 148 LNNNSLMGEIP-RSLTNVNSLQVLDLSNNKLTGDIPT-----------NGSFSLFTPISFANNQLNN 202 (613)
Q Consensus 148 L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~-----------~~~~~~l~~l~l~~N~i~~ 202 (613)
|++|++++..+ ..+..+++|+.|++++|++++.++. ...+++|+.|+ +|+++.
T Consensus 122 l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 122 MSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp ESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred CCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 99999995433 4788999999999999999887654 35567777775 666543
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.35 E-value=5.4e-13 Score=145.66 Aligned_cols=107 Identities=26% Similarity=0.348 Sum_probs=97.7
Q ss_pred CCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhc
Q 007200 94 NLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLS 173 (613)
Q Consensus 94 ~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 173 (613)
.|+.|+|++|+|++ +|. |..+++|+.|+|++|+|+ .+|..|+++++|+.|+|++|+|++ +| .+..+++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 57789999999995 676 999999999999999999 889999999999999999999995 67 89999999999999
Q ss_pred CCCcccC--CCCCCCCCccccccccCCCCCCCCC
Q 007200 174 NNKLTGD--IPTNGSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 174 ~N~l~~~--~~~~~~~~~l~~l~l~~N~i~~~~~ 205 (613)
+|+|++. +...+.+++|+.|++++|++.+.++
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 9999998 4556889999999999999987654
No 375
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.35 E-value=8.2e-13 Score=135.63 Aligned_cols=127 Identities=25% Similarity=0.432 Sum_probs=89.0
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|++|+|++|.+++..+ +..+++|++|+|
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEEC
Confidence 467777777777774433 6777777777777777774433 6777777777777777774433 777777777777
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
++|.+++. ..+..+++|+.|++++|.+++. +....+++|+.|++++|.+...+
T Consensus 251 ~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~ 303 (347)
T 4fmz_A 251 GTNQISDI--NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNED 303 (347)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGG
T ss_pred CCCccCCC--hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcC
Confidence 77777743 3567777777777777777765 33456677777777777776543
No 376
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.35 E-value=6.6e-13 Score=136.37 Aligned_cols=107 Identities=20% Similarity=0.116 Sum_probs=96.4
Q ss_pred CEEEcccc-cCCCCCccccccCCcCCeEeccC-ccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhc
Q 007200 96 QYLELYSN-NISGKVPEELGNLTNLVSLDLYL-NNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLS 173 (613)
Q Consensus 96 ~~L~L~~N-~i~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 173 (613)
..++++++ +|+ .+|. |..+++|++|+|++ |.|++..+..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 898 5888 99999999999996 99998888899999999999999999999889999999999999999
Q ss_pred CCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 174 NNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 174 ~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
+|+|++.++.......|+.|++.+|++.|..
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c 119 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSC 119 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCC
Confidence 9999999887654445999999999999864
No 377
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.30 E-value=6.5e-12 Score=133.81 Aligned_cols=129 Identities=18% Similarity=0.186 Sum_probs=80.5
Q ss_pred eeEEeCCCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccc
Q 007200 61 FHVTCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKL 140 (613)
Q Consensus 61 ~gv~c~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 140 (613)
.++......+++.|+|++|.+++. + +.++++|+.|+|++|+|++. + +..+++|++|+|++|+..+.+ .+..+
T Consensus 98 ~~~~~~~l~~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l 169 (457)
T 3bz5_A 98 TNLDVTPLTKLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQ 169 (457)
T ss_dssp SCCCCTTCTTCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTC
T ss_pred ceeecCCCCcCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccC
Confidence 333334456788889988888864 3 78888888888888888863 3 666666666666666444344 35556
Q ss_pred cccccccccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCC
Q 007200 141 SKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNN 202 (613)
Q Consensus 141 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~ 202 (613)
++|++|+|++|++++ +| +..+++|+.|++++|.|++. ....+++|+.|++++|.+..
T Consensus 170 ~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 170 TQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp TTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC
T ss_pred CcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc
Confidence 666666666666664 33 45555555555555555554 23445555555555555554
No 378
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.30 E-value=1.3e-13 Score=143.92 Aligned_cols=134 Identities=16% Similarity=0.241 Sum_probs=85.3
Q ss_pred CCeEEEEcCCCCccc----ccchhhhCC---------CCCCEEEcccccCC-CCCc---cccccCCcCCeEeccCccCC-
Q 007200 69 NSVTRVDLGNANLSG----QLVSQLGQL---------TNLQYLELYSNNIS-GKVP---EELGNLTNLVSLDLYLNNLN- 130 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~----~~~~~~~~l---------~~L~~L~L~~N~i~-~~~p---~~~~~l~~L~~L~Ls~N~l~- 130 (613)
++++.|+|++|.++. .++..+..+ ++|+.|+|++|+|+ +.+| ..|..+++|++|+|++|+|+
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 201 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCH
Confidence 467777777777752 244555555 67777777777776 3333 35566777777777777776
Q ss_pred -C---CCCcccccccccccccccCcccc----CccccccccccchhhhhhcCCCcccC-----CCCC--CCCCccccccc
Q 007200 131 -G---PIPTTLGKLSKLRFLRLNNNSLM----GEIPRSLTNVNSLQVLDLSNNKLTGD-----IPTN--GSFSLFTPISF 195 (613)
Q Consensus 131 -~---~~p~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~l~~L~~L~l~~N~l~~~-----~~~~--~~~~~l~~l~l 195 (613)
| ..|..+.++++|+.|+|++|.|+ +.+|..+..+++|+.|+|++|.|++. +... +.+++|+.|++
T Consensus 202 ~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L 281 (386)
T 2ca6_A 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 281 (386)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEEC
T ss_pred hHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEEC
Confidence 2 23336667777777777777774 35566666777777777777777654 1111 33666777777
Q ss_pred cCCCCCC
Q 007200 196 ANNQLNN 202 (613)
Q Consensus 196 ~~N~i~~ 202 (613)
++|.+..
T Consensus 282 ~~n~i~~ 288 (386)
T 2ca6_A 282 QYNEIEL 288 (386)
T ss_dssp CSSCCBH
T ss_pred cCCcCCH
Confidence 7776655
No 379
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.30 E-value=6.5e-12 Score=133.81 Aligned_cols=117 Identities=26% Similarity=0.274 Sum_probs=65.8
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.+++. | .+..+++|++|+|++|+|++. | +..+++|++|+|++|+|++. + ++++++|++|+|
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEEC
Confidence 3566666666666643 2 455666666666666666642 3 55566666666666666643 2 555666666666
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANN 198 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N 198 (613)
++|++++ +| +..+++|+.|++++|+|++.+ ...+++|+.|++++|
T Consensus 114 ~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l~--l~~l~~L~~L~l~~n 158 (457)
T 3bz5_A 114 DTNKLTK-LD--VSQNPLLTYLNCARNTLTEID--VSHNTQLTELDCHLN 158 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCCEEECTTSCCSCCC--CTTCTTCCEEECTTC
T ss_pred CCCcCCe-ec--CCCCCcCCEEECCCCccceec--cccCCcCCEEECCCC
Confidence 6666653 22 555566666666666665531 334445555555555
No 380
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.29 E-value=8e-13 Score=145.45 Aligned_cols=139 Identities=23% Similarity=0.274 Sum_probs=98.9
Q ss_pred CCCCCCCCCCCCccceeE--------EeCCCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCC
Q 007200 46 VLQSWDATLVNPCTWFHV--------TCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLT 117 (613)
Q Consensus 46 ~~~~w~~~~~~~C~~~gv--------~c~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~ 117 (613)
..++|.. ..+||.|.|. .|. .+.++.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|. .++
T Consensus 11 ~w~~W~~-~~~~~~~~~r~~~~~~~~~c~-~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~ 81 (622)
T 3g06_A 11 VWSAWRR-AAPAEESRGRAAVVQKMRACL-NNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPP 81 (622)
T ss_dssp HHHHHHH-TCCGGGHHHHHHHHHHHHHHH-HHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCT
T ss_pred HHHHHHh-cCCcchhccccccCccccccc-CCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCC
Confidence 3446644 3678888653 332 235888899988888 5666554 78888888888888 4555 568
Q ss_pred cCCeEeccCccCCCCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccC
Q 007200 118 NLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFAN 197 (613)
Q Consensus 118 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~ 197 (613)
+|++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|++++|+|++.+.. +++|+.|++++
T Consensus 82 ~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~lp~~---l~~L~~L~Ls~ 150 (622)
T 3g06_A 82 ELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTSLPVL---PPGLQELSVSD 150 (622)
T ss_dssp TCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSCCCCC---CTTCCEEECCS
T ss_pred CCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCcCCCC---CCCCCEEECcC
Confidence 8888888888888 4555 66788888888888884 444 457777888888888775542 46777788888
Q ss_pred CCCCCCC
Q 007200 198 NQLNNPP 204 (613)
Q Consensus 198 N~i~~~~ 204 (613)
|.+...+
T Consensus 151 N~l~~l~ 157 (622)
T 3g06_A 151 NQLASLP 157 (622)
T ss_dssp SCCSCCC
T ss_pred CcCCCcC
Confidence 8776543
No 381
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.28 E-value=1.9e-11 Score=120.10 Aligned_cols=145 Identities=12% Similarity=0.011 Sum_probs=112.7
Q ss_pred HhhCCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcc-cCccceeeEEEEcCCceEEEE
Q 007200 286 ATDNFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 286 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 364 (613)
..+.|.....++.|+.+.||++... ++.+++|+....... ....+.+|+.+++.+. +..+.++++++......++||
T Consensus 12 ~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~-~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 12 LIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKG-TTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTT-STTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCC-CHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 3456877788888899999999865 789999998753211 2235788999998885 677889999998888899999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc------------------------------------
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH------------------------------------ 408 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------------ 408 (613)
||++|.+|.+.+.. ......++.+++++|+.||+.
T Consensus 90 e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (263)
T 3tm0_A 90 SEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEE 160 (263)
T ss_dssp ECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGST
T ss_pred EecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccc
Confidence 99999998876321 122346788999999999981
Q ss_pred --------------------CCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 409 --------------------CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 409 --------------------~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
..+.++|+|++|.||+++++..+.|+||+.+..
T Consensus 161 ~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 161 DTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp TCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 013689999999999998766667999998753
No 382
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.26 E-value=4.4e-13 Score=138.59 Aligned_cols=135 Identities=23% Similarity=0.256 Sum_probs=93.4
Q ss_pred CCeEEEEcCCCCcccccc----hhhhCCC-CCCEEEcccccCCCCCccccccC-----CcCCeEeccCccCCCCCCcccc
Q 007200 69 NSVTRVDLGNANLSGQLV----SQLGQLT-NLQYLELYSNNISGKVPEELGNL-----TNLVSLDLYLNNLNGPIPTTLG 138 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~----~~~~~l~-~L~~L~L~~N~i~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~ 138 (613)
.+++.|+|++|.|++..+ ..+.+++ +|+.|+|++|.|++..+..|..+ ++|++|+|++|+|++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 458888888888876665 6677777 78888888888887666666665 7888888888888766655444
Q ss_pred c----c-cccccccccCccccCccccccc----c-ccchhhhhhcCCCcccCCCC-----CCCC-CccccccccCCCCCC
Q 007200 139 K----L-SKLRFLRLNNNSLMGEIPRSLT----N-VNSLQVLDLSNNKLTGDIPT-----NGSF-SLFTPISFANNQLNN 202 (613)
Q Consensus 139 ~----l-~~L~~L~L~~N~l~~~~~~~~~----~-l~~L~~L~l~~N~l~~~~~~-----~~~~-~~l~~l~l~~N~i~~ 202 (613)
. + ++|++|+|++|+|++..+..+. . .++|+.|+|++|.|+..... ...+ ++|+.|++++|.+..
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 4 3 7888888888888765554433 3 25788888888888743221 1223 377888888887654
Q ss_pred C
Q 007200 203 P 203 (613)
Q Consensus 203 ~ 203 (613)
.
T Consensus 182 ~ 182 (362)
T 3goz_A 182 K 182 (362)
T ss_dssp S
T ss_pred h
Confidence 3
No 383
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.25 E-value=1.3e-11 Score=131.33 Aligned_cols=117 Identities=28% Similarity=0.332 Sum_probs=65.5
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccccc
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLN 149 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 149 (613)
+++.|++++|.+++. +. ..++|++|+|++|++++ +| .|.++++|++|+|++|++++ +|..+ ++|++|+|+
T Consensus 112 ~L~~L~l~~n~l~~l-~~---~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~ 181 (454)
T 1jl5_A 112 SLKSLLVDNNNLKAL-SD---LPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAG 181 (454)
T ss_dssp TCCEEECCSSCCSCC-CS---CCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECC
T ss_pred CCcEEECCCCccCcc-cC---CCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECc
Confidence 455555555555532 11 01466666666666664 55 36666666666666666664 44332 366666666
Q ss_pred CccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCC
Q 007200 150 NNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLN 201 (613)
Q Consensus 150 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~ 201 (613)
+|++++ +| .+..+++|+.|++++|.+++.+.. .++|+.|++++|.+.
