BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007210
(612 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9S746|HTH_ARATH Protein HOTHEAD OS=Arabidopsis thaliana GN=HTH PE=1 SV=1
Length = 594
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/586 (70%), Positives = 480/586 (81%), Gaps = 9/586 (1%)
Query: 28 SSSQAAASGAGAKNNLYKYRYPFIKEASSFTSPPPPSSSSFSPRNGDHHHHSAFDYIVVG 87
S S A+ G K+ YRY FI +AS+F+S SSSS NG S++DYIV+G
Sbjct: 17 SLSSTASKGKEKKSKFNPYRYTFIDKASTFSS----SSSSSFSSNG---QDSSYDYIVIG 69
Query: 88 GGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDG 147
GGTAGCPLAATLSQNF+VL+LERGGVPF++ NVSFL+NFH+ LAD S SASQ F+STDG
Sbjct: 70 GGTAGCPLAATLSQNFSVLVLERGGVPFTNANVSFLRNFHIGLADISASSASQAFVSTDG 129
Query: 148 VLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQEGWQK 207
V NARARVLGGGS INAGFY+RA + F++R GWD KLV ES+PWVER+IVHQPK WQK
Sbjct: 130 VYNARARVLGGGSCINAGFYSRADAAFVKRAGWDPKLVKESYPWVEREIVHQPKLTLWQK 189
Query: 208 ALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRAT 267
ALRDSLL+VGV PFNGFTYDH+ GTKIGGTIFDRFGRRHTAAELLA ANPQK+ VLI AT
Sbjct: 190 ALRDSLLEVGVRPFNGFTYDHVSGTKIGGTIFDRFGRRHTAAELLAYANPQKLRVLIYAT 249
Query: 268 VQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGP 327
VQKIVFDTSG RP+ GVIFKDE GNQHQA L+ SEVILS GAIG+PQML LSG+GP
Sbjct: 250 VQKIVFDTSGTRPRVTGVIFKDEKGNQHQALLSNRKGSEVILSSGAIGSPQMLMLSGIGP 309
Query: 328 KAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSG 387
K EL++L I VVL+N H+GKGMADNPMN + VPS P+EQSLI+TVGITK+GVY+EAS+G
Sbjct: 310 KKELQRLKIPVVLENEHVGKGMADNPMNTILVPSKAPIEQSLIQTVGITKMGVYVEASTG 369
Query: 388 FGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYI-RNKRTLPHEAFKGGFILEKI 446
FG+S +SIH H+GIMS + STIP KQR PEA Q YI RNK L HEAF G FILEK+
Sbjct: 370 FGQSPESIHTHYGIMSNKNELFSTIPAKQRRPEATQAYITRNKYQL-HEAFNGSFILEKL 428
Query: 447 ASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQ 506
A PIS G LSL+NTNVDDNPSV+FNYF HP+DL+RCV+ +R+ +K+V S FLNYTQCD+
Sbjct: 429 AYPISRGHLSLVNTNVDDNPSVTFNYFKHPVDLQRCVEAIRLVSKVVTSNRFLNYTQCDK 488
Query: 507 KSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLG 566
++V +L+ SV+AN+NL PK NDTKS+ QFCKDTV+TIWHYHGGC VGKVVS KVLG
Sbjct: 489 QNVHKMLSLSVKANINLRPKQLNDTKSMAQFCKDTVVTIWHYHGGCLVGKVVSPNRKVLG 548
Query: 567 IDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRLGKAAGV 612
+DRLRV+DGST+DESPGTNPQ T++MMGRYMGVKILR+RLG AGV
Sbjct: 549 VDRLRVIDGSTFDESPGTNPQATMMMMGRYMGVKILRERLGNKAGV 594
>sp|Q9SSM2|MDLL_ARATH (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana GN=At1g73050
PE=2 SV=1
Length = 552
Score = 456 bits (1173), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/552 (44%), Positives = 335/552 (60%), Gaps = 42/552 (7%)
Query: 62 PPSSSSFSPRNGDHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVS 121
PP F D +DYI+VGGGTAGCPLAATLSQ+F VLLLERGGVP++ NV
Sbjct: 35 PPGFMRFISNATDFASEDYYDYIIVGGGTAGCPLAATLSQSFRVLLLERGGVPYNRPNVM 94
Query: 122 FLQNFHMTLADTSP-QSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMG- 179
F TL D + S +Q FIS +GV NAR RVLGG S+INAGFY+RA QF E G
Sbjct: 95 SHDGFLTTLTDVNNFDSPAQSFISEEGVPNARGRVLGGSSAINAGFYSRADKQFFENSGL 154
Query: 180 -WDAKLVNESFPWVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTI 238
WD VN+S+ WVER IV +P+ WQ A+RD+LL+VGV PFNGFT +H GTKIGG+
Sbjct: 155 VWDLSSVNQSYEWVERAIVFRPQLRTWQTAIRDALLEVGVHPFNGFTLEHKVGTKIGGST 214
Query: 239 FDRFGRRHTAAELLASANPQKITVLIRATVQKIVF----DTSGKRPKAVGVIFKDENGNQ 294
FDR GRRH++A+LL A I V + ATV++++ SG A+GV+++D+ G
Sbjct: 215 FDRTGRRHSSADLLRYARSSNIRVAVYATVERVLLASSPSVSGSNVSAIGVVYRDQLGRF 274
Query: 295 HQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPM 354
H A + + EVILS GA+G+PQ+L LSG+GP++ L I V LD H+G + DNP
Sbjct: 275 HHALI--RDRGEVILSAGALGSPQLLFLSGIGPRSYLSTWGIPVALDQPHVGDFVYDNPR 332
Query: 355 NAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPP 414
N + + P+E SLI+ VG+T+ G ++EA+S +H
Sbjct: 333 NGISIVPPVPMENSLIQVVGVTEDGAFLEAASNVIPFASPLHSV---------------- 376
Query: 415 KQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFS 474
+IR + + I+EKI P+S G L L +T+V NP V FNYFS
Sbjct: 377 ----------FIRAPASPLYVPVTT--IMEKILGPVSIGLLRLASTDVRINPVVRFNYFS 424
Query: 475 HPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSL 534
P DL+RCV+G R +I++S+ ++ E N R +P ++ +
Sbjct: 425 DPQDLERCVNGTRKIGEILRSRAMQDFMIR-----EWFGNRRFRFVGAPLPVDQSNDLVM 479
Query: 535 EQFCKDTVITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMG 594
FC+ TV TIWHYHGG VGKVV ++ KV+G++ LR+VDGST++ SPGTNPQ T++M+G
Sbjct: 480 ADFCRRTVSTIWHYHGGAVVGKVVDSDLKVIGVNSLRLVDGSTFNISPGTNPQATLMMLG 539
Query: 595 RYMGVKILRQRL 606
RYMG+K+LR+R+
Sbjct: 540 RYMGLKMLRERM 551
>sp|P52707|MDL3_PRUSE (R)-mandelonitrile lyase 3 OS=Prunus serotina GN=MDL3 PE=2 SV=1
Length = 573
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 208/543 (38%), Positives = 311/543 (57%), Gaps = 41/543 (7%)
Query: 67 SFSPRNGDHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNF 126
SF D ++DYI+VGGGTAGCPLAATLS N++VL+LERG +P N+ F
Sbjct: 40 SFVYDATDPELEGSYDYIIVGGGTAGCPLAATLSANYSVLVLERGSLPTEYPNLLISDGF 99
Query: 127 HMTLA-DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMG--WDAK 183
L + ++ + F+S DG+ N R RVLGG S INAG Y RA++ F + G WD
Sbjct: 100 VYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSMINAGVYVRANTSFFNQTGIEWDMD 159
Query: 184 LVNESFPWVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFG 243
LVN+++ WVE IV +P + WQ + + L+ G+ P NGF+ DH+ GT++ G+ FD G
Sbjct: 160 LVNQTYEWVEDTIVFEPDSQTWQTVIGTAYLEAGILPNNGFSVDHLAGTRLTGSTFDNNG 219
Query: 244 RRHTAAELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNP 303
RH + ELL +P + V ++A V+KI+F ++ A+GVI+ D NG HQAF+ G
Sbjct: 220 TRHASDELLNKGDPNNLRVAVQAAVEKIIFSSNTSGVTAIGVIYTDSNGTTHQAFVRG-- 277
Query: 304 KSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNR 363
+ EVILS G IG+PQ+L LSGVGP++ L LNISVV + ++G+ + DNP N + +
Sbjct: 278 EGEVILSAGPIGSPQLLLLSGVGPESYLTSLNISVVASHPYVGQYIYDNPRNFINILPPN 337
Query: 364 PVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQ 423
P+E S + +GIT D C + + S P
Sbjct: 338 PIEASTVTVLGITS---------------DFYQCSISSLPFDTPPFSFFP---------- 372
Query: 424 DYIRNKRTLPHEAFKGGFILEKIASPISTGELSL-INTNVDDNPSVSFNYFSHPLDLKRC 482
LP++ F I+ K+ P+S G ++L +++V P+V FNY+S+ DL C
Sbjct: 373 ---TTSYPLPNQTF--AHIVNKVPGPLSHGTVTLNSSSDVRVGPNVKFNYYSNLTDLSHC 427
Query: 483 VDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTV 542
V G++ +++ + Y D ++ + +P++ D + E FC+++V
Sbjct: 428 VSGMKKLGEVLSTDALEPYKVEDLPGIDGFNILGIP-----LPENQTDDAAFETFCRESV 482
Query: 543 ITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKIL 602
+ WHYHGGC VGKV+ ++V GI+ LRVVDGST+ +P ++PQG LM+GRYMG++IL
Sbjct: 483 ASYWHYHGGCLVGKVLDDGFRVTGINALRVVDGSTFPSTPASHPQGFYLMLGRYMGIQIL 542
Query: 603 RQR 605
++R
Sbjct: 543 QER 545
>sp|Q945K2|MDL2_PRUDU (R)-mandelonitrile lyase 2 OS=Prunus dulcis GN=MDL2 PE=1 SV=1
Length = 563
Score = 384 bits (987), Expect = e-106, Method: Compositional matrix adjust.
Identities = 214/543 (39%), Positives = 310/543 (57%), Gaps = 42/543 (7%)
Query: 67 SFSPRNGDHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNF 126
SF+ D ++DY++VGGGT+GCPLAATLS+ + VL+LERG +P + NV F
Sbjct: 40 SFAYDATDLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGF 99
Query: 127 HMTLA-DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMG--WDAK 183
L + ++ + F+S DG+ N R RVLGG S INAG Y RA++ G WD
Sbjct: 100 VYNLQQEDDGKTPVERFVSEDGIDNVRGRVLGGTSIINAGVYARANTSIYSASGVDWDMD 159
Query: 184 LVNESFPWVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFG 243
LVN+++ WVE IV++P + WQ + + L+ GV P +GF+ DH GT+I G+ FD G
Sbjct: 160 LVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRITGSTFDNKG 219
Query: 244 RRHTAAELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNP 303
RH A ELL N + V + A+V+KI+F ++ A GVI++D NG HQAF+
Sbjct: 220 TRHAADELLNKGNSNNLRVGVHASVEKIIF-SNAPGLTATGVIYRDSNGTPHQAFVRS-- 276
Query: 304 KSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNR 363
K EVI+S G IGTPQ+L LSGVGP++ L LNI VVL + ++G+ + DNP N + +
Sbjct: 277 KGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPN 336
Query: 364 PVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQ 423
P+E +++ +GI S D C + T PP P A
Sbjct: 337 PIEPTIVTVLGI---------------SNDFYQCSFSSLPF------TTPPFGFFPSA-- 373
Query: 424 DYIRNKRTLPHEAFKGGFILEKIASPISTGELSL-INTNVDDNPSVSFNYFSHPLDLKRC 482
LP+ F K+A P+S G L+L ++NV +P+V FNY+S+ DL C
Sbjct: 374 -----SYPLPNSTF--AHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHC 426
Query: 483 VDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTV 542
V G++ +++ + Y D VE + +PK D + E FC+++V
Sbjct: 427 VSGMKKIGELLSTDALKPYKVEDLPGVEGFNILGIP-----LPKDQTDDAAFETFCRESV 481
Query: 543 ITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKIL 602
+ WHYHGGC VGKV+ +++V GI+ LRVVDGST+ +P ++PQG LM+GRY+G+KIL
Sbjct: 482 ASYWHYHGGCLVGKVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKIL 541
Query: 603 RQR 605
++R
Sbjct: 542 QER 544
>sp|O50048|MDL2_PRUSE (R)-mandelonitrile lyase 2 OS=Prunus serotina GN=MDL2 PE=2 SV=1
Length = 576
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 215/543 (39%), Positives = 305/543 (56%), Gaps = 49/543 (9%)
Query: 74 DHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLA-D 132
D +DYI+VGGGTAGCPLAATLS N++VL+LERG +P N+ F L +
Sbjct: 48 DTELEGTYDYIIVGGGTAGCPLAATLSANYSVLVLERGTLPTEYPNLLTSDGFIYNLQQE 107
Query: 133 TSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMG--WDAKLVNESFP 190
Q+ + F+S DG+ N R RVLGG S INAG Y RA++ F + G WD LVN+++
Sbjct: 108 DDGQTPVERFVSGDGIDNVRGRVLGGTSMINAGVYVRANTSFFNQTGIEWDMDLVNKTYD 167
Query: 191 WVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAE 250
WVE IV +P + WQ + L+VG+ P NGF+ DH+ GT++ G+ FD G RH + E
Sbjct: 168 WVEDTIVFKPDFQFWQNLTGTAFLEVGILPDNGFSLDHLEGTRLTGSTFDNNGTRHASDE 227
Query: 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILS 310
LL +P + V + A V+KI+F + A+GVI+ D NG HQAF+ G+ EVILS
Sbjct: 228 LLNKGDPNNLRVAVHAAVEKIIFSSDSSGVTAIGVIYTDSNGTTHQAFVRGD--GEVILS 285
Query: 311 CGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLI 370
G IG+PQ+L LSGVG ++ L LNISVV + ++G+ + DNP N + + P+E S +
Sbjct: 286 AGPIGSPQLLLLSGVGLESYLTSLNISVVASHPYVGQYIYDNPRNFINILPPNPIEASTV 345
Query: 371 ETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIP----PKQRTPEAIQDYI 426
+GIT D C S ST P P P
Sbjct: 346 TVLGITS---------------DFYQC-----SISSLPFSTAPFGFFPNPTYP------- 378
Query: 427 RNKRTLPHEAFKGGFILEKIASPISTGELSLINT-NVDDNPSVSFNYFSHPLDLKRCVDG 485
LP+ F I+ K+ P+S G + L +T +V P+V+FNY+S+ DL CV G
Sbjct: 379 -----LPNTTF--AHIVNKVPGPLSHGTVLLQSTSDVRVAPNVTFNYYSNTTDLAHCVSG 431
Query: 486 VRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITI 545
++ + + S Y D +E + +P++ D + E FC++ V +
Sbjct: 432 MKKIGEFLSSDALKPYKVEDLPGIEGFDILGIP-----LPENQTDDAAFETFCREAVASY 486
Query: 546 WHYHGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQR 605
WHYHGGC VG+V+ +++V GI+ LRVVDGST+ +P ++PQG LM+GRYMG KIL++R
Sbjct: 487 WHYHGGCLVGEVLDDDFRVTGINALRVVDGSTFPSTPASHPQGFYLMLGRYMGTKILQER 546
Query: 606 LGK 608
L
Sbjct: 547 LAS 549
>sp|P52706|MDL1_PRUSE (R)-mandelonitrile lyase 1 OS=Prunus serotina GN=MDL1 PE=1 SV=1
Length = 563
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 211/536 (39%), Positives = 305/536 (56%), Gaps = 42/536 (7%)
Query: 74 DHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLA-D 132
D ++DY++VGGGT+GCPLAATLS+ + VL+LERG +P + NV F L +
Sbjct: 47 DLELEGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQE 106
Query: 133 TSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMG--WDAKLVNESFP 190
++ + F+S DG+ N R RVLGG S INAG Y RA++ G WD LVN+++
Sbjct: 107 DDGKTPVERFVSEDGIDNVRGRVLGGTSMINAGVYARANTSIYSASGVDWDMDLVNKTYE 166
Query: 191 WVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAE 250
WVE IV +P + WQ + L+ GV P +GF+ DH GT+I G+ FD G RH A E
Sbjct: 167 WVEDTIVFKPNYQPWQSVTGTAFLEAGVDPNHGFSLDHEAGTRITGSTFDNKGTRHAADE 226
Query: 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILS 310
LL N + V + A+V+KI+F ++ A GVI++D NG H+AF+ K EVI+S
Sbjct: 227 LLNKGNSNNLRVGVHASVEKIIF-SNAPGLTATGVIYRDSNGTPHRAFVRS--KGEVIVS 283
Query: 311 CGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLI 370
G IGTPQ+L LSGVGP++ L LNI VVL + ++G+ + DNP N + + P+E +++
Sbjct: 284 AGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIV 343
Query: 371 ETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKR 430
+GI S D C + T PP P
Sbjct: 344 TVLGI---------------SNDFYQCSFSSLPF------TTPPFSFFPST-------SY 375
Query: 431 TLPHEAFKGGFILEKIASPISTGELSL-INTNVDDNPSVSFNYFSHPLDLKRCVDGVRMA 489
LP+ F K+A P+S G L+L ++NV +P+V FNY+S+P DL CV G++
Sbjct: 376 PLPNSTF--AHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNPTDLSHCVSGMKKI 433
Query: 490 AKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYH 549
+++ + Y D +E + +PK D + E FC+++V + WHYH
Sbjct: 434 GELLSTDALKPYKVEDLPGIEGFNILGIP-----LPKDQTDDAAFETFCRESVASYWHYH 488
Query: 550 GGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQR 605
GGC VGKV+ +++V GID LRVVDGST+ +P ++PQG LM+GRY+G+KIL++R
Sbjct: 489 GGCLVGKVLDGDFRVTGIDALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQER 544
>sp|O82784|MDL4_PRUSE (R)-mandelonitrile lyase 4 OS=Prunus serotina GN=MDL4 PE=2 SV=1
Length = 574
Score = 381 bits (978), Expect = e-104, Method: Compositional matrix adjust.
