Your job contains 1 sequence.
>007205
MSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCTQTQKSI
KSKNVENSGNNTGSNDEDNNGSIGVNGGDGSDDGSGTQSSWTKKAVEVDSPRHMSPSDQL
AECPDSTCAQVIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLDLQ
LEYQTESPIKLVGTKKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLAGAITK
IIDSDKEDTEYEASNKPSKILDINSKSIKDSKELPSLELSLKRLRGVKDIGTTIQDDRNV
LRRSDSSAFSRYNTASNVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSS
NGGSNNMDMGSTTNNAFIKPAGLKNKSEVSSTVNCLHSSSFQPTKNDLLCSPRQVLLDKR
DDLVASSVLVHPRSTQEQLTQHYDNCHHLVHNMQQQHLPHDHDQLSLKKMAEAVPQCGSS
NMLGGFVEGNAGNYSINGSASGSNHGSNGQNGSSTAVNAGGMNVESDNGIAGKSGSGGAS
GSGSGSGNRIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ
TANENTSREPECS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 007205
(613 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2151206 - symbol:PRR7 "pseudo-response regulat... 817 2.0e-81 1
TAIR|locus:2044376 - symbol:PRR9 "pseudo-response regulat... 176 1.1e-25 3
TAIR|locus:2163198 - symbol:TOC1 "TIMING OF CAB EXPRESSIO... 170 1.5e-19 3
TAIR|locus:2062749 - symbol:AT2G46670 "AT2G46670" species... 176 2.1e-14 2
TAIR|locus:2172545 - symbol:COL5 "CONSTANS-like 5" specie... 145 4.9e-07 1
TAIR|locus:2047246 - symbol:COL3 "CONSTANS-like 3" specie... 138 1.9e-06 1
TAIR|locus:2031581 - symbol:BBX16 "B-box domain protein 1... 138 1.9e-06 2
TAIR|locus:2175564 - symbol:CIA2 "chloroplast import appa... 139 3.4e-06 1
TAIR|locus:2007482 - symbol:AT1G07050 "AT1G07050" species... 128 4.4e-06 1
UNIPROTKB|Q9FDX8 - symbol:HD1 "Zinc finger protein HD1" s... 132 9.0e-06 2
UNIPROTKB|Q9FE92 - symbol:Hd1 "Heading day 1" species:453... 132 1.0e-05 2
TAIR|locus:2018344 - symbol:AT1G04500 "AT1G04500" species... 124 1.5e-05 2
TAIR|locus:2028421 - symbol:BBX17 "B-box domain protein 1... 130 1.9e-05 1
TAIR|locus:2074587 - symbol:COL2 "CONSTANS-like 2" specie... 129 2.4e-05 2
TAIR|locus:2195518 - symbol:AT1G63820 species:3702 "Arabi... 128 2.5e-05 1
TAIR|locus:2201277 - symbol:BBX14 "B-box domain protein 1... 130 2.9e-05 1
TAIR|locus:2031180 - symbol:BBX15 "B-box domain protein 1... 130 3.1e-05 1
TAIR|locus:2143221 - symbol:COL1 "CONSTANS-like 1" specie... 132 4.0e-05 2
TAIR|locus:2168083 - symbol:AT5G59990 "AT5G59990" species... 119 4.8e-05 2
TAIR|locus:2145698 - symbol:AT5G14370 species:3702 "Arabi... 125 0.00020 2
TAIR|locus:2177911 - symbol:AT5G41380 "AT5G41380" species... 120 0.00022 1
TAIR|locus:2143206 - symbol:CO "CONSTANS" species:3702 "A... 123 0.00030 2
TAIR|locus:2132902 - symbol:AT4G27900 "AT4G27900" species... 116 0.00042 1
TAIR|locus:2051099 - symbol:AT2G33350 "AT2G33350" species... 121 0.00053 2
CGD|CAL0003874 - symbol:PGA55 species:5476 "Candida albic... 125 0.00054 1
UNIPROTKB|Q59SG9 - symbol:PGA55 "Flocculin-like protein" ... 125 0.00054 1
TAIR|locus:2141020 - symbol:APRR2 species:3702 "Arabidops... 97 0.00064 2
TAIR|locus:2093668 - symbol:RR1 "response regulator 1" sp... 120 0.00080 1
>TAIR|locus:2151206 [details] [associations]
symbol:PRR7 "pseudo-response regulator 7" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0010017 "red or far-red light signaling
pathway" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009639 "response to red or far red light" evidence=RCA]
[GO:0042752 "regulation of circadian rhythm" evidence=RCA]
[GO:0048574 "long-day photoperiodism, flowering" evidence=RCA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005739
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892
GO:GO:0035556 GO:GO:0003677 GO:GO:0007623 GO:GO:0006351
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 EMBL:AB046954
EMBL:AL162973 EMBL:AY039943 EMBL:AY142560 IPI:IPI00520937
PIR:T48302 RefSeq:NP_568107.1 UniGene:At.20552
ProteinModelPortal:Q93WK5 SMR:Q93WK5 STRING:Q93WK5 PRIDE:Q93WK5
EnsemblPlants:AT5G02810.1 GeneID:831793 KEGG:ath:AT5G02810
GeneFarm:4348 TAIR:At5g02810 eggNOG:COG3437 HOGENOM:HOG000034018
InParanoid:Q93WK5 KO:K12129 OMA:HDERNIL PhylomeDB:Q93WK5
ProtClustDB:CLSN2917538 Genevestigator:Q93WK5 GermOnline:AT5G02810
GO:GO:0010017 GO:GO:0009266 Uniprot:Q93WK5
Length = 727
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 200/416 (48%), Positives = 247/416 (59%)
Query: 1 MSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHXXXXXXXXXCT-QTQKS 59
MSS DSMGLVFKCLSKGAVDFLVKPIRKNELK LWQHVWRRC T QTQKS
Sbjct: 159 MSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQHVWRRCQSSSGSGSESGTHQTQKS 218
Query: 60 IKSKNVENSGNNTGSNDEXXXXXXXXXXXXXXXXXXXTQSSWTKKAVEVD-SPRHMSPSD 118
+KSK+++ S ++GS+DE QSSWTKKAV+VD SPR +S D
Sbjct: 219 VKSKSIKKSDQDSGSSDENENGSIGLNASDGSSDGSGAQSSWTKKAVDVDDSPRAVSLWD 278
Query: 119 QLAECPDSTCAQVIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDVGGQRSLD 178
++ DSTCAQV+HSN E ++ V A KE Q+H+++ E+ RDL++ +R+ D
Sbjct: 279 RV----DSTCAQVVHSNPEFPSNQLVAPPAEKETQEHDDKFEDVTM-GRDLEISIRRNCD 333
Query: 179 LQLEYQTESPIKLVGT-KKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLAGA 237
L LE + E K G ++ N + SSK ++ +G LDL+SESPSSK +E G+
Sbjct: 334 LALEPKDEPLSKTTGIMRQDNSFEKSSSKWKMKVGKGPLDLSSESPSSKQMHEDG---GS 390
Query: 238 ITKIIDSDKEDT-EYEASNKPSKILDINSKSIKDSXXXXXXXXXXXXXXGVKDIGTTIQD 296
K + S +D E EA N K LD N S+K S G KD GT ++D
Sbjct: 391 SFKAMSSHLQDNREPEAPNTHLKTLDTNEASVKISEELMHVEHSSKRHRGTKDDGTLVRD 450
Query: 297 DRNVLRRSDSSAFSRYNTASNVNKGPGGNIESAS-QVVNSLEIIKKGSDCGIQSHSNGD- 354
DRNVLRRS+ SAFSRYN ASN NK GGN+ S S Q NS ++IKK ++ HSN +