T Consensus 182 ~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 182 NNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPDL---PLSLESIVAGNNILE 228 (454)
T ss_dssp SSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCS
T ss_pred CCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCCC---cCcccEEECcCCcCC
Confidence 666664 34 456666666666666666653321 135555555555554
No 384
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.24 E-value=1.8e-13 Score=139.83 Aligned_cols=131 Identities=22% Similarity=0.248 Sum_probs=71.5
Q ss_pred CCeEEEEcCCCCcccc-cchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCc-cCCCC-CCccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQ-LVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLN-NLNGP-IPTTLGKLSKLRF 145 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~-~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~ 145 (613)
.+++.|+|++|.+++. ++..+.++++|+.|+|++|.+++..+..+..+++|++|+|++| .+++. ++..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 3556666666665543 5555556666666666666665555555556666666666666 45432 3444555666666
Q ss_pred ccccCc-cccCc-ccccccccc-chhhhhhcCCC--cc--cCCCCCCCCCccccccccCCC
Q 007200 146 LRLNNN-SLMGE-IPRSLTNVN-SLQVLDLSNNK--LT--GDIPTNGSFSLFTPISFANNQ 199 (613)
Q Consensus 146 L~L~~N-~l~~~-~~~~~~~l~-~L~~L~l~~N~--l~--~~~~~~~~~~~l~~l~l~~N~ 199 (613)
|+|++| .+++. ++..+..++ +|+.|++++|. ++ +.+.....+++|+.|++++|.
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 233 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV 233 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCT
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCC
Confidence 666666 55532 344455555 66666666663 32 111222345556666666665
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.24 E-value=4.6e-13 Score=139.74 Aligned_cols=133 Identities=22% Similarity=0.264 Sum_probs=64.3
Q ss_pred CCeEEEEcCCCCccc----ccchhhhCCCCCCEEEcccccCCCCCccc----cccC---------CcCCeEeccCccCC-
Q 007200 69 NSVTRVDLGNANLSG----QLVSQLGQLTNLQYLELYSNNISGKVPEE----LGNL---------TNLVSLDLYLNNLN- 130 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~N~i~~~~p~~----~~~l---------~~L~~L~Ls~N~l~- 130 (613)
++++.|+|++|.+++ .++..+.++++|+.|+|++|.|+...+.. +..+ ++|++|+|++|+|+
T Consensus 94 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~ 173 (386)
T 2ca6_A 94 PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLEN 173 (386)
T ss_dssp TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTG
T ss_pred CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCc
Confidence 345555555555554 24445555555555555555554222222 2222 55555555555554
Q ss_pred CCCC---cccccccccccccccCccccC-----ccccccccccchhhhhhcCCCcc----c-CCCCCCCCCccccccccC
Q 007200 131 GPIP---TTLGKLSKLRFLRLNNNSLMG-----EIPRSLTNVNSLQVLDLSNNKLT----G-DIPTNGSFSLFTPISFAN 197 (613)
Q Consensus 131 ~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~~~~~~~l~~L~~L~l~~N~l~----~-~~~~~~~~~~l~~l~l~~ 197 (613)
+.++ ..+..+++|++|+|++|+|+. ..+..+..+++|+.|+|++|.|+ + .+.....+++|+.|++++
T Consensus 174 ~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~ 253 (386)
T 2ca6_A 174 GSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLND 253 (386)
T ss_dssp GGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTT
T ss_pred HHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCC
Confidence 2222 244455555555555555541 22334555555555555555553 1 122223445555555555
Q ss_pred CCCC
Q 007200 198 NQLN 201 (613)
Q Consensus 198 N~i~ 201 (613)
|.+.
T Consensus 254 n~i~ 257 (386)
T 2ca6_A 254 CLLS 257 (386)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 5543
No 386
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.22 E-value=7.6e-13 Score=135.16 Aligned_cols=132 Identities=19% Similarity=0.249 Sum_probs=113.7
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccc-cCCC-CCccccccCCcCCeEeccCc-cCCCC-CCccccccc-c
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSN-NISG-KVPEELGNLTNLVSLDLYLN-NLNGP-IPTTLGKLS-K 142 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N-~i~~-~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~-~ 142 (613)
.++++.|+|++|.+++..+..+..+++|+.|+|++| .+++ .++..+.++++|++|+|++| .+++. ++..+..++ +
T Consensus 117 ~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~ 196 (336)
T 2ast_B 117 CSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSET 196 (336)
T ss_dssp BCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTT
T ss_pred CCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccC
Confidence 468999999999999888899999999999999999 6875 36777899999999999999 99854 577788999 9
Q ss_pred cccccccCc--ccc-CccccccccccchhhhhhcCCC-ccc-CCCCCCCCCccccccccCCC
Q 007200 143 LRFLRLNNN--SLM-GEIPRSLTNVNSLQVLDLSNNK-LTG-DIPTNGSFSLFTPISFANNQ 199 (613)
Q Consensus 143 L~~L~L~~N--~l~-~~~~~~~~~l~~L~~L~l~~N~-l~~-~~~~~~~~~~l~~l~l~~N~ 199 (613)
|++|+|++| .++ +.++..+..+++|+.|++++|. +++ .++....+++|+.|++++|.
T Consensus 197 L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 197 ITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp CCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 999999999 455 4567778889999999999999 664 34455778999999999996
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.20 E-value=1.7e-12 Score=134.22 Aligned_cols=130 Identities=20% Similarity=0.196 Sum_probs=110.8
Q ss_pred EEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCc----cccccCC-cCCeEeccCccCCCCCCcccccc-----cc
Q 007200 73 RVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVP----EELGNLT-NLVSLDLYLNNLNGPIPTTLGKL-----SK 142 (613)
Q Consensus 73 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 142 (613)
.+.|++|++++.+|..+...++|+.|+|++|.|++..+ ..|..++ +|++|+|++|.|++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999999888888889999999999997766 7788998 99999999999998878888876 99
Q ss_pred cccccccCccccCcccccccc----c-cchhhhhhcCCCcccCCCCC-----CC-CCccccccccCCCCCC
Q 007200 143 LRFLRLNNNSLMGEIPRSLTN----V-NSLQVLDLSNNKLTGDIPTN-----GS-FSLFTPISFANNQLNN 202 (613)
Q Consensus 143 L~~L~L~~N~l~~~~~~~~~~----l-~~L~~L~l~~N~l~~~~~~~-----~~-~~~l~~l~l~~N~i~~ 202 (613)
|++|+|++|++++..+..+.. + ++|+.|+|++|.|++..... .. .++|+.|++++|.+..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 152 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGI 152 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGG
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCH
Confidence 999999999999776665444 4 89999999999998765532 22 3689999999998764
No 388
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.20 E-value=1.7e-11 Score=134.77 Aligned_cols=56 Identities=30% Similarity=0.247 Sum_probs=39.5
Q ss_pred cccccccccCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCC
Q 007200 141 SKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 141 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~ 203 (613)
++|+.|+|++|+|++ +| ..+++|+.|+|++|.|+..+. .+++|+.|++++|.+...
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~~l 276 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLTRL 276 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCCSC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCCcC
Confidence 567777777777774 44 345777788888888876554 556777888888877743
No 389
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.17 E-value=1.4e-11 Score=126.52 Aligned_cols=134 Identities=15% Similarity=0.139 Sum_probs=108.1
Q ss_pred EEeCCCCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCC-ccccccc
Q 007200 63 VTCNSENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIP-TTLGKLS 141 (613)
Q Consensus 63 v~c~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~ 141 (613)
++|+. +.++.++++|+ .+|..+ .++|++|+|++|+|+...+++|.++++|++|+|++|++.+.+| ..|.+++
T Consensus 7 C~C~~----~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~ 79 (350)
T 4ay9_X 7 CHCSN----RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLP 79 (350)
T ss_dssp SEEET----TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCT
T ss_pred cEeeC----CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcch
Confidence 67864 46889999999 566655 4689999999999996666789999999999999999977665 4688999
Q ss_pred cccc-ccccCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccC-CCCCCC
Q 007200 142 KLRF-LRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFAN-NQLNNP 203 (613)
Q Consensus 142 ~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~-N~i~~~ 203 (613)
+|++ +.++.|+|+...|..|..+++|+.|++++|+|+..++.. .....+..+++.+ |.+...
T Consensus 80 ~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l 144 (350)
T 4ay9_X 80 KLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTI 144 (350)
T ss_dssp TCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEE
T ss_pred hhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccc
Confidence 8775 677889999777889999999999999999999877654 4455667777765 444443
No 390
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.16 E-value=1.2e-10 Score=114.14 Aligned_cols=129 Identities=14% Similarity=0.038 Sum_probs=97.1
Q ss_pred ccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCc--cceeeEEEEcCCceEEEEecccCCcchh
Q 007200 297 GRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN--LLRLRGFCMTPTERLLVYPFMVNGSVAS 374 (613)
Q Consensus 297 g~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~ 374 (613)
+.|..+.||++...+|+.+++|...... ...+..|+.+++.+.+.+ +.+++++...++..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~----~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT-
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc----chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC-
Confidence 4556699999987778889999876531 134678999998886544 556888888777889999999998884
Q ss_pred hhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------------
Q 007200 375 CLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC--------------------------------------------- 409 (613)
Q Consensus 375 ~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~--------------------------------------------- 409 (613)
... .+ ...++.++++.|+.||+..
T Consensus 104 -~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 104 -SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp -TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred -cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 211 11 2356777788888888641
Q ss_pred ----------CCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 410 ----------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 410 ----------~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
...++|+|++|.||++++++.+.|+|||.+..
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998876677999999853
No 391
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.16 E-value=6.3e-11 Score=126.07 Aligned_cols=121 Identities=25% Similarity=0.289 Sum_probs=99.6
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
.+++.|+|++|.+++ +|.. +++|+.|+|++|++++ +|.. .++|++|+|++|++++ +| .|+++++|++|+|
T Consensus 91 ~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l 160 (454)
T 1jl5_A 91 PHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDV 160 (454)
T ss_dssp TTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEEC
Confidence 578999999999987 5543 4789999999999985 4431 2689999999999996 67 5999999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCCCCCCC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQLNNPP 204 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~i~~~~ 204 (613)
++|++++ +|..+ ++|+.|++++|.+++.+ ....+++|+.|++++|.+...+
T Consensus 161 ~~N~l~~-lp~~~---~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~l~ 211 (454)
T 1jl5_A 161 DNNSLKK-LPDLP---PSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKKLP 211 (454)
T ss_dssp CSSCCSC-CCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSSCC
T ss_pred CCCcCcc-cCCCc---ccccEEECcCCcCCcCc-cccCCCCCCEEECCCCcCCcCC
Confidence 9999985 56543 58999999999999854 6788999999999999988643
No 392
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.10 E-value=4.5e-10 Score=115.71 Aligned_cols=143 Identities=14% Similarity=0.164 Sum_probs=106.7
Q ss_pred CCccccCcCcEEEEEEeCCCCEEEEEEec--cccCcccHHHHHHHHHHHhhcc--cCccceeeEEEEcC---CceEEEEe
Q 007200 293 RNILGRGGFGKVYKGRLTDGSLVAVKRLK--EERTQGGELQFQTEVEMISMAV--HRNLLRLRGFCMTP---TERLLVYP 365 (613)
Q Consensus 293 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~e 365 (613)
.+.++.|.++.||+.... +..+++|+.. ..........+.+|+.+++.+. +..+.+++.++.+. ...++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 456899999999999876 4678898776 3322223446788999999887 45688889888766 34799999
Q ss_pred cccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 007200 366 FMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC------------------------------------ 409 (613)
Q Consensus 366 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~------------------------------------ 409 (613)
|++|..+.+... ..++...+..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~~------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQSL------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCTTC------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCCcc------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 999988754221 12678888999999999999999731
Q ss_pred -------------------CCCeEecCCCCCceeecCCCc--EEEeccccceec
Q 007200 410 -------------------DPKIIHRDVKAANILLDEEFE--AVVGDFGLAKLM 442 (613)
Q Consensus 410 -------------------~~~ivH~Dlk~~NIll~~~~~--~kl~DfGla~~~ 442 (613)
.+.++|+|+++.||+++.++. +.|+||+.+..-
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 247999999999999997753 689999998753
No 393
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.07 E-value=3.6e-12 Score=136.15 Aligned_cols=133 Identities=21% Similarity=0.198 Sum_probs=84.6
Q ss_pred CCeEEEEcCCCCccccc-----chhhhCCCCCCEEEcccccCCCC----CccccccCCcCCeEeccCccCCCCCCccccc
Q 007200 69 NSVTRVDLGNANLSGQL-----VSQLGQLTNLQYLELYSNNISGK----VPEELGNLTNLVSLDLYLNNLNGPIPTTLGK 139 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~-----~~~~~~l~~L~~L~L~~N~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 139 (613)
.+++.|+|++|.++... +..+..+++|+.|+|++|.|+.. ++..+..+++|++|+|++|.++...+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 46778888888776432 22223577788888888877743 5666777777888888888776443333333
Q ss_pred c-----cccccccccCccccCc----cccccccccchhhhhhcCCCcccCCCCC------CCCCccccccccCCCCC
Q 007200 140 L-----SKLRFLRLNNNSLMGE----IPRSLTNVNSLQVLDLSNNKLTGDIPTN------GSFSLFTPISFANNQLN 201 (613)
Q Consensus 140 l-----~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~------~~~~~l~~l~l~~N~i~ 201 (613)
. ++|++|+|++|.+++. ++..+..+++|+.|+|++|.|++..... ...+.|+.|++++|.+.
