BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007208
(613 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O43078|ALF1_SCHPO ATPase-like fidgetin OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=alf1 PE=1 SV=1
Length = 660
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 503 PDNEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRG 562
P ++FE I E+I SN V ++DI L++ K SL+E V+ P RP+LF+ GL +P +G
Sbjct: 357 PSSDFEYAIMNEII-SNHEPVYWSDIAGLDDAKNSLKEAVIYPFLRPELFQ-GLREPVQG 414
Query: 563 ILLFGPPGLGK 573
+LLFGPPG GK
Sbjct: 415 MLLFGPPGTGK 425
>sp|Q9P3U2|YKX4_SCHPO Uncharacterized AAA domain-containing protein C328.04
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC328.04 PE=3 SV=1
Length = 741
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 504 DNEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGI 563
D E K I E++ S + V + DI LE K SL+E V+ P RPDLF+ GL +P RG+
Sbjct: 438 DEELGKSILREIVVSGD-EVHWDDISGLEFAKHSLKEAVVYPFLRPDLFQ-GLREPARGM 495
Query: 564 LLFGPPGLGKQCWPR 578
LLFGPPG GK R
Sbjct: 496 LLFGPPGTGKTMLAR 510
>sp|Q9P7J5|YJNA_SCHPO Uncharacterized AAA domain-containing protein C24B10.10c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC24B10.10c PE=3 SV=1
Length = 355
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 57/89 (64%), Gaps = 3/89 (3%)
Query: 505 NEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLF--KGGLLKPCRG 562
NE+E+ + +++ +EI V+F DIG ++E L + V+ PL+ P++F GGLL +G
Sbjct: 68 NEYEQIVASQLVLPSEIDVSFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKG 127
Query: 563 ILLFGPPGLGKQCWPRPLPKRLGQASLMS 591
+LL+GPPG GK + L K+ QA+ ++
Sbjct: 128 LLLYGPPGCGKTMLAKALAKQ-SQATFIN 155
>sp|Q9QYY8|SPAST_MOUSE Spastin OS=Mus musculus GN=Spast PE=2 SV=3
Length = 614
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 459 GPKPAAGTEIMKPESTSEAEKSAAAPNKDGDSSVPAAA--KAPEVPP----DNEFEKRIR 512
GP PAA T P+ PN+ S P A K ++ D+ I
Sbjct: 279 GPGPAATTHKGTPK-----------PNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIM 327
Query: 513 PEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLG 572
E++ N +V F DI E K++LQE+V+LP RP+LF GL P RG+LLFGPPG G
Sbjct: 328 NEIV-DNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFT-GLRAPARGLLLFGPPGNG 385
Query: 573 K 573
K
Sbjct: 386 K 386
>sp|P39955|SAP1_YEAST Protein SAP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SAP1 PE=1 SV=1
Length = 897
Score = 66.2 bits (160), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 504 DNEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGI 563
D + K+I E++ + V + DI LE K SL+E V+ P RPDLF+ GL +P RG+
Sbjct: 584 DRQAAKQIFAEIVVHGD-EVHWDDIAGLESAKYSLKEAVVYPFLRPDLFR-GLREPVRGM 641
Query: 564 LLFGPPGLGKQCWPR 578
LLFGPPG GK R
Sbjct: 642 LLFGPPGTGKTMLAR 656
>sp|A2VDN5|SPAST_BOVIN Spastin OS=Bos taurus GN=SPAST PE=2 SV=1
Length = 614
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 471 PESTSEAEKSAAAPNKDGDSSVP--AAAKAPEVPP----DNEFEKRIRPEVIPSNEISVT 524
P S + KS N+ S P AA K ++ D+ I E++ N +V
Sbjct: 280 PGSAAATHKSTPKTNRTNKPSTPTTAARKKKDLKNFRNVDSNLANLIMNEIV-DNGTAVK 338
Query: 525 FADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
F DI E K++LQE+V+LP RP+LF GL P RG+LLFGPPG GK
Sbjct: 339 FDDIAGQELAKQALQEIVILPSLRPELFT-GLRAPARGLLLFGPPGNGK 386
>sp|Q6NH92|ARC_CORDI AAA ATPase forming ring-shaped complexes OS=Corynebacterium
diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype
gravis) GN=arc PE=3 SV=1
Length = 509