Sbjct: 451 DRNVLRRSEGSAFSRYNPASNANKISGGNLGSTSLQDNNSQDLIKK-TEAAYDCHSNMNE 509
Query: 355 --PLNQSSNGGSNNMDMGSTT-NNAFIKPAGLKNKSEVSSTVNCLHSSSFQPTKND 407
P N S+ GSNN DM STT NNAF KP K S SS+V HSS FQP D
Sbjct: 510 SLPHNHRSHVGSNNFDMSSTTENNAFTKPGAPKVSSAGSSSVK--HSS-FQPLPCD 562
Score = 297 (109.6 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 88/257 (34%), Positives = 123/257 (47%)
Query: 352 NGDPLNQSSNGGSNNMDMGSTTNNAFIKPAGLKNKSEVSSTVNCLHSSSFQ---PTKNDL 408
+G L +S +N+ D+ T A+ + + N+S + + + S++F T+N+
Sbjct: 476 SGGNLGSTSLQDNNSQDLIKKTEAAYDCHSNM-NESLPHNHRSHVGSNNFDMSSTTENNA 534
Query: 409 LCSPRQVLLDKRDDLVASSVLVHPRSTQEQLTQHYDNCHHLVHNMXXXXXXXXXXXXSLK 468
P + SS + H S Q H++N H +N+ K
Sbjct: 535 FTKPGAPKVSS----AGSSSVKHS-SFQPLPCDHHNN--HASYNLVHVAER--------K 579
Query: 469 KMAEAVPQCGSSNMLGGFVEGNAG--NYXXXXXXXXXXXXXXXXXXXXTAVNAGGMNVES 526
K+ PQCGSSN+ +EGN NY +NAGGMN+ S
Sbjct: 580 KLP---PQCGSSNVYNETIEGNNNTVNYSVNGSVSGSGHGSNGPYGSSNGMNAGGMNMGS 636
Query: 527 DNXXXXXXXXXXXXXXXXXXX-NRIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKR 585
DN N D+NK + REAA+TK+RQK+ ERCFRKKVRYQSRK+
Sbjct: 637 DNGAGKNGNGDGSGSGSGSGSGNLADENKISQREAALTKFRQKRKERCFRKKVRYQSRKK 696
Query: 586 LAEQRPRIRGQFVRQTA 602
LAEQRPR+RGQFVR+TA
Sbjct: 697 LAEQRPRVRGQFVRKTA 713
>TAIR|locus:2044376 [details] [associations]
symbol:PRR9 "pseudo-response regulator 9" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0007623 "circadian rhythm"
evidence=IMP;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009266 "response to temperature stimulus" evidence=IGI]
[GO:0010017 "red or far-red light signaling pathway" evidence=IMP]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072 Pfam:PF06203
PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0006351 GO:GO:0000156
InterPro:IPR011006 SUPFAM:SSF52172 HOGENOM:HOG000034018
GO:GO:0010017 GO:GO:0009266 EMBL:AB046953 EMBL:AF272040
EMBL:AC005310 EMBL:AY099676 EMBL:AY128856 IPI:IPI00545462
PIR:T02680 RefSeq:NP_566085.1 UniGene:At.1675 UniGene:At.65052
ProteinModelPortal:Q8L500 SMR:Q8L500 STRING:Q8L500 PRIDE:Q8L500
EnsemblPlants:AT2G46790.1 GeneID:819292 KEGG:ath:AT2G46790
GeneFarm:4360 TAIR:At2g46790 eggNOG:COG0745 InParanoid:Q8L500
KO:K12128 OMA:HEACKNI PhylomeDB:Q8L500 ProtClustDB:CLSN2688972
Genevestigator:Q8L500 GermOnline:AT2G46790 Uniprot:Q8L500
Length = 468
Score = 176 (67.0 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 556 ADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANENTS 607
+ REAA+ K+R K+ +RCF KKVRYQSRK+LAEQRPR++GQFVR T N + S
Sbjct: 415 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR-TVNSDAS 465
Score = 170 (64.9 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 29/41 (70%), Positives = 36/41 (87%)
Query: 1 MSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 41
MSS DS+ +V KC+ +GA D+L+KP+RKNELKNLWQHVWRR
Sbjct: 118 MSSQDSIKMVLKCMLRGAADYLIKPMRKNELKNLWQHVWRR 158
Score = 62 (26.9 bits), Expect = 1.1e-25, Sum P(3) = 1.1e-25
Identities = 27/98 (27%), Positives = 44/98 (44%)
Query: 301 LRRSDSSAFSRYNTASNVNKGPGGNIESAS----QVVNSLEIIKK-GSDCG-IQSHSNGD 354
L SD+SAFSR+ + + K ES S S E ++K SD G + SN +
Sbjct: 281 LSLSDASAFSRFEESKSAEKAVVALEESTSGEPKTPTESHEKLRKVTSDQGSATTSSNQE 340
Query: 355 PLNQSSNGGSNNMDMGSTTNNAFIKPAGLKNKSEVSST 392
+ SS N + + TN P +++ E +++
Sbjct: 341 NIGSSSVSFRNQVLQSTVTNQKQDSPIPVESNREKAAS 378
Score = 39 (18.8 bits), Expect = 2.5e-23, Sum P(3) = 2.5e-23
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 194 TKKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLAGAITKIIDSDKEDT 249
T +N+ ++GSS +S + Q + ++ S + E+ + A +K +++ + T
Sbjct: 334 TTSSNQENIGSSSVSFRNQVLQSTVTNQKQDSPIPVESNREKAA-SKEVEAGSQST 388
>TAIR|locus:2163198 [details] [associations]
symbol:TOC1 "TIMING OF CAB EXPRESSION 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS;TAS] [GO:0007623 "circadian rhythm"
evidence=IEP;RCA;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010031 "circumnutation" evidence=IMP] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0010629 "negative regulation of gene expression"
evidence=IDA] [GO:0009639 "response to red or far red light"
evidence=RCA] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] [GO:0048574 "long-day photoperiodism, flowering"
evidence=RCA] InterPro:IPR001789 InterPro:IPR010402 Pfam:PF00072
Pfam:PF06203 PROSITE:PS50110 PROSITE:PS51017 SMART:SM00448
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0007623 GO:GO:0003700 GO:GO:0006351
GO:GO:0010629 GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172
EMBL:AB041530 EMBL:AF272039 EMBL:AJ251086 EMBL:AB010073
EMBL:AY094393 EMBL:BT005816 IPI:IPI00517214 PIR:T52075 PIR:T52076
RefSeq:NP_200946.1 UniGene:At.21919 ProteinModelPortal:Q9LKL2
SMR:Q9LKL2 IntAct:Q9LKL2 STRING:Q9LKL2 EnsemblPlants:AT5G61380.1
GeneID:836259 KEGG:ath:AT5G61380 GeneFarm:4313 TAIR:At5g61380
eggNOG:NOG242953 HOGENOM:HOG000034017 InParanoid:Q9LKL2 KO:K12127
OMA:IPIIMMS PhylomeDB:Q9LKL2 ProtClustDB:CLSN2686914
Genevestigator:Q9LKL2 GermOnline:AT5G61380 GO:GO:0010031
Uniprot:Q9LKL2
Length = 618
Score = 170 (64.9 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 548 NRIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQT--ANEN 605
N + NK RE A+ K+R+K+ +RCF KK+RY +RKRLAE+RPR++GQFVR+ N +
Sbjct: 523 NEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVD 582
Query: 606 TSREPE 611
+ +P+
Sbjct: 583 LNGQPD 588
Score = 139 (54.0 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 25/41 (60%), Positives = 30/41 (73%)
