Query 007204
Match_columns 613
No_of_seqs 168 out of 1139
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 19:49:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007204.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007204hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2rdy_A BH0842 protein; PSI-II, 100.0 6E-121 2E-125 1063.1 62.7 568 12-600 2-581 (803)
2 2eab_A Alpha-fucosidase; glyco 100.0 2E-120 8E-125 1058.7 45.6 547 11-598 16-658 (899)
3 1h54_A Maltose phosphorylase; 100.0 1.6E-53 5.5E-58 492.4 34.4 396 121-598 106-569 (754)
4 1v7w_A Chitobiose phosphorylas 98.0 0.0021 7.2E-08 74.8 29.2 104 463-580 424-539 (807)
5 2okx_A Rhamnosidase B; alpha b 97.7 4.9E-05 1.7E-09 90.3 8.4 187 346-579 543-732 (956)
6 3cih_A Putative alpha-rhamnosi 96.4 0.0074 2.5E-07 69.7 9.8 100 467-580 386-491 (739)
7 3rrs_A Cellobiose phosphorylas 96.1 0.11 3.7E-06 60.6 17.1 109 464-580 421-556 (822)
8 3qde_A Cellobiose phosphorylas 96.0 0.17 5.8E-06 58.9 18.1 109 464-580 414-549 (811)
9 3c68_A Uncharacterized protein 95.5 0.035 1.2E-06 64.2 9.7 45 468-513 394-438 (761)
10 2p0v_A Hypothetical protein BT 92.7 0.17 5.8E-06 54.8 7.1 111 467-580 182-313 (489)
11 2z07_A Putative uncharacterize 92.2 0.33 1.1E-05 51.7 8.6 44 469-513 106-153 (420)
12 2ahf_A Unsaturated glucuronyl 91.0 1.9 6.4E-05 45.5 12.7 41 461-506 217-257 (377)
13 1ulv_A Glucodextranase; GH fam 90.7 33 0.0011 40.8 29.4 130 405-580 343-474 (1020)
14 2zzr_A Unsaturated glucuronyl 87.3 3.2 0.00011 44.0 11.2 40 462-506 243-282 (397)
15 2vn4_A Glucoamylase; hydrolase 83.9 4.7 0.00016 45.1 11.0 132 405-564 68-209 (599)
16 1lf6_A Glucoamylase; (alpha/al 79.8 85 0.0029 35.3 26.3 69 491-580 413-482 (684)
17 2jg0_A Periplasmic trehalase; 64.4 13 0.00046 40.7 8.0 33 472-506 183-215 (535)
18 1gai_A Glucoamylase-471; hydro 61.3 13 0.00043 40.3 6.9 76 468-564 133-208 (472)
19 3k11_A Putative glycosyl hydro 51.9 95 0.0032 33.2 11.7 57 461-519 262-318 (445)
20 3pmm_A Putative cytoplasmic pr 50.9 1.1E+02 0.0039 31.7 12.0 85 424-518 197-286 (382)
21 2fba_A Glucoamylase Glu1; (alp 48.3 17 0.00056 39.6 5.1 93 466-579 146-253 (492)
22 2zbl_A Putative isomerase; N-a 46.5 47 0.0016 34.8 8.3 89 467-578 113-203 (421)
23 3p2c_A Putative glycosyl hydro 39.7 20 0.00067 38.5 3.9 111 467-579 165-294 (463)
24 2gz6_A N-acetyl-D-glucosamine 34.7 96 0.0033 31.7 8.3 96 466-579 173-270 (388)
25 2ww2_A Mannosidase, alpha-1,2- 33.6 2E+02 0.0069 32.7 11.2 48 252-311 229-277 (737)
26 1g9g_A Cellulase CEL48F; proce 32.5 1.5E+02 0.0051 32.2 9.1 133 435-580 365-529 (629)
27 2zzr_A Unsaturated glucuronyl 31.5 65 0.0022 33.9 6.3 20 469-488 72-91 (397)
28 2wvx_A Mannosidase, putative a 31.4 2.8E+02 0.0094 31.6 11.8 49 251-311 225-273 (744)
29 1nc5_A Hypothetical protein YT 29.6 1.5E+02 0.005 30.5 8.6 54 461-515 209-262 (373)
30 3gt5_A N-acetylglucosamine 2-e 28.9 1E+02 0.0036 31.9 7.4 104 467-594 115-221 (402)
31 3qt9_A Putative uncharacterize 28.4 26 0.00088 37.3 2.5 110 467-579 137-266 (427)
32 2xsg_A Ccman5; hydrolase, mann 28.0 4.1E+02 0.014 30.4 12.4 48 252-311 248-296 (774)
33 3k7x_A LIN0763 protein; Q92DQ0 26.4 54 0.0018 33.7 4.5 39 459-504 42-80 (349)
34 3gt5_A N-acetylglucosamine 2-e 25.5 2.5E+02 0.0085 28.9 9.6 100 468-578 176-279 (402)
35 2l7y_A Putative endo-beta-N-ac 22.1 56 0.0019 27.4 2.9 50 126-179 23-72 (98)
36 3k7x_A LIN0763 protein; Q92DQ0 21.1 78 0.0027 32.5 4.5 39 462-501 210-248 (349)
No 1
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=100.00 E-value=5.5e-121 Score=1063.10 Aligned_cols=568 Identities=42% Similarity=0.764 Sum_probs=506.6
Q ss_pred CceEEEcCCCCCccccccccCCcceeeecCCCCcceEEeeccccccCCCCCCCCCCchhhHHHHHHHHhcCChHHHHHHH
Q 007204 12 PLKITFNGPAKHFTDAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTNPDAPKALSDVRSLVDSGQYAEATAAS 91 (613)
Q Consensus 12 ~~~l~y~~PA~~W~ealpiGNGrlGamv~G~~~~e~i~lNe~tlWsg~p~~~~~~~~~~~l~~iR~ll~~g~~~~A~~l~ 91 (613)
+++|||++||+.|+||||||||||||||||++.+|+|||||+|||+|+|.++.||++.+.|++||+++++|++.+|++++
T Consensus 2 ~~~lwy~~Pa~~w~eaLpiGNG~lGamv~G~~~~e~i~lne~tlW~g~p~~~~~~~~~~~l~~ir~~~~~g~~~~A~~l~ 81 (803)
T 2rdy_A 2 SLKIQFDFPASFWTEALPIGNGNLGAMVFGKVEKERIALNEDTLWSGYPKDWNNPKAKEVLPKVRELIAQEKYEEADQLS 81 (803)
T ss_dssp -CEEEESSCCSSGGGSEEEECSSEEEEECCCSSEEEEEEEETTCBSSCSCCCCCHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CcceEeCCcccchhhhceecCCceeEEecCCCCeEEEEEcCCccCcCCCCCCCCcchHHHHHHHHHHHHCCChHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HhhcCCCCCCCccceEEEEEecCCCCccCCCCeEEEeeccccEEEEEEEeCCEEEEEEEEeecCCCEEEEEEEeCCCCce
Q 007204 92 VKLFGHPADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSL 171 (613)
Q Consensus 92 ~~~~g~~~~~y~~~g~L~l~~~~~~~~~~~~~Y~R~LDl~~a~~~v~~~~~g~~~~re~F~S~pd~viv~~i~a~~~~~l 171 (613)
+.|+|+..++|||+|+|.|+|.+.... +++|+|+|||++|+++|+|+.+|++|+|++|||+||+|||+||++++++++
T Consensus 82 ~~~~~~~~~~y~~lG~l~l~~~~~~~~--~~~y~r~LDl~~a~~~~~~~~~g~~~~re~f~s~~d~viv~~l~a~~~~~~ 159 (803)
T 2rdy_A 82 RDMMGPYTQSYLPFGDLNIFMDHGQVV--APHYHRELDLSTGIVTVTYTIGGVQYTRELFVTYPDRAIVVRLTASKEGFL 159 (803)
T ss_dssp TTSCCCCCCCBCCCEEEEEEESSCSCC--CSCCEEEEETTTTEEEEEEEETTEEEEEEEEEETTTTEEEEEEEESSTTCE
T ss_pred HHhccCCCCCccccEEEEEecCCCCCC--ccceeEEEEccceEEEEEEEECCEEEEEEEEEecCCCEEEEEEecCCCCcE
Confidence 556787888999999999999643213 569999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeccCCCCcccccCCCeEEEEeecCCCCCCCCC--------CCCCCCCCceEEEEEEEEEeCCCeeEEEecCCeEE
Q 007204 172 SFNVSLDSLLDNHSYVNGNNQIIMEGRCPGKRIPPKA--------NANDDPKGIQFSAILEIKISDDRGTISALEDKKLK 243 (613)
Q Consensus 172 ~~~~~l~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~--------~~~~~~~g~~f~~~~~v~~~g~~G~v~~~~~~~i~ 243 (613)
+|+++|.++......+ +++.+++.|+.+....+.+. ......+|++|+++++|+..| |+++. .+++|+
T Consensus 160 ~~~~~l~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~v~~~g--g~~~~-~~~~l~ 235 (803)
T 2rdy_A 160 SFRAKLDSLLRHVSSV-GAEHYTISGTAPEHVSPSYYDEENPVRYGHPDMSQGMTFHGRLAAVNEG--GSLKV-DADGLH 235 (803)
T ss_dssp EEEEEEECSSCCEEEC---CCEEEEEECCSEECCTTCCCSSCEECCCTTTCCSCEEEEEEEEEEES--SEEEE-ETTEEE
T ss_pred EEEEEeccCCCCceee-cCCEEEEEEEcCCCCccccccccccccccccCCCCCeEEEEEEEEEeCC--cEEEe-cCCEEE
Confidence 9999999876544333 45678899988653211000 011234789999999997666 78876 455899
Q ss_pred EeCCcEEEEEEEEeecCCCCCCCCCCCCCChHHHHHHHHHHhhcCCHHHHHHHHHHHHHhhhccceEEecCCCCCccccc
Q 007204 244 VEGSDWAVLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDT 323 (613)
Q Consensus 244 v~~a~~v~i~~~~~t~y~~~~~~~~~~~~d~~~~~~~~l~~a~~~~y~~l~~~H~~~~~~l~~r~~l~L~~~~~~~~~~~ 323 (613)
|++|++|+|++++.|+|+...+ ..+.+.||.+.|.+.|+.|..++|++|+++|+++|++||+|++|+|++++.