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 514 EVIPSNEIS---------VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGIL 564
EVIP E+S VT+ADIG L E + + V LP +PDL++ LKP +G+L
Sbjct: 171 EVIPKTEVSTLALEEVPDVTYADIGGLNSQIELIHDAVELPFTQPDLYRAYDLKPPKGVL 230
Query: 565 LFGPPGLGKQCWPRPLPKRLGQ 586
L+GPPG GK + + L Q
Sbjct: 231 LYGPPGCGKTLIAKAVANSLAQ 252
>sp|B2RYN7|SPAST_RAT Spastin OS=Rattus norvegicus GN=Spast PE=2 SV=1
Length = 581
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 64/121 (52%), Gaps = 15/121 (12%)
Query: 459 GPKPAAGTEIMKPESTSEAEKSAAAPNKDGDSSVPAAA--KAPEVPP----DNEFEKRIR 512
G +P +G P +T+ K + PN+ S P A K ++ D+ I
Sbjct: 242 GARPGSG-----PAATTH--KGTSKPNRTNKPSTPTTAVRKKKDLKNFRNVDSNLANLIM 294
Query: 513 PEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLG 572
E++ N +V F DI E K++LQE+V+LP RP+LF GL P RG+LLFGPPG G
Sbjct: 295 NEIV-DNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFT-GLRAPARGLLLFGPPGNG 352
Query: 573 K 573
K
Sbjct: 353 K 353
>sp|P40328|TBP6_YEAST Probable 26S protease subunit YTA6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YTA6 PE=1 SV=2
Length = 754
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/60 (56%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
Query: 519 NEISVT-----FADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
NEI VT + DI L K SL+E V+ P RPDLFK GL +P RG+LLFGPPG GK
Sbjct: 459 NEILVTDEKVYWEDIAGLRNAKNSLKEAVVYPFLRPDLFK-GLREPVRGMLLFGPPGTGK 517
>sp|A4IHT0|FIGL1_XENTR Fidgetin-like protein 1 OS=Xenopus tropicalis GN=fignl1 PE=2 SV=1
Length = 656
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 93/193 (48%), Gaps = 28/193 (14%)
Query: 399 SYHLMNNEDTDYRNGKLIISSKSLSHGLSIFQEGKASGKDTLKLEAQAEKSNE------- 451
+Y + NE +D + L+ + L++ + + G + K+ L ++ Q + SN+
Sbjct: 247 AYSALGNESSDIKPNPLV--QRQLTNKEATCESGFKTAKEQLWVDQQKKYSNQPQRNPSP 304
Query: 452 --GGRKEAKGPKPAAGT--EIMKPESTSEAEKSAAAPNKDGDSSVPAAAKAPEVPPDNEF 507
GG K++ G + G + + P E + D + V + P +E
Sbjct: 305 LYGGAKKSLGAARSRGLHGKFVPPVPRQEDVQ-------DSNRKVYGQGNSEMNAPSDER 357
Query: 508 EKRIRPEVIP--SNEI-----SVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPC 560
K I P++I +EI + + DI LE K +++E+V+ P+ RPD+F G L P
Sbjct: 358 LKNIEPKMIELIMSEIMDHGPPLNWDDIAGLEFAKTTIKEIVVWPMLRPDIFTG-LRGPP 416
Query: 561 RGILLFGPPGLGK 573
+GILLFGPPG GK
Sbjct: 417 KGILLFGPPGTGK 429
>sp|Q719N1|SPAST_PIG Spastin (Fragment) OS=Sus scrofa GN=SPAST PE=2 SV=2
Length = 613
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 471 PESTSEAEKSAAAPNKDGDSSVPAAA--KAPEVP----PDNEFEKRIRPEVIPSNEISVT 524
P T+ KS N+ S P A K ++ D+ I E++ N +V
Sbjct: 279 PGPTTATHKSTPKTNRTNKPSTPTTAPRKKKDLKNFRNVDSNLANFIMNEIV-DNGTAVK 337
Query: 525 FADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
F DI E K++LQE+V+LP RP+LF GL P RG+LLFGPPG GK
Sbjct: 338 FDDIAGQELAKQALQEIVILPSLRPELFT-GLRAPARGLLLFGPPGNGK 385
>sp|O75351|VPS4B_HUMAN Vacuolar protein sorting-associated protein 4B OS=Homo sapiens
GN=VPS4B PE=1 SV=2
Length = 444
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 425 GLSIFQEGKASGKDTLKLEAQAEKSNEGGRKEAKGPKPAAGTEIMKPESTSEAEKSAAAP 484
L ++Q +K EAQ +K+ + R AK + E +K E EK A P
Sbjct: 30 ALQLYQHAVQYFLHVVKYEAQGDKAKQSIR--AKCTEYLDRAEKLK-EYLKNKEKKAQKP 86
Query: 485 NKDGDSSVPAAAKAP----EVPPDNEFEKRIRPEV---IPSNEISVTFADIGALEEIKES 537
K+G S PA K E D+ +K+++ ++ I +V ++D+ LE KE+
Sbjct: 87 VKEGQPS-PADEKGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEA 145
Query: 538 LQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