Query: 1 MSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 41
MS D + +V KCL GA D+LVKP+R NEL NLW H+WRR
Sbjct: 100 MSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHMWRR 140
Score = 46 (21.3 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 22/110 (20%), Positives = 46/110 (41%)
Query: 329 ASQVVNSLEIIKKGSDCGIQSHSNG-DPLNQSSNGGSNNMDMGSTTNNAFIKPAGLKNKS 387
AS+ +N+ + ++ + +NG DP + NG S+++ G+ + G+ N
Sbjct: 309 ASEGINNTKQARRATPKSTVLRTNGQDPPLVNGNG-SHHLHRGAAEKFQVVASEGINNTK 367
Query: 388 EVSSTVNCLHSSSFQPTKNDLLCSPRQVLLDKRDDLVASSVLVHPRSTQE 437
+ + S T + P + +R + +S+ H R+ QE
Sbjct: 368 QAHRSRGTEQYHSQGETLQNGASYPHSL---ERSRTLPTSMESHGRNYQE 414
>TAIR|locus:2062749 [details] [associations]
symbol:AT2G46670 "AT2G46670" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 GenomeReviews:CT485783_GR UniGene:At.65052
EMBL:AB493594 IPI:IPI00540845 RefSeq:NP_182190.2
EnsemblPlants:AT2G46670.1 GeneID:819279 KEGG:ath:AT2G46670
TAIR:At2g46670 PhylomeDB:C0SV91 Genevestigator:Q3EBF0
Uniprot:C0SV91
Length = 183
Score = 176 (67.0 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 34/52 (65%), Positives = 43/52 (82%)
Query: 556 ADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANENTS 607
+ REAA+ K+R K+ +RCF KKVRYQSRK+LAEQRPR++GQFVR T N + S
Sbjct: 130 SQREAALMKFRLKRKDRCFDKKVRYQSRKKLAEQRPRVKGQFVR-TVNSDAS 180
Score = 39 (18.8 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 12/56 (21%), Positives = 29/56 (51%)
Query: 194 TKKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEAAKLAGAITKIIDSDKEDT 249
T +N+ ++GSS +S + Q + ++ S + E+ + A +K +++ + T
Sbjct: 49 TTSSNQENIGSSSVSFRNQVLQSTVTNQKQDSPIPVESNREKAA-SKEVEAGSQST 103
>TAIR|locus:2172545 [details] [associations]
symbol:COL5 "CONSTANS-like 5" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042631 "cellular response to water deprivation" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AB018118 HOGENOM:HOG000238833 EMBL:AY057632
EMBL:AY080747 EMBL:AY114006 EMBL:AY088432 IPI:IPI00531436
RefSeq:NP_568863.1 UniGene:At.20797 IntAct:Q9FHH8 STRING:Q9FHH8
PRIDE:Q9FHH8 EnsemblPlants:AT5G57660.1 GeneID:835872
KEGG:ath:AT5G57660 TAIR:At5g57660 eggNOG:NOG321782
InParanoid:Q9FHH8 OMA:YSSYTAT PhylomeDB:Q9FHH8
ProtClustDB:CLSN2917767 Genevestigator:Q9FHH8 GermOnline:AT5G57660
Uniprot:Q9FHH8
Length = 355
Score = 145 (56.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 557 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANEN 605
DREA V +YR+K+ R F K +RY SRK AE RPRI+G+F ++T EN
Sbjct: 284 DREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETEN 332
>TAIR|locus:2047246 [details] [associations]
symbol:COL3 "CONSTANS-like 3" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010099 "regulation of
photomorphogenesis" evidence=IMP] [GO:0010161 "red light signaling
pathway" evidence=IMP] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010114 "response to red light" evidence=RCA]
[GO:0010155 "regulation of proton transport" evidence=RCA]
[GO:0010218 "response to far red light" evidence=RCA] [GO:0032880
"regulation of protein localization" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC006585 EMBL:AC007266 GO:GO:0010161
GO:GO:0010099 HOGENOM:HOG000238833 EMBL:AY058130 EMBL:AY140103
EMBL:BT002107 EMBL:AY085729 IPI:IPI00519735 PIR:E84640
RefSeq:NP_180052.1 UniGene:At.24362 ProteinModelPortal:Q9SK53
IntAct:Q9SK53 STRING:Q9SK53 EnsemblPlants:AT2G24790.1 GeneID:817016
KEGG:ath:AT2G24790 TAIR:At2g24790 eggNOG:NOG277018
InParanoid:Q9SK53 OMA:TDSREND PhylomeDB:Q9SK53
ProtClustDB:CLSN2912944 Genevestigator:Q9SK53 Uniprot:Q9SK53
Length = 294
Score = 138 (53.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 556 ADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQT-ANEN 605
A+REA V +YR+K+ R F K +RY SRK AE RPRI+G+F ++T + EN
Sbjct: 227 AEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSREN 277
>TAIR|locus:2031581 [details] [associations]
symbol:BBX16 "B-box domain protein 16" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0009641 "shade avoidance" evidence=IMP] [GO:0010223 "secondary
shoot formation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 EMBL:AC016662 HOGENOM:HOG000240360 EMBL:BT015740
EMBL:BT020183 IPI:IPI00516267 PIR:C96766 RefSeq:NP_177528.1
UniGene:At.34943 IntAct:Q9C9A9 STRING:Q9C9A9
EnsemblPlants:AT1G73870.1 GeneID:843723 KEGG:ath:AT1G73870
TAIR:At1g73870 eggNOG:NOG320376 InParanoid:Q9C9A9 OMA:EAKCENG
PhylomeDB:Q9C9A9 ProtClustDB:CLSN2914358 Genevestigator:Q9C9A9
GermOnline:AT1G73870 Uniprot:Q9C9A9
Length = 392
Score = 138 (53.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 25/46 (54%), Positives = 37/46 (80%)
Query: 557 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTA 602
+REA V +Y++K+ R F KK+RY+ RK AEQRPRI+G+FV++T+
Sbjct: 344 EREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKRTS 389
Score = 45 (20.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 238 ITKIIDSDKEDTEYEASNKPSKILDINSKSIKD 270
+ ++ D D+E+ E + N SK D + + KD
Sbjct: 240 LKRVKDEDEEEEEAKCENGGSKDSDREASNDKD 272
Score = 44 (20.5 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 153 QDHEERCENFAKRSRDLDVGGQR----SLDLQLEY 183
++ E +CEN + D + + SL L+L+Y
Sbjct: 249 EEEEAKCENGGSKDSDREASNDKDRKTSLFLRLDY 283
>TAIR|locus:2175564 [details] [associations]
symbol:CIA2 "chloroplast import apparatus 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEP] [GO:0045036 "protein targeting to chloroplast"