T Consensus 236 v~~a~~~~l~~~~~T~~~~~~~-~~~~~~d~~~~a~~~l~~a~~~~y~~L~~~H~~~w~~~w~r~~i~l~g~~~------ 308 (803)
T 2rdy_A 236 VMGATCATLYFSASTSFDPSTG-ASCLERDPSLRTIETIKAICKRGYKEIVNRHLEDYTKLFNRVSLHLGESIA------ 308 (803)
T ss_dssp EEEESEEEEEEEEEESEETTTT-EECTTCCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHTTCEEECCCCCS------
T ss_pred EECCcEEEEEEEEeecCCCccc-ccccCCCHHHHHHHHHHHhhhcCHHHHHHHHHHHHHHhhCceEEEeCCCcc------
Confidence 9999999999999999975311 112256899999999999988999999999999999999999999987632
Q ss_pred CCccccCCCChHHHHHhccCCCChHHHHHHHHHHHHHhhhcCCCCCCCCCCccccCCCCCCCCCCCceecccccchhccc
Q 007204 324 CSEENIDTVPSAERVKSFQTDEDPSLVELLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQS 403 (613)
Q Consensus 324 ~~~~~~~~~pt~~rl~~~~~~~d~~L~~l~f~~gRYLlisssR~g~~P~~LqGiWn~~~~~~W~~~y~~NiN~qmnyWpa 403 (613)
...+|||+|+++|+.+ ||+|++++|+|||||||||||+|++|+|||||||+++.|+|+|+||+|||+||||||+
T Consensus 309 -----~~~~~td~rl~~~~~~-d~~l~~l~~~~~rYlL~sssr~g~~P~~LqGlw~~~~~~~W~g~y~~n~N~em~ywP~ 382 (803)
T 2rdy_A 309 -----PADMSTDQRIKEYGSR-DLGLVELLFQYGRYLMIASSRPGTQPANLQGIWNEETRAPWSSNYTLNINAEMNYWPA 382 (803)
T ss_dssp -----CTTCCHHHHHHHHGGG-SHHHHHHHHHHHHHHHHHHCCTTSCCCBTTBTCCCCTTCGGGGCEETTTHHHHHTTTT
T ss_pred -----cccCChHHHHHHhccC-CHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccCCCCCCCCCCccceeehhhhhhHhhh
Confidence 3579999999999877 9999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCchHhHHHHHHHHHHhhHHHHHHHHHhcCCCCccccccCCcCCccCCC----CCCcccccCcccHHHHHHHHHHHHH
Q 007204 404 LPCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSAD----RGKVVWALWPMGGAWLCTHLWEHYN 479 (613)
Q Consensus 404 ~~~nl~E~~~pl~~~~~~l~~~gr~~A~~~yG~~G~~~~~~td~wg~t~p~----~~~~~~~~w~~g~aWla~~lw~~y~ 479 (613)
+.+|+|||++|||+|++++++.||++||++||++||++||++|+|+.+.|. .+.+.|+.||++++|+|+|+|+||+
T Consensus 383 ~~~n~pE~~~~ll~y~~~~l~~ar~~A~~~~G~~Ga~~p~~td~w~~~~p~g~~G~~~~~~~~w~~~~awla~~lw~yy~ 462 (803)
T 2rdy_A 383 ETCNLAELHKPLIHFIERLAANGKKTAEINYGARGWVAHHNADLWGQTAPVGDFGHGDPVWAFWPMGGVWLTQHLWEHYT 462 (803)
T ss_dssp TTTTCGGGGHHHHHHHHHHHHHHHHHHHHHHCCSSCCCCSEECTTCCCSCCSGGGTSCHHHHCCCCHHHHHHHHHHHHHH
T ss_pred hhcCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEeeccccccccCCccccCCCCcccccccchHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999885 2346789999999999999999999
Q ss_pred hcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeEEeCCCCCCCCcccCCCCCcceeecCchHHHHHHHHHHHHHHHHHH
Q 007204 480 YTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAE 559 (613)
Q Consensus 480 ~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~v~~Ps~SPEn~~~~~~g~~~~~~~~~t~d~~~ir~l~~~~i~a~~ 559 (613)
||+|++||++++||+|+++|+||+++++++++|+|++.|++|||+.+..| |+....+.|++||++++|++|+.++++++
T Consensus 463 ~TgD~~fL~~~~~p~l~e~A~F~~~~l~~~~~g~y~i~p~~sPE~~~~~~-g~~~~~~~n~tytn~~~~~~l~~a~~a~~ 541 (803)
T 2rdy_A 463 FGEDEAYLRDTAYPIMKEAALFCLDWLIENEAGYLVTSPSTSPEQRFRIG-EKGYAVSSATTMDLSLIAECFDNCIQAAK 541 (803)
T ss_dssp HHCCHHHHHHTHHHHHHHHHHHHHHHCEECTTSCEECSSBCBTTBCEEET-TEEECCBSCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCHHHHHhhchHHHHHHHHHHHHhhEECCCCcEEECCCCcccccccCC-CcccccccChHHHHHHHHHHHHHHHHHHH
Confidence 99999999998999999999999999998889999999999999987666 66567899999999999999999999999
Q ss_pred HhCCCChHHHHHHHHHhCCCCCCCCCCCCCccccccccccC
Q 007204 560 VLEKNEDALVEKVLKSLPRLRPTKIAEDGSIMEWVQRRLNT 600 (613)
Q Consensus 560 ~Lg~~~~~~~~~w~~~~~~L~p~~i~~~G~l~EW~~d~~~~ 600 (613)
+||++ ++++++|++++++|+||+|+++|+|+||.+|+.+.
T Consensus 542 ~Lg~~-~~~~~~w~~~~~~L~p~~i~~~G~l~ew~~d~~~~ 581 (803)
T 2rdy_A 542 RLSID-EDFVKALSDAKQRLLPLQIGKRGQLQEWSNDFEDE 581 (803)
T ss_dssp HTTCC-HHHHHHHHHHHHTBCCCCBCTTSCBCSSSSCCEES
T ss_pred HHCcC-HHHHHHHHHHHhcCCCCccCCCCceeecccccccC
Confidence 99995 56789999999999999999999999999876553
No 2
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=100.00 E-value=2.5e-120 Score=1058.74 Aligned_cols=547 Identities=27% Similarity=0.501 Sum_probs=478.8
Q ss_pred CCceEEEcCCCC------------------Ccc-ccccccCCcceeeecCCCCcceEEeeccccccCCCCCCCC------
Q 007204 11 NPLKITFNGPAK------------------HFT-DAIPIGNGRLGAMVWGGVPSETLKLNEDTLWTGVPGDYTN------ 65 (613)
Q Consensus 11 ~~~~l~y~~PA~------------------~W~-ealpiGNGrlGamv~G~~~~e~i~lNe~tlWsg~p~~~~~------ 65 (613)
++++|||++||+ .|+ ||||||||||||||||++.+|+|||||+|||+|+|.+..+
T Consensus 16 ~~~~lwy~~Pa~~~~~~~~~~~~~~~~~~~~W~~~alPiGNGrlGamv~G~~~~E~i~lNe~tlWsG~p~~~~~~~~~n~ 95 (899)
T 2eab_A 16 KDDWLWYKQPASQTDATATAGGNYGNPDNNRWQQTTLPFGNGKIGGTVWGEVSRERVTFNEETLWTGGPGSSTSYNGGNN 95 (899)
T ss_dssp TSCEEEESSCGGGSCCCSCCCTTCCSHHHHHHHHHCEEEESSSEEEEECCCSSEEEEEEEETTCBCCSTTSSSSCCTTCC
T ss_pred CCceEEeCCCCcccccccccccccccccccchhhccccccCCCeeEeccCCCCeEEEEEeccccCCCCCCCCCccccccc
Confidence 468999999998 896 8999999999999999999999999999999999976543
Q ss_pred ---CCchhhHHHHHHHHhcCChHHHHHHHHhhcCCC----CCCCccceEEEEEecCCCCccCCCCeEEEeeccccEEEEE
Q 007204 66 ---PDAPKALSDVRSLVDSGQYAEATAASVKLFGHP----ADVYQLLGDIELEFDDSHLKYAEETYRRELDLNTATARVK 138 (613)
Q Consensus 66 ---~~~~~~l~~iR~ll~~g~~~~A~~l~~~~~g~~----~~~y~~~g~L~l~~~~~~~~~~~~~Y~R~LDl~~a~~~v~ 138 (613)
|++...|++||++|++|++++ +++.++|.+ .++|||+|+|.|+|...... +++|+|+|||++|+++|+
T Consensus 96 ~~~~~~~~~l~~ir~l~~~g~~~~---l~~~~~~~~~~~~~~~y~~~g~l~i~~~~~~~~--~~~Y~R~LDl~~a~~~~~ 170 (899)
T 2eab_A 96 ETKGQNGATLRALNKQLANGAETV---NPGNLTGGENAAEQGNYLNWGDIYLDYGFNDTT--VTEYRRDLNLSKGKADVT 170 (899)
T ss_dssp HHHHGGGHHHHHHHHHHHTTCSBC---CCTTCCCCCCHHHHCCBCCCEEEEEECCCSCCC--CEEEEEEEETTTTEEEEE
T ss_pred ccCccHHHHHHHHHHHHHCCCHHH---HHHHhcCCCcccCCcccccceeEEEEccCCCCC--ccCeEEEEEccceEEEEE
Confidence 567789999999999999987 444556643 46999999999999622223 459999999999999999
Q ss_pred EEeCCEEEEEEEEeecCCCEEEEEEEeCCCCceEEEEEeccCCCCcc----cccCCCeEEEEeecCCCCCCCCCCCCCCC
Q 007204 139 YSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDSLLDNHS----YVNGNNQIIMEGRCPGKRIPPKANANDDP 214 (613)
Q Consensus 139 ~~~~g~~~~re~F~S~pd~viv~~i~a~~~~~l~~~~~l~~~~~~~~----~~~~~~~l~~~g~~~~~~~~~~~~~~~~~ 214 (613)
|+.+|++|+|++|||+||+|||+||+++++++|+|+++|+++..... ...+++.+++.|+.+ .
T Consensus 171 y~~~gv~y~re~f~S~pd~viv~~lta~~~~~l~~~~~l~~~~~~~~~~~~~~~~~~~l~l~g~~~-------------~ 237 (899)
T 2eab_A 171 FKHDGVTYTREYFASNPDNVMVARLTASKAGKLNFNVSMPTNTNYSKTGETTTVKGDTLTVKGALG-------------N 237 (899)
T ss_dssp EEETTEEEEEEEEEETTTTEEEEEEEESSTTCEEEEEECCBCTTSCEEEEEEEEETTEEEEEEEET-------------T
T ss_pred EEECCEEEEEEEEEecCCCEEEEEEEeCCCCcEEEEEEecCCcccccccceeeccCCEEEEEEEEC-------------C
Confidence 99999999999999999999999999999999999999998754222 123456788888763 2
Q ss_pred CCceEEEEEEEEEeCCCeeEEEec---CCeEEEeCCcEEEEEEEEeecCCCCCCCCCCCCC---ChHHHHHHHHHHhhcC
Q 007204 215 KGIQFSAILEIKISDDRGTISALE---DKKLKVEGSDWAVLLLVASSSFDGPFINPSDSKK---DPTSESMSALQSIRNL 288 (613)
Q Consensus 215 ~g~~f~~~~~v~~~g~~G~v~~~~---~~~i~v~~a~~v~i~~~~~t~y~~~~~~~~~~~~---d~~~~~~~~l~~a~~~ 288 (613)
+|++|+++++|+..| |+++..+ +++|.|++|++|+|++++.|+|+..+... ..+. ++.+.+.+.|++|..+
T Consensus 238 ~g~~~~~~~~v~~~g--G~~~~~~~~~~~~l~v~~a~~v~l~~~~~T~y~~~~~~~-~~~~~~~~~~~~~~~~l~~a~~~ 314 (899)
T 2eab_A 238 NGLLYNSQIKVVLDN--GEGTLSEGSDGASLKVSDAKAVTLYIAAATDYKQKYPSY-RTGETAAEVNTRVAKVVQDAANK 314 (899)
T ss_dssp TCCEEEEEEEEEEGG--GCSEEEECTTSSSEEEEEESEEEEEEEEEESBCCCTTTC-BCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEEeCC--ceEEeecCCCCCeEEEECCcEEEEEEEEeeccccccccc-cCccccccHHHHHHHHHHHHHhC
Confidence 589999999998776 6665432 35899999999999999999998532211 1233 4457788888888888
Q ss_pred CHHHHHHHHHHHHHhhhccceEEecCCCCCcccccCCccccCCCChHHHHHhccCC-----CChHHHHHHHHHHHHHhhh
Q 007204 289 SYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDTCSEENIDTVPSAERVKSFQTD-----EDPSLVELLFQFGRYLLIS 363 (613)
Q Consensus 289 ~y~~l~~~H~~~~~~l~~r~~l~L~~~~~~~~~~~~~~~~~~~~pt~~rl~~~~~~-----~d~~L~~l~f~~gRYLlis 363 (613)
+|++|+++|+++|++||+|++|+|++++.. ....+||+|||++|+.+ .||+|++++||||||||||
T Consensus 315 gy~~Ll~~H~~~w~~lw~R~~l~L~~~~~~---------~~~~~~td~~l~~~~~~~~~~~~d~~L~~l~f~fgRYlLis 385 (899)
T 2eab_A 315 GYTAVKKAHIDDHSAIYDRVKIDLGQSGHS---------SDGAVATDALLKAYQRGSATTAQKRELETLVYKYGRYLTIG 385 (899)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEESSCCCTT---------STTCCCHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCeeEEEeCCCccc---------ccccCCHHHHHHHhhcccccccccHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999876420 01368999999999865 3789999999999999999
Q ss_pred cCCC-CCCCCCCcccc------CCCCCCCCCCCceecccccchhcccccCCchHhHHHHHHHHHHhhHHHHHHHHHhcCC
Q 007204 364 SSRP-GTQVANLQGIW------NEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSINGSKTAQVNYLA 436 (613)
Q Consensus 364 ssR~-g~~P~~LqGiW------n~~~~~~W~~~y~~NiN~qmnyWpa~~~nl~E~~~pl~~~~~~l~~~gr~~A~~~yG~ 436 (613)
|||+ |++|+|||||| |....|+|+|+||+|||+||||||++++|||||++||++|++++++.||++||++|||
T Consensus 386 sSr~~g~lP~nLqGiWs~~~g~n~~~~p~W~g~y~~NiNtqmnywPa~~~nlpE~a~pLl~y~~~ll~~gr~~Ar~~yG~ 465 (899)
T 2eab_A 386 SSRENSQLPSNLQGIWSVTAGDNAHGNTPWGSDFHMNVNLQMNYWPTYSANMGELAEPLIEYVEGLVKPGRVTAKVYAGA 465 (899)
T ss_dssp HCCTTCSSCCBTTBTCCCCCCSSTTSSSGGGGCEETTTHHHHHTSSTTTTTCGGGGHHHHHHHHHTHHHHHHHHHHHHCC
T ss_pred cCCCCCCCCCCcccccccccCccccCCCCcCcceeeecccccccchhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9997 78999999999 7778999999999999999999999999999999999999999999999999999999
Q ss_pred C-------------CccccccCCcCCccCCCCCCcccccCcccHHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHH
Q 007204 437 S-------------GWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLL 503 (613)
Q Consensus 437 ~-------------G~~~~~~td~wg~t~p~~~~~~~~~w~~g~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~ 503 (613)
+ ||++||++|+|+.+.|. .++.|..||++++|+|+|+|+||+||+|++|| +++||+|+++|+||+
T Consensus 466 ~ga~~~~~~~g~~~Gw~~~~~~~~w~~t~p~-~~~~w~~~~~~~aWla~~lweyy~yTgD~~fL-~~~yPlLkeaA~F~~ 543 (899)
T 2eab_A 466 ETTNPETTPIGEGEGYMAHTENTAYGWTAPG-QSFSWGWSPAAVPWILQNVYEAYEYSGDPALL-DRVYALLKEESHFYV 543 (899)
T ss_dssp CCSSTTTSCTTSSSCCCCCSEECTTCCCSCC-SSHHHHCCTTHHHHHHHHHHHHHHTTCCHHHH-HHHHHHHHHHHHHHH
T ss_pred cccccccccccCcCCeEEeeccCCcccCCCC-CCCcccccCchHHHHHHHHHHHHHhhCCHHHH-HHHHHHHHHHHHHHH
Confidence 9 89999999999999885 45678899999999999999999999999999 889999999999999
Q ss_pred H-hccccC---CCeEEeCCCCCCCCcccCCCCCccee-ecCchHHHHHHHHHHHHHHHHHHHhCCC--------------
Q 007204 504 D-WLIEGH---DGYLETNPSTSPEHEFIAPDGKLACV-SYSSTMDMAIIREVFSAIISAAEVLEKN-------------- 564 (613)
Q Consensus 504 d-~l~~~~---~G~~v~~Ps~SPEn~~~~~~g~~~~~-~~~~t~d~~~ir~l~~~~i~a~~~Lg~~-------------- 564 (613)
+ +|++++ +|+|++.||+|||+.+ . +.|++||++|||++|+++++++++||+.