L+E V+LP++ P LF G P RGILLFGPPG GK
Sbjct: 146 LKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGK 180
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
V++ DIG LEE K+ ++E+V P+R P+LF+ + P +GILL+GPPG GK R L
Sbjct: 209 VSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALAN 268
Query: 583 RLG 585
+G
Sbjct: 269 EIG 271
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
V + DIG L+ +K+ L+E V PLR P+LF + P +GILLFGPPG GK
Sbjct: 484 VNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGK 534
>sp|Q9UBP0|SPAST_HUMAN Spastin OS=Homo sapiens GN=SPAST PE=1 SV=1
Length = 616
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 411 RNGKLIISSKSLSHGLSIFQEGKASGKDTLKLEAQAEKSNEGGRKEAKGPKPAAGTEIMK 470
R L +S SL ++ + G A + + + S G K+ GP P K
Sbjct: 235 RKDPLTHTSNSLPRSKTVMKTGSAGLSGHHRAPSYSGLSMVSGVKQGSGPAPTTHKGTPK 294
Query: 471 PESTSEAEKSAAAPNKDGDSSVPAAAKAPEVPPDNEFEKRIRPEVIPSNEISVTFADIGA 530
T++ A K D D+ I E++ N +V F DI
Sbjct: 295 TNRTNKPSTPTTATRKKKDLKNFRNV-------DSNLANLIMNEIV-DNGTAVKFDDIAG 346
Query: 531 LEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
+ K++LQE+V+LP RP+LF GL P RG+LLFGPPG GK
Sbjct: 347 QDLAKQALQEIVILPSLRPELFT-GLRAPARGLLLFGPPGNGK 388
>sp|Q5R658|VPS4B_PONAB Vacuolar protein sorting-associated protein 4B OS=Pongo abelii
GN=VPS4B PE=2 SV=1
Length = 444
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 425 GLSIFQEGKASGKDTLKLEAQAEKSNEGGRKEAKGPKPAAGTEIMKPESTSEAEKSAAAP 484
L ++Q +K EAQ +K+ + R A+ + E +K E EK A P
Sbjct: 30 ALQLYQHAVQYFLHVVKYEAQGDKAKQSIR--AQCTEYLDRAEKLK-EYLKNKEKKAQKP 86
Query: 485 NKDGDSSVPAAAKAP----EVPPDNEFEKRIRPEV---IPSNEISVTFADIGALEEIKES 537
K+G S PA K E D+ +K+++ ++ I +V ++D+ LE KE+
Sbjct: 87 VKEGQPS-PADEKGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKEA 145
Query: 538 LQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
L+E V+LP++ P LF G P RGILLFGPPG GK
Sbjct: 146 LKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGK 180
>sp|Q6AZT2|SPAST_XENLA Spastin OS=Xenopus laevis GN=spast PE=2 SV=1
Length = 600
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 504 DNEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGI 563
D+ I E++ S SV FADI + K++LQE+V+LP RP+LF GL P RG+
Sbjct: 305 DSNLANLILNEIVDSGP-SVKFADIAGQDLAKQALQEIVILPSIRPELFT-GLRAPARGL 362
Query: 564 LLFGPPGLGK 573
LLFGPPG GK
Sbjct: 363 LLFGPPGNGK 372
>sp|Q7ZZ25|ATD1A_DANRE ATPase family AAA domain-containing protein 1-A OS=Danio rerio
GN=atad1a PE=2 SV=2
Length = 380
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 505 NEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGG-LLKPCRGI 563
E+E I ++ I VT+ D+ L+EI +Q+ V+LP ++ LF G LL+P +G+
Sbjct: 73 TEYEMNIATLLVDPRSIKVTWRDVAGLDEIISEMQDTVILPFQKRHLFSGSKLLQPPKGV 132
Query: 564 LLFGPPGLGK 573
LL+GPPG GK
Sbjct: 133 LLYGPPGCGK 142
>sp|P28737|MSP1_YEAST Protein MSP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=MSP1 PE=1 SV=2
Length = 362
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Query: 505 NEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGG-LLKPCRGI 563
+ +E+ I ++ +EI++TF DIG L+ + L E V+ PL P+++ LL+ G+
Sbjct: 70 DAYERTILSSIVTPDEINITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGV 129
Query: 564 LLFGPPGLGKQCWPRPLPKRLG 585
LL+GPPG GK + L K G
Sbjct: 130 LLYGPPGCGKTMLAKALAKESG 151
>sp|Q60QD1|FIGL1_CAEBR Fidgetin-like protein 1 OS=Caenorhabditis briggsae GN=figl-1 PE=3
SV=1
Length = 591
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