Identities = 209/538 (38%), Positives = 299/538 (55%), Gaps = 45/538 (8%)
Query: 74 DHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADT 133
D ++DYI+VGGGT+GCPLAATLS N++VL+LERG + N + F L
Sbjct: 48 DLELEGSYDYIIVGGGTSGCPLAATLSANYSVLVLERGTIATEYPNTLTVDGFAYNLQQQ 107
Query: 134 SP-QSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMG--WDAKLVNESFP 190
++ + F+S DG+ N R+R+LGG + INAG Y RA+ F G WD LVNE++
Sbjct: 108 DDGKTPVERFVSEDGIDNVRSRILGGTTIINAGVYARANESFYNNSGVEWDLDLVNEAYE 167
Query: 191 WVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAE 250
WVE IV++P + WQ + L+ GV P NGF H GT++ G+ FD G RH + E
Sbjct: 168 WVEDAIVYKPSNQSWQSITGTAFLEAGVHPDNGFGLVHEEGTRLTGSTFDNSGTRHASDE 227
Query: 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILS 310
LL +P + V + A VQKI+F T AVGV++ D NG H+A ++G K EVILS
Sbjct: 228 LLNKGDPDNLKVAVEAAVQKIIFSTESSGLTAVGVVYTDSNGTSHRALVSG--KGEVILS 285
Query: 311 CGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLI 370
G +GTPQ+L LSGVGP++ L LNISVV + ++G+ + DNP N + + P+E S +
Sbjct: 286 AGTLGTPQLLLLSGVGPESYLTSLNISVVASHPYVGQYVNDNPRNFINILPPNPIEPSTV 345
Query: 371 ETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKR 430
+GIT D C + + S P
Sbjct: 346 TVLGITS---------------DFYQCSLSSLPFDTPPFSLFP-------------TTSY 377
Query: 431 TLPHEAFKGGFILEKIASPISTGELSL-INTNVDDNPSVSFNYFSHPLDLKRCVDGVRMA 489
LP++ F I+ K+ P+S G L+L ++NV P+V FNY S P+DL CV G++
Sbjct: 378 PLPNQTF--AHIVSKVPGPLSAGSLTLQSSSNVSVAPNVKFNYCSDPVDLTHCVSGMKKI 435
Query: 490 AKIVQSKHFLNYTQCDQKSVEA--ILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWH 547
+ + Y D ++ IL + P++ D + E+FC+DTV + WH
Sbjct: 436 GVFLSTDALKPYKVDDLPGIDGFNILGTPL-------PENQTDDAAFEKFCRDTVASYWH 488
Query: 548 YHGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQR 605
YHGG VGKV+ ++V GI+ LRVVDGST+ +P ++PQG LM+GRY+G KI+++R
Sbjct: 489 YHGGAIVGKVIDGNFRVTGINALRVVDGSTFPATPASHPQGFYLMLGRYVGTKIVQER 546
>sp|O24243|MDL1_PRUDU (R)-mandelonitrile lyase 1 OS=Prunus dulcis GN=MDL1 PE=2 SV=1
Length = 559
Score = 369 bits (947), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/538 (38%), Positives = 308/538 (57%), Gaps = 45/538 (8%)
Query: 74 DHHHHSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADT 133
D ++DYIV+GGGT+GCPLAATLS+ + VLLLERG + N F L
Sbjct: 47 DTSLEGSYDYIVIGGGTSGCPLAATLSEKYKVLLLERGTIATEYPNTLTADGFAYNLQQQ 106
Query: 134 SP-QSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMG--WDAKLVNESFP 190
++ + F+S DG+ N RAR+LGG + INAG Y RA+ F + G WD LVN+++
Sbjct: 107 DDGKTPVERFVSEDGIDNVRARILGGTTIINAGVYARANISFYSQTGIEWDLDLVNKTYE 166
Query: 191 WVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAE 250
WVE IV +P + WQ + + L+ G+ P NGF+ DH GT++ G+ FD G RH A E
Sbjct: 167 WVEDAIVVKPNNQSWQSVIGEGFLEAGILPDNGFSLDHEAGTRLTGSTFDNNGTRHAADE 226
Query: 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILS 310
LL +P + V ++A+V+KI+F ++ A+GVI+ D +GN HQAF+ GN EVI+S
Sbjct: 227 LLNKGDPNNLLVAVQASVEKILFSSNTSNLSAIGVIYTDSDGNSHQAFVRGN--GEVIVS 284
Query: 311 CGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAV--FVPSNRPVEQS 368
G IGTPQ+L LSGVGP++ L LNI+VV N ++G+ + +NP N + F P+ P+E S
Sbjct: 285 AGTIGTPQLLLLSGVGPESYLSSLNITVVQPNPYVGQFLYNNPRNFINNFPPN--PIEAS 342
Query: 369 LIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRN 428
++ +GI Y + S LS++P TP +
Sbjct: 343 VVTVLGIRS--DYYQVS-----------------------LSSLP--FSTP-PFSLFPTT 374
Query: 429 KRTLPHEAFKGGFILEKIASPISTGELSL-INTNVDDNPSVSFNYFSHPLDLKRCVDGVR 487
LP+ F I+ ++ P+S G ++L +++V P++ FNY+S+ DL CV G++
Sbjct: 375 SYPLPNSTF--AHIVSQVPGPLSHGSVTLNSSSDVRIAPNIKFNYYSNSTDLANCVSGMK 432
Query: 488 MAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWH 547
++++K Y D ++ V +P++ D S E FC D V + WH
Sbjct: 433 KLGDLLRTKALEPYKARDVLGIDGFNYLGVP-----LPENQTDDASFETFCLDNVASYWH 487
Query: 548 YHGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQR 605
YHGG VGKV+ ++V+GI LRVVD ST+ P ++PQG LM+GRY+G++IL++R
Sbjct: 488 YHGGSLVGKVLDDSFRVMGIKALRVVDASTFPYEPNSHPQGFYLMLGRYVGLQILQER 545
>sp|C3MIE4|BETA_RHISN Choline dehydrogenase OS=Rhizobium sp. (strain NGR234) GN=betA PE=3
SV=1
Length = 549
Score = 115 bits (289), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 146/571 (25%), Positives = 237/571 (41%), Gaps = 83/571 (14%)
Query: 82 DYIVVGGGTAGCPLAATLSQNF--TVLLLERGGV---PFSDVNVSFLQNFHMTLADTSPQ 136
DYI++G G+AG LA LS++ +V++LE GG PF + + M +
Sbjct: 4 DYIIIGSGSAGSALAHRLSEDSRNSVIVLEFGGTDIGPFIQMPAALAWPMSMNRYNWGYL 63
Query: 137 SASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIER---MGWDAKLVNESFPWVE 193
S + ++ + R +V+GG SSIN Y R ++ +R +G + P+ +
Sbjct: 64 SEPEPHLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFDRWEQLGAKGWAYADVLPYFK 123
Query: 194 RQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIY---GTKIGGTIFDRF-------- 242
R ++GW+ D L V P + H + G + G + D +
Sbjct: 124 RMEHSHGGEDGWRGT--DGPLHVQRGPVKNPLF-HAFVEAGKQAGFEMTDDYNGSKQEGF 180
Query: 243 ---------GRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENG 292
GRR +AA L A + LIR +KIV + +A GV + E G
Sbjct: 181 GLMEQTTWRGRRWSAASAYLKPALKRPNVQLIRCFARKIVIENG----RATGV--EIERG 234
Query: 293 NQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADN 352
+ + A EVI+S + +P++L LSG+GP A L+ L I V +D +G+ + D+
Sbjct: 235 GRIEVVKA---NREVIVSASSFNSPKLLMLSGIGPAAHLKDLGIDVKVDRPGVGQNLQDH 291
Query: 353 PMNAVFVP-SNRPVEQSLIETVGITKLGV----YIEASSGFGESRDSIHCHHGIMSAEIG 407
M F S +PV SL + GV ++ SG G S C + + G
Sbjct: 292 -MEFYFQQISTKPV--SLYSWLPWFWQGVAGAQWLFFKSGLGISNQFEAC--AFLRSAPG 346
Query: 408 QLSTIPPKQRTPEAIQDYIRNKRTLPHEAFK--GGFILEKIASPISTGELSLINTNVDDN 465
P AI+ K F+ G+ L K S G ++L ++ +
Sbjct: 347 VKQPDIQYHFLPVAIR--YDGKAAANTHGFQVHVGYNLSK-----SRGSVTLRASDPKAD 399
Query: 466 PSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVP 525
P + FNY SHP D ++ VR+ +I K F Y + + E +
Sbjct: 400 PVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDQYRGPEIQPGERV------------- 446
Query: 526 KHTNDTKSLEQFCKDTVITIWHYHGGCHVGK------VVSTEYKVLGIDRLRVVDGSTYD 579
+ ++ F ++ + + +H G C +G VV E +V+G+D LRV D S +
Sbjct: 447 ---QTDEEIDAFLREHLESAYHPCGTCKMGSKDDPMAVVDPETRVIGVDGLRVADSSIFP 503
Query: 580 ESPGTNPQGTVLMMGRYMGVKIL-RQRLGKA 609
N +M G IL +Q L ++
Sbjct: 504 HVTYGNLNAPSIMTGEKAADHILGKQPLARS 534
>sp|Q7MF12|BETA_VIBVY Choline dehydrogenase OS=Vibrio vulnificus (strain YJ016) GN=betA
PE=3 SV=1
Length = 560
Score = 115 bits (287), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 149/581 (25%), Positives = 239/581 (41%), Gaps = 107/581 (18%)
Query: 81 FDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSA 138
+DYI+VG G+AGC LA LS+ + +VLLLE GG SD ++ ++ S + A
Sbjct: 5 YDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGG---SDKSIFIQMPTALSYPMNSEKYA 61
Query: 139 SQYFISTDGVLNAR------ARVLGGGSSINAGFYTRASSQFIERM------GWDAKLVN 186
Q+ + L+ R +VLGG SSIN Y R + + GW+ +
Sbjct: 62 WQFETDAEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQACL 121
Query: 187 ESFPWVERQIVHQPKQEGWQ-------------KALRDSLLDVG-------VSPFNGFT- 225
F E I + + G L + +D G S +NG+
Sbjct: 122 PYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYNGYQQ 181
Query: 226 --YDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRATV-QKIVFDTSGKRPKA 282
+ ++ T G R T+ L+ A + LI+ V Q+I+ + +A
Sbjct: 182 EGFGPMHMTVKNGV------RASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEK----RA 231
Query: 283 VGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDN 342
VGV F + G F K+EVI S G+IG+ Q+L+LSG+GPK LEK ++ V
Sbjct: 232 VGVEF-ELAGELRTCFA----KNEVISSAGSIGSVQLLQLSGIGPKTVLEKAGVTPVYHL 286
Query: 343 AHIGKGMADNPMNAVFVPSNRPV---------EQSLIETVGI-TKLGVYIEASSGFGESR 392
+G+ + D+ +P+ + LI T I T+ G + A++ F ES
Sbjct: 287 PGVGQNLQDHLEVYFQYHCQKPITLNGKLDWFSKGLIGTEWILTRKG--LGATNHF-ESC 343
Query: 393 DSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG-GFILE-KIASPI 450
I G+ I Q +P R AF G GF + P
Sbjct: 344 AFIRSRAGLKWPNI-QYHFLPAAMRYDG-------------QAAFDGHGFQVHVGPNKPE 389
Query: 451 STGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVE 510
S G + +++ N D P + FNY S D + D +R+ +I+ Q +++
Sbjct: 390 SRGRVEIVSANPLDKPKIQFNYLSTERDRQDWRDCIRLTREILA-----------QPAMD 438
Query: 511 AILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKV 564
++ +N+ ++Q+ K+ V + +H C +G V+ E +V
Sbjct: 439 EFRGEEIQPGINVA-----TDAEIDQWVKENVESAYHPSCSCKMGADDDPMAVLDEECRV 493
Query: 565 LGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQR 605
GI LRVVD S + P N +M+ IL ++
Sbjct: 494 RGITNLRVVDSSVFPTIPNGNLNAPTIMVAERAADLILHKQ 534
>sp|Q8D3K2|BETA_VIBVU Choline dehydrogenase OS=Vibrio vulnificus (strain CMCP6) GN=betA
PE=3 SV=1
Length = 560
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 145/578 (25%), Positives = 234/578 (40%), Gaps = 101/578 (17%)
Query: 81 FDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSA 138
+DYI+VG G+AGC LA LS+ + +VLLLE GG SD ++ ++ S + A
Sbjct: 5 YDYIIVGAGSAGCVLADRLSESGDHSVLLLEAGG---SDKSIFIQMPTALSYPMNSEKYA 61
Query: 139 SQYFISTDGVLNAR------ARVLGGGSSINAGFYTRASSQFIERM------GWDAKLVN 186
Q+ + L+ R +VLGG SSIN Y R + + GW+ +
Sbjct: 62 WQFETDAEADLDGRRLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEEQGAKGWNYQACL 121
Query: 187 ESFPWVERQIVHQPKQEGWQ-------------KALRDSLLDVG-------VSPFNGFT- 225
F E I + + G L + +D G S +NG+
Sbjct: 122 PYFRRAENWIDGEDEYRGGDGPLSTCAGNKMTLNPLYRAFIDAGKEAGYPETSDYNGYQQ 181
Query: 226 --YDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRATV-QKIVFDTSGKRPKA 282
+ ++ T G R T+ L+ A + LI+ V Q+I+ + +A
Sbjct: 182 EGFGPMHMTVKNGV------RASTSNAYLSRAKKRSNFKLIKGVVVQRILLEEK----RA 231
Query: 283 VGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDN 342
VGV F + G F K+EVI S G+IG+ Q+L+LSG+GPK LEK ++ V
Sbjct: 232 VGVEF-ELAGELRTCFA----KNEVISSAGSIGSVQLLQLSGIGPKTVLEKAGVTPVHHL 286
Query: 343 AHIGKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFG-----ESRDSI 395
+G+ + D+ +P+ ++ +G +I G G ES I
Sbjct: 287 PGVGQNLQDHLEVYFQYHCQKPITLNGKLDWFSKGLIGAEWILTRKGLGATNHFESCAFI 346
Query: 396 HCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG-GFILE-KIASPISTG 453
G+ I Q +P R AF G GF + P S G
Sbjct: 347 RSRAGLKWPNI-QYHFLPAAMRYDG-------------QAAFDGHGFQVHVGPNKPESRG 392
Query: 454 ELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAIL 513
+ +++ N D P + FNY S D + D +R+ +I+ Q +++
Sbjct: 393 RVEIVSANPSDKPKIQFNYLSTERDRQDWRDCIRLTREILA-----------QPAMDEFR 441
Query: 514 NASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGI 567
++ +N+ ++Q+ K+ V + +H C +G V+ E +V GI
Sbjct: 442 GEEIQPGINVA-----TDAEIDQWVKENVESAYHPSCSCKMGADDDPMAVLDEECRVRGI 496
Query: 568 DRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQR 605
LRVVD S + P N +M+ IL ++
Sbjct: 497 TNLRVVDSSVFPTIPNGNLNAPTIMVAERAADLILHKQ 534
>sp|A7N2P9|BETA_VIBHB Choline dehydrogenase OS=Vibrio harveyi (strain ATCC BAA-1116 /
BB120) GN=betA PE=3 SV=1
Length = 569
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 157/586 (26%), Positives = 242/586 (41%), Gaps = 115/586 (19%)
Query: 81 FDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSA 138
+DYI+VG G+AGC LA LS++ VLLLE GG SD ++ F+Q M A + P +
Sbjct: 5 YDYIIVGAGSAGCVLADRLSESGQHQVLLLEAGG---SDKSI-FIQ---MPTALSYPMNT 57
Query: 139 SQYFISTDGVLNA----------RARVLGGGSSINAGFYTRA-SSQFIERMGWDAKLVN- 186
+Y + V R +VLGG SSIN Y R + F E AK N
Sbjct: 58 EKYAWQFETVAEEGLDGRQLHCPRGKVLGGSSSINGMVYVRGHACDFDEWEAEGAKGWNY 117
Query: 187 -ESFPWVERQIVHQPKQEGWQ---KALRDSLLDVGVSPFNGFTYDHIYGTKI-------- 234
P+ K E W R VG N + +Y I
Sbjct: 118 QACLPYFR-------KAETWTGGADEYRGGSGPVGTCNGNDMKLNPLYQAFIEAGKDAGY 170
Query: 235 ------GGTIFDRFGRRH----------TAAELLASANPQ-KITVLIRATVQKIVFDTSG 277
G + FG H T+ L+ A + T++ T +I+ + G
Sbjct: 171 PETQDYNGYQQEGFGPMHMTVDKGVRASTSNAYLSRAKKRSNFTLMKGVTAHRILLE--G 228
Query: 278 KRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNIS 337
K KAVG+ F +++G Q F EV+ S G+IG+ Q+L+LSG+GPK L+K I
Sbjct: 229 K--KAVGIEF-EQSGEIKQCF----ANKEVVSSAGSIGSVQLLQLSGIGPKTVLDKAGIE 281
Query: 338 VVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGV----YIEASSGFG---- 389
V +GK + D+ +P+ +L +G+ G+ +I G G
Sbjct: 282 VKHTLEGVGKNLQDHLEVYFQYHCKQPI--TLNSKLGLISKGLIGTEWILTRKGLGATNH 339
Query: 390 -ESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG-GFILE-KI 446
ES I G+ S I Q +P R AF G GF +
Sbjct: 340 FESCAFIRSREGLKSPNI-QFHFLPAAMRYD-------------GRAAFDGHGFQVHVGP 385
Query: 447 ASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQ 506
P S G + +++ N +D P + FNY S D + D +R+ +I+ +Q
Sbjct: 386 NKPESRGSVEVVSANPNDKPKIEFNYISTEQDKQDWRDCIRLTREIL-----------NQ 434
Query: 507 KSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGK------VVST 560
+++A ++ +N+ T+D +++ ++ K V + +H C +G V++
Sbjct: 435 PAMDAFRGEEIQPGLNI----TSD-EAIGEWVKQNVESAYHPSCSCKMGSNDDPMAVLNE 489
Query: 561 EYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRL 606
+V GI+ LRVVD S + P N +M+ IL L
Sbjct: 490 ACQVRGIEGLRVVDSSIFPTIPNGNLNAPTIMVAERAADMILGNTL 535
>sp|B9JBA2|BETA_AGRRK Choline dehydrogenase OS=Agrobacterium radiobacter (strain K84 /
ATCC BAA-868) GN=betA PE=3 SV=1
Length = 549
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 139/568 (24%), Positives = 241/568 (42%), Gaps = 77/568 (13%)
Query: 82 DYIVVGGGTAGCPLAATLSQN--FTVLLLERGGV---PFSDVNVSFLQNFHMTLADTSPQ 136
D++++G G+AG +A+ LS++ TV++LE GG PF + + M +
Sbjct: 4 DFVIIGSGSAGSAMASRLSEDGKHTVIVLEFGGSDVGPFIQMPAALAWPMSMDRYNWGYL 63
Query: 137 SASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFI---ERMGWDAKLVNESFPWVE 193
S + ++ + R +V+GG SSIN Y R ++ E +G + P+ +
Sbjct: 64 SEPEPQLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAQGWAYADVLPYFK 123
Query: 194 RQIVHQPKQEGWQ--------------KALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIF 239
R +EGW+ L + ++ G T D+ G + G +
Sbjct: 124 RMEHSHGGEEGWRGTDGPLHVRRGDARNPLFHAFIEAGKQAGFEATEDYNGGKQEGFGLM 183
Query: 240 DR---FGRRHTAA-ELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQH 295
++ GRR +AA L A + LIR +K+V + +A GV + E G +
Sbjct: 184 EQTTWMGRRWSAATAYLKPALKRPNVELIRCFARKVVIENG----RATGV--EIERGGKI 237