T Consensus 544 d~~l~~~~~~~~G~~vi~ps~SPE~~~---------~~~~~~tydn~l~~~ll~~~i~aa~~Lg~~~~~~~~~~~~~~~~ 614 (899)
T 2eab_A 544 NYMLHKAGSSSGDRLTTGVAYSPEQGP---------LGTDGNTYESSLVWQMLNDAIEAAKAKGDPDGLVGNTTDCSADN 614 (899)
T ss_dssp HHTCEECCGGGCSSEECSEEEETTEEE---------EEEECCHHHHHHHHHHHHHHHHHHHHTTCTTCCCCCSTTCCGGG
T ss_pred hhheEecCcCCCCeEEEccccCCCCCC---------CCCCCcHHHHHHHHHHHHHHHHHHHHhCcccccchhhhhhhhhc
Confidence 9 788887 8999999999999853 4 8899999999999999999999999971
Q ss_pred ----------ChHHHHHHHHHhCCCCCCCCCCCCCccccccccc
Q 007204 565 ----------EDALVEKVLKSLPRLRPTKIAEDGSIMEWVQRRL 598 (613)
Q Consensus 565 ----------~~~~~~~w~~~~~~L~p~~i~~~G~l~EW~~d~~ 598 (613)
+++++++|+++++||+||+|+++|||+||.+|++
T Consensus 615 ~~~~~~~~~~d~~~~~~w~~~~~kL~p~~i~~~G~l~EW~~d~~ 658 (899)
T 2eab_A 615 WAKNDSGNFTDANANRSWSCAKSLLKPIEVGDSGQIKEWYFEGA 658 (899)
T ss_dssp GCBCTTSCBSCTTSCCCHHHHHHHHCCCCBCTTSCBCSSTTBCS
T ss_pred cccccccccCCHHHHHHHHHHHhCCCCcccCCCceeeecccccc
Confidence 2346789999999999999999999999999876
No 3
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=100.00 E-value=1.6e-53 Score=492.36 Aligned_cols=396 Identities=13% Similarity=0.109 Sum_probs=305.7
Q ss_pred CCCeEEEeeccccEEEEEEEeC----CEEEEEEEEeecCCC---EEEEEEEe-CC-CCceEEEEEeccCCCCccc-----
Q 007204 121 EETYRRELDLNTATARVKYSVG----NVEFTREHFSSNPDQ---VIVTKISG-SE-SGSLSFNVSLDSLLDNHSY----- 186 (613)
Q Consensus 121 ~~~Y~R~LDl~~a~~~v~~~~~----g~~~~re~F~S~pd~---viv~~i~a-~~-~~~l~~~~~l~~~~~~~~~----- 186 (613)
+++|+|+|||.+|+.+.+|+.. +++++++.|||.++. |++++|++ +. ++.|+|+..++........
T Consensus 106 i~~y~r~LDl~~G~l~r~~~~~~~~~~v~i~~~rfvS~~~~~l~~i~~~it~~~~~~~~i~v~~~ld~~~~n~~~~~d~~ 185 (754)
T 1h54_A 106 ISDFTLDLDMHQGVLNRSFVVERGAVRVALNFQRFLSVAQPELSVQKVTVKNLSDAEVDVTLKPSIDADVMNEEANYDER 185 (754)
T ss_dssp EEEEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEECSSSTTEEEEEEEEEECSSSCEEEEECCEEECCCCCTTCCCC-C
T ss_pred eeeEEEEEEcccEEEEEEEEEEeCCcEEEEEEEEEEcCCCCeEEEEEEEEEECCCCceEEEEEEeeecccccCCcCCCCc
Confidence 4589999999999999998876 799999999999999 99999998 66 7788888777764321100
Q ss_pred ----c---cCCCeEEEEeecCCCCCCCCCCCCCCCCCceE---EEEEEE--EEeCCCeeEEEecCC------eEEEeCCc
Q 007204 187 ----V---NGNNQIIMEGRCPGKRIPPKANANDDPKGIQF---SAILEI--KISDDRGTISALEDK------KLKVEGSD 248 (613)
Q Consensus 187 ----~---~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~f---~~~~~v--~~~g~~G~v~~~~~~------~i~v~~a~ 248 (613)
. .+.+.+.+.++. ...++.+ ++.+++ .+.+..+++....+. ++.|++++
T Consensus 186 ~~~~~~~~~~~~~~~l~~~t-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 252 (754)
T 1h54_A 186 FWDVLATDQQADRGSIVAKT-------------TPNPFGTPRFTSGMEMRLVTDLKNVAITQPNEKEVTTAYTGKLAPQA 252 (754)
T ss_dssp CEEEEEEEECSSEEEEEEEE-------------CCCSSCCCCCEEEEEEEEEESSEEECCCCCBTTEEECEEEEEECTTC
T ss_pred eeeEeecccCCceEEEEEEE-------------CCCCeEEEeeEEEEEeecccccccceeeeccCCeEEEEEEEEEcCCc
Confidence 0 011233333332 2245666 666664 222200112110222 57788999
Q ss_pred EEEE--EEEEeecCCCCCCCCCCCCCChHHHHHHHHH-HhhcCCHHHHHHHHHHHHHhhhccceEEecCCCCCcccccCC
Q 007204 249 WAVL--LLVASSSFDGPFINPSDSKKDPTSESMSALQ-SIRNLSYSDLYTRHLDDYQKLFHRVSIQLSRSPKDIVTDTCS 325 (613)
Q Consensus 249 ~v~i--~~~~~t~y~~~~~~~~~~~~d~~~~~~~~l~-~a~~~~y~~l~~~H~~~~~~l~~r~~l~L~~~~~~~~~~~~~ 325 (613)
+++| ++++.|+++.. ..++.+.+.+.++ .|...+|++|+++|+++|+++|+|++|+|++++
T Consensus 253 ~~~l~K~v~~~ts~~~~-------~~~~~~~a~~~l~~~a~~~~~~~l~~~h~~~w~~~w~~~~i~i~gd~--------- 316 (754)
T 1h54_A 253 SAELEKRVIVVTSRDYD-------TQESLTAAMHQLSDKVAQSSYEDLLNAHTAIWAQRWEKSDVVIKGDD--------- 316 (754)
T ss_dssp EEEEEEEEEEEETTSCS-------SHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTCEEEESCH---------
T ss_pred EEEEEEEEEEEECCCCC-------cccHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhCcEEeCCCH---------
Confidence 9886 88889988631 2346667777787 777889999999999999999999999998653
Q ss_pred ccccCCCChHHHHHhccCCCChHHHHHHHHHHHH-HhhhcCCCC---CCCCCCccccCCCCCCCCCCCceecccccchhc
Q 007204 326 EENIDTVPSAERVKSFQTDEDPSLVELLFQFGRY-LLISSSRPG---TQVANLQGIWNEDLSPTWDSAPHVNINLEMNYW 401 (613)
Q Consensus 326 ~~~~~~~pt~~rl~~~~~~~d~~L~~l~f~~gRY-LlisssR~g---~~P~~LqGiWn~~~~~~W~~~y~~NiN~qmnyW 401 (613)
..||+.+ +++| |+++++|++ ++|+ +|||++ .|.|+++| |+||.||
T Consensus 317 --------~~q~~~r---------------~~~y~Ll~s~s~~~~~~~i~a--~GL~g~----~Y~G~~fW--dtE~~~~ 365 (754)
T 1h54_A 317 --------ESQQGIR---------------FNLFQLFSTYYGEDARLNIGP--KGFTGE----KYGGATYW--DTEAFAF 365 (754)
T ss_dssp --------HHHHHHH---------------HHHHHHHHHCCSSCTTCCCCT--TTTSCC----TTCSSBCT--HHHHTHH
T ss_pred --------HHHHHHH---------------HHHHHHHhccCCCCCCCCCCC--CCCCCC----CCCCccee--chHHHHH
Confidence 2555443 4444 445557653 4666 899986 57788887 8999999
Q ss_pred cccc-CCchHhHHHHHHHHHHhhHHHHHHHHHhcCCCCccccccCCcCCccCCCCCCcccccCccc------HHHHHHHH
Q 007204 402 QSLP-CNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMG------GAWLCTHL 474 (613)
Q Consensus 402 pa~~-~nl~E~~~pl~~~~~~l~~~gr~~A~~~yG~~G~~~~~~td~wg~t~p~~~~~~~~~w~~g------~aWla~~l 474 (613)
|++. .|+|||++||++|++++++.||++|++ +|++||++| |... + |..++..|+.+ ++|+|+++
T Consensus 366 P~~~~~~~pe~a~~ll~yr~~~l~~Ar~~A~~-~G~~Ga~~p-----W~s~-~--G~e~~~~w~~~~~q~Hi~a~ia~a~ 436 (754)
T 1h54_A 366 PVYLGITDPKVTRNLLMYRYKQLDGAYINAQE-QGLKGALFP-----MVTF-D--GIECHNEWEITFEEIHRNGDIAFAI 436 (754)
T ss_dssp HHHHHHSCHHHHHHHHHHHHTTHHHHHHHHHT-TTCCSCCCC-----SSBS-S--SSBCCCCHHHHTTCTHHHHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH-hCCCcceee-----eECc-C--CCcCCCCCccccceecchHHHHHHH
Confidence 9999 999999999999999999999999998 699999995 5433 2 22334455544 79999999
Q ss_pred HHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccC-CCeE----EeCCCCCCCCcccCCCCCcceeecCchHHHHHHHH
Q 007204 475 WEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGH-DGYL----ETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIRE 549 (613)
Q Consensus 475 w~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~-~G~~----v~~Ps~SPEn~~~~~~g~~~~~~~~~t~d~~~ir~ 549 (613)
|+||+||+|++||++++||+|+++|+||+++++.++ +|+| |++|+++||| ++|++|||+++++
T Consensus 437 ~~yy~~T~D~~fL~~~g~~~l~e~A~Fw~s~~~~~~~~g~y~i~~VtgPdEy~e~------------v~nn~ytn~~a~~ 504 (754)
T 1h54_A 437 YNYTRYTGDDSYVLHEGAKVLTEISRFWADRVHFSKRNNQYMIHGVTGADEYENN------------VDNNWDTNMLAQW 504 (754)
T ss_dssp HHHHHHHCCCTTTTTHHHHHHHHHHHHHHHHCEEETTTTEEECCSBCCSSTTSCS------------BSCCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHhCChHHHHHHHHHHHHheEEeCCCCEEEEccccCcccccCC------------CCCcHHHHHHHHH
Confidence 999999999999999999999999999999999874 7999 6777777765 6799999999999
Q ss_pred HHHHHHHHH--------HHhCCCChHHHHHHHHHhCCCCCCCCCC---------CCCccccccccc
Q 007204 550 VFSAIISAA--------EVLEKNEDALVEKVLKSLPRLRPTKIAE---------DGSIMEWVQRRL 598 (613)
Q Consensus 550 l~~~~i~a~--------~~Lg~~~~~~~~~w~~~~~~L~p~~i~~---------~G~l~EW~~d~~ 598 (613)
+|+.+++++ +.||++ +++.++|++++++|+++.+++ +++|+||..+..