+ +AD+ LE K++L+E+V+LP +RPD+F GL P +G+LLFGPPG GK
Sbjct: 313 IGWADVAGLEGAKKALKEIVVLPFQRPDIFT-GLRAPPKGVLLFGPPGTGK 362
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 522 SVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLP 581
+ T+ DIG LE +K+ LQELV P+ PD F ++P RG+L +GPPG GK + +
Sbjct: 470 NTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 529
Query: 582 KRLGQASLMSPCLPSL 597
QA+ +S P L
Sbjct: 530 NEC-QANFISVKGPEL 544
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 522 SVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLP 581
+V + DIG + ++E+V LPLR P LFK +KP RGIL++GPPG GK R +
Sbjct: 197 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVA 256
Query: 582 KRLG 585
G
Sbjct: 257 NETG 260
>sp|Q9VQN8|FIGL1_DROME Fidgetin-like protein 1 OS=Drosophila melanogaster GN=CG3326 PE=2
SV=2
Length = 523
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
V + DI LE K + E +++PLRRPDLF G P RG+LLFGPPG GK
Sbjct: 247 VAWEDIAGLESAKSTFLEAIIMPLRRPDLFTGVRCPP-RGVLLFGPPGTGK 296
>sp|O16299|FIGL1_CAEEL Fidgetin-like protein 1 OS=Caenorhabditis elegans GN=figl-1 PE=1
SV=1
Length = 594
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%), Gaps = 3/56 (5%)
Query: 518 SNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
+NEI +AD+ LE K++L+E+V+LP +RPD+F G+ P +G+LLFGPPG GK
Sbjct: 310 NNEIG--WADVAGLEGAKKALREIVVLPFKRPDVFT-GIRAPPKGVLLFGPPGTGK 362
>sp|Q6NW58|SPAST_DANRE Spastin OS=Danio rerio GN=spast PE=2 SV=2
Length = 570
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 504 DNEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGI 563
D++ I E++ S + V F DI + K++LQE+V+LP RP+LF GL P RG+
Sbjct: 274 DSKLASLILNEIVDSGSV-VRFDDIAGQDLAKQALQEIVILPALRPELFT-GLRAPARGL 331
Query: 564 LLFGPPGLGK 573
LLFGPPG GK
Sbjct: 332 LLFGPPGNGK 341
>sp|Q05AS3|SPAST_XENTR Spastin OS=Xenopus tropicalis GN=spast PE=2 SV=1
Length = 603
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 522 SVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
+V FADI + K++LQE+V+LP RP+LF GL P RG+LLFGPPG GK
Sbjct: 325 TVKFADIAGQDLAKQALQEIVILPSIRPELFT-GLRAPARGLLLFGPPGNGK 375
>sp|Q5RII9|KTNA1_DANRE Katanin p60 ATPase-containing subunit A1 OS=Danio rerio GN=katna1
PE=2 SV=1
Length = 485
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 452 GGRKEAKGPKPAAGTEIMKPESTSEAEKSAAAPNKDGDSSVPAAAKAPEVP------PDN 505
G R +A+ A + KP+ + E +++ + P +D + A A EV D
Sbjct: 128 GPRGQARPSPRVANGDKGKPQKSKEKKENPSKPKEDKNK---AEAVETEVKRFDRGGEDK 184
Query: 506 EFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILL 565
+ + ++I N +VT+ DI LEE K+ L+E V+LP+ P+ FK G+ +P +G+L+
Sbjct: 185 DLIDALERDIISQNP-NVTWDDIADLEEAKKLLKEAVVLPMWMPEFFK-GIRRPWKGVLM 242
Query: 566 FGPPGLGK 573
GPPG GK
Sbjct: 243 VGPPGTGK 250
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 522 SVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
+V + DIG LE K+ L E V PL+ P++F+ +KP RGILLFGPPG GK
Sbjct: 451 NVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGK 502
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 5/62 (8%)
Query: 517 PSNEI-----SVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGL 571
P+ E+ VT+ DIG L+ ++E++ LPL+ P+LF+ ++P +G+LL+GPPG
Sbjct: 168 PAEEVKRAVPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGT 227
Query: 572 GK 573
GK
Sbjct: 228 GK 229
>sp|Q9UN37|VPS4A_HUMAN Vacuolar protein sorting-associated protein 4A OS=Homo sapiens
GN=VPS4A PE=1 SV=1
Length = 437