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 2 5777777777777654 3455566677777777777776432211 11456777777777665
No 394
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.96 E-value=5.8e-10 Score=112.04 Aligned_cols=187 Identities=19% Similarity=0.181 Sum_probs=122.6
Q ss_pred CCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcc-cCc--cceeeEEEEcCC---ceEEEEec
Q 007200 293 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRN--LLRLRGFCMTPT---ERLLVYPF 366 (613)
Q Consensus 293 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~ 366 (613)
.+.++.|.+..||+.. ..+++|+.... .....+.+|.+++..+. +.. +.+++....... ..++||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 3568999999999863 45889986533 23457889999998773 333 344444433332 34789999
Q ss_pred ccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 007200 367 MVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH-------------------------------------- 408 (613)
Q Consensus 367 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~-------------------------------------- 408 (613)
++|.++.+.... .++..++..++.++++.++.||+.
T Consensus 98 i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 98 IKGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cCCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 999988754321 266777888888888888888861
Q ss_pred -----------------CCCCeEecCCCCCceeecC--CCcEEEeccccceecCCCCCceeec-------------cccc
Q 007200 409 -----------------CDPKIIHRDVKAANILLDE--EFEAVVGDFGLAKLMDYKDTHVTTA-------------VRGT 456 (613)
Q Consensus 409 -----------------~~~~ivH~Dlk~~NIll~~--~~~~kl~DfGla~~~~~~~~~~~~~-------------~~gt 456 (613)
..+.++|+|++|.||++++ +..+.|+||+.+...+......... ....
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~ 251 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNH 251 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHH
Confidence 1236899999999999998 5567899999987644321000000 0000
Q ss_pred ccccc-ccccccCCCCCcccchhHHHHHHHHHhCCCCcc
Q 007200 457 IGHIA-PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 494 (613)
Q Consensus 457 ~~y~a-PE~~~~~~~~~~~DVwS~G~il~elltg~~p~~ 494 (613)
.++.. |+.... .....+.|++|.++|++.+|..+|-
T Consensus 252 Y~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 252 YKHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HTCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred cCCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 01111 222111 1122588999999999999998874
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.95 E-value=3.6e-11 Score=128.32 Aligned_cols=135 Identities=18% Similarity=0.161 Sum_probs=96.0
Q ss_pred CCCeEEEEcCCCCcccccchhhh-----CCCCCCEEEcccccCCCC----CccccccCCcCCeEeccCccCCCCCCcccc
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLG-----QLTNLQYLELYSNNISGK----VPEELGNLTNLVSLDLYLNNLNGPIPTTLG 138 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~L~~N~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 138 (613)
.++++.|+|++|.++...+..+. ..++|+.|+|++|++++. ++..+..+++|++|+|++|.++...+..+.
T Consensus 112 ~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 191 (461)
T 1z7x_W 112 LPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLC 191 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHH
T ss_pred CCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHH
Confidence 45788999999988754444333 256788888888888853 355667778888888888888754344443
Q ss_pred c-----ccccccccccCccccCc----cccccccccchhhhhhcCCCcccCC-----CC-CCCCCccccccccCCCCCC
Q 007200 139 K-----LSKLRFLRLNNNSLMGE----IPRSLTNVNSLQVLDLSNNKLTGDI-----PT-NGSFSLFTPISFANNQLNN 202 (613)
Q Consensus 139 ~-----l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~-----~~-~~~~~~l~~l~l~~N~i~~ 202 (613)
. +++|++|+|++|.+++. ++..+..+++|+.|++++|.+++.. +. ...+++|+.|++++|.+..
T Consensus 192 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~ 270 (461)
T 1z7x_W 192 QGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITA 270 (461)
T ss_dssp HHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCH
T ss_pred HHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCH
Confidence 2 56888888888888753 4666777888888888888887531 11 1246778888888887765
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.94 E-value=2e-11 Score=126.07 Aligned_cols=134 Identities=18% Similarity=0.213 Sum_probs=88.1
Q ss_pred CCeEEEEcCCCCcccccchh-hhCCCCCCEEEcccccCCCCCcccc-----ccCCcCCeEeccCccCCCC----CCcccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQ-LGQLTNLQYLELYSNNISGKVPEEL-----GNLTNLVSLDLYLNNLNGP----IPTTLG 138 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~-~~~l~~L~~L~L~~N~i~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~ 138 (613)
.+++.|+|++|.|+...... ...+++|+.|+|++|.|+......+ ...++|++|+|++|.|+.. ++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 47888888888876433322 2345677888888888764333333 2457788888888887632 344456
Q ss_pred cccccccccccCccccCc----cccccccccchhhhhhcCCCcccCCCC-----CCCCCccccccccCCCCCC
Q 007200 139 KLSKLRFLRLNNNSLMGE----IPRSLTNVNSLQVLDLSNNKLTGDIPT-----NGSFSLFTPISFANNQLNN 202 (613)
Q Consensus 139 ~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~-----~~~~~~l~~l~l~~N~i~~ 202 (613)
.+++|++|+|++|.|++. ++..+...++|+.|+|++|.|+..... ...++.|+.|++++|.+..
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 678888888888887642 245566677888888888888743211 1234678888888887643
No 397
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.84 E-value=5.7e-11 Score=122.71 Aligned_cols=133 Identities=19% Similarity=0.197 Sum_probs=100.4
Q ss_pred CCeEEEEcCCCCcccccchhhhCC-----CCCCEEEcccccCCCCCccc-cccCCcCCeEeccCccCCCCCCccc-----
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQL-----TNLQYLELYSNNISGKVPEE-LGNLTNLVSLDLYLNNLNGPIPTTL----- 137 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l-----~~L~~L~L~~N~i~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~----- 137 (613)
..++.|+|++|.|+......+..+ ++|+.|+|++|.|+...... ...+++|++|+|++|.|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 479999999999986544444433 79999999999997433323 3456789999999999985433444
Q ss_pred ccccccccccccCccccCc----cccccccccchhhhhhcCCCcccCC-----CCCCCCCccccccccCCCCC
Q 007200 138 GKLSKLRFLRLNNNSLMGE----IPRSLTNVNSLQVLDLSNNKLTGDI-----PTNGSFSLFTPISFANNQLN 201 (613)
Q Consensus 138 ~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~~-----~~~~~~~~l~~l~l~~N~i~ 201 (613)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|+... ......++|+.|++++|.+.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~ 224 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAG 224 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCC
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCC
Confidence 2468899999999999752 4455677899999999999998532 12244578999999999764
No 398
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=3.6e-09 Score=107.53 Aligned_cols=135 Identities=19% Similarity=0.186 Sum_probs=99.7
Q ss_pred CCCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccc---------------------------------
Q 007200 68 ENSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELG--------------------------------- 114 (613)
Q Consensus 68 ~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~--------------------------------- 114 (613)
..+++.|+|.+ +++.+...+|.++++|+.|+|++|.++...+.+|.
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 35789999998 88877778899999999999999976422222221
Q ss_pred ---------------------------------------------cCCcCCeEeccCccCCCCCCccccccccccccccc
Q 007200 115 ---------------------------------------------NLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLN 149 (613)
Q Consensus 115 ---------------------------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 149 (613)
.+++|+.|+|++|+++...+..|.+|++|+.|+|.
T Consensus 179 ~~~i~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~ 258 (329)
T 3sb4_A 179 ETTIQVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLP 258 (329)
T ss_dssp EEEEEECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECC
T ss_pred ceeEEecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECC
Confidence 26678888888888886556678888888888888
Q ss_pred CccccCccccccccccchh-hhhhcCCCcccCCCCC-CCCCccccccccCCCCCCCCC
Q 007200 150 NNSLMGEIPRSLTNVNSLQ-VLDLSNNKLTGDIPTN-GSFSLFTPISFANNQLNNPPP 205 (613)
Q Consensus 150 ~N~l~~~~~~~~~~l~~L~-~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i~~~~~ 205 (613)
+| ++...+..|.++++|+ .|++.+ .++.+.+.. ..+++|+.+++++|.+...+.
T Consensus 259 ~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~ 314 (329)
T 3sb4_A 259 HN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGD 314 (329)
T ss_dssp TT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECT
T ss_pred cc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccch
Confidence 87 6655566788888888 888877 666655444 667788888888887766543
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.76 E-value=1.5e-10 Score=112.57 Aligned_cols=79 Identities=28% Similarity=0.412 Sum_probs=58.5
Q ss_pred ccCCcCCeEeccCccCCC--CCCcccccccccccccccCccccCcccccccccc--chhhhhhcCCCcccCCCC------
Q 007200 114 GNLTNLVSLDLYLNNLNG--PIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVN--SLQVLDLSNNKLTGDIPT------ 183 (613)
Q Consensus 114 ~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~~~~~------ 183 (613)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|++++..+.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 567899999999999987 4457778899999999999999854 3344444 889999999999875542
Q ss_pred --CCCCCcccccc
Q 007200 184 --NGSFSLFTPIS 194 (613)
Q Consensus 184 --~~~~~~l~~l~ 194 (613)
...+++|+.|+
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 13455665554
No 400
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.65 E-value=4.9e-09 Score=101.97 Aligned_cols=80 Identities=28% Similarity=0.294 Sum_probs=66.3
Q ss_pred hCCCCCCEEEcccccCCC--CCccccccCCcCCeEeccCccCCCCCCccccccc--ccccccccCccccCcccc------
Q 007200 90 GQLTNLQYLELYSNNISG--KVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLS--KLRFLRLNNNSLMGEIPR------ 159 (613)
Q Consensus 90 ~~l~~L~~L~L~~N~i~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~~~------ 159 (613)
.++++|+.|+|++|+|++ .+|+.+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 578999999999999997 4557778999999999999999965 4455555 999999999999976652
Q ss_pred -ccccccchhhhh
Q 007200 160 -SLTNVNSLQVLD 171 (613)
Q Consensus 160 -~~~~l~~L~~L~ 171 (613)
.+..+|+|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 366788888776
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.63 E-value=1.3e-09 Score=120.11 Aligned_cols=135 Identities=14% Similarity=0.166 Sum_probs=83.3
Q ss_pred CCeEEEEcCCCCcccccchhhhC-CCCCCEEEcc----cccCCCC-----CccccccCCcCCeEeccCc--cCCCCCCcc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQ-LTNLQYLELY----SNNISGK-----VPEELGNLTNLVSLDLYLN--NLNGPIPTT 136 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~----~N~i~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~ 136 (613)
++++.|+|+.|++++.....+.. +++|+.|+|+ .|.+++. ++..+.++++|++|+|++| .+++..+..
T Consensus 378 ~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 378 QELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHH
T ss_pred ccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHH
Confidence 35666666666666555555544 6677777775 5566643 2233556777777777643 255443333
Q ss_pred cc-cccccccccccCccccC-ccccccccccchhhhhhcCCCcccC-CCC-CCCCCccccccccCCCCCCC
Q 007200 137 LG-KLSKLRFLRLNNNSLMG-EIPRSLTNVNSLQVLDLSNNKLTGD-IPT-NGSFSLFTPISFANNQLNNP 203 (613)
Q Consensus 137 ~~-~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~-~~~-~~~~~~l~~l~l~~N~i~~~ 203 (613)
+. .+++|++|+|++|++++ .++..+..+++|+.|+|++|++++. ++. ...+++|+.|++++|.++..
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 33 36778888888888765 2344556778888888888887643 121 24567788888888876543
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.60 E-value=4.7e-09 Score=97.08 Aligned_cols=111 Identities=19% Similarity=0.214 Sum_probs=78.9
Q ss_pred CCCeEEEEcCCC-Cccc----ccchhhhCCCCCCEEEcccccCCC----CCccccccCCcCCeEeccCccCCCC----CC
Q 007200 68 ENSVTRVDLGNA-NLSG----QLVSQLGQLTNLQYLELYSNNISG----KVPEELGNLTNLVSLDLYLNNLNGP----IP 134 (613)
Q Consensus 68 ~~~l~~L~l~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~i~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p 134 (613)
..+++.|+|++| .|.. .+...+...++|++|+|++|.|+. .+...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 457888888888 8763 234556677888888888888873 2344566667888888888888743 34
Q ss_pred cccccccccccccc--cCccccCc----cccccccccchhhhhhcCCCcc
Q 007200 135 TTLGKLSKLRFLRL--NNNSLMGE----IPRSLTNVNSLQVLDLSNNKLT 178 (613)
Q Consensus 135 ~~~~~l~~L~~L~L--~~N~l~~~----~~~~~~~l~~L~~L~l~~N~l~ 178 (613)
..+...++|++|+| ++|.|... +...+...++|+.|+|++|.|.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 56677778888888 77888743 2334455577777888777765
No 403
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.58 E-value=3e-07 Score=92.78 Aligned_cols=138 Identities=17% Similarity=0.190 Sum_probs=101.0
Q ss_pred CCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhccc----CccceeeEEEEcCCceEEEE
Q 007200 289 NFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH----RNLLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 289 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lv~ 364 (613)
.....+.++.|..+.||+. |..+++|+..... ....+.+|.+++..+.+ ..+.+++++ ...++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~---~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS---VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH---HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH---HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 4555678999999999998 6678899774322 23457889998888865 224455554 5678999
Q ss_pred ecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------
Q 007200 365 PFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHC----------------------------------- 409 (613)
Q Consensus 365 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~----------------------------------- 409 (613)
||++|.++...... .++......++.++++.|+.||+..