T Consensus 505 ~l~~a~~~~~~l~~~~~~~lg~~-~~~~~~w~~i~~~l~~p~~~~~gv~~q~dg~~~l~ewd~~~~ 569 (754)
T 1h54_A 505 TLKYTLEILGKVDQDTAKQLDVS-DEEKTKWQDIVDRMYLPYDKDLNIFVQHDGFLDKDIEPVSSI 569 (754)
T ss_dssp HHHHHHHHHTTSCHHHHHHHCCC-HHHHHHHHHHHHTBCCCEETTTTEECSSTTGGGSCCCCGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHHHhCCCCCccCCCCeeeccccccccccCchhhc
Confidence 999999998 889995 567899999999999877765 678999974433
No 4
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=98.01 E-value=0.0021 Score=74.84 Aligned_cols=104 Identities=17% Similarity=0.238 Sum_probs=73.8
Q ss_pred CcccHHHHHHHHHHHHHhcCCHHHHhhhhHHH-----------HHHHHHHHHHhccccCCCeEEeC-CCCCCCCcccCCC
Q 007204 463 WPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPL-----------LEGCASFLLDWLIEGHDGYLETN-PSTSPEHEFIAPD 530 (613)
Q Consensus 463 w~~g~aWla~~lw~~y~~T~D~~fL~~~~yP~-----------l~~~A~F~~d~l~~~~~G~~v~~-Ps~SPEn~~~~~~ 530 (613)
|.-...|+...+|+||++|||.+||++ .||. |+.+.+|...++ +++|.+... .+.. . . ..+
T Consensus 424 ~~D~~lw~~~~~~~y~~~tGD~~~L~e-~~p~~~~~~~~v~e~~~~~~~~~~~~~--~~~GL~~~~~~DW~-D-~-~~~- 496 (807)
T 1v7w_A 424 CSDDHLWLIPTICKYVMETGETSFFDQ-MIPYADGGEASVYEHMKAALDFSAEYV--GQTGICKGLRADWN-D-C-LNL- 496 (807)
T ss_dssp BSSGGGGHHHHHHHHHHHHCCGGGGGC-EEECTTSCEEEHHHHHHHHHHHHHHSB--CTTSCBEEETCSSS-T-T-CCC-
T ss_pred ccchhhHHHHHHHHHHHHhCCHHHHhc-ccccccCCcchHHHHHHHHHHHHHhcC--CCCCCcccCCCCCC-C-c-CCC-
Confidence 345568999999999999999999985 7886 999999988764 346753321 1110 0 0 111
Q ss_pred CCcceeecCchHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCCCC
Q 007204 531 GKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR 580 (613)
Q Consensus 531 g~~~~~~~~~t~d~~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~L~ 580 (613)
| .--+.+.++++...++.+.++++.||. ++..++|++.+++|.
T Consensus 497 ~-----~g~~v~~~a~~y~al~~~a~la~~lG~--~~~a~~~~~~A~~lk 539 (807)
T 1v7w_A 497 G-----GGESSMVSFLHFWALQEFIDLAKFLGK--DQDVNTYTEMAANVR 539 (807)
T ss_dssp E-----EEEEHHHHHHHHHHHHHHHHHHHHHTC--HHHHHHHHHHHHHHH
T ss_pred C-----CCeehhHHHHHHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHH
Confidence 1 123677899999999999999999995 344677777777664
No 5
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=97.70 E-value=4.9e-05 Score=90.34 Aligned_cols=187 Identities=11% Similarity=0.072 Sum_probs=108.1
Q ss_pred ChHHHHHHHHHHHHHhhhcCCCCCCCCCCccccCCCCCCCCCCCceecccccchhcccccCCchHhHHHHHHHHHHhhHH
Q 007204 346 DPSLVELLFQFGRYLLISSSRPGTQVANLQGIWNEDLSPTWDSAPHVNINLEMNYWQSLPCNLSECQEPLFDFLTYLSIN 425 (613)
Q Consensus 346 d~~L~~l~f~~gRYLlisssR~g~~P~~LqGiWn~~~~~~W~~~y~~NiN~qmnyWpa~~~nl~E~~~pl~~~~~~l~~~ 425 (613)
|+ ++..+|+.+.+-|.++.+. .|. .|..- ....|.+|..+.. .+ .....+.+++++..++.+...
T Consensus 543 d~-~lN~l~~~a~~tl~~n~~~--~~t--D~p~R--Er~~W~gD~~~~a--~~---~l~~~g~~~lar~~L~~l~~~--- 607 (956)
T 2okx_A 543 DA-LLNATWEISRHTTRLCMED--TFV--DCPSY--EQVFWVGDSRNEA--LV---NYYVFGETEIVERCLNLVPGS--- 607 (956)
T ss_dssp CH-HHHHHHHHHHHHHHHTBSS--SBC--SCTTT--TCCCBHHHHHHHH--HH---HHHHTCCCHHHHHHHHHGGGG---
T ss_pred cH-HHHHHHHHHHHHHHHhccc--Ccc--CCCcc--cCCccHHHHHHHH--HH---HHHHcCCHHHHHHHHHHHHhh---
Confidence 44 4555667888888776643 221 11111 1346777655421 11 112344666666655544321
Q ss_pred HHHHHHHhcCCCCccccccCCcCCccCCCCCCcccccCcccHHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHh
Q 007204 426 GSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDW 505 (613)
Q Consensus 426 gr~~A~~~yG~~G~~~~~~td~wg~t~p~~~~~~~~~w~~g~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~ 505 (613)
-..+|.+-+...+.|. ... +.-+.|++.++|+||++|||++||++ .||.|+.+++|+.++
T Consensus 608 --------Q~~dG~ip~~~p~~~~-----~~~------~~~~~~~i~~~~~yy~~tGD~~~L~e-~yp~lk~~l~~~~~~ 667 (956)
T 2okx_A 608 --------ADETPLYLDQVPSAWS-----SVI------PNWTFFWILACREYAAHTGNEAFAAR-IWPAVKHTLTHYLEH 667 (956)
T ss_dssp --------TTTCTTCCSBSSCSSC-----CCC------HHHHHHHHHHHHHHHHHHTCHHHHHH-HHHHHHHHHHHHHTT
T ss_pred --------cccCCCcCcccccccc-----CCC------cChHHHHHHHHHHHHHHhCCHHHHHH-HHHHHHHHHHHHHhc
Confidence 1345654332222221 011 11257899999999999999999985 899999999999987
Q ss_pred ccccCCCeEEeCCCCCCCCccc---CCCCCcceeecCchHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCCC
Q 007204 506 LIEGHDGYLETNPSTSPEHEFI---APDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRL 579 (613)
Q Consensus 506 l~~~~~G~~v~~Ps~SPEn~~~---~~~g~~~~~~~~~t~d~~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~L 579 (613)
+. ++|.+.. | ++.+. .+.+. ..-.++++++++...|+.+++++++||.+++ .++|++.+++|
T Consensus 668 ~d--~~GLl~~-~----~~~~~DW~d~~~~---~~G~~~~~~a~~~~al~~~a~lA~~LG~~~~--a~~y~~~A~~l 732 (956)
T 2okx_A 668 ID--DSGLLNM-A----GWNLLDWAPIDQP---NEGIVTHQNLFLVKALRDSRALAAAAGATEE--ADAFAARADLL 732 (956)
T ss_dssp BC--TTSSBCC-S----SCCCCCSSSCCCC---SSSEEHHHHHHHHHHHHHHHHHHHHTTCGGG--GHHHHHHHHHH
T ss_pred CC--CCCCEEe-C----CCCccCccCCCCC---CCCcCHHHHHHHHHHHHHHHHHHHHhCChHH--HHHHHHHHHHH
Confidence 63 4675432 2 22211 00000 0012689999999999999999999997432 34454444443
No 6
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.42 E-value=0.0074 Score=69.66 Aligned_cols=100 Identities=15% Similarity=0.307 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeEEeCC------CCCCCCcccCCCCCcceeecCc
Q 007204 467 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNP------STSPEHEFIAPDGKLACVSYSS 540 (613)
Q Consensus 467 ~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~v~~P------s~SPEn~~~~~~g~~~~~~~~~ 540 (613)
..|....+|+||++|||++||++ .||.|+.+.+|+..+. +++|.+.... +..+.. ...+| -.
T Consensus 386 ~l~wi~~~~~yy~~tGD~~~L~e-~~p~l~~~ld~~~~~~--d~~GL~~~~~G~W~~~dW~d~~--~~~~G-------~~ 453 (739)
T 3cih_A 386 TFYWFLSVYDYYMYSGDRHFVNQ-LYPRMQTMMDYVLGRT--NKNGMVEGMSGDWVFVDWADGY--LDKKG-------EL 453 (739)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHH-HHHHHHHHHHHHHTTB--CTTSCBCCCTTCBCCSCCCTTC--CCCSS-------EE
T ss_pred hHHHHHHHHHHHHHhCCHHHHHH-HHHHHHHHHHHHHHhc--CCCCCcccCCCCcccCCCcccc--cCCCC-------cc
Confidence 45667899999999999999985 8999999999998864 3466432211 110000 00011 14
Q ss_pred hHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCCCC
Q 007204 541 TMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR 580 (613)
Q Consensus 541 t~d~~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~L~ 580 (613)
++.+++....++.+.+++++||.+ +..++|++.+++|.
T Consensus 454 ~~~~a~~y~al~~~a~lA~~lG~~--~~A~~y~~~A~~lk 491 (739)
T 3cih_A 454 SFEQVLFCRSLETMALCADLVGDK--DGQQKYEKLASALK 491 (739)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCH--HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCh--HHHHHHHHHHHHHH
Confidence 577899999999999999999963 34677877777665
No 7
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=96.07 E-value=0.11 Score=60.60 Aligned_cols=109 Identities=15% Similarity=0.086 Sum_probs=72.1
Q ss_pred cccHHHHHHHHHHHHHhcCCHHHHhh------------hhHHHHHHHHHHHHHhccccCCCeEEeC-CCC----------
Q 007204 464 PMGGAWLCTHLWEHYNYTMDRDFLEK------------RAYPLLEGCASFLLDWLIEGHDGYLETN-PST---------- 520 (613)
Q Consensus 464 ~~g~aWla~~lw~~y~~T~D~~fL~~------------~~yP~l~~~A~F~~d~l~~~~~G~~v~~-Ps~---------- 520 (613)
.-...|+...+++|+++|||.+||++ ..|+.++.+.+|....+ +++|...++ .++
T Consensus 421 ~D~~lWl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~--g~~GLp~~g~gDWnD~ln~~~~~ 498 (822)
T 3rrs_A 421 NDDPLWLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHR--GPHGLPLIGRADWNDCLNLNCFS 498 (822)
T ss_dssp TTHHHHHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSB--CTTSSBBCBTCSSSTTCCTTCCC
T ss_pred cchHhHHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcC--CCCCCcccCCCcchhhccccccc
Confidence 33478999999999999999999975 35778888898888654 334532211 000
Q ss_pred -CCCCc--ccCCC-CCcceeecCchHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCCCC
Q 007204 521 -SPEHE--FIAPD-GKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR 580 (613)
Q Consensus 521 -SPEn~--~~~~~-g~~~~~~~~~t~d~~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~L~ 580 (613)
.+... .++|. |. .--+.+.+++....|+.++++++.+|. ++..++|++.+++|.