evidence=RCA;IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] InterPro:IPR010402
Pfam:PF06203 PROSITE:PS51017 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 EMBL:AB023042 EMBL:AF359387
EMBL:AF372929 EMBL:AY078036 EMBL:AK316813 EMBL:AK221521
IPI:IPI00517190 IPI:IPI00544089 IPI:IPI00656805
RefSeq:NP_001032087.1 RefSeq:NP_568852.2 RefSeq:NP_851201.1
UniGene:At.9681 IntAct:Q9LU68 STRING:Q9LU68 PaxDb:Q9LU68
PRIDE:Q9LU68 EnsemblPlants:AT5G57180.2 GeneID:835824
KEGG:ath:AT5G57180 GeneFarm:2245 TAIR:At5g57180 eggNOG:NOG245310
HOGENOM:HOG000238782 InParanoid:Q9LU68 OMA:YLRSLMV PhylomeDB:Q9LU68
ProtClustDB:CLSN2680548 Genevestigator:Q9LU68 GO:GO:0045036
Uniprot:Q9LU68
Length = 435
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 27/49 (55%), Positives = 39/49 (79%)
Query: 558 REAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANENT 606
REA+V +Y++K+ R F KK+RYQ RK A+QRPR++G+FVR+ NE+T
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRRP-NEST 430
>TAIR|locus:2007482 [details] [associations]
symbol:AT1G07050 "AT1G07050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0007623 "circadian rhythm" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AY085907 EMBL:AK176556 EMBL:AB493438
IPI:IPI00532995 RefSeq:NP_563778.1 UniGene:At.42316 STRING:Q8LDM8
EnsemblPlants:AT1G07050.1 GeneID:837216 KEGG:ath:AT1G07050
TAIR:At1g07050 eggNOG:NOG283732 HOGENOM:HOG000090331
InParanoid:Q8LDM8 OMA:NMRREAS PhylomeDB:Q8LDM8
ProtClustDB:CLSN2687713 ArrayExpress:Q8LDM8 Genevestigator:Q8LDM8
Uniprot:Q8LDM8
Length = 195
Score = 128 (50.1 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 23/51 (45%), Positives = 38/51 (74%)
Query: 550 IDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 600
I++ + REA+V +Y++K+ R F KK+RYQ RK A++RPR +G+FV++
Sbjct: 143 IEEKRNMRREASVLRYKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193
>UNIPROTKB|Q9FDX8 [details] [associations]
symbol:HD1 "Zinc finger protein HD1" species:39947 "Oryza
sativa Japonica Group" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048571 "long-day photoperiodism" evidence=IEP] [GO:0048572
"short-day photoperiodism" evidence=IEP] [GO:0048576 "positive
regulation of short-day photoperiodism, flowering" evidence=IMP]
[GO:0048579 "negative regulation of long-day photoperiodism,
flowering" evidence=IMP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0045892 GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 EMBL:AP008212 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0009908 GO:GO:0009909 GO:GO:0010229
eggNOG:NOG281690 OMA:RVCEACE GO:GO:0048579 GO:GO:0048576
EMBL:AB041837 EMBL:AB041838 EMBL:AB375859 EMBL:AP003044
EMBL:AP005813 RefSeq:NP_001057378.1 UniGene:Os.1189 STRING:Q9FDX8
EnsemblPlants:LOC_Os06g16370.1 GeneID:4340746 KEGG:osa:4340746
Gramene:Q9FDX8 ProtClustDB:CLSN2696123 GO:GO:0048571 GO:GO:0048572
Uniprot:Q9FDX8
Length = 395
Score = 132 (51.5 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 557 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQT 601
DREA V +YR+KK R F K +RY++RK AE RPRI+G+F +++
Sbjct: 325 DREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRS 369
Score = 45 (20.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 333 VNSLEIIKKGSDCGIQSHSNGD-PLNQSSNGGSNNMDM 369
V+S ++ K SD +++N D N ++N S+N M
Sbjct: 140 VDSWLLLSKDSDNNNNNNNNNDNDNNDNNNSNSSNNGM 177
Score = 42 (19.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 62 SKNVENSGNNTGSND 76
SK+ +N+ NN +ND
Sbjct: 147 SKDSDNNNNNNNNND 161
>UNIPROTKB|Q9FE92 [details] [associations]
symbol:Hd1 "Heading day 1" species:4530 "Oryza sativa"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=ISS] [GO:0010229
"inflorescence development" evidence=IGI] [GO:0048571 "long-day
photoperiodism" evidence=IEP] [GO:0048572 "short-day
photoperiodism" evidence=IEP] InterPro:IPR000315 InterPro:IPR010402
Pfam:PF06203 PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336
GO:GO:0005634 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0009909 GO:GO:0010229 GO:GO:0048571 GO:GO:0048572
EMBL:JN402207 EMBL:AB041840 EMBL:AB041842 Gramene:Q9FE92
Genevestigator:Q9FE92 Uniprot:Q9FE92
Length = 407
Score = 132 (51.5 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 557 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQT 601
DREA V +YR+KK R F K +RY++RK AE RPRI+G+F +++
Sbjct: 337 DREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRS 381
Score = 45 (20.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 333 VNSLEIIKKGSDCGIQSHSNGD-PLNQSSNGGSNNMDM 369
V+S ++ K SD +++N D N ++N S+N M
Sbjct: 152 VDSWLLLSKDSDNNNNNNNNNDNDNNDNNNSNSSNNGM 189
Score = 42 (19.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 62 SKNVENSGNNTGSND 76
SK+ +N+ NN +ND
Sbjct: 159 SKDSDNNNNNNNNND 173
>TAIR|locus:2018344 [details] [associations]
symbol:AT1G04500 "AT1G04500" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017 EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:DQ446226 EMBL:AB493431
IPI:IPI00533670 RefSeq:NP_171944.2 UniGene:At.42446
EnsemblPlants:AT1G04500.1 GeneID:839510 KEGG:ath:AT1G04500
TAIR:At1g04500 HOGENOM:HOG000239716 InParanoid:Q1PFY7 OMA:SPSCSFL
PhylomeDB:Q1PFY7 ProtClustDB:CLSN2680683 Genevestigator:Q1PFY7
Uniprot:Q1PFY7
Length = 386
Score = 124 (48.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 548 NRIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANENTS 607
