Query 007210
Match_columns 612
No_of_seqs 366 out of 2282
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 19:58:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007210.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007210hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ju2_A HydroxynitrIle lyase; f 100.0 8.2E-81 2.8E-85 680.8 36.5 489 78-609 24-521 (536)
2 3fim_B ARYL-alcohol oxidase; A 100.0 2.3E-81 7.8E-86 683.9 31.9 498 80-604 2-565 (566)
3 3qvp_A Glucose oxidase; oxidor 100.0 3.7E-80 1.3E-84 674.9 31.7 490 78-605 17-579 (583)
4 3q9t_A Choline dehydrogenase a 100.0 1.6E-77 5.4E-82 655.1 31.2 493 78-604 4-572 (577)
5 1gpe_A Protein (glucose oxidas 100.0 1.8E-74 6.3E-79 636.2 29.8 503 78-606 22-584 (587)
6 3t37_A Probable dehydrogenase; 100.0 3.6E-73 1.2E-77 623.7 32.2 471 78-603 15-522 (526)
7 2jbv_A Choline oxidase; alcoho 100.0 1.7E-71 5.8E-76 608.6 31.7 477 79-606 12-531 (546)
8 1kdg_A CDH, cellobiose dehydro 100.0 3.4E-63 1.2E-67 545.4 23.9 476 78-605 5-543 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 4.9E-60 1.7E-64 514.0 22.8 436 78-606 3-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 1.3E-58 4.4E-63 502.9 23.2 439 78-607 9-507 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 9.2E-48 3.1E-52 425.6 29.4 477 77-611 43-619 (623)
12 4at0_A 3-ketosteroid-delta4-5a 99.7 1.6E-16 5.4E-21 172.6 13.5 195 78-323 39-273 (510)
13 1y0p_A Fumarate reductase flav 99.6 2.2E-14 7.7E-19 157.9 15.3 190 78-321 124-324 (571)
14 1qo8_A Flavocytochrome C3 fuma 99.6 1.9E-14 6.6E-19 158.1 14.3 191 77-321 118-319 (566)
15 1d4d_A Flavocytochrome C fumar 99.5 3.4E-13 1.2E-17 148.2 16.5 192 78-323 124-326 (572)
16 2h88_A Succinate dehydrogenase 99.4 1.2E-12 4.2E-17 144.0 13.9 57 251-316 161-218 (621)
17 2bs2_A Quinol-fumarate reducta 99.4 1.5E-12 5.3E-17 144.3 14.7 57 251-316 164-221 (660)
18 2wdq_A Succinate dehydrogenase 99.4 1.9E-12 6.6E-17 142.3 13.1 58 251-316 149-207 (588)
19 1chu_A Protein (L-aspartate ox 99.3 3.8E-12 1.3E-16 138.5 11.5 61 251-316 144-209 (540)
20 1kf6_A Fumarate reductase flav 99.3 1.9E-11 6.4E-16 134.7 14.2 58 251-317 140-199 (602)
21 3gyx_A Adenylylsulfate reducta 99.2 1.5E-11 5.1E-16 136.3 9.8 60 251-316 172-234 (662)
22 1jnr_A Adenylylsulfate reducta 99.2 2.5E-11 8.6E-16 134.9 10.7 60 251-316 157-219 (643)
23 2i0z_A NAD(FAD)-utilizing dehy 99.2 7.7E-11 2.6E-15 125.6 11.2 55 251-318 140-194 (447)
24 3da1_A Glycerol-3-phosphate de 99.2 1.2E-10 4E-15 127.5 12.3 66 251-326 176-242 (561)
25 3dme_A Conserved exported prot 99.1 6.4E-11 2.2E-15 122.6 8.7 63 251-325 156-219 (369)
26 2rgh_A Alpha-glycerophosphate 99.1 5.2E-10 1.8E-14 122.6 12.0 65 251-325 194-259 (571)
27 3nyc_A D-arginine dehydrogenas 99.0 2.7E-10 9.1E-15 118.5 8.4 36 78-113 7-42 (381)
28 3v76_A Flavoprotein; structura 99.0 3.7E-10 1.3E-14 118.7 9.4 37 78-114 25-62 (417)
29 2e5v_A L-aspartate oxidase; ar 99.0 4.8E-10 1.6E-14 120.1 10.2 52 251-315 125-176 (472)
30 1y56_B Sarcosine oxidase; dehy 99.0 5.9E-10 2E-14 116.1 9.1 59 251-324 155-213 (382)
31 3dje_A Fructosyl amine: oxygen 99.0 6.9E-10 2.4E-14 117.9 8.6 37 78-114 4-42 (438)
32 2gag_B Heterotetrameric sarcos 98.9 6.7E-09 2.3E-13 108.9 14.8 35 78-112 19-56 (405)
33 3ps9_A TRNA 5-methylaminomethy 98.9 1.1E-09 3.9E-14 122.7 9.0 34 79-112 271-305 (676)
34 2oln_A NIKD protein; flavoprot 98.9 6.6E-09 2.2E-13 108.8 14.2 35 79-113 3-38 (397)
35 2qcu_A Aerobic glycerol-3-phos 98.9 4.7E-09 1.6E-13 113.4 13.2 60 251-321 155-215 (501)
36 3nlc_A Uncharacterized protein 98.9 1.3E-09 4.4E-14 117.9 8.7 36 78-113 105-141 (549)
37 2gqf_A Hypothetical protein HI 98.9 2.7E-09 9.1E-14 111.7 10.0 35 79-113 3-38 (401)
38 1rp0_A ARA6, thiazole biosynth 98.9 5E-09 1.7E-13 104.4 11.1 35 79-113 38-74 (284)
39 3jsk_A Cypbp37 protein; octame 98.9 5.7E-09 1.9E-13 105.3 10.9 35 79-113 78-115 (344)
40 3cgv_A Geranylgeranyl reductas 98.9 7.7E-09 2.6E-13 108.1 12.1 64 251-326 108-171 (397)
41 3pvc_A TRNA 5-methylaminomethy 98.9 3.4E-09 1.2E-13 119.0 10.0 35 78-112 262-297 (689)
42 1ryi_A Glycine oxidase; flavop 98.9 2.7E-09 9.2E-14 111.1 7.6 35 78-112 15-50 (382)
43 3oz2_A Digeranylgeranylglycero 98.8 8.3E-09 2.9E-13 107.5 11.1 36 79-114 3-39 (397)
44 3e1t_A Halogenase; flavoprotei 98.8 1.1E-08 3.9E-13 110.7 11.8 57 251-316 117-173 (512)
45 4dgk_A Phytoene dehydrogenase; 98.8 1.3E-09 4.5E-14 117.9 4.3 60 250-322 226-285 (501)
46 1pj5_A N,N-dimethylglycine oxi 98.8 8.4E-09 2.9E-13 118.4 10.8 60 251-325 157-216 (830)
47 3atr_A Conserved archaeal prot 98.8 1.8E-08 6E-13 107.5 12.4 57 251-316 106-163 (453)
48 3axb_A Putative oxidoreductase 98.8 9.8E-09 3.4E-13 109.3 9.9 34 78-111 21-56 (448)
49 3p1w_A Rabgdi protein; GDI RAB 98.8 1.9E-08 6.5E-13 106.5 10.9 42 77-118 17-59 (475)
50 3ka7_A Oxidoreductase; structu 98.8 9.8E-09 3.4E-13 108.4 8.6 57 251-321 202-258 (425)
51 2gf3_A MSOX, monomeric sarcosi 98.7 6.2E-08 2.1E-12 100.9 12.8 34 80-113 3-37 (389)
52 2zxi_A TRNA uridine 5-carboxym 98.7 8.3E-09 2.8E-13 112.0 6.2 34 79-112 26-60 (637)
53 3ces_A MNMG, tRNA uridine 5-ca 98.7 9.1E-09 3.1E-13 112.2 6.1 34 79-112 27-61 (651)
54 3nix_A Flavoprotein/dehydrogen 98.7 3.4E-08 1.2E-12 104.1 9.4 35 79-113 4-39 (421)
55 2gmh_A Electron transfer flavo 98.7 3.1E-08 1.1E-12 108.8 9.0 58 251-316 150-218 (584)
56 2uzz_A N-methyl-L-tryptophan o 98.7 5.7E-08 1.9E-12 100.5 10.5 34 80-113 2-36 (372)
57 2gjc_A Thiazole biosynthetic e 98.6 7.7E-08 2.6E-12 96.5 10.3 36 78-113 63-101 (326)
58 3i3l_A Alkylhalidase CMLS; fla 98.6 3.8E-08 1.3E-12 107.9 8.6 36 78-113 21-57 (591)
59 3qj4_A Renalase; FAD/NAD(P)-bi 98.6 1E-07 3.6E-12 97.5 9.3 33 81-113 2-38 (342)
60 3nrn_A Uncharacterized protein 98.6 4.5E-08 1.5E-12 103.3 6.6 35 82-116 2-37 (421)
61 2cul_A Glucose-inhibited divis 98.6 7.3E-08 2.5E-12 92.8 7.3 33 80-112 3-36 (232)
62 2bry_A NEDD9 interacting prote 98.5 4.7E-08 1.6E-12 105.3 4.8 36 78-113 90-126 (497)
63 4a9w_A Monooxygenase; baeyer-v 98.5 9.4E-08 3.2E-12 98.0 6.9 34 80-113 3-37 (357)
64 3cty_A Thioredoxin reductase; 98.5 3.4E-07 1.2E-11 92.5 11.0 65 252-325 197-262 (319)
65 3cp8_A TRNA uridine 5-carboxym 98.5 1E-07 3.4E-12 104.0 6.9 35 78-112 19-54 (641)
66 3ihg_A RDME; flavoenzyme, anth 98.5 3.2E-07 1.1E-11 99.9 10.8 37 78-114 3-40 (535)
67 2qa1_A PGAE, polyketide oxygen 98.5 6.7E-07 2.3E-11 96.3 13.0 39 76-114 7-46 (500)
68 3f8d_A Thioredoxin reductase ( 98.5 3.5E-06 1.2E-10 84.9 17.2 60 256-325 201-261 (323)
69 1yvv_A Amine oxidase, flavin-c 98.4 3.9E-07 1.3E-11 92.7 8.7 35 80-114 2-37 (336)
70 3rp8_A Flavoprotein monooxygen 98.4 1.3E-06 4.3E-11 91.7 12.0 36 78-113 21-57 (407)
71 2qa2_A CABE, polyketide oxygen 98.4 9.2E-07 3.1E-11 95.2 11.2 37 78-114 10-47 (499)
72 3c4n_A Uncharacterized protein 98.4 2.5E-07 8.5E-12 97.0 6.5 36 79-114 35-73 (405)
73 3itj_A Thioredoxin reductase 1 98.4 1.7E-06 5.9E-11 87.8 12.6 56 256-320 220-276 (338)
74 3gwf_A Cyclohexanone monooxyge 98.4 3E-07 1E-11 99.8 6.9 36 79-114 7-44 (540)
75 1k0i_A P-hydroxybenzoate hydro 98.4 3.1E-07 1.1E-11 95.8 6.7 33 80-112 2-35 (394)
76 2gv8_A Monooxygenase; FMO, FAD 98.4 1.6E-06 5.6E-11 92.0 11.9 36 79-114 5-43 (447)
77 2x3n_A Probable FAD-dependent 98.3 7.2E-07 2.4E-11 93.2 8.1 35 79-113 5-40 (399)
78 3fmw_A Oxygenase; mithramycin, 98.3 5.5E-07 1.9E-11 98.4 7.4 37 78-114 47-84 (570)
79 4ap3_A Steroid monooxygenase; 98.3 3.6E-07 1.2E-11 99.4 5.8 36 78-113 19-55 (549)
80 3lxd_A FAD-dependent pyridine 98.3 1.2E-06 4E-11 92.2 8.6 61 253-326 202-262 (415)
81 2r0c_A REBC; flavin adenine di 98.3 3.7E-06 1.3E-10 91.6 12.9 37 78-114 24-61 (549)
82 2vou_A 2,6-dihydroxypyridine h 98.3 4.1E-06 1.4E-10 87.4 12.5 35 79-113 4-39 (397)
83 3kkj_A Amine oxidase, flavin-c 98.3 3.1E-07 1.1E-11 90.0 3.4 35 80-114 2-37 (336)
84 3ab1_A Ferredoxin--NADP reduct 98.2 1.4E-06 4.7E-11 89.7 7.9 35 78-112 12-47 (360)
85 1w4x_A Phenylacetone monooxyge 98.2 1.9E-06 6.4E-11 93.9 9.1 37 78-114 14-51 (542)
86 2zbw_A Thioredoxin reductase; 98.2 2E-06 6.7E-11 87.5 8.5 34 79-112 4-38 (335)
87 1mo9_A ORF3; nucleotide bindin 98.2 1.1E-05 3.7E-10 87.4 14.7 66 251-325 261-327 (523)
88 2xve_A Flavin-containing monoo 98.2 3.5E-06 1.2E-10 89.9 10.0 34 81-114 3-43 (464)
89 3s5w_A L-ornithine 5-monooxyge 98.2 5.9E-06 2E-10 88.1 11.8 36 79-114 29-70 (463)
90 3uox_A Otemo; baeyer-villiger 98.2 2.7E-06 9.1E-11 92.5 8.4 36 78-113 7-43 (545)
91 3lzw_A Ferredoxin--NADP reduct 98.2 1.7E-06 5.9E-11 87.5 6.1 34 79-112 6-40 (332)
92 3r9u_A Thioredoxin reductase; 98.1 4.4E-05 1.5E-09 76.4 16.2 57 256-321 194-250 (315)
93 4fk1_A Putative thioredoxin re 98.1 8.2E-07 2.8E-11 89.1 3.3 35 78-112 4-39 (304)
94 3fg2_P Putative rubredoxin red 98.1 6.5E-06 2.2E-10 86.1 9.6 61 253-326 192-252 (404)
95 4gcm_A TRXR, thioredoxin reduc 98.1 1.2E-06 4E-11 88.2 3.2 34 79-112 5-39 (312)
96 2dkh_A 3-hydroxybenzoate hydro 98.0 6.8E-06 2.3E-10 91.2 8.7 37 78-114 30-68 (639)
97 3fpz_A Thiazole biosynthetic e 98.0 1.9E-06 6.3E-11 87.5 3.7 38 78-115 63-103 (326)
98 4a5l_A Thioredoxin reductase; 98.0 1.9E-06 6.4E-11 86.7 3.1 35 78-112 2-37 (314)
99 4gut_A Lysine-specific histone 98.0 2.9E-05 9.7E-10 87.5 12.3 38 79-116 335-373 (776)
100 2bcg_G Secretory pathway GDP d 98.0 2.9E-06 9.9E-11 90.2 4.0 41 78-118 9-50 (453)
101 4gde_A UDP-galactopyranose mut 97.9 3.5E-06 1.2E-10 91.0 3.5 39 78-116 8-48 (513)
102 2pyx_A Tryptophan halogenase; 97.9 1.1E-05 3.7E-10 87.5 7.1 35 79-113 6-53 (526)
103 3iwa_A FAD-dependent pyridine 97.8 0.00011 3.7E-09 78.5 13.1 60 252-325 209-268 (472)
104 1c0p_A D-amino acid oxidase; a 97.8 8.1E-06 2.8E-10 84.0 3.9 36 78-113 4-40 (363)
105 3urh_A Dihydrolipoyl dehydroge 97.8 7.3E-06 2.5E-10 88.1 3.0 39 77-115 22-61 (491)
106 3k7m_X 6-hydroxy-L-nicotine ox 97.8 7.6E-06 2.6E-10 86.3 3.1 35 81-115 2-37 (431)
107 3ef6_A Toluene 1,2-dioxygenase 97.8 3.9E-05 1.3E-09 80.4 8.1 60 253-326 193-252 (410)
108 3hdq_A UDP-galactopyranose mut 97.7 1.6E-05 5.4E-10 82.4 3.8 39 78-116 27-66 (397)
109 4b63_A L-ornithine N5 monooxyg 97.7 7.5E-05 2.6E-09 80.2 9.1 35 78-112 37-72 (501)
110 3g3e_A D-amino-acid oxidase; F 97.7 1.7E-05 5.7E-10 81.2 3.6 31 82-112 2-39 (351)
111 1d5t_A Guanine nucleotide diss 97.7 2.3E-05 8E-10 82.6 4.6 42 77-118 3-45 (433)
112 3lad_A Dihydrolipoamide dehydr 97.7 1.7E-05 5.9E-10 84.8 3.4 35 79-113 2-37 (476)
113 1v0j_A UDP-galactopyranose mut 97.6 2.1E-05 7.2E-10 82.0 3.8 39 78-116 5-45 (399)
114 1i8t_A UDP-galactopyranose mut 97.6 2E-05 6.9E-10 81.2 3.6 37 80-116 1-38 (367)
115 4b1b_A TRXR, thioredoxin reduc 97.6 2.1E-05 7.1E-10 85.0 3.7 34 79-112 41-75 (542)
116 3c96_A Flavin-containing monoo 97.6 2E-05 6.8E-10 82.5 3.4 36 79-114 3-40 (410)
117 1s3e_A Amine oxidase [flavin-c 97.6 2.1E-05 7.1E-10 85.2 3.4 38 79-116 3-41 (520)
118 3l8k_A Dihydrolipoyl dehydroge 97.6 1.7E-05 5.9E-10 84.5 2.6 38 78-115 2-40 (466)
119 2xdo_A TETX2 protein; tetracyc 97.6 2.9E-05 9.8E-10 81.0 4.0 36 78-113 24-60 (398)
120 2vvm_A Monoamine oxidase N; FA 97.6 2.5E-05 8.6E-10 83.9 3.6 39 78-116 37-76 (495)
121 2jae_A L-amino acid oxidase; o 97.6 3.5E-05 1.2E-09 82.7 4.5 40 78-117 9-49 (489)
122 3o0h_A Glutathione reductase; 97.6 2.6E-05 9E-10 83.5 3.5 33 79-111 25-58 (484)
123 2b9w_A Putative aminooxidase; 97.5 3.8E-05 1.3E-09 80.7 4.1 38 79-116 5-44 (424)
124 1rsg_A FMS1 protein; FAD bindi 97.5 2.6E-05 9E-10 84.3 2.8 39 79-117 7-47 (516)
125 3alj_A 2-methyl-3-hydroxypyrid 97.5 3.7E-05 1.3E-09 79.5 3.8 36 79-114 10-46 (379)
126 3i6d_A Protoporphyrinogen oxid 97.5 3E-05 1E-09 82.6 3.1 37 80-116 5-48 (470)
127 3dgz_A Thioredoxin reductase 2 97.5 3.1E-05 1.1E-09 83.1 2.9 34 78-111 4-38 (488)
128 2yg5_A Putrescine oxidase; oxi 97.5 3.2E-05 1.1E-09 82.0 3.0 38 79-116 4-42 (453)
129 2ivd_A PPO, PPOX, protoporphyr 97.5 3.6E-05 1.2E-09 82.3 3.4 39 78-116 14-53 (478)
130 3qfa_A Thioredoxin reductase 1 97.5 3.8E-05 1.3E-09 83.0 3.5 35 78-112 30-65 (519)
131 4dna_A Probable glutathione re 97.5 3.8E-05 1.3E-09 81.8 3.4 33 79-111 4-37 (463)
132 3dk9_A Grase, GR, glutathione 97.5 3.4E-05 1.2E-09 82.5 2.8 35 78-112 18-53 (478)
133 3dgh_A TRXR-1, thioredoxin red 97.5 3.9E-05 1.3E-09 82.2 3.2 34 78-111 7-41 (483)
134 3ic9_A Dihydrolipoamide dehydr 97.5 4.1E-05 1.4E-09 82.2 3.4 33 80-112 8-41 (492)
135 2e1m_A L-glutamate oxidase; L- 97.5 5.2E-05 1.8E-09 77.8 3.8 38 78-115 42-81 (376)
136 1sez_A Protoporphyrinogen oxid 97.5 5.2E-05 1.8E-09 81.6 4.0 39 78-116 11-50 (504)
137 2q7v_A Thioredoxin reductase; 97.4 4.6E-05 1.6E-09 76.9 3.0 34 78-111 6-40 (325)
138 2r9z_A Glutathione amide reduc 97.4 5.1E-05 1.7E-09 80.8 3.4 34 79-112 3-37 (463)
139 3ihm_A Styrene monooxygenase A 97.4 4.3E-05 1.5E-09 80.5 2.7 34 79-112 21-55 (430)
140 3ics_A Coenzyme A-disulfide re 97.4 0.00033 1.1E-08 76.9 9.9 35 79-113 35-72 (588)
141 1ges_A Glutathione reductase; 97.4 5.4E-05 1.8E-09 80.3 3.3 34 79-112 3-37 (450)
142 3nks_A Protoporphyrinogen oxid 97.4 5.7E-05 1.9E-09 80.7 3.5 36 81-116 3-41 (477)
143 2ywl_A Thioredoxin reductase r 97.4 6.3E-05 2.2E-09 68.8 3.2 32 81-112 2-34 (180)
144 3fbs_A Oxidoreductase; structu 97.4 6.2E-05 2.1E-09 74.6 3.2 33 80-112 2-35 (297)
145 2hqm_A GR, grase, glutathione 97.4 5.9E-05 2E-09 80.7 3.3 34 79-112 10-44 (479)
146 1ojt_A Surface protein; redox- 97.4 5.6E-05 1.9E-09 80.9 3.1 37 78-114 4-41 (482)
147 1v59_A Dihydrolipoamide dehydr 97.4 5.3E-05 1.8E-09 81.0 2.6 37 78-114 3-40 (478)
148 1zk7_A HGII, reductase, mercur 97.4 7.5E-05 2.6E-09 79.6 3.7 35 78-112 2-37 (467)
149 1dxl_A Dihydrolipoamide dehydr 97.4 9.5E-05 3.2E-09 78.9 4.2 38 79-116 5-43 (470)
150 3lov_A Protoporphyrinogen oxid 97.3 8.3E-05 2.8E-09 79.4 3.6 37 80-116 4-43 (475)
151 3klj_A NAD(FAD)-dependent dehy 97.3 0.00038 1.3E-08 72.0 8.3 36 78-113 7-43 (385)
152 2qae_A Lipoamide, dihydrolipoy 97.3 7.6E-05 2.6E-09 79.6 3.1 35 80-114 2-37 (468)
153 2bi7_A UDP-galactopyranose mut 97.3 0.00011 3.6E-09 76.2 3.9 37 80-116 3-40 (384)
154 3g5s_A Methylenetetrahydrofola 97.3 9.1E-05 3.1E-09 75.2 3.1 34 81-114 2-36 (443)
155 2yqu_A 2-oxoglutarate dehydrog 97.3 9.2E-05 3.1E-09 78.6 3.2 35 80-114 1-36 (455)
156 1trb_A Thioredoxin reductase; 97.3 7.4E-05 2.5E-09 75.1 2.3 33 79-111 4-37 (320)
157 3d1c_A Flavin-containing putat 97.3 9.6E-05 3.3E-09 75.9 3.2 34 79-112 3-38 (369)
158 1onf_A GR, grase, glutathione 97.3 0.0001 3.4E-09 79.3 3.4 33 80-112 2-35 (500)
159 2q0l_A TRXR, thioredoxin reduc 97.3 9.5E-05 3.3E-09 73.9 2.8 31 81-111 2-34 (311)
160 1ebd_A E3BD, dihydrolipoamide 97.3 0.0001 3.5E-09 78.3 3.0 33 79-111 2-35 (455)
161 2iid_A L-amino-acid oxidase; f 97.3 0.00013 4.5E-09 78.3 3.9 38 79-116 32-70 (498)
162 1fl2_A Alkyl hydroperoxide red 97.2 0.00011 3.7E-09 73.5 3.0 31 80-110 1-32 (310)
163 1vg0_A RAB proteins geranylger 97.2 0.00019 6.3E-09 78.4 4.9 42 78-119 6-48 (650)
164 1zmd_A Dihydrolipoyl dehydroge 97.2 0.00011 3.8E-09 78.4 3.1 36 79-114 5-41 (474)
165 1lvl_A Dihydrolipoamide dehydr 97.2 0.00012 4E-09 77.8 3.3 34 78-111 3-37 (458)
166 2a87_A TRXR, TR, thioredoxin r 97.2 0.0001 3.5E-09 74.7 2.6 34 78-111 12-46 (335)