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 419 SKSLSHGLSIFQEGKASGKDTLKLEAQAEKSNEGGRKEAKGPKPAAGTEIMKPESTSEAE 478
+K+ L ++Q +K EA ++K+ E R AK + E +K S+ E
Sbjct: 22 AKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIR--AKCVQYLDRAEKLKDYLRSK-E 78
Query: 479 KSAAAPNKDGDSSVPAAAKAPEVPPDNEFEKRIRPEVIPS---NEISVTFADIGALEEIK 535
K P K+ S + E DN +K+++ +++ + + ++ + D+ LE K
Sbjct: 79 KHGKKPVKENQSEGKGSDSDSE--GDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAK 136
Query: 536 ESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
E+L+E V+LP++ P LF G P RGILLFGPPG GK
Sbjct: 137 EALKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGK 173
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 484 PNKDGDSSVPAAAKAPEVPPDNEFE---KRIRPEVIPSNEI---SVTFADIGALEEIKES 537
P D D +P V +++F+ K I P + + +V + DIG LE++K
Sbjct: 419 PEIDLDKPIPTEILEKMVVTEDDFKNALKSIEPSSLREVMVEVPNVHWDDIGGLEDVKRE 478
Query: 538 LQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
++E V LPL +PD+FK ++P +G LL+GPPG+GK
Sbjct: 479 IKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGK 514
Score = 53.9 bits (128), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 496 AKAP-EVPPDNEFEKRIRPEVIPSNEIS-VTFADIGALEEIKESLQELVMLPLRRPDLFK 553
+K P E+ + + E R P E+S +++ DIG L E ++E++ LPL+ P+LF+
Sbjct: 158 SKVPVEIGEETKIEIREEPASEVLEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFE 217
Query: 554 GGLLKPCRGILLFGPPGLGKQCWPR 578
+ P +G++L+GPPG GK R
Sbjct: 218 RLGITPPKGVILYGPPGTGKTLIAR 242
>sp|B4USW8|KATL1_OTOGA Katanin p60 ATPase-containing subunit A-like 1 OS=Otolemur
garnettii GN=KATNAL1 PE=3 SV=1
Length = 490
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 14/127 (11%)
Query: 457 AKGP----KPAAGTEIMKPESTSEAEKSAAAPNKDGDSSVPAAAKAPEVPP------DNE 506
A+GP P + +E KP ++ + + A + G ++ A E+P D +
Sbjct: 132 ARGPVGRAHPISKSE--KPSTSRDKDNRARGKDDKGRKNMQDGASDGEIPKFDGAGYDKD 189
Query: 507 FEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLF 566
+ + +++ N S+ + DI LEE K+ L+E V+LP+ PD FK G+ +P +G+L+
Sbjct: 190 LIEALERDIVSRNP-SIHWDDIADLEEAKKLLREAVVLPMWMPDFFK-GIRRPWKGVLMV 247
Query: 567 GPPGLGK 573
GPPG GK
Sbjct: 248 GPPGTGK 254
>sp|Q5ZK92|SPAST_CHICK Spastin OS=Gallus gallus GN=SPAST PE=2 SV=1
Length = 613
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 504 DNEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGI 563
D+ I E++ S +V F DI E K++LQE+V+LP RP+LF GL P RG+
Sbjct: 318 DSNLANLILNEIVDSGP-AVKFDDIAGQELAKQALQEIVILPSLRPELFT-GLRAPARGL 375
Query: 564 LLFGPPGLGK 573
LLFGPPG GK
Sbjct: 376 LLFGPPGNGK 385
>sp|Q793F9|VPS4A_RAT Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus
GN=Vps4a PE=2 SV=1
Length = 437
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 419 SKSLSHGLSIFQEGKASGKDTLKLEAQAEKSNEGGRKEAKGPKPAAGTEIMKPESTSEAE 478
+K+ L ++Q +K EA ++K+ E R AK + E +K + E
Sbjct: 22 AKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIR--AKCMQYLDRAEKLK-DYLRNKE 78
Query: 479 KSAAAPNKDGDSSVPAAAKAPEVPPDNEFEKRIRPEVIPS---NEISVTFADIGALEEIK 535
K P K+ S + E DN +K+++ +++ + + ++ + D+ LE K
Sbjct: 79 KHGKKPVKENQSEGKGSDSDSE--GDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAK 136
Query: 536 ESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
E+L+E V+LP++ P LF G P RGILLFGPPG GK
Sbjct: 137 EALKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGK 173
>sp|Q8VEJ9|VPS4A_MOUSE Vacuolar protein sorting-associated protein 4A OS=Mus musculus
GN=Vps4a PE=1 SV=1
Length = 437