T Consensus 107 e~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 107 KYIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp ECCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred eecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 99999988743211 1566677777888888888888432
Q ss_pred -------------------------CCCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 410 -------------------------DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 410 -------------------------~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
.+.++|+|++|.||+++.+..+.|+||+.+...+
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~~ 239 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVGD 239 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEEC
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccCC
Confidence 1245999999999999997667999999986543
No 404
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.58 E-value=3.1e-08 Score=100.54 Aligned_cols=124 Identities=14% Similarity=0.057 Sum_probs=88.0
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccc-ccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLR-FLR 147 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~ 147 (613)
.+++.+.+.++-...........+++|+.|+|++|+++.+.+.+|.++++|+.|+|++| ++...+..|.+|++|+ .|+
T Consensus 202 ~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~ 280 (329)
T 3sb4_A 202 RDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLE 280 (329)
T ss_dssp GGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred cccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEE
Confidence 45666666554222111112234788888888888888666677888888888888887 7655667788888888 888
Q ss_pred ccCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCcccccc
Q 007200 148 LNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPIS 194 (613)
Q Consensus 148 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~ 194 (613)
|.+ .++...+..|.++++|+.|++++|.++.+.+.. ..+++|+.++
T Consensus 281 l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 281 LPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred Ecc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 888 666556678888888888888888888776654 5566776654
No 405
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.54 E-value=1.6e-08 Score=111.36 Aligned_cols=104 Identities=13% Similarity=0.203 Sum_probs=74.0
Q ss_pred CeEEEEcCCCC-ccc-ccchhhhCCCCCCEEEcccccCCCC----CccccccCCcCCeEeccCccCCC----CCCccccc
Q 007200 70 SVTRVDLGNAN-LSG-QLVSQLGQLTNLQYLELYSNNISGK----VPEELGNLTNLVSLDLYLNNLNG----PIPTTLGK 139 (613)
Q Consensus 70 ~l~~L~l~~n~-l~~-~~~~~~~~l~~L~~L~L~~N~i~~~----~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~ 139 (613)
+++.|+|++|. ++. .++....++++|++|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 48888888876 221 1233345788888888888888755 44455678888888888888873 23445567
Q ss_pred ccccccccccCccccCccccccccccchhhhhhcC
Q 007200 140 LSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSN 174 (613)
Q Consensus 140 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 174 (613)
+++|+.|+|++|.+.+ ++..+..+++|+.|+++.
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 8888888888888874 566677777777777764
No 406
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.50 E-value=3.4e-09 Score=98.03 Aligned_cols=119 Identities=18% Similarity=0.190 Sum_probs=92.5
Q ss_pred ccccchhhhCCCCCCEEEcccc-cCCC----CCccccccCCcCCeEeccCccCCCC----CCcccccccccccccccCcc
Q 007200 82 SGQLVSQLGQLTNLQYLELYSN-NISG----KVPEELGNLTNLVSLDLYLNNLNGP----IPTTLGKLSKLRFLRLNNNS 152 (613)
Q Consensus 82 ~~~~~~~~~~l~~L~~L~L~~N-~i~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~ 152 (613)
...+...+...+.|+.|+|++| .|+. .+...+...++|++|+|++|.|... +...+...++|++|+|++|.
T Consensus 25 ~~~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~ 104 (185)
T 1io0_A 25 EETLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNF 104 (185)
T ss_dssp HHHHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSC
T ss_pred HHHHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCc
Confidence 3345567788999999999999 8873 2455677789999999999999742 34556677899999999999
Q ss_pred ccCc----cccccccccchhhhhh--cCCCcccCC-----CCCCCCCccccccccCCCC
Q 007200 153 LMGE----IPRSLTNVNSLQVLDL--SNNKLTGDI-----PTNGSFSLFTPISFANNQL 200 (613)
Q Consensus 153 l~~~----~~~~~~~l~~L~~L~l--~~N~l~~~~-----~~~~~~~~l~~l~l~~N~i 200 (613)
|... +...+...++|+.|+| ++|.|.... ......+.|+.|++++|.+
T Consensus 105 i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 105 ISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp CCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred CCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 9853 4567778889999999 889998532 1123457899999998855
No 407
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.42 E-value=1.6e-06 Score=85.88 Aligned_cols=141 Identities=21% Similarity=0.243 Sum_probs=92.9
Q ss_pred CCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccC---ccceeeEEEEcCCceEEEEecccC
Q 007200 293 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHR---NLLRLRGFCMTPTERLLVYPFMVN 369 (613)
Q Consensus 293 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~ 369 (613)
.+.|+.|.++.||++...+|+.++||+..... ......+..|++.++.+.+. .+.+++++. ..++||||+++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 46799999999999998889999999865332 22234688999999999865 577787763 46999999999
Q ss_pred Ccchh-----------hhhccCCCC-----------------CCCCHHHHHH--------------------HHHHHHHH
Q 007200 370 GSVAS-----------CLRERGQSQ-----------------PPLNWSVRKQ--------------------IALGAARG 401 (613)
Q Consensus 370 gsL~~-----------~l~~~~~~~-----------------~~l~~~~~~~--------------------i~~~i~~~ 401 (613)
+++.. .+|...... ..-+|..... ....+-+.
T Consensus 95 ~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l 174 (288)
T 3d1u_A 95 RPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKV 174 (288)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHH
Confidence 87642 123221110 0013332210 01111122
Q ss_pred HHHHH----hcCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 402 LAYLH----DHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 402 L~~LH----~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
++.+. ....+.++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 175 ~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 175 LDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 23332 2235689999999999999984 5889999 664
No 408
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.41 E-value=1.8e-06 Score=84.65 Aligned_cols=135 Identities=19% Similarity=0.154 Sum_probs=95.2
Q ss_pred ccccCcCc-EEEEEEeC-CCCEEEEEEeccccCcccHHHHHHHHHHHhhcc-cCccceeeEEEEcCCceEEEEecccCCc
Q 007200 295 ILGRGGFG-KVYKGRLT-DGSLVAVKRLKEERTQGGELQFQTEVEMISMAV-HRNLLRLRGFCMTPTERLLVYPFMVNGS 371 (613)
Q Consensus 295 ~ig~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 371 (613)
.+..|..| .||+.... ++..+++|+-... ....+.+|...++.+. +--+.++++++.+++..++|||+++|.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 45566666 68988765 4667999986532 2446788999888774 3347788888888889999999999988
Q ss_pred chhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-------------------------------------------
Q 007200 372 VASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH------------------------------------------- 408 (613)
Q Consensus 372 L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~------------------------------------------- 408 (613)
+.+...... .....+..++++.|+.||..
T Consensus 107 ~~~~~~~~~--------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 107 AFQVLEEYP--------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp HHHHHHHCG--------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccccCCH--------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 776543211 12234455555555555532
Q ss_pred ------------CCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 409 ------------CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 409 ------------~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
..+.++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 112488999999999999887778999998864
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.37 E-value=1.7e-08 Score=111.06 Aligned_cols=60 Identities=8% Similarity=0.107 Sum_probs=25.8
Q ss_pred ccccccccccCccccCcccccc-ccccchhhhhhcCCCcccCCC--CCCCCCccccccccCCC
Q 007200 140 LSKLRFLRLNNNSLMGEIPRSL-TNVNSLQVLDLSNNKLTGDIP--TNGSFSLFTPISFANNQ 199 (613)
Q Consensus 140 l~~L~~L~L~~N~l~~~~~~~~-~~l~~L~~L~l~~N~l~~~~~--~~~~~~~l~~l~l~~N~ 199 (613)
+++|+.|+|++|.+++..+..+ ..+++|+.|+|++|++++... ....+++|+.|++++|+
T Consensus 455 ~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 455 AKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp CTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred chhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 4445555555555443322222 334555555555555432211 11234445555555543
No 410
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.37 E-value=3.2e-06 Score=84.59 Aligned_cols=136 Identities=18% Similarity=0.165 Sum_probs=93.6
Q ss_pred CccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccC---ccceeeEEEE-cCCceEEEEecccC
Q 007200 294 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHR---NLLRLRGFCM-TPTERLLVYPFMVN 369 (613)
Q Consensus 294 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~ 369 (613)
+.++.|....||+. |..+++|+... ......+.+|.+++..+.+. .+.+++.+.. ..+..+++|||++|
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 45788888899988 56788888532 22345788999999988742 3566677664 34567899999999
Q ss_pred CcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-----------------------------------------
Q 007200 370 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDH----------------------------------------- 408 (613)
Q Consensus 370 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~----------------------------------------- 408 (613)
..+.+..-. .++......++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGMA------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhhh------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 888763211 133444455555555555555532
Q ss_pred ----------------CCCCeEecCCCCCceeecC---CCc-EEEeccccceec
Q 007200 409 ----------------CDPKIIHRDVKAANILLDE---EFE-AVVGDFGLAKLM 442 (613)
Q Consensus 409 ----------------~~~~ivH~Dlk~~NIll~~---~~~-~kl~DfGla~~~ 442 (613)
..+.++|+|+++.||+++. ++. +.|+||+.+..-
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 2336799999999999998 455 489999988643
No 411
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.26 E-value=4.2e-08 Score=108.00 Aligned_cols=130 Identities=15% Similarity=0.140 Sum_probs=72.5
Q ss_pred CCeEEEEcCCCCcccccchhhh-CCCCCCEEEcccc-cCCCC-CccccccCCcCCeEeccCccCCCCCCcccc----ccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLG-QLTNLQYLELYSN-NISGK-VPEELGNLTNLVSLDLYLNNLNGPIPTTLG----KLS 141 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~-~l~~L~~L~L~~N-~i~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~ 141 (613)
++++.|+|++|.+++..+..+. .+++|+.|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 3667777777776655555554 5677777777776 44421 334344677777777777776654443333 455
Q ss_pred ccccccccCcc--ccCc-cccccccccchhhhhhcCC-CcccCCCCCCCCCccccccccCC
Q 007200 142 KLRFLRLNNNS--LMGE-IPRSLTNVNSLQVLDLSNN-KLTGDIPTNGSFSLFTPISFANN 198 (613)
Q Consensus 142 ~L~~L~L~~N~--l~~~-~~~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~~~l~~l~l~~N 198 (613)
+|+.|+|++|. +... ++..+..+++|+.|+|++| .+.+.+.....+++|+.|+++.+
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBC
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccc
Confidence 77777777765 2211 1112234567777777766 33332222244555666655443
No 412
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.22 E-value=6.8e-06 Score=84.21 Aligned_cols=143 Identities=13% Similarity=0.099 Sum_probs=90.5
Q ss_pred CCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCc--cceeeEEEEcC-CceEEEEecccC
Q 007200 293 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN--LLRLRGFCMTP-TERLLVYPFMVN 369 (613)
Q Consensus 293 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~ 369 (613)
.+.++.|....+|+... +|..+++|..... ..+..|..++..+.... +.+++.++... ...++||||++|
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 45688999999999886 4788999987432 25778888888876433 56677776654 567999999998
Q ss_pred Ccchhh------------------hhccCCCC---------C----CCCHHHH---------------------HHHHHH
Q 007200 370 GSVASC------------------LRERGQSQ---------P----PLNWSVR---------------------KQIALG 397 (613)
Q Consensus 370 gsL~~~------------------l~~~~~~~---------~----~l~~~~~---------------------~~i~~~ 397 (613)
.++.+. ++...... . .-.|... ......