167 2a8x_A Dihydrolipoyl dehydroge 97.2 0.0001 3.5E-09 78.4 2.7 32 80-111 3-35 (464)
168 4dsg_A UDP-galactopyranose mut 97.2 0.00014 4.8E-09 77.8 3.7 38 79-116 8-47 (484)
169 1vdc_A NTR, NADPH dependent th 97.1 0.00014 4.6E-09 73.6 2.5 32 79-110 7-39 (333)
170 2aqj_A Tryptophan halogenase, 97.1 0.00019 6.7E-09 77.8 3.7 35 79-113 4-42 (538)
171 2eq6_A Pyruvate dehydrogenase 97.1 0.00017 5.9E-09 76.7 3.1 33 80-112 6-39 (464)
172 1b37_A Protein (polyamine oxid 97.1 0.00018 6.2E-09 76.7 3.3 38 79-116 3-42 (472)
173 3k30_A Histamine dehydrogenase 97.1 0.00026 8.7E-09 79.3 4.3 38 78-115 389-427 (690)
174 4hb9_A Similarities with proba 97.1 0.00023 8E-09 74.0 3.7 33 82-114 3-36 (412)
175 2vdc_G Glutamate synthase [NAD 97.0 0.00044 1.5E-08 73.2 5.1 36 79-114 121-157 (456)
176 2wpf_A Trypanothione reductase 97.0 0.00027 9.3E-09 75.8 3.3 32 78-109 5-38 (495)
177 2x8g_A Thioredoxin glutathione 97.0 0.00024 8.3E-09 78.1 3.0 34 78-111 105-139 (598)
178 3c4a_A Probable tryptophan hyd 97.0 0.00029 9.9E-09 72.8 3.4 33 82-114 2-37 (381)
179 1fec_A Trypanothione reductase 97.0 0.00034 1.2E-08 75.0 3.6 30 80-109 3-34 (490)
180 2v3a_A Rubredoxin reductase; a 97.0 0.00035 1.2E-08 72.3 3.4 62 251-326 193-254 (384)
181 1q1r_A Putidaredoxin reductase 96.9 0.00036 1.2E-08 73.4 3.5 61 253-326 199-261 (431)
182 1hyu_A AHPF, alkyl hydroperoxi 96.9 0.00033 1.1E-08 75.7 3.2 33 78-110 210-243 (521)
183 2weu_A Tryptophan 5-halogenase 96.9 0.00027 9.4E-09 76.1 2.4 34 80-113 2-39 (511)
184 2e4g_A Tryptophan halogenase; 96.9 0.00043 1.5E-08 75.3 3.8 35 79-113 24-62 (550)
185 1pn0_A Phenol 2-monooxygenase; 96.9 0.00037 1.3E-08 77.5 2.9 35 79-113 7-47 (665)
186 1xdi_A RV3303C-LPDA; reductase 96.9 0.00041 1.4E-08 74.5 3.0 33 80-112 2-38 (499)
187 2bc0_A NADH oxidase; flavoprot 96.8 0.00052 1.8E-08 73.5 3.5 35 80-114 35-73 (490)
188 1ps9_A 2,4-dienoyl-COA reducta 96.8 0.00078 2.7E-08 75.1 4.5 38 79-116 372-410 (671)
189 1xhc_A NADH oxidase /nitrite r 96.8 0.00058 2E-08 70.2 3.2 35 79-114 7-42 (367)
190 2z3y_A Lysine-specific histone 96.7 0.00072 2.5E-08 75.2 3.9 39 78-116 105-144 (662)
191 2gag_A Heterotetrameric sarcos 96.7 0.00057 1.9E-08 79.3 3.1 63 254-324 325-392 (965)
192 2cdu_A NADPH oxidase; flavoenz 96.7 0.0007 2.4E-08 71.7 3.3 33 81-113 1-36 (452)
193 1y56_A Hypothetical protein PH 96.7 0.00064 2.2E-08 72.8 2.9 39 78-116 106-144 (493)
194 1o94_A Tmadh, trimethylamine d 96.7 0.00094 3.2E-08 75.1 4.4 38 79-116 388-426 (729)
195 3ab1_A Ferredoxin--NADP reduct 96.7 0.0053 1.8E-07 62.5 9.8 60 257-325 214-273 (360)
196 2gqw_A Ferredoxin reductase; f 96.7 0.00082 2.8E-08 70.1 3.5 36 79-114 6-44 (408)
197 1m6i_A Programmed cell death p 96.6 0.00098 3.3E-08 71.4 4.0 61 252-326 233-293 (493)
198 3kd9_A Coenzyme A disulfide re 96.6 0.00099 3.4E-08 70.4 3.8 36 80-115 3-41 (449)
199 2xag_A Lysine-specific histone 96.6 0.0012 4.3E-08 74.8 4.6 39 78-116 276-315 (852)
200 3oc4_A Oxidoreductase, pyridin 96.6 0.00099 3.4E-08 70.5 3.5 35 81-115 3-40 (452)
201 1fl2_A Alkyl hydroperoxide red 96.5 0.0074 2.5E-07 59.9 9.5 55 258-321 193-248 (310)
202 2v3a_A Rubredoxin reductase; a 96.5 0.013 4.3E-07 60.4 11.6 32 81-112 146-178 (384)
203 1trb_A Thioredoxin reductase; 96.5 0.0098 3.3E-07 59.3 10.1 57 256-321 195-253 (320)
204 3cgb_A Pyridine nucleotide-dis 96.5 0.0012 4E-08 70.5 3.2 35 80-114 36-73 (480)
205 1lqt_A FPRA; NADP+ derivative, 96.5 0.0014 4.7E-08 69.4 3.6 35 80-114 3-45 (456)
206 1nhp_A NADH peroxidase; oxidor 96.4 0.0013 4.4E-08 69.5 3.3 34 81-114 1-37 (447)
207 1cjc_A Protein (adrenodoxin re 96.4 0.0016 5.5E-08 68.9 3.8 37 79-115 5-44 (460)
208 1gte_A Dihydropyrimidine dehyd 96.3 0.0017 5.9E-08 75.8 3.8 37 79-115 186-224 (1025)
209 1q1r_A Putidaredoxin reductase 96.3 0.0094 3.2E-07 62.5 8.7 32 81-112 150-182 (431)
210 2eq6_A Pyruvate dehydrogenase 96.2 0.0076 2.6E-07 63.9 7.9 32 81-112 170-202 (464)
211 3sx6_A Sulfide-quinone reducta 96.2 0.0031 1.1E-07 66.3 4.6 34 81-114 5-42 (437)
212 1hyu_A AHPF, alkyl hydroperoxi 96.2 0.015 5.3E-07 62.4 10.1 55 258-321 404-459 (521)
213 3h28_A Sulfide-quinone reducta 96.2 0.0021 7.1E-08 67.5 3.1 35 81-115 3-40 (430)
214 3h8l_A NADH oxidase; membrane 96.1 0.0023 7.8E-08 66.7 3.2 33 82-114 3-39 (409)
215 2yqu_A 2-oxoglutarate dehydrog 96.1 0.0086 2.9E-07 63.3 7.7 32 81-112 168-200 (455)
216 2zbw_A Thioredoxin reductase; 96.0 0.026 8.9E-07 56.6 10.0 60 256-325 202-262 (335)
217 4eqs_A Coenzyme A disulfide re 95.9 0.0047 1.6E-07 64.9 4.4 32 83-114 3-37 (437)
218 1ges_A Glutathione reductase; 95.9 0.008 2.7E-07 63.4 6.0 32 81-112 168-200 (450)
219 3ic9_A Dihydrolipoamide dehydr 95.9 0.017 5.8E-07 61.6 8.6 32 81-112 175-207 (492)
220 2q0l_A TRXR, thioredoxin reduc 95.9 0.033 1.1E-06 55.1 10.3 58 257-323 191-249 (311)
221 1v59_A Dihydrolipoamide dehydr 95.8 0.013 4.3E-07 62.4 7.5 32 81-112 184-216 (478)
222 2qae_A Lipoamide, dihydrolipoy 95.8 0.014 4.9E-07 61.8 7.8 32 81-112 175-207 (468)
223 3ayj_A Pro-enzyme of L-phenyla 95.8 0.0032 1.1E-07 69.6 2.6 35 80-114 56-100 (721)
224 3ntd_A FAD-dependent pyridine 95.8 0.004 1.4E-07 67.8 3.5 33 82-114 3-38 (565)
225 3cgb_A Pyridine nucleotide-dis 95.8 0.012 4E-07 62.7 6.8 33 80-112 186-219 (480)
226 2hqm_A GR, grase, glutathione 95.7 0.0083 2.8E-07 63.8 5.5 32 81-112 186-218 (479)
227 3urh_A Dihydrolipoyl dehydroge 95.7 0.026 9E-07 60.1 9.3 32 81-112 199-231 (491)
228 2q7v_A Thioredoxin reductase; 95.7 0.047 1.6E-06 54.4 10.6 55 257-321 200-255 (325)
229 1ebd_A E3BD, dihydrolipoamide 95.7 0.018 6.1E-07 60.8 7.6 32 81-112 171-203 (455)
230 1zmd_A Dihydrolipoyl dehydroge 95.6 0.025 8.7E-07 59.9 8.7 32 81-112 179-211 (474)
231 2cdu_A NADPH oxidase; flavoenz 95.6 0.019 6.4E-07 60.5 7.5 31 82-112 151-182 (452)
232 3vrd_B FCCB subunit, flavocyto 95.5 0.0062 2.1E-07 63.1 3.3 57 255-326 212-268 (401)
233 4g6h_A Rotenone-insensitive NA 95.4 0.0086 3E-07 64.0 3.9 35 79-113 41-76 (502)
234 1vdc_A NTR, NADPH dependent th 95.4 0.08 2.7E-06 52.9 11.0 59 256-321 206-265 (333)
235 2r9z_A Glutathione amide reduc 95.3 0.032 1.1E-06 58.9 8.1 31 82-112 168-199 (463)
236 2a8x_A Dihydrolipoyl dehydroge 95.2 0.033 1.1E-06 58.8 7.9 32 81-112 172-204 (464)
237 1dxl_A Dihydrolipoamide dehydr 95.2 0.015 5.2E-07 61.6 5.2 32 81-112 178-210 (470)
238 1xdi_A RV3303C-LPDA; reductase 95.2 0.026 8.9E-07 60.3 7.0 32 81-112 183-215 (499)
239 3ntd_A FAD-dependent pyridine 95.2 0.06 2.1E-06 58.4 9.9 31 82-112 153-184 (565)
240 1onf_A GR, grase, glutathione 95.1 0.031 1.1E-06 59.7 7.4 31 82-112 178-209 (500)
241 1ojt_A Surface protein; redox- 95.1 0.038 1.3E-06 58.7 8.0 32 81-112 186-218 (482)
242 3lzw_A Ferredoxin--NADP reduct 95.0 0.05 1.7E-06 54.2 8.3 59 257-325 201-260 (332)
243 3o0h_A Glutathione reductase; 94.9 0.03 1E-06 59.5 6.5 32 81-112 192-224 (484)
244 3lad_A Dihydrolipoamide dehydr 94.9 0.058 2E-06 57.2 8.5 32 81-112 181-213 (476)
245 2bc0_A NADH oxidase; flavoprot 94.8 0.035 1.2E-06 59.1 6.7 32 81-112 195-227 (490)
246 3dk9_A Grase, GR, glutathione 94.8 0.073 2.5E-06 56.4 9.1 32 81-112 188-220 (478)
247 3hyw_A Sulfide-quinone reducta 94.7 0.013 4.5E-07 61.3 3.1 56 255-325 210-265 (430)
248 3dgz_A Thioredoxin reductase 2 94.5 0.097 3.3E-06 55.6 9.3 31 82-112 187-218 (488)
249 3dgh_A TRXR-1, thioredoxin red 94.5 0.1 3.4E-06 55.4 9.3 56 256-320 238-294 (483)
250 4dna_A Probable glutathione re 94.5 0.032 1.1E-06 58.9 5.3 32 81-112 171-203 (463)
251 1m6i_A Programmed cell death p 94.4 0.09 3.1E-06 56.0 8.7 31 82-112 182-217 (493)
252 3ics_A Coenzyme A-disulfide re 94.3 0.06 2E-06 58.8 7.1 31 82-112 189-220 (588)
253 2wpf_A Trypanothione reductase 94.2 0.069 2.4E-06 56.9 7.2 57 256-325 246-304 (495)
254 3oc4_A Oxidoreductase, pyridin 94.2 0.14 4.8E-06 53.8 9.5 32 81-112 148-180 (452)
255 3s5w_A L-ornithine 5-monooxyge 94.1 0.18 6.3E-06 52.9 10.4 51 256-316 327-378 (463)
256 1fec_A Trypanothione reductase 94.0 0.068 2.3E-06 56.9 6.7 32 81-112 188-223 (490)
257 1gte_A Dihydropyrimidine dehyd 93.4 0.22 7.4E-06 58.1 9.9 31 82-112 334-366 (1025)
258 2gag_A Heterotetrameric sarcos 93.2 0.2 6.9E-06 57.9 9.2 31 82-112 286-317 (965)
259 4g6h_A Rotenone-insensitive NA 93.0 0.1 3.6E-06 55.6 6.1 51 256-318 283-335 (502)
260 4b1b_A TRXR, thioredoxin reduc 91.9 0.46 1.6E-05 51.0 9.3 30 82-111 225-255 (542)
261 1nhp_A NADH peroxidase; oxidor 91.2 0.11 3.8E-06 54.4 3.5 35 79-113 148-183 (447)
262 4gcm_A TRXR, thioredoxin reduc 90.0 0.18 6.1E-06 49.8 3.6 33 82-114 147-180 (312)
263 3fwz_A Inner membrane protein 89.9 0.17 5.7E-06 43.5 2.9 32 81-112 8-40 (140)
264 3klj_A NAD(FAD)-dependent dehy 89.7 0.17 6E-06 51.8 3.3 33 82-114 148-181 (385)
265 3llv_A Exopolyphosphatase-rela 89.4 0.19 6.5E-06 43.1 2.9 31 82-112 8-39 (141)
266 3k30_A Histamine dehydrogenase 89.4 0.65 2.2E-05 51.6 8.0 31 82-112 525-558 (690)
267 2g1u_A Hypothetical protein TM 89.3 0.21 7E-06 43.8 3.1 32 81-112 20-52 (155)
268 1lvl_A Dihydrolipoamide dehydr 88.8 0.22 7.4E-06 52.4 3.4 34 81-114 172-206 (458)
269 1lss_A TRK system potassium up 88.8 0.24 8.1E-06 42.1 3.1 31 82-112 6-37 (140)
270 4a5l_A Thioredoxin reductase; 88.0 0.29 1E-05 48.1 3.6 33 81-113 153-186 (314)
271 1id1_A Putative potassium chan 87.9 0.27 9.4E-06 42.8 2.9 30 82-111 5-35 (153)
272 1xhc_A NADH oxidase /nitrite r 87.4 0.26 9E-06 50.1 2.8 33 81-113 144-177 (367)
273 2a9f_A Putative malic enzyme ( 87.3 0.65 2.2E-05 47.0 5.5 34 79-112 187-222 (398)
274 2hmt_A YUAA protein; RCK, KTN, 85.5 0.41 1.4E-05 40.7 2.7 31 82-112 8-39 (144)
275 3ic5_A Putative saccharopine d 85.4 0.43 1.5E-05 39.0 2.7 31 82-112 7-39 (118)
276 2gqw_A Ferredoxin reductase; f 85.1 0.49 1.7E-05 48.8 3.6 34 81-114 146-180 (408)
277 2xve_A Flavin-containing monoo 84.0 0.67 2.3E-05 48.7 4.0 31 82-112 199-230 (464)
278 3d1c_A Flavin-containing putat 83.7 0.52 1.8E-05 47.5 2.9 32 82-113 168-200 (369)
279 2gv8_A Monooxygenase; FMO, FAD 83.5 0.61 2.1E-05 48.7 3.4 31 82-112 214-246 (447)
280 4eqs_A Coenzyme A disulfide re 83.4 1.2 4E-05 46.4 5.5 33 82-114 149-182 (437)
281 2bcg_G Secretory pathway GDP d 82.4 0.85 2.9E-05 47.7 4.0 60 241-314 238-299 (453)
282 3kd9_A Coenzyme A disulfide re 82.0 0.78 2.7E-05 47.9 3.5 33 82-114 150-183 (449)
283 3uox_A Otemo; baeyer-villiger 81.8 0.8 2.7E-05 49.2 3.6 33 81-113 186-219 (545)
284 3ef6_A Toluene 1,2-dioxygenase 81.5 0.81 2.8E-05 47.2 3.4 34 81-114 144-178 (410)
285 3l4b_C TRKA K+ channel protien 81.3 0.63 2.1E-05 43.2 2.2 30 83-112 3-33 (218)
286 3gwf_A Cyclohexanone monooxyge 81.2 0.86 2.9E-05 48.9 3.6 33 81-113 179-212 (540)
287 1vl6_A Malate oxidoreductase; 81.0 1.7 5.7E-05 43.9 5.3 33 80-112 192-226 (388)
288 4ap3_A Steroid monooxygenase; 80.6 0.88 3E-05 48.9 3.4 33 81-113 192-225 (549)
289 2a87_A TRXR, TR, thioredoxin r 79.9 1.1 3.7E-05 44.6 3.6 32 81-112 156-188 (335)
290 1zk7_A HGII, reductase, mercur 79.8 0.99 3.4E-05 47.4 3.4 34 81-114 177-211 (467)
291 3hn2_A 2-dehydropantoate 2-red 79.5 1.3 4.4E-05 43.8 3.9 31 82-112 4-35 (312)
292 3lxd_A FAD-dependent pyridine 78.2 1.3 4.3E-05 45.7 3.6 34 81-114 153-187 (415)
293 1kyq_A Met8P, siroheme biosynt 78.0 0.93 3.2E-05 43.7 2.3 32 81-112 14-46 (274)
294 3fg2_P Putative rubredoxin red 77.9 1.2 4.2E-05 45.6 3.4 33 82-114 144-177 (404)
295 3cty_A Thioredoxin reductase; 77.9 1.3 4.3E-05 43.6 3.4 33 82-114 157-190 (319)
296 3itj_A Thioredoxin reductase 1 77.7 1.4 4.7E-05 43.6 3.6 34 81-114 174-208 (338)
297 3dfz_A SIRC, precorrin-2 dehyd 77.6 1.3 4.4E-05 41.3 3.1 31 81-111 32-63 (223)
298 3i83_A 2-dehydropantoate 2-red 77.4 1.2 4.3E-05 44.0 3.1 31 82-112 4-35 (320)
299 1d5t_A Guanine nucleotide diss 77.4 0.92 3.1E-05 47.1 2.2 61 240-314 229-289 (433)
300 3l8k_A Dihydrolipoyl dehydroge 77.4 1.3 4.4E-05 46.5 3.4 34 81-114 173-207 (466)
301 2x8g_A Thioredoxin glutathione 77.3 1.1 3.9E-05 48.6 3.0 30 82-111 288-318 (598)
302 4g65_A TRK system potassium up 76.6 1.1 3.8E-05 46.9 2.6 31 82-112 5-36 (461)
303 3nv9_A Malic enzyme; rossmann 76.1 2.3 8E-05 43.6 4.6 33 80-112 219-255 (487)
304 3fbs_A Oxidoreductase; structu 76.0 2.1 7.1E-05 41.3 4.3 31 81-112 142-173 (297)
305 1jw9_B Molybdopterin biosynthe 75.9 1.4 4.8E-05 41.9 2.9 33 80-112 31-65 (249)
306 3c85_A Putative glutathione-re 75.6 1.5 5.2E-05 39.2 2.9 31 82-112 41-73 (183)
307 1vg0_A RAB proteins geranylger 75.3 2.8 9.7E-05 45.6 5.4 61 240-312 373-434 (650)
308 3ado_A Lambda-crystallin; L-gu 75.2 1.4 4.7E-05 43.6 2.7 31 82-112 8-39 (319)
309 3g17_A Similar to 2-dehydropan 74.7 1.5 5.1E-05 42.8 2.8 31 82-112 4-35 (294)
310 3oj0_A Glutr, glutamyl-tRNA re 74.2 1.3 4.4E-05 38.0 1.9 31 82-112 23-54 (144)
311 4e12_A Diketoreductase; oxidor 73.4 1.7 5.9E-05 42.1 2.9 31 82-112 6-37 (283)
312 1mo9_A ORF3; nucleotide bindin 73.3 1.9 6.5E-05 46.0 3.4 34 81-114 215-249 (523)
313 1f0y_A HCDH, L-3-hydroxyacyl-C 73.3 1.7 5.9E-05 42.5 2.9 31 82-112 17-48 (302)
314 3f8d_A Thioredoxin reductase ( 73.0 2.1 7E-05 41.9 3.4 35 81-115 155-190 (323)
315 3lk7_A UDP-N-acetylmuramoylala 72.9 2.6 9E-05 43.9 4.3 31 82-112 11-42 (451)
316 3l9w_A Glutathione-regulated p 72.9 1.8 6E-05 44.7 2.9 31 82-112 6-37 (413)
317 3rui_A Ubiquitin-like modifier 72.7 2.4 8.2E-05 42.1 3.7 35 80-114 34-70 (340)
318 3ghy_A Ketopantoate reductase 72.4 1.8 6E-05 43.2 2.7 30 82-111 5-35 (335)
319 2raf_A Putative dinucleotide-b 72.4 2.1 7.4E-05 39.3 3.1 32 81-112 20-52 (209)
320 1ks9_A KPA reductase;, 2-dehyd 72.3 2.1 7.1E-05 41.4 3.2 30 83-112 3-33 (291)
321 4dio_A NAD(P) transhydrogenase 72.3 2 7E-05 43.7 3.2 32 81-112 191-223 (405)
322 1nyt_A Shikimate 5-dehydrogena 71.5 2.1 7E-05 41.3 2.9 30 82-111 121-151 (271)
323 3qfa_A Thioredoxin reductase 1 71.4 2 6.8E-05 45.8 3.0 30 82-111 212-242 (519)
324 1lld_A L-lactate dehydrogenase 70.7 2.1 7.3E-05 42.2 2.9 31 82-112 9-42 (319)
325 2y0c_A BCEC, UDP-glucose dehyd 70.5 2.1 7.2E-05 45.0 2.9 33 80-112 8-41 (478)
326 3ond_A Adenosylhomocysteinase; 70.4 2.2 7.4E-05 44.6 2.9 31 82-112 267-298 (488)
327 3p2y_A Alanine dehydrogenase/p 70.2 2.2 7.6E-05 43.1 2.9 32 81-112 185-217 (381)
328 1mv8_A GMD, GDP-mannose 6-dehy 70.0 2.9 0.0001 43.3 3.9 30 83-112 3-33 (436)
329 3r9u_A Thioredoxin reductase; 69.6 2.7 9.4E-05 40.8 3.4 34 81-114 148-182 (315)
330 2ew2_A 2-dehydropantoate 2-red 69.5 2.3 8E-05 41.6 2.9 31 82-112 5-36 (316)
331 1pjc_A Protein (L-alanine dehy 69.4 2.5 8.5E-05 42.7 3.1 32 81-112 168-200 (361)
332 4a9w_A Monooxygenase; baeyer-v 69.1 2.7 9.1E-05 41.7 3.2 31 81-112 164-195 (357)
333 1zud_1 Adenylyltransferase THI 68.7 3.6 0.00012 39.1 3.9 33 80-112 28-62 (251)
334 3hwr_A 2-dehydropantoate 2-red 68.7 2.5 8.4E-05 41.8 2.9 29 82-111 21-50 (318)
335 2eez_A Alanine dehydrogenase; 68.5 2.6 9E-05 42.6 3.1 31 82-112 168-199 (369)
336 2vdc_G Glutamate synthase [NAD 68.4 2.5 8.4E-05 44.2 2.9 32 81-112 265-298 (456)
337 1x13_A NAD(P) transhydrogenase 68.4 2.5 8.6E-05 43.3 2.9 32 81-112 173-205 (401)
338 2aef_A Calcium-gated potassium 68.3 2 6.9E-05 40.1 2.0 30 82-112 11-41 (234)
339 3nks_A Protoporphyrinogen oxid 67.6 1.8 6.2E-05 45.3 1.7 65 241-319 230-294 (477)
340 2x5o_A UDP-N-acetylmuramoylala 67.6 2.1 7.3E-05 44.4 2.2 32 82-113 7-39 (439)