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 419 SKSLSHGLSIFQEGKASGKDTLKLEAQAEKSNEGGRKEAKGPKPAAGTEIMKPESTSEAE 478
+K+ L ++Q +K EA ++K+ E R AK + E +K + E
Sbjct: 22 AKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIR--AKCMQYLDRAEKLK-DYLRNKE 78
Query: 479 KSAAAPNKDGDSSVPAAAKAPEVPPDNEFEKRIRPEVIPS---NEISVTFADIGALEEIK 535
K P K+ S + E DN +K+++ +++ + + ++ + D+ LE K
Sbjct: 79 KHGKKPVKENQSEGKGSDSDSE--GDNPEKKKLQEQLMGAVVMEKPNIRWNDVAGLEGAK 136
Query: 536 ESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
E+L+E V+LP++ P LF G P RGILLFGPPG GK
Sbjct: 137 EALKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGK 173
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
VT+ DIG LE++K LQELV P+ PD F + P +G+L +GPPG GK + +
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 583 RLGQASLMSPCLPSL 597
QA+ +S P L
Sbjct: 534 EC-QANFISIKGPEL 547
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
V + DIG + ++E+V LPLR P LFK +KP RGILL+GPPG GK R +
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 583 RLG 585
G
Sbjct: 261 ETG 263
>sp|Q9SEX2|KTNA1_ARATH Katanin p60 ATPase-containing subunit A1 OS=Arabidopsis thaliana
GN=AAA1 PE=1 SV=1
Length = 523
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 3/125 (2%)
Query: 449 SNEGGRKEAKGPKPAAGTEIMKPESTSEAEKSAAAPNKDGDSSVPAAAKAPEVPPDNEFE 508
++ GGR A K AG A KS A + +GD+ + + PD +
Sbjct: 164 ASRGGRGGATS-KSTAGARSSTAGKKGAASKSNKAESMNGDAEDGKSKRGLYEGPDEDLA 222
Query: 509 KRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGP 568
+ +V+ S V + D+ L E K L+E V+LPL P+ F+G + +P +G+L+FGP
Sbjct: 223 AMLERDVLDSTP-GVRWDDVAGLSEAKRLLEEAVVLPLWMPEYFQG-IRRPWKGVLMFGP 280
Query: 569 PGLGK 573
PG GK
Sbjct: 281 PGTGK 285
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
VT+ DIG LE++K LQELV P+ PD F + P +G+L +GPPG GK + +
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 583 RLGQASLMSPCLPSL 597
QA+ +S P L
Sbjct: 534 EC-QANFISIKGPEL 547
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
V + DIG + ++E+V LPLR P LFK +KP RGILL+GPPG GK R +
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 583 RLG 585
G
Sbjct: 261 ETG 263
>sp|Q0VD48|VPS4B_BOVIN Vacuolar protein sorting-associated protein 4B OS=Bos taurus
GN=VPS4B PE=2 SV=1
Length = 444
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 80/157 (50%), Gaps = 12/157 (7%)
Query: 424 HGLSIFQEGKASGKDTLKLEAQAEKSNEGGRKEAKGPKPAAGTEIMKPESTSEAEKSAAA 483
L ++Q +K EAQ +K+ + R AK + E +K E + EK
Sbjct: 29 EALQLYQHAVQYFLHVVKYEAQGDKAKQSIR--AKCTEYLDRAEKLK-EYLKKREKKPQK 85
Query: 484 PNKDGDSSVPAAAKA----PEVPPDNEFEKRIRPEV---IPSNEISVTFADIGALEEIKE 536
P K+G + PA K E D+ +K+++ ++ I +V ++D+ LE KE
Sbjct: 86 PVKEGQPA-PADEKGNDSDGEGESDDPEKKKLQNQLQGAIVIERPNVKWSDVAGLEGAKE 144
Query: 537 SLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
+L+E V+LP++ P LF G P RGILLFGPPG GK
Sbjct: 145 ALKEAVILPIKFPHLFTGKRT-PWRGILLFGPPGTGK 180
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
VT+ DIG LE++K LQELV P+ PD F + P +G+L +GPPG GK + +
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 583 RLGQASLMSPCLPSL 597
QA+ +S P L
Sbjct: 534 EC-QANFISIKGPEL 547
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
V + DIG + ++E+V LPLR P LFK +KP RGILL+GPPG GK R +
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 583 RLG 585
G
Sbjct: 261 ETG 263
>sp|A1A0U4|ARC_BIFAA AAA ATPase forming ring-shaped complexes OS=Bifidobacterium
adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814
/ E194a) GN=arc PE=3 SV=1
Length = 515