Query: 296 QAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMN 355
+ A SEVI+S + +P++L LSG+GP L+++ I V +D +G + D+ M
Sbjct: 238 EIVKA---NSEVIVSASSFNSPKLLMLSGIGPGQHLQEMGIEVKIDRPGVGANLQDH-ME 293
Query: 356 AVFVPSN-RPVEQSLIETVGITKLGV----YIEASSGFGESRDSIHCHHGIMSAEIGQLS 410
F ++ +PV SL + G+ ++ SG G S C + + G
Sbjct: 294 FYFQQTSLKPV--SLYSWLPWYMQGIVGAQWMFFKSGLGTSNQFEAC--AFLRSAPGVKQ 349
Query: 411 TIPPKQRTPEAIQDYIRNKRTLPHEAFKG--GFILEKIASPISTGELSLINTNVDDNPSV 468
P AI K F+ G+ L K S G ++L +++ +P +
Sbjct: 350 PDIQYHFLPVAIS--YDGKAAAKSHGFQAHVGYNLSK-----SRGAVTLRSSDPKADPVI 402
Query: 469 SFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHT 528
FNY SHP D ++ VR+ +I K F +Y + + P
Sbjct: 403 RFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDYRGPE---------------IQPGPDVQ 447
Query: 529 NDTKSLEQFCKDTVITIWHYHGGCHVGK------VVSTEYKVLGIDRLRVVDGSTYDESP 582
D + ++ F ++ + + +H G C +G VV + +V+G++ LRV D S +
Sbjct: 448 TDDQ-IDAFLREHLESAYHPCGTCKMGSKDDPMAVVDPDTRVIGVEGLRVADSSIFPSLT 506
Query: 583 GTNPQGTVLMMGRYMGVKIL-RQRLGKA 609
N G +M G IL + RL ++
Sbjct: 507 YGNLNGPSIMTGEKAADHILGKPRLARS 534
>sp|Q9WWW2|ALKJ_PSEPU Alcohol dehydrogenase [acceptor] OS=Pseudomonas putida GN=alkJ PE=3
SV=1
Length = 552
Score = 114 bits (285), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 158/574 (27%), Positives = 237/574 (41%), Gaps = 95/574 (16%)
Query: 81 FDYIVVGGGTAGCPLAATLSQNFT--VLLLERGGVPFSDVNVSFLQNFHMTLADTSP--- 135
+DYI+VG G+AGC LA LS + + V LLE G D N + L S
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGP---RDTNPLIHMPLGIALLSNSKKLN 58
Query: 136 ---QSASQYFISTDGVLNARARVLGGGSSINAGFYTRASS---QFIERMG---WDAKLVN 186
Q+A Q ++ + R + LGG SSINA Y R Q E+ G W K
Sbjct: 59 WAFQTAPQQHLNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQAWEQAGGEYWGWKRAF 118
Query: 187 ESFPWVE------RQIVHQPKQEGWQKALRD------SLLDVGVSP---FNG-FTYDHIY 230
F +E + H E L+D S + G+ FNG F H
Sbjct: 119 ALFKKLEHNQRFDKSNYHGTDGELAVSDLKDLNPLSKSFVQAGMEAKISFNGDFNGAHQE 178
Query: 231 GTKIGGTIFDRFGRRHTAAE--LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFK 288
G + + G+R ++A L + + ++ A K++F+ KAVGV +
Sbjct: 179 GVGFY-QVTQKHGQRWSSARAFLHDVIDRPNLDIITEAHATKVLFEDR----KAVGVSYI 233
Query: 289 DENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKG 348
+N +Q + EVILS GA+ TPQ+L LSGVG AEL++ I++V D +GK
Sbjct: 234 QKNMHQQ---VKTTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEHGIALVHDLPEVGKN 290
Query: 349 MADNPMNAVFVPSNRP----VEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSA 404
+ D+ + +N V S I G+ L YI GF S A
Sbjct: 291 LQDHLDITLMCAANSRTPIGVAFSFIPR-GLVGLFSYIFKRKGFLTSN----------VA 339
Query: 405 EIGQLSTIPPKQRTPEA----IQDYIRNK-RTLPHEAFKGGFILEKI-ASPISTGELSLI 458
E G P++ P + Y+++ R + A G+ L P S G + L
Sbjct: 340 ESGGFVKSSPERDRPNLQFHFLPTYLKDHGRKI---AVGYGYTLHICDLLPKSRGRIGLK 396
Query: 459 NTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQ----SKHFLNYTQCDQKSVEAILN 514
+ N D+P + NY S P D+K + G+++ I +KHF E +
Sbjct: 397 SANPMDDPLIDPNYLSDPEDIKTMIAGIKIGRAIFDAPSMAKHF---------KREIVPG 447
Query: 515 ASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGK----VVSTEYKVLGIDRL 570
+V ++ +V D +S + TI+H G C +GK VV +V G+ +
Sbjct: 448 PAVTSDDEIVA----DIRSRAE-------TIYHPVGTCRMGKDPASVVDPCLQVRGLRNI 496
Query: 571 RVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQ 604
RVVD S N +M+ I+R+
Sbjct: 497 RVVDASIMPNLVAGNTNAPTIMIAENAAEIIVRK 530
>sp|Q6LGH5|BETA_PHOPR Choline dehydrogenase OS=Photobacterium profundum GN=betA PE=3 SV=1
Length = 568
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 146/584 (25%), Positives = 243/584 (41%), Gaps = 113/584 (19%)
Query: 78 HSAFDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLADTSP 135
++ +DYI+VG G+AGC LA LS + +LLLE GG SD ++ ++ S
Sbjct: 2 NTTYDYIIVGAGSAGCVLADRLSASGEHYILLLEAGG---SDRSIFIQMPTALSYPMNSE 58
Query: 136 QSASQYFISTDGVLNARA------RVLGGGSSINAGFYTRASS----QFIER--MGWDAK 183
+ A Q+ + L++R+ RVLGG SSIN Y R + +++E+ GW +
Sbjct: 59 KYAWQFETQPEAGLDSRSLHCPRGRVLGGSSSINGMVYVRGHACDYDEWVEQGAEGWSYQ 118
Query: 184 LVNESFPWVERQIVHQPKQEGW---QKALRDSLLDVGVSPFNGFTYDHIY------GTKI 234
E P+ R E W + R VG N + +Y G +
Sbjct: 119 ---ECLPYFRRA-------ESWIHGEDTYRGGDGPVGTCNGNDMELNPLYQAFIDAGQQA 168
Query: 235 G--------GTIFDRFGRRH-----------TAAELLASANPQKITVLIRATVQKIVFDT 275
G G + FG H + A L + +TV +K++
Sbjct: 169 GYPKTDDYNGYQQEGFGPMHMTVDKGIRASTSNAYLRRAMKRSNLTVRKGVVTRKVLI-- 226
Query: 276 SGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLN 335
K +A+GV E G + Q+ A +EV+LS G++G+PQ+L+LSG+GPKA LE+
Sbjct: 227 --KNKQAIGVEI--EVGGKVQSVYA---NTEVLLSAGSVGSPQLLQLSGIGPKAVLEQAG 279
Query: 336 ISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGV----YIEASSGFG-- 389
I+V D +G+ + D+ ++P+ +L +G+ G+ +I G G
Sbjct: 280 IAVKHDLPGVGENLQDHLEVYFQYACHQPI--TLNSKLGLISKGLIGTRWILQKDGLGAT 337
Query: 390 ---ESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG-GFILE- 444
ES I G+ I Q +P R AF G GF +
Sbjct: 338 NHFESCAFIRSRAGLKWPNI-QYHFLPAAMRYDG-------------QAAFDGHGFQVHV 383
Query: 445 KIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQC 504
P S G + + + + P++ FNY S D + D +R+ +I+ +Y
Sbjct: 384 GPNKPQSRGRIWITSADPHQKPNIEFNYISTEQDKQDWRDCIRLTREILAQPAMDDY--- 440
Query: 505 DQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGK------VV 558
+ E A + ++ ++++ + + V + +H C +G V+
Sbjct: 441 --RGEEIQPGADITSD-----------EAMDAWVRQNVESAYHPSCTCKMGSDNDPMTVL 487
Query: 559 STEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKIL 602
+ + +V GID LRV+D S + P N +M+ IL
Sbjct: 488 NKDCQVRGIDSLRVIDSSVFPTIPNGNLNAPTIMVAEKAADAIL 531
>sp|Q8UH55|BETA_AGRT5 Choline dehydrogenase OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=betA PE=3 SV=2
Length = 549
Score = 114 bits (284), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 142/564 (25%), Positives = 232/564 (41%), Gaps = 84/564 (14%)
Query: 82 DYIVVGGGTAGCPLAATLSQN--FTVLLLERGGV---PFSDVNVSFLQNFHMTLADTSPQ 136
DY++VG G+AG +A LS++ ++V+++E GG PF + + M +
Sbjct: 4 DYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 137 SASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIER---MGWDAKLVNESFPWVE 193
S + + + R +V+GG SSIN Y R ++ R +G + P+ +
Sbjct: 64 SEPEPNLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYADVLPYFK 123
Query: 194 RQIVHQPKQEGWQKALRDSLLDVGVSP-----FNGFTY----------DHIYGTKIGG-- 236
R +EGW+ D L V P F+ F D G+K G
Sbjct: 124 RMEHSHGGEEGWRGT--DGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQEGFG 181
Query: 237 ----TIFDRFGRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDEN 291
TI + GRR +AA L A + L+ +K++ + +AVGV + E
Sbjct: 182 LMEQTIHN--GRRWSAANAYLKPALKRGNVTLVNGFARKVIIENG----RAVGV--EIER 233
Query: 292 GNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMAD 351
+ + A EVI+S + +P++L LSG+GP A L+ + I V D +G + D
Sbjct: 234 RGRVETVKA---NREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQD 290
Query: 352 NPMNAVFVP-SNRPVEQSLIETVGITKLGV----YIEASSGFGESRDSIHCHHGIMSAEI 406
+ M F S +PV SL + GV ++ + G G S C + +
Sbjct: 291 H-MEFYFQQVSTKPV--SLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEAC--AFLRSAP 345
Query: 407 GQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG--GFILEKIASPISTGELSLINTNVDD 464
G P AI K F+ G+ L K S G ++L + + D
Sbjct: 346 GLKQPDIQYHFLPVAIS--YDGKAAAKSHGFQAHVGYNLSK-----SRGNVTLRSADPHD 398
Query: 465 NPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLV 524
+P + FNY SHP D ++ VR+ +I K F ++ + + E I
Sbjct: 399 DPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDFRGPEIQPGENI------------ 446
Query: 525 PKHTNDTKSLEQFCKDTVITIWHYHGGCHVGK------VVSTEYKVLGIDRLRVVDGSTY 578
+ ++ F ++ + + +H G C +G VV E +V+G++ LRV D S +
Sbjct: 447 ----ETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVADSSIF 502
Query: 579 DESPGTNPQGTVLMMGRYMGVKIL 602
N G +M G IL
Sbjct: 503 PHVTYGNLNGPSIMTGEKAADHIL 526
>sp|P54223|BETA_RHIME Choline dehydrogenase OS=Rhizobium meliloti (strain 1021) GN=betA
PE=3 SV=2
Length = 549
Score = 112 bits (280), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 147/570 (25%), Positives = 238/570 (41%), Gaps = 81/570 (14%)
Query: 82 DYIVVGGGTAGCPLAATLSQN--FTVLLLERGGV---PFSDVNVSFLQNFHMTLADTSPQ 136
D++++G G+AG LA LS++ +V++LE GG PF + + M +
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGRNSVIVLEFGGSDVGPFIQMPAALAWPMSMNRYNWGYL 63
Query: 137 SASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIER---MGWDAKLVNESFPWVE 193
S + ++ + R +V+GG SSIN Y R S+ R +G + P+ +
Sbjct: 64 SEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFNRWEELGAQGWAYADVLPYYK 123
Query: 194 RQIVHQPKQEGWQKALRDSLLDVGVSP-----FNGF-----------TYDHIYGTKIGGT 237
R +EGW+ D L V P F+ F T D+ + G
Sbjct: 124 RMEHSHGGEEGWRGT--DGPLHVQRGPVKNPLFHAFIEAGKEAGFEVTEDYNGSKQEGFG 181
Query: 238 IFDRF---GRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGN 293
+ ++ GRR +AA L A + LIR +KIV + +A GV + E G
Sbjct: 182 LMEQTTWRGRRWSAASAYLRPALKRPNVELIRCFARKIVIENG----RATGV--EIERGG 235
Query: 294 QHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNP 353
+ + A EVI+S + +P++L LSG+GP A L+++ I V +D +G+ + D+
Sbjct: 236 RIEVVKA---NREVIVSASSFNSPKLLMLSGIGPAAHLKEMGIDVKVDRPGVGQNLQDH- 291
Query: 354 MNAVFVP-SNRPVEQSLIETVGITKLGV----YIEASSGFGESRDSIHCHHGIMSAEIGQ 408
M F S +PV SL + GV ++ G G S C + + G
Sbjct: 292 MEFYFQQVSTKPV--SLYSWLPWFWQGVAGAQWLFFKRGLGISNQFESC--AFLRSAPGV 347
Query: 409 LSTIPPKQRTPEAIQDYIRNKRTLPHEAFK--GGFILEKIASPISTGELSLINTNVDDNP 466
P AI K F+ G+ L K S G +SL +++ +P
Sbjct: 348 KQPDIQYHFLPVAIS--YDGKAAAKSHGFQVHVGYNLSK-----SRGNVSLRSSDPKADP 400
Query: 467 SVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPK 526
+ FNY SHP D ++ VR+ +I K F Y + + E +
Sbjct: 401 VIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDLYRGPEIQPGEKV-------------- 446
Query: 527 HTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRLRVVDGSTYDE 580
+ ++ F ++ + + +H G C +G VV E +V+G+D LRV D S +
Sbjct: 447 --QTDEEIDGFLREHLESAYHPCGTCKMGAKDDPMAVVDPETRVIGVDGLRVADSSIFPH 504
Query: 581 SPGTNPQGTVLMMGRYMGVKIL-RQRLGKA 609
N +M G IL RQ L ++
Sbjct: 505 ITYGNLNAPSIMTGEKSADHILGRQPLARS 534
>sp|A6U6Y8|BETA_SINMW Choline dehydrogenase OS=Sinorhizobium medicae (strain WSM419)
GN=betA PE=3 SV=1
Length = 549
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 146/570 (25%), Positives = 240/570 (42%), Gaps = 81/570 (14%)
Query: 82 DYIVVGGGTAGCPLAATLSQN--FTVLLLERGGV---PFSDVNVSFLQNFHMTLADTSPQ 136
D++++G G+AG LA LS++ +V++LE GG PF + + M +
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGANSVVVLEFGGSDVGPFIQMPAALAWPMSMNRYNWGYL 63
Query: 137 SASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIER---MGWDAKLVNESFPWVE 193
S + ++ + R +V+GG SSIN Y R S+ +R +G + P+ +
Sbjct: 64 SEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHSEDFDRWEELGAKGWAYADVLPYYK 123
Query: 194 RQIVHQPKQEGWQKALRDSLLDVGVSP-----FNGF-----------TYDHIYGTKIGGT 237
R +EGW+ D L V P F+ F T D+ + G
Sbjct: 124 RMEHSHGGEEGWRGT--DGPLHVQRGPVKNPLFHAFIEAGKQAGFEVTEDYNGSKQEGFG 181
Query: 238 IFDRF---GRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGN 293
+ ++ GRR +AA L A + L+R +KIV + +A GV + E G
Sbjct: 182 LMEQTTWRGRRWSAASAYLRPALKRPNVELVRCFARKIVIENG----RATGV--EIERGG 235
Query: 294 QHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNP 353
+ + A EVI+S + +P++L LSG+GP A L+++ I V D +G+ + D+
Sbjct: 236 RTEVVRA---NREVIVSASSFNSPKLLMLSGIGPAAHLQEMGIDVKADRPGVGQNLQDH- 291
Query: 354 MNAVFVP-SNRPVEQSLIETVGITKLGV----YIEASSGFGESRDSIHCHHGIMSAEIGQ 408
M F S +PV SL + GV ++ G G S C + + G
Sbjct: 292 MEFYFQQVSTKPV--SLYSWLPWFWQGVAGAQWLFFKRGLGISNQFESC--AFLRSAPGV 347
Query: 409 LSTIPPKQRTPEAIQDYIRNKRTLPHEAFK--GGFILEKIASPISTGELSLINTNVDDNP 466
P AI K F+ G+ L K S G+++L +++ +P
Sbjct: 348 KQPDIQYHFLPVAIS--YDGKAAAKSHGFQVHVGYNLSK-----SRGDVTLRSSDPKADP 400
Query: 467 SVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPK 526
+ FNY SHP D ++ VR+ +I K F Y + E VR +
Sbjct: 401 VIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDLY-----RGPEIQPGEKVRTD------ 449
Query: 527 HTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRLRVVDGSTYDE 580
+ ++ F ++ + + +H G C +G VV E +V+G+D LRV D S +
Sbjct: 450 -----EEIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPETRVIGVDGLRVADSSIFPH 504
Query: 581 SPGTNPQGTVLMMGRYMGVKIL-RQRLGKA 609
N +M G IL +Q L ++
Sbjct: 505 ITYGNLNAPSIMTGEKAADHILGKQPLARS 534
>sp|P18173|DHGL_DROME Glucose dehydrogenase [acceptor] OS=Drosophila melanogaster GN=Gld
PE=3 SV=3
Length = 625
Score = 110 bits (275), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 144/621 (23%), Positives = 245/621 (39%), Gaps = 113/621 (18%)
Query: 50 FIKEASSFTSPPPPSSSSFSPRNGDHHHHSAFDYIVVGGGTAGCPLAATLSQ--NFTVLL 107
FI+ P +SS F D+ +D+IV+GGG+AG +A+ LS+ + VLL
Sbjct: 39 FIRSQCDLEDPCGRASSRFRSEP-DYE----YDFIVIGGGSAGSVVASRLSEVPQWKVLL 93
Query: 108 LERGG-VPFSDVNVSFLQNFHMTLAD----TSPQSASQYFISTDGVLNARARVLGGGSSI 162
+E GG P S NF + D T P+ + R +VLGG S +
Sbjct: 94 IEAGGDEPVGAQIPSMFLNFIGSDIDYRYNTEPEPMACLSSMEQRCYWPRGKVLGGTSVL 153
Query: 163 NAGFYTRASSQFIERMGWDAK---LVNESFPWVERQIVHQPKQE-GWQKALRDSLLDVGV 218
N Y R + + + D N+ P+ ++ + E G + + LL VG
Sbjct: 154 NGMMYVRGNREDYDDWAADGNPGWAYNDVLPFFKKSEDNLDLDEVGTEYHAKGGLLPVGK 213
Query: 219 SPFN--------------GFTYDHIYGTKIGGTIFD----RFGRRHTAAE--LLASANPQ 258
P+N GF+ + G G + R G R+++A L +
Sbjct: 214 FPYNPPLSYAILKAGEELGFSVHDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARMRN 273
Query: 259 KITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQ 318
+ +L+ T KI+ K +GV D+ G+ + + K EV+LS GA+ +P
Sbjct: 274 NLHILLNTTATKILIHPHTK--NVLGVEVSDQFGSTRKILV----KKEVVLSAGAVNSPH 327
Query: 319 MLKLSGVGPKAELEKLNISVVLDNAHIGKGMADN---------------PMNAVFVPSNR 363
+L LSGVGPK EL+++N+ V + +GK + ++ P+N
Sbjct: 328 ILLLSGVGPKDELQQVNVRTVHNLPGVGKNLHNHVTYFTNFFIDDADTAPLNWATAMEYL 387
Query: 364 PVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQ 423
L+ GI+ + + R + + G G L++ + E +
Sbjct: 388 LFRDGLMSGTGISDVTAKLATRYADSPERPDLQLYFG------GYLASCARTGQVGELLS 441