T Consensus 119 ~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 198 (362)
T 3ovc_A 119 VTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQA 198 (362)
T ss_dssp EETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHH
T ss_pred CCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHH
Confidence 766431 11111000 0 0011111 011111
Q ss_pred HHHHHHHHHhcCC--CCeEecCCCCCceeecCCCcEEEeccccceecC
Q 007200 398 AARGLAYLHDHCD--PKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 443 (613)
Q Consensus 398 i~~~L~~LH~~~~--~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~ 443 (613)
+...++++. ..+ +.++|+|+++.||++++++.+.|+||+.+..-+
T Consensus 199 ~~~l~~~l~-~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~gd 245 (362)
T 3ovc_A 199 LDELMLWAE-DCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFGD 245 (362)
T ss_dssp HHHHHHHGG-GCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEEC
T ss_pred HHHHHHHHh-hCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccCC
Confidence 222223332 222 478999999999999887778899999987543
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.20 E-value=1.9e-07 Score=95.54 Aligned_cols=60 Identities=22% Similarity=0.219 Sum_probs=26.7
Q ss_pred hhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccc--ccccccccccc
Q 007200 87 SQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLG--KLSKLRFLRLN 149 (613)
Q Consensus 87 ~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~L~ 149 (613)
..+..+|+|+.|+|++|.-. .++. +. +++|+.|+|..|.++......+. .+++|+.|+|+
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~ 227 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLY 227 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEE
T ss_pred HHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEe
Confidence 44455555555555555211 1222 22 45555555555554422222222 45555555553
No 414
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.20 E-value=3.9e-06 Score=85.89 Aligned_cols=81 Identities=7% Similarity=-0.008 Sum_probs=55.3
Q ss_pred Ccc-ccCcCcEEEEEEeC-------CCCEEEEEEeccccC--cccHHHHHHHHHHHhhccc---CccceeeEEEEcC---
Q 007200 294 NIL-GRGGFGKVYKGRLT-------DGSLVAVKRLKEERT--QGGELQFQTEVEMISMAVH---RNLLRLRGFCMTP--- 357 (613)
Q Consensus 294 ~~i-g~G~~g~V~~~~~~-------~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~--- 357 (613)
+.| +.|....+|+.... +++.+++|+...... ......+.+|+.+++.+.. -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999988754 266789998654320 0011346788888887752 3467788877654
Q ss_pred CceEEEEecccCCcchh
Q 007200 358 TERLLVYPFMVNGSVAS 374 (613)
Q Consensus 358 ~~~~lv~e~~~~gsL~~ 374 (613)
...++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 34689999999887664
No 415
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.09 E-value=5.9e-06 Score=85.90 Aligned_cols=127 Identities=14% Similarity=0.075 Sum_probs=72.1
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEcccc---------------------cCCCCCccccccCCcCCeEeccCcc
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSN---------------------NISGKVPEELGNLTNLVSLDLYLNN 128 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N---------------------~i~~~~p~~~~~l~~L~~L~Ls~N~ 128 (613)
+++.+.|.+ +++.+....|.++++|+.|+|..| +++..-..+|.++++|+.++|.+|.
T Consensus 204 ~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l~~~l~~I~~~aF~~~~L~~i~lp~~i~~I~~~aF~~c~~L~~l~l~~~~ 282 (401)
T 4fdw_A 204 GIEEVLLPV-TLKEIGSQAFLKTSQLKTIEIPENVSTIGQEAFRESGITTVKLPNGVTNIASRAFYYCPELAEVTTYGST 282 (401)
T ss_dssp CCSEEECCT-TCCEECTTTTTTCTTCCCEECCTTCCEECTTTTTTCCCSEEEEETTCCEECTTTTTTCTTCCEEEEESSC
T ss_pred ccCEEEeCC-chheehhhHhhCCCCCCEEecCCCccCccccccccCCccEEEeCCCccEEChhHhhCCCCCCEEEeCCcc
Confidence 456666653 355444455666666666666543 3333334556666666666666665
Q ss_pred CC-----CCCCcccccccccccccccCccccCccccccccccchhhhhhcCCCcccCCCCC-CCCCccccccccCCCC
Q 007200 129 LN-----GPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANNQL 200 (613)
Q Consensus 129 l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N~i 200 (613)
+. ...+..|.+|++|+.++|. |.++......|.++++|+.|.|.+| ++.+.... ..+ +|+.+.+.+|.+
T Consensus 283 ~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 283 FNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp CCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSC
T ss_pred ccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCC
Confidence 54 2334556666667777666 3355444556666677777776444 54444333 334 667777766644
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.04 E-value=6.7e-07 Score=91.45 Aligned_cols=131 Identities=20% Similarity=0.297 Sum_probs=91.7
Q ss_pred CCCeEEEEcCCCC-cccccchhhhCCCCCCEEEcccccCCCCCccccc--cCCcCCeEeccC--ccCCCC-----CCccc
Q 007200 68 ENSVTRVDLGNAN-LSGQLVSQLGQLTNLQYLELYSNNISGKVPEELG--NLTNLVSLDLYL--NNLNGP-----IPTTL 137 (613)
Q Consensus 68 ~~~l~~L~l~~n~-l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~ 137 (613)
.++++.|+|++|. +. ++. + .+++|+.|+|..|.++......+. .+++|++|+|+. |...+. +...+
T Consensus 171 ~P~L~~L~L~g~~~l~--l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 171 MPLLNNLKIKGTNNLS--IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp CTTCCEEEEECCBTCB--CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred CCCCcEEEEeCCCCce--ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 4689999998873 32 333 3 388999999999988743333444 789999999864 222211 11223
Q ss_pred --ccccccccccccCccccCccccccc---cccchhhhhhcCCCcccC-----CCCCCCCCccccccccCCCCCC
Q 007200 138 --GKLSKLRFLRLNNNSLMGEIPRSLT---NVNSLQVLDLSNNKLTGD-----IPTNGSFSLFTPISFANNQLNN 202 (613)
Q Consensus 138 --~~l~~L~~L~L~~N~l~~~~~~~~~---~l~~L~~L~l~~N~l~~~-----~~~~~~~~~l~~l~l~~N~i~~ 202 (613)
..+++|++|+|++|.+.+..+..+. .+++|+.|+|+.|.|.+. ......+++|+.|++++|.++.
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 2478999999999998754433332 578999999999999863 2222457889999999997754
No 417
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.04 E-value=3.9e-06 Score=87.26 Aligned_cols=111 Identities=13% Similarity=0.113 Sum_probs=90.8
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCC-----CCCccccccCCcCCeEeccCccCCCCCCccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNIS-----GKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKL 143 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 143 (613)
.+++.+.| .++++......|.++++|+.++|.+|.+. ...+.+|.++++|+.++|. |.++..-...|.+|++|
T Consensus 248 ~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L 325 (401)
T 4fdw_A 248 SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKV 325 (401)
T ss_dssp CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSC
T ss_pred CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCc
Confidence 35677777 45676566788999999999999998875 3556789999999999999 55876667889999999
Q ss_pred ccccccCccccCccccccccccchhhhhhcCCCcccCCCC
Q 007200 144 RFLRLNNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPT 183 (613)
Q Consensus 144 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 183 (613)
+.|.|..| ++......|.++ +|+.|++++|.+......
T Consensus 326 ~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~ 363 (401)
T 4fdw_A 326 TQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEK 363 (401)
T ss_dssp CEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCS
T ss_pred cEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccc
Confidence 99999766 665667789999 999999999988765543
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.02 E-value=3.8e-05 Score=77.87 Aligned_cols=141 Identities=16% Similarity=0.187 Sum_probs=79.7
Q ss_pred CccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhccc--CccceeeE------EEEcCCceEEEEe
Q 007200 294 NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH--RNLLRLRG------FCMTPTERLLVYP 365 (613)
Q Consensus 294 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~------~~~~~~~~~lv~e 365 (613)
+.|+.|..+.||+....+| .+++|+.... ...+..|..++..+.. -.+.+++. +....+..+++|+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 3466677899999987654 5899988652 1233445555554431 12333332 1223566789999
Q ss_pred cccCCcch--------------hhhhccCCC---C-------CCCCHHHH------------------------------
Q 007200 366 FMVNGSVA--------------SCLRERGQS---Q-------PPLNWSVR------------------------------ 391 (613)
Q Consensus 366 ~~~~gsL~--------------~~l~~~~~~---~-------~~l~~~~~------------------------------ 391 (613)
|++|..+. ..+|..... . ..-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99987653 112211100 0 01123211
Q ss_pred -HHHHHHHHHHHHHHHh----------cCCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 392 -KQIALGAARGLAYLHD----------HCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 392 -~~i~~~i~~~L~~LH~----------~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
..+...+.+++++|+. .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111223445666763 124489999999999999888899999999875
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.96 E-value=4.2e-05 Score=79.47 Aligned_cols=76 Identities=9% Similarity=-0.044 Sum_probs=49.1
Q ss_pred CCccccCcCcEEEEEEeC-CCCEEEEEEeccccC------cccHHHHHHHHHHHhhccc--Cc-cceeeEEEEcCCceEE
Q 007200 293 RNILGRGGFGKVYKGRLT-DGSLVAVKRLKEERT------QGGELQFQTEVEMISMAVH--RN-LLRLRGFCMTPTERLL 362 (613)
Q Consensus 293 ~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~e~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 362 (613)
.+.||.|.++.||++... +++.++||....... .....++..|.+++..+.. +. +.+++.+ +....++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 356899999999999754 468899998653221 1122356778888877642 33 4455543 3455789
Q ss_pred EEecccCC
Q 007200 363 VYPFMVNG 370 (613)
Q Consensus 363 v~e~~~~g 370 (613)
||||+.+.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 420
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.78 E-value=0.0002 Score=71.40 Aligned_cols=139 Identities=14% Similarity=0.124 Sum_probs=92.6
Q ss_pred CCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcc---cCccceeeEEEEcCCceEEEEecccC
Q 007200 293 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAV---HRNLLRLRGFCMTPTERLLVYPFMVN 369 (613)
Q Consensus 293 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~ 369 (613)
.+.|+.|.+..+|+... ++..+++|+.... ....+..|.+.++.+. ...+.+++.+.......++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 35689999999999986 4678899987542 2456888999888775 35688888888877889999999998
Q ss_pred Ccchh-----------hhhccCC-C-----------------CCCCCHHHHH---HHHH----------------HHHHH
Q 007200 370 GSVAS-----------CLRERGQ-S-----------------QPPLNWSVRK---QIAL----------------GAARG 401 (613)
Q Consensus 370 gsL~~-----------~l~~~~~-~-----------------~~~l~~~~~~---~i~~----------------~i~~~ 401 (613)
..+.. .+|.... . ...-+|.... ++.. .+...
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 86632 2233221 0 0012454332 1111 11111
Q ss_pred -HHHHHh-cCCCCeEecCCCCCceeecCCCcEEEeccc
Q 007200 402 -LAYLHD-HCDPKIIHRDVKAANILLDEEFEAVVGDFG 437 (613)
Q Consensus 402 -L~~LH~-~~~~~ivH~Dlk~~NIll~~~~~~kl~DfG 437 (613)
...|.. ...+.++|+|+.+.|++++.++ +.|+|+.
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 223321 2246899999999999999887 8899974
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.73 E-value=3.5e-06 Score=75.93 Aligned_cols=83 Identities=13% Similarity=0.241 Sum_probs=55.1
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEccccc-CCCCCccccccC----CcCCeEeccCcc-CCCCCCccccccccc
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNN-ISGKVPEELGNL----TNLVSLDLYLNN-LNGPIPTTLGKLSKL 143 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~-i~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~L 143 (613)
.++.|||+++.|+..--..+.++++|+.|+|+++. |+..--..+..+ ++|++|+|++|. |+..--..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 68888888888775544566788888888888874 553222234443 368888888774 663323346667777
Q ss_pred ccccccCcc
Q 007200 144 RFLRLNNNS 152 (613)
Q Consensus 144 ~~L~L~~N~ 152 (613)
++|+|+++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 778777764
No 422
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.72 E-value=7.3e-06 Score=73.86 Aligned_cols=86 Identities=13% Similarity=0.112 Sum_probs=67.3
Q ss_pred CCCCEEEcccccCCCCCccccccCCcCCeEeccCcc-CCCCCCcccccc----cccccccccCcc-ccCccccccccccc
Q 007200 93 TNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNN-LNGPIPTTLGKL----SKLRFLRLNNNS-LMGEIPRSLTNVNS 166 (613)
Q Consensus 93 ~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~ 166 (613)
.+|+.|||+++.|+..--..+..+++|++|+|++|. |+..--..++.+ ++|++|+|++|. |+..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999885444567899999999999995 764323345553 479999999985 88655556788999
Q ss_pred hhhhhhcCCC-cc
Q 007200 167 LQVLDLSNNK-LT 178 (613)
Q Consensus 167 L~~L~l~~N~-l~ 178 (613)
|+.|+|++++ ++
T Consensus 141 L~~L~L~~c~~It 153 (176)
T 3e4g_A 141 LKYLFLSDLPGVK 153 (176)
T ss_dssp CCEEEEESCTTCC
T ss_pred CCEEECCCCCCCC
Confidence 9999999986 44
No 423
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.68 E-value=7.3e-06 Score=75.31 Aligned_cols=83 Identities=16% Similarity=0.180 Sum_probs=47.2
Q ss_pred CCeEEEEcCCC-Cccc----ccchhhhCCCCCCEEEcccccCCC----CCccccccCCcCCeEeccCccCCCC----CCc
Q 007200 69 NSVTRVDLGNA-NLSG----QLVSQLGQLTNLQYLELYSNNISG----KVPEELGNLTNLVSLDLYLNNLNGP----IPT 135 (613)
Q Consensus 69 ~~l~~L~l~~n-~l~~----~~~~~~~~l~~L~~L~L~~N~i~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 135 (613)
..++.|+|++| .|.. .+...+..-+.|+.|+|++|.|.. .+...+..-+.|++|+|++|.|... +.+
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 45677777764 5542 233455555667777777777662 2344455556677777777766632 223
Q ss_pred ccccccccccccccCc
Q 007200 136 TLGKLSKLRFLRLNNN 151 (613)
Q Consensus 136 ~~~~l~~L~~L~L~~N 151 (613)
.+..-+.|++|+|++|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 3444455666666644
No 424
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.58 E-value=0.00046 Score=72.14 Aligned_cols=79 Identities=11% Similarity=0.058 Sum_probs=47.8
Q ss_pred CCCeEecCCCCCceeecCCCcEEEeccccceecCCCCCceeecc-ccccccccccccccC---CCCCcccchhHHHHHHH
Q 007200 410 DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAV-RGTIGHIAPEYLSTG---KSSEKTDVFGYGVMLLE 485 (613)
Q Consensus 410 ~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~---~~~~~~DVwS~G~il~e 485 (613)
.+.++|+|+++.|||++.++ ++++||+.+..-+....- .... .-...|++|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34899999999999999876 999999998754321100 0000 011346666654311 11223455577777787
Q ss_pred HHhCC
Q 007200 486 LITGQ 490 (613)
Q Consensus 486 lltg~ 490 (613)
.++++
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 425
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.53 E-value=0.00033 Score=69.09 Aligned_cols=79 Identities=16% Similarity=0.207 Sum_probs=55.8
Q ss_pred CCCCCCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhccc---CccceeeEEEEcCCceEEEEe
Q 007200 289 NFSNRNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH---RNLLRLRGFCMTPTERLLVYP 365 (613)
Q Consensus 289 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~~~~~~lv~e 365 (613)
.....+.+|.|..+.||+.+..+|+.|++|+...... .....|..|...|+.+.- --+.+++++. ..+++||
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~-~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e 90 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP-ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAME 90 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC-CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEE
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc-chhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEE
Confidence 3444567899999999999999999999998754432 223357889998887742 2244555542 3478999
Q ss_pred cccCCcc
Q 007200 366 FMVNGSV 372 (613)
Q Consensus 366 ~~~~gsL 372 (613)
|+.++..