341 1cjc_A Protein (adrenodoxin re 67.3 3.1 0.0001 43.5 3.3 54 257-317 269-335 (460)
342 2ywl_A Thioredoxin reductase r 67.1 6.5 0.00022 34.6 5.1 55 253-325 64-118 (180)
343 1jay_A Coenzyme F420H2:NADP+ o 66.8 3.4 0.00012 37.8 3.2 30 83-112 3-34 (212)
344 3phh_A Shikimate dehydrogenase 66.4 3.1 0.00011 39.9 2.9 32 81-112 119-151 (269)
345 1txg_A Glycerol-3-phosphate de 66.3 3 0.0001 41.3 2.9 28 83-110 3-31 (335)
346 2ewd_A Lactate dehydrogenase,; 66.2 3.8 0.00013 40.4 3.7 32 81-112 5-38 (317)
347 3h8v_A Ubiquitin-like modifier 66.0 3.1 0.00011 40.4 2.9 34 79-112 35-70 (292)
348 3vtf_A UDP-glucose 6-dehydroge 65.9 3 0.0001 43.2 2.8 33 80-112 21-54 (444)
349 1pzg_A LDH, lactate dehydrogen 65.9 3.1 0.00011 41.4 2.9 32 81-112 10-43 (331)
350 1l7d_A Nicotinamide nucleotide 65.9 3.2 0.00011 42.2 3.1 32 81-112 173-205 (384)
351 3gg2_A Sugar dehydrogenase, UD 65.5 3.1 0.00011 43.4 2.9 31 82-112 4-35 (450)
352 1o94_A Tmadh, trimethylamine d 65.5 3.4 0.00012 46.0 3.4 31 82-112 530-563 (729)
353 2vhw_A Alanine dehydrogenase; 65.4 3.3 0.00011 42.0 3.1 32 81-112 169-201 (377)
354 2vvm_A Monoamine oxidase N; FA 65.3 8.2 0.00028 40.4 6.3 60 241-314 251-311 (495)
355 3fbt_A Chorismate mutase and s 64.9 4.8 0.00017 38.9 4.0 32 81-112 123-156 (282)
356 2v6b_A L-LDH, L-lactate dehydr 64.8 3.4 0.00012 40.5 2.9 30 83-112 3-35 (304)
357 1bg6_A N-(1-D-carboxylethyl)-L 64.4 3.5 0.00012 41.3 3.0 31 82-112 6-37 (359)
358 1p77_A Shikimate 5-dehydrogena 64.4 2.7 9.1E-05 40.5 2.0 31 82-112 121-152 (272)
359 3vh1_A Ubiquitin-like modifier 63.9 4.6 0.00016 43.2 3.9 34 80-113 327-362 (598)
360 1nvt_A Shikimate 5'-dehydrogen 63.6 3.8 0.00013 39.7 3.0 29 82-111 130-159 (287)
361 2egg_A AROE, shikimate 5-dehyd 63.5 4 0.00014 39.9 3.1 31 82-112 143-175 (297)
362 2dpo_A L-gulonate 3-dehydrogen 63.3 3.6 0.00012 40.7 2.7 31 82-112 8-39 (319)
363 2vns_A Metalloreductase steap3 63.2 3.9 0.00013 37.7 2.9 31 82-112 30-61 (215)
364 3tnl_A Shikimate dehydrogenase 63.1 4 0.00014 40.2 3.1 31 81-111 155-187 (315)
365 1zcj_A Peroxisomal bifunctiona 63.0 3.8 0.00013 42.8 3.1 31 82-112 39-70 (463)
366 1lu9_A Methylene tetrahydromet 62.9 4 0.00014 39.6 3.0 30 82-111 121-152 (287)
367 3e8x_A Putative NAD-dependent 62.9 4.2 0.00014 37.8 3.1 31 82-112 23-55 (236)
368 1pj3_A NAD-dependent malic enz 62.8 5.6 0.00019 41.9 4.2 33 80-112 284-328 (564)
369 3ego_A Probable 2-dehydropanto 62.5 4.4 0.00015 39.7 3.2 31 82-112 4-34 (307)
370 4gsl_A Ubiquitin-like modifier 62.2 4.4 0.00015 43.5 3.3 35 80-114 326-362 (615)
371 2weu_A Tryptophan 5-halogenase 62.2 6 0.00021 41.8 4.5 52 251-315 179-230 (511)
372 3o38_A Short chain dehydrogena 62.0 4.3 0.00015 38.6 3.0 30 83-112 25-57 (266)
373 3d4o_A Dipicolinate synthase s 61.9 4.3 0.00015 39.5 3.1 31 82-112 157-188 (293)
374 2hjr_A Malate dehydrogenase; m 61.9 4.1 0.00014 40.4 2.9 31 82-112 16-48 (328)
375 3iwa_A FAD-dependent pyridine 61.8 4.5 0.00015 42.3 3.4 34 81-114 160-195 (472)
376 3k96_A Glycerol-3-phosphate de 61.8 4.1 0.00014 40.9 2.9 32 81-112 30-62 (356)
377 1z82_A Glycerol-3-phosphate de 61.5 4.3 0.00015 40.3 3.0 35 78-112 12-47 (335)
378 1leh_A Leucine dehydrogenase; 61.5 4.2 0.00014 40.9 2.9 29 82-110 175-204 (364)
379 3jyo_A Quinate/shikimate dehyd 61.5 4.3 0.00015 39.3 2.9 32 81-112 128-161 (283)
380 3qha_A Putative oxidoreductase 61.4 6.6 0.00023 38.1 4.3 32 81-112 16-48 (296)
381 1evy_A Glycerol-3-phosphate de 60.9 3.8 0.00013 41.2 2.6 31 82-112 17-48 (366)
382 1w4x_A Phenylacetone monooxyge 60.9 5 0.00017 42.8 3.6 33 82-114 188-221 (542)
383 3pdu_A 3-hydroxyisobutyrate de 60.7 5.6 0.00019 38.4 3.6 31 82-112 3-34 (287)
384 3don_A Shikimate dehydrogenase 60.6 4.3 0.00015 39.1 2.7 32 81-112 118-151 (277)
385 3h5n_A MCCB protein; ubiquitin 60.6 4.7 0.00016 40.4 3.1 33 80-112 118-152 (353)
386 3ojo_A CAP5O; rossmann fold, c 60.5 5 0.00017 41.4 3.4 32 81-112 12-44 (431)
387 2rir_A Dipicolinate synthase, 60.5 4.7 0.00016 39.3 3.1 31 82-112 159-190 (300)
388 2h78_A Hibadh, 3-hydroxyisobut 60.4 6.1 0.00021 38.5 3.9 31 82-112 5-36 (302)
389 4dll_A 2-hydroxy-3-oxopropiona 60.4 6.1 0.00021 38.9 3.9 31 82-112 33-64 (320)
390 3dtt_A NADP oxidoreductase; st 60.2 5 0.00017 37.8 3.1 33 80-112 19-52 (245)
391 2e4g_A Tryptophan halogenase; 59.7 5.6 0.00019 42.6 3.7 52 251-315 200-252 (550)
392 3k6j_A Protein F01G10.3, confi 59.6 7.5 0.00026 40.4 4.5 31 82-112 56-87 (460)
393 1a5z_A L-lactate dehydrogenase 59.4 4.8 0.00016 39.7 2.9 30 83-112 3-35 (319)
394 1c1d_A L-phenylalanine dehydro 59.3 4.8 0.00016 40.3 2.8 30 81-110 176-206 (355)
395 2hk9_A Shikimate dehydrogenase 59.2 5 0.00017 38.6 2.9 31 82-112 131-162 (275)
396 3gvp_A Adenosylhomocysteinase 59.1 4.9 0.00017 41.2 2.9 32 81-112 221-253 (435)
397 3eag_A UDP-N-acetylmuramate:L- 59.0 6.8 0.00023 38.7 4.0 31 82-112 6-38 (326)
398 3u62_A Shikimate dehydrogenase 58.9 5.1 0.00018 38.0 2.9 31 82-112 110-142 (253)
399 3t4e_A Quinate/shikimate dehyd 58.8 5.3 0.00018 39.2 3.1 31 81-111 149-181 (312)
400 3gpi_A NAD-dependent epimerase 58.6 5.5 0.00019 38.2 3.1 31 82-112 5-36 (286)
401 3o8q_A Shikimate 5-dehydrogena 58.1 6 0.0002 38.2 3.3 32 81-112 127-160 (281)
402 3ius_A Uncharacterized conserv 58.0 6 0.00021 37.9 3.3 31 82-112 7-38 (286)
403 1vpd_A Tartronate semialdehyde 57.8 7.1 0.00024 37.8 3.9 31 82-112 7-38 (299)
404 2pv7_A T-protein [includes: ch 57.7 5.7 0.0002 38.7 3.1 31 82-112 23-55 (298)
405 3ew7_A LMO0794 protein; Q8Y8U8 57.6 6.2 0.00021 35.9 3.2 30 83-112 3-34 (221)
406 4ffl_A PYLC; amino acid, biosy 57.6 6.2 0.00021 39.6 3.4 31 83-113 4-35 (363)
407 1dlj_A UDP-glucose dehydrogena 57.3 5.7 0.00019 40.6 3.1 30 83-112 3-32 (402)
408 4gx0_A TRKA domain protein; me 57.3 6 0.0002 42.5 3.4 34 81-114 349-383 (565)
409 1hyh_A L-hicdh, L-2-hydroxyiso 57.3 5.5 0.00019 39.0 2.9 31 82-112 3-36 (309)
410 3pwz_A Shikimate dehydrogenase 57.2 5.7 0.00019 38.2 2.9 31 81-111 121-153 (272)
411 3cky_A 2-hydroxymethyl glutara 57.2 7.8 0.00027 37.6 4.0 32 81-112 5-37 (301)
412 3pid_A UDP-glucose 6-dehydroge 56.9 5.9 0.0002 40.8 3.1 32 81-112 37-68 (432)
413 1pjq_A CYSG, siroheme synthase 56.9 5.5 0.00019 41.5 3.0 30 82-111 14-44 (457)
414 3g0o_A 3-hydroxyisobutyrate de 56.8 5.6 0.00019 38.8 2.9 32 81-112 8-40 (303)
415 2o7s_A DHQ-SDH PR, bifunctiona 56.8 5 0.00017 42.6 2.7 30 82-111 366-396 (523)
416 3doj_A AT3G25530, dehydrogenas 56.7 6.6 0.00023 38.4 3.4 32 81-112 22-54 (310)
417 3pef_A 6-phosphogluconate dehy 56.7 5.7 0.0002 38.3 2.9 31 82-112 3-34 (287)
418 3h2s_A Putative NADH-flavin re 56.7 6.1 0.00021 36.1 3.0 30 83-112 3-34 (224)
419 4a7p_A UDP-glucose dehydrogena 56.5 5.9 0.0002 41.1 3.1 34 79-112 7-41 (446)
420 1gq2_A Malic enzyme; oxidoredu 56.5 9.5 0.00032 40.0 4.6 33 80-112 282-326 (555)
421 1npy_A Hypothetical shikimate 56.4 7.5 0.00026 37.3 3.6 30 82-111 121-152 (271)
422 1guz_A Malate dehydrogenase; o 56.1 6.4 0.00022 38.6 3.2 30 83-112 3-35 (310)
423 2gf2_A Hibadh, 3-hydroxyisobut 56.1 8.2 0.00028 37.3 4.0 30 83-112 3-33 (296)
424 2aqj_A Tryptophan halogenase, 56.0 9.7 0.00033 40.5 4.8 52 251-315 171-222 (538)
425 3dfu_A Uncharacterized protein 55.9 4.9 0.00017 37.6 2.1 29 82-110 8-37 (232)
426 2dvm_A Malic enzyme, 439AA lon 55.8 5.6 0.00019 41.0 2.7 28 82-109 188-219 (439)
427 1t2d_A LDH-P, L-lactate dehydr 55.8 6.7 0.00023 38.7 3.3 31 82-112 6-38 (322)
428 3tl2_A Malate dehydrogenase; c 55.7 6.1 0.00021 38.9 2.9 30 82-111 10-41 (315)
429 1hdo_A Biliverdin IX beta redu 55.6 6.4 0.00022 35.3 2.9 30 83-112 6-37 (206)
430 3ce6_A Adenosylhomocysteinase; 55.4 6 0.0002 41.6 2.9 31 82-112 276-307 (494)
431 1yj8_A Glycerol-3-phosphate de 55.4 5.7 0.00019 40.1 2.7 32 82-113 23-62 (375)
432 2f1k_A Prephenate dehydrogenas 55.3 6.2 0.00021 37.8 2.9 30 83-112 3-33 (279)
433 1o0s_A NAD-ME, NAD-dependent m 55.3 8.5 0.00029 40.7 4.0 33 80-112 320-364 (605)
434 1ff9_A Saccharopine reductase; 55.1 9 0.00031 39.8 4.2 30 82-111 5-35 (450)
435 1tt5_B Ubiquitin-activating en 55.0 7.1 0.00024 40.3 3.4 33 80-112 40-74 (434)
436 1x0v_A GPD-C, GPDH-C, glycerol 54.8 5.5 0.00019 39.8 2.5 32 82-113 10-49 (354)
437 2pd4_A Enoyl-[acyl-carrier-pro 54.8 9.6 0.00033 36.4 4.2 30 83-112 9-42 (275)
438 1yqg_A Pyrroline-5-carboxylate 54.8 6.5 0.00022 37.2 2.9 30 83-112 3-34 (263)
439 4ezb_A Uncharacterized conserv 54.6 6.9 0.00024 38.5 3.1 31 82-112 26-58 (317)
440 3n58_A Adenosylhomocysteinase; 54.4 6.5 0.00022 40.4 2.9 31 82-112 249-280 (464)
441 4g65_A TRK system potassium up 54.1 7.2 0.00024 40.7 3.3 31 82-112 237-267 (461)
442 3mog_A Probable 3-hydroxybutyr 53.8 6.2 0.00021 41.4 2.7 31 82-112 7-38 (483)
443 1y8q_A Ubiquitin-like 1 activa 53.5 6.8 0.00023 39.1 2.9 33 80-112 36-70 (346)
444 1edz_A 5,10-methylenetetrahydr 53.3 11 0.00036 37.1 4.1 32 80-111 177-210 (320)
445 1ur5_A Malate dehydrogenase; o 53.2 7 0.00024 38.3 2.9 31 82-112 4-36 (309)
446 2uyy_A N-PAC protein; long-cha 53.0 6.7 0.00023 38.4 2.7 32 81-112 31-63 (316)
447 3dqp_A Oxidoreductase YLBE; al 52.9 8 0.00027 35.3 3.1 30 83-112 3-34 (219)
448 2h7i_A Enoyl-[acyl-carrier-pro 52.9 8.8 0.0003 36.5 3.5 30 83-112 10-43 (269)
449 1pqw_A Polyketide synthase; ro 52.8 6.2 0.00021 35.5 2.3 31 82-112 41-73 (198)
450 1lqt_A FPRA; NADP+ derivative, 52.8 7.9 0.00027 40.3 3.4 50 258-317 265-328 (456)
451 3g79_A NDP-N-acetyl-D-galactos 52.5 10 0.00035 39.6 4.1 32 82-113 20-54 (478)
452 3c7a_A Octopine dehydrogenase; 52.4 6.7 0.00023 40.0 2.7 28 82-109 4-33 (404)
453 4huj_A Uncharacterized protein 52.3 4.1 0.00014 37.7 1.0 32 81-112 24-57 (220)
454 3r6d_A NAD-dependent epimerase 52.2 8 0.00027 35.4 3.0 30 83-112 8-40 (221)
455 2d5c_A AROE, shikimate 5-dehyd 52.1 7.2 0.00025 37.1 2.7 31 82-112 118-149 (263)
456 1y56_A Hypothetical protein PH 52.0 5.9 0.0002 41.7 2.3 58 254-325 266-323 (493)
457 2dkn_A 3-alpha-hydroxysteroid 52.0 8.6 0.00029 35.9 3.2 30 83-112 4-35 (255)
458 2g5c_A Prephenate dehydrogenas 51.8 7.5 0.00026 37.3 2.9 30 83-112 4-36 (281)
459 3k31_A Enoyl-(acyl-carrier-pro 51.8 9.9 0.00034 36.8 3.7 29 83-111 33-65 (296)
460 2wyu_A Enoyl-[acyl carrier pro 51.6 9.8 0.00034 36.0 3.6 30 83-112 11-44 (261)
461 3qsg_A NAD-binding phosphogluc 51.3 7.8 0.00027 38.0 2.9 31 81-111 25-57 (312)
462 1b37_A Protein (polyamine oxid 51.2 17 0.00057 37.8 5.6 41 259-313 228-268 (472)
463 3c24_A Putative oxidoreductase 51.2 7.9 0.00027 37.3 2.9 31 82-112 13-45 (286)
464 3h9u_A Adenosylhomocysteinase; 51.1 7.9 0.00027 39.7 2.9 32 81-112 212-244 (436)
465 3pqe_A L-LDH, L-lactate dehydr 50.8 8.1 0.00028 38.2 2.9 30 82-111 7-39 (326)
466 4fs3_A Enoyl-[acyl-carrier-pro 50.8 11 0.00037 35.7 3.7 30 83-112 9-42 (256)
467 2o2s_A Enoyl-acyl carrier redu 50.6 11 0.00037 36.9 3.9 28 83-110 12-43 (315)
468 1gpj_A Glutamyl-tRNA reductase 50.6 8 0.00027 39.5 2.9 31 82-112 169-201 (404)
469 1oju_A MDH, malate dehydrogena 50.1 8.6 0.00029 37.4 2.9 30 83-112 3-35 (294)
470 1qsg_A Enoyl-[acyl-carrier-pro 49.9 11 0.00036 35.8 3.5 30 83-112 12-45 (265)
471 3ggo_A Prephenate dehydrogenas 49.5 8.6 0.00029 37.8 2.9 31 82-112 35-68 (314)
472 3n74_A 3-ketoacyl-(acyl-carrie 48.9 12 0.0004 35.3 3.7 30 83-112 12-43 (261)
473 4a26_A Putative C-1-tetrahydro 48.9 13 0.00044 36.1 3.9 32 80-111 165-198 (300)
474 1yb4_A Tartronic semialdehyde 48.8 9.6 0.00033 36.7 3.1 28 82-109 5-33 (295)
475 3i6d_A Protoporphyrinogen oxid 48.5 19 0.00064 37.1 5.5 47 260-320 248-294 (470)
476 1y8q_B Anthracycline-, ubiquit 48.4 9.1 0.00031 41.4 3.0 33 80-112 17-51 (640)
477 3gvi_A Malate dehydrogenase; N 48.4 9.3 0.00032 37.7 2.9 32 81-112 8-41 (324)
478 3oig_A Enoyl-[acyl-carrier-pro 48.3 12 0.00041 35.4 3.7 29 83-111 10-42 (266)
479 3t7c_A Carveol dehydrogenase; 48.3 14 0.00048 35.8 4.2 30 83-112 31-62 (299)
480 3qvo_A NMRA family protein; st 48.2 9.3 0.00032 35.4 2.8 31 82-112 25-58 (236)
481 2p91_A Enoyl-[acyl-carrier-pro 48.2 11 0.00036 36.3 3.3 30 83-112 24-57 (285)
482 3tum_A Shikimate dehydrogenase 47.9 9.9 0.00034 36.4 2.9 31 81-111 126-158 (269)
483 4a5o_A Bifunctional protein fo 47.9 13 0.00046 35.6 3.8 32 80-111 161-194 (286)
484 1i36_A Conserved hypothetical 47.8 8.8 0.0003 36.4 2.6 28 83-110 3-31 (264)
485 2cvz_A Dehydrogenase, 3-hydrox 47.7 14 0.00049 35.3 4.2 30 83-112 4-33 (289)
486 2wtb_A MFP2, fatty acid multif 47.4 9.1 0.00031 42.4 2.9 31 82-112 314-345 (725)
487 1mld_A Malate dehydrogenase; o 47.3 15 0.00051 36.0 4.2 30 83-112 3-36 (314)
488 1y6j_A L-lactate dehydrogenase 47.3 9.7 0.00033 37.5 2.8 32 81-112 8-42 (318)
489 4eez_A Alcohol dehydrogenase 1 47.1 10 0.00035 37.6 3.1 31 82-112 166-198 (348)
490 2ptg_A Enoyl-acyl carrier redu 47.0 13 0.00043 36.4 3.7 28 83-110 12-43 (319)
491 2o3j_A UDP-glucose 6-dehydroge 47.0 13 0.00044 39.0 3.9 31 82-112 11-44 (481)
492 1cyd_A Carbonyl reductase; sho 47.0 11 0.00036 35.1 3.0 29 83-111 10-40 (244)
493 1lnq_A MTHK channels, potassiu 47.0 7 0.00024 38.7 1.8 30 82-112 117-147 (336)
494 4e21_A 6-phosphogluconate dehy 46.8 10 0.00035 38.0 3.0 33 80-112 22-55 (358)
495 3ldh_A Lactate dehydrogenase; 46.6 10 0.00035 37.5 2.9 31 81-111 22-55 (330)
496 3k7m_X 6-hydroxy-L-nicotine ox 46.6 25 0.00085 35.8 6.0 44 255-313 214-257 (431)
497 2bka_A CC3, TAT-interacting pr 46.5 12 0.00042 34.6 3.3 30 83-112 21-54 (242)
498 2dbq_A Glyoxylate reductase; D 46.5 11 0.00038 37.3 3.2 31 82-112 152-183 (334)
499 3d1l_A Putative NADP oxidoredu 46.4 10 0.00034 36.0 2.7 31 82-112 12-44 (266)
500 3p2o_A Bifunctional protein fo 46.3 15 0.00051 35.3 3.9 32 80-111 160-193 (285)
No 1
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=8.2e-81 Score=680.77 Aligned_cols=489 Identities=41% Similarity=0.760 Sum_probs=374.7
Q ss_pred CCcccEEEECCCCchHHHHHhhhccCeeeEeecCCCCCCCCcchhHHHHHHHhcCCC-CCCccccccCCCceeeccccee
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFSDVNVSFLQNFHMTLADTS-PQSASQYFISTDGVLNARARVL 156 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Laeg~~VlvLEkG~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~l 156 (612)
..+|||||||||+||+++|.||+||.||||||+|+....++.+..+..+...+.... +.+.+|....++.+.+++|++|
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLseg~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~t~~q~~~~~~~~~~~rg~~l 103 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSEKYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERFVSEDGIDNVRGRVL 103 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTTTSCEEEECSSBCGGGSGGGGBGGGHHHHHHSCCCSSSSEEEEECTTSCEEEEECBT
T ss_pred cCcccEEEECccHHHHHHHHHHhcCCcEEEEecCCCcCCCcceecchhHhhhccCCCcCcCCCccccCCCcceeecceec
Confidence 567999999999999999999999999999999986544455555545544333222 3455566666778889999999
Q ss_pred cccccccceeeecCChhhhcCCC--CChhhhcccchhhhhccccCCCCchhHHHHHHHHHHcCCCCCCCCcccCCCceec
Q 007210 157 GGGSSINAGFYTRASSQFIERMG--WDAKLVNESFPWVERQIVHQPKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKI 234 (612)
Q Consensus 157 GG~s~~~~~~~~r~~~~~~~~~g--w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~ 234 (612)
||+|.+|+|+|.|+.+.+++..| |+|+++.+||+++|+.+.+.+...++...+.+++.++|+.+.++...+...++..