N++ K R+ + +Y +K+ ER F KK++Y RK LA+ RPR+RG+F + +
Sbjct: 278 NKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGEPN 337
Query: 608 REPECS 613
R+ CS
Sbjct: 338 RQA-CS 342
Score = 51 (23.0 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 337 EIIKKGSDCGIQSHSNGDPLNQSSNGGSNNMDMGSTTNNA 376
E+ + CG ++N + SN GSN D +NA
Sbjct: 43 EVTSASNGCGYVENNNTNNFPDKSNSGSNQ-DHEDNNDNA 81
>TAIR|locus:2028421 [details] [associations]
symbol:BBX17 "B-box domain protein 17" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GO:GO:0008270 GO:GO:0003700 GO:GO:0005622 IPI:IPI00544498
RefSeq:NP_175339.2 UniGene:At.38297 EnsemblPlants:AT1G49130.1
GeneID:841336 KEGG:ath:AT1G49130 OMA:VATKHER Uniprot:F4I1N0
Length = 326
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 24/51 (47%), Positives = 38/51 (74%)
Query: 551 DKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQT 601
+K ++REA V +YR K+ R F KK+RY+ RK A++RPR++G+FVR++
Sbjct: 271 EKRVRSEREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRRS 321
>TAIR|locus:2074587 [details] [associations]
symbol:COL2 "CONSTANS-like 2" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009909
"regulation of flower development" evidence=IMP] [GO:0009658
"chloroplast organization" evidence=IMP] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 GO:GO:0005634 EMBL:AC021640
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0003677
EMBL:AC068900 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009658 GO:GO:0009909 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:L81120 EMBL:L81119 EMBL:AF370149
EMBL:AY059092 EMBL:AY088779 IPI:IPI00518847 RefSeq:NP_186887.1
UniGene:At.10373 IntAct:Q96502 STRING:Q96502
EnsemblPlants:AT3G02380.1 GeneID:821298 KEGG:ath:AT3G02380
TAIR:At3g02380 eggNOG:NOG281690 InParanoid:Q96502 OMA:RVCEACE
PhylomeDB:Q96502 Genevestigator:Q96502 GermOnline:AT3G02380
Uniprot:Q96502
Length = 347
Score = 129 (50.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 557 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANENTSRE 609
+REA V +YR+KK R F K +RY SRK AE RPRI+G+F ++ E + E
Sbjct: 277 EREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIETEAEAEE 329
Score = 42 (19.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 425 ASSVLV-HPRSTQEQLTQ 441
AS + V HPR+T+E + Q
Sbjct: 244 ASDITVQHPRTTKETIDQ 261
>TAIR|locus:2195518 [details] [associations]
symbol:AT1G63820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002684 GenomeReviews:CT485782_GR
HOGENOM:HOG000090374 ProtClustDB:CLSN2681537 EMBL:AK176159
IPI:IPI00542615 RefSeq:NP_176567.2 UniGene:At.50956
EnsemblPlants:AT1G63820.1 GeneID:842685 KEGG:ath:AT1G63820
TAIR:At1g63820 eggNOG:NOG240378 InParanoid:Q67ZF8 OMA:TQRNFTK
PhylomeDB:Q67ZF8 ArrayExpress:Q67ZF8 Genevestigator:Q67ZF8
Uniprot:Q67ZF8
Length = 293
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 549 RIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANENTSR 608
R+ + +R+ ++KYR K+T+R F K ++Y RK LA+ RPR+RG+F R N+
Sbjct: 183 RVGRYSSEERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFAR---NDEVFE 239
Query: 609 EPE 611
P+
Sbjct: 240 NPK 242
>TAIR|locus:2201277 [details] [associations]
symbol:BBX14 "B-box domain protein 14" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA;TAS] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0009867 "jasmonic acid
mediated signaling pathway" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010310 "regulation of hydrogen
peroxide metabolic process" evidence=RCA] [GO:0010363 "regulation
of plant-type hypersensitive response" evidence=RCA] [GO:0030154
"cell differentiation" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003700 HOGENOM:HOG000240360 ProtClustDB:CLSN2689085
EMBL:AC011915 EMBL:AY054625 EMBL:AY081541 EMBL:AY084427
IPI:IPI00518479 PIR:D96709 RefSeq:NP_564932.1 UniGene:At.23999
UniGene:At.69467 UniGene:At.74856 IntAct:Q8LG76 STRING:Q8LG76
PRIDE:Q8LG76 EnsemblPlants:AT1G68520.1 GeneID:843181
KEGG:ath:AT1G68520 TAIR:At1g68520 eggNOG:NOG257442
InParanoid:Q8LG76 OMA:AFLCHAC PhylomeDB:Q8LG76
Genevestigator:Q8LG76 GermOnline:AT1G68520 Uniprot:Q8LG76
Length = 406
Score = 130 (50.8 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 23/45 (51%), Positives = 37/45 (82%)
Query: 558 REAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTA 602
REA V++YR+K+ R F KK+RY+ RK AE+RPR++G+FV++++
Sbjct: 357 REARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRSS 401
>TAIR|locus:2031180 [details] [associations]
symbol:BBX15 "B-box domain protein 15" species:3702
"Arabidopsis thaliana" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016020 "membrane" evidence=IDA] InterPro:IPR000315
InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203 PROSITE:PS50119
PROSITE:PS51017 SMART:SM00336 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281 GO:GO:0016020
GO:GO:0046872 GO:GO:0008270 GO:GO:0003700 EMBL:AY093174
IPI:IPI00533844 PIR:E86384 RefSeq:NP_173915.2 UniGene:At.27494
EnsemblPlants:AT1G25440.1 GeneID:839130 KEGG:ath:AT1G25440
TAIR:At1g25440 eggNOG:NOG293508 HOGENOM:HOG000240360
InParanoid:Q8RWD0 OMA:SDEISHE PhylomeDB:Q8RWD0
ProtClustDB:CLSN2689085 Genevestigator:Q8RWD0 Uniprot:Q8RWD0
Length = 417
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 555 FAD--REAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTA 602
F D REA V++YR+K+ R F KK+RY+ RK AE+RPR++G+FV++ +