T Consensus 499 ~~vg~~~~~~~p~~~~----~Gesv~~~al~y~AL~~~a~lA~~~G~--~~~A~~~~~~A~~lk 556 (822)
T 3rrs_A 499 TTPGESFQTTENQAGG----VAESTFIAAQFVLYGEQYAELAARRGL--ADVADRARGHVAEMR 556 (822)
T ss_dssp CSTTCCTTTCCSSCCC----CCEEHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHH
T ss_pred ccccccccccccccCC----ccccHHHHHHHHHHHHHHHHHHHHcCC--hHHHHHHHHHHHHHH
Confidence 01100 01110 00 112578899999999999999999994 345667777776665
No 8
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=95.97 E-value=0.17 Score=58.91 Aligned_cols=109 Identities=15% Similarity=0.147 Sum_probs=72.4
Q ss_pred cccHHHHHHHHHHHHHhcCCHHHHhh------------hhHHHHHHHHHHHHHhccccCCCeEEeC-CCC----------
Q 007204 464 PMGGAWLCTHLWEHYNYTMDRDFLEK------------RAYPLLEGCASFLLDWLIEGHDGYLETN-PST---------- 520 (613)
Q Consensus 464 ~~g~aWla~~lw~~y~~T~D~~fL~~------------~~yP~l~~~A~F~~d~l~~~~~G~~v~~-Ps~---------- 520 (613)
.-...|+...+++||++|||.+||++ ..|+-++.+.+|....+ +++|...++ .++
T Consensus 414 ~D~~lW~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~--g~~GL~~~g~~DWnD~ln~~~~~ 491 (811)
T 3qde_A 414 NDDPLWLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNL--GPHGLPLIGRADWNDCLNLNCFS 491 (811)
T ss_dssp TTHHHHHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCB--CTTSSBBCBTCSSSTTCCSSCCC
T ss_pred ccchhHHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhcC--CCCCCcccccCCchhhccccccc
Confidence 33478999999999999999999975 35888889888877643 345532221 111
Q ss_pred -CCCCc--ccCCC-CCcceeecCchHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCCCC
Q 007204 521 -SPEHE--FIAPD-GKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR 580 (613)
Q Consensus 521 -SPEn~--~~~~~-g~~~~~~~~~t~d~~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~L~ 580 (613)
.+... .++|. |. .--+.+.+++....|+.+.+.++.+|. ++..++|++.+++|.
T Consensus 492 ~~vg~~~~~vtp~~~~----~gesv~~~al~y~AL~~~a~lA~~lGd--~~~A~~~~~~A~~lk 549 (811)
T 3qde_A 492 TVPDESFQTTTSKDGK----VAESVMIAGMFVFIGKDYVKLCEYMGL--EEEARKAQQHIDAMK 549 (811)
T ss_dssp CCTTSCTTTSCCCCCS----SCEEHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHH
T ss_pred cccCccccccccccCC----cccCHHHHHHHHHHHHHHHHHHHHcCC--HHHHHHHHHHHHHHH
Confidence 01000 01110 00 112578899999999999999999995 345667777776664
No 9
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=95.47 E-value=0.035 Score=64.17 Aligned_cols=45 Identities=22% Similarity=0.319 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCe
Q 007204 468 AWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGY 513 (613)
Q Consensus 468 aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~ 513 (613)
.+++..+|+||+.|+|++||++ .||.|+...+||......+.+|.
T Consensus 394 Pl~~~av~~yy~~tgD~~fL~e-~~P~L~~~~~w~~~~rd~d~~GL 438 (761)
T 3c68_A 394 SLAAWSVMEVYNVTQDKTWVAE-MYPKLVAYHDWWLRNRDHNGNGV 438 (761)
T ss_dssp CCHHHHHHHHHHHHCCHHHHHH-HHHHHHHHHHHHHHHSCTTCSSC
T ss_pred HHHHHHHHHHHHHhCCHHHHHH-HHHHHHHHHHHHHhCCCCCcCcc
Confidence 3556789999999999999984 89999999999999865445663
No 10
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=92.74 E-value=0.17 Score=54.84 Aligned_cols=111 Identities=7% Similarity=0.002 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccC-CCeEEe-CCCCCCC--------------Cc-----
Q 007204 467 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGH-DGYLET-NPSTSPE--------------HE----- 525 (613)
Q Consensus 467 ~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~-~G~~v~-~Ps~SPE--------------n~----- 525 (613)
.+-..+.+|+||+.|+|.+|+.+.....++.+++|+..--..+. .|-|.. -.+..+. .+
T Consensus 182 la~~L~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~~~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~ 261 (489)
T 2p0v_A 182 LCYPIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKDDAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASA 261 (489)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCSSCSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCS
T ss_pred hHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhcccCCCCCceEeecCCCcccccccCCCCCccCCCCceeCC
Confidence 45666789999999999999987666899999999987333221 132321 0000000 00
Q ss_pred ccCCCCCcceeecCchHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCCCC
Q 007204 526 FIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLR 580 (613)
Q Consensus 526 ~~~~~g~~~~~~~~~t~d~~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~L~ 580 (613)
|...+. ++.-.=-++++.++.-.|+.+.+.++.++. +.++.++|+++.+.+.
T Consensus 262 fRPSDD--a~~yg~~ipSN~~a~v~L~~aaeia~~v~~-d~~la~~~~~lA~eI~ 313 (489)
T 2p0v_A 262 FRPSDD--ATTFQFLVPSNFFAVTSLRKAAEILNTVNR-KPALAKECTALADEVE 313 (489)
T ss_dssp BCTTSC--BCSSSEEHHHHHHHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHHH
T ss_pred CCCCCc--chhcCcchHHHHHHHHHHHHHHHHHHHhcc-CHHHHHHHHHHHHHHH
Confidence 010000 000011467899999999999999999985 4567778877766543
No 11
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=92.16 E-value=0.33 Score=51.68 Aligned_cols=44 Identities=18% Similarity=0.126 Sum_probs=36.5
Q ss_pred HHHHHHHHHHHhcCC----HHHHhhhhHHHHHHHHHHHHHhccccCCCe
Q 007204 469 WLCTHLWEHYNYTMD----RDFLEKRAYPLLEGCASFLLDWLIEGHDGY 513 (613)
Q Consensus 469 Wla~~lw~~y~~T~D----~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~ 513 (613)
+++..+|++|+.|+| ++||++ .||.|+...+||.+....+.+|.
T Consensus 106 ~~~~~~~~~~~~tgD~~~~~~~L~~-~~p~l~~~~~~~~~~~d~~~~Gl 153 (420)
T 2z07_A 106 VVATVVRYLYEKDPDRDRARERARY-LFPKLLAFHRWLYHARDPYRTGL 153 (420)
T ss_dssp CHHHHHHHHHHHCSCHHHHHHHHHH-HHHHHHHHHHHHHHHHCTTCCSC
T ss_pred HHHHHHHHHHHhCccchhHHHHHHH-HHHHHHHHHHHHhcCCCCCCCCc
Confidence 466778999999999 999985 89999999999998764444664
No 12
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=90.99 E-value=1.9 Score=45.50 Aligned_cols=41 Identities=24% Similarity=0.374 Sum_probs=35.4
Q ss_pred ccCcccHHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhc
Q 007204 461 ALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWL 506 (613)
Q Consensus 461 ~~w~~g~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l 506 (613)
..|.-|.||+...+-+-|++|+|++||+ . -++.++|+++.+
T Consensus 217 s~WaRGqAw~i~gl~~ly~~T~d~~yL~-~----A~~la~~~l~~~ 257 (377)
T 2ahf_A 217 STWTRGQAWGIYGFALNSRYLGNADLLE-T----AKRMARHFLARV 257 (377)
T ss_dssp SCBHHHHHHHHHHHHHHHHHHTCHHHHH-H----HHHHHHHHHTTC
T ss_pred chhHHHHHHHHHHHHHHHHHHCChHHHH-H----HHHHHHHHHHhh
Confidence 4677889999999999999999999996 2 357889999987
No 13
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=90.67 E-value=33 Score=40.77 Aligned_cols=130 Identities=15% Similarity=0.058 Sum_probs=78.6
Q ss_pred cCCchHhHHHHHHHHHHhhHHHHHHHHHhcCCCCccccccCCcCCccCCCCCCccccc-CcccHHHHHHHHHHHHHhcCC
Q 007204 405 PCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAKSSADRGKVVWAL-WPMGGAWLCTHLWEHYNYTMD 483 (613)
Q Consensus 405 ~~nl~E~~~pl~~~~~~l~~~gr~~A~~~yG~~G~~~~~~td~wg~t~p~~~~~~~~~-w~~g~aWla~~lw~~y~~T~D 483 (613)
..+.+|.++..++|+.+... .-.|...| ...+ +|.+.|.- -.-..++....+|.|++ + |
T Consensus 343 ~~G~~e~A~~~l~~L~~~Q~----------~~~G~~~~-~y~i-------~G~~~w~~~Q~D~~g~~l~~~~~~~~-~-d 402 (1020)
T 1ulv_A 343 AAGDEEAAARGVEWLFTYQQ----------QPDGHFPQ-TSRV-------DGTIGQNGIQLDETAFPILLANQIGR-T-D 402 (1020)
T ss_dssp HHTCHHHHHHHHHHHHHHTC----------CTTSCCCS-CBCT-------TSCBCCCCCBTHHHHHHHHHHHHHTC-C-C
T ss_pred HcCCHHHHHHHHHHHHHHhc----------CCCCCeee-EEec-------CCCcCCCCccCccchHHHHHHHHHHh-c-C
Confidence 35678888888888875431 12343222 1111 12222221 11234677777787776 3 5
Q ss_pred HHHHhhhhHH-HHHHHHHHHHHhccccCCCeEEeCCCCCCCCcccCCCCCcceeecCchHHHHHHHHHHHHHHHHHHHhC
Q 007204 484 RDFLEKRAYP-LLEGCASFLLDWLIEGHDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLE 562 (613)
Q Consensus 484 ~~fL~~~~yP-~l~~~A~F~~d~l~~~~~G~~v~~Ps~SPEn~~~~~~g~~~~~~~~~t~d~~~ir~l~~~~i~a~~~Lg 562 (613)
+..|| +++.+++|..++- |..+.+ .+....| -.+|+.+++...|..+++.++.+|
T Consensus 403 -----~~~w~~~v~~al~~i~~~g-----------~~~~~~-~WEe~~g-------~~~~t~~~~~~AL~~aa~lA~~~G 458 (1020)
T 1ulv_A 403 -----AGFYRNELKPAADYLVAAG-----------PKTPQE-RWEETGG-------YSTSTLASQIAALAAAADIAGKNG 458 (1020)
T ss_dssp -----HHHHHHTHHHHHHHHHHHC-----------SCBSBC-TTSSCCB-------EEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----HHHHHHHHHHHHHHHHHhC-----------CCCChh-hhcccCC-------cCHHHHHHHHHHHHHHHHHHHHcC
Confidence 35799 9999999998872 111100 1111111 267889999999999999999999
Q ss_pred CCChHHHHHHHHHhCCCC
Q 007204 563 KNEDALVEKVLKSLPRLR 580 (613)
Q Consensus 563 ~~~~~~~~~w~~~~~~L~ 580 (613)
. .+..++|++.+++|.
T Consensus 459 ~--~~~a~~w~~~Ad~i~ 474 (1020)
T 1ulv_A 459 D--AGSAAVYRATADEWQ 474 (1020)
T ss_dssp C--HHHHHHHHHHHHHHH
T ss_pred C--hhHHHHHHHHHHHHH
Confidence 5 345678887777664
No 14
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=87.28 E-value=3.2 Score=44.00 Aligned_cols=40 Identities=23% Similarity=0.366 Sum_probs=35.7
Q ss_pred cCcccHHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhc
Q 007204 462 LWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWL 506 (613)
Q Consensus 462 ~w~~g~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l 506 (613)
.|.-|.||+.+.+-+.|++|+|++||+ .+ ++.++|+++.+
T Consensus 243 ~WaRGqAw~i~gl~~lY~~T~d~~yL~-~A----~~la~~~l~~~ 282 (397)
T 2zzr_A 243 SWARGQAWGIYGIPLSYRKMKDYQQII-LF----KGMTNYFLNRL 282 (397)
T ss_dssp CBHHHHHHHHHHHHHHHHHHCCHHHHH-HH----HHHHHHHHHTC
T ss_pred hhHHHHHHHHHHHHHHHHHHCCHHHHH-HH----HHHHHHHHHhh
Confidence 577789999999999999999999996 34 78899999987
No 15
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=83.90 E-value=4.7 Score=45.09 Aligned_cols=132 Identities=14% Similarity=0.072 Sum_probs=78.8
Q ss_pred cCCchHhHHHHHHHHHHhhHHHHHHHHHhcCCCCccccccCCcCCc-cCCCCCC---cccccCcc-c-----HHHHHHHH
Q 007204 405 PCNLSECQEPLFDFLTYLSINGSKTAQVNYLASGWVIHHKTDIWAK-SSADRGK---VVWALWPM-G-----GAWLCTHL 474 (613)
Q Consensus 405 ~~nl~E~~~pl~~~~~~l~~~gr~~A~~~yG~~G~~~~~~td~wg~-t~p~~~~---~~~~~w~~-g-----~aWla~~l 474 (613)
..+..|.++.+++|+.+. ..-+.+|+..|-.... . .++. ....+|. ..|.--.. + -+.+....