T Consensus 104 GGsS~in~~~~~R~~~~d~~~~G~~W~~~~~~p~~~~~e~~~~~~~~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~g~~~ 183 (536)
T 1ju2_A 104 GGTSIINAGVYARANTSIYSASGVDWDMDLVNQTYEWVEDTIVYKPNSQSWQSVTKTAFLEAGVHPNHGFSLDHEEGTRI 183 (536)
T ss_dssp TGGGGTSCCEECBCCTTSSTTSSSCCCHHHHHHHHHHHHHHHCBCCCCCHHHHHHHHHHHHTTCCCEEEECCBCCSEEEE
T ss_pred cccccccCeEEEeCCHHHHhhccCCCChHHHHHHHHhhhcccCCCCCCCcHHHHHHHHHHHcCCCCCCCcccCCCCCcee
Confidence 99999999999999999888777 9999999999999998877777778888899999999987655433344445544
Q ss_pred ceeEECCCCceecHHHhhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCc
Q 007210 235 GGTIFDRFGRRHTAAELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAI 314 (612)
Q Consensus 235 ~~~~~~~~g~r~~~~~~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~ 314 (612)
+.+.++.+|.|+++..|++.+++.|++|++++.|++|++++++ +.+++||++.+.+|+.++++++ ++|+||||||+|
T Consensus 184 g~~~~~~~g~r~s~~~~~~~~~~~~~~v~~~~~v~~i~~~~~~-~~~~~GV~~~~~~g~~~~~~v~--a~k~VILaaGa~ 260 (536)
T 1ju2_A 184 TGSTFDNKGTRHAADELLNKGNSNNLRVGVHASVEKIIFSNAP-GLTATGVIYRDSNGTPHQAFVR--SKGEVIVSAGTI 260 (536)
T ss_dssp CEESBCTTSBBCCGGGGGGGSCTTTEEEEESCEEEEEEECCSS-SCBEEEEEEECTTSCEEEEEEE--EEEEEEECCHHH
T ss_pred eeEEECCCCeEecHHHhhhhhcCCCcEEEeCCEEEEEEECCCC-CCEEEEEEEEeCCCceEEEEec--cCCEEEEcCccc
Confidence 4444457888887777777778899999999999999998631 1389999998767776655422 469999999999
Q ss_pred CChHHHHHcCCCChhhhhhCCceeeecCcccccccccCCCceEEeecCCCccchhhhhhccchhhhHHHhccCCCCCCCc
Q 007210 315 GTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDS 394 (612)
Q Consensus 315 ~sp~lLl~SGIG~~~~L~~~GI~~~~~~p~VG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 394 (612)
+||+||++|||||+++|+++||++++|+|+||+|||||+...+.+..+.+............ ..|.....|+
T Consensus 261 ~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~------ 332 (536)
T 1ju2_A 261 GTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRNFINILPPNPIEPTIVTVLGIS--NDFYQCSFSS------ 332 (536)
T ss_dssp HHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEEEEEECCSSCCCCCCCCEEEEC--SSEEEEEEEE------
T ss_pred CCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcceeEEEEeCCCcccccchhhhHH--HHHHHcCCCC------
Confidence 99999999999999999999999999999999999999987777666544321110000000 0111111111
Q ss_pred ccccccchhccccccccCCCCCCChHHHHHHhhhccCCCCCcccceeEEEeecCCCcceEEEe-cCCCCCCCCeeecCCC
Q 007210 395 IHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSL-INTNVDDNPSVSFNYF 473 (612)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l-~s~d~~~~p~i~~~y~ 473 (612)
+......+..++... ..++.. ...++...+++|.|||+|+| .++||.+.|.|+++|+
T Consensus 333 -------~~~~~~~~~~~~~~~-------------~~~~~~--~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~ 390 (536)
T 1ju2_A 333 -------LPFTTPPFGFFPSSS-------------YPLPNS--TFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYY 390 (536)
T ss_dssp -------CCCSSCCBTTBSSSC-------------CCCCSS--CEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTT
T ss_pred -------CCCChhhheeecCcc-------------cCCCCc--ceEEEeeecCCCCcceEEEeCCCCCcccCceeccccc
Confidence 100000000011000 011111 12345567789999999999 8999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHcCccccccccccchhHHHHHhhhhccccc-----CCCCCCCCHHHHHHHHHhcccccccc
Q 007210 474 SHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVN-----LVPKHTNDTKSLEQFCKDTVITIWHY 548 (612)
Q Consensus 474 ~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-----~~p~~~~~~~~~~~~~~~~~~~~~H~ 548 (612)
.++.|++.++++++.+++++++.+++.+.. ... ...|.. ..|....++++|++|++....+.+|+
T Consensus 391 ~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~-~~~---------~~~p~~~~~~~~~p~~~~~d~~~~~~ir~~~~t~~H~ 460 (536)
T 1ju2_A 391 SNLTDLSHCVSGMKKIGELLSTDALKPYKV-EDL---------PGVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHY 460 (536)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTSGGGGGGCS-SCC---------STTCSCCBSSSCCCSCTTCHHHHHHHHHHHCEECSCC
T ss_pred CCccHHHHHHHHHHHHHHHHcCccchhhhc-ccc---------ccCCCccccccCCCcccCCHHHHHHHHHhccCccccC
Confidence 999999999999999999999988887652 000 000110 02333568999999999999999999
Q ss_pred ccccccCCccCCCCeEeCcCCCeEeecccCCCCCCCChHHHHHHHHHHHHHHHHHHHhhcc
Q 007210 549 HGGCHVGKVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRLGKA 609 (612)
Q Consensus 549 ~Gt~rMG~VVD~~~rV~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~~~~~~ 609 (612)
+||||||+|||++|||||++||||||+||||+++++||++|+||||||+|++|++++|+++
T Consensus 461 ~GTcrMG~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAer~A~~ii~~~~~~~ 521 (536)
T 1ju2_A 461 HGGCLVGKVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGRYVGIKILQERSASD 521 (536)
T ss_dssp EESSCBTTTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCccCCccEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999999999999999999999999999999998764
No 2
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=2.3e-81 Score=683.88 Aligned_cols=498 Identities=21% Similarity=0.322 Sum_probs=361.2
Q ss_pred cccEEEECCCCchHHHHHhhhc--cCeeeEeecCCCCCCCCcchhHHHHHHHh----cCCCCCCccccccCCCceeeccc
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSDVNVSFLQNFHMTL----ADTSPQSASQYFISTDGVLNARA 153 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g 153 (612)
+|||||||+|.|||++|.||+| +.+|||||+|+....++....+..+...+ .+|.+.+.+|....++.+.+++|
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~~~~r~~~~~rG 81 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAGYNGRSIAYPRG 81 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGGGTTCCCBCCCB
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCCCCCceEeccCC
Confidence 5999999999999999999999 78999999998764445444444333322 24567777888888999999999
Q ss_pred ceecccccccceeeecCChhhh-------cCCCCChhhhcccchhhhhcccc--------------C-----------CC
Q 007210 154 RVLGGGSSINAGFYTRASSQFI-------ERMGWDAKLVNESFPWVERQIVH--------------Q-----------PK 201 (612)
Q Consensus 154 ~~lGG~s~~~~~~~~r~~~~~~-------~~~gw~~~~~~~~~~~~~~~~~~--------------~-----------~~ 201 (612)
++|||+|.+|+|+|.|+.+.++ .+.+|.|+++.|||++.|+.... + +.
T Consensus 82 k~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~~~~~ 161 (566)
T 3fim_B 82 RMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSISLPGF 161 (566)
T ss_dssp CBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEBSCSS
T ss_pred cEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeeecCCC
Confidence 9999999999999999998543 35789999999999999876421 0 11
Q ss_pred CchhHHHHHHHHHHc--CCCCCCCCcccCCCceecceeEECCCCceecHHH-hhhh-cCCCCcEEEeccEEEEEEec---
Q 007210 202 QEGWQKALRDSLLDV--GVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAE-LLAS-ANPQKITVLIRATVQKIVFD--- 274 (612)
Q Consensus 202 ~~~~~~~~~~~~~~~--g~~~~~~~~~~~~~g~~~~~~~~~~~g~r~~~~~-~l~~-a~~~g~~v~~~~~V~~l~~~--- 274 (612)
..+....+.+++.++ |++...++......|+......+ .+|.|+++.. |+.. ..++|++|++++.|+||+++
T Consensus 162 ~~~~~~~~~~a~~~~~~G~~~~~d~n~~~~~G~~~~~~~~-~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~~~~~ 240 (566)
T 3fim_B 162 PTPLDDRVLATTQEQSEEFFFNPDMGTGHPLGISWSIASV-GNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVNSGTT 240 (566)
T ss_dssp CCTHHHHHHHHHHHTHHHHCBCSCGGGSCCCEEEECCBSE-ETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEECCEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCccCCCCCCCcceEEeeeeec-CCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEeecCC
Confidence 345667888888888 87533222211222222211112 3788888765 6654 46789999999999999998
Q ss_pred CCCCCCeEEEEEEEeCCC-CeEEEEeecCCCceEEecCCCcCChHHHHHcCCCChhhhhhCCceeeecCcccccccccCC
Q 007210 275 TSGKRPKAVGVIFKDENG-NQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNP 353 (612)
Q Consensus 275 ~~g~~~~v~GV~~~~~~g-~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG~~~~L~~~GI~~~~~~p~VG~nl~dh~ 353 (612)
++ ..||+||++.+.+| +.++++ |+|+||||||+|+||+|||+|||||+++|+++||++++|+|+||+|||||+
T Consensus 241 ~g--~~rA~GVe~~~~~g~~~~~v~----A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~ 314 (566)
T 3fim_B 241 NG--LPAFRCVEYAEQEGAPTTTVC----AKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHL 314 (566)
T ss_dssp TT--EEECCEEEEESSTTSCCEEEE----EEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCE
T ss_pred CC--CCEEEEEEEEECCCceEEEEE----eeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCc
Confidence 22 12999999996556 777776 569999999999999999999999999999999999999999999999999
Q ss_pred CceEEeecCCCccch-h-hh-hhccchhhhHHHhccCCCCCCCcccccccchhcc-----ccccccCCCCCCChHHHHHH
Q 007210 354 MNAVFVPSNRPVEQS-L-IE-TVGITKLGVYIEASSGFGESRDSIHCHHGIMSAE-----IGQLSTIPPKQRTPEAIQDY 425 (612)
Q Consensus 354 ~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 425 (612)
.+.+.+..+.+.... . .. .........|.....|+...... ...+++... ...+.........+++ +.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~~~~--~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~-~~~ 391 (566)
T 3fim_B 315 LLPAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTALIA--NHLAWLRLPSNSSIFQTFPDPAAGPNSAHW-ETI 391 (566)
T ss_dssp EECCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGCCSC--SEEEEECCCTTCGGGGTSCCCSSSTTSCSE-EEE
T ss_pred cceEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCcccChh--hheeeeccccchhhhhhhccccccCCCCCE-EEE
Confidence 877766665443211 0 00 00011223455555553211100 000111000 0000000000011110 000
Q ss_pred hhhc--c-CCCCC-cccceeEEEeecCCCcceEEEecCCCCCCCCeeecCCCCCHHHHHHHHHHHHHHHHHHcCcccccc
Q 007210 426 IRNK--R-TLPHE-AFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNY 501 (612)
Q Consensus 426 ~~~~--~-~~~~~-~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~p~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 501 (612)
+... . ..... ......+...+++|+|||+|+|+|+||++.|.|+++|+.++.|++.++++++.+++++++.+++.+
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~ 471 (566)
T 3fim_B 392 FSNQWFHPAIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQAVKSNLRFLSGQAWADF 471 (566)
T ss_dssp EESSCCCTTSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTSGGGTTT
T ss_pred ecccchhhcccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHHHHHHHHHHhCcccCCc
Confidence 0000 0 00000 001123456788999999999999999999999999999999999999999999999999888876
Q ss_pred ccccchhHHHHHhhhhcccccCCC--CCCCCHHHHHHHHHhccccccccccccccC------CccCCCCeEeCcCCCeEe
Q 007210 502 TQCDQKSVEAILNASVRANVNLVP--KHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRLRVV 573 (612)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~p~~~~p--~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG------~VVD~~~rV~g~~nL~V~ 573 (612)
.. .+..| ....+|++|++|+|+...+.+|++|||||| +|||++|||||++|||||
T Consensus 472 ~~-----------------~~~~P~~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~LrVv 534 (566)
T 3fim_B 472 VI-----------------RPFDPRLRDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDGLRIV 534 (566)
T ss_dssp EE-----------------EESSGGGSCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBSEEEC
T ss_pred cc-----------------cccCCCcccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCCcEEc
Confidence 52 01122 245789999999999999999999999998 799999999999999999
Q ss_pred ecccCCCCCCCChHHHHHHHHHHHHHHHHHH
Q 007210 574 DGSTYDESPGTNPQGTVLMMGRYMGVKILRQ 604 (612)
Q Consensus 574 DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~ 604 (612)
|+||||+++++||++|+||||||+||.|+++
T Consensus 535 DaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 535 DGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp SGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred ccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999988765
No 3
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=3.7e-80 Score=674.92 Aligned_cols=490 Identities=23% Similarity=0.295 Sum_probs=349.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhc--cCeeeEeecCCC-CCCCCcchhHHHHHHHh---cCCCCCCccccccCCCceeec
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGV-PFSDVNVSFLQNFHMTL---ADTSPQSASQYFISTDGVLNA 151 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 151 (612)
+.+|||||||+|.|||++|.||+| +.+|||||+|+. ...++.+..+..+...+ .+|.|.+.+|. ..++.+.++
T Consensus 17 ~~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-~~~r~~~~~ 95 (583)
T 3qvp_A 17 GRTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-TNNQTALIR 95 (583)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-TTSCCCEEC
T ss_pred CCCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-CCCCeeecc
Confidence 468999999999999999999998 689999999984 33345555554443332 23445555553 467788999
Q ss_pred ccceecccccccceeeecCChhhhc------CC-CCChhhhcccchhhhhccc---------------cC----------
Q 007210 152 RARVLGGGSSINAGFYTRASSQFIE------RM-GWDAKLVNESFPWVERQIV---------------HQ---------- 199 (612)
Q Consensus 152 ~g~~lGG~s~~~~~~~~r~~~~~~~------~~-gw~~~~~~~~~~~~~~~~~---------------~~---------- 199 (612)
||++|||+|.+|+|+|.|+++.+++ .. +|.|+++.|||++.|+... ++
T Consensus 96 rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl~v~~ 175 (583)
T 3qvp_A 96 SGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTVHAGP 175 (583)
T ss_dssp CBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSEEEBC
T ss_pred CceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCEEecC
Confidence 9999999999999999999986553 34 8999999999999987631 00
Q ss_pred C----CCchhHHHHHHHHHHcCCCCCCCCcccCCCceecceeEECCCCceecHHH-hhh-hcCCCCcEEEeccEEEEEEe
Q 007210 200 P----KQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAE-LLA-SANPQKITVLIRATVQKIVF 273 (612)
Q Consensus 200 ~----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~g~r~~~~~-~l~-~a~~~g~~v~~~~~V~~l~~ 273 (612)
+ ...++...+.++++++|++...++......|..........+|.|+++.. |+. ..++.|++|++++.|+||++
T Consensus 176 ~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V~rIl~ 255 (583)
T 3qvp_A 176 RDTGDDYSPIVKALMSAVEDRGVPTKKDFGCGDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYVGKVLL 255 (583)
T ss_dssp CCCSSCBCTHHHHHHHHHHTTTCCBCCCTTSSCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEEEEEEE
T ss_pred CCCcccCCHHHHHHHHHHHHcCCCcCCCCCCCCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEEEEEEe
Confidence 1 12456778889999999864322222222232222222234678887765 664 45678999999999999999
Q ss_pred cCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCCChhhhhhCCceeeecCcccccccccCC
Q 007210 274 DTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNP 353 (612)
Q Consensus 274 ~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG~~~~L~~~GI~~~~~~p~VG~nl~dh~ 353 (612)
++.+.+.||+||++.+.+|+.++++ |+|+||||||+|+||+|||+|||||+++|+++||++++|+| ||+|||||+
T Consensus 256 d~~~~~~ra~GV~~~~~~G~~~~v~----A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLP-VG~NLqDH~ 330 (583)
T 3qvp_A 256 SQNGTTPRAVGVEFGTHKGNTHNVY----AKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLP-VGLNLQDQT 330 (583)
T ss_dssp ECSSSSCEEEEEEEESSTTCEEEEE----EEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCC-TTCCBBCCE
T ss_pred ccCCCCCEEEEEEEEecCCcEEEEE----ECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCc-cccchhhCc
Confidence 8421123999999986678888777 56899999999999999999999999999999999999999 999999999
Q ss_pred CceEEeecCCCcc--------chhhhhhccc--hhhhHHHhccCCCCCCCcccccccchhc---cccccccCCCCCCChH
Q 007210 354 MNAVFVPSNRPVE--------QSLIETVGIT--KLGVYIEASSGFGESRDSIHCHHGIMSA---EIGQLSTIPPKQRTPE 420 (612)
Q Consensus 354 ~~~~~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 420 (612)
.+.+.+..+.+.. ..+....+.. ....|..... +.+.. +.+.+. ....
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~------~~~~ 391 (583)
T 3qvp_A 331 TATVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNTKL-------------EQWAEEAVARGGFH------NTTA 391 (583)
T ss_dssp EEEEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHHCH-------------HHHHHHHHHTTSCS------CHHH
T ss_pred cceEEEEecCCccccccccccccHHHhhccchHHHHHHHHhhc-------------chhhcccccccCcc------ccHH
Confidence 8877776553210 0000000000 0000111000 00000 000000 0000
Q ss_pred HHHHHhh-----hccCCCCCc----cc-ceeEEEeecCCCcceEEEecCCCCCCCCee-ecCCCCCHHHHHHHHHHHHHH
Q 007210 421 AIQDYIR-----NKRTLPHEA----FK-GGFILEKIASPISTGELSLINTNVDDNPSV-SFNYFSHPLDLKRCVDGVRMA 489 (612)
Q Consensus 421 ~~~~~~~-----~~~~~~~~~----~~-~~~~~~~~~~p~s~g~v~l~s~d~~~~p~i-~~~y~~~~~D~~~~~~~~~~~ 489 (612)
....+.. .....+... .. ...+....++|.|||+|+|+|+||++.|.| +++|+.++.|++.++++++.+
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~ 471 (583)
T 3qvp_A 392 LLIQYENYRDWIVNHNVAYSELFLDTAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLA 471 (583)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEEEEECTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHH
T ss_pred HHhhhccchhhhccCCCCcceeeeccCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHH
Confidence 0000000 000000000 00 111223347899999999999999999999 999999999999999999999
Q ss_pred HHHHcCccccccccccchhHHHHHhhhhcccccCCCCCCCCHHHHHHHHHhccccccccccccccC-----CccCCCCeE
Q 007210 490 AKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG-----KVVSTEYKV 564 (612)
Q Consensus 490 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG-----~VVD~~~rV 564 (612)
++++++.+++.+.. . ...|+... ....+|++|++|+|....+.+|++|||||| +|||++|||
T Consensus 472 ~~i~~~~~~~~~~~-~-----------~~~pg~~~-~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~~~VVD~~lrV 538 (583)
T 3qvp_A 472 RNISNSGAMQTYFA-G-----------ETIPGDNL-AYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEMGGVVDNAARV 538 (583)
T ss_dssp HHHHTSTTHHHHEE-E-----------EEESGGGS-CTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGGTCSBCTTCBB
T ss_pred HHHHhCcchhhccc-c-----------ccCCCccc-ccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCCCceECCCCeE
Confidence 99999888776542 0 00122111 123689999999999999999999999999 799999999
Q ss_pred eCcCCCeEeecccCCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 007210 565 LGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQR 605 (612)
Q Consensus 565 ~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~~ 605 (612)
||++||||||+||||+++++||++|+||||||+||.|+++.
T Consensus 539 ~Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~ 579 (583)
T 3qvp_A 539 YGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDY 579 (583)
T ss_dssp TTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999877654
No 4
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=1.6e-77 Score=655.05 Aligned_cols=493 Identities=22% Similarity=0.302 Sum_probs=344.8
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-c-CeeeEeecCCCC-CCCCcchhHHHHHHHhc---CCCCCCccccccCCCcee--
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-N-FTVLLLERGGVP-FSDVNVSFLQNFHMTLA---DTSPQSASQYFISTDGVL-- 149 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-- 149 (612)
..+|||||||+|.|||++|.||+| + .||||||||+.. ...+.+..+..+...+. +|.+.+. ..++...
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~----~~~r~~~~~ 79 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT----MVRRDDYER 79 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE----EEEETTEEE
T ss_pred CCcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE----ECCcccccc
Confidence 467999999999999999999999 6 799999999863 22333333333322211 1222211 2233334
Q ss_pred ----ecccceecccccccceeeecCChhhhc------CCCCChhhhcccchhhhhccccC--------------------
Q 007210 150 ----NARARVLGGGSSINAGFYTRASSQFIE------RMGWDAKLVNESFPWVERQIVHQ-------------------- 199 (612)
Q Consensus 150 ----~~~g~~lGG~s~~~~~~~~r~~~~~~~------~~gw~~~~~~~~~~~~~~~~~~~-------------------- 199 (612)
++|||+|||+|.+|+|+|.|+.+.+++ +.+|.|+++.+||++.|+.....
T Consensus 80 ~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~v~~ 159 (577)
T 3q9t_A 80 IEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIPISH 159 (577)
T ss_dssp EEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEEEEE
T ss_pred ccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEEeeC
Confidence 899999999999999999999986553 46899999999999988654311
Q ss_pred CC----CchhHHHHHHHHHHcCCCCCCCCcccCCCceecceeEECCCCceecHHHhhhhcCCCCcEEEeccEEEEEEecC
Q 007210 200 PK----QEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAELLASANPQKITVLIRATVQKIVFDT 275 (612)
Q Consensus 200 ~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~g~r~~~~~~l~~a~~~g~~v~~~~~V~~l~~~~ 275 (612)
+. ..++...+.+++.++|++...++......|..... ....+|.|+++..|+ ..+.|++|++++.|+||++++
T Consensus 160 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~-~~~~~g~R~s~~~~l--~~r~Nl~v~~~a~v~ri~~~~ 236 (577)
T 3q9t_A 160 AELIDEMAPFRENLTKAWKSMGQPLIENIYDGEMDGLTHCC-DTIYRGQRSGSFLFV--KNKPNITIVPEVHSKRLIINE 236 (577)
T ss_dssp CCCCGGGHHHHHHHHHHHHHTTCCBCSCCSSSCCCEEEECE-ESEETTEECCGGGGS--SSCTTEEEECSEEEEEEEEET
T ss_pred CCCCcccchHHHHHHHHHHHcCCCcCCCCCCCCcCeEEeec-ceecCCeEeeHHHHH--hcCCCeEEEcCcEEEEEEEeC
Confidence 00 12356677788899998643222111122221111 112467787765442 467899999999999999984
Q ss_pred CCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCCChhhhhhCCceeeecCcccccccccCCCc
Q 007210 276 SGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMN 355 (612)
Q Consensus 276 ~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG~~~~L~~~GI~~~~~~p~VG~nl~dh~~~ 355 (612)
.+ .+|+||++.+.+|+.++++ ++|+||||||+|+||+|||+|||||+++|+++||++++|+|+||+|||||+.+
T Consensus 237 ~~--~~a~GV~~~~~~g~~~~v~----A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~~ 310 (577)
T 3q9t_A 237 AD--RTCKGVTVVTAAGNELNFF----ADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGV 310 (577)
T ss_dssp TT--TEEEEEEEEETTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCEEE
T ss_pred CC--CEEEEEEEEeCCCcEEEEE----eeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCcce
Confidence 21 2999999997668877776 56999999999999999999999999999999999999999999999999988
Q ss_pred eEEeecCCCccchhh--h--hhccchhhhHHHhccCCCCCCCcccccccchhccc---------------ccccc-CCCC
Q 007210 356 AVFVPSNRPVEQSLI--E--TVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEI---------------GQLST-IPPK 415 (612)
Q Consensus 356 ~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---------------~~~~~-~~~~ 415 (612)
.+.+..+.+...... . .........|.....|+..... ....++..... ..... .+..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (577)
T 3q9t_A 311 PFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGSGL--LELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLG 388 (577)
T ss_dssp EEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGCCS--EEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCTTS
T ss_pred eEEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCcccch--hheeEEeecChhhhcchhhhhhhhccccccccCCCC
Confidence 877776654321100 0 0011123345555444221100 00000000000 00000 0000
Q ss_pred CCChHHHHHHh----hhcc-CCCCC-cccceeEEEeecCCCcce-EEEecCCCCCCCCeeecCCCCCHHHHHHHHHHHHH
Q 007210 416 QRTPEAIQDYI----RNKR-TLPHE-AFKGGFILEKIASPISTG-ELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRM 488 (612)
Q Consensus 416 ~~~~~~~~~~~----~~~~-~~~~~-~~~~~~~~~~~~~p~s~g-~v~l~s~d~~~~p~i~~~y~~~~~D~~~~~~~~~~ 488 (612)
.+.+...+. .... ..... ......+...+++|+||| +|+|+|+||++.|.|+++|+.++.|++.++++++.