Sbjct: 356 FGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRAS 405
>TAIR|locus:2143221 [details] [associations]
symbol:COL1 "CONSTANS-like 1" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IMP] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 GO:GO:0009909
EMBL:AL391144 EMBL:Y10555 EMBL:Y10556 EMBL:AY074369 EMBL:BT002363
IPI:IPI00520338 PIR:T51414 RefSeq:NP_197089.1 UniGene:At.24486
UniGene:At.48027 IntAct:O50055 STRING:O50055
EnsemblPlants:AT5G15850.1 GeneID:831442 KEGG:ath:AT5G15850
TAIR:At5g15850 eggNOG:NOG314154 HOGENOM:HOG000238833
InParanoid:O50055 OMA:QSCERAP PhylomeDB:O50055
ProtClustDB:CLSN2685199 Genevestigator:O50055 GermOnline:AT5G15850
Uniprot:O50055
Length = 355
Score = 132 (51.5 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 25/44 (56%), Positives = 33/44 (75%)
Query: 557 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 600
DREA V +YR+KK R F K +RY SRK AE+RPRI+G+F ++
Sbjct: 285 DREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKK 328
Score = 37 (18.1 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 67 NSGNNTGSND 76
NSG N+G+N+
Sbjct: 146 NSGKNSGNNN 155
>TAIR|locus:2168083 [details] [associations]
symbol:AT5G59990 "AT5G59990" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB015475 EMBL:AY924872
IPI:IPI00537727 RefSeq:NP_200807.1 UniGene:At.55631
EnsemblPlants:AT5G59990.1 GeneID:836121 KEGG:ath:AT5G59990
TAIR:At5g59990 HOGENOM:HOG000064609 InParanoid:Q9FJD8 OMA:RESSTVW
PhylomeDB:Q9FJD8 ProtClustDB:CLSN2686501 ArrayExpress:Q9FJD8
Genevestigator:Q9FJD8 Uniprot:Q9FJD8
Length = 241
Score = 119 (46.9 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 557 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQTANENTSREPE 611
+++ + KYR K+ R F K+++Y+ RK LA+ RPRIRG+F R N+ S++ +
Sbjct: 162 EKKEKIEKYRSKRNLRNFNKRIKYECRKTLADSRPRIRGRFAR---NDEISQQEQ 213
Score = 43 (20.2 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 13/49 (26%), Positives = 21/49 (42%)
Query: 329 ASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNNMDMGSTTNNAF 377
A++ V+ G + G S S P + S G S M +++N F
Sbjct: 55 AAEAVSGFGYFDSGMNGGGGSSSCDSPSSMGSGGESLVMQRSVSSHNGF 103
>TAIR|locus:2145698 [details] [associations]
symbol:AT5G14370 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR010402 Pfam:PF06203
PROSITE:PS51017 EMBL:CP002688 EMBL:AY050892 EMBL:AY091296
IPI:IPI00522642 RefSeq:NP_568300.1 UniGene:At.5173
EnsemblPlants:AT5G14370.1 GeneID:831288 KEGG:ath:AT5G14370
TAIR:At5g14370 HOGENOM:HOG000151170 InParanoid:Q949T9 OMA:WVSYSEV
PhylomeDB:Q949T9 ProtClustDB:CLSN2689669 ArrayExpress:Q949T9
Genevestigator:Q949T9 Uniprot:Q949T9
Length = 339
Score = 125 (49.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 21/43 (48%), Positives = 35/43 (81%)
Query: 558 REAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 600
REA++ +Y++K+ R F K++RYQ RK AE+RPR++G+FV++
Sbjct: 294 REASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKR 336
Score = 37 (18.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 15/64 (23%), Positives = 26/64 (40%)
Query: 329 ASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNNMDMGSTTNNAFIKPAGLKNKSE 388
AS VV + + S I+ N + + S+N+D KP L K E
Sbjct: 6 ASPVVGEEKQSTRSSK-RIKKRKNREATTTMEDKSSSNLDASRKIRTKTKKPKFLSLKLE 64
Query: 389 VSST 392
++++
Sbjct: 65 LNTS 68
>TAIR|locus:2177911 [details] [associations]
symbol:AT5G41380 "AT5G41380" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AY800647 EMBL:AY924846
IPI:IPI00519705 RefSeq:NP_198954.2 UniGene:At.51252
EnsemblPlants:AT5G41380.1 GeneID:834140 KEGG:ath:AT5G41380
TAIR:At5g41380 HOGENOM:HOG000090374 InParanoid:Q5Q0A4 OMA:VVEIPNI
PhylomeDB:Q5Q0A4 ProtClustDB:CLSN2681537 Genevestigator:Q5Q0A4
Uniprot:Q5Q0A4
Length = 307
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00022
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 549 RIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVR 599
++ + +R+ ++KYR K+ +R F K ++Y RK LA+ RPRIRG+F R
Sbjct: 206 KVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFAR 256
>TAIR|locus:2143206 [details] [associations]
symbol:CO "CONSTANS" species:3702 "Arabidopsis thaliana"
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007623 "circadian
rhythm" evidence=IGI] [GO:0009909 "regulation of flower
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010018 "far-red light signaling pathway"
evidence=IMP] [GO:0010218 "response to far red light" evidence=IMP]
[GO:0006281 "DNA repair" evidence=RCA] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=RCA] [GO:0048608
"reproductive structure development" evidence=RCA]
InterPro:IPR000315 InterPro:IPR010402 Pfam:PF00643 Pfam:PF06203
PROSITE:PS50119 PROSITE:PS51017 SMART:SM00336 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030154 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
GO:GO:0009908 GO:GO:0009909 EMBL:AL391144 HOGENOM:HOG000238833
ProtClustDB:CLSN2685199 EMBL:X94937 EMBL:BT001926 EMBL:AY086574
IPI:IPI00535908 IPI:IPI00657421 PIR:A56133 RefSeq:NP_001031887.1
RefSeq:NP_197088.1 UniGene:At.18 IntAct:Q39057 MINT:MINT-6608985
STRING:Q39057 EnsemblPlants:AT5G15840.1 GeneID:831441
KEGG:ath:AT5G15840 TAIR:At5g15840 eggNOG:NOG306777
InParanoid:Q39057 KO:K12135 OMA:CHADSAY PhylomeDB:Q39057
Genevestigator:Q39057 GO:GO:0010018 Uniprot:Q39057
Length = 373
Score = 123 (48.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 557 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVRQ 600