Query: 424 DYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCV 483
+ R+ + P + +P S G + L + + + P + NY +H D+K V
Sbjct: 442 NNSRSIQIFP-----------AVLNPRSRGFIGLRSADPLEPPRIVANYLTHEQDVKTLV 490
Query: 484 DGVRMAAKIVQSKHFLNYTQCDQKSV-----------EAILNASVRANVNLVPKHTNDTK 532
+G++ ++ Q+ Y K+V +A +VR N P++
Sbjct: 491 EGIKFVIRLSQTTPLKQYGMRLDKTVVKGCEAHAFGSDAYWECAVRQNTG--PEN----- 543
Query: 533 SLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRLRVVDGSTYDESPGTNP 586
H G C +G VV+ E +V GI LRV+D S + N
Sbjct: 544 --------------HQAGSCKMGPSHDPMAVVNHELRVHGIRGLRVMDTSIMPKVSSGNT 589
Query: 587 QGTVLMMGRYMGVKILRQRLG 607
+M+ G +L++ G
Sbjct: 590 HAPAVMIAE-KGAYLLKRAWG 609
>sp|Q47944|SDH_GLUOY L-sorbose 1-dehydrogenase OS=Gluconobacter oxydans PE=3 SV=1
Length = 531
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 152/576 (26%), Positives = 225/576 (39%), Gaps = 120/576 (20%)
Query: 79 SAFDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGV---PFSDVNVSFLQ---NFHMTL 130
S FDYIVVGGG+AGC LAA LS+N V L+E G P + V F + H
Sbjct: 3 SGFDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTTGPHTWD 62
Query: 131 ADTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERM------GWDAKL 184
T PQ + + + + R+LGGGSSINA +TR +R GW +
Sbjct: 63 LLTEPQKHA----NNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWSFRD 118
Query: 185 VNESFPWVERQIVHQPKQEGWQ---------------KALRDSLLDVGVSPFNGFTYDHI 229
V + F E V G +A S ++G+ P+N D
Sbjct: 119 VQKYFIRSEGNAVFSGTWHGTNGPLGVSNLAEPNPTSRAFVQSCQEMGL-PYNP---DFN 174
Query: 230 YGTKIGGTIFD---RFGRRHTAA--ELLASANPQKITVLIRATVQKIVFDTSGKRPKAVG 284
++ G I+ R RR + A L + + +TV+ RA V KIVF+ G R V
Sbjct: 175 GASQEGAGIYQMTIRNNRRCSTAVGYLRPALGRKNLTVVTRALVLKIVFN--GTRATGVQ 232
Query: 285 VIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAH 344
I NG + A E++++ GAIGTP+++ LSGVGP A L + I VV D
Sbjct: 233 YI---ANGTLNTA----EASQEIVVTAGAIGTPKLMMLSGVGPAAHLRENGIPVVQDLPG 285
Query: 345 IGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSA 404
+G+ + D+ GV I A ES D H ++ A
Sbjct: 286 VGENLQDH-------------------------FGVDIVAELKTDESFDKYRKLHWMLWA 320
Query: 405 -----------------EIGQLSTIPPKQRTPEAIQDYIRNK------RTLPHEAFKGGF 441
E G P P+ ++ ++P A G
Sbjct: 321 GLEYTMFRSGPVASNVVEGGAFWYSDPSSGVPDLQFHFLAEAGAEAGVTSVPKGA-SGIT 379
Query: 442 ILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNY 501
+ + P S G + L + + NP V N+ P DL+ +GVR L+Y
Sbjct: 380 LNSYVLRPKSRGTVRLRSADPRVNPMVDPNFLGDPADLETSAEGVR-----------LSY 428
Query: 502 TQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGK----V 557
Q S+E +R K + + ++ T +H C +G+ V
Sbjct: 429 EMFSQPSLE----KHIRKTCFFSGKQPT-MQMYRDYAREHGRTSYHPTCTCKMGRDDMSV 483
Query: 558 VSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMM 593
V KV G++ +R+ D S G+N +M+
Sbjct: 484 VDPRLKVHGLEGIRICDSSVMPSLLGSNTNAATIMI 519
>sp|Q8G1Z8|BETA_BRUSU Choline dehydrogenase OS=Brucella suis biovar 1 (strain 1330)
GN=betA PE=3 SV=1
Length = 549
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 153/572 (26%), Positives = 237/572 (41%), Gaps = 100/572 (17%)
Query: 82 DYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVN--------VSFLQNFHMTLA 131
D++++G G+AG +A LS+N ++V+++E G VP DV +SF N M
Sbjct: 4 DFVIIGSGSAGSAMAYRLSENGRYSVIVIEYG-VP--DVGPLIQMPAALSFPMN--METY 58
Query: 132 DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERM------GWDAKLV 185
D S + I ++ R +VLGG SSIN Y R + + GW V
Sbjct: 59 DWGFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADV 118
Query: 186 NESFPWVERQIVHQPKQEGW---------QKALRDSLLD---VGVSPFNGFTY-DHIYGT 232
P+ +R Q QEGW Q+ RD+ L V GF D G
Sbjct: 119 ---LPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGE 175
Query: 233 KIGG------TIFDRFGRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGV 285
K G TI + GRR +AA L A + L++ +KIV + GKR AVGV
Sbjct: 176 KQEGFGPMEQTIHN--GRRWSAANAYLKPALKRPNVKLVKGFARKIVLE--GKR--AVGV 229
Query: 286 IFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHI 345
+ E G A + EVI++ +I +P++L LSG+GP A L++ I +V D +
Sbjct: 230 --EIEAGRTFSTIRA---RREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGV 284
Query: 346 GKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFG-----ESRDSIHCH 398
G+ + D+ + +P+ S + ++GV ++ +G G ES +
Sbjct: 285 GQNLQDHLEVYIQQECTQPITLYSELNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSK 344
Query: 399 HGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG--GFILEKIASPISTGELS 456
G+ +I Q +P R K F+ G + K S G ++
Sbjct: 345 AGVEYPDI-QYHFLPVAIR--------YDGKAAAQSHGFQAHVGPMRSK-----SRGSVT 390
Query: 457 LINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNAS 516
L + N + P + FNY SH D VR+ +I F Y A
Sbjct: 391 LRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYR-----------GAE 439
Query: 517 VRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRL 570
++ H ++ F ++ V + +H G C +G VV E +V+G++ L
Sbjct: 440 IQPGA-----HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGL 494
Query: 571 RVVDGSTYDESPGTNPQGTVLMMGRYMGVKIL 602
RV D S + N G +M+G IL
Sbjct: 495 RVADSSIFPRITNGNLNGPSIMVGEKASDHIL 526
>sp|A6X2G7|BETA_OCHA4 Choline dehydrogenase OS=Ochrobactrum anthropi (strain ATCC 49188 /
DSM 6882 / NCTC 12168) GN=betA PE=3 SV=1
Length = 549
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 152/572 (26%), Positives = 239/572 (41%), Gaps = 100/572 (17%)
Query: 82 DYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVN--------VSFLQNFHMTLA 131
D++++G G+AG +A LS++ ++V+++E G VP DV +SF N M
Sbjct: 4 DFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYG-VP--DVGPLIQMPAALSFPMN--METY 58
Query: 132 DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERM------GWDAKLV 185
D + + I ++ R +VLGG SSIN Y R ++ + GW V
Sbjct: 59 DWGFSTEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHARDYDHWSESGARGWAYADV 118
Query: 186 NESFPWVERQIVHQPKQEGW---------QKALRDSLLD---VGVSPFNGFTYDHIY-GT 232
P+ +R QEGW Q+ RD+ L V GF Y G
Sbjct: 119 ---LPYFKRMENSSGGQEGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYNGE 175
Query: 233 KIGG------TIFDRFGRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGV 285
K G TI + GRR +AA L A + L++ +KIV + GKR AVGV
Sbjct: 176 KQEGFGPMEQTIHN--GRRWSAANAYLKPALKRPNVKLVKGLARKIVLE--GKR--AVGV 229
Query: 286 IFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHI 345
+ E G ++F + EVI++ +I +P++L LSG+GP A+L++ I VV D +
Sbjct: 230 --EIEAG---RSFSTIRARREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPGV 284
Query: 346 GKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFG-----ESRDSIHCH 398
G+ + D+ + +P+ S + K+G ++ +G G ES +
Sbjct: 285 GQNLQDHLEVYIQQECTQPITLYSKLNLFSKAKIGAEWLFFKTGDGATNHFESAAFLRSK 344
Query: 399 HGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG--GFILEKIASPISTGELS 456
G+ +I Q +P R K F+ G + K S G ++
Sbjct: 345 AGVEYPDI-QYHFLPVAIR--------YDGKAAAQSHGFQAHVGPMRSK-----SRGSVT 390
Query: 457 LINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNAS 516
L + N + P + FNY SH D VR+ +I F Y A
Sbjct: 391 LRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFNPYR-----------GAE 439
Query: 517 VRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRL 570
++ H ++ F K+ V + +H G C +G VV E +V+G++ L
Sbjct: 440 IQPGA-----HVQSDDEIDNFIKEHVESAFHPCGTCKMGAVDDPMAVVDAECRVIGVEGL 494
Query: 571 RVVDGSTYDESPGTNPQGTVLMMGRYMGVKIL 602
RV D S + N G +M+G IL
Sbjct: 495 RVADSSIFPRITNGNLNGPSIMVGEKASDHIL 526
>sp|B2JS89|BETA_BURP8 Choline dehydrogenase OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=betA PE=3 SV=1
Length = 572
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 148/576 (25%), Positives = 242/576 (42%), Gaps = 104/576 (18%)
Query: 81 FDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLA------- 131
+DYI++G G+AG LA L+++ TVLLLE GG D F LA
Sbjct: 6 YDYIIIGAGSAGNVLATRLTEDRDVTVLLLEAGG---PDYRFDFRTQMPAALAYPLQGRR 62
Query: 132 -DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASS----QFIERMGWDAKLVN 186
+ + ++ + F++ + R + LGG S IN Y R ++ + ER G +
Sbjct: 63 YNWAYETDPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDYDGWAERKGLENWTYL 122
Query: 187 ESFPWVERQ---------------IVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYG 231
+ P+ + VH + L +++++ GV T D
Sbjct: 123 DCLPYFRKAETRDAGANDYHGGDGPVHVTTSKRGVNPLFEAMVEAGVQAGYPRTDDLNGY 182
Query: 232 TKIGGTIFDRF----GRR-HTAAELLASANPQ-KITVLIRATVQKIVFDTSGKRPKAVGV 285
+ G DR GRR TA L A P+ +T++ AT +I+F SGKR A GV
Sbjct: 183 QQEGFGPMDRTVTANGRRASTARGYLDQARPRPNLTIVTYATTDRILF--SGKR--AQGV 238
Query: 286 IFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHI 345
++ D QA + + + EV+L GAI +PQ+L+ SGVGP L L+I VVLD +
Sbjct: 239 VYLD-----GQAQITAHARREVLLCSGAIASPQILQRSGVGPGGWLRDLDIPVVLDLPGV 293
Query: 346 GKGMADNPMNAVFVPSNRPVE--QSLI----ETVGITKL--GVYIEASS-----GFGESR 392
G+ + D+ + PV +L+ +GI + G I AS+ GF +R
Sbjct: 294 GQNLQDHLEMYMQYECKEPVSLYPALLLRNQPAIGIEWMLKGTGIGASNHFEAGGFIRTR 353
Query: 393 DS---IHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASP 449
D + + + I T K Q ++ + R SP
Sbjct: 354 DDDPWPNIQYHFLPVAINYNGTNAIKM---HGFQAHVGSMR-----------------SP 393
Query: 450 ISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSV 509
S G + L + + ++PS+ FNY + LD + D +R+ +I+ ++ L+ + + S
Sbjct: 394 -SRGRVKLRSRDPREHPSILFNYMAEALDWREFRDAIRITREII-AQPALDRFRGRELSP 451
Query: 510 EAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYKVL 565
A L + + ++ F + T +H C +G VV E +V
Sbjct: 452 GAELQSDAQ---------------IDAFVRARAETAYHPSCSCAMGYDDMAVVDGEGRVH 496
Query: 566 GIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKI 601
G++ LRVVD S N +M+ + +I
Sbjct: 497 GLEGLRVVDASIMPRITTGNLNAPTIMLAEKIADRI 532
>sp|Q00593|ALKJ_PSEOL Alcohol dehydrogenase [acceptor] OS=Pseudomonas oleovorans GN=alkJ
PE=1 SV=1
Length = 558
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 150/573 (26%), Positives = 236/573 (41%), Gaps = 95/573 (16%)
Query: 81 FDYIVVGGGTAGCPLAATLSQNFT--VLLLERGGVPFSDVNVSFLQNFHMTLADTSP--- 135
+DYI+VG G+AGC LA LS + + V LLE G D N + L S
Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGP---RDTNPLIHMPLGIALLSNSKKLN 58
Query: 136 ---QSASQYFISTDGVLNARARVLGGGSSINAGFYTR-------ASSQFIER-MGWDAKL 184
Q+A Q ++ + R + LGG SSINA Y R A Q R GW L
Sbjct: 59 WAFQTAPQQNLNGRSLFWPRGKTLGGSSSINAMVYIRGHEDDYHAWEQAAGRYWGWYRAL 118
Query: 185 VNESFPWVE-RQIVHQPKQEG-----------WQKALRDSLLDVGVSP---FNGFTYDHI 229
E F +E Q + + G + L + + G+ FNG ++
Sbjct: 119 --ELFKRLECNQRFDKSEHHGVDGELAVSDLKYINPLSKAFVQAGMEANINFNG-DFNGE 175
Query: 230 YGTKIG-GTIFDRFGRRHTAAE--LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVI 286
Y +G + + G+R ++A L + + ++ A KI+F+ KAVGV
Sbjct: 176 YQDGVGFYQVTQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFEDR----KAVGVS 231
Query: 287 FKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIG 346
+ +N + +G EV+LS GA+GTP +L LSGVG AEL++ +S+V D +G
Sbjct: 232 YIKKNMHHQVKTTSG---GEVLLSLGAVGTPHLLMLSGVGAAAELKEHGVSLVHDLPEVG 288
Query: 347 KGMADNPMNAVFVPSN--RPVEQSL-IETVGITKLGVYIEASSGFGESRDSIHCHHGIMS 403
K + D+ + +N P+ +L G++ L Y+ GF S
Sbjct: 289 KNLQDHLDITLMCAANSREPIGVALSFIPRGVSGLFSYVFKREGFLTSN----------V 338
Query: 404 AEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGF-----ILEKIASPISTGELSLI 458
AE G P + P ++ GG+ I + + P S G + L
Sbjct: 339 AESGGFVKSSPDRDRPNLQFHFLPTYLKDHGRKIAGGYGYTLHICDLL--PKSRGRIGLK 396
Query: 459 NTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQ----SKHFLNYTQCDQKSVEAILN 514
+ N P + NY S D+K + G+++ I+Q +KHF + E +
Sbjct: 397 SANPLQPPLIDPNYLSDHEDIKTMIAGIKIGRAILQAPSMAKHFKH---------EVVPG 447
Query: 515 ASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGK----VVSTEYKVLGIDRL 570
+V+ + ++ D + + TI+H G C +GK VV K+ G+ +
Sbjct: 448 QAVKTDDEII----EDIRRRAE-------TIYHPVGTCRMGKDPASVVDPCLKIRGLANI 496
Query: 571 RVVDGSTYDESPGTNPQGTVLMMGRYMGVKILR 603
RVVD S N +M+ I+R
Sbjct: 497 RVVDASIMPHLVAGNTNAPTIMIAENAAEIIMR 529
>sp|B0CKN4|BETA_BRUSI Choline dehydrogenase OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=betA PE=3 SV=1
Length = 549
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 152/572 (26%), Positives = 237/572 (41%), Gaps = 100/572 (17%)
Query: 82 DYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVN--------VSFLQNFHMTLA 131
D++++G G+AG +A LS++ ++V+++E G VP DV +SF N M
Sbjct: 4 DFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYG-VP--DVGPLIQMPAALSFPMN--METY 58
Query: 132 DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERM------GWDAKLV 185
D S + I ++ R +VLGG SSIN Y R + + GW V
Sbjct: 59 DWGFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADV 118
Query: 186 NESFPWVERQIVHQPKQEGW---------QKALRDSLLD---VGVSPFNGFTYDHIY-GT 232
P+ +R Q QEGW Q+ RD+ L V GF Y G
Sbjct: 119 ---LPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGE 175
Query: 233 KIGG------TIFDRFGRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGV 285
K G TI + GRR +AA L A + L++ +KIV + GKR AVGV
Sbjct: 176 KQEGFGPMEQTIHN--GRRWSAANAYLKPALKRPNVKLVKGFARKIVLE--GKR--AVGV 229
Query: 286 IFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHI 345
+ E G A + EVI++ +I +P++L LSG+GP A L++ I +V D +
Sbjct: 230 --EIEAGRTFSTIRA---RREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGV 284
Query: 346 GKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFG-----ESRDSIHCH 398
G+ + D+ + +P+ S + ++GV ++ +G G ES +
Sbjct: 285 GQNLQDHLEVYIQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSK 344
Query: 399 HGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG--GFILEKIASPISTGELS 456
G+ +I Q +P R K F+ G + K S G ++
Sbjct: 345 AGVEYPDI-QYHFLPVAIR--------YDGKAAAQSHGFQAHVGPMRSK-----SRGSVT 390
Query: 457 LINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNAS 516
L + N + P + FNY SH D VR+ +I F Y A
Sbjct: 391 LRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYR-----------GAE 439
Query: 517 VRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRL 570
++ H ++ F ++ V + +H G C +G VV E +V+G++ L
Sbjct: 440 IQPGA-----HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGL 494