T Consensus 389 --~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~~~D~~~~~~~~~~ 466 (577)
T 3q9t_A 389 --QPHFELDFVCMFGTAFQWHFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFANDLDIIAMREGIRF 466 (577)
T ss_dssp --CCSEEEEEESSCCGGGCSSSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCSHHHHHHHHHHHHH
T ss_pred --CceEEEEecccccccccccccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCCccHHHHHHHHHHH
Confidence 000000000 0000 00000 001123456788999999 99999999999999999999999999999999999
Q ss_pred HHHHH-cCccccccccccchhHHHHHhhhhcccccCCC-CCCCCHHHHHHHHHhccccccccccccccC-----CccCCC
Q 007210 489 AAKIV-QSKHFLNYTQCDQKSVEAILNASVRANVNLVP-KHTNDTKSLEQFCKDTVITIWHYHGGCHVG-----KVVSTE 561 (612)
Q Consensus 489 ~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p-~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG-----~VVD~~ 561 (612)
+++++ ++.+++.+.. .+..| ....+|++|++|+|+...+.+|++|||||| +|||++
T Consensus 467 ~~~i~~~~~~~~~~~~-----------------~e~~p~~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~VVD~~ 529 (577)
T 3q9t_A 467 SYDLLFKGEGFKDLVE-----------------SEYPWEMPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNIDQGVVDPK 529 (577)
T ss_dssp HHHHHHHSTTGGGTEE-----------------EEESSCCCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTTTCSBCTT
T ss_pred HHHHHHhChhhhhccc-----------------cccCCCCCcCCHHHHHHHHHhccccccccccceecCCCCCCceECCC
Confidence 99999 8888887652 01112 246789999999999999999999999999 699999
Q ss_pred CeEeCcCCCeEeecccCCCCCCCChHHHHHHHHHHHHHHHHHH
Q 007210 562 YKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQ 604 (612)
Q Consensus 562 ~rV~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~ 604 (612)
|||||++||||||+||||+++++||++|+||||||+||.|+++
T Consensus 530 lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~ 572 (577)
T 3q9t_A 530 LKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAE 572 (577)
T ss_dssp CBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred CeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999977765
No 5
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=1.8e-74 Score=636.20 Aligned_cols=503 Identities=20% Similarity=0.241 Sum_probs=350.4
Q ss_pred CCcccEEEECCCCchHHHHHhhhc--cCeeeEeecCCCCCCCCcch-hHHHHHHHhc---CCCCCCccccccCCCceeec
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSDVNVS-FLQNFHMTLA---DTSPQSASQYFISTDGVLNA 151 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 151 (612)
..+|||||||+|.+|+++|.+|++ |.+|+|||+|+....++.+. .+..+...+. +|.+.+.+ ...++.+.++
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p--~~~~~~~~~~ 99 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP--LINNRTNNIK 99 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC--CTTSCCCEEC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc--CCCCceeeee
Confidence 357999999999999999999999 79999999998664444333 3322222211 12222222 3456778899
Q ss_pred ccceecccccccceeeecCChhhhc-------CCCCChhhhcccchhhhhcccc-----------C--------------
Q 007210 152 RARVLGGGSSINAGFYTRASSQFIE-------RMGWDAKLVNESFPWVERQIVH-----------Q-------------- 199 (612)
Q Consensus 152 ~g~~lGG~s~~~~~~~~r~~~~~~~-------~~gw~~~~~~~~~~~~~~~~~~-----------~-------------- 199 (612)
+|++|||+|.+|+|+|.|+.+.+++ ..+|.|++++|||+++|+.... .
T Consensus 100 rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v~~ 179 (587)
T 1gpe_A 100 AGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQSGA 179 (587)
T ss_dssp CBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEEBC
T ss_pred ccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEEcc
Confidence 9999999999999999999985543 4689999999999999987642 0
Q ss_pred ----CCCchhHHHHHHHHHHcCCCCCCCCcccCCCceecceeEECCCCceecHHH-hhh-hcCCCCcEEEeccEEEEEEe
Q 007210 200 ----PKQEGWQKALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAE-LLA-SANPQKITVLIRATVQKIVF 273 (612)
Q Consensus 200 ----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~g~r~~~~~-~l~-~a~~~g~~v~~~~~V~~l~~ 273 (612)
....+..+.+.++++++|++....+......|+..+....+.+|.|+++.. |+. .+++.|++|++++.|++|++
T Consensus 180 ~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~l~~ 259 (587)
T 1gpe_A 180 RDNGQPWSPIMKALMNTVSALGVPVQQDFLCGHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGKVLF 259 (587)
T ss_dssp CCCSSCBCTHHHHHHHHHHHTTCCBSCCTTSSCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEEEEE
T ss_pred CCCcCCCCHHHHHHHHHHHHcCCCcCCCCCCCCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEEEEE
Confidence 022456788889999999875433222222333322222234678887754 774 45678999999999999999
Q ss_pred cCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCCChhhhhhCCceeeecCcccccccccCC
Q 007210 274 DTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNP 353 (612)
Q Consensus 274 ~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG~~~~L~~~GI~~~~~~p~VG~nl~dh~ 353 (612)
++++++.+|+||++.+.+|+.++++ ++|+||||||+|+||+|||+|||||+++|+++||++++|+| ||+|||||+
T Consensus 260 ~~~~~~~~~~GV~~~~~~g~~~~v~----A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlP-VG~nL~DH~ 334 (587)
T 1gpe_A 260 KQTASGPQAVGVNFGTNKAVNFDVF----AKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLP-VGINMQDQT 334 (587)
T ss_dssp EEETTEEEEEEEEEEEETTEEEEEE----EEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECC-TTCSBBCCE
T ss_pred CCCCCCCEEEEEEEEeCCCcEEEEE----ecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCC-CCcchhcCc
Confidence 8532113999999986678777776 45999999999999999999999999999999999999999 999999999
Q ss_pred CceEEeecCCCccchhhhhhc-cchhhhHHHhccCCCCCCCcccccccchhccccccccCCCCCC--ChHHHHHHhhhc-
Q 007210 354 MNAVFVPSNRPVEQSLIETVG-ITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQR--TPEAIQDYIRNK- 429 (612)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~- 429 (612)
...+.+.++++... ...... ......|.....|+.... ......+......... ..... .++ ++..+..+
T Consensus 335 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~G~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~ 408 (587)
T 1gpe_A 335 TTTVSSRASSAGAG-QGQAVFFANFTETFGDYAPQARDLL---NTKLDQWAEETVARGG-FHNVTALKVQ-YENYRNWLL 408 (587)
T ss_dssp EEEEEEEECGGGCS-BCEEEEEEEHHHHHGGGHHHHHHHH---HHSHHHHHHHHHHTTS-CSCHHHHHHH-HHHHHHHHH
T ss_pred ccceEEEeCCCccc-ccchHHHHHHHHHHHhCCCCCcccc---ccceeeEeeccccccc-cccccccccc-HHHHhhhcc
Confidence 88877766543211 000000 001111221111100000 0000000000000000 00000 011 11111110
Q ss_pred -cCCCCC-----cccceeEEEeecCCCcceEEEecCCCCCCCC-eeecCCCCCHHHHHHHHHHHHHHHHHHcCccccccc
Q 007210 430 -RTLPHE-----AFKGGFILEKIASPISTGELSLINTNVDDNP-SVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYT 502 (612)
Q Consensus 430 -~~~~~~-----~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~p-~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ 502 (612)
...+.. ......+...+++|.|||+|+|+++||++.| .|+++|+.++.|++.++++++.+++++++.+++.+.
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ 488 (587)
T 1gpe_A 409 DEDVAFAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYF 488 (587)
T ss_dssp HSCCEEEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHHE
T ss_pred CCCCcceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhhhc
Confidence 001000 0011234456788999999999999999999 999999999999999999999999999998877665
Q ss_pred cccchhHHHHHhhhhcccccCCCCCCCCHHHHHHHHHhccccccccccccccC-----CccCCCCeEeCcCCCeEeeccc
Q 007210 503 QCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG-----KVVSTEYKVLGIDRLRVVDGST 577 (612)
Q Consensus 503 ~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG-----~VVD~~~rV~g~~nL~V~DaSv 577 (612)
.. . ..|+... ....++++|++|++....+.+|++|||||| +|||++|||||++||||||+||
T Consensus 489 ~~-~-----------~~pg~~~-~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~~sVVD~~lrV~Gv~nLrVvDaSv 555 (587)
T 1gpe_A 489 AG-E-----------TLPGYNL-VQNATLSQWSDYVLQNFRPNWHAVSSCSMMSRELGGVVDATAKVYGTQGLRVIDGSI 555 (587)
T ss_dssp EE-E-----------EESGGGS-CTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGGTCSBCTTCBBTTCBSEEECSTTC
T ss_pred cc-c-----------cCCCccc-cCCCCHHHHHHHHHHhcCcccCccCccccCCCCCCceECCCCEEECCCCcEEeeecc
Confidence 20 0 0122111 113689999999999999999999999999 5999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHHh
Q 007210 578 YDESPGTNPQGTVLMMGRYMGVKILRQRL 606 (612)
Q Consensus 578 ~P~~~~~NP~~Ti~ala~r~a~~i~~~~~ 606 (612)
||+++++||++|+||||||+||+|+++..
T Consensus 556 ~P~~~~~Np~~ti~aiAeraAd~I~~~~~ 584 (587)
T 1gpe_A 556 PPTQVSSHVMTIFYGMALKVADAILDDYA 584 (587)
T ss_dssp CSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999998887654
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=3.6e-73 Score=623.71 Aligned_cols=471 Identities=22% Similarity=0.342 Sum_probs=341.3
Q ss_pred CCcccEEEECCCCchHHHHHhhhc--cCeeeEeecCCCCCCCCcchhHHHHHHHh---cCCCCCCccccccCCCceeecc
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSDVNVSFLQNFHMTL---ADTSPQSASQYFISTDGVLNAR 152 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 152 (612)
..+|||||||||+||+++|.||+| +.||||||+|+... ++.+..+..+.... .+|.+.+.+|....++.+.+++
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~~-~~~~~~p~~~~~~~~~~~dw~~~t~p~~~~~~~~~~~~r 93 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEPT-DPDIWNPAAWPALQGRSYDWDYRTEAQAGTAGRAHHWAR 93 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCCC-CGGGGSGGGGGGTTTSTTBCCEECCCBGGGTTBCCEECC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCCC-CcchhChhhHhhccCCccccCccccccCCCCCCeEeccC
Confidence 458999999999999999999998 68999999998643 33344443332221 2344556677788888999999
Q ss_pred cceecccccccceeeecCChhhhc-------CCCCChhhhcccchhhhhccccC----------------CCCchhHHHH
Q 007210 153 ARVLGGGSSINAGFYTRASSQFIE-------RMGWDAKLVNESFPWVERQIVHQ----------------PKQEGWQKAL 209 (612)
Q Consensus 153 g~~lGG~s~~~~~~~~r~~~~~~~-------~~gw~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~ 209 (612)
|++|||+|.+|+|+|.|+.+.+|+ +.+|.|+++.+||++.|+..... ....+..+.+
T Consensus 94 G~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~~~~~~~~~g~~~~~~~~~~~~p~~~~~ 173 (526)
T 3t37_A 94 GRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLGGDGIHGKGGPLPIHLPADEVSPLARAF 173 (526)
T ss_dssp BCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTTTSSSSCSSCSEECBCCSTTSCHHHHHH
T ss_pred ccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCCCccccCcCCCcCcccccccCCHHHHHH
Confidence 999999999999999999986653 46799999999999998764321 1234567788
Q ss_pred HHHHHHcCCCCCCCCcccCCCceecceeEECCCCceecHHH-hh-hh-cCCCCcEEEeccEEEEEEecCCCCCCeEEEEE
Q 007210 210 RDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTAAE-LL-AS-ANPQKITVLIRATVQKIVFDTSGKRPKAVGVI 286 (612)
Q Consensus 210 ~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~g~r~~~~~-~l-~~-a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~ 286 (612)
.++..+.|++...........++... ..++..|.+.+... ++ +. ..+.|++|++++.|++|+++++ +++||+
T Consensus 174 ~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~----~a~gv~ 248 (526)
T 3t37_A 174 IEAGASLGLPRLEGHNSGEMIGVTPN-SLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEGN----QVRSLE 248 (526)
T ss_dssp HHHHHHTTCCBCSSSCSSCCBSBCCC-CBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEETT----EEEEEE
T ss_pred HHHHHHcCCCcccCCCCCcccccccc-cccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecCC----eEEEEE
Confidence 89999999865433222222222111 11224566665543 44 32 3678999999999999999876 999999
Q ss_pred EEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCCChhhhhhCCceeeecCcccccccccCCCceEE-eecCCCc
Q 007210 287 FKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVF-VPSNRPV 365 (612)
Q Consensus 287 ~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG~~~~L~~~GI~~~~~~p~VG~nl~dh~~~~~~-~~~~~~~ 365 (612)
+.+. +....+. +|+||||||+|+||+|||+|||||++.|+++||+++.|+|+||+|||||+..... +....+.
T Consensus 249 ~~~~-~~~~~~~-----a~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~ 322 (526)
T 3t37_A 249 VVGR-QGSAEVF-----ADQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPV 322 (526)
T ss_dssp EEET-TEEEEEE-----EEEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCC
T ss_pred EEec-CceEEEe-----ecceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCCc
Confidence 9864 4444443 5999999999999999999999999999999999999999999999999865433 2223222
Q ss_pred cchhhhhhccchhhhHHHhccCCCCCCCcccccccchhccccccccCCCCCCChHHHHHHhhhccCCCCC-cccceeEEE
Q 007210 366 EQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHE-AFKGGFILE 444 (612)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 444 (612)
...... .... ..+.. ...+.... ...+.+. .+. .+... ..++.. ......+..
T Consensus 323 ~~~~~~--~~~~-~~~~~-~~~~~~~~---~~~~~~~---~~~---~~~~~-------------~~~~~~~~~~~~~~~~ 376 (526)
T 3t37_A 323 PPSRLQ--HSES-MAYMR-ADSFTAAG---QPEIVVG---CGV---APIVS-------------ESFPAPAAGSAYSLLF 376 (526)
T ss_dssp CCCSSC--SEEE-EEEEC-SSCSSCCS---SCCEEEE---EES---SCCCC-------------TTSCCCCTTSEEEEEE
T ss_pred chHhhc--chhh-hhhhh-cccccccC---Ccceeee---ccc---ccccc-------------cccccccCCcceeeec
Confidence 111000 0000 00000 00010000 0000000 000 00000 000000 011123445
Q ss_pred eecCCCcceEEEecCCCCCCCCeeecCCCCCHHHHHHHHHHHHHHHHHHcCccccccccccchhHHHHHhhhhcccccCC
Q 007210 445 KIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLV 524 (612)
Q Consensus 445 ~~~~p~s~g~v~l~s~d~~~~p~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 524 (612)
.+.+|.|||+|++.++||.+.|.|+++|+.++.|++.++++++.+++++++..+..+.. .+..
T Consensus 377 ~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~-----------------~~~~ 439 (526)
T 3t37_A 377 GITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRE-----------------RELL 439 (526)
T ss_dssp EESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEE-----------------EECS
T ss_pred cccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccc-----------------cccC
Confidence 67899999999999999999999999999999999999999999999999887776652 1234
Q ss_pred CCCCCCHHHHHHHHHhccccccccccccccC----CccCCCCeEeCcCCCeEeecccCCCCCCCChHHHHHHHHHHHHHH
Q 007210 525 PKHTNDTKSLEQFCKDTVITIWHYHGGCHVG----KVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVK 600 (612)
Q Consensus 525 p~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG----~VVD~~~rV~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~ 600 (612)
|....+++++++|++....+.+|++|||||| +|||++|||||++||||||+||||+++++||++||||||||+||+
T Consensus 440 pg~~~~~~~~~~~ir~~~~t~~H~~GTcrMG~d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd~ 519 (526)
T 3t37_A 440 PGTPNSAAEMDDFIARSVITHHHPCGTCRMGKDPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFARQ 519 (526)
T ss_dssp SCCCCSHHHHHHHHHHHEEECSCCBCTTCBCSSTTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhcCccCcccCccccCCCCCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHHH
Confidence 5556789999999999999999999999999 699999999999999999999999999999999999999999998
Q ss_pred HHH
Q 007210 601 ILR 603 (612)
Q Consensus 601 i~~ 603 (612)
.-.
T Consensus 520 ~~~ 522 (526)
T 3t37_A 520 YHH 522 (526)
T ss_dssp HHH
T ss_pred hhc
Confidence 653
No 7
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.7e-71 Score=608.55 Aligned_cols=477 Identities=27% Similarity=0.387 Sum_probs=342.5
Q ss_pred CcccEEEECCCCchHHHHHhhhc--cCeeeEeecCCCCCCCCcchhHHHHHHHh---cCCCCCCccccccCCCceeeccc
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFSDVNVSFLQNFHMTL---ADTSPQSASQYFISTDGVLNARA 153 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g 153 (612)
.+|||||||+|.+|+++|.+|++ |.+|+|||+|+..........+..+...+ .++.+.+.++.. .++.+.+++|
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-~~~~~~~~rG 90 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-GNSFMRHARA 90 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-SCTTCEECCB
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-CCceEEeecc
Confidence 57999999999999999999999 68999999998653322222222222222 122333334444 5677889999
Q ss_pred ceecccccccceeeecCChhhhc-------CCCCChhhhcccchhhhhccc------cC-----------CCCchhHHHH
Q 007210 154 RVLGGGSSINAGFYTRASSQFIE-------RMGWDAKLVNESFPWVERQIV------HQ-----------PKQEGWQKAL 209 (612)
Q Consensus 154 ~~lGG~s~~~~~~~~r~~~~~~~-------~~gw~~~~~~~~~~~~~~~~~------~~-----------~~~~~~~~~~ 209 (612)
++|||+|.+|+|+|.|+.+.+++ ..+|.|+++.|||+++|+... ++ +...+..+.+
T Consensus 91 k~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~~~~~~g~~Gpl~v~~~~~~~~~~~~~ 170 (546)
T 2jbv_A 91 KVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGPDAPHHGDSGPVHLMNVPPKDPTGVAL 170 (546)
T ss_dssp CSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBTTBTTSCBSCSEEEEECCSCCHHHHHH
T ss_pred cccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCCccccCCCCCCEEEecCCCCCHHHHHH
Confidence 99999999999999999985432 357999999999999998654 11 1234567788
Q ss_pred HHHHHHcCCCCCCCCcccC--CCceecceeEECC-CCceecHHH-hhhhc-CCCCcEEEeccEEEEEEecCCCCCCeEEE
Q 007210 210 RDSLLDVGVSPFNGFTYDH--IYGTKIGGTIFDR-FGRRHTAAE-LLASA-NPQKITVLIRATVQKIVFDTSGKRPKAVG 284 (612)
Q Consensus 210 ~~~~~~~g~~~~~~~~~~~--~~g~~~~~~~~~~-~g~r~~~~~-~l~~a-~~~g~~v~~~~~V~~l~~~~~g~~~~v~G 284 (612)
.++++++|++.. .+.... ..|+..+... +. +|.|+++.. |+..+ ++.|++|++++.|++|++++++ +++|
T Consensus 171 ~~a~~~~G~~~~-d~n~~~~~~~g~~~~~~~-~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~---~~~G 245 (546)
T 2jbv_A 171 LDACEQAGIPRA-KFNTGTTVVNGANFFQIN-RRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDADR---RCTG 245 (546)
T ss_dssp HHHHHHTTCCBC-CSSSSSCCSSEEEECEEC-BCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTTS---BEEE
T ss_pred HHHHHHCCCCcc-CCCCCCcCcceEEeeeee-cCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCCC---eEEE
Confidence 899999998754 322222 3333322222 24 778877654 77666 4689999999999999998633 9999
Q ss_pred EEEEeCC-CCeEEEEeecCCCceEEecCCCcCChHHHHHcCCCChhhhhhCCceeeecCcccccccccCCCceEEeecCC
Q 007210 285 VIFKDEN-GNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVLDNAHIGKGMADNPMNAVFVPSNR 363 (612)
Q Consensus 285 V~~~~~~-g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG~~~~L~~~GI~~~~~~p~VG~nl~dh~~~~~~~~~~~ 363 (612)
|++.+.. |+.++++ ++|+||||||+|+||+||++|||||+++|+++||+++.|+|+||+|||||+...+.+.++.
T Consensus 246 V~~~~~~~g~~~~i~----A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~~~~~~~~~ 321 (546)
T 2jbv_A 246 VDIVDSAFGHTHRLT----ARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEGVVQFEAKQ 321 (546)
T ss_dssp EEEESSTTSCEEEEE----EEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEECCEEEEESS
T ss_pred EEEEECCCCcEEEEE----eCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccceEEEEecC
Confidence 9998532 7766776 4469999999999999999999999999999999999999999999999998887776654
Q ss_pred CccchhhhhhccchhhhHHHhccCCCCCCCcccccccchhccccccccCCCCCCChHHHHHHhhhccCCCCCcccceeEE
Q 007210 364 PVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDYIRNKRTLPHEAFKGGFIL 443 (612)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (612)
+..... ........|.....+ .. ...+.+... ... ... .... .. .. .. .....+.
T Consensus 322 ~~~~~~---~~~~~~~~f~~~~~~--~~----~p~~~~~~~---~~~-~~~--~~~~-----~g-~~-~~---~~~~~~~ 376 (546)
T 2jbv_A 322 PMVAES---TQWWEIGIFTPTEDG--LD----RPDLMMHYG---SVP-FDM--NTLR-----HG-YP-TT---ENGFSLT 376 (546)
T ss_dssp CCCSCC---SSSCCEEEEECSSTT--CS----SCSEEEEEE---SSC-CCT--TTGG-----GT-CC-CC---SSEEEEE
T ss_pred CCcccc---cchhheEEEEecCCC--CC----CCceEEEec---ccc-ccc--cccc-----cC-cc-CC---CCeEEEE
Confidence 421100 000000001000000 00 000100000 000 000 0000 00 00 00 1112244
Q ss_pred EeecCCCcceEEEecCCCCCCCCeeecCCCCCHH--HHHHHHHHHHHHHHHHcCccccccccccchhHHHHHhhhhcccc
Q 007210 444 EKIASPISTGELSLINTNVDDNPSVSFNYFSHPL--DLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANV 521 (612)
Q Consensus 444 ~~~~~p~s~g~v~l~s~d~~~~p~i~~~y~~~~~--D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 521 (612)
..+.+|.|||+|+|+++||++.|.|+++|+.++. |++.++++++.+++++++.+++.+.. .. ..|+
T Consensus 377 ~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~-~~-----------~~p~ 444 (546)
T 2jbv_A 377 PNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTG-RE-----------LSPG 444 (546)
T ss_dssp EEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEE-EE-----------EESC
T ss_pred EEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhccc-cc-----------ccCC
Confidence 5678999999999999999999999999999999 99999999999999999988877652 00 0122
Q ss_pred cCCCCCCCCHHHHHHHHHhccccccccccccccC------CccCCCCeEeCcCCCeEeecccCCCCCCCChHHHHHHHHH
Q 007210 522 NLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG------KVVSTEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGR 595 (612)
Q Consensus 522 ~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG------~VVD~~~rV~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~ 595 (612)
....+|++|++|++....+.+|++|||||| +|||++|||||++||||||+||||+++++||++|+|||||
T Consensus 445 ----~~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAe 520 (546)
T 2jbv_A 445 ----VEAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGE 520 (546)
T ss_dssp ----TTCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHH
T ss_pred ----CCCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHH
Confidence 235789999999999999999999999999 7999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 007210 596 YMGVKILRQRL 606 (612)
Q Consensus 596 r~a~~i~~~~~ 606 (612)
|+||+|+++..
T Consensus 521 raAd~I~~~~~ 531 (546)
T 2jbv_A 521 RCADLIRSARA 531 (546)
T ss_dssp HHHHHC-----
T ss_pred HHHHHHHhhcc
Confidence 99999887653
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=3.4e-63 Score=545.43 Aligned_cols=476 Identities=21% Similarity=0.261 Sum_probs=313.6
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCCCCc---------------chhHHHHHHHhcCCCCCCcccc
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFSDVN---------------VSFLQNFHMTLADTSPQSASQY 141 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~ 141 (612)
+.+|||||||||++|+++|.+|++ |.+|+|||+|+....... ...+..+...+... ..