T Consensus 91 ~l~~~~~ 97 (288)
T 3f7w_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred eecccCC
Confidence 9987654
No 426
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.40 E-value=0.0007 Score=67.21 Aligned_cols=140 Identities=11% Similarity=0.066 Sum_probs=76.7
Q ss_pred CCccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCccc-eeeEEEEcCCceEEEEecc-cCC
Q 007200 293 RNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLL-RLRGFCMTPTERLLVYPFM-VNG 370 (613)
Q Consensus 293 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~-~~g 370 (613)
.+.|+.|....+|+. ..+++|+....... ......|..++..+....+. +++++ .+..-++++||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 567889999999999 45888887643211 11235677777766533333 44443 444567999999 665
Q ss_pred cchhh------------------hhccCCCC-CCCC-HHHHHHHHHH--------------HHHHHH----HHHh-cCCC
Q 007200 371 SVASC------------------LRERGQSQ-PPLN-WSVRKQIALG--------------AARGLA----YLHD-HCDP 411 (613)
Q Consensus 371 sL~~~------------------l~~~~~~~-~~l~-~~~~~~i~~~--------------i~~~L~----~LH~-~~~~ 411 (613)
++... +|...... ..++ +.....+... +.+.+. .+.. ....
T Consensus 94 ~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~ 173 (301)
T 3dxq_A 94 TMSPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPL 173 (301)
T ss_dssp ECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCC
T ss_pred cCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCc
Confidence 55320 11111100 0011 1111111110 111111 1111 1233
Q ss_pred CeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 412 KIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 412 ~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
.++|+|+.+.||+ ..++.+.++||..+..-
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~g 203 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGMN 203 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccCC
Confidence 6899999999999 55668899999988643
No 427
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.27 E-value=0.0002 Score=74.26 Aligned_cols=109 Identities=7% Similarity=0.148 Sum_probs=53.8
Q ss_pred chhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCcccccccccc
Q 007200 86 VSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTNVN 165 (613)
Q Consensus 86 ~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 165 (613)
..+|.++..|+.+.+.++..+ .-..+|.++++|+.+.+. +.++......|.++.+|+.++|..| ++.....+|.++.
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred cceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 345555666666666544332 334455555566665554 3343233345555556666555543 3323344555555
Q ss_pred chhhhhhcCCCcccCCCCC-CCCCccccccccCC
Q 007200 166 SLQVLDLSNNKLTGDIPTN-GSFSLFTPISFANN 198 (613)
Q Consensus 166 ~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~N 198 (613)
+|+.+.|..+ ++.+.... ..+++|+.+.+.+|
T Consensus 335 ~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 335 QLERIAIPSS-VTKIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp TCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSC
T ss_pred CCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCc
Confidence 5555555433 33332222 34455555555544
No 428
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.25 E-value=0.0012 Score=65.98 Aligned_cols=159 Identities=11% Similarity=0.079 Sum_probs=87.1
Q ss_pred cCHHHHHHHhhCCCCC-----CccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCc--ccee
Q 007200 278 FSLRELQVATDNFSNR-----NILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN--LLRL 350 (613)
Q Consensus 278 ~~~~~~~~~~~~~~~~-----~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l 350 (613)
++.+++......|... +.|+.|....+|+....+| .+++|+...... ...+..|..++..+.... +.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~~---~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRVE---KNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCCC---HHHHHHHHHHHHHHHHCCCCCCcc
Confidence 4455555555556542 3466788889999987655 688998865311 123456777776664222 2333
Q ss_pred eEE------EEcCCceEEEEecccCCcchh--------------hhhccCCC--CC---CC---CHHHHHH---------
Q 007200 351 RGF------CMTPTERLLVYPFMVNGSVAS--------------CLRERGQS--QP---PL---NWSVRKQ--------- 393 (613)
Q Consensus 351 ~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~--~~---~l---~~~~~~~--------- 393 (613)
+.. ....+..+++++|++|..+.. .+|..... .+ .. .|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 112345689999999876432 12221100 00 01 1222100
Q ss_pred ---HHHHHHHHHHHHHhc----CCCCeEecCCCCCceeecCCCcEEEeccccce
Q 007200 394 ---IALGAARGLAYLHDH----CDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 440 (613)
Q Consensus 394 ---i~~~i~~~L~~LH~~----~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~ 440 (613)
+...+.+.+++++.. ...+++|+|+++.||+++.++.+.++||+.+.
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 001134455555532 23479999999999999987666899999875
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.20 E-value=0.00022 Score=61.06 Aligned_cols=56 Identities=23% Similarity=0.278 Sum_probs=38.5
Q ss_pred EEEcccccCC-CCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCcccc
Q 007200 97 YLELYSNNIS-GKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLM 154 (613)
Q Consensus 97 ~L~L~~N~i~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 154 (613)
.++.++++++ ..+|..+. ++|++|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 6777888776 24554333 46777888888877655666777777777777777664
No 430
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.20 E-value=0.00041 Score=59.40 Aligned_cols=57 Identities=28% Similarity=0.293 Sum_probs=45.2
Q ss_pred EEEEcCCCCcc-cccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCC
Q 007200 72 TRVDLGNANLS-GQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLN 130 (613)
Q Consensus 72 ~~L~l~~n~l~-~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~ 130 (613)
+.++.++++|+ ..+|..+ .++|+.|+|++|+|+...++.|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 37888888887 2445433 247999999999999777778899999999999999875
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.16 E-value=0.0014 Score=65.92 Aligned_cols=144 Identities=17% Similarity=0.087 Sum_probs=72.8
Q ss_pred CccccCcCcE-EEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhccc--CccceeeEEEEcCCceEEEEecccCC
Q 007200 294 NILGRGGFGK-VYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVH--RNLLRLRGFCMTPTERLLVYPFMVNG 370 (613)
Q Consensus 294 ~~ig~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 370 (613)
+.|+.|.... +|+....+|..+++|....... ..+..|+.++..+.. -.+.+++.+..+ . -+++||++.+.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~-~-g~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG----GDTQPFVDLAQYLRNLDISAPEIYAEEHA-R-GLLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT----CCSHHHHHHHHHHHHTTCBCCCEEEEETT-T-TEEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC----ccccHHHHHHHHHHhCCCCCCceeeecCC-C-CEEEEeeCCCc
Confidence 3465565554 6677654467787876543221 123456666665542 234556665322 2 37899998776
Q ss_pred cchhhhhc---------------------cCCC-CCCCCHHHHHH--------H------------HHHHHHHHHHHHh-
Q 007200 371 SVASCLRE---------------------RGQS-QPPLNWSVRKQ--------I------------ALGAARGLAYLHD- 407 (613)
Q Consensus 371 sL~~~l~~---------------------~~~~-~~~l~~~~~~~--------i------------~~~i~~~L~~LH~- 407 (613)
.+.+++.. .... .+.++...... + ...+.+.++.+..
T Consensus 98 ~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~ 177 (333)
T 3csv_A 98 LFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSA 177 (333)
T ss_dssp BHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred chHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHh
Confidence 55433321 1100 11122211100 0 0011122233311
Q ss_pred --cCCCCeEecCCCCCceeecCC----CcEEEeccccceecC
Q 007200 408 --HCDPKIIHRDVKAANILLDEE----FEAVVGDFGLAKLMD 443 (613)
Q Consensus 408 --~~~~~ivH~Dlk~~NIll~~~----~~~kl~DfGla~~~~ 443 (613)
.....++|||+.+.||+++.+ +.+.|+||+.+..-+
T Consensus 178 ~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G~ 219 (333)
T 3csv_A 178 QLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLGH 219 (333)
T ss_dssp HCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEEC
T ss_pred cccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcCC
Confidence 123479999999999999875 689999999887543
No 432
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.12 E-value=0.0015 Score=68.24 Aligned_cols=73 Identities=14% Similarity=0.188 Sum_probs=49.6
Q ss_pred CccccCcCcEEEEEEeCC--------CCEEEEEEeccccCcccHHHHHHHHHHHhhcccCcc-ceeeEEEEcCCceEEEE
Q 007200 294 NILGRGGFGKVYKGRLTD--------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL-LRLRGFCMTPTERLLVY 364 (613)
Q Consensus 294 ~~ig~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~ 364 (613)
+.|+.|....+|+....+ ++.+++|+..... ....+..|..++..+...++ .++++.+.+ .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE---TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC---CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC---cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 467888889999998753 5789999874321 11345578888887764444 566665432 3899
Q ss_pred ecccCCcch
Q 007200 365 PFMVNGSVA 373 (613)
Q Consensus 365 e~~~~gsL~ 373 (613)
||++|.++.
T Consensus 152 e~l~G~~l~ 160 (429)
T 1nw1_A 152 EYIPSRPLS 160 (429)
T ss_dssp CCCCEEECC
T ss_pred EEeCCcccC
Confidence 999875553
No 433
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.11 E-value=0.0055 Score=61.32 Aligned_cols=142 Identities=18% Similarity=0.172 Sum_probs=81.6
Q ss_pred ccccCcCcEEEEEEeCCCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCc--cceeeEE-----EEcCCceEEEEecc
Q 007200 295 ILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN--LLRLRGF-----CMTPTERLLVYPFM 367 (613)
Q Consensus 295 ~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~-----~~~~~~~~lv~e~~ 367 (613)
.++ |....||+....+|+.+++|....... ....+..|..++..+.... +.+++.. ....+..+++|+|+
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~--~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW--TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS--CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC--CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 466 888899998877777899999864322 2345667887777664222 3444432 11234557899999
Q ss_pred cCCcchh----h----------hhccC----C-CCCCCCHHHH----HHH---------------HHHHHHHHHHHHhc-
Q 007200 368 VNGSVAS----C----------LRERG----Q-SQPPLNWSVR----KQI---------------ALGAARGLAYLHDH- 408 (613)
Q Consensus 368 ~~gsL~~----~----------l~~~~----~-~~~~l~~~~~----~~i---------------~~~i~~~L~~LH~~- 408 (613)
+|..+.. . +|... . ..+..++... ..+ ...+.+.++.+...
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8865431 0 11110 0 0111222211 001 01111223333321
Q ss_pred ---CCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 409 ---CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 409 ---~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
....++|+|+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234688999999999999 4 899999998754
No 434
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.01 E-value=0.00096 Score=68.54 Aligned_cols=111 Identities=16% Similarity=0.138 Sum_probs=66.3
Q ss_pred ccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccccCccccCcccccccc
Q 007200 84 QLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLNNNSLMGEIPRSLTN 163 (613)
Q Consensus 84 ~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 163 (613)
.....|.++..|+.+.+..+ ++..-..+|.++.+|+.+.+..+ ++......|.++.+|+.+.+.+|.++......|.+
T Consensus 231 i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~ 308 (379)
T 4h09_A 231 LGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMD 308 (379)
T ss_dssp ECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTT
T ss_pred EccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcC
Confidence 33445666667777776655 44344456667777777777543 44334456777777777777777666444556777
Q ss_pred ccchhhhhhcCCCcccCCCCC-CCCCccccccccC
Q 007200 164 VNSLQVLDLSNNKLTGDIPTN-GSFSLFTPISFAN 197 (613)
Q Consensus 164 l~~L~~L~l~~N~l~~~~~~~-~~~~~l~~l~l~~ 197 (613)
+.+|+.+.|..+ ++.+.... ..+++|+.+.+..
T Consensus 309 c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 309 CVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred CCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECC
Confidence 777777777543 44433332 3455666665543
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.01 E-value=0.00012 Score=67.06 Aligned_cols=92 Identities=17% Similarity=0.187 Sum_probs=70.1
Q ss_pred cchhhhCCCCCCEEEcccc-cCCC----CCccccccCCcCCeEeccCccCCC----CCCcccccccccccccccCccccC
Q 007200 85 LVSQLGQLTNLQYLELYSN-NISG----KVPEELGNLTNLVSLDLYLNNLNG----PIPTTLGKLSKLRFLRLNNNSLMG 155 (613)
Q Consensus 85 ~~~~~~~l~~L~~L~L~~N-~i~~----~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~ 155 (613)
+...+.+-+.|+.|+|++| .|.. .+.+++..-+.|+.|+|++|+|.. .+.+.+..-+.|+.|+|++|.|..