Query: 571 RVVDGSTYDESPGTNPQGTVLMMGRYMGVKIL 602
RV D S + N G +M+G IL
Sbjct: 495 RVADSSIFPRITNGNLNGPSIMVGEKASDHIL 526
>sp|A5VPA6|BETA_BRUO2 Choline dehydrogenase OS=Brucella ovis (strain ATCC 25840 / 63/290
/ NCTC 10512) GN=betA PE=3 SV=1
Length = 549
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 152/572 (26%), Positives = 237/572 (41%), Gaps = 100/572 (17%)
Query: 82 DYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVN--------VSFLQNFHMTLA 131
D++++G G+AG +A LS++ ++V+++E G VP DV +SF N M
Sbjct: 4 DFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYG-VP--DVGPLIQMPAALSFPMN--METY 58
Query: 132 DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERM------GWDAKLV 185
D S + I ++ R +VLGG SSIN Y R + + GW V
Sbjct: 59 DWGFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADV 118
Query: 186 NESFPWVERQIVHQPKQEGW---------QKALRDSLLD---VGVSPFNGFTYDHIY-GT 232
P+ +R Q QEGW Q+ RD+ L V GF Y G
Sbjct: 119 ---LPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGE 175
Query: 233 KIGG------TIFDRFGRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGV 285
K G TI + GRR +AA L A + L++ +KIV + GKR AVGV
Sbjct: 176 KQEGFGPMEQTIHN--GRRWSAANAYLKPALKRPNVKLVKGFARKIVLE--GKR--AVGV 229
Query: 286 IFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHI 345
+ E G A + EVI++ +I +P++L LSG+GP A L++ I +V D +
Sbjct: 230 --EIEAGRTFSTIRA---RREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGV 284
Query: 346 GKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFG-----ESRDSIHCH 398
G+ + D+ + +P+ S + ++GV ++ +G G ES +
Sbjct: 285 GQNLQDHLEVYIQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSK 344
Query: 399 HGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG--GFILEKIASPISTGELS 456
G+ +I Q +P R K F+ G + K S G ++
Sbjct: 345 AGVEYPDI-QYHFLPVAIR--------YDGKAAAQSHGFQAHVGPMRSK-----SRGSVT 390
Query: 457 LINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNAS 516
L + N + P + FNY SH D VR+ +I F Y A
Sbjct: 391 LRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYR-----------GAE 439
Query: 517 VRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRL 570
++ H ++ F ++ V + +H G C +G VV E +V+G++ L
Sbjct: 440 IQPGA-----HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGL 494
Query: 571 RVVDGSTYDESPGTNPQGTVLMMGRYMGVKIL 602
RV D S + N G +M+G IL
Sbjct: 495 RVADSSIFPRITNGNLNGPSIMVGEKASDHIL 526
>sp|A9M9H8|BETA_BRUC2 Choline dehydrogenase OS=Brucella canis (strain ATCC 23365 / NCTC
10854) GN=betA PE=3 SV=1
Length = 549
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 152/572 (26%), Positives = 237/572 (41%), Gaps = 100/572 (17%)
Query: 82 DYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVN--------VSFLQNFHMTLA 131
D++++G G+AG +A LS++ ++V+++E G VP DV +SF N M
Sbjct: 4 DFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYG-VP--DVGPLIQMPAALSFPMN--METY 58
Query: 132 DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERM------GWDAKLV 185
D S + I ++ R +VLGG SSIN Y R + + GW V
Sbjct: 59 DWGFSSEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADV 118
Query: 186 NESFPWVERQIVHQPKQEGW---------QKALRDSLLD---VGVSPFNGFTY-DHIYGT 232
P+ +R Q QEGW Q+ RD+ L V GF D G
Sbjct: 119 ---LPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVADDYNGE 175
Query: 233 KIGG------TIFDRFGRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGV 285
K G TI + GRR +AA L A + L++ +KIV + GKR AVGV
Sbjct: 176 KQEGFGPMEQTIHN--GRRWSAANAYLKPALKRPNVKLVKGFARKIVLE--GKR--AVGV 229
Query: 286 IFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHI 345
+ E G A + EVI++ +I +P++L LSG+GP A L++ I +V D +
Sbjct: 230 --EIEAGRTFSTIRA---RREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGV 284
Query: 346 GKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFG-----ESRDSIHCH 398
G+ + D+ + +P+ S + ++GV ++ +G G ES +
Sbjct: 285 GQNLQDHLEVYIQQECTQPITLYSELNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSK 344
Query: 399 HGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG--GFILEKIASPISTGELS 456
G+ +I Q +P R K F+ G + K S G ++
Sbjct: 345 AGVEYPDI-QYHFLPVAIR--------YDGKAAAQSHGFQAHVGPMRSK-----SRGSVT 390
Query: 457 LINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNAS 516
L + N + P + FNY SH D VR+ +I F Y A
Sbjct: 391 LRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYR-----------GAE 439
Query: 517 VRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRL 570
++ H ++ F ++ V + +H G C +G VV E +V+G++ L
Sbjct: 440 IQPGA-----HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGL 494
Query: 571 RVVDGSTYDESPGTNPQGTVLMMGRYMGVKIL 602
RV D S + N G +M+G IL
Sbjct: 495 RVADSSIFPRITNGNLNGPSIMVGEKASDHIL 526
>sp|Q8YFY2|BETA_BRUME Choline dehydrogenase OS=Brucella melitensis biotype 1 (strain 16M
/ ATCC 23456 / NCTC 10094) GN=betA PE=3 SV=2
Length = 549
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 152/572 (26%), Positives = 237/572 (41%), Gaps = 100/572 (17%)
Query: 82 DYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVN--------VSFLQNFHMTLA 131
D++++G G+AG +A LS++ ++V+++E G VP DV +SF N M
Sbjct: 4 DFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYG-VP--DVGPLIQMPAALSFPMN--METY 58
Query: 132 DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERM------GWDAKLV 185
D S + I ++ R +VLGG SSIN Y R + + GW V
Sbjct: 59 DWGFSSEPEPHIRGRSLVTPRGKVLGGSSSINGMVYVRGHACDFDHWSQSGARGWAYADV 118
Query: 186 NESFPWVERQIVHQPKQEGW---------QKALRDSLLD---VGVSPFNGFTYDHIY-GT 232
P+ +R Q QEGW Q+ RD+ L V GF Y G
Sbjct: 119 ---LPYFKRMENSQGGQEGWRGTNGPLYVQRGKRDNPLFHAFVEAGHQAGFEVTDDYNGE 175
Query: 233 KIGG------TIFDRFGRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGV 285
K G TI + GRR +AA L A + L++ +KIV + GKR AVGV
Sbjct: 176 KQEGFGPMEQTIHN--GRRWSAANAYLKPALKRPNVKLVKGFARKIVLE--GKR--AVGV 229
Query: 286 IFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHI 345
+ E G A + EVI++ +I +P++L LSG+GP A L++ I +V D +
Sbjct: 230 --EIEAGRTFSTIRA---RREVIIAASSINSPKLLMLSGIGPAAHLKEHGIDLVADRPGV 284
Query: 346 GKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFG-----ESRDSIHCH 398
G+ + D+ + +P+ S + ++GV ++ +G G ES +
Sbjct: 285 GQNLQDHLEVYIQQECTQPITLYSKLNLFSKARIGVEWLLFKTGDGATNHFESAAFVRSK 344
Query: 399 HGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG--GFILEKIASPISTGELS 456
G+ +I Q +P R K F+ G + K S G ++
Sbjct: 345 AGVEYPDI-QYHFLPVAIR--------YDGKAAAQSHGFQAHVGPMRSK-----SRGSVT 390
Query: 457 LINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNAS 516
L + N + P + FNY SH D VR+ +I F Y A
Sbjct: 391 LRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFDPYR-----------GAE 439
Query: 517 VRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRL 570
++ H ++ F ++ V + +H G C +G VV E +V+G++ L
Sbjct: 440 IQPGA-----HVQTDDEIDNFIREHVESAFHPCGTCKMGAVDDPMAVVDPECRVIGVEGL 494
Query: 571 RVVDGSTYDESPGTNPQGTVLMMGRYMGVKIL 602
RV D S + N G +M+G IL
Sbjct: 495 RVADSSIFPRITNGNLNGPSIMVGEKASGHIL 526
>sp|Q8BJ64|CHDH_MOUSE Choline dehydrogenase, mitochondrial OS=Mus musculus GN=Chdh PE=1
SV=1
Length = 596
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 143/565 (25%), Positives = 233/565 (41%), Gaps = 91/565 (16%)
Query: 60 PPPPSSSSFSPRNGDHHHHSAFDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSD 117
P PP S + + D + ++VVG G+AGC LA+ L++ N VLLLE G
Sbjct: 27 PCPPCSRAVASVGKDE-----YTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLM 81
Query: 118 VNVSFLQNFHMTLADTSPQSASQY--FISTDG--------VLNARARVLGGGSSINAGFY 167
+ HM A S +Y + T+ + R RV GG SS+NA Y
Sbjct: 82 GSKRLQWKIHMPAALVSNLCDDKYNWYYHTEPQPGMDSRVLYWPRGRVWGGSSSLNAMVY 141
Query: 168 TRASSQFIERM------GWDAKLVNESFPWVERQIVHQPKQEGWQ--------------K 207
R ++ R GWD P+ + H+ ++
Sbjct: 142 IRGHAEDYNRWHREGAEGWD---YAHCLPYFRKAQRHELGANMYRGGDGPLHVSRGKTNH 198
Query: 208 ALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFD---RFGRRHTAAELLASANPQKITVLI 264
L + L FT D + G D G+R + A A +P +
Sbjct: 199 PLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTVHQGKRWSTA--CAYLHPVLSRPNL 256
Query: 265 RATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSG 324
RA VQ +V + +AVGV + ++G +H+A+++ EVILS GAI +PQ+L LSG
Sbjct: 257 RAEVQTLVSRVLFEGTRAVGVEYI-KDGQRHKAYVS----REVILSGGAINSPQLLMLSG 311
Query: 325 VGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPV-----EQSLIE-TVGITKL 378
VG +L KL+I VV +G+ + D+ V +P+ ++ L + +G+ L
Sbjct: 312 VGNADDLRKLDIPVVCHLPGVGQNLQDHLEVYVQQACTQPITLHSAQKPLRKVCIGLEWL 371
Query: 379 GVYI-EASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAF 437
Y + ++ E+ I G+ +I Q +P + + D+ ++ EA+
Sbjct: 372 WSYTGDGATAHLETGGFIRSRPGVPHPDI-QFHFLPSQ------VIDH--GRKPTQQEAY 422
Query: 438 KGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKH 497
+ + S G L L + N D+P + NY S D++ VR++ +I
Sbjct: 423 Q---VHVGTMRATSVGWLKLRSANPRDHPVIHPNYLSTETDVEDFRQCVRLSREIF---- 475
Query: 498 FLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGK- 556
+ EA+ A R H K ++ F + + +H C +G+
Sbjct: 476 ----------AQEAL--APFRGKELQPGSHVQSDKEIDAFVRAKADSAYHPSCTCKMGRS 523
Query: 557 -----VVSTEYKVLGIDRLRVVDGS 576
VV + KV+G++ LRVVD S
Sbjct: 524 SDPTAVVDAQTKVIGVENLRVVDAS 548
>sp|Q2KB43|BETA_RHIEC Choline dehydrogenase OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=betA PE=3 SV=1
Length = 549
Score = 106 bits (264), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 143/572 (25%), Positives = 234/572 (40%), Gaps = 85/572 (14%)
Query: 82 DYIVVGGGTAGCPLAATLSQNF--TVLLLERGGV---PFSDVNVSFLQNFHMTLADTSPQ 136
D++++G G+AG LA LS++ +VL++E GG PF + + M +
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 137 SASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIER---MGWDAKLVNESFPWVE 193
S + ++ + R +V+GG SSIN Y R ++ R +G + P+ +
Sbjct: 64 SEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFK 123
Query: 194 RQIVHQPKQEGWQKALRDSLLDVGVSPFN--------------GFTYDHIY-GTKIGG-- 236
R +EGW+ D L V F GF Y G+K G
Sbjct: 124 RMEHSHGGEEGWRGT--DGPLHVQRGGFTNPLFRAFIEAGKQAGFETTEDYNGSKQEGFG 181
Query: 237 ----TIFDRFGRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDEN 291
TIF GRR +AA L A + ++ ++IV + +A GV + E
Sbjct: 182 LMEQTIFA--GRRWSAANAYLKPALKRDNVGIVYGLARRIVIENG----RATGV--EIER 233
Query: 292 GNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMAD 351
G + + A EVI+S + +P++L LSG+GP L+++ I V D +G + D
Sbjct: 234 GGRTEVVKA---NREVIVSASSFNSPKLLMLSGIGPAKHLKEMGIEVKADRPGVGANLQD 290
Query: 352 NPMNAVFVP-SNRPVEQSLIETVGITKLGV----YIEASSGFGESRDSIHCHHGIMSAEI 406
+ M F S +PV SL + GV ++ + G G S C + +
Sbjct: 291 H-MEFYFQQVSTKPV--SLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEAC--AFLRSAP 345
Query: 407 GQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFK--GGFILEKIASPISTGELSLINTNVDD 464
G P AI K F+ G+ L K S G ++L + +
Sbjct: 346 GLKQPDIQYHFLPVAIS--YDGKAAAKSHGFQVHVGYNLSK-----SRGSVTLRSPDPKA 398
Query: 465 NPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLV 524
+P + FNY SHP D ++ VR+ +I K F Y + + E +
Sbjct: 399 DPVLRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDAYRGPEIQPGEGV------------ 446
Query: 525 PKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRLRVVDGSTY 578
+ ++ F ++ + + +H G C +G VV + +V+G+D LRV D S +
Sbjct: 447 ----QSDEQIDSFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLRVADSSIF 502
Query: 579 DESPGTNPQGTVLMMGRYMGVKIL-RQRLGKA 609
N G +M G IL +Q L ++
Sbjct: 503 PHVTYGNLNGPSIMTGEKAADHILGKQPLARS 534
>sp|B3PTE0|BETA_RHIE6 Choline dehydrogenase OS=Rhizobium etli (strain CIAT 652) GN=betA
PE=3 SV=1
Length = 549
Score = 106 bits (264), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 145/572 (25%), Positives = 233/572 (40%), Gaps = 85/572 (14%)
Query: 82 DYIVVGGGTAGCPLAATLSQNF--TVLLLERGGV---PFSDVNVSFLQNFHMTLADTSPQ 136
D++++G G+AG LA LS++ +VL++E GG PF + + M +
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 137 SASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIER---MGWDAKLVNESFPWVE 193
S + ++ + R +V+GG SSIN Y R ++ R +G + P+ +
Sbjct: 64 SEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFK 123
Query: 194 RQIVHQPKQEGWQKALRDSLLDVGVSPFN--------------GF-TYDHIYGTKIGG-- 236
R +EGW+ D L V F GF T D G+K G
Sbjct: 124 RMEHSHGGEEGWRGT--DGPLHVQRGGFTNPLFRAFIEAGKQAGFETTDDYNGSKQEGFG 181
Query: 237 ----TIFDRFGRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDEN 291
TIF GRR +AA L A +K ++ +KIV + +A GV + E
Sbjct: 182 LMEQTIFS--GRRWSAANAYLKPALKRKNVGMVYGLARKIVIEDG----RATGV--EIER 233
Query: 292 GNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMAD 351
G + + A EVI+S + +P++L LSG+GP L + I+V D +G + D
Sbjct: 234 GGKVEVVKA---TREVIVSASSFNSPKLLMLSGIGPGQHLNDMGIAVKADRPGVGANLQD 290
Query: 352 NPMNAVFVP-SNRPVEQSLIETVGITKLGV----YIEASSGFGESRDSIHCHHGIMSAEI 406
+ M F S +PV SL + GV ++ + G G S C + +
Sbjct: 291 H-MEFYFQQVSTKPV--SLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEAC--AFLRSAP 345
Query: 407 GQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFK--GGFILEKIASPISTGELSLINTNVDD 464
G P AI K F+ G+ L K S G ++L + +
Sbjct: 346 GLKQPDIQYHFLPVAIS--YDGKAAAKSHGFQVHVGYNLSK-----SRGSVTLRSPDPKA 398
Query: 465 NPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLV 524
P + FNY SHP D ++ VR+ +I F Y + + E +
Sbjct: 399 EPVLRFNYMSHPEDWEKFRHCVRLTREIFGQTAFDAYRGPEIQPGEGV------------ 446
Query: 525 PKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRLRVVDGSTY 578
+ ++ F ++ + + +H G C +G VV + +V+G+D LRV D S +
Sbjct: 447 ----QSDEQIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLRVADSSIF 502
Query: 579 DESPGTNPQGTVLMMGRYMGVKIL-RQRLGKA 609
N G +M G IL +Q L ++
Sbjct: 503 PHVTYGNLNGPSIMTGEKAADHILGKQPLARS 534
>sp|P18172|DHGL_DROPS Glucose dehydrogenase [acceptor] OS=Drosophila pseudoobscura
pseudoobscura GN=Gld PE=3 SV=4
Length = 625
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 147/623 (23%), Positives = 246/623 (39%), Gaps = 117/623 (18%)
Query: 50 FIKEASSFTSPPPPSSSSFSPRNGDHHHHSAFDYIVVGGGTAGCPLAATLSQ--NFTVLL 107
FI+ P +S+ F D+ +D+IV+GGG+AG +A+ LS+ + VLL
Sbjct: 39 FIRSQCDLEDPCGRASTRFRSEP-DYE----YDFIVIGGGSAGSVVASRLSEVPQWKVLL 93