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~------~~ 78 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDS------NP 78 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCCSGGGTCCCCCGGGGGGTCCTTTCGGGGGGGGTCS------CC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCCcccccccccccccccccceeeccchhHHHhhcCC------Cc
Confidence 457999999999999999999999 999999999975321000 00000000000000 00
Q ss_pred ccCCCceeecccceecccccccceeeecCChhhhcC-----CCCChhhhcccchhhhhccccC--C------CCchhHHH
Q 007210 142 FISTDGVLNARARVLGGGSSINAGFYTRASSQFIER-----MGWDAKLVNESFPWVERQIVHQ--P------KQEGWQKA 208 (612)
Q Consensus 142 ~~~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~-----~gw~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~ 208 (612)
..........+|++|||+|.+|+|++.|+.+.+++. .+|.|++ +||++.++..... + ...+....
T Consensus 79 ~~~~~~~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W~~~w~~~~--p~~~k~e~~~~~~~~~~~~g~~~~~~~~~~ 156 (546)
T 1kdg_A 79 FWWCKDITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHA--PYTSKLSSRLPSTDHPSTDGQRYLEQSFNV 156 (546)
T ss_dssp TTBCTTBSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTCCGGGSCCH--HHHHHHHHHSCCBSCCSTTSCCCSCHHHHH
T ss_pred cccccccccccceeecccccccceEEecCChHHhcCcccCccccCccc--HHHHHHHhcCCCCccCCCCCCccCCHHHHH
Confidence 011123456789999999999999999999877654 2455555 8999988754211 0 12344566
Q ss_pred HHHHHHHcCCCCCCCC-cc-cCCCceecceeEECCCCceecHH-Hhhhhc-CCCCcEEEeccEEEEEEecCCCCCCeEEE
Q 007210 209 LRDSLLDVGVSPFNGF-TY-DHIYGTKIGGTIFDRFGRRHTAA-ELLASA-NPQKITVLIRATVQKIVFDTSGKRPKAVG 284 (612)
Q Consensus 209 ~~~~~~~~g~~~~~~~-~~-~~~~g~~~~~~~~~~~g~r~~~~-~~l~~a-~~~g~~v~~~~~V~~l~~~~~g~~~~v~G 284 (612)
+.++++++|++..... .. ....++... ...+.++.|+++. .|+..+ ++.|++|++++.|++|+++++ +++|
T Consensus 157 ~~~a~~~~G~~~~~~~~~~~~~~~g~~~~-~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~----~~~g 231 (546)
T 1kdg_A 157 VSQLLKGQGYNQATINDNPNYKDHVFGYS-AFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNGS----QILG 231 (546)
T ss_dssp HHHHHHTTTCEECCGGGSTTCCTTEEEEC-CBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEETT----EEEE
T ss_pred HHHHHHHCCCCcCCccCCcCCCCcEEeee-eeccCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeCC----EEEE
Confidence 7788888887532100 00 011122111 1112467888765 477665 457999999999999999864 9999
Q ss_pred EEEEeC-CCCe--EEEEeecCCCceEEecCCCcCChHHHHHcCCCChhhhhhC------Cceee-----ecCcccccccc
Q 007210 285 VIFKDE-NGNQ--HQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKL------NISVV-----LDNAHIGKGMA 350 (612)
Q Consensus 285 V~~~~~-~g~~--~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG~~~~L~~~------GI~~~-----~~~p~VG~nl~ 350 (612)
|++.+. +|+. .+++ ++|+||||||+++||+||++|||||+++|+++ ||+++ +|+| ||+|||
T Consensus 232 V~~~~~~~g~~~~~~v~----~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlp-VG~nL~ 306 (546)
T 1kdg_A 232 VQTNDPTLGPNGFIPVT----PKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLP-VGMNAQ 306 (546)
T ss_dssp EEESCTTSSGGGEEEEE----EEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCC-TTTTBB
T ss_pred EEEEecCCCceeEEEEE----eCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCC-cccCcc
Confidence 999753 4653 2343 57999999999999999999999999999999 69884 7999 999999
Q ss_pred cCCCceEEeecCCCc-c-chhhh-hhc--cchhhhHHHhccCCCCCCCcccccccchhccccccccCCCCCCChHHHHHH
Q 007210 351 DNPMNAVFVPSNRPV-E-QSLIE-TVG--ITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRTPEAIQDY 425 (612)
Q Consensus 351 dh~~~~~~~~~~~~~-~-~~~~~-~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (612)
||+...+.+..+ +. . ..... ... ......|.....|+..... ...+++..... .... ... ++..
T Consensus 307 DH~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~~----~~~~--~~~-~~~~ 375 (546)
T 1kdg_A 307 DNPSINLVFTHP-SIDAYENWADVWSNPRPADAAQYLANQSGVFAGAS---PKLNFWRAYSG----SDGF--TRY-AQGT 375 (546)
T ss_dssp CCCCEEEEEECT-TCCCGGGGTTTTTSCCHHHHHHHHHHSCSGGGSCS---CCEEEEEEEEC----TTSC--EEE-EEEE
T ss_pred cCcceeEEEecC-CcccccchhhhhcchhHHHHHHHHHcCCcccccCC---cceEEEEccCC----CCcc--hhh-hhhe
Confidence 999887776622 21 1 00000 000 0112234433333211100 00011110000 0000 000 0000
Q ss_pred hhh----ccC-CCCCcccceeEEEeecCC-CcceEEEecCCCCCCCCeeecCCCCCHHHHHHHHHHHHHHHHHHcCcccc
Q 007210 426 IRN----KRT-LPHEAFKGGFILEKIASP-ISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVRMAAKIVQSKHFL 499 (612)
Q Consensus 426 ~~~----~~~-~~~~~~~~~~~~~~~~~p-~s~g~v~l~s~d~~~~p~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~ 499 (612)
+.. ... .+........+...+.+| .|||+|+|+++| ..|.|+++|+.++.|++.++++++.+++++++.+..
T Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~ 453 (546)
T 1kdg_A 376 VRPGAASVNSSLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGL 453 (546)
T ss_dssp EEESCSCCCCSSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTTC
T ss_pred ecccccccccccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHHhcCCCcc
Confidence 000 000 000000111233456778 999999999877 457789999999999999999999999999876533
Q ss_pred ccccccchhHHHHHhhhhcccccCCCCCCCCHHHHHHHHHhccccccccccccccC-----CccCCCCeEeCcCCCeEee
Q 007210 500 NYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVG-----KVVSTEYKVLGIDRLRVVD 574 (612)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG-----~VVD~~~rV~g~~nL~V~D 574 (612)
.+. .| ....+++++.+|++....+.+|++|||||| +|||++|||||++||||||
T Consensus 454 ~~~----------------~p-----~~~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~~~VVD~~lrV~Gv~nLrVvD 512 (546)
T 1kdg_A 454 TMI----------------TP-----DVTQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQSAVVDSNVKVFGTNNLFIVD 512 (546)
T ss_dssp EEE----------------ES-----CTTSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTTTCSBCTTCBBTTCSSEEECS
T ss_pred ccc----------------CC-----CCCCCHHHHHHHHHHhcCcccccccceecCCCCCCeeECCCCeEccCCCcEEeE
Confidence 322 12 223578889899988888999999999999 7999999999999999999
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 007210 575 GSTYDESPGTNPQGTVLMMGRYMGVKILRQR 605 (612)
Q Consensus 575 aSv~P~~~~~NP~~Ti~ala~r~a~~i~~~~ 605 (612)
+||||+++++||++|+||||||+||+|+++.
T Consensus 513 aSv~P~~~~~np~~ti~aiAeraAd~I~~~~ 543 (546)
T 1kdg_A 513 AGIIPHLPTGNPQGTLMSAAEQAAAKILALA 543 (546)
T ss_dssp GGGCSSCCSSCSHHHHHHHHHHHHHHHHHST
T ss_pred ecccCCCCCccHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999887653
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=4.9e-60 Score=514.04 Aligned_cols=436 Identities=18% Similarity=0.202 Sum_probs=292.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC-CCcchhHHHHH--HHhcCCCCCCccc-------------
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS-DVNVSFLQNFH--MTLADTSPQSASQ------------- 140 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~------------- 140 (612)
..+|||||||+|.+|+++|.+|++ |.+|+|||+|+.... .+....+.... ....+|.+.+.++
T Consensus 3 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~t~p~~~~~~l~~~~~~~ 82 (504)
T 1n4w_A 3 GGYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWNQPGPDGNIFCGMLNPDKRSSWFKNRTEAPLGSFLWLDVVNR 82 (504)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCCCCCTTSSSSCCTTSCCGGGSBSCSBCCCCTTCHHHHGGGCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCCCCCcccccccccccCccccccccccccccccccccccccc
Confidence 357999999999999999999999 999999999985432 22222211110 0011222222222
Q ss_pred ---ccc------CCCceeecccceecccccccceeeecCChhhhcC--CCCChhhhc-ccchhhhhccccCCCC------
Q 007210 141 ---YFI------STDGVLNARARVLGGGSSINAGFYTRASSQFIER--MGWDAKLVN-ESFPWVERQIVHQPKQ------ 202 (612)
Q Consensus 141 ---~~~------~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~--~gw~~~~~~-~~~~~~~~~~~~~~~~------ 202 (612)
.+. .++.+.+++|++|||+|.+|+|+|.|+.+.+++. .+|.|++++ |||+++|+.+.+.+..
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~~~ 162 (504)
T 1n4w_A 83 NIDPYAGVLDRVNYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEILPRVDSSEMYDRYFPRANSMLRVNHIDTKWFED 162 (504)
T ss_dssp BCCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHH
T ss_pred cccccccccceecCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhccccchhhhhhHHHHHHHHHhCCCCCCcccccC
Confidence 222 4567788999999999999999999999977753 578899999 9999999987654321
Q ss_pred ---chhHHHHHHHHHHcCCCC----CC-CCc---------ccCCCceecceeEECCCCceecHH-Hhhhhc-CCCCcEEE
Q 007210 203 ---EGWQKALRDSLLDVGVSP----FN-GFT---------YDHIYGTKIGGTIFDRFGRRHTAA-ELLASA-NPQKITVL 263 (612)
Q Consensus 203 ---~~~~~~~~~~~~~~g~~~----~~-~~~---------~~~~~g~~~~~~~~~~~g~r~~~~-~~l~~a-~~~g~~v~ 263 (612)
.+..+.+.++++++|+++ .+ .+. ...+..|..+.. .+.+| |+++. .|+..+ ++.|++|+
T Consensus 163 ~~~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~-g~~~g-r~s~~~~~l~~a~~~~n~~i~ 240 (504)
T 1n4w_A 163 TEWYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIY-GNNHG-KQSLDKTYLAAALGTGKVTIQ 240 (504)
T ss_dssp CGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTT-CCSSS-BCCTTTTHHHHHHHTTSEEEE
T ss_pred CCcchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccc-cCCCC-ccCHHHHHHHHHHhcCCcEEE
Confidence 234567888999999842 11 110 000111111111 13567 77654 477665 45579999
Q ss_pred eccEEEEEEecCCCCCCeEEEEEEEeCCC---CeEEEEeecCCCceEEecCCCcCChHHHHHcC-CCChhhhhhCCceee
Q 007210 264 IRATVQKIVFDTSGKRPKAVGVIFKDENG---NQHQAFLAGNPKSEVILSCGAIGTPQMLKLSG-VGPKAELEKLNISVV 339 (612)
Q Consensus 264 ~~~~V~~l~~~~~g~~~~v~GV~~~~~~g---~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SG-IG~~~~L~~~GI~~~ 339 (612)
+++.|++|++++++ .+++||++.+.+| +..++. +|+||||||+|+||+||++|| || ||+++
T Consensus 241 ~~~~V~~i~~~~~g--~~~~gV~~~~~~g~~~~~~~v~-----A~~VIlaaG~~~s~~lL~~Sg~ig--------~i~~~ 305 (504)
T 1n4w_A 241 TLHQVKTIRQTKDG--GYALTVEQKDTDGKLLATKEIS-----CRYLFLGAGSLGSTELLVRARDTG--------TLPNL 305 (504)
T ss_dssp ESEEEEEEEECTTS--SEEEEEEEECTTCCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTT--------SSTTC
T ss_pred eCCEEEEEEECCCC--CEEEEEEEeCCCCccceeEEEe-----eCEEEEccCCCCCHHHHHhccccC--------CCCCC
Confidence 99999999998632 2899999986566 345554 479999999999999999999 88 67755
Q ss_pred ecCcccccccccCCCceEEeecCCCccchhhhhhccchhhhHHHhccCCCCCCCcccccccchhc-c--ccccc-cCCCC
Q 007210 340 LDNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSA-E--IGQLS-TIPPK 415 (612)
Q Consensus 340 ~~~p~VG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~--~~~~~-~~~~~ 415 (612)
+++||+||+||+...+.+.... ... .+ .+. .+... ..+..+.. . ...+. ..++
T Consensus 306 --~~~VG~nl~dh~~~~~~~~~~~-~~~-----~~-----~~~---~~~~~------~~~~~~~~~~~~~~~~~~~~~~- 362 (504)
T 1n4w_A 306 --NSEVGAGWGPNGNIMTARANHM-WNP-----TG-----AHQ---SSIPA------LGIDAWDNSDSSVFAEIAPMPA- 362 (504)
T ss_dssp --CTTTTCCBBCTTCEEEEEECCT-TCC-----CC-----SCC---CSSCC------EEEEECCSSTTCEEEEEECCCC-
T ss_pred --ChhhccccccCCcceeeeccCC-CCc-----cc-----CcC---CCccE------EEEeccCCCCCceEEEeccCCh-
Confidence 5689999999998665432211 000 00 000 00000 00000000 0 00000 0000
Q ss_pred CCChHHHHHHhhhccCCCCCcccceeEEEeecCCCcceEEEecCCCCCCCCeeecCCCCCHHHHHHHHHHHH-HHHHHHc
Q 007210 416 QRTPEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVR-MAAKIVQ 494 (612)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~p~i~~~y~~~~~D~~~~~~~~~-~~~~i~~ 494 (612)
.+. ....++..+.+|.|||+|+|+++|+ .|+++|+.++ | +.+.++++ .++++++
T Consensus 363 ---------------~~~----~~~~~~~~~~~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~ 417 (504)
T 1n4w_A 363 ---------------GLE----TWVSLYLAITKNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINK 417 (504)
T ss_dssp ---------------SSC----CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHH
T ss_pred ---------------HHH----hhhhhheeeeccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHh
Confidence 000 1123445567899999999998664 7999999999 8 77888888 8888887
Q ss_pred CccccccccccchhHHHHHhhhhcccccCCCCCCCCHHHHHHHHHhccccccccccccccCCccCCCCeEeCcCCCeEee
Q 007210 495 SKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVD 574 (612)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~VVD~~~rV~g~~nL~V~D 574 (612)
+.+. +. . .+...++ ++++ ...+.+|++||||||+|||++|||||++||||||
T Consensus 418 ~~~~--~~------------------~----~~~~~~~-~~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvD 469 (504)
T 1n4w_A 418 ANGT--IY------------------R----YDLFGTQ-LKAF---ADDFCYHPLGGCVLGKATDDYGRVAGYKNLYVTD 469 (504)
T ss_dssp HHTC--CB------------------C----CSSSSSS-CCSE---ECSEESSCBCSSCTTTTBCTTSBBTTCSSEEECS
T ss_pred ccCC--Cc------------------C----Cchhhhh-hhhh---ccCccccccCCceeeeEECCCCeEeccCCeEEee
Confidence 6543 11 0 0000000 0001 3567899999999999999999999999999999
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHHHHHHHHh
Q 007210 575 GSTYDESPGTNPQGTVLMMGRYMGVKILRQRL 606 (612)
Q Consensus 575 aSv~P~~~~~NP~~Ti~ala~r~a~~i~~~~~ 606 (612)
+||||+++++||++|+||||||+||+|+++..
T Consensus 470 aSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 470 GSLIPGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp GGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccCCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999988765
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=1.3e-58 Score=502.90 Aligned_cols=439 Identities=17% Similarity=0.182 Sum_probs=289.0
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC-CCcchhHHH-H-HHHhcCCCCCCccc-------------
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS-DVNVSFLQN-F-HMTLADTSPQSASQ------------- 140 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~------------- 140 (612)
..+||+||||+|.+|+++|.+|++ |.+|+|||+|+.... .+....... . .....+|.+.+.+|
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~~~~p~~~~~~~~~~~~~~~~w~~~~~pq~~~~~~~~~~~~~ 88 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRSWDTPGSDGKIFCGMLNPDKRSMWLADKTDQPVSNFMGFGINKS 88 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCSCSCCTTSCSSCCSSSCCTTSBBSCSBCCCSSCSBTTBSCCCB
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCCCCccccccccccccccccccccccccccccccccccccc
Confidence 467999999999999999999999 999999999985421 110000000 0 00001222333222
Q ss_pred --ccc------CCCceeecccceecccccccceeeecCChhhhcC--CCCChhhhc-ccchhhhhccccCCCC-------
Q 007210 141 --YFI------STDGVLNARARVLGGGSSINAGFYTRASSQFIER--MGWDAKLVN-ESFPWVERQIVHQPKQ------- 202 (612)
Q Consensus 141 --~~~------~~~~~~~~~g~~lGG~s~~~~~~~~r~~~~~~~~--~gw~~~~~~-~~~~~~~~~~~~~~~~------- 202 (612)
.+. .++.+.+++|++|||+|.+|+|+|.|+.+.+++. .+|.|++++ |||+++|+.+.+.+..
T Consensus 89 ~~~~~g~~~~~~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~~~~ 168 (507)
T 1coy_A 89 IDRYVGVLDSERFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEILPSVDSNEMYNKYFPRANTGLGVNNIDQAWFEST 168 (507)
T ss_dssp CCCCBCSEEEEECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHCTTSCHHHHHHTHHHHHHHHHTCBCCCHHHHHHC
T ss_pred cccccceeeEecCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhCCccchhcchhHHHHHHHHHhCCCCCCCcccccc
Confidence 222 4567788999999999999999999999977753 468899999 9999999987754322
Q ss_pred --chhHHHHHHHHHHcCCCC----CC-CCc---------ccCCCceecceeEECCCCceecHH-Hhhhhc-CCCCcEEEe
Q 007210 203 --EGWQKALRDSLLDVGVSP----FN-GFT---------YDHIYGTKIGGTIFDRFGRRHTAA-ELLASA-NPQKITVLI 264 (612)
Q Consensus 203 --~~~~~~~~~~~~~~g~~~----~~-~~~---------~~~~~g~~~~~~~~~~~g~r~~~~-~~l~~a-~~~g~~v~~ 264 (612)
.+....+.++++++|+.+ .+ .+. ...+..|..|.. -+.+| |+++. .|+..+ ++.|++|++
T Consensus 169 ~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~-gc~~g-R~s~~~~~l~~a~~~~n~~i~~ 246 (507)
T 1coy_A 169 EWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIY-GNNAG-KKSLDKTYLAQAAATGKLTITT 246 (507)
T ss_dssp GGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTT-CCSSS-BCCTTTTHHHHHHHTTCEEEEC
T ss_pred ccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccc-cCCCC-CcChHHHHHHHHHhcCCcEEEe
Confidence 234567888999999832 11 110 000111111111 13567 77654 477655 456899999
Q ss_pred ccEEEEEEecCCCCCCeEEEEEEEeCCCC---eEEEEeecCCCceEEecCCCcCChHHHHHcC-CCChhhhhhCCceeee
Q 007210 265 RATVQKIVFDTSGKRPKAVGVIFKDENGN---QHQAFLAGNPKSEVILSCGAIGTPQMLKLSG-VGPKAELEKLNISVVL 340 (612)
Q Consensus 265 ~~~V~~l~~~~~g~~~~v~GV~~~~~~g~---~~~v~~~~~a~k~VILaaG~~~sp~lLl~SG-IG~~~~L~~~GI~~~~ 340 (612)
++.|++|++++++ .+++||++.+.+|. .+++. +|+||||||+|+||+||++|| ||+ +| +
T Consensus 247 ~~~v~~i~~~~~g--~~~~gV~~~~~~g~~~~~~~~~-----A~~VIlaaGa~~sp~lL~~Sg~iG~--------lp--n 309 (507)
T 1coy_A 247 LHRVTKVAPATGS--GYSVTMEQIDEQGNVVATKVVT-----ADRVFFAAGSVGTSKLLVSMKAQGH--------LP--N 309 (507)
T ss_dssp SEEEEEEEECSSS--SEEEEEEEECTTSCEEEEEEEE-----EEEEEECSHHHHHHHHHHHHHHTTS--------ST--T
T ss_pred CCEEEEEEECCCC--CEEEEEEEeCCCCcccccEEEE-----eCEEEEccCccCCHHHHHhcccCCC--------CC--c
Confidence 9999999998632 28999999865663 45554 479999999999999999999 982 44 3
Q ss_pred cCcccccccccCCCceEEee-cC-CCccchhhhhhccchhhhHHHhccCCCCCCCcccccccchhccccccccCCCCCCC
Q 007210 341 DNAHIGKGMADNPMNAVFVP-SN-RPVEQSLIETVGITKLGVYIEASSGFGESRDSIHCHHGIMSAEIGQLSTIPPKQRT 418 (612)
Q Consensus 341 ~~p~VG~nl~dh~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (612)
.+++||+||+||+....... .. ++... ... ...... ...+.. . . ...+... . ..+.
T Consensus 310 l~d~VG~~l~~h~~~~~~~~~~~~~~~~~--~~~-~~~~~~-----~~~~~~-~---~--~~~~~~~---~-~~~~---- 367 (507)
T 1coy_A 310 LSSQVGEGWGNNGNIMVGRANHMWDATGS--KQA-TIPTMG-----IDNWAD-P---T--APIFAEI---A-PLPA---- 367 (507)
T ss_dssp SCTTTTCCBBCTTEEEEEEECCTTSCCCS--CCC-SSCCEE-----EECTTC-T---T--SCEEEEE---E-CCCC----
T ss_pred cChhhCCccccCCcccccccccccccccc--cCC-CcceEE-----EeccCC-C---C--CCcEEEe---c-cCCH----
Confidence 35689999999986432211 11 00000 000 000000 000000 0 0 0000000 0 0000
Q ss_pred hHHHHHHhhhccCCCCCcccceeEEEeecCCCcceEEEecCCCCCCCCeeecCCCCCHHHHHHHHHHHH-HHHHHHcCcc
Q 007210 419 PEAIQDYIRNKRTLPHEAFKGGFILEKIASPISTGELSLINTNVDDNPSVSFNYFSHPLDLKRCVDGVR-MAAKIVQSKH 497 (612)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~s~d~~~~p~i~~~y~~~~~D~~~~~~~~~-~~~~i~~~~~ 497 (612)
.+. ....++..+.+|.|||+|+|+++|+ .|+++|+.++ | +.+.++++ .+++++++.+
T Consensus 368 ------------~~~----~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~ 425 (507)
T 1coy_A 368 ------------GLE----TYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEG 425 (507)
T ss_dssp ------------SSC----CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHT
T ss_pred ------------HHh----hheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHHHHHHhhcC
Confidence 000 1122344567899999999988654 8999999999 8 46777777 8899988755
Q ss_pred ccccccccchhHHHHHhhhhcccccCCCCCCCCHHHHHHHHHhccccccccccccccCCccCCCCeEeCcCCCeEeeccc
Q 007210 498 FLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVITIWHYHGGCHVGKVVSTEYKVLGIDRLRVVDGST 577 (612)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~~~~~~~~H~~Gt~rMG~VVD~~~rV~g~~nL~V~DaSv 577 (612)
. +.. . +. ..+++ ++| ...+.+|++||||||+|||++|||||++||||||+||
T Consensus 426 ~--~~~-----------------~---~~-~~~d~--~~~---~~~~~~H~~GTcrMG~VVD~~~rV~Gv~nLrVvDaSv 477 (507)
T 1coy_A 426 T--IYR-----------------T---DL-FGVYY--KTW---GDDFTYHPLGGVLLNKATDNFGRLPEYPGLYVVDGSL 477 (507)
T ss_dssp C--CBC-----------------S---SC-C--CC--CSS---BCSEESCCBCSSCTTTTSCTTSBCTTSTTEEECSGGG
T ss_pred C--ccc-----------------C---cc-cccch--hhh---cccccccccCCcchhheECCCCeEeccCCeEEeechh
Confidence 2 221 0 00 01111 122 4567899999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHHHHHHHHHhh
Q 007210 578 YDESPGTNPQGTVLMMGRYMGVKILRQRLG 607 (612)
Q Consensus 578 ~P~~~~~NP~~Ti~ala~r~a~~i~~~~~~ 607 (612)
||+++++||++||||||||+||+|++++++
T Consensus 478 ~P~~~~~Np~~ti~alAeraAd~I~~~~~~ 507 (507)
T 1coy_A 478 VPGNVGVNPFVTITALAERNMDKIISSDIQ 507 (507)
T ss_dssp SCSCCSSCSHHHHHHHHHHHHHHHHHHTC-
T ss_pred ccCCCCcChHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999998763
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=9.2e-48 Score=425.64 Aligned_cols=477 Identities=14% Similarity=0.145 Sum_probs=281.0
Q ss_pred CCCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCCCCc---chhHH-----------HHHHHhcCCC-------
Q 007210 77 HHSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFSDVN---VSFLQ-----------NFHMTLADTS------- 134 (612)
Q Consensus 77 ~~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~~~~---~~~~~-----------~~~~~~~~~~------- 134 (612)
+..+|||||||+|++|+.+|..|++ |++|+||||++...+... ..... .....+....