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 16/118 (13%)
Query: 501 VPPDNEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPC 560
VPP+N+ + + E +P VTFADIG L+E E +++ V +P + +LF+ LKP
Sbjct: 177 VPPENDDDLVL--EEVPD----VTFADIGGLDEQIERIRDAVQMPFQHRELFERYDLKPP 230
Query: 561 RGILLFGPPGLGKQCWPRPLPKRL------GQASLMSPCLPSLPNGLV----RMRRMF 608
+G+LL+GPPG GK + + L G +S P L N V R+ RM
Sbjct: 231 KGVLLYGPPGNGKTLIAKAVANALAEGTDAGSGVFLSVKGPELLNKFVGESERLIRMI 288
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
VT+ DIG LE++K LQELV P+ PD F + P +G+L +GPPG GK + +
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 583 RLGQASLMSPCLPSL 597
QA+ +S P L
Sbjct: 534 EC-QANFISIKGPEL 547
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
V + DIG + ++E+V LPLR P LFK +KP RGILL+GPPG GK R +
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 583 RLG 585
G
Sbjct: 261 ETG 263
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
VT+ DIG LE++K LQELV P+ PD F + P +G+L +GPPG GK + +
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 583 RLGQASLMSPCLPSL 597
QA+ +S P L
Sbjct: 534 EC-QANFISIKGPEL 547
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
V + DIG + ++E+V LPLR P LFK +KP RGILL+GPPG GK R +
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 583 RLG 585
G
Sbjct: 261 ETG 263
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
VT+ DIG LE++K LQELV P+ PD F + P +G+L +GPPG GK + +
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 583 RLGQASLMSPCLPSL 597
QA+ +S P L
Sbjct: 534 EC-QANFISIKGPEL 547
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
V + DIG + ++E+V LPLR P LFK +KP RGILL+GPPG GK R +
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 583 RLG 585
G
Sbjct: 261 ETG 263
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
V + DIG + ++ELV LPLR P LFK +KP RGIL++GPPG GK R +
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281
Query: 583 RLG 585
G
Sbjct: 282 ETG 284
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 522 SVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
+V + DIG LEE+K L E V P+ P+ F+ L P RG+L +GPPG GK
Sbjct: 495 NVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGK 546
>sp|P53549|PRS10_YEAST 26S protease subunit RPT4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPT4 PE=1 SV=4
Length = 437
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
+TF IG L E L+E++ LPL+ P++F+ +KP +G+LL+GPPG GK + +
Sbjct: 178 ITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAA 237
Query: 583 RLGQASLMSPC 593
+G + SP
Sbjct: 238 TIGANFIFSPA 248
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 36/63 (57%)
Query: 523 VTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPLPK 582
V + DIG ++ELV LPLR P LFK +KP RGIL++GPPG GK R +
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 583 RLG 585
G
Sbjct: 281 ETG 283
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 522 SVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWPRPL 580
+V + DIG LEE+K L+E V +P+ + F + P +G+L FGPPG GK + +
Sbjct: 493 NVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAI 551
>sp|F6QV99|ATAD1_BOVIN ATPase family AAA domain-containing protein 1 OS=Bos taurus
GN=ATAD1 PE=2 SV=2
Length = 361
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 505 NEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGG-LLKPCRGI 563
+E+E I ++ + VT++DI L+++ L++ V+LP+++ LF+ LL+P +G+
Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGV 129
Query: 564 LLFGPPGLGKQCWPRPLPKRLG 585