T Consensus 33 l~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~ 112 (197)
T 1pgv_A 33 INRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTP 112 (197)
T ss_dssp HHHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCH
T ss_pred HHHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCH
Confidence 3445566788999999986 8763 245667788999999999999983 344556677899999999999985
Q ss_pred c----cccccccccchhhhhhcCCC
Q 007200 156 E----IPRSLTNVNSLQVLDLSNNK 176 (613)
Q Consensus 156 ~----~~~~~~~l~~L~~L~l~~N~ 176 (613)
. +-+.+..-+.|+.|+|++|.
T Consensus 113 ~Ga~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 113 ELLARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHHHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHHHHHHHHhhCCceeEEECCCCc
Confidence 3 34456666779999998653
No 436
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.00 E-value=0.0011 Score=68.21 Aligned_cols=108 Identities=14% Similarity=0.120 Sum_probs=85.3
Q ss_pred CCeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCcccccccccccccc
Q 007200 69 NSVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRL 148 (613)
Q Consensus 69 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 148 (613)
..++.+.+..+ ++..-...|.++.+|+.+.+..+ ++..-..+|.++++|+.+.|.+|.++..-...|.++.+|+.+.|
T Consensus 240 ~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 240 KALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp SSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred ccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 35777777654 66555678899999999999765 55455668999999999999999998666788999999999999
Q ss_pred cCccccCccccccccccchhhhhhcCCCcccC
Q 007200 149 NNNSLMGEIPRSLTNVNSLQVLDLSNNKLTGD 180 (613)
Q Consensus 149 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 180 (613)
..+ ++.....+|.++++|+.+.+..| ++.+
T Consensus 318 p~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I 347 (379)
T 4h09_A 318 PTA-LKTIQVYAFKNCKALSTISYPKS-ITLI 347 (379)
T ss_dssp CTT-CCEECTTTTTTCTTCCCCCCCTT-CCEE
T ss_pred Ccc-ccEEHHHHhhCCCCCCEEEECCc-cCEE
Confidence 865 66455678999999999988654 4433
No 437
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.97 E-value=0.0045 Score=63.27 Aligned_cols=142 Identities=13% Similarity=0.103 Sum_probs=84.0
Q ss_pred CccccCcCcEEEEEEeC--------CCCEEEEEEeccccCcccHHHHHHHHHHHhhcccCc-cceeeEEEEcCCceEEEE
Q 007200 294 NILGRGGFGKVYKGRLT--------DGSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN-LLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 294 ~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 364 (613)
+.|..|-...+|+.... +++.+++|+.... ......+.+|..+++.+.-.+ ..++++++.+ .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45777888899999864 2478999986321 123456678999988775333 3556665533 3999
Q ss_pred ecccCCcchhh-----------------hhccCC-CCCCC--CHHHHHHHHHHHHH-------------------HHHHH
Q 007200 365 PFMVNGSVASC-----------------LRERGQ-SQPPL--NWSVRKQIALGAAR-------------------GLAYL 405 (613)
Q Consensus 365 e~~~~gsL~~~-----------------l~~~~~-~~~~l--~~~~~~~i~~~i~~-------------------~L~~L 405 (613)
||++|.++..- +|.... ...+. -+..+.++..++.. .++.|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998766421 111111 01112 24555555544321 23333
Q ss_pred Hhc-----CCCCeEecCCCCCceeecCC----CcEEEecccccee
Q 007200 406 HDH-----CDPKIIHRDVKAANILLDEE----FEAVVGDFGLAKL 441 (613)
Q Consensus 406 H~~-----~~~~ivH~Dlk~~NIll~~~----~~~kl~DfGla~~ 441 (613)
.+. ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 321 12368899999999999876 7899999998863
No 438
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=96.93 E-value=0.00074 Score=69.87 Aligned_cols=124 Identities=12% Similarity=0.123 Sum_probs=82.5
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccccc
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLN 149 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 149 (613)
.++.+.+.++-.+ .....|.++++|+.+.+. +.++..-..+|.++.+|+.++|..| ++..-...|.+|.+|+.+.|.
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 4566666544332 445678888999999986 4565455678899999999999765 654556789999999999997
Q ss_pred CccccCccccccccccchhhhhhcCCCcccCCCCCCCCCccccccccCCC
Q 007200 150 NNSLMGEIPRSLTNVNSLQVLDLSNNKLTGDIPTNGSFSLFTPISFANNQ 199 (613)
Q Consensus 150 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~l~~l~l~~N~ 199 (613)
.+ ++..-..+|.++++|+.+++.+|.... ......+.|+.+.+..|.
T Consensus 343 ~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 343 SS-VTKIPESAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp TT-CCBCCGGGGTTCTTCCEEEESSCHHHH--HTCBCCCCC---------
T ss_pred cc-cCEEhHhHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEEeCCCC
Confidence 55 664556788899999999998876542 223445666766665553
No 439
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.84 E-value=0.0081 Score=60.57 Aligned_cols=32 Identities=25% Similarity=0.336 Sum_probs=28.2
Q ss_pred CCeEecCCCCCceeecCCCcEEEeccccceec
Q 007200 411 PKIIHRDVKAANILLDEEFEAVVGDFGLAKLM 442 (613)
Q Consensus 411 ~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~ 442 (613)
..++|+|+.+.||+++.++.+.++||+.+...
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~~ 237 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPMLA 237 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCeeC
Confidence 47999999999999998888999999887643
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.81 E-value=0.0046 Score=63.16 Aligned_cols=73 Identities=8% Similarity=0.040 Sum_probs=44.2
Q ss_pred CccccCcCcEEEEEEeCC---------CCEEEEEEeccccCcccHHHHHHHHHHHhhcccCc-cceeeEEEEcCCceEEE
Q 007200 294 NILGRGGFGKVYKGRLTD---------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN-LLRLRGFCMTPTERLLV 363 (613)
Q Consensus 294 ~~ig~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv 363 (613)
+.++.|....+|+....+ +..+++|+....... ......|..++..+...+ +.++++.. + -++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~--~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE--LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG--TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc--eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEE
Confidence 457788889999998753 268888876543211 112457888887775434 34666543 2 3789
Q ss_pred EecccCCcc
Q 007200 364 YPFMVNGSV 372 (613)
Q Consensus 364 ~e~~~~gsL 372 (613)
|||++|..+
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999988654
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.75 E-value=0.002 Score=66.52 Aligned_cols=55 Identities=13% Similarity=0.077 Sum_probs=29.9
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccC
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYL 126 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~ 126 (613)
+|+.+.|.+ +++.+-..+|.++++|+.++|.+| ++..-..+|.++.+|+.+.+..
T Consensus 72 ~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~ 126 (394)
T 4fs7_A 72 KVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPL 126 (394)
T ss_dssp TEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCT
T ss_pred CceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccC
Confidence 566666653 355444455666666666666544 3323344566666666555543
No 442
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=96.62 E-value=0.0023 Score=66.16 Aligned_cols=55 Identities=13% Similarity=0.044 Sum_probs=25.6
Q ss_pred CeEEEEcCCCCcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccC
Q 007200 70 SVTRVDLGNANLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYL 126 (613)
Q Consensus 70 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~ 126 (613)
.++.+.+.++ ++......+.++..|+.+.+..|... .....|..+..|+.+.+..
T Consensus 231 ~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~ 285 (394)
T 4fs7_A 231 GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGS 285 (394)
T ss_dssp CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECS
T ss_pred CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCc
Confidence 4555555432 23233345556666666666555433 3333344444444444433
No 443
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.53 E-value=0.0092 Score=62.68 Aligned_cols=74 Identities=11% Similarity=0.109 Sum_probs=47.6
Q ss_pred CccccCcCcEEEEEEeCC-CCEEEEEEeccccCcccHHHHHHHHHHHhhcccCcc-ceeeEEEEcCCceEEEEecccCCc
Q 007200 294 NILGRGGFGKVYKGRLTD-GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNL-LRLRGFCMTPTERLLVYPFMVNGS 371 (613)
Q Consensus 294 ~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~gs 371 (613)
+.|+.|-...+|+....+ +..+++|+..... . ......+|..++..+...++ .++++++. + .+||||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~-~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-D-EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-C-SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-h-hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 467888889999998764 4788898774322 1 11123578888888865444 46666652 2 35999998866
Q ss_pred ch
Q 007200 372 VA 373 (613)
Q Consensus 372 L~ 373 (613)
+.
T Consensus 188 l~ 189 (458)
T 2qg7_A 188 LS 189 (458)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.25 E-value=0.012 Score=54.30 Aligned_cols=102 Identities=16% Similarity=0.090 Sum_probs=64.7
Q ss_pred CcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeecCCCcEEEeccccceecCCCCCce
Q 007200 370 GSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHV 449 (613)
Q Consensus 370 gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~~~~~~~~~ 449 (613)
-+|.+.|...+. |+++.+++.++.|.+.+|.-+-... .-..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~~~~~---PlsEEqaWALc~Qc~~~L~~~~~~~--~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------- 97 (229)
T 2yle_A 33 LSLEEILRLYNQ---PINEEQAWAVCYQCCGSLRAAARRR--QPRHRVRSAAQIRVWRDGAVTLAP-AADD--------- 97 (229)
T ss_dssp EEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHTT--CCCCCCCSGGGEEEETTSCEEECC-C------------
T ss_pred ccHHHHHHHcCC---CcCHHHHHHHHHHHHHHHHhhhhcc--cCCceecCCcceEEecCCceeccc-cccc---------
Confidence 478888887654 5999999999999999887662211 111233456889999999988763 1110
Q ss_pred eeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCC
Q 007200 450 TTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQR 491 (613)
Q Consensus 450 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~ 491 (613)
.....+.|||... ...+.+.=|||+|+++|..+-=..
T Consensus 98 ----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL 134 (229)
T 2yle_A 98 ----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGL 134 (229)
T ss_dssp -------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTC
T ss_pred ----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCC
Confidence 0223456888753 344567789999999998875333
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.52 E-value=0.039 Score=57.19 Aligned_cols=141 Identities=9% Similarity=0.076 Sum_probs=84.6
Q ss_pred CccccCcCcEEEEEEeCC--------CCEEEEEEeccccCcccHHHHHHHHHHHhhcccCc-cceeeEEEEcCCceEEEE
Q 007200 294 NILGRGGFGKVYKGRLTD--------GSLVAVKRLKEERTQGGELQFQTEVEMISMAVHRN-LLRLRGFCMTPTERLLVY 364 (613)
Q Consensus 294 ~~ig~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~ 364 (613)
+.+..|-...+|+....+ ++.+++|+..... . ......+|..+++.+...+ ..++++.+ .-++||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t-~-~~idR~~E~~~l~~L~~~gi~P~l~~~~----~~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV-G-KFYDSKVELDVFRYLSNINIAPNIIADF----PEGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc-c-hhcCHHHHHHHHHHHHhcCCCCCEEEEc----CCCEEE
Confidence 457778889999998763 5789999864322 1 1123457888887775333 34555433 237899
Q ss_pred ecccCCcchhh-----------------hhcc-------CC--CCCCCCHHHHHHHHHHH-------------------H
Q 007200 365 PFMVNGSVASC-----------------LRER-------GQ--SQPPLNWSVRKQIALGA-------------------A 399 (613)
Q Consensus 365 e~~~~gsL~~~-----------------l~~~-------~~--~~~~l~~~~~~~i~~~i-------------------~ 399 (613)
+|++|.+|..- +|.. .. ...+.-+..+..+..++ .
T Consensus 150 efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 229 (424)
T 3mes_A 150 EFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKIL 229 (424)
T ss_dssp ECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHH
T ss_pred EEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHH
Confidence 99998765321 1111 00 11222345444444332 1
Q ss_pred HHHHHHHhc---------------------CCCCeEecCCCCCceeecCCCcEEEecccccee
Q 007200 400 RGLAYLHDH---------------------CDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL 441 (613)
Q Consensus 400 ~~L~~LH~~---------------------~~~~ivH~Dlk~~NIll~~~~~~kl~DfGla~~ 441 (613)
..+++|.+. .+..++|+|+.+.||+ +.++.+.++||..+..