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~l~~~~ 122 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLV 122 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSSTTCCTTCSHHHHHSGGGTHHHHHHTCEESCCCCCCCC
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcccccccccccCCCccHHHHHHHHHHhhhhccccccccc
Confidence 3467999999999999999999999 999999999986543210 00000 0000000000
Q ss_pred -----CCCcccc--ccCC------Ccee----ecccceecccccccceeeecCChhhh--cCCCC---Chhhhcccchhh
Q 007210 135 -----PQSASQY--FIST------DGVL----NARARVLGGGSSINAGFYTRASSQFI--ERMGW---DAKLVNESFPWV 192 (612)
Q Consensus 135 -----~~~~~~~--~~~~------~~~~----~~~g~~lGG~s~~~~~~~~r~~~~~~--~~~gw---~~~~~~~~~~~~ 192 (612)
+..+.+. .... ..+. ...+..+||.+.+|.+...|..+... ...+| .++++.++|+..
T Consensus 123 ~~~~~~~~~~~~~v~l~~g~~~~~~~~~~l~~~~~~~~vGG~~~~~~g~~~r~~~~e~~~~l~~~~v~~~~~l~~~~~~~ 202 (623)
T 3pl8_A 123 VDTLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKA 202 (623)
T ss_dssp CCCSCTTSCCCSSCCSCTTCCTTCCTTSCCTTCEECCSTTGGGGTCCCBCCCCCGGGSCCSSTTCHHHHHHHHHHHHHHH
T ss_pred cccccccccccCcEEeccCCCcccccchhhhhhcccccccCcceeeccccccCChHHhhhhhcccCccChhhHHHHHHHH
Confidence 0000000 0000 0011 12456789999999988887776321 11122 245566777766
Q ss_pred hhccccCCC--CchhH-HHHHHHHHHcCCCCCCCCcccCCCceecceeEECCCCceecH-HHhhhhc-------CCCCcE
Q 007210 193 ERQIVHQPK--QEGWQ-KALRDSLLDVGVSPFNGFTYDHIYGTKIGGTIFDRFGRRHTA-AELLASA-------NPQKIT 261 (612)
Q Consensus 193 ~~~~~~~~~--~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~g~r~~~-~~~l~~a-------~~~g~~ 261 (612)
+........ ..... ......+........ . +.. .+...........|+++ ..++..+ ++.|++
T Consensus 203 ~~l~~vgg~~~~~~~~~~~~~~~l~~~~~~~~-~--~~~---~p~a~~~~~~~~~r~s~~~~~l~~~~~l~~~~~~~nv~ 276 (623)
T 3pl8_A 203 ESYFQTGTDQFKESIRHNLVLNKLTEEYKGQR-D--FQQ---IPLAATRRSPTFVEWSSANTVFDLQNRPNTDAPEERFN 276 (623)
T ss_dssp HHHHTEESCTTTTCHHHHHHHHHHHHHTTTTS-C--CEE---CCEEEEEEETTEEEECCHHHHCCCCCEEETTEEEEEEE
T ss_pred HHhcccccccccCccccccchHHHHHhhhhcc-c--ccc---cchhhccCCCCccccchHHhhhhhhhcchhhccCCCEE
Confidence 655432211 11111 111112221111000 0 000 00000011112223333 3354433 335999
Q ss_pred EEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCCChhhhhhCCceeee
Q 007210 262 VLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVGPKAELEKLNISVVL 340 (612)
Q Consensus 262 v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG~~~~L~~~GI~~~~ 340 (612)
|++++.|++|++++++ .+++||++.+ .+|+.+++ .+++||||+|++.||+||++||||++.+|+.+||++
T Consensus 277 v~~~~~V~~i~~~~~~--~~v~GV~~~~~~~g~~~~i-----~A~~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~-- 347 (623)
T 3pl8_A 277 LFPAVACERVVRNALN--SEIESLHIHDLISGDRFEI-----KADVYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE-- 347 (623)
T ss_dssp EECSEEEEEEEECTTS--SCEEEEEEEETTTCCEEEE-----CEEEEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS--
T ss_pred EEeCCEEEEEEEECCC--CEEEEEEEEEcCCCcEEEE-----ECCEEEEcCCCcCCHHHHHhcCCCccccccccCCCC--
Confidence 9999999999997532 3899999987 46777666 458999999999999999999999999999999998
Q ss_pred cCcccccccccCCCceEEeecCCCccchhhhhhccchhhhHHHhccCCCCCC--------Ccc-cccccchhc-------
Q 007210 341 DNAHIGKGMADNPMNAVFVPSNRPVEQSLIETVGITKLGVYIEASSGFGESR--------DSI-HCHHGIMSA------- 404 (612)
Q Consensus 341 ~~p~VG~nl~dh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--------~~~-~~~~~~~~~------- 404 (612)
++|+||+||+||+...+.+.++++....+.+.+. ..||..+. ..+ ......|..
T Consensus 348 ~l~~vG~nl~dh~~~~~~~~~~~~~~~~~~~~~~----------~~g~~g~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~ 417 (623)
T 3pl8_A 348 LLPSLGSYITEQSLVFCQTVMSTELIDSVKSDMT----------IRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNHMM 417 (623)
T ss_dssp SCTTTTBSCBCCCEEEEEEEECHHHHHHHTTTCE----------EESCTTSTTCEEECCTTCTTCSSCHHHHHHHHHHHH
T ss_pred CCcccccchhhCcCceEEEEECCccccccccccc----------ccccCCCcceecccccCcccccCCchhhhhhhhhhh
Confidence 9999999999999988877766542111110000 01111000 000 000000000
Q ss_pred --ccccc----ccCCCCCCChHHHHH--Hh-hhccC-CC----CC----cccceeEEEeecCCCcceEEEecC--CCCCC
Q 007210 405 --EIGQL----STIPPKQRTPEAIQD--YI-RNKRT-LP----HE----AFKGGFILEKIASPISTGELSLIN--TNVDD 464 (612)
Q Consensus 405 --~~~~~----~~~~~~~~~~~~~~~--~~-~~~~~-~~----~~----~~~~~~~~~~~~~p~s~g~v~l~s--~d~~~ 464 (612)
+...+ ..+.+....+ +... +. +.... +. .+ .....+.+.....|.++|+|+|++ +|+++
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~n~v~L~~~~~D~~g 496 (623)
T 3pl8_A 418 QHQEDPLPIPFEDPEPQVTTL-FQPSHPWHTQIHRDAFSYGAVQQSIDSRLIVDWRFFGRTEPKEENKLWFSDKITDAYN 496 (623)
T ss_dssp HCTTCCCSSCTTCCCCEEECC-CBTTBCEEEEEECCSCCCSCCCCSSCGGGEEEEEEEECCCCCTTCEEEEEEEEECTTS
T ss_pred ccccccccccccccccccccc-ccccCcchhhhhhhhccccccccccccceEEEEEEEEeeccCCCCEEEECCCCcCCCC
Confidence 00000 0000000000 0000 00 00000 00 00 000111222344599999999987 89999
Q ss_pred CCeeecCCCCCHH-HHHHHHHHHHHHHHHHcCccccccccccchhHHHHHhhhhcccccCCCCCCCCHHHHHHHHHhccc
Q 007210 465 NPSVSFNYFSHPL-DLKRCVDGVRMAAKIVQSKHFLNYTQCDQKSVEAILNASVRANVNLVPKHTNDTKSLEQFCKDTVI 543 (612)
Q Consensus 465 ~p~i~~~y~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~~~~~~~~~~ 543 (612)
.|+++++|..++. |++.+.++++.++++++..+...... .+. + ....
T Consensus 497 ~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~--------------------~~~----------~--~~~~ 544 (623)
T 3pl8_A 497 MPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGS--------------------LPQ----------F--MEPG 544 (623)
T ss_dssp SEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTS--------------------CSE----------E--CCTT
T ss_pred CceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCc--------------------hhh----------c--cCCC
Confidence 9999999999999 99999999999999998765432210 000 0 0124
Q ss_pred cccccccccccC------Ccc-CCCCeEeCcCCCeEeecccCCCCCCCChHHHHHHHHHHHHHHHHHHHhhccCC
Q 007210 544 TIWHYHGGCHVG------KVV-STEYKVLGIDRLRVVDGSTYDESPGTNPQGTVLMMGRYMGVKILRQRLGKAAG 611 (612)
Q Consensus 544 ~~~H~~Gt~rMG------~VV-D~~~rV~g~~nL~V~DaSv~P~~~~~NP~~Ti~ala~r~a~~i~~~~~~~~~~ 611 (612)
+++|++|||||| +|| |++|||||++||||+|+|+||+++++||++||||||+|+|++|+++....+.+
T Consensus 545 ~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~~~~~ 619 (623)
T 3pl8_A 545 LVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSPFT 619 (623)
T ss_dssp TTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCCCCC-
T ss_pred CcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 689999999999 587 99999999999999999999999999999999999999999999887655543
No 12
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.68 E-value=1.6e-16 Score=172.59 Aligned_cols=195 Identities=21% Similarity=0.284 Sum_probs=111.2
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCCCCcchhHHHHHHHhcCCCCCCccccccCCCceeeccccee
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDGVLNARARVL 156 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 156 (612)
+.+|||||||||++|+++|++|++ |.+|+||||++ .+
T Consensus 39 ~~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~------------------------------------------~~ 76 (510)
T 4at0_A 39 DYEADVVVAGYGIAGVAASIEAARAGADVLVLERTS------------------------------------------GW 76 (510)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS------------------------------------------SS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC------------------------------------------CC
Confidence 678999999999999999999999 99999999997 34
Q ss_pred cccccccceeeecCC-hhhhcCCCCChhhhcccchhhhhccccCCCCch------hHHHHHHHHHHcCCCCCCCCc----
Q 007210 157 GGGSSINAGFYTRAS-SQFIERMGWDAKLVNESFPWVERQIVHQPKQEG------WQKALRDSLLDVGVSPFNGFT---- 225 (612)
Q Consensus 157 GG~s~~~~~~~~r~~-~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~---- 225 (612)
||+|.++++.++.+. .......+.. +..+.+++++.+.......... ......+++.+.|++......
T Consensus 77 GG~s~~s~G~~~~~~~~~~~~~~g~~-ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~~~ 155 (510)
T 4at0_A 77 GGATALAGGFIYLGGGTPLQKACGFD-DSPENMKTFMMAALGPGADEEKITDYCEGSVEHYNWLVDCGVPFKESFWGEPG 155 (510)
T ss_dssp CTTGGGSCCCEECCSSCHHHHHTTCC-CCHHHHHHHHHHHSCSSCCHHHHHHHHHTHHHHHHHHHHTTCCCCSCEECSSS
T ss_pred CCcchhcCcceecCCCCHHHHHhCCC-CCHHHHHHHHHHHhCCCCCHHHHHHHHHhhHHHHHHHHHcCCeecccccCCcc
Confidence 666666666554432 1222111111 1122223332222111111110 112334667777764211100
Q ss_pred --ccCCCce----------------ecceeEECC-----CCce----ecHHHhhhhcCCCCcEEEeccEEEEEEecCCCC
Q 007210 226 --YDHIYGT----------------KIGGTIFDR-----FGRR----HTAAELLASANPQKITVLIRATVQKIVFDTSGK 278 (612)
Q Consensus 226 --~~~~~g~----------------~~~~~~~~~-----~g~r----~~~~~~l~~a~~~g~~v~~~~~V~~l~~~~~g~ 278 (612)
.....+. ......... .+.. .....|+..+++.|++|+++++|++|+.++++
T Consensus 156 ~~~~~~~~~~~~g~e~~~~~~~~~~~~~r~~~~~~~~~~~g~~~g~~~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g- 234 (510)
T 4at0_A 156 WEPPFDDGLMYSGGENAAPFNEIAAPAPRGHVPQMDGKRTGEKGGGYMLMKPLVETAEKLGVRAEYDMRVQTLVTDDTG- 234 (510)
T ss_dssp SSCSSSCSEECCSSTTSTTGGGTSCCCCCEECCCCSSCBTTTBCTTHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTC-
T ss_pred cccCCcccccccCcccccccccccCcccceeeecccccccccCCCHHHHHHHHHHHHHHcCCEEEecCEeEEEEECCCC-
Confidence 0000000 000000000 1111 11222555566679999999999999998544
Q ss_pred CCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcC-ChHHHHHc
Q 007210 279 RPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIG-TPQMLKLS 323 (612)
Q Consensus 279 ~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~-sp~lLl~S 323 (612)
+|+||++.+ +++..++. ++|.||||||+|+ ++++|..-
T Consensus 235 --~v~GV~~~~-~g~~~~i~----A~k~VVlAtGG~~~n~~m~~~~ 273 (510)
T 4at0_A 235 --RVVGIVAKQ-YGKEVAVR----ARRGVVLATGSFAYNDKMIEAH 273 (510)
T ss_dssp --CEEEEEEEE-TTEEEEEE----EEEEEEECCCCCTTCHHHHHHH
T ss_pred --cEEEEEEEE-CCcEEEEE----eCCeEEEeCCChhhCHHHHHHh
Confidence 999999985 56555664 3379999999999 67666543
No 13
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.56 E-value=2.2e-14 Score=157.87 Aligned_cols=190 Identities=18% Similarity=0.196 Sum_probs=106.9
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCCCCcchhHHHHHHHhcCCCCCCccccccCCCceeeccccee
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDGVLNARARVL 156 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 156 (612)
+.++||||||+|++|+++|+.|++ |.+|+||||++..
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~------------------------------------------ 161 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVI------------------------------------------ 161 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS------------------------------------------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC------------------------------------------
Confidence 457999999999999999999999 9999999999733
Q ss_pred cccccccceeeecCChhhhcCCCCChhhhcccchhhhhccccCCCCc------hhHHHHHHHHHHcCCCCCCCCcccCCC
Q 007210 157 GGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQE------GWQKALRDSLLDVGVSPFNGFTYDHIY 230 (612)
Q Consensus 157 GG~s~~~~~~~~r~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~ 230 (612)
||.+.+.++.+...........+.. +..+.++....+......... .......+++.+.|++. .. .....
T Consensus 162 gg~s~~a~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~-~~--~~~~~ 237 (571)
T 1y0p_A 162 GGNAKLAAGGMNAAWTDQQKAKKIT-DSPELMFEDTMKGGQNINDPALVKVLSSHSKDSVDWMTAMGADL-TD--VGMMG 237 (571)
T ss_dssp CTTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCC-CE--EECCT
T ss_pred CCchhhcCceEEeCCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCCC-cc--CcccC
Confidence 4444444333322222222111211 112222322211111111100 01123446677777642 10 00111
Q ss_pred ceecceeEECCCCcee--cH-HHhhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceE
Q 007210 231 GTKIGGTIFDRFGRRH--TA-AELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEV 307 (612)
Q Consensus 231 g~~~~~~~~~~~g~r~--~~-~~~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~V 307 (612)
+..........++... .. ..|...+++.|++|+++++|++|+.++++ +|+||++.+.+|+..++. ++.|
T Consensus 238 g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g---~v~Gv~~~~~~g~~~~i~-----a~~V 309 (571)
T 1y0p_A 238 GASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDKG---TVKGILVKGMYKGYYWVK-----ADAV 309 (571)
T ss_dssp TCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECTTS---CEEEEEEEETTTEEEEEE-----CSEE
T ss_pred CcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCCC---eEEEEEEEeCCCcEEEEE-----CCeE
Confidence 2111112222221111 11 12445566679999999999999987633 899999986567655564 5789
Q ss_pred EecCCCcC-ChHHHH
Q 007210 308 ILSCGAIG-TPQMLK 321 (612)
Q Consensus 308 ILaaG~~~-sp~lLl 321 (612)
|||+|++. ++.++.
T Consensus 310 VlAtGg~~~n~~~~~ 324 (571)
T 1y0p_A 310 ILATGGFAKNNERVA 324 (571)
T ss_dssp EECCCCCTTCHHHHH
T ss_pred EEeCCCcccCHHHHH
Confidence 99999998 455554
No 14
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.55 E-value=1.9e-14 Score=158.12 Aligned_cols=191 Identities=19% Similarity=0.219 Sum_probs=109.5
Q ss_pred CCCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCCCCcchhHHHHHHHhcCCCCCCccccccCCCceeecccce
Q 007210 77 HHSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDGVLNARARV 155 (612)
Q Consensus 77 ~~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 155 (612)
++.+|||||||+|++|+++|+.|++ |.+|+||||++.
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~------------------------------------------ 155 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPF------------------------------------------ 155 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS------------------------------------------
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCC------------------------------------------
Confidence 4578999999999999999999999 999999999973
Q ss_pred ecccccccceeeecCChhhhcCCCCChhhhcccchhhhhccccCCCCc------hhHHHHHHHHHHcCCCCCCCCcccCC
Q 007210 156 LGGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQE------GWQKALRDSLLDVGVSPFNGFTYDHI 229 (612)
Q Consensus 156 lGG~s~~~~~~~~r~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~ 229 (612)
+||.|...++.+.......+...+.. +..+.++....+......... .......+++.+.|++ +.. ....
T Consensus 156 ~gg~s~~s~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~Gv~-~~~--~~~~ 231 (566)
T 1qo8_A 156 SGGNSMISAGGMNAVGTKQQTAHGVE-DKVEWFIEDAMKGGRQQNDIKLVTILAEQSADGVQWLESLGAN-LDD--LKRS 231 (566)
T ss_dssp SCTTGGGCCSCEECSSCHHHHHTTCC-CCHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCC-CCE--EECC
T ss_pred CCCcccccCceeEccCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHhccHHHHHHHHhcCCc-ccc--cccc
Confidence 34444444443332222222211111 122223333222111111100 0122344667777764 210 0011
Q ss_pred CceecceeEECCCCc--eecH-HHhhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCce
Q 007210 230 YGTKIGGTIFDRFGR--RHTA-AELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSE 306 (612)
Q Consensus 230 ~g~~~~~~~~~~~g~--r~~~-~~~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~ 306 (612)
.+..........++. .... ..|...+++.|++|+++++|++|+.++++ +|+||++.+.+|+..++. +|.
T Consensus 232 ~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g---~v~Gv~~~~~~g~~~~i~-----A~~ 303 (566)
T 1qo8_A 232 GGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDDH---SVVGAVVHGKHTGYYMIG-----AKS 303 (566)
T ss_dssp TTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECTTS---BEEEEEEEETTTEEEEEE-----EEE
T ss_pred CCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECCCC---cEEEEEEEeCCCcEEEEE-----cCE
Confidence 111111111112211 0111 12445566679999999999999988633 999999987677665564 499
Q ss_pred EEecCCCcCC-hHHHH
Q 007210 307 VILSCGAIGT-PQMLK 321 (612)
Q Consensus 307 VILaaG~~~s-p~lLl 321 (612)
||||+|++.. +++|.
T Consensus 304 VVlAtGg~s~~~~~~~ 319 (566)
T 1qo8_A 304 VVLATGGYGMNKEMIA 319 (566)
T ss_dssp EEECCCCCTTCHHHHH
T ss_pred EEEecCCcccCHHHHH
Confidence 9999999994 55543
No 15
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.48 E-value=3.4e-13 Score=148.18 Aligned_cols=192 Identities=19% Similarity=0.253 Sum_probs=105.3
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCCCCcchhHHHHHHHhcCCCCCCccccccCCCceeeccccee
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFSDVNVSFLQNFHMTLADTSPQSASQYFISTDGVLNARARVL 156 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l 156 (612)
+.++||||||+|++|+.+|..|++ |.+|+||||.+..
T Consensus 124 ~~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~------------------------------------------ 161 (572)
T 1d4d_A 124 KETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIP------------------------------------------ 161 (572)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSS------------------------------------------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC------------------------------------------
Confidence 457899999999999999999999 9999999999743
Q ss_pred cccccccceeeecCChhhhcCCCCChhhhcccchhhhhccccCCCCc------hhHHHHHHHHHHcCCCCCCCCcccCCC
Q 007210 157 GGGSSINAGFYTRASSQFIERMGWDAKLVNESFPWVERQIVHQPKQE------GWQKALRDSLLDVGVSPFNGFTYDHIY 230 (612)
Q Consensus 157 GG~s~~~~~~~~r~~~~~~~~~gw~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~ 230 (612)
||.+.+.++.+......+....+.. +..+.++.+..+......... .......+++.+.|++ +.. .....
T Consensus 162 ~~~~~~a~gg~~~~~~~~~~~~g~~-ds~~~~~~~~~~~g~~~~~~~~v~~~~~~~~~~i~~l~~~Gv~-~~~--~~~~g 237 (572)
T 1d4d_A 162 GGNTKLAAGGMNAAETKPQAKLGIE-DKKQIMIDDTMKGGRNINDPELVKVLANNSSDSIDWLTSMGAD-MTD--VGRMG 237 (572)
T ss_dssp CTTGGGCCSCEECCSSSTTGGGTCC-CCTHHHHHHHHHHTTTCSCHHHHHHHHHTHHHHHHHHHHHTCC-CCE--EECCT
T ss_pred CcchhhhCCeeEccCCHHHHHhCCC-CCHHHHHHHHHHhcCCCCCHHHHHHHHHccHHHHHHHHhcCCc-ccc--ccccC
Confidence 3333333322222211111111110 111222222211111110000 0112334666666764 211 01111
Q ss_pred ceecceeEECCCCc--eecH-HHhhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceE
Q 007210 231 GTKIGGTIFDRFGR--RHTA-AELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEV 307 (612)
Q Consensus 231 g~~~~~~~~~~~g~--r~~~-~~~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~V 307 (612)
+..........++. .... ..|...+++.|++|+++++|++|+.++++ +|+||++.+.+|+..++. +|.|
T Consensus 238 g~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g---~v~GV~~~~~~G~~~~i~-----A~~V 309 (572)
T 1d4d_A 238 GASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASG---KVTGVLVKGEYTGYYVIK-----ADAV 309 (572)
T ss_dssp TCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--C---CEEEEEEEETTTEEEEEE-----CSEE
T ss_pred CCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCC---eEEEEEEEeCCCcEEEEE-----cCEE
Confidence 21111111122211 1111 12445566679999999999999987623 899999986677665564 5999
Q ss_pred EecCCCcC-ChHHHHHc
Q 007210 308 ILSCGAIG-TPQMLKLS 323 (612)
Q Consensus 308 ILaaG~~~-sp~lLl~S 323 (612)
|||+|++. +++++..-
T Consensus 310 VlAtGg~~~~~~~~~~~ 326 (572)
T 1d4d_A 310 VIAAGGFAKNNERVSKY 326 (572)
T ss_dssp EECCCCCTTCHHHHHHH
T ss_pred EEeCCCCccCHHHHHHh
Confidence 99999998 56665443
No 16
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.40 E-value=1.2e-12 Score=144.03 Aligned_cols=57 Identities=16% Similarity=0.288 Sum_probs=47.0
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGT 316 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~s 316 (612)
++..+.+.|++|++++.|++|+.+++ +|+||.+.+ .+|+.+.+. +|.||||||+++.