DREA V +YR+K+ R F K +RY SRK AE RPR+ G+F ++
Sbjct: 305 DREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKR 348
Score = 39 (18.8 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 341 KGSDCGIQSHSNGDPLNQSSNGGSNNMDMGSTTNNAFI 378
+G C Q + + + S+G N D GS +NA+I
Sbjct: 222 RGHQCHNQQNFQFN-IKYGSSGTHYN-DNGSINHNAYI 257
>TAIR|locus:2132902 [details] [associations]
symbol:AT4G27900 "AT4G27900" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002687 EMBL:AL161572 EMBL:AL035524 EMBL:AY062469
EMBL:AY093297 IPI:IPI00527124 PIR:T02891 RefSeq:NP_194519.1
RefSeq:NP_849461.1 UniGene:At.26998 IntAct:Q9SUE8 PRIDE:Q9SUE8
EnsemblPlants:AT4G27900.1 EnsemblPlants:AT4G27900.2 GeneID:828903
KEGG:ath:AT4G27900 TAIR:At4g27900 HOGENOM:HOG000241629
InParanoid:Q9SUE8 OMA:ISCTSED PhylomeDB:Q9SUE8
ProtClustDB:CLSN2685530 Genevestigator:Q9SUE8 Uniprot:Q9SUE8
Length = 261
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 557 DREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVR 599
DR +++YR KK++R F +K++Y RK LA+ +PRIRG+F +
Sbjct: 213 DRREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAK 255
>TAIR|locus:2051099 [details] [associations]
symbol:AT2G33350 "AT2G33350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR010402 Pfam:PF06203 PROSITE:PS51017
EMBL:CP002685 ProtClustDB:CLSN2680683 EMBL:AY600556 IPI:IPI00520380
RefSeq:NP_180893.2 UniGene:At.50819 EnsemblPlants:AT2G33350.1
GeneID:817898 KEGG:ath:AT2G33350 TAIR:At2g33350 InParanoid:Q6E267
OMA:GSEINKP PhylomeDB:Q6E267 Genevestigator:Q6E267 Uniprot:Q6E267
Length = 410
Score = 121 (47.7 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 548 NRIDKNKFADREAAVTKYRQKKTERCFRKKVRYQSRKRLAEQRPRIRGQFVR 599
N++ K R+ + +Y +K+ ER F KK++Y RK LA+ RPR+RG+F +
Sbjct: 301 NKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK 352
Score = 40 (19.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 329 ASQVVNSLEIIKKGSDCGIQSHSNGDPLNQSSNGGSNN 366
+S+V ++ I++K HSN + + N +NN
Sbjct: 43 SSEVTSTSNILEKSGSF----HSNTNTTTTTENSNNNN 76
Score = 39 (18.8 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 11/21 (52%), Positives = 12/21 (57%)
Query: 387 SEVSSTVNCLHSS-SFQPTKN 406
SEV+ST N L S SF N
Sbjct: 44 SEVTSTSNILEKSGSFHSNTN 64
>CGD|CAL0003874 [details] [associations]
symbol:PGA55 species:5476 "Candida albicans" [GO:0009986
"cell surface" evidence=ISS] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
CGD:CAL0003874 GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1
GeneID:3645784 KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 125 (49.1 bits), Expect = 0.00054, P = 0.00054
Identities = 66/386 (17%), Positives = 157/386 (40%)
Query: 56 TQKSIKSKNVENSGNNTGSNDEXXXXXXXXXXXXXXXXXXXTQSSWTKKAV----EVDSP 111
+ + S + +S + S+ E ++ S + + V EV S
Sbjct: 351 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSS 410
Query: 112 RHMSPSDQLAECPDSTCAQVIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDV 171
+S S +++ + + + + S++++ S V V+++ E E + ++ S +V
Sbjct: 411 SEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEV-VSSSSEVSSSSEVVSSSSEVSSSSEV 469
Query: 172 GGQRSLDLQLEYQTESPIKLVGTKKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEA 231
+ + + S I ++ ++ S SE ++ +S SS + +
Sbjct: 470 SSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS 529
Query: 232 AKLAGAITKIIDSDK-EDTEYEASNKPSKILDINSKSIKDSXXXXXXXXXXXXXXGVKDI 290
+ + +++I S + + E S+ S+++ +S + S V
Sbjct: 530 SSEVSSSSQVISSSEIVSSSSEVSSSSSEVVS-SSSEVSSSSEVVSSSSEVSSSSEVSS- 587
Query: 291 GTTIQDDRNVLRRSDSSAFSRYNTASNVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSH 350
+ + V+ S+ + S +S+ + S+S+V +S E+ S + S
Sbjct: 588 SSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEV---SSSSEVSSS 644
Query: 351 SNGDPLNQSSNGGSNNMDMGSTTNNAFIKPAGLKNKSEVSSTVNCLHSSSFQPTKNDLLC 410
S + SS S++ ++ S+++ + + + SEV S+ + + SSS + + + +
Sbjct: 645 SQ---VTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSS-EVSSSSEVS 700
Query: 411 SPRQVLLDKRDDLVASSVLVHPRSTQ 436
S QV+ ++V+SS V S++
Sbjct: 701 SSSQVI--SSSEVVSSSSEVVSSSSE 724
>UNIPROTKB|Q59SG9 [details] [associations]
symbol:PGA55 "Flocculin-like protein" species:237561
"Candida albicans SC5314" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0009986 "cell surface" evidence=ISS] CGD:CAL0003874
GO:GO:0009986 EMBL:AACQ01000152 RefSeq:XP_712591.1 GeneID:3645784
KEGG:cal:CaO19.207 Uniprot:Q59SG9
Length = 1404
Score = 125 (49.1 bits), Expect = 0.00054, P = 0.00054
Identities = 66/386 (17%), Positives = 157/386 (40%)
Query: 56 TQKSIKSKNVENSGNNTGSNDEXXXXXXXXXXXXXXXXXXXTQSSWTKKAV----EVDSP 111
+ + S + +S + S+ E ++ S + + V EV S
Sbjct: 351 SSSEVSSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSS 410
Query: 112 RHMSPSDQLAECPDSTCAQVIHSNAEITGSRRVPVTAAKECQDHEERCENFAKRSRDLDV 171
+S S +++ + + + + S++++ S V V+++ E E + ++ S +V
Sbjct: 411 SEVSSSSEVSSSSEVSSSSEVSSSSQVISSSEV-VSSSSEVSSSSEVVSSSSEVSSSSEV 469
Query: 172 GGQRSLDLQLEYQTESPIKLVGTKKTNRLDLGSSKLSEQIDRGQLDLNSESPSSKLKYEA 231
+ + + S I ++ ++ S SE ++ +S SS + +
Sbjct: 470 SSSSEVSSSSQVTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSSEVSS 529
Query: 232 AKLAGAITKIIDSDK-EDTEYEASNKPSKILDINSKSIKDSXXXXXXXXXXXXXXGVKDI 290
+ + +++I S + + E S+ S+++ +S + S V
Sbjct: 530 SSEVSSSSQVISSSEIVSSSSEVSSSSSEVVS-SSSEVSSSSEVVSSSSEVSSSSEVSS- 587
Query: 291 GTTIQDDRNVLRRSDSSAFSRYNTASNVNKGPGGNIESASQVVNSLEIIKKGSDCGIQSH 350
+ + V+ S+ + S +S+ + S+S+V +S E+ S + S