T Consensus 230 ~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 230 EEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 223333211 1236889999999999 7788999999998863
No 446
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.19 E-value=0.096 Score=53.67 Aligned_cols=143 Identities=15% Similarity=0.139 Sum_probs=81.4
Q ss_pred CccccCcCcEEEEEEeCC--------CCEEEEEEeccccCc----------ccH-------HHHHHHHHHHhhcccC-cc
Q 007200 294 NILGRGGFGKVYKGRLTD--------GSLVAVKRLKEERTQ----------GGE-------LQFQTEVEMISMAVHR-NL 347 (613)
Q Consensus 294 ~~ig~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~----------~~~-------~~~~~e~~~l~~l~h~-ni 347 (613)
+.|..|-...+|+....+ ++.|.+++.-..... -.+ .....|..+++.+... -.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667788999988653 367888876332110 000 1223488888877533 34
Q ss_pred ceeeEEEEcCCceEEEEecccCCcchhh-----------------hhccCC--CCCCC-CHHHHHHHHHHHH--------
Q 007200 348 LRLRGFCMTPTERLLVYPFMVNGSVASC-----------------LRERGQ--SQPPL-NWSVRKQIALGAA-------- 399 (613)
Q Consensus 348 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~~~--~~~~l-~~~~~~~i~~~i~-------- 399 (613)
.++++++.+ .+|+||++|-+|..- +|.... ...+. -+..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 566666532 289999997665321 111111 11111 2334444443321
Q ss_pred --------------HHHHH----HHhc-CCCCeEecCCCCCceeecCC------CcEEEeccccce
Q 007200 400 --------------RGLAY----LHDH-CDPKIIHRDVKAANILLDEE------FEAVVGDFGLAK 440 (613)
Q Consensus 400 --------------~~L~~----LH~~-~~~~ivH~Dlk~~NIll~~~------~~~kl~DfGla~ 440 (613)
.-+.. |... .+..++|+|+.+.||+++.+ +.+.++||..+.
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 11222 2221 22368899999999999887 789999999885
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=92.05 E-value=0.66 Score=47.58 Aligned_cols=30 Identities=30% Similarity=0.453 Sum_probs=25.2
Q ss_pred CeEecCCCCCceee------cCCCcEEEecccccee
Q 007200 412 KIIHRDVKAANILL------DEEFEAVVGDFGLAKL 441 (613)
Q Consensus 412 ~ivH~Dlk~~NIll------~~~~~~kl~DfGla~~ 441 (613)
.++|+|+.+.||++ +++..+.++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 35799999999999 4567799999998864
No 448
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=90.41 E-value=0.58 Score=43.00 Aligned_cols=117 Identities=8% Similarity=0.063 Sum_probs=79.5
Q ss_pred cccCccceeeEEEEcCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 007200 342 AVHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDPKIIHRDVKAA 421 (613)
Q Consensus 342 l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~~ivH~Dlk~~ 421 (613)
..||+++.. .+-.+++...+.++.-..+.=...++. ++...+++++.+|+....+++.. +|--|+|+
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~-------~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKS-------FTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGG-------SCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHh-------cCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 358888866 455666666666665443322223332 77899999999998877666654 78999999
Q ss_pred ceeecCCCcEEEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcc
Q 007200 422 NILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 494 (613)
Q Consensus 422 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~ 494 (613)
||+++.++.+++.-.|+...+.+.. +.+|. =.-.+=+++..+++++..|+
T Consensus 109 NL~f~~~~~p~i~~RGik~~l~P~~-------------~~ee~----------fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVVDPLP-------------VSEAE----------FLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp GEEECTTSCEEESCCEETTTBSCCC-------------CCHHH----------HHHHHHHHHHHHHCTTCCHH
T ss_pred eEEEcCCCCEEEEEccCccCCCCCC-------------CCHHH----------HHHHHHHHHHHHHcCCCCHH
Confidence 9999999999998777653322110 01121 13345678889999999985
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=90.18 E-value=0.2 Score=32.97 Aligned_cols=33 Identities=21% Similarity=0.218 Sum_probs=22.3
Q ss_pred CCcccccccchhhHHHhhhhhhHHHHhhccCCC
Q 007200 224 ATGAIAGGVAAGAALLFAAPAIALAYWRKRKPE 256 (613)
Q Consensus 224 ~~~~~~~~v~~~~~~l~~~~~~~~~~~r~rk~~ 256 (613)
....+++++.++.+.++++....++++|+|+.+
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~~ 41 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRRRHIV 41 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhhhHhh
Confidence 345577777777777766666667777776654
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=90.02 E-value=0.83 Score=42.11 Aligned_cols=115 Identities=16% Similarity=0.148 Sum_probs=78.1
Q ss_pred ccCccceeeEEEEcCCceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCCC
Q 007200 343 VHRNLLRLRGFCMTPTERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLA-YLHDHCDPKIIHRDVKAA 421 (613)
Q Consensus 343 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~-~LH~~~~~~ivH~Dlk~~ 421 (613)
.||++ -..+-.+++...+.++.-+++.-...++. ++...+++++.+|+.... +++.. +|--|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-------~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-------TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-------SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-------cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 57777 44555677777777776544443444432 778999999999887666 55544 88899999
Q ss_pred ceeecCCCcEEEeccccceecCCCCCceeeccccccccccccccccCCCCCcccchhHHHHHHHHHhCCCCcc
Q 007200 422 NILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 494 (613)
Q Consensus 422 NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~G~il~elltg~~p~~ 494 (613)
||+++.++.+++.-.|+-..+++.. +.+|.+ .-.+=+++..++.++..|+
T Consensus 114 NL~f~~~~~p~i~hRGi~~~lpP~e-------------~~ee~f----------l~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 114 NLMFNRALEPFFLHVGVKESLPPDE-------------WDDERL----------LREVKATVLALTEGEYRFD 163 (219)
T ss_dssp GEEECTTCCEEESCCEETTTBSSCS-------------CCHHHH----------HHHHHHHHHHHTTCSSCHH
T ss_pred eEEEeCCCcEEEEEcCCcccCCCCC-------------CCHHHH----------HHHHHHHHHHHHcCCCCHH
Confidence 9999999999998777653322111 112221 2345678888999988885
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=88.39 E-value=0.23 Score=32.66 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=23.0
Q ss_pred CCcccccccchhhHHHhhhhhhHHHHhhccCCCC
Q 007200 224 ATGAIAGGVAAGAALLFAAPAIALAYWRKRKPED 257 (613)
Q Consensus 224 ~~~~~~~~v~~~~~~l~~~~~~~~~~~r~rk~~~ 257 (613)
....+++++.++.+.++++....++++|+|+...
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~~ 41 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIKK 41 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSC
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 3456777777777777766666677777766543
No 452
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=75.33 E-value=0.42 Score=50.06 Aligned_cols=62 Identities=5% Similarity=0.017 Sum_probs=18.5
Q ss_pred CCCccccCcCcEEEEEEeCC-CCEEEE------EEeccccC-cccHHHHHHHHHHHhhcccCccceeeEEEEc
Q 007200 292 NRNILGRGGFGKVYKGRLTD-GSLVAV------KRLKEERT-QGGELQFQTEVEMISMAVHRNLLRLRGFCMT 356 (613)
Q Consensus 292 ~~~~ig~G~~g~V~~~~~~~-~~~vav------K~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 356 (613)
..+.+| ||.||+|.+.. ..+||| |..+.... ......+.+|..++...+|+|+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 345666 99999999863 367888 76654322 2223457788888888999999999998653
No 453
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=60.40 E-value=3.8 Score=26.00 Aligned_cols=29 Identities=14% Similarity=-0.075 Sum_probs=12.4
Q ss_pred CcccccccchhhHHHhhhhhhHHHHhhcc
Q 007200 225 TGAIAGGVAAGAALLFAAPAIALAYWRKR 253 (613)
Q Consensus 225 ~~~~~~~v~~~~~~l~~~~~~~~~~~r~r 253 (613)
.+.+++.+.+..+.+.++..+.+++||+|
T Consensus 10 ~GaIAGiVvG~v~gv~li~~l~~~~~rrr 38 (38)
T 2k1k_A 10 GGEIVAVIFGLLLGAALLLGILVFRSRRA 38 (38)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCceeeeehHHHHHHHHHHHHHHHHeecC
Confidence 33444444333333333444445555543
No 454
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=55.65 E-value=4.2 Score=26.61 Aligned_cols=28 Identities=14% Similarity=0.190 Sum_probs=12.8
Q ss_pred cccccchhhHHHhhhhhhHHHHhhccCCC
Q 007200 228 IAGGVAAGAALLFAAPAIALAYWRKRKPE 256 (613)
Q Consensus 228 ~~~~v~~~~~~l~~~~~~~~~~~r~rk~~ 256 (613)
+++++.+ ...++++......++|+|+..
T Consensus 14 Ia~~vVG-vll~vi~~l~~~~~~RRR~~~ 41 (44)
T 2jwa_A 14 IISAVVG-ILLVVVLGVVFGILIKRRQQK 41 (44)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHHHHCSC
T ss_pred hHHHHHH-HHHHHHHHHHHHhheehhhhh
Confidence 4444444 333444444444555655543
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=50.22 E-value=24 Score=27.75 Aligned_cols=47 Identities=19% Similarity=0.042 Sum_probs=27.3
Q ss_pred CcccccchhhhCCCCCCEEEcccccCCCCCccccccCCcCCeEeccCc
Q 007200 80 NLSGQLVSQLGQLTNLQYLELYSNNISGKVPEELGNLTNLVSLDLYLN 127 (613)
Q Consensus 80 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~p~~~~~l~~L~~L~Ls~N 127 (613)
+++.+-...|.++++|+.+.|..+ ++.+-..+|.++.+|+.+.|...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 344444456666677777666654 33344456666666666666543
No 456
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=46.99 E-value=9.2 Score=24.50 Aligned_cols=26 Identities=35% Similarity=0.635 Sum_probs=10.6
Q ss_pred ccccccchhhHHHhhhhhhHHHHhhc
Q 007200 227 AIAGGVAAGAALLFAAPAIALAYWRK 252 (613)
Q Consensus 227 ~~~~~v~~~~~~l~~~~~~~~~~~r~ 252 (613)
.+++++..+..++.++....+.++|+
T Consensus 14 ~I~~~vv~Gv~ll~~iv~~~~~~~rR 39 (41)
T 2k9y_A 14 AVIGGVAVGVVLLLVLAGVGFFIHRR 39 (41)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSSS
T ss_pred EEEeehhHHHHHHHHHHHHheeEeee
Confidence 34444444444433233333334443
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=46.38 E-value=20 Score=28.21 Aligned_cols=44 Identities=14% Similarity=0.065 Sum_probs=19.5
Q ss_pred CCCCCccccccCCcCCeEeccCccCCCCCCccccccccccccccc
Q 007200 105 ISGKVPEELGNLTNLVSLDLYLNNLNGPIPTTLGKLSKLRFLRLN 149 (613)
Q Consensus 105 i~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 149 (613)
++.+-..+|.++++|+.+.|-.+ ++.+-...|.+|.+|+.+.|.
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 34333444555555555555433 222223344444444444443
No 458
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=29.41 E-value=1.2e+02 Score=29.64 Aligned_cols=79 Identities=18% Similarity=0.159 Sum_probs=45.1
Q ss_pred ceEEEEecccCCcchhhhhccCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeE-ecCCCCCceeecCCCc-EEEec
Q 007200 359 ERLLVYPFMVNGSVASCLRERGQSQPPLNWSVRKQIALGAARGLAYLHDHCDP-KII-HRDVKAANILLDEEFE-AVVGD 435 (613)
Q Consensus 359 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~LH~~~~~-~iv-H~Dlk~~NIll~~~~~-~kl~D 435 (613)
..+++|+|.+|..|.+.-..... ..+.......+.. +-+++++..+.+. +.+ +..=.+.|||++.++. +.++|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~--~~f~~~~~k~LG~--Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAP--EVLTKSTMQQLGS--LMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHH--HHSCHHHHHHHHH--HHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhhhh--hhcCHHHHHhhch--hheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 45699999998776654321100 0133333332211 2356777766543 121 1224789999987554 88999
Q ss_pred ccccee
Q 007200 436 FGLAKL 441 (613)
Q Consensus 436 fGla~~ 441 (613)
-+++..
T Consensus 232 hn~af~ 237 (342)
T 1cja_A 232 SKIIPL 237 (342)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 998854
No 459
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=25.79 E-value=15 Score=22.65 Aligned_cols=26 Identities=15% Similarity=0.243 Sum_probs=11.4
Q ss_pred cccccchhhHHHhhhhhhHHHHhhccC
Q 007200 228 IAGGVAAGAALLFAAPAIALAYWRKRK 254 (613)
Q Consensus 228 ~~~~v~~~~~~l~~~~~~~~~~~r~rk 254 (613)
+++++.+ ....+++......++|+|+
T Consensus 10 IaagVvg-lll~vii~l~~~~~iRRr~ 35 (35)
T 1iij_A 10 IIATVVG-VLLFLILVVVVGILIKRRR 35 (35)
T ss_dssp HHHHHHH-HHHHHHHTTTTTHHHHHCC
T ss_pred eHHHHHH-HHHHHHHHHHhheEEeecC
Confidence 3344443 3333333344445566553
No 460
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=20.73 E-value=21 Score=21.63 Aligned_cols=24 Identities=33% Similarity=0.663 Sum_probs=14.5
Q ss_pred cchhhHHHhhhhhhHHHHhhccCC
Q 007200 232 VAAGAALLFAAPAIALAYWRKRKP 255 (613)
Q Consensus 232 v~~~~~~l~~~~~~~~~~~r~rk~ 255 (613)
+..+.++++......+.|||.|+-
T Consensus 12 ~i~gl~vif~~lg~tflywrgrrh 35 (40)
T 2l9u_A 12 VIAGLVVIFMMLGGTFLYWRGRRH 35 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCceeEEEccccc
Confidence 344555555555566778887653
Done!