Query: 108 LERGG-VPFSDVNVSFLQNFHMTLAD----TSPQSASQYFISTDGVLNARARVLGGGSSI 162
+E GG P S NF + D T P+ + R +VLGG S +
Sbjct: 94 IEAGGDEPVGAQIPSMFLNFIGSDIDYRYNTEPERMACLSSMEQRCYWPRGKVLGGTSVM 153
Query: 163 NAGFYTRASSQFIERM------GWDAKLVNESFPWVERQIVHQPKQEGWQKALRDSLLDV 216
N Y R + + + GW + V F E + + G + + LL V
Sbjct: 154 NGMMYIRGNREDYDDWAAQGNPGWSYQDVLPFFKKSEDNL--ELDAVGTEYHAKGGLLPV 211
Query: 217 GVSPFN--------------GFTYDHIYGTKIGGTIFD----RFGRRHTAAE--LLASAN 256
G P+N GF+ + G G + R G R+++A L +
Sbjct: 212 GKFPYNPPLSYALLKAGEEMGFSVQDLNGQNSTGFMIAQMTARNGIRYSSARAFLRPARM 271
Query: 257 PQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGT 316
+ +L+ TV K++ K VGV D+ G+ + + K EVI+S GA+ +
Sbjct: 272 RNNLHILLNTTVTKVLIHPGTK--NVVGVEVSDQFGSMRKILV----KKEVIVSGGAVNS 325
Query: 317 PQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADN---------------PMNAVFVPS 361
PQ+L LSGVGPK +L+K+N+ V +GK + ++ P+N
Sbjct: 326 PQILLLSGVGPKEDLQKVNVRPVHHLPGVGKNLHNHVAYFTNFFIDDADTAPLNWATAME 385
Query: 362 NRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEA 421
L+ GI+ + + + + + G G L++ RT +
Sbjct: 386 YLLFRDGLMSGTGISDVTAKMATRWADRPNLPDLQLYFG------GYLASC---ARTGQV 436
Query: 422 IQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKR 481
+ N R + I + +P S G ++L + + D P + NY + D+K
Sbjct: 437 GELLSNNSRAIQ--------IFPAVLNPKSRGYITLRSADPLDPPRIFANYLTDERDVKT 488
Query: 482 CVDGVRMAAKIVQSKHFLNYTQCDQKSV-----------EAILNASVRANVNLVPKHTND 530
V+G++ A ++ Q+ Y K+V +A +VR N P++
Sbjct: 489 LVEGIKFAIRLSQTSPLKQYGMRLDKTVVKGCESHAFASDAYWECAVRQNTG--PEN--- 543
Query: 531 TKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRLRVVDGSTYDESPGT 584
H G C +G VV+ E +V G+ LRV+D S +
Sbjct: 544 ----------------HQAGSCKMGPSHDPMAVVNHELRVHGVRGLRVMDTSIMPKVTAG 587
Query: 585 NPQGTVLMMGRYMGVKILRQRLG 607
N +M+ G +L++ G
Sbjct: 588 NTHAPAVMIAE-KGAYLLKRAWG 609
>sp|Q985M5|BETA_RHILO Choline dehydrogenase OS=Rhizobium loti (strain MAFF303099) GN=betA
PE=3 SV=1
Length = 550
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 127/565 (22%), Positives = 227/565 (40%), Gaps = 86/565 (15%)
Query: 82 DYIVVGGGTAGCPLAATLSQN--FTVLLLERGGV---PFSDVNVSFLQNFHMTLADTSPQ 136
D++++G G+AG +A LS++ +V+++E GG P + + +M+L D
Sbjct: 5 DFVIIGSGSAGSAMAYRLSEDGKHSVIVIEFGGSDIGPLIQMPSALSIPLNMSLYDWGFA 64
Query: 137 SASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERM------GWDAKLVNESFP 190
S + + + R +V+GG SSIN Y R ++ + GW V P
Sbjct: 65 SEPEPHLGGRVLATPRGKVIGGSSSINGMVYVRGHARDFDHWAEEGATGWGFADV---LP 121
Query: 191 WVERQIVHQPKQEGW--------------QKALRDSLLDVGVSPFNGFTYDHIYGTKIGG 236
+ +R + ++GW + L + ++ G T D+ + G
Sbjct: 122 YFKRMEDNDGGEDGWRGHGGPLHVQRGSRKNPLYGAFVEAGRQAGFELTDDYNGSKQEGF 181
Query: 237 TIFDRF---GRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENG 292
++ GRR +AA L A +K L++ ++++ + +A+GV +
Sbjct: 182 GPMEQTISGGRRWSAASAYLKPALKRKNVSLVKGFARRVIIENQ----RAIGVEIE---- 233
Query: 293 NQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADN 352
H+ + EVI++ +I +P++L LSG+GP L + I+VV D +G+ + D+
Sbjct: 234 -AHKQIQVVKARREVIVAASSINSPKILMLSGIGPAEHLRENGIAVVADRPGVGRNLQDH 292
Query: 353 PMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFG-----ESRDSIHCHHGIMSAE 405
+ S +P+ S++ +G ++ SG G E+ + G+ +
Sbjct: 293 MELYIQQESTKPITLNSVLNPFSKALIGAQWLFFKSGLGATNHFEAAAFVRSRAGVDYPD 352
Query: 406 IGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKG--GFILEKIASPISTGELSLINTNVD 463
I Q IP R K F+ G + K S G ++L + +
Sbjct: 353 I-QYHFIPAAVR--------YDGKAAAKSHGFQAHVGPMRSK-----SRGSVTLRSPDPK 398
Query: 464 DNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNL 523
P + FNY SHP D +R+ +I Q + +A +
Sbjct: 399 AKPVIRFNYMSHPDDWTEFRHCIRLTREIF-----------GQSAFDAFRGQEISPG--- 444
Query: 524 VPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGK------VVSTEYKVLGIDRLRVVDGST 577
H L+ F +D + +H G C +G+ VV E +V+G+D LRV D S
Sbjct: 445 --SHVQSDDDLDVFIRDHAESAYHPCGTCKMGRADDVTSVVDPECRVIGVDGLRVADSSI 502
Query: 578 YDESPGTNPQGTVLMMGRYMGVKIL 602
+ N +M G IL
Sbjct: 503 FPRVTNGNLNAPSIMTGEKASDHIL 527
>sp|B5ZUG2|BETA_RHILW Choline dehydrogenase OS=Rhizobium leguminosarum bv. trifolii
(strain WSM2304) GN=betA PE=3 SV=1
Length = 549
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 142/572 (24%), Positives = 235/572 (41%), Gaps = 85/572 (14%)
Query: 82 DYIVVGGGTAGCPLAATLSQNF--TVLLLERGGV---PFSDVNVSFLQNFHMTLADTSPQ 136
D++++G G+AG LA LS++ +VL++E GG PF + + M +
Sbjct: 4 DFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 137 SASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFI---ERMGWDAKLVNESFPWVE 193
S + ++ + R +V+GG SSIN Y R ++ E +G + P+ +
Sbjct: 64 SEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAGGWAYADVLPYFK 123
Query: 194 RQIVHQPKQEGWQKALRDSLLDVGVSPFN--------------GFTYDHIY-GTKIGG-- 236
R +EGW+ D L V F GF Y G+K G
Sbjct: 124 RMEHSHGGEEGWRGT--DGPLHVQRGGFTNPLFRAFVEAGKQAGFETTEDYNGSKQEGFG 181
Query: 237 ----TIFDRFGRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDEN 291
TIF GRR +AA L A +K +I Q+IV + +A GV + E
Sbjct: 182 LMEQTIFS--GRRWSAANAYLKPALKRKNVEIIYGFAQRIVIEDG----RATGV--EIER 233
Query: 292 GNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMAD 351
G + + A EVI+S + +P++L LSG+GP L+++ I V D +G + D
Sbjct: 234 GGKIEVVKA---NREVIVSASSFNSPKLLMLSGIGPGEHLKEMGIEVKADRPGVGANLQD 290
Query: 352 NPMNAVFVP-SNRPVEQSLIETVGITKLGV----YIEASSGFGESRDSIHCHHGIMSAEI 406
+ M F S +PV SL + GV ++ + G G S C + +
Sbjct: 291 H-MEFYFQQVSTKPV--SLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEAC--AFLRSAP 345
Query: 407 GQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFK--GGFILEKIASPISTGELSLINTNVDD 464
G P AI K F+ G+ L K S G ++L + +
Sbjct: 346 GLKQPDIQYHFLPVAIS--YDGKAAAKSHGFQVHVGYNLSK-----SRGSVTLRSPDPKA 398
Query: 465 NPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLV 524
+P + FNY SH D ++ VR+ ++ F +Y + + E++
Sbjct: 399 DPVLRFNYMSHAEDWEKFRHCVRLTRELFGQAAFDDYRGAEIQPGESV------------ 446
Query: 525 PKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRLRVVDGSTY 578
+ ++ F ++ + + +H G C +G VV + +V+G++ LRV D S +
Sbjct: 447 ----QSDEEIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVEALRVADSSIF 502
Query: 579 DESPGTNPQGTVLMMGRYMGVKIL-RQRLGKA 609
N G +M G IL +Q L ++
Sbjct: 503 PHVTYGNLNGPSIMTGEKAADHILGKQPLARS 534
>sp|Q48CM7|BETA_PSE14 Choline dehydrogenase OS=Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6) GN=betA PE=3 SV=1
Length = 568
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 137/544 (25%), Positives = 232/544 (42%), Gaps = 82/544 (15%)
Query: 78 HSAFDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLA---- 131
S +DYI++G G+AG LAA L+++ TVLLLE GG D + F LA
Sbjct: 4 QSEYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGG---PDYRLDFRTQMPAALAFPLQ 60
Query: 132 ----DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNE 187
+ + ++ + ++ + R + LGG S IN Y R ++ ++ GW + E
Sbjct: 61 GRRYNWAYETEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNA--MDYDGWAKEPGLE 118
Query: 188 SFPWVE----------RQI-----------VHQPKQEGWQKALRDSLLDVGVSPFNGFTY 226
+ +++ R I V K + L ++++ GV T
Sbjct: 119 DWSYLDCLPYFRKAETRDIGPNDYHGGEGPVSVTKPKAGNNPLFHAMVEAGVQAGFPRTD 178
Query: 227 DHIYGTKIGGTIFDRF----GRRHTAAE--LLASANPQKITVLIRATVQKIVFDTSGKRP 280
D + G DR GRR + A L + +T++ A +I+F+ GKR
Sbjct: 179 DLNGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFE--GKRA 236
Query: 281 KAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVL 340
V + D + + + EV+L GAI +PQ+L+ SGVGP L KL+I VV
Sbjct: 237 VGVAYLVGDSDTR-----IQARARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPVVH 291
Query: 341 DNAHIGKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFGESRDSIHCH 398
D +G+ + D+ + +PV ++ +G ++ +G G S +
Sbjct: 292 DLPGVGQNLQDHLEMYLQYACTQPVSLYPSLKWWNQPAIGAKWMFLGTGIGAS-NQFEAG 350
Query: 399 HGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFI--LEKIASPISTGELS 456
I S+E + I P AI +Y K H GF + + SP S G +
Sbjct: 351 GFIRSSEAFEWPNI-QYHFLPVAI-NYNGTKGVQEH-----GFQAHVGSMRSP-SRGRVQ 402
Query: 457 LINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNAS 516
+ + + + PS+ FNY S D + DG+R+ +I+Q Q +++
Sbjct: 403 VKSKDPREYPSILFNYMSSEQDWQEFRDGIRLTREIMQ-----------QPALDPYRGRE 451
Query: 517 VRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYKVLGIDRLRV 572
+ +++ ++L+QF ++ T +H C +G VV + +V G+ LRV
Sbjct: 452 ISPGIDV-----QSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGLQSLRV 506
Query: 573 VDGS 576
VD S
Sbjct: 507 VDAS 510
>sp|A4JJG6|BETA_BURVG Choline dehydrogenase OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=betA PE=3 SV=1
Length = 566
Score = 102 bits (255), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 141/541 (26%), Positives = 216/541 (39%), Gaps = 84/541 (15%)
Query: 81 FDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSA 138
+DYI+ G G+AG LA L++ N TVLLLE GG D F LA
Sbjct: 6 YDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGG---PDYRFDFRTQMPAALAYPLQGRR 62
Query: 139 SQYFISTD--------GVLNARARVLGGGSSINAGFYTRASS---------QFIERMGWD 181
+ TD + R + LGG S IN Y R ++ Q +ER W
Sbjct: 63 YNWAYETDPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHQGLER--WT 120
Query: 182 AKLVNESFPWVERQIVHQPKQEGWQ------------KALRDSLLDVGVSPFNGFTYDHI 229
F E + V G L +++++ GV T D
Sbjct: 121 YLDCLPYFRKAETRDVGPNDYHGGDGPVSVTTSKPGANPLFEAMVEAGVQAGYPRTDDLN 180
Query: 230 YGTKIGGTIFDRF----GRRHTAAE--LLASANPQKITVLIRATVQKIVFDTSGKRPKAV 283
+ G DR GRR + A L + + ++ A +I+FD GKR V
Sbjct: 181 GYQQEGFGPMDRTVTPKGRRASTARGYLDQAKTRPNLEIVTHALADRILFD--GKRASGV 238
Query: 284 GVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNA 343
+ E H + EV++ GAI +PQ+L+ SGVGP A L++L+I +VLD
Sbjct: 239 AYLRGSERATAHA-------RREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLP 291
Query: 344 HIGKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFGESRDSIHCHHG- 400
+G+ + D+ + PV ++ K+G+ ++ +G G S H G
Sbjct: 292 GVGQNLQDHLEMYIQYECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGASN---HFEAGG 348
Query: 401 -IMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLIN 459
I + + I P AI + F+ + + SP S G + L +
Sbjct: 349 FIRTRDDDPWPNI-QYHFLPVAIN--YNGSNAIEMHGFQAH--VGSMRSP-SRGRVKLRS 402
Query: 460 TNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRA 519
+ +D+PS+ FNY + LD + D +R +I++ Y + E A R+
Sbjct: 403 RDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY-----RGRELNPGADCRS 457
Query: 520 NVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYKVLGIDRLRVVDG 575
+ K L+ F + T +H C +G VV E +V G+D LRVVD
Sbjct: 458 D-----------KELDTFVRARAETAFHPSCSCKMGYDDMAVVDDEGRVHGLDGLRVVDA 506
Query: 576 S 576
S
Sbjct: 507 S 507
>sp|Q6D6D9|BETA_ERWCT Choline dehydrogenase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=betA PE=3 SV=1
Length = 559
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 140/585 (23%), Positives = 236/585 (40%), Gaps = 114/585 (19%)
Query: 81 FDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSA 138
+DYI++G G+AG LAA L++ + +VLLLE GG D + F LA
Sbjct: 3 YDYIIIGAGSAGNVLAARLTEESDVSVLLLEAGG---PDYRLDFRTQMPAALAFPLQGKR 59
Query: 139 SQYFISTD--------GVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESF- 189
+ TD + R + LGG S IN Y R ++ + + L + S+
Sbjct: 60 YNWAYETDPEPHMNDRRMECGRGKGLGGSSLINGMCYIRGNAMDFDHWATMSGLEDWSYL 119
Query: 190 ---PWVERQIVHQPKQEGWQKA---------------LRDSLLDVGVSP-------FNGF 224
P+ + + A L ++++ GV NG+
Sbjct: 120 DCLPYFRKAETRDVGANDYHGASGPVSVTTPKMGNNELFHAMVEAGVQAGYPRTDDLNGY 179
Query: 225 TYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQK-ITVLIRATVQKIVFDTSGKRPKAV 283
+ + T+ + R TA L A +K +T++ A +I+FD GKR AV
Sbjct: 180 QQEGF--GPMDRTVTPKGRRASTARGYLDQAKSRKNLTIVTHALTDRILFD--GKR--AV 233
Query: 284 GV-IFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDN 342
GV FK E+ +A + EV+L GAI +PQ+L+ SGVGPK L++L+ISVV D
Sbjct: 234 GVAYFKGESAQTAKA------RREVLLCAGAIASPQILQRSGVGPKDLLQRLDISVVHDL 287
Query: 343 AHIGKGMADNPMNAVFVPSNRPVE---------------QSLIETVGITKLGVYIEASSG 387
+G+ + D+ + PV + L GI + + G
Sbjct: 288 PGVGENLQDHLEMYLQYACKEPVSLYPALQWFNQPKIGAEWLFNGTGIGASNQF--EAGG 345
Query: 388 FGESRDSI---HCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILE 444
F SRD + + + I + K+ Q ++ + R+L
Sbjct: 346 FIRSRDEFTWPNIQYHFLPVAINYNGSNAVKE---HGFQAHVGSMRSL------------ 390
Query: 445 KIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQC 504
S G + + + + ++PS+ FNY S D + D +R+ +I+ Y
Sbjct: 391 ------SRGRVQVRSKDAREHPSILFNYMSTEQDWQEFRDAIRITREIMAQPALDKY--- 441
Query: 505 DQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGK----VVST 560
+ E +V+ + + L++F + T +H C +G+ VV
Sbjct: 442 --RGREISPGLAVQTD-----------EELDEFIRTHAETAFHPSCSCKMGEDDMSVVDG 488
Query: 561 EYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQR 605
+ V G++ LRVVD S + N T +M+ + +I R++
Sbjct: 489 QGCVHGMEGLRVVDASIMPQIITGNLNATTIMIAEKIADRIRRRQ 533
>sp|Q1MJU4|BETA_RHIL3 Choline dehydrogenase OS=Rhizobium leguminosarum bv. viciae (strain
3841) GN=betA PE=3 SV=1
Length = 549
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 138/563 (24%), Positives = 222/563 (39%), Gaps = 82/563 (14%)
Query: 82 DYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGV---PFSDVNVSFLQNFHMTLADTSPQ 136
D++++G G+AG LA LS+ +V+++E GG PF + + M +
Sbjct: 4 DFVIIGSGSAGSALAYRLSEGGKNSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYL 63
Query: 137 SASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIER---MGWDAKLVNESFPWVE 193
S + ++ + R +V+GG SSIN Y R ++ R +G + P+ +
Sbjct: 64 SEPEANLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFK 123
Query: 194 RQIVHQPKQEGWQKALRDSLLDVGVSPFN--------------GFTYDHIY-GTKIGG-- 236
R +EGW+ D L V F GF Y G+K G
Sbjct: 124 RMEHSHGGEEGWRGT--DGPLHVQRGGFTNPLFQAFVEAGKQAGFETTEDYNGSKQEGFG 181
Query: 237 ----TIFDRFGRRHTAAE-LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDEN 291
TIF GRR +AA L A + ++ Q+IV + +A GV + N
Sbjct: 182 LMEQTIFG--GRRWSAANAYLKPALKRDNVKIVYGLAQRIVIEDG----RATGVEI-ERN 234