Sbjct: 588 SSEVSSSSQVISSSEVVSSSSEVVSSSSEVSSSSEVSSSSEVSSSSEV---SSSSEVSSS 644
Query: 351 SNGDPLNQSSNGGSNNMDMGSTTNNAFIKPAGLKNKSEVSSTVNCLHSSSFQPTKNDLLC 410
S + SS S++ ++ S+++ + + + SEV S+ + + SSS + + + +
Sbjct: 645 SQ---VTSSSEIVSSSSEVSSSSSEVVSSSSEVSSSSEVVSSSSEVSSSS-EVSSSSEVS 700
Query: 411 SPRQVLLDKRDDLVASSVLVHPRSTQ 436
S QV+ ++V+SS V S++
Sbjct: 701 SSSQVI--SSSEVVSSSSEVVSSSSE 724
>TAIR|locus:2141020 [details] [associations]
symbol:APRR2 species:3702 "Arabidopsis thaliana"
[GO:0000156 "phosphorelay response regulator activity"
evidence=IEA;ISS] [GO:0000160 "phosphorelay signal transduction
system" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=RCA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009736 "cytokinin mediated signaling pathway" evidence=RCA]
InterPro:IPR001005 InterPro:IPR001789 InterPro:IPR009057
Pfam:PF00072 Pfam:PF00249 PROSITE:PS50110 SMART:SM00448
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0035556
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
EMBL:AL161547 Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AL021889
GO:GO:0000156 InterPro:IPR011006 SUPFAM:SSF52172 InterPro:IPR017930
InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB041531
EMBL:AF385725 EMBL:AY143963 IPI:IPI00524902 IPI:IPI00542892
PIR:T05088 RefSeq:NP_001078405.1 RefSeq:NP_001154250.1
RefSeq:NP_001190759.1 RefSeq:NP_567548.1 RefSeq:NP_849403.1
RefSeq:NP_849404.2 UniGene:At.25394 ProteinModelPortal:Q6LA43
SMR:Q6LA43 IntAct:Q6LA43 STRING:Q6LA43 EnsemblPlants:AT4G18020.1
EnsemblPlants:AT4G18020.2 EnsemblPlants:AT4G18020.3
EnsemblPlants:AT4G18020.6 GeneID:827527 KEGG:ath:AT4G18020
GeneFarm:4314 TAIR:At4g18020 eggNOG:NOG268152 HOGENOM:HOG000005909
InParanoid:Q6LA43 OMA:TIMISTD PhylomeDB:Q6LA43
ProtClustDB:CLSN2689492 Genevestigator:Q6LA43 GermOnline:AT4G18020
Uniprot:Q6LA43
Length = 535
Score = 97 (39.2 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 12 KCLSKGAVDFLVKPIRKNELKNLWQHV 38
KC++ GAV+FL KP+ +LKN+WQHV
Sbjct: 112 KCIALGAVEFLQKPLSPEKLKNIWQHV 138
Score = 68 (29.0 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 33/161 (20%), Positives = 61/161 (37%)
Query: 166 SRDLDVGGQRSLDLQLEYQTESPIKLVGTKKTNRLDLGSSK----LSEQIDRGQLDLNSE 221
SR LD Q +++ +E S K + D+G SK + ++D ++ + E
Sbjct: 189 SRLLDGDCQENINFSMENVNSSTEK---DNMEDHQDIGESKSVDTTNRKLDDDKVVVKEE 245
Query: 222 SPSSKLKYEA--AKLAGAITKIIDSDKEDTEYEASNKPSKILDINSKSIKDSXXXXXXXX 279
S+ + E L T +D K++ E + NK S I +++
Sbjct: 246 RGDSEKEEEGETGDLISEKTDSVDIHKKEDETKPINKSSGIKNVSGNKTSRKKVDWTPEL 305
Query: 280 XXXXXXGVKDIGTTIQDDRNVLRRSDSSAFSRYNTASNVNK 320
V+ +G +L +R+N AS++ K
Sbjct: 306 HKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQK 346
>TAIR|locus:2093668 [details] [associations]
symbol:RR1 "response regulator 1" species:3702
"Arabidopsis thaliana" [GO:0000156 "phosphorelay response regulator
activity" evidence=IEA;ISS] [GO:0000160 "phosphorelay signal
transduction system" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0009736 "cytokinin mediated signaling pathway"
evidence=IGI;RCA;TAS] [GO:0009735 "response to cytokinin stimulus"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010380 "regulation of chlorophyll biosynthetic process"
evidence=IGI] [GO:0031537 "regulation of anthocyanin metabolic
process" evidence=IGI;RCA] [GO:0048367 "shoot system development"
evidence=IGI] [GO:0080022 "primary root development" evidence=IGI]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0010029
"regulation of seed germination" evidence=RCA] [GO:0010043
"response to zinc ion" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] [GO:0048831 "regulation of
shoot system development" evidence=RCA] InterPro:IPR001005
InterPro:IPR001789 InterPro:IPR009057 Pfam:PF00072 Pfam:PF00249
PROSITE:PS50110 SMART:SM00448 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0003682 GO:GO:0010380 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 GO:GO:0080022 GO:GO:0000156 InterPro:IPR011006
SUPFAM:SSF52172 GO:GO:0048367 InterPro:IPR017930 InterPro:IPR006447
TIGRFAMs:TIGR01557 PROSITE:PS51294 KO:K14491 eggNOG:COG0745
GO:GO:0031537 InterPro:IPR017053 PIRSF:PIRSF036392 EMBL:AB016471
EMBL:AP001308 EMBL:AB028608 EMBL:AY056099 EMBL:AK316883
IPI:IPI00534841 IPI:IPI00547650 PIR:T51246 RefSeq:NP_566561.2
RefSeq:NP_850600.2 UniGene:At.183 UniGene:At.48672
ProteinModelPortal:Q940D0 SMR:Q940D0 IntAct:Q940D0 STRING:Q940D0
PaxDb:Q940D0 PRIDE:Q940D0 EnsemblPlants:AT3G16857.2 GeneID:820940
KEGG:ath:AT3G16857 GeneFarm:3920 TAIR:At3g16857
HOGENOM:HOG000034078 InParanoid:Q940D0 OMA:RTCLYEV PhylomeDB:Q940D0
ProtClustDB:CLSN2680844 Genevestigator:Q940D0 GermOnline:AT3G16857
Uniprot:Q940D0
Length = 690
Score = 120 (47.3 bits), Expect = 0.00080, P = 0.00080
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 1 MSSLDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRR 41
MS+ DS +V K ++ GAVD+L+KP+R LKN+WQHV R+
Sbjct: 115 MSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQHVVRK 155
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.125 0.353 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 613 520 0.00089 119 3 11 23 0.49 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 618 (66 KB)
Total size of DFA: 292 KB (2151 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 50.84u 0.17s 51.01t Elapsed: 00:00:03
Total cpu time: 50.84u 0.17s 51.01t Elapsed: 00:00:03
Start: Tue May 21 09:46:36 2013 End: Tue May 21 09:46:39 2013