T Consensus 68 ~~G~~~~a~~~~~~l~~~-----~~lQ~~y~~~G~~~~~-~-~l~E~~~~ldG~~~~~~w~~~Q~D~~glr~~~~~~~~~ 140 (599)
T 2vn4_A 68 ETYDAGLQRRIEQYITAQ-----VTLQGLSNPSGSLADG-S-GLGEPKFELTLKPFTGNWGRPQRDGPALRAIALIGYSK 140 (599)
T ss_dssp HSBCHHHHHHHHHHHHHH-----HHHHHCCBTTBCSTTS-G-GGGCCEECTTSCBCCSCCSCCCTHHHHHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHhcc-----cceeeeeCCCCCcccc-c-CcCceEEecCCccccCcCCCeeccccchhHHHHHHHHH
Confidence 455678888888988761 2235567777642100 0 0000 0001111 11221111 1 13444444
Q ss_pred HHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeEEeCCCCCCCCcccCCCCCcceeecCchHHHHHHHHHHHHH
Q 007204 475 WEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAI 554 (613)
Q Consensus 475 w~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~v~~Ps~SPEn~~~~~~g~~~~~~~~~t~d~~~ir~l~~~~ 554 (613)
| |..+++.+|+++..+|+++.+++|..++-.+...|.+ |.. .| -.+|+.++++-.|..+
T Consensus 141 ~--~~~~g~~~~~~~~~w~~v~~~l~~v~~~w~~~d~dlW--------Eer----~g-------~~~~T~~~~~~aL~~a 199 (599)
T 2vn4_A 141 W--LINNNYQSTVSNVIWPIVRNDLNYVAQYWNQTGFDLW--------EEV----NG-------SSFFTVANQHRALVEG 199 (599)
T ss_dssp H--HHHTTCHHHHHHHTHHHHHHHHHHHHHHTTSCEECTT--------SCC----EE-------EEHHHHHHHHHHHHHH
T ss_pred H--HHHhCCcccccHHHHHHHHHHHHHHHHhCCCCCCCee--------eec----CC-------cchHHHHHHHHHHHHH
Confidence 4 7789999999877899999999998887533111222 221 11 1688899999999999
Q ss_pred HHHHHHhCCC
Q 007204 555 ISAAEVLEKN 564 (613)
Q Consensus 555 i~a~~~Lg~~ 564 (613)
++.++.+|.+
T Consensus 200 a~lA~~~g~~ 209 (599)
T 2vn4_A 200 ATLAATLGQS 209 (599)
T ss_dssp HHHHHHHTCC
T ss_pred HHHHHHcCCC
Confidence 9999999964
No 16
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=79.82 E-value=85 Score=35.34 Aligned_cols=69 Identities=14% Similarity=0.018 Sum_probs=46.5
Q ss_pred hHHH-HHHHHHHHHHhccccCCCeEEeCCCCCCCCcccCCCCCcceeecCchHHHHHHHHHHHHHHHHHHHhCCCChHHH
Q 007204 491 AYPL-LEGCASFLLDWLIEGHDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALV 569 (613)
Q Consensus 491 ~yP~-l~~~A~F~~d~l~~~~~G~~v~~Ps~SPEn~~~~~~g~~~~~~~~~t~d~~~ir~l~~~~i~a~~~Lg~~~~~~~ 569 (613)
.||. ++.+++|..++--....|.+ |. .. --..++.+++...|..+++.++.+|. .+..
T Consensus 413 ~~~~~v~~al~~i~~~~~~~~~g~W--------E~----~~-------g~~~~t~~~~~~aL~~~a~lA~~~g~--~~~a 471 (684)
T 1lf6_A 413 LYDSLVKPLADFIIKIGPKTGQERW--------EE----IG-------GYSPATMAAEVAGLTCAAYIAEQNKD--YESA 471 (684)
T ss_dssp GTTTTHHHHHHHHHHHCSSBSSCTT--------SS----CC-------BBCHHHHHHHHHHHHHHHHHHHHTTC--HHHH
T ss_pred chHHHHHHHHHHHHHhCCCCCcccc--------cc----cC-------CcCHHHHHHHHHHHHHHHHHHHHcCC--hHHH
Confidence 6898 99999998886311001111 11 01 12478888999999999999999995 3456
Q ss_pred HHHHHHhCCCC
Q 007204 570 EKVLKSLPRLR 580 (613)
Q Consensus 570 ~~w~~~~~~L~ 580 (613)
++|++..++|.
T Consensus 472 ~~~~~~a~~i~ 482 (684)
T 1lf6_A 472 QKYQEKADNWQ 482 (684)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77887776654
No 17
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=64.44 E-value=13 Score=40.73 Aligned_cols=33 Identities=12% Similarity=0.048 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhc
Q 007204 472 THLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWL 506 (613)
Q Consensus 472 ~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l 506 (613)
..++++|+.|+| +||+ +.||.|+...+||.+.-
T Consensus 183 ~~v~~~~~~~~~-~fL~-~~~p~L~~~~~ww~~~~ 215 (535)
T 2jg0_A 183 LMVELLAQHEGD-AALK-QYLPQMQKEYAYWMDGV 215 (535)
T ss_dssp HHHHHHHHHHTH-HHHH-HHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHcCCH-HHHH-HHHHHHHHHHHHHHhCC
Confidence 456777888865 9998 48999999999998754
No 18
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=61.30 E-value=13 Score=40.31 Aligned_cols=76 Identities=14% Similarity=0.152 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeEEeCCCCCCCCcccCCCCCcceeecCchHHHHHH
Q 007204 468 AWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPSTSPEHEFIAPDGKLACVSYSSTMDMAII 547 (613)
Q Consensus 468 aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~v~~Ps~SPEn~~~~~~g~~~~~~~~~t~d~~~i 547 (613)
+.+....| |..+++.+++++..+|+++..++|..++-.+...|.+ |.. .| -.+|+..++
T Consensus 133 ~~~~~~~~--l~~~g~~~~~~~~~w~~i~~~l~~v~~~w~~pd~dlW--------Eer----~g-------~~~~T~~~~ 191 (472)
T 1gai_A 133 AMIGFGQW--LLDNGYTSAATEIVWPLVRNDLSYVAQYWNQTGYDLW--------EEV----NG-------SSFFTIAVQ 191 (472)
T ss_dssp HHHHHHHH--HHHTTCHHHHHHTHHHHHHHHHHHHHHHTTSCEECTT--------SCC----EE-------EEHHHHHHH
T ss_pred HHHHHHHH--HHHcCCccccchhHHHHHHHHHHHHHHhcCCCCCCCC--------ccc----CC-------CCHHHHHHH
Confidence 34444444 7789999999877999999999998887533111222 221 11 167899999
Q ss_pred HHHHHHHHHHHHHhCCC
Q 007204 548 REVFSAIISAAEVLEKN 564 (613)
Q Consensus 548 r~l~~~~i~a~~~Lg~~ 564 (613)
+-.|..+++.++.+|.+
T Consensus 192 ~~AL~~aa~lA~~~g~~ 208 (472)
T 1gai_A 192 HRALVEGSAFATAVGSS 208 (472)
T ss_dssp HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCc
Confidence 99999999999999964
No 19
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=51.92 E-value=95 Score=33.15 Aligned_cols=57 Identities=7% Similarity=0.081 Sum_probs=40.3
Q ss_pred ccCcccHHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeEEeCCC
Q 007204 461 ALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLETNPS 519 (613)
Q Consensus 461 ~~w~~g~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~v~~Ps 519 (613)
.+|--|.+|.+..+-+-+++.....--+......+++.|+++..+.- ++|.+...++
T Consensus 262 ~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~--~~G~W~~vld 318 (445)
T 3k11_A 262 FCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQS--GEGFWHQLLD 318 (445)
T ss_dssp CCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCC--TTSCEESBTT
T ss_pred ceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCC--CCCchhhccC
Confidence 37888999999999999997332111123355678899999998863 5888765444
No 20
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=50.92 E-value=1.1e+02 Score=31.68 Aligned_cols=85 Identities=14% Similarity=0.129 Sum_probs=52.4
Q ss_pred HHHHHHHHHhcC-CCCccccccCCcCCccCCCCCCcccccCcccHHHHHHHHHHHHHhcC----CHHHHhhhhHHHHHHH
Q 007204 424 INGSKTAQVNYL-ASGWVIHHKTDIWAKSSADRGKVVWALWPMGGAWLCTHLWEHYNYTM----DRDFLEKRAYPLLEGC 498 (613)
Q Consensus 424 ~~gr~~A~~~yG-~~G~~~~~~td~wg~t~p~~~~~~~~~w~~g~aWla~~lw~~y~~T~----D~~fL~~~~yP~l~~~ 498 (613)
.......+.+|. -.|..+|.-+.. +. .. ..-.+|.-|.+|.+..+-+-|++.. +. -+......+++.
T Consensus 197 ~q~~~~~~~l~D~~tGl~~h~~~~~-~~-~~----~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~--~~~~~~~~~~~~ 268 (382)
T 3pmm_A 197 YQFLLHVQNLMDRETGLWFHGWNYE-GR-HN----FARARWARGNSWLTMVIPDFLELVDLPEGNA--VRRYLITVLDAQ 268 (382)
T ss_dssp HHHHHHHHHHBCTTTSCBCSEEETT-TT-BC----TTCCCBHHHHHHHHHHHHHHHHHHCCCTTCH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCCCCCeeeeccCC-CC-CC----CCcceecccccHHHHHHHHHHHhhcCCcchh--hHHHHHHHHHHH
Confidence 344444555664 357666643211 10 00 1124688899999999999998831 11 123456788999
Q ss_pred HHHHHHhccccCCCeEEeCC
Q 007204 499 ASFLLDWLIEGHDGYLETNP 518 (613)
Q Consensus 499 A~F~~d~l~~~~~G~~v~~P 518 (613)
|++++.+.- ++|.+...+
T Consensus 269 a~~~~~~q~--~~G~W~~~~ 286 (382)
T 3pmm_A 269 IAALAECQD--DSGLWHTLL 286 (382)
T ss_dssp HHHHHHHCC--TTSCEESBT
T ss_pred HHHHHHcCC--CCCChhhcc
Confidence 999999874 578775443
No 21
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=48.29 E-value=17 Score=39.61 Aligned_cols=93 Identities=8% Similarity=0.078 Sum_probs=63.0
Q ss_pred cHHHHHHHHHHHHHhcCCHHHH--------------hhhhH-HHHHHHHHHHHHhccccCCCeEEeCCCCCCCCcccCCC
Q 007204 466 GGAWLCTHLWEHYNYTMDRDFL--------------EKRAY-PLLEGCASFLLDWLIEGHDGYLETNPSTSPEHEFIAPD 530 (613)
Q Consensus 466 g~aWla~~lw~~y~~T~D~~fL--------------~~~~y-P~l~~~A~F~~d~l~~~~~G~~v~~Ps~SPEn~~~~~~ 530 (613)
+.+..+..+|.|++...+.+++ .+..| |+++..++|..++-.+..-|.+ |.. .