Query: 292 GNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMAD 351
G EVI+S + +P++L LSG+GP L+ + I+V D +G + D
Sbjct: 235 GRIEVV----KANREVIVSASSFNSPKLLMLSGIGPGQHLQDMGIAVKADRPGVGANLQD 290
Query: 352 NPMNAVFVPSNRPVEQSLIETVGITKLGV----YIEASSGFGESRDSIHCHHGIMSAEIG 407
+ S +PV SL + GV ++ + G G S C + + G
Sbjct: 291 HMEFYFQQVSTKPV--SLYSWLPWFWQGVAGAQWLLSRGGLGASNQFEAC--AFLRSAPG 346
Query: 408 QLSTIPPKQRTPEAIQDYIRNKRTLPHEAFK--GGFILEKIASPISTGELSLINTNVDDN 465
P AI K F+ G+ L K S G +SL + + +
Sbjct: 347 LKQPDIQYHFLPVAIS--YDGKAAAKSHGFQVHVGYNLSK-----SRGSVSLRSADPKAD 399
Query: 466 PSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVP 525
P + FNY SH D ++ VR+ +I F +Y + + E +
Sbjct: 400 PVLRFNYMSHAEDWEKFRHCVRLTREIFGQSAFHDYRGPEIQPGEGV------------- 446
Query: 526 KHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRLRVVDGSTYD 579
+ ++ F ++ + + +H G C +G VV + +V+GID LRV D S +
Sbjct: 447 ---QSDEEIDAFLREHLESAYHPCGTCRMGAKDDPMAVVDPQTRVIGIDGLRVADSSIFP 503
Query: 580 ESPGTNPQGTVLMMGRYMGVKIL 602
N G +M G IL
Sbjct: 504 HVTYGNLNGPSIMTGEKAADHIL 526
>sp|Q7X2H8|CHOX_ARTGO Choline oxidase OS=Arthrobacter globiformis GN=codA PE=1 SV=1
Length = 546
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 145/582 (24%), Positives = 246/582 (42%), Gaps = 116/582 (19%)
Query: 81 FDYIVVGGGTAGCPLAATLSQN--FTVLLLERG----GVPFS---DVNVSFLQNFHMTLA 131
FDYIVVGGG+AG +AA LS++ +V L+E G GVP D + L++ +
Sbjct: 14 FDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDY 73
Query: 132 DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERM-------GWDAKL 184
PQ F+ +ARA+V+GG SS N+ A + ++ GW+A+
Sbjct: 74 PIEPQENGNSFMR-----HARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEA 128
Query: 185 VNESFPWVER--------------------QIVHQPKQEGWQKALRDSLLDVGV--SPFN 222
++P +R +++ P ++ AL D+ G+ + FN
Sbjct: 129 ---AWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVALLDACEQAGIPRAKFN 185
Query: 223 GFTYDHIYGTKIGGTIFDRFGRRHTAAELLASAN-------PQKITVLIRATVQKIVFDT 275
T T + G F + RR +S + + T+L +++VFD
Sbjct: 186 TGT------TVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFD- 238
Query: 276 SGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLN 335
+ +R V ++ G+ H+ ++EV+LS GAI TP++L LSG+GP A L +
Sbjct: 239 ADRRCTGVDIV-DSAFGHTHRL----TARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHG 293
Query: 336 ISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDSI 395
I V++D+ +G+ + D+P V + +P+ + E+ ++G++ G R +
Sbjct: 294 IEVLVDSPGVGEHLQDHPEGVVQFEAKQPM---VAESTQWWEIGIFTPTEDGL--DRPDL 348
Query: 396 HCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILE-KIASPISTGE 454
H+G + ++ L P + GF L + S G
Sbjct: 349 MMHYGSVPFDMNTLRHGYPTT---------------------ENGFSLTPNVTHARSRGT 387
Query: 455 LSLINTNVDDNPSVSFNYFSHPL--DLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAI 512
+ L + + D P V YF+ P D++ V G+R A +I +T +
Sbjct: 388 VRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRE------- 440
Query: 513 LNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKV------VSTEYKVLG 566
L+ V A + + L+ + + T T++H G +G V + E +V G
Sbjct: 441 LSPGVEAQTD---------EELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKG 491
Query: 567 IDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRLGK 608
+ LRV D S E NP TV+M+G I R G+
Sbjct: 492 VTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSARAGE 533
>sp|Q6UPE0|CHDH_RAT Choline dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Chdh
PE=1 SV=1
Length = 599
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 142/569 (24%), Positives = 234/569 (41%), Gaps = 99/569 (17%)
Query: 61 PPPSSSSFSPRNGDHHHHSAFDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSDV 118
PP S + S +G + +IVVG G+AGC LA L++ N VLLLE G
Sbjct: 29 PPCSCAVASAASGGK---DEYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMG 85
Query: 119 NVSFLQNFHMT---LADTSPQSASQYFIST-----DG--VLNARARVLGGGSSINAGFYT 168
+ HM +A+ + Y+ + DG + R RV GG SS+NA Y
Sbjct: 86 SKRLQWKIHMPAALVANLCDDKYNWYYHTEAQPGLDGRVLYWPRGRVWGGSSSLNAMVYI 145
Query: 169 RASSQFIERM------GWDAKLVNESFPW----------------------VERQIVHQP 200
R ++ R GWD P+ V R + P
Sbjct: 146 RGHAEDYNRWHRQGAEGWD---YAHCLPYFRKAQKHELGANMYRGGDGPLHVSRGKTNHP 202
Query: 201 KQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKI 260
+ + +A R + NGF + + TI G+R + A A P
Sbjct: 203 LHQAFLQAARQAGYPF-TEDMNGFQQEGFGWMDM--TIHQ--GKRWSTAS--AYLRPALS 255
Query: 261 TVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQML 320
+RA VQ +V + +AVGV + ++G H+A+++ EVILS GAI +PQ+L
Sbjct: 256 RPNLRAEVQTLVSRVLFEGTRAVGVEYI-KDGQSHKAYVS----REVILSGGAINSPQLL 310
Query: 321 KLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPV-----EQSLIE-TVG 374
LSGVG +L+KL I VV +G+ + D+ + +P+ ++ L + +G
Sbjct: 311 MLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQHACTQPITLHSAQKPLRKVCIG 370
Query: 375 ITKLGVYI-EASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLP 433
+ L + + ++ E+ I G+ +I Q +P + + D+ R +
Sbjct: 371 LEWLWRFTGDGATAHLETGGFIRSRPGVPHPDI-QFHFLPSQ------VIDHGR--KPTQ 421
Query: 434 HEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIV 493
EA++ + S G L L +TN D+P ++ NY S D++ V++ +I
Sbjct: 422 QEAYQ---VHVGTMRATSVGWLKLRSTNPQDHPMINPNYLSTETDVEDFRQCVKLTREIF 478
Query: 494 QSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCH 553
+ F A R H K ++ F + + +H C
Sbjct: 479 AQEAF----------------APFRGKELQPGSHVQSDKEIDAFVRAKADSAYHPSCTCK 522
Query: 554 VGK------VVSTEYKVLGIDRLRVVDGS 576
+G+ VV + +V+G++ LRV+D S
Sbjct: 523 MGQPSDPTAVVDQQTRVIGVENLRVIDAS 551
>sp|B4EHJ2|BETA_BURCJ Choline dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=betA PE=3 SV=1
Length = 566
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 138/540 (25%), Positives = 215/540 (39%), Gaps = 82/540 (15%)
Query: 81 FDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSA 138
+DYI+ G G+AG LA L+++ TVLLLE GG D F LA
Sbjct: 6 YDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGG---PDYRFDFRTQMPAALAYPLQGRR 62
Query: 139 SQYFISTDG--------VLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESF- 189
+ TD + R + LGG S IN Y R ++ + L N ++
Sbjct: 63 YNWAYETDPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWTYL 122
Query: 190 ---PWVERQIVHQPKQEGWQ---------------KALRDSLLDVGVSPFNGFTYDHIYG 231
P+ ++ + L ++++D GV T D
Sbjct: 123 DCLPYFKKAETRDVGPNDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDLNGY 182
Query: 232 TKIGGTIFDRF----GRRHTAAELL---ASANPQKITVLIRATVQKIVFDTSGKRPKAVG 284
+ G DR GRR + A A A P + ++ A +I+FD GKR V
Sbjct: 183 QQEGFGPMDRTVTPKGRRASTARGYLDQAKARPN-LEIVTHALADRILFD--GKRASGVT 239
Query: 285 VIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAH 344
+ E H + EV++ GAI +PQ+L+ SGVGP A L+ L+I VVLD
Sbjct: 240 YLRGSERATAHA-------RREVLVCSGAIASPQLLQRSGVGPGAWLKALDIPVVLDLPG 292
Query: 345 IGKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFGESRDSIHCHHG-- 400
+G+ + D+ + PV ++ K+G+ ++ +G G S H G
Sbjct: 293 VGQNLQDHLEMYIQYECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGASN---HFEAGGF 349
Query: 401 IMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINT 460
I + + I P AI + F+ + + SP S G + L +
Sbjct: 350 IRTRDDDPWPNI-QYHFLPVAIN--YNGSNAIEMHGFQAH--VGSMRSP-SRGRVKLRSR 403
Query: 461 NVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRAN 520
+ +D+PS+ FNY + LD + D +R +I++ Y + E A + +
Sbjct: 404 DPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY-----RGRELNPGADCKTD 458
Query: 521 VNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYKVLGIDRLRVVDGS 576
K L+ F + T +H C +G VV E +V G+D LRVVD S
Sbjct: 459 -----------KELDAFVRARAETAFHPSCSCKMGYDDMAVVDEEGRVHGLDGLRVVDAS 507
>sp|B1K707|BETA_BURCC Choline dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3)
GN=betA PE=3 SV=1
Length = 566
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 141/574 (24%), Positives = 228/574 (39%), Gaps = 85/574 (14%)
Query: 81 FDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSA 138
+DYI+ G G+AG LA L+++ TVLLLE GG D F LA
Sbjct: 6 YDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGG---PDYRFDFRTQMPAALAYPLQGRR 62
Query: 139 SQYFISTD--------GVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESF- 189
+ TD + R + LGG S IN Y R ++ + L N ++
Sbjct: 63 YNWAYETDPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWTYL 122
Query: 190 ---PWVERQIVHQPKQEGWQ---------------KALRDSLLDVGVSP-------FNGF 224
P+ ++ + L ++++D GV NG+
Sbjct: 123 DCLPYFKKAETRDVGPNDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDLNGY 182
Query: 225 TYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQ-KITVLIRATVQKIVFDTSGKRPKAV 283
+ + T+ + R TA L A + + ++ A +I+FD GKR V
Sbjct: 183 QQEGF--GPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKRASGV 238
Query: 284 GVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNA 343
+ E H + EV++ GAI +PQ+L+ SGVGP A L++L+I VVLD
Sbjct: 239 TYLRGSERATAHA-------RREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLP 291
Query: 344 HIGKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFGESRDSIHCHHG- 400
+G+ + D+ + PV ++ K+G+ ++ +G G S H G
Sbjct: 292 GVGQNLQDHLEMYIQYECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGASN---HFEAGG 348
Query: 401 -IMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLIN 459
I + + I P AI + F+ + + SP S G + L +
Sbjct: 349 FIRTRDDDPWPNI-QYHFLPVAIN--YNGSNAIEMHGFQAH--VGSMRSP-SRGRVKLRS 402
Query: 460 TNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRA 519
+ +D+PS+ FNY + LD + D +R +I++ Y + E A ++
Sbjct: 403 RDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY-----RGRELNPGADCKS 457
Query: 520 NVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYKVLGIDRLRVVDG 575
+ K L+ F + T +H C +G VV E +V G+D LRVVD
Sbjct: 458 D-----------KELDAFVRARAETAFHPSCSCKMGYDDMAVVDEEGRVHGLDGLRVVDA 506
Query: 576 STYDESPGTNPQGTVLMMGRYMGVKIL-RQRLGK 608
S N +M+ + KI RQ L +
Sbjct: 507 SIMPIITTGNLNAPTIMIAEKIADKIRGRQPLAR 540
>sp|B1Z034|BETA_BURA4 Choline dehydrogenase OS=Burkholderia ambifaria (strain MC40-6)
GN=betA PE=3 SV=1
Length = 566
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 142/572 (24%), Positives = 227/572 (39%), Gaps = 81/572 (14%)
Query: 81 FDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSA 138
+DYI+ G G+AG LA L++ N TVLLLE GG D F LA
Sbjct: 6 YDYIICGAGSAGNVLATRLTEDPNVTVLLLEAGG---PDYRFDFRTQMPAALAYPLQGRR 62
Query: 139 SQYFISTD--------GVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESF- 189
+ TD + R + LGG S IN Y R ++ + L N ++
Sbjct: 63 YNWAYETDPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWTYL 122
Query: 190 ---PWVERQIVHQPKQEGWQ---------------KALRDSLLDVGVSPFNGFTYDHIYG 231
P+ ++ + L ++++D GV T D
Sbjct: 123 DCLPYFKKAETRDVGPNDYHGGDGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDLNGY 182
Query: 232 TKIGGTIFDRF----GRRHTAAE--LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGV 285
+ G DR GRR + A L + + ++ A +I+FD GKR V
Sbjct: 183 QQEGFGPMDRTVTPKGRRASTARGYLDQAKGRPNLEIVTHALADRILFD--GKRASGVTY 240
Query: 286 IFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHI 345
+ E N H + EV++ GAI +PQ+L+ SGVGP A L++L+I +VLD +
Sbjct: 241 LRGSERANAHA-------RREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPIVLDLPGV 293
Query: 346 GKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFGESRDSIHCHHG--I 401
G+ + D+ + PV ++ K+G+ ++ +G G S H G I
Sbjct: 294 GQNLQDHLEMYIQYECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGASN---HFEAGGFI 350
Query: 402 MSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTN 461
+ + I P AI + F+ + + SP S G + L + +
Sbjct: 351 RTRDDDPWPNI-QYHFLPVAIN--YNGSNAIEMHGFQAH--VGSMRSP-SRGRVKLRSRD 404
Query: 462 VDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANV 521
+ +PS+ FNY + LD + D +R +I++ Y + E A +++
Sbjct: 405 PNAHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY-----RGRELNPGADCKSD- 458
Query: 522 NLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYKVLGIDRLRVVDGST 577
K L+ F + T +H C +G VV E +V G++ LRVVD S
Sbjct: 459 ----------KELDTFVRSRAETAFHPSCSCKMGYDDMAVVDEEGRVHGLEGLRVVDASI 508
Query: 578 YDESPGTNPQGTVLMMGRYMGVKIL-RQRLGK 608
N +M+ + KI RQ L +
Sbjct: 509 MPIITTGNLNAPTIMIAEKIADKIRGRQPLAR 540
>sp|A0B2F7|BETA_BURCH Choline dehydrogenase OS=Burkholderia cenocepacia (strain HI2424)
GN=betA PE=3 SV=1
Length = 566
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 134/541 (24%), Positives = 217/541 (40%), Gaps = 84/541 (15%)
Query: 81 FDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSA 138
+DYI+ G G+AG LA L+++ TVLLLE GG D F LA
Sbjct: 6 YDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGG---PDYRFDFRTQMPAALAYPLQGRR 62
Query: 139 SQYFISTD--------GVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESF- 189
+ TD + R + LGG S IN Y R ++ + L N ++
Sbjct: 63 YNWAYETDPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWTYL 122
Query: 190 ---PWVERQIVHQPKQEGWQ---------------KALRDSLLDVGVSP-------FNGF 224
P+ ++ + L ++++D GV NG+
Sbjct: 123 DCLPYFKKAETRDVGPNDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDLNGY 182
Query: 225 TYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQ-KITVLIRATVQKIVFDTSGKRPKAV 283
+ + T+ + R TA L A + + ++ A +I+FD GKR V
Sbjct: 183 QQEGF--GPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKRASGV 238
Query: 284 GVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNA 343
+ E H + EV++ GAI +PQ+L+ SGVGP A L++L+I VVLD
Sbjct: 239 TYLRGSERATAHA-------RREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLP 291
Query: 344 HIGKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFGESRDSIHCHHG- 400
+G+ + D+ + PV ++ K+G+ ++ +G G S H G
Sbjct: 292 GVGQNLQDHLEMYIQYECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGASN---HFEAGG 348
Query: 401 -IMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLIN 459
I + + I P AI + F+ + + SP S G + L +
Sbjct: 349 FIRTRDDDPWPNI-QYHFLPVAIN--YNGSNAIEMHGFQAH--VGSMRSP-SRGRVKLRS 402
Query: 460 TNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRA 519
+ +D+PS+ FNY + LD + D +R +I++ Y + E A ++