LL+GPPG GK + K G
Sbjct: 130 LLYGPPGCGKTLIAKATAKEAG 151
>sp|Q505J9|ATAD1_RAT ATPase family AAA domain-containing protein 1 OS=Rattus norvegicus
GN=Atad1 PE=1 SV=1
Length = 361
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 505 NEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGG-LLKPCRGI 563
+E+E I ++ + VT++DI L+++ L++ V+LP+++ LF+ LL+P +G+
Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGV 129
Query: 564 LLFGPPGLGKQCWPRPLPKRLG 585
LL+GPPG GK + K G
Sbjct: 130 LLYGPPGCGKTLIAKATAKEAG 151
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 2/53 (3%)
Query: 522 SVTFADIGALEEIKESLQELVMLPLRRPDLFKG-GLLKPCRGILLFGPPGLGK 573
+VT+ADIGALE+I+E L ++ P+R PD FK GL+ P G+LL GPPG GK
Sbjct: 577 NVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPA-GVLLAGPPGCGK 628
Score = 37.0 bits (84), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 522 SVTFADIGALE-EIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGK 573
+V F D+G + +KE + L+ + R P+++ + P RG+LL GPPG GK
Sbjct: 261 NVKFEDVGGNDMTLKEVCKMLIHM--RHPEVYHHLGVVPPRGVLLHGPPGCGK 311
>sp|Q9D5T0|ATAD1_MOUSE ATPase family AAA domain-containing protein 1 OS=Mus musculus
GN=Atad1 PE=1 SV=1
Length = 361
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 505 NEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGG-LLKPCRGI 563
+E+E I ++ + VT++DI L+++ L++ V+LP+++ LF+ LL+P +G+
Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGV 129
Query: 564 LLFGPPGLGKQCWPRPLPKRLG 585
LL+GPPG GK + K G
Sbjct: 130 LLYGPPGCGKTLIAKATAKEAG 151
>sp|Q8NBU5|ATAD1_HUMAN ATPase family AAA domain-containing protein 1 OS=Homo sapiens
GN=ATAD1 PE=1 SV=1
Length = 361
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 505 NEFEKRIRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGG-LLKPCRGI 563
+E+E I ++ + VT++DI L+++ L++ V+LP+++ LF+ LL+P +G+
Sbjct: 70 SEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDLKDTVILPIKKKHLFENSRLLQPPKGV 129
Query: 564 LLFGPPGLGKQCWPRPLPKRLG 585
LL+GPPG GK + K G
Sbjct: 130 LLYGPPGCGKTLIAKATAKEAG 151
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%)
Query: 518 SNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGLGKQCWP 577
+N V + DIG + ++E+V LPLR P LFK +KP RG+L++GPPG GK
Sbjct: 206 NNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMA 265
Query: 578 RPLPKRLG 585
R + G
Sbjct: 266 RAVANETG 273
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
Query: 511 IRPEVIPSNEISVTFADIGALEEIKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPG 570
+R V+ S ++VT+ D+G L+EIKE L+E V P+ PD + L P +G+L +GPPG
Sbjct: 474 LRETVVES--VNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPG 531
Query: 571 LGKQCWPRPLPKRLGQASLMSPCLPSL 597
GK + + + A+ +S P L
Sbjct: 532 TGKTLLAKAVATEV-SANFISVKGPEL 557
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.369
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 228,990,980
Number of Sequences: 539616
Number of extensions: 10003090
Number of successful extensions: 33105
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 497
Number of HSP's that attempted gapping in prelim test: 31865
Number of HSP's gapped (non-prelim): 1483
length of query: 613
length of database: 191,569,459
effective HSP length: 123
effective length of query: 490
effective length of database: 125,196,691
effective search space: 61346378590
effective search space used: 61346378590
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 64 (29.3 bits)