T Consensus 146 ~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~v~~~w~~pd~dlW--------Eer----~ 213 (492)
T 2fba_A 146 GPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDSTGFDLW--------EEN----Q 213 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHHHTHHHHHHHHHHHTTSCEECTT--------SCC----E
T ss_pred chhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHHHHHHHHHHHHHHhcCCCCCCCc--------Ccc----C
Confidence 4577777888877766555543 02356 9999999998887532111222 221 1
Q ss_pred CCcceeecCchHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCCC
Q 007204 531 GKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRL 579 (613)
Q Consensus 531 g~~~~~~~~~t~d~~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~L 579 (613)
--.+|+.++++-.|..+++.++.+|. .+..++|++..+.+
T Consensus 214 -------g~~~~T~~~~~~AL~~aa~lA~~~g~--~~~a~~w~~~ad~i 253 (492)
T 2fba_A 214 -------GRHFFTSLVQQKALAYAVDIAKSFDD--GDFANTLSSTASTL 253 (492)
T ss_dssp -------ECCHHHHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHH
T ss_pred -------CCChHHHHHHHHHHHHHHHHHHHcCC--chHHHHHHHHHHHH
Confidence 12778999999999999999999994 34567787766544
No 22
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=46.53 E-value=47 Score=34.85 Aligned_cols=89 Identities=10% Similarity=0.070 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeE-Ee-CCCCCCCCcccCCCCCcceeecCchHHH
Q 007204 467 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYL-ET-NPSTSPEHEFIAPDGKLACVSYSSTMDM 544 (613)
Q Consensus 467 ~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~-v~-~Ps~SPEn~~~~~~g~~~~~~~~~t~d~ 544 (613)
.|++...+-+ |+.|+|+.+++ +++++.+|....+...++|-| -+ ..+..+.. + ....|+.|
T Consensus 113 ~Af~i~al~~-~~~tg~~~~l~-----~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~------~---~~~~n~~m-- 175 (421)
T 2zbl_A 113 HFFALLGAAS-AVTTGHPEARK-----LLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTE------D---YRGGNANM-- 175 (421)
T ss_dssp HHHHHHHHHH-HHTTTCTTHHH-----HHHHHHHHHHHHTEETTTTEECCEECTTSCSBC------S---CEEHHHHH--
T ss_pred HHHHHHHHHH-HHHhCCccHHH-----HHHHHHHHHHHHhccCCCCCeeeeecCCCCccc------c---cCCCcHHH--
Confidence 5888888888 89999998764 456788888887764434543 23 23222211 1 11222221
Q ss_pred HHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCC
Q 007204 545 AIIREVFSAIISAAEVLEKNEDALVEKVLKSLPR 578 (613)
Q Consensus 545 ~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~ 578 (613)
.++..++++.+++|. +...++.+++++.
T Consensus 176 ----~~~~al~~l~~~tgd--~~~~~~A~~~~~~ 203 (421)
T 2zbl_A 176 ----HAVEAFLIVYDVTHD--KKWLDRALRIASV 203 (421)
T ss_dssp ----HHHHHHHHHHHTTCC--THHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHhhCC--HHHHHHHHHHHHH
Confidence 346677778888884 3344444444433
No 23
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=39.71 E-value=20 Score=38.54 Aligned_cols=111 Identities=8% Similarity=-0.019 Sum_probs=62.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeEE-eCCCCCCC--------------Cc----cc
Q 007204 467 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLE-TNPSTSPE--------------HE----FI 527 (613)
Q Consensus 467 ~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~v-~~Ps~SPE--------------n~----~~ 527 (613)
.+.-.+..|+||+-|||.+|+.+..+..++.+.+=|..-...+..+.|. .-.+..+. .+ ..
T Consensus 165 L~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~F 244 (463)
T 3p2c_A 165 LCYPLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLIVSSF 244 (463)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSSCCBCSB
T ss_pred hhHHHHHHHHHHHhhCChhhhcHHHHHHHHHHHHHHHHHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCCCceecCC
Confidence 4666778889999999999997766666666666555432221122221 11111111 00 00
Q ss_pred CCCCCcceeecCchHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCCC
Q 007204 528 APDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRL 579 (613)
Q Consensus 528 ~~~g~~~~~~~~~t~d~~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~L 579 (613)
.|.. .+++-.=-+-.|.++.-.|+.+.+.++.++. +.++.++|+++.+.+
T Consensus 245 RPSD-Da~~~~~~iPsN~~a~v~L~~aaei~~~l~~-d~~la~~~~~lA~eI 294 (463)
T 3p2c_A 245 RPSD-DATTLQFLVPSNFFAVSSLRKAAEILEKVNK-KTALSKECKDLAQEV 294 (463)
T ss_dssp CTTS-CBCSSSEEHHHHHHHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHH
T ss_pred CCCC-cccccCCCcHHHHHHHHHHHHHHHHHHHhcc-CHHHHHHHHHHHHHH
Confidence 0110 0111111345788999999999999988864 455667777666544
No 24
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=34.70 E-value=96 Score=31.67 Aligned_cols=96 Identities=8% Similarity=0.069 Sum_probs=56.3
Q ss_pred cHHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeE--EeCCCCCCCCcccCCCCCcceeecCchHH
Q 007204 466 GGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYL--ETNPSTSPEHEFIAPDGKLACVSYSSTMD 543 (613)
Q Consensus 466 g~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~--v~~Ps~SPEn~~~~~~g~~~~~~~~~t~d 543 (613)
..+-++..+.+-|+.|+|+.|++ . .+++++.+.+.+...++|.+ ...++..|... +.+ -..++...
T Consensus 173 ~~~~~~~all~l~~~t~d~~~~~-~----A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~---~~~----~~~~pgh~ 240 (388)
T 2gz6_A 173 VPMILANLTLEMEWLLPQETLEN-V----LAATVQEVMGDFLDQEQGLMYENVAPDGSHIDC---FEG----RLINPGHG 240 (388)
T ss_dssp HHHHHHHHHHHTGGGSCHHHHHH-H----HHHHHHHHHHTTEETTTTEECSEECTTSCCCCS---TTT----TEECHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHH-H----HHHHHHHHHHHHhccCCCeEEEEECCCCCCCCC---ccc----CcCCCCHH
Confidence 35677777888899999998875 3 35566666665544456766 55665544210 111 12455555
Q ss_pred HHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCCC
Q 007204 544 MAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRL 579 (613)
Q Consensus 544 ~~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~L 579 (613)
+..++-|+ ++++++| ++.+.+..+++++.+
T Consensus 241 ~e~a~lL~----~~~~~tg--d~~~~~~A~~~~~~~ 270 (388)
T 2gz6_A 241 IEAMWFIM----DIARRKN--DSKTINQAVDVVLNI 270 (388)
T ss_dssp HHHHHHHH----HHHHHTT--CHHHHHHHHHHHHHH
T ss_pred HHHHHHHH----HHHHHcC--CHHHHHHHHHHHHHH
Confidence 66665444 5677787 345555555555543
No 25
>2ww2_A Mannosidase, alpha-1,2-mannosidase; hydrolase, glycoside hydrolase family 92, BT2199; HET: SWA; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvy_A*
Probab=33.61 E-value=2e+02 Score=32.73 Aligned_cols=48 Identities=15% Similarity=0.288 Sum_probs=34.4
Q ss_pred EEEEEeecCCCCCCCCCCCCCChHHHHHHHHH-HhhcCCHHHHHHHHHHHHHhhhccceEE
Q 007204 252 LLLVASSSFDGPFINPSDSKKDPTSESMSALQ-SIRNLSYSDLYTRHLDDYQKLFHRVSIQ 311 (613)
Q Consensus 252 i~~~~~t~y~~~~~~~~~~~~d~~~~~~~~l~-~a~~~~y~~l~~~H~~~~~~l~~r~~l~ 311 (613)
|.+.+++||-+ .. .|.+-|+ .....+|++++++-.+.|.+...|+.|+
T Consensus 229 V~vkvgiSfvS-----------~e-~A~~Nl~~Ei~~~~Fd~v~~~a~~~Wn~~L~~I~V~ 277 (737)
T 2ww2_A 229 LTIRTASSFIS-----------PE-QAAINFNREVADADVQLISGKAREQWNNYLGRVEAE 277 (737)
T ss_dssp EEEEEEEESSC-----------HH-HHHHHHHHHTTTCCHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EEEEEeecccC-----------HH-HHHHHHHHhccCCCHHHHHHHHHHHHHHHhCCEEEe
Confidence 45677778842 23 3334443 3456799999999999999999987775
No 26
>1g9g_A Cellulase CEL48F; processive-endo, hydrolase; 1.90A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1f9o_A* 1fbo_A* 1fce_A* 1fae_A 1fbw_A* 1f9d_A* 2qno_A* 1g9j_A*
Probab=32.55 E-value=1.5e+02 Score=32.24 Aligned_cols=133 Identities=17% Similarity=0.151 Sum_probs=80.9
Q ss_pred CCCCccccccCCcCCcc------------------CCCCCCcccccCcccHHHHHHHHHHHHHhcCCHHHHhhhhHHHHH
Q 007204 435 LASGWVIHHKTDIWAKS------------------SADRGKVVWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLE 496 (613)
Q Consensus 435 G~~G~~~~~~td~wg~t------------------~p~~~~~~~~~w~~g~aWla~~lw~~y~~T~D~~fL~~~~yP~l~ 496 (613)
-.+|.++...||-|... .|+-.+|+...|-.--+|-++-+-|||.-|||. ++-.+|.
T Consensus 365 S~EGaiAGGaTNSw~G~Y~~~Psg~~TFygM~Yd~~PVYhDPpSN~WfG~QaWsmeRvAeyYY~tGd~-----~Ak~ild 439 (629)
T 1g9g_A 365 SAEGAIAGGATNSWNGRYEAVPSGTSTFYGMGYVENPVYADPGSNTWFGMQVWSMQRVAELYYKTGDA-----RAKKLLD 439 (629)
T ss_dssp CSSSCBCCEEESSBTTTTBCCCTTCCEETTEEEESSCSCBTTBTTSBTHHHHHHHHHHHHHHHHHCCH-----HHHHHHH
T ss_pred cccccccccccccCCCccCCCCCCCccccceecccCCccCCCCCCCccccchhhHHHHHHHHHhcccH-----HHHHHHH
Confidence 46788777777777541 123234455567666799999999999999996 3556777
Q ss_pred HHHHHHHHhccccCCCeEEeC--------CCC------CCCCcccCCCCCcceeecCchHHHHHHHHHHHHHHHHHHHhC
Q 007204 497 GCASFLLDWLIEGHDGYLETN--------PST------SPEHEFIAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLE 562 (613)
Q Consensus 497 ~~A~F~~d~l~~~~~G~~v~~--------Ps~------SPEn~~~~~~g~~~~~~~~~t~d~~~ir~l~~~~i~a~~~Lg 562 (613)
.=+...++....+++|.+.++ |++ +|.|. + -. ..+.+.+-|+.++--+-+.++--+...|
T Consensus 440 KWv~W~~~~~~~~~~G~f~iPs~L~WsGqPdtW~~~~s~~gN~----~-lh-v~V~~~g~DvGva~s~A~tL~yYAa~sg 513 (629)
T 1g9g_A 440 KWAKWINGEIKFNADGTFQIPSTIDWEGQPDTWNPTQGYTGNA----N-LH-VKVVNYGTDLGCASSLANTLTYYAAKSG 513 (629)
T ss_dssp HHHHHHHTSCEECTTSCEEEEEEEEEESCCCCCCTTTCCCCCT----T-CE-EEEEEEECCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHhceEECCCCCEecCCcccccCCCCccccCCCCCCCC----C-eE-EEEeecCcchhHHHHHHHHHHHHHhhcc
Confidence 766666666555678876432 211 12221 1 11 1233344477777776666666666666
Q ss_pred CCChHHHHHHHHHhCCCC
Q 007204 563 KNEDALVEKVLKSLPRLR 580 (613)
Q Consensus 563 ~~~~~~~~~w~~~~~~L~ 580 (613)
. .+-....+++|+.|-
T Consensus 514 d--~~ak~~Ak~LLD~~W 529 (629)
T 1g9g_A 514 D--ETSRQNAQKLLDAMW 529 (629)
T ss_dssp C--HHHHHHHHHHHHHHH
T ss_pred c--HHHHHHHHHHHHHHH
Confidence 2 334556677777664
No 27
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=31.49 E-value=65 Score=33.86 Aligned_cols=20 Identities=25% Similarity=0.655 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHhcCCHHHHh
Q 007204 469 WLCTHLWEHYNYTMDRDFLE 488 (613)
Q Consensus 469 Wla~~lw~~y~~T~D~~fL~ 488 (613)
.-.-.+|..|++|+|+.|++
T Consensus 72 F~~G~lw~~ye~Tgd~~~~~ 91 (397)
T 2zzr_A 72 FWTGCLWLAYEYNQDKKLKN 91 (397)
T ss_dssp HHHHHHHHHHHHHCCHHHHH
T ss_pred hHHHHHHHHHHHHCCHHHHH
Confidence 44568899999999988774
No 28
>2wvx_A Mannosidase, putative alpha-1,2-mannosidase; glycoside hydrolase family 92, GH92, hydrolase, BT3990; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvz_A* 2ww0_A* 2ww1_A* 2ww3_A* 2wvx_B* 2wzs_A*
Probab=31.44 E-value=2.8e+02 Score=31.62 Aligned_cols=49 Identities=10% Similarity=0.173 Sum_probs=35.9
Q ss_pred EEEEEEeecCCCCCCCCCCCCCChHHHHHHHHHHhhcCCHHHHHHHHHHHHHhhhccceEE
Q 007204 251 VLLLVASSSFDGPFINPSDSKKDPTSESMSALQSIRNLSYSDLYTRHLDDYQKLFHRVSIQ 311 (613)
Q Consensus 251 ~i~~~~~t~y~~~~~~~~~~~~d~~~~~~~~l~~a~~~~y~~l~~~H~~~~~~l~~r~~l~ 311 (613)
.|.+.+++||- +..+++... +.....+|++++++-.+.|.+...|+.|+
T Consensus 225 ~V~vkvgiSfv-----------S~e~A~~Nl-~Ei~~~~Fd~v~~~a~~~Wn~~L~~I~V~ 273 (744)
T 2wvx_A 225 QVNARIASSFI-----------SFEQAAANM-NELGKDNIEQLAQKGKDAWNQVLGKIEVE 273 (744)
T ss_dssp EEEEEEEEESS-----------CHHHHHHHG-GGGTTCCHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EEEEEEeeccc-----------CHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHhCCEEEc
Confidence 45677788884 333434443 44556799999999999999999987775
No 29
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=29.55 E-value=1.5e+02 Score=30.53 Aligned_cols=54 Identities=9% Similarity=0.089 Sum_probs=38.2
Q ss_pred ccCcccHHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeEE
Q 007204 461 ALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLE 515 (613)
Q Consensus 461 ~~w~~g~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~v 515 (613)
.+|.-|.+|.+..+-+-|++.....--+++....+++.|+++..+..+ +||.+.