Sbjct: 403 RDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY-----RGRELNPGADCKS 457
Query: 520 NVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYKVLGIDRLRVVDG 575
+ K L+ F + T +H C +G VV E +V G+D LRVVD
Sbjct: 458 D-----------KELDAFVRARAETAFHPSCSCKMGYDDMAVVDEEGRVHGLDGLRVVDA 506
Query: 576 S 576
S
Sbjct: 507 S 507
>sp|Q1BQE2|BETA_BURCA Choline dehydrogenase OS=Burkholderia cenocepacia (strain AU 1054)
GN=betA PE=3 SV=1
Length = 566
Score = 100 bits (250), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 134/541 (24%), Positives = 217/541 (40%), Gaps = 84/541 (15%)
Query: 81 FDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSA 138
+DYI+ G G+AG LA L+++ TVLLLE GG D F LA
Sbjct: 6 YDYIICGAGSAGNVLATRLTEDPDVTVLLLEAGG---PDYRFDFRTQMPAALAYPLQGRR 62
Query: 139 SQYFISTD--------GVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESF- 189
+ TD + R + LGG S IN Y R ++ + L N ++
Sbjct: 63 YNWAYETDPEPHMDNRRMECGRGKGLGGSSLINGMCYIRGNALDYDNWSTHKGLENWTYL 122
Query: 190 ---PWVERQIVHQPKQEGWQ---------------KALRDSLLDVGVSP-------FNGF 224
P+ ++ + L ++++D GV NG+
Sbjct: 123 DCLPYFKKAETRDVGPNDYHGGSGPVSVTTSKPGVNPLFEAMVDAGVQAGYPRTDDLNGY 182
Query: 225 TYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQ-KITVLIRATVQKIVFDTSGKRPKAV 283
+ + T+ + R TA L A + + ++ A +I+FD GKR V
Sbjct: 183 QQEGF--GPMDRTVTPKGRRASTARGYLDQAKVRPNLEIVTHALADRILFD--GKRASGV 238
Query: 284 GVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNA 343
+ E H + EV++ GAI +PQ+L+ SGVGP A L++L+I VVLD
Sbjct: 239 TYLRGSERATAHA-------RREVLVCSGAIASPQLLQRSGVGPGAWLKELDIPVVLDLP 291
Query: 344 HIGKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFGESRDSIHCHHG- 400
+G+ + D+ + PV ++ K+G+ ++ +G G S H G
Sbjct: 292 GVGQNLQDHLEMYIQYECKEPVSLYPALKWWNQPKIGLEWMLNGTGLGASN---HFEAGG 348
Query: 401 -IMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLIN 459
I + + I P AI + F+ + + SP S G + L +
Sbjct: 349 FIRTRDDDPWPNI-QYHFLPVAIN--YNGSNAIEMHGFQAH--VGSMRSP-SRGRVKLRS 402
Query: 460 TNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRA 519
+ +D+PS+ FNY + LD + D +R +I++ Y + E A ++
Sbjct: 403 RDPNDHPSILFNYMAEALDWREFRDAIRATREIMRQPALDRY-----RGRELNPGADCKS 457
Query: 520 NVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYKVLGIDRLRVVDG 575
+ K L+ F + T +H C +G VV E +V G+D LRVVD
Sbjct: 458 D-----------KELDAFVRARAETAFHPSCSCKMGYDDMAVVDEEGRVHGLDGLRVVDA 506
Query: 576 S 576
S
Sbjct: 507 S 507
>sp|A7MFA8|BETA_CROS8 Choline dehydrogenase OS=Cronobacter sakazakii (strain ATCC
BAA-894) GN=betA PE=3 SV=1
Length = 559
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 137/566 (24%), Positives = 232/566 (40%), Gaps = 82/566 (14%)
Query: 81 FDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLA------- 131
FDYI++G G+AG LA L+++ TVLLLE GG D F LA
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDSDVTVLLLEAGG---PDYRFDFRTQMPAALAYPLQGKR 59
Query: 132 -DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASS----QFIERMGWDAKLVN 186
+ + ++ + +++ + R + LGG S IN Y R ++ + ++ G +
Sbjct: 60 YNWAYETEPEPYMNNRRMECGRGKGLGGSSLINGMCYIRGNAMDLDNWAQQPGLERWTYL 119
Query: 187 ESFPWVERQIVHQPKQEGWQ---------------KALRDSLLDVGVSPFNGFTYDHIYG 231
+ P+ + + L ++++ GV T D
Sbjct: 120 DCLPYYRKSETRDIGANDYHGGDGPVSITTCKPGNNPLFAAMIEAGVQAGYPRTDDLNGY 179
Query: 232 TKIGGTIFDRF----GRRHTAAELLASANPQK--ITVLIRATVQKIVFDTSGKRPKAVGV 285
+ G DRF GRR + A Q+ + ++ AT +I+F+ +AVGV
Sbjct: 180 QQEGFGPMDRFVTPKGRRSSTARGYLDTAKQRPNLKIITHATTDRILFENK----RAVGV 235
Query: 286 IFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHI 345
+ N Q A + EV+L GAI +PQ+L+ SGVG L++ +I VV D +
Sbjct: 236 AYLHGASNTPQEVHA---RREVLLCAGAIASPQILQRSGVGNAELLKQFDIPVVHDLPGV 292
Query: 346 GKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFGESRDSIHCHHG--I 401
G+ + D+ + PV ++ K+G ++ +G G S H G I
Sbjct: 293 GENLQDHLEMYLQYECKEPVSLYPALKWWNQPKIGAEWLFNGTGIGASN---HFEGGGFI 349
Query: 402 MSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILE--KIASPISTGELSLIN 459
S E I P AI +Y + H GF + SP S G + + +
Sbjct: 350 RSREEFAWPNI-QYHFLPVAI-NYNGSNAVEAH-----GFQCHVGSMRSP-SRGHVRIKS 401
Query: 460 TNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRA 519
+ +P++ FNY SH D + D +R+ +I+ +Q +++ +
Sbjct: 402 RDPHQHPAILFNYMSHEQDWQEFRDAIRITRQII-----------NQPALDKFRGREISP 450
Query: 520 NVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGK----VVSTEYKVLGIDRLRVVDG 575
++ + L++F ++ T +H G C +G VV E +V G++ LRVVD
Sbjct: 451 GID-----CQTDEQLDEFVRNHAETAYHPCGTCKMGSDEMAVVDDEGRVHGLEGLRVVDA 505
Query: 576 STYDESPGTNPQGTVLMMGRYMGVKI 601
S N T +M+G + I
Sbjct: 506 SIMPLIITGNLNATTIMIGEKIADNI 531
>sp|Q1IG70|BETA_PSEE4 Choline dehydrogenase OS=Pseudomonas entomophila (strain L48)
GN=betA PE=3 SV=1
Length = 565
Score = 100 bits (249), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 145/578 (25%), Positives = 234/578 (40%), Gaps = 106/578 (18%)
Query: 81 FDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLA------- 131
FDYI+VG G+AG LA L+++ +VLLLE GG D F LA
Sbjct: 5 FDYIIVGAGSAGNTLATRLTEDASVSVLLLEAGG---PDYRFDFRTQMPAALAFPLQGRR 61
Query: 132 -DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESFP 190
+ + ++ + F+ + R + LGG S IN Y R ++ + GW E +
Sbjct: 62 YNWAYETDPEPFMDGRRMECGRGKGLGGSSLINGMCYIRGNAMDFD--GWAELPGLEDWT 119
Query: 191 WVE----------RQI-------------VHQPKQEGWQKALRDSLLDVGVSPFNGFTYD 227
+++ R I V PK L ++++ GV T D
Sbjct: 120 YLDCLPYFRKAETRDIGPNDYHGGEGPVSVATPKAG--NNPLFHAMVEAGVQAGYPRTED 177
Query: 228 HIYGTKIGGTIFDRF----GRRHTAAE--LLASANPQKITVLIRATVQKIVFDTSGKRPK 281
+ G DR GRR + A L + +T++ A +++FD GKR
Sbjct: 178 LNGYQQEGFGPMDRSVTKKGRRSSTARGYLDQAKKRPNLTIVTHALSDRVLFD--GKR-- 233
Query: 282 AVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLD 341
AVGV + + + + + EVI+S GAI +PQ+L+ SGVGP+A LE L+I VV D
Sbjct: 234 AVGVTYLVGDSEER---VEARARKEVIVSSGAIASPQLLQRSGVGPRALLESLDIPVVHD 290
Query: 342 NAHIGKGMADNPMNAVFVPSNRPVE--QSLI----ETVGITKL--GVYIEASSGFGESRD 393
+G+ + D+ + +PV SL+ +G L G I AS+ F
Sbjct: 291 LPGVGENLQDHLELYLQYACTQPVSLYPSLLWWNQPAIGAEWLFNGTGIGASNQF----- 345
Query: 394 SIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYI------RNKRTLPHEAFKGGFILEKIA 447
E G P+ + P ++ + F+ + +
Sbjct: 346 -----------EAGGFIRTRPEFKWPNIQYHFLPVAINYNGSNGVKEHGFQAH--MGSMR 392
Query: 448 SPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQK 507
SP + G + + + +PS+ FNY S D + DG+R+ +I+ Q
Sbjct: 393 SP-ARGRIQAKSKDPRQHPSILFNYMSTEQDWQEFRDGIRLTREIMA-----------QP 440
Query: 508 SVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYK 563
+++A + H + L++F ++ T +H C +G VV E +
Sbjct: 441 ALDAFRGREISPGA-----HVQTDEELDKFIREHAETAFHPSCSCKMGTDDMAVVDGEGR 495
Query: 564 VLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKI 601
V G+ LRVVD S N T +M+ + KI
Sbjct: 496 VHGMQGLRVVDASIMPLIITGNLNATTIMIAEKISDKI 533
>sp|Q4ZM63|BETA_PSEU2 Choline dehydrogenase OS=Pseudomonas syringae pv. syringae (strain
B728a) GN=betA PE=3 SV=1
Length = 568
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 137/546 (25%), Positives = 232/546 (42%), Gaps = 86/546 (15%)
Query: 78 HSAFDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLA---- 131
S +DYI++G G+AG LAA L+++ TVLLLE GG D + F LA
Sbjct: 4 QSEYDYIIIGAGSAGNTLAARLTEDAGVTVLLLEAGG---PDYRLDFRTQMPAALAFPLQ 60
Query: 132 ----DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNE 187
+ + ++ + ++ + R + LGG S IN Y R ++ ++ GW + E
Sbjct: 61 GRRYNWAYETEPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNA--MDYDGWAKEPGLE 118
Query: 188 SFPWVE----------RQI-------------VHQPKQEGWQKALRDSLLDVGVSPFNGF 224
+ +++ R I V PK L ++++ GV
Sbjct: 119 DWSYLDCLPYFRKAETRDIGPNDYHGGEGPVSVTTPK--AGNNPLFHAMVEAGVQAGFPR 176
Query: 225 TYDHIYGTKIGGTIFDRF----GRRHTAAE--LLASANPQKITVLIRATVQKIVFDTSGK 278
T D + G DR GRR + A L + +T++ A +I+F+ GK
Sbjct: 177 TDDLNGYQQEGFGPMDRTVTPNGRRASTARGYLDEAKKRSTLTIVTHALTDRILFE--GK 234
Query: 279 RPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISV 338
R V + D + + + EV+L GAI +PQ+L+ SGVGP L KL+I V
Sbjct: 235 RAVGVAYLVGDSDTR-----IQARARKEVLLCGGAIASPQILQRSGVGPAEVLNKLDIPV 289
Query: 339 VLDNAHIGKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFGESRDSIH 396
V D +G+ + D+ + +PV ++ +G ++ +G G S +
Sbjct: 290 VHDLPGVGQNLQDHLEMYLQYACTQPVSLYPSLKWWNQPAIGAEWMFLGTGIGAS-NQFE 348
Query: 397 CHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFI--LEKIASPISTGE 454
I S+E + I P AI +Y K H GF + + SP S G
Sbjct: 349 AGGFIRSSEAFEWPNI-QYHFLPVAI-NYNGTKGVQEH-----GFQAHVGSMRSP-SRGR 400
Query: 455 LSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILN 514
+ + + + + PS+ FNY + D + DG+R+ +I+Q Q +++
Sbjct: 401 VQVKSKDPREYPSILFNYMASEQDWQEFRDGIRLTREIMQ-----------QPALDPYRG 449
Query: 515 ASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYKVLGIDRL 570
+ +++ ++L+QF ++ T +H C +G VV + +V G+ L
Sbjct: 450 REISPGIDV-----QSDEALDQFVREHAETAYHPSCSCKMGTDEMAVVDGQGRVHGLQSL 504
Query: 571 RVVDGS 576
RVVD S
Sbjct: 505 RVVDAS 510
>sp|A4XPI5|BETA_PSEMY Choline dehydrogenase OS=Pseudomonas mendocina (strain ymp) GN=betA
PE=3 SV=1
Length = 565
Score = 100 bits (248), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 138/572 (24%), Positives = 233/572 (40%), Gaps = 94/572 (16%)
Query: 81 FDYIVVGGGTAGCPLAATLSQN--FTVLLLERGGVPFSDVNVSFLQNFHMTLA------- 131
FDYI++G G+AG LA L+++ +VLLLE GG D + F LA
Sbjct: 5 FDYIIIGAGSAGNVLATRLTEDADVSVLLLEAGG---PDYRLDFRTQMPAALAFPLQGRR 61
Query: 132 -DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASS----QFIERMGWDAKLVN 186
+ + ++ + ++ + R + LGG S IN Y R ++ + + G + +
Sbjct: 62 YNWAYETDPEPHMNNRRMECGRGKGLGGSSLINGMCYIRGNALDFDNWAKAKGLEDWTYH 121
Query: 187 ESFPWVE----RQI-------------VHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHI 229
+ P+ R I V PK L ++++ GV T D
Sbjct: 122 DCLPYFRKAESRDIGPNDYHGGDGPVSVTTPK--AGNNPLFHAMVEAGVQAGYPRTDDLN 179
Query: 230 YGTKIGGTIFDRF----GRRHTAAE--LLASANPQKITVLIRATVQKIVFDTSGKRPKAV 283
+ G DR GRR + A L + +T++ AT +I+FD GKR V
Sbjct: 180 GYQQEGFGPMDRTVTPQGRRASTARGYLDQARERPNLTIVTHATTDRILFD--GKRASGV 237
Query: 284 GVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNA 343
+ GN + A A + EV+L GAI +PQ+L+ SGVGP A L +L+I++V +
Sbjct: 238 SYLI----GNANDATEA-RARREVLLCAGAIASPQILQRSGVGPAALLRELDIALVHELP 292
Query: 344 HIGKGMADNPMNAVFVPSNRPVE----QSLIETVGITKLGVYIEASSGFGESRDSIHCHH 399
+G+ + D+ + +PV L+ GI ++ +G G S
Sbjct: 293 GVGQNLQDHLEMYLQYACTQPVSLYPALKLLNQPGIGAQWLF--TGNGIGASN------- 343
Query: 400 GIMSAEIGQLSTIPPKQRTPEAIQDYI------RNKRTLPHEAFKGGFILEKIASPISTG 453
E G P+ P ++ + F+ + + SP S G
Sbjct: 344 ---QFEAGGFIRTRPEFAWPNIQFHFLPVAINYNGSNAVNEHGFQAH--VGSMRSP-SRG 397
Query: 454 ELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAIL 513
+ L + + +PS+ FNY SH D + D +R+ +I+ Q ++++
Sbjct: 398 RIQLKSKDPRQHPSILFNYMSHEQDWQEFRDAIRITREIMA-----------QPALDSYR 446
Query: 514 NASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGK----VVSTEYKVLGIDR 569
+ ++ L+ F ++ T +H C +G+ VV + +V G+
Sbjct: 447 GREISPGID-----CQSDAELDAFIREHAETAFHPSCSCKMGEDDMAVVDGQGRVHGVQG 501
Query: 570 LRVVDGSTYDESPGTNPQGTVLMMGRYMGVKI 601
LRVVD S E N T +MM + +I
Sbjct: 502 LRVVDASIMPEIITGNLNATTIMMAEKIADRI 533
>sp|B7N8L3|BETA_ECOLU Choline dehydrogenase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=betA PE=3 SV=1
Length = 556
Score = 99.8 bits (247), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 143/566 (25%), Positives = 232/566 (40%), Gaps = 82/566 (14%)
Query: 81 FDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSDVNVSFLQNFHMTLA------- 131
FDYI++G G+AG LA L++ N TVLLLE GG D F LA
Sbjct: 3 FDYIIIGAGSAGNVLATRLTEDPNTTVLLLEAGG---PDYRFDFRTQMPAALAFPLQGKR 59
Query: 132 -DTSPQSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSQFIERMGWDAKLVNESF- 189
+ + ++ + F++ + R + LGG S IN Y R ++ ++ + L N S+
Sbjct: 60 YNWAYETEPEPFMNNRRMECGRGKGLGGSSLINGMCYIRGNALDLDNWAQEPGLENWSYL 119
Query: 190 ---PWVERQIVHQPKQEGWQ---------------KALRDSLLDVGVSPFNGFTYDHIYG 231
P+ + + + L +++++ GV T D
Sbjct: 120 DCLPYYRKAETRDVGENDYHGGDGPVSVTTSKPGVNPLFEAMIEAGVQAGYPRTDDLNGY 179
Query: 232 TKIGGTIFDR----FGRRHTAAE--LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGV 285
+ G DR GRR + A L + + +T+ A I+FD GKR AVGV
Sbjct: 180 QQEGFGPMDRTVTPHGRRASTARGYLDQAKSRPNLTIRTHAMTDHIIFD--GKR--AVGV 235
Query: 286 IFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHI 345
+ + + A EV+L GAI +PQ+L+ SGVG L + +I +V D +
Sbjct: 236 EWLEGDSTIPTRATA---NKEVLLCAGAIASPQILQRSGVGSAELLAEFDIPLVHDLPGV 292
Query: 346 GKGMADNPMNAVFVPSNRPVE-QSLIETVGITKLGV-YIEASSGFGESRDSIHCHHG--I 401
G+ + D+ + PV ++ K+G ++ +G G S H G I
Sbjct: 293 GENLQDHLEMYLQYECKEPVSLYPALQWWNQPKIGAEWLFGGTGVGASN---HFEAGGFI 349
Query: 402 MSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILE--KIASPISTGELSLIN 459
S E I P AI +Y + H GF + SP S G + + +
Sbjct: 350 RSREEFAWPNIQ-YHFLPVAI-NYNGSNAVKEH-----GFQCHVGSMRSP-SRGHVRIKS 401
Query: 460 TNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRA 519
+ +P++ FNY SH D + D +R+ +I+ Q +++ +
Sbjct: 402 RDPHQHPAILFNYMSHEQDWQEFRDAIRITREIMH-----------QPALDQYRGREISP 450
Query: 520 NVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYKVLGIDRLRVVDG 575
V + L++F ++ T +H G C +G VV E +V G++ LRVVD
Sbjct: 451 GV-----ECQTDEQLDEFVRNHAETAFHPCGTCKMGYDEMAVVDGEGRVHGLEGLRVVDA 505
Query: 576 STYDESPGTNPQGTVLMMGRYMGVKI 601
S + N T +M+G M I
Sbjct: 506 SIMPQIITGNLNATTIMIGEKMADMI 531
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 229,609,806
Number of Sequences: 539616
Number of extensions: 9959482
Number of successful extensions: 28725
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 156
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 28045
Number of HSP's gapped (non-prelim): 454
length of query: 612
length of database: 191,569,459
effective HSP length: 123
effective length of query: 489
effective length of database: 125,196,691
effective search space: 61221181899
effective search space used: 61221181899
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)