T Consensus 209 ~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~-~dG~W~ 262 (373)
T 1nc5_A 209 EFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDK-ETGLWY 262 (373)
T ss_dssp CCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCT-TTSCCB
T ss_pred CcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCC-CCCcee
Confidence 478889999999999999995322112334556788999999988642 278643
No 30
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=28.89 E-value=1e+02 Score=31.91 Aligned_cols=104 Identities=13% Similarity=0.086 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeEE--eCCCCCCCCcccCCCCCcceeecCchHHH
Q 007204 467 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLE--TNPSTSPEHEFIAPDGKLACVSYSSTMDM 544 (613)
Q Consensus 467 ~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~v--~~Ps~SPEn~~~~~~g~~~~~~~~~t~d~ 544 (613)
-|.++..+-+|+ -|+|+++|+ ..+++.++..........|.|. ..|..+++ + . -+.|+
T Consensus 115 ~Af~i~al~~~~-~tgd~~~l~-----~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~-----~--~---~~~n~---- 174 (402)
T 3gt5_A 115 LAFVMLAYSCGL-KVGIKQARE-----WMDETWCLLERHFWDAEYGLYKDEADAQWNFT-----R--Y---RGQNA---- 174 (402)
T ss_dssp HHHHHHHHHHHH-HTTCTTHHH-----HHHHHHHHHHHHTEETTTTEECCEECTTCCBC-----S--C---EEHHH----
T ss_pred HHHHHHHHHHHH-HhCChhHHH-----HHHHHHHHHHHHhcCCcCCCchhhhCCCCCCC-----C--C---CCCCH----
Confidence 578888888855 599998775 3566677777665433356553 34432211 0 0 01222
Q ss_pred HHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCCCCCCCC-CCCCCccccc
Q 007204 545 AIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRLRPTKI-AEDGSIMEWV 594 (613)
Q Consensus 545 ~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~L~p~~i-~~~G~l~EW~ 594 (613)
.-.++.+++.+.++.| ++...++.+++++.+...-+ .+.|.|.|..
T Consensus 175 --~m~l~eall~L~~~tg--d~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~ 221 (402)
T 3gt5_A 175 --NMHMCEAMLAAYEASG--EQRYLERALVLADRITRRQAAKADGLVWEHY 221 (402)
T ss_dssp --HHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHTHHHHTTTTSCCSEE
T ss_pred --HHHHHHHHHHHHHhhC--CHHHHHHHHHHHHHHHHHhhCccCCeeEEEE
Confidence 1245566777888888 34566666666554433212 2346676665
No 31
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=28.37 E-value=26 Score=37.26 Aligned_cols=110 Identities=13% Similarity=0.021 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeEE-eCCCCCCC--------------C-----cc
Q 007204 467 GAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYLE-TNPSTSPE--------------H-----EF 526 (613)
Q Consensus 467 ~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~v-~~Ps~SPE--------------n-----~~ 526 (613)
.+.-.+..|+||+.|||.+|+.+..+..++.+.+=|..--.....+.|. .-++..+. . .|
T Consensus 137 L~~~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~S~F 216 (427)
T 3qt9_A 137 LCYPVRLIHKYWKESGDETFFNYDIKKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTWSGF 216 (427)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCCHHHHHHHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCCCSB
T ss_pred hHHHHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCceecCC
Confidence 5677788899999999999997666666666665554432111112221 11111111 1 11
Q ss_pred cCCCCCcceeecCchHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCCC
Q 007204 527 IAPDGKLACVSYSSTMDMAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPRL 579 (613)
Q Consensus 527 ~~~~g~~~~~~~~~t~d~~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~L 579 (613)
. |.. .+++-.=-+..|.++.-.|+.+.+.++.++. +.++.++|++..+.+
T Consensus 217 R-PSD-Da~~~~~~iPsN~~a~vaL~~~aei~~~l~~-d~~La~~~~~la~eI 266 (427)
T 3qt9_A 217 R-PSD-DACEYGYLIPANMFAVVALRYISEIAEKVYK-DEELKEKADSLREEI 266 (427)
T ss_dssp C-TTS-CBCSSSEEHHHHHHHHHHHHHHHHHHHHTSC-CHHHHHHHHHHHHHH
T ss_pred C-CCC-cccccCCCcHHHHHHHHHHHHHHHHHHHhcc-CHHHHHHHHHHHHHH
Confidence 1 110 0111111345788998999999999988864 455667776655543
No 32
>2xsg_A Ccman5; hydrolase, mannosidase; HET: B3P; 2.00A {Cellulosimicrobium cellulans}
Probab=27.99 E-value=4.1e+02 Score=30.37 Aligned_cols=48 Identities=17% Similarity=0.206 Sum_probs=34.5
Q ss_pred EEEEEeecCCCCCCCCCCCCCChHHHHHHHH-HHhhcCCHHHHHHHHHHHHHhhhccceEE
Q 007204 252 LLLVASSSFDGPFINPSDSKKDPTSESMSAL-QSIRNLSYSDLYTRHLDDYQKLFHRVSIQ 311 (613)
Q Consensus 252 i~~~~~t~y~~~~~~~~~~~~d~~~~~~~~l-~~a~~~~y~~l~~~H~~~~~~l~~r~~l~ 311 (613)
|.+.++.||-+ .. .|.+-| ......+|++++++-.+.|.+...|+.|+
T Consensus 248 V~vkvgiS~vS-----------~e-qA~~Nl~~Ei~~~~Fd~v~~~a~~~Wn~~L~rI~V~ 296 (774)
T 2xsg_A 248 IGLQVTLSPVS-----------VE-QARIDQQVELGDLSFDAIRDRTRAEWNATLGRVAID 296 (774)
T ss_dssp EEEEEEEESSC-----------HH-HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTEEEE
T ss_pred EEEEEEECccC-----------HH-HHHHHHHHhcCCCCHHHHHHHHHHHHHHHhCCEEEe
Confidence 45677777742 23 333444 33456799999999999999999988776
No 33
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=26.35 E-value=54 Score=33.70 Aligned_cols=39 Identities=18% Similarity=0.131 Sum_probs=26.5
Q ss_pred ccccCcccHHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHH
Q 007204 459 VWALWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLD 504 (613)
Q Consensus 459 ~~~~w~~g~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d 504 (613)
.|.+|-.+++| ..+|++|++|+|++|++ +++++++|...
T Consensus 42 ~~~yWW~a~~~--~~l~d~~~~tgd~~y~~-----~a~~~~~~~~~ 80 (349)
T 3k7x_A 42 VFNYWWLAHLV--EVRLDAYLRTKKQADLE-----VAEKTYLHNKN 80 (349)
T ss_dssp SCCHHHHHHHH--HHHHHHHHHHCCHHHHH-----HHHHHHHHHHH
T ss_pred CCCccHHHHHH--HHHHHHHHHhCCHHHHH-----HHHHHHHHHHh
Confidence 35556555664 89999999999999874 23444445443
No 34
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=25.45 E-value=2.5e+02 Score=28.95 Aligned_cols=100 Identities=13% Similarity=0.168 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHHHHHhccccCCCeE--EeCCCCCCCCcccCCCCCc--ceeecCchHH
Q 007204 468 AWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASFLLDWLIEGHDGYL--ETNPSTSPEHEFIAPDGKL--ACVSYSSTMD 543 (613)
Q Consensus 468 aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F~~d~l~~~~~G~~--v~~Ps~SPEn~~~~~~g~~--~~~~~~~t~d 543 (613)
+-++..+..-|+.|+|..|++ ++-.++. ++.+.+...++|.+ ...++.+|.-.+...++.. -+-..++..+
T Consensus 176 m~l~eall~L~~~tgd~~~~~-~a~~l~~----~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~ 250 (402)
T 3gt5_A 176 MHMCEAMLAAYEASGEQRYLE-RALVLAD----RITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQ 250 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHH-HHHHHHH----HHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHH
T ss_pred HHHHHHHHHHHHhhCCHHHHH-HHHHHHH----HHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChH
Confidence 457788889999999999885 4544444 44443332234542 3445555432110000000 0113678899
Q ss_pred HHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhCC
Q 007204 544 MAIIREVFSAIISAAEVLEKNEDALVEKVLKSLPR 578 (613)
Q Consensus 544 ~~~ir~l~~~~i~a~~~Lg~~~~~~~~~w~~~~~~ 578 (613)
++.++-|++ ++++++. +.+.+..+++.+.
T Consensus 251 iE~awlLl~----~~~~~~~--~~~~~~A~~l~~~ 279 (402)
T 3gt5_A 251 TEWAKLLLI----LDRYIEV--EWLVPVARSLFDV 279 (402)
T ss_dssp HHHHHHHHH----HHHHCCC--TTHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHHhhCc--HHHHHHHHHHHHH
Confidence 998887665 4566774 3355555555443
No 35
>2l7y_A Putative endo-beta-N-acetylglucosaminidase; putative surface protein, structural protein; NMR {Streptococcus pneumoniae}
Probab=22.10 E-value=56 Score=27.41 Aligned_cols=50 Identities=20% Similarity=0.319 Sum_probs=37.6
Q ss_pred EEeeccccEEEEEEEeCCEEEEEEEEeecCCCEEEEEEEeCCCCceEEEEEecc
Q 007204 126 RELDLNTATARVKYSVGNVEFTREHFSSNPDQVIVTKISGSESGSLSFNVSLDS 179 (613)
Q Consensus 126 R~LDl~~a~~~v~~~~~g~~~~re~F~S~pd~viv~~i~a~~~~~l~~~~~l~~ 179 (613)
-.|||.-+++++.|..|.. +...--+++|.|--+.++++|...++|++..
T Consensus 23 E~LDltGl~v~~~YsDgt~----~~~~lt~~~v~VsGfDs~~~G~QtlTVtY~G 72 (98)
T 2l7y_A 23 DSLDLSEGRFAVAYSNDTM----EEHSFTDEGVEISGYDAQKTGRQTLTLHYQG 72 (98)
T ss_dssp TCCCCCSCEEEEEETTSCE----EEEESCCTTSEEESCCTTSCSSEEEEEEETT
T ss_pred CccccCCCEEEEEEcCCCE----EEEecccCCcEEEccCCCCCCcEEEEEEECC
Confidence 4799999999999996632 2222234578888888888888888888753
No 36
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=21.13 E-value=78 Score=32.46 Aligned_cols=39 Identities=13% Similarity=0.008 Sum_probs=30.4
Q ss_pred cCcccHHHHHHHHHHHHHhcCCHHHHhhhhHHHHHHHHHH
Q 007204 462 LWPMGGAWLCTHLWEHYNYTMDRDFLEKRAYPLLEGCASF 501 (613)
Q Consensus 462 ~w~~g~aWla~~lw~~y~~T~D~~fL~~~~yP~l~~~A~F 501 (613)
.|.-+.+|+...+-+.|++|+|+.||+ ++-.++..+.+.
T Consensus 210 ~~tYnqg~~l~g~~~LY~~T~d~~yl~-~a~~l~~~~~~~ 248 (349)
T 3k7x_A 210 KFTYNQGVYIGANLELYRITKEAIYLD-TANKTAAISLKE 248 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCHHHHH-HHHHHHHHHHHH
T ss_pred eeeHHHHHHHHHHHHHHHhhCcHHHHH-HHHHHHHHHHHH
Confidence 455677999999999999999999997 566666555443
Done!