T Consensus 161 L~~~~~~~gv~i~~~~~v~~Li~~~g----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 218 (621)
T 2h88_A 161 LYGRSLRYDTSYFVEYFALDLLMENG----ECRGVIALCIEDGTIHRFR-----AKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHTTSCCEEEETEEEEEEEEETT----EEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEEceEEEEEEEECC----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCcccc
Confidence 45566778999999999999998764 999999986 467766664 5899999999875
No 17
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.40 E-value=1.5e-12 Score=144.26 Aligned_cols=57 Identities=12% Similarity=0.264 Sum_probs=45.8
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGT 316 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~s 316 (612)
++..+.+.|++|++++.|++|+.+++ +|+||.+.+ .+|+.+.+. +|.||||||+++.
T Consensus 164 L~~~a~~~gv~i~~~~~v~~L~~~~g----~v~Gv~~~~~~~G~~~~i~-----A~~VVlATGG~~~ 221 (660)
T 2bs2_A 164 VANECLKLGVSIQDRKEAIALIHQDG----KCYGAVVRDLVTGDIIAYV-----AKGTLIATGGYGR 221 (660)
T ss_dssp HHHHHHHHTCEEECSEEEEEEEEETT----EEEEEEEEETTTCCEEEEE-----CSEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEECcEEEEEEecCC----EEEEEEEEECCCCcEEEEE-----cCEEEEccCcchh
Confidence 44455567999999999999998754 999999876 467666664 5899999999974
No 18
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.37 E-value=1.9e-12 Score=142.25 Aligned_cols=58 Identities=19% Similarity=0.202 Sum_probs=45.8
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGT 316 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~s 316 (612)
+...+.+.|++|+++++|++|+.++++ +|+||.+.+ .+|+...+. +|.||||+|+++.
T Consensus 149 L~~~~~~~gv~i~~~~~v~~L~~~~~g---~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 149 LYQQNLKNHTTIFSEWYALDLVKNQDG---AVVGCTALCIETGEVVYFK-----ARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHTTCEEEETEEEEEEEECTTS---CEEEEEEEETTTCCEEEEE-----EEEEEECCCCCGG
T ss_pred HHHHHHhCCCEEEeCcEEEEEEECCCC---EEEEEEEEEcCCCeEEEEE-----cCEEEECCCCCcc
Confidence 445555679999999999999986333 899999986 467665664 5899999999874
No 19
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.32 E-value=3.8e-12 Score=138.53 Aligned_cols=61 Identities=18% Similarity=0.262 Sum_probs=44.2
Q ss_pred hhhhcCC-CCcEEEeccEEEEEEecCCCC---CCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCC
Q 007210 251 LLASANP-QKITVLIRATVQKIVFDTSGK---RPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGT 316 (612)
Q Consensus 251 ~l~~a~~-~g~~v~~~~~V~~l~~~~~g~---~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~s 316 (612)
|+..+.+ .|++|++++.|++|+.++++. ..+|+||.+.+ .+|+...+. +|.||||+|+++.
T Consensus 144 L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~~~ 209 (540)
T 1chu_A 144 LVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCH-----AKAVVLATGGASK 209 (540)
T ss_dssp CHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEE-----CSEEEECCCCCGG
T ss_pred HHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEE-----cCeEEECCCCccc
Confidence 3444544 799999999999999843210 01799999986 356655553 5899999999874
No 20
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.28 E-value=1.9e-11 Score=134.69 Aligned_cols=58 Identities=19% Similarity=0.255 Sum_probs=45.7
Q ss_pred hhhhcCCCC-cEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCCh
Q 007210 251 LLASANPQK-ITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGTP 317 (612)
Q Consensus 251 ~l~~a~~~g-~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~sp 317 (612)
|+..+.+.+ ++|++++.|++|+.+++ +|+||.+.+ .+|+...+. ++.||||+|+++..
T Consensus 140 L~~~~~~~gnv~i~~~~~v~~l~~~~g----~v~Gv~~~~~~~G~~~~i~-----A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSLQFPQIQRFDEHFVLDILVDDG----HVRGLVAMNMMEGTLVQIR-----ANAVVMATGGAGRV 199 (602)
T ss_dssp HHHHHTTCTTEEEEETEEEEEEEEETT----EEEEEEEEETTTTEEEEEE-----CSCEEECCCCCGGG
T ss_pred HHHHHHhCCCcEEEeCCEEEEEEEeCC----EEEEEEEEEcCCCcEEEEE-----cCeEEECCCCCccc
Confidence 445556566 99999999999998764 999998875 467655554 58999999998754
No 21
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.23 E-value=1.5e-11 Score=136.30 Aligned_cols=60 Identities=13% Similarity=0.265 Sum_probs=45.4
Q ss_pred hhhhcCCC--CcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCC
Q 007210 251 LLASANPQ--KITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGT 316 (612)
Q Consensus 251 ~l~~a~~~--g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~s 316 (612)
+...+++. |++|+.++.|++|+.++++ ..+|+||.+.+ .+|+...+. +|.||||||+++.
T Consensus 172 L~~~a~~~~~gV~i~~~~~v~dLi~~~~~-~g~v~Gv~~~~~~~g~~~~i~-----Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 172 VAEAAKNALGQDRIIERIFIVKLLLDKNT-PNRIAGAVGFNLRANEVHIFK-----ANAMVVACGGAVN 234 (662)
T ss_dssp HHHHHHHHHCTTTEECSEEECCCEECSSS-TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred HHHHHHhcCCCcEEEEceEEEEEEEeCCc-cceEEEEEEEEcCCCcEEEEE-----eCEEEECCCcccc
Confidence 33444444 9999999999999998651 01999999876 456666664 5899999999884
No 22
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=99.21 E-value=2.5e-11 Score=134.93 Aligned_cols=60 Identities=13% Similarity=0.092 Sum_probs=44.7
Q ss_pred hhhhcCCC-Cc-EEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCC
Q 007210 251 LLASANPQ-KI-TVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGT 316 (612)
Q Consensus 251 ~l~~a~~~-g~-~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~s 316 (612)
+...+++. |+ +|++++.|++|+.++++ ..+|+||.+.+ .+|+...+. +|.||||+|+++.
T Consensus 157 l~~~~~~~~gv~~i~~~~~v~~L~~~~~~-~g~v~Gv~~~~~~~g~~~~i~-----A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 157 IAEAAKMAVGEENIYERVFIFELLKDNND-PNAVAGAVGFSVREPKFYVFK-----AKAVILATGGATL 219 (643)
T ss_dssp HHHHHHHHHCGGGEECSEEEEEEEECTTC-TTBEEEEEEEESSSSCEEEEE-----CSEEEECCCCBCS
T ss_pred HHHHHHhcCCCcEEEecCEEEEEEEcCCc-cceeEEEEEEEecCCcEEEEE-----cCEEEECCCcccc
Confidence 33344455 99 99999999999987541 11899999865 456655554 5999999999985
No 23
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.16 E-value=7.7e-11 Score=125.59 Aligned_cols=55 Identities=20% Similarity=0.400 Sum_probs=43.1
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChH
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQ 318 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~ 318 (612)
+...+++.|++|+++++|++|..+++ ++++|++. +|+ .+. ++.||+|+|++..|.
T Consensus 140 L~~~~~~~GV~i~~~~~V~~i~~~~~----~v~~V~~~--~G~--~i~-----Ad~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 140 LLTRLKDLGVKIRTNTPVETIEYENG----QTKAVILQ--TGE--VLE-----TNHVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT----EEEEEEET--TCC--EEE-----CSCEEECCCCSSSGG
T ss_pred HHHHHHHCCCEEEeCcEEEEEEecCC----cEEEEEEC--CCC--EEE-----CCEEEECCCCCcCCC
Confidence 44556668999999999999998764 88888874 564 243 589999999998764
No 24
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.15 E-value=1.2e-10 Score=127.47 Aligned_cols=66 Identities=20% Similarity=0.348 Sum_probs=51.3
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeC-CCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDE-NGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVG 326 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~-~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG 326 (612)
+...+.+.|++|+++++|++|..+++ +++||++.+. .|+...+. ++.||+|+|.+ +..|+...|+.
T Consensus 176 L~~~a~~~G~~i~~~~~V~~l~~~~g----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~~-s~~l~~~~g~~ 242 (561)
T 3da1_A 176 IMKEAVARGAVALNYMKVESFIYDQG----KVVGVVAKDRLTDTTHTIY-----AKKVVNAAGPW-VDTLREKDRSK 242 (561)
T ss_dssp HHHHHHHTTCEEEESEEEEEEEEETT----EEEEEEEEETTTCCEEEEE-----EEEEEECCGGG-HHHHHHTTTCC
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCC----eEEEEEEEEcCCCceEEEE-----CCEEEECCCcc-hHHHHHhcCCC
Confidence 44456678999999999999999865 8999999863 45556664 58999999975 77777766654
No 25
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.13 E-value=6.4e-11 Score=122.58 Aligned_cols=63 Identities=10% Similarity=0.109 Sum_probs=45.5
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHc-CC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLS-GV 325 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~S-GI 325 (612)
+...+++.|++|+++++|++|..+++ .++.|.. .+|+..++. ++.||+|+|++ +++|+... |+
T Consensus 156 l~~~~~~~Gv~i~~~~~v~~i~~~~~----~~~~v~~--~~g~~~~~~-----a~~VV~A~G~~-s~~l~~~~~g~ 219 (369)
T 3dme_A 156 YQGDAESDGAQLVFHTPLIAGRVRPE----GGFELDF--GGAEPMTLS-----CRVLINAAGLH-APGLARRIEGI 219 (369)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEECTT----SSEEEEE--CTTSCEEEE-----EEEEEECCGGG-HHHHHHTEETS
T ss_pred HHHHHHHCCCEEECCCEEEEEEEcCC----ceEEEEE--CCCceeEEE-----eCEEEECCCcc-hHHHHHHhcCC
Confidence 44556678999999999999998765 3233544 366545554 58999999986 77777666 55
No 26
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.06 E-value=5.2e-10 Score=122.60 Aligned_cols=65 Identities=14% Similarity=0.146 Sum_probs=49.8
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeC-CCCeEEEEeecCCCceEEecCCCcCChHHHHHcCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDE-NGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGV 325 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~-~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGI 325 (612)
++..+.+.|++|+++++|++|+.+++ +|+||++.+. .|+...+. ++.||+|||++ +..++...|+
T Consensus 194 l~~~a~~~Ga~i~~~t~V~~l~~~~~----~v~gV~~~d~~tg~~~~i~-----A~~VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 194 NIKKAAEDGAYLVSKMKAVGFLYEGD----QIVGVKARDLLTDEVIEIK-----AKLVINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT----EEEEEEEEETTTCCEEEEE-----BSCEEECCGGG-HHHHHTTCCS
T ss_pred HHHHHHHcCCeEEeccEEEEEEEeCC----EEEEEEEEEcCCCCEEEEE-----cCEEEECCChh-HHHHHHhhcc
Confidence 34456678999999999999998865 8999999864 45544554 59999999986 7777655543
No 27
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.04 E-value=2.7e-10 Score=118.52 Aligned_cols=36 Identities=36% Similarity=0.486 Sum_probs=33.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhccCeeeEeecCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGV 113 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Laeg~~VlvLEkG~~ 113 (612)
+.++||||||+|.+|+++|++|++|.+|+||||++.
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La~G~~V~vlE~~~~ 42 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLSAHGRVVVLEREAQ 42 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHTTTSCEEEECSSSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHhCCCCEEEEECCCC
Confidence 567999999999999999999999999999999863
No 28
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.04 E-value=3.7e-10 Score=118.74 Aligned_cols=37 Identities=24% Similarity=0.447 Sum_probs=32.2
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
..+|||||||+|++|+++|+.|++ |.+|+||||++..
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 457999999999999999999999 9999999999743
No 29
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.03 E-value=4.8e-10 Score=120.08 Aligned_cols=52 Identities=19% Similarity=0.284 Sum_probs=39.9
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIG 315 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~ 315 (612)
+...+++.|++|+++++| +|+.+++ +++||.+.+.+| .+ .++.||||+|++.
T Consensus 125 L~~~~~~~gv~i~~~~~v-~l~~~~~----~v~Gv~v~~~~g---~~-----~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 125 LLKLAREEGIPIIEDRLV-EIRVKDG----KVTGFVTEKRGL---VE-----DVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHTTCCEECCCEE-EEEEETT----EEEEEEETTTEE---EC-----CCSEEEECCCCCG
T ss_pred HHHHHHhCCCEEEECcEE-EEEEeCC----EEEEEEEEeCCC---eE-----EeeeEEECCCCCc
Confidence 444555679999999999 9988765 899998864333 22 3699999999875
No 30
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.00 E-value=5.9e-10 Score=116.09 Aligned_cols=59 Identities=15% Similarity=0.177 Sum_probs=43.6
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSG 324 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SG 324 (612)
+...+++.|++|+++++|++|..+++ +++||+. .+| .+. ++.||+|+|++ ++.|+...|
T Consensus 155 l~~~~~~~Gv~i~~~~~v~~i~~~~~----~v~gv~~--~~g---~i~-----a~~VV~A~G~~-s~~l~~~~g 213 (382)
T 1y56_B 155 FAVKAKEYGAKLLEYTEVKGFLIENN----EIKGVKT--NKG---IIK-----TGIVVNATNAW-ANLINAMAG 213 (382)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSS----BEEEEEE--TTE---EEE-----CSEEEECCGGG-HHHHHHHHT
T ss_pred HHHHHHHCCCEEECCceEEEEEEECC----EEEEEEE--CCc---EEE-----CCEEEECcchh-HHHHHHHcC
Confidence 44455667999999999999998765 7888875 345 343 58999999986 556665554
No 31
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.97 E-value=6.9e-10 Score=117.92 Aligned_cols=37 Identities=30% Similarity=0.490 Sum_probs=33.9
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cC-eeeEeecCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGGVP 114 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~~~ 114 (612)
+.+|||||||+|.+|+++|++|++ |. +|+||||+...
T Consensus 4 ~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~ 42 (438)
T 3dje_A 4 TKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVP 42 (438)
T ss_dssp CTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCC
Confidence 457999999999999999999999 99 99999998754
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.95 E-value=6.7e-09 Score=108.92 Aligned_cols=35 Identities=37% Similarity=0.592 Sum_probs=32.6
Q ss_pred CCcccEEEECCCCchHHHHHhhhc--c-CeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ--N-FTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae--g-~~VlvLEkG~ 112 (612)
+.++||||||+|.+|+++|++|++ | .+|+||||+.
T Consensus 19 ~~~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 19 KKSYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 457999999999999999999998 8 8999999986
No 33
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.94 E-value=1.1e-09 Score=122.74 Aligned_cols=34 Identities=26% Similarity=0.378 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
..+||||||+|.+|+++|++|++ |.+|+||||..
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45999999999999999999999 99999999975
No 34
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.93 E-value=6.6e-09 Score=108.79 Aligned_cols=35 Identities=37% Similarity=0.635 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
.++||||||+|++|+++|+.|++ |.+|+||||+..
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 46999999999999999999999 999999999863
No 35
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.93 E-value=4.7e-09 Score=113.41 Aligned_cols=60 Identities=13% Similarity=0.044 Sum_probs=45.4
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCChHHHH
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGTPQMLK 321 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl 321 (612)
+...+.+.|++|+++++|++|..++ ++.+|.+.+ .+|+...+. +|.||+|+|.+ +..++.
T Consensus 155 l~~~a~~~Gv~i~~~~~V~~l~~~~-----~~~~V~~~d~~~G~~~~i~-----A~~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 155 NAQMVVRKGGEVLTRTRATSARREN-----GLWIVEAEDIDTGKKYSWQ-----ARGLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHHHHHHTTCEEECSEEEEEEEEET-----TEEEEEEEETTTCCEEEEE-----ESCEEECCGGG-HHHHHH
T ss_pred HHHHHHHcCCEEEcCcEEEEEEEeC-----CEEEEEEEECCCCCEEEEE-----CCEEEECCChh-HHHHHH
Confidence 4445566799999999999998864 578888875 356655564 58999999986 566654
No 36
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.93 E-value=1.3e-09 Score=117.87 Aligned_cols=36 Identities=31% Similarity=0.409 Sum_probs=33.3
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
...+||||||+|++|+++|+.|++ |.+|+||||++.
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE 141 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc
Confidence 456899999999999999999999 999999999964
No 37
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.91 E-value=2.7e-09 Score=111.72 Aligned_cols=35 Identities=29% Similarity=0.438 Sum_probs=32.9
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
.+|||||||+|++|+++|++|++ |.+|+||||++.
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~ 38 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK 38 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 46999999999999999999999 999999999874
No 38
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.90 E-value=5e-09 Score=104.35 Aligned_cols=35 Identities=34% Similarity=0.513 Sum_probs=32.4
Q ss_pred CcccEEEECCCCchHHHHHhhhc--cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~~ 113 (612)
.+|||||||+|++|+.+|..|++ |.+|+||||.+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~ 74 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVS 74 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSS
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCC
Confidence 46899999999999999999998 799999999864
No 39
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.88 E-value=5.7e-09 Score=105.32 Aligned_cols=35 Identities=29% Similarity=0.531 Sum_probs=32.4
Q ss_pred CcccEEEECCCCchHHHHHhhhc---cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~ 113 (612)
.+|||||||+|++|+++|+.|++ |.+|+|||+++.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~ 115 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVA 115 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSS
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 46999999999999999999998 899999999863
No 40
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.88 E-value=7.7e-09 Score=108.08 Aligned_cols=64 Identities=17% Similarity=0.212 Sum_probs=45.2
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVG 326 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG 326 (612)
+...+.+.|++|+.+++|++|..+++ +++||.+.+ .+...++. ++.||.|+|... .+...-|+.
T Consensus 108 L~~~~~~~gv~i~~~~~v~~i~~~~~----~v~gv~~~~-~~~~~~~~-----a~~vV~A~G~~s--~~~~~~g~~ 171 (397)
T 3cgv_A 108 LAALAAKAGADVWVKSPALGVIKENG----KVAGAKIRH-NNEIVDVR-----AKMVIAADGFES--EFGRWAGLK 171 (397)
T ss_dssp HHHHHHHHTCEEESSCCEEEEEEETT----EEEEEEEEE-TTEEEEEE-----EEEEEECCCTTC--HHHHHHTCC
T ss_pred HHHHHHhCCCEEEECCEEEEEEEeCC----EEEEEEEEE-CCeEEEEE-----cCEEEECCCcch--HhHHhcCCC
Confidence 33445567999999999999998865 899999875 33344553 589999999754 333333443
No 41
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.88 E-value=3.4e-09 Score=119.00 Aligned_cols=35 Identities=23% Similarity=0.289 Sum_probs=32.8
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+.++||||||+|.+|+++|++|++ |.+|+||||+.
T Consensus 262 ~~~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 297 (689)
T 3pvc_A 262 TRCDDIAIIGGGIVSALTALALQRRGAVVTLYCADA 297 (689)
T ss_dssp SCCSSEEEECCSHHHHHHHHHHHTTTCCEEEEESSS
T ss_pred CCCCCEEEECCcHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 457999999999999999999999 99999999985
No 42
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.85 E-value=2.7e-09 Score=111.05 Aligned_cols=35 Identities=31% Similarity=0.597 Sum_probs=33.2
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+.+|||||||+|++|+++|++|++ |.+|+||||+.
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 567999999999999999999999 99999999985
No 43
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.85 E-value=8.3e-09 Score=107.53 Aligned_cols=36 Identities=28% Similarity=0.535 Sum_probs=33.3
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
++|||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 46999999999999999999999 9999999998643
No 44
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.83 E-value=1.1e-08 Score=110.75 Aligned_cols=57 Identities=23% Similarity=0.380 Sum_probs=45.7
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGT 316 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~s 316 (612)
+...+.+.|++|+++++|++|..+++ +++||.+.+.+|+..++. ++.||.|+|....
T Consensus 117 L~~~a~~~Gv~i~~~~~V~~v~~~~~----~v~gv~~~~~dG~~~~i~-----ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 117 LLRNSERKGVDVRERHEVIDVLFEGE----RAVGVRYRNTEGVELMAH-----ARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEEETT----EEEEEEEECSSSCEEEEE-----EEEEEECCCTTCS
T ss_pred HHHHHHhCCCEEEcCCEEEEEEEECC----EEEEEEEEeCCCCEEEEE-----cCEEEECCCcchH
Confidence 33445568999999999999998765 899999987778755664 5899999998653
No 45
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.83 E-value=1.3e-09 Score=117.88 Aligned_cols=60 Identities=15% Similarity=0.119 Sum_probs=41.0
Q ss_pred HhhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHH
Q 007210 250 ELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKL 322 (612)
Q Consensus 250 ~~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~ 322 (612)
.+...+++.|++|+++++|++|+.+++ +++||+.. +|+++ .++.||+++....+.+.|+-
T Consensus 226 aL~~~~~~~Gg~I~~~~~V~~I~~~~~----~~~gV~~~--~g~~~-------~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 226 GMIKLFQDLGGEVVLNARVSHMETTGN----KIEAVHLE--DGRRF-------LTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEETT----EEEEEEET--TSCEE-------ECSCEEECCC----------
T ss_pred HHHHHHHHhCCceeeecceeEEEeeCC----eEEEEEec--CCcEE-------EcCEEEECCCHHHHHHHhcc
Confidence 355556778999999999999999876 99999885 67653 35899999998888776663
No 46
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.82 E-value=8.4e-09 Score=118.40 Aligned_cols=60 Identities=18% Similarity=0.183 Sum_probs=44.9
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGV 325 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGI 325 (612)
+...+.+.|++|+++++|++|..+++ ++++|... +| ++. ++.||+|+|++ ++.++...|+
T Consensus 157 L~~~a~~~Gv~i~~~t~V~~i~~~~~----~v~~V~t~--~G---~i~-----Ad~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 157 LIKRTESAGVTYRGSTTVTGIEQSGG----RVTGVQTA--DG---VIP-----ADIVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT----EEEEEEET--TE---EEE-----CSEEEECCGGG-HHHHHHTTTC
T ss_pred HHHHHHHcCCEEECCceEEEEEEeCC----EEEEEEEC--Cc---EEE-----CCEEEECCccc-hHHHHHHhCC
Confidence 44556668999999999999998765 78888753 45 343 68999999986 5677665554
No 47
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.81 E-value=1.8e-08 Score=107.50 Aligned_cols=57 Identities=14% Similarity=0.257 Sum_probs=44.6
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeC-CCCeEEEEeecCCCceEEecCCCcCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDE-NGNQHQAFLAGNPKSEVILSCGAIGT 316 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~-~g~~~~v~~~~~a~k~VILaaG~~~s 316 (612)
+...+.+.|++|+++++|++|..+++ +++||.+.+. +|+..++. ++.||.|+|....
T Consensus 106 L~~~a~~~gv~i~~~~~v~~i~~~~~----~v~gv~~~~~~~G~~~~~~-----ad~VV~AdG~~s~ 163 (453)
T 3atr_A 106 VLKEAQDRGVEIWDLTTAMKPIFEDG----YVKGAVLFNRRTNEELTVY-----SKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHTTCEEESSEEEEEEEEETT----EEEEEEEEETTTTEEEEEE-----CSEEEECCGGGCT
T ss_pred HHHHHHHcCCEEEeCcEEEEEEEECC----EEEEEEEEEcCCCceEEEE-----cCEEEECcCCchh
Confidence 34445557999999999999998765 8999998765 67655553 6999999998654
No 48
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.80 E-value=9.8e-09 Score=109.32 Aligned_cols=34 Identities=38% Similarity=0.625 Sum_probs=31.8
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-c-CeeeEeecC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-N-FTVLLLERG 111 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG 111 (612)
+.+|||||||+|.+|+++|++|++ | .+|+||||.
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 367999999999999999999999 9 999999993
No 49
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.78 E-value=1.9e-08 Score=106.48 Aligned_cols=42 Identities=26% Similarity=0.453 Sum_probs=37.8
Q ss_pred CCCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCCCC
Q 007210 77 HHSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFSDV 118 (612)
Q Consensus 77 ~~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~~~ 118 (612)
++.+|||||||+|.+|+++|.+|++ |.+|+||||++..++..
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~ 59 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGET 59 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCc
Confidence 3678999999999999999999999 99999999998776543
No 50
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.77 E-value=9.8e-09 Score=108.44 Aligned_cols=57 Identities=21% Similarity=0.232 Sum_probs=44.4
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHH
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLK 321 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl 321 (612)
+...+.+.|++|+++++|++|..+++ +++||.+ +|+ ++ .++.||+|++...+.+||-
T Consensus 202 l~~~~~~~G~~i~~~~~V~~i~~~~~----~~~gv~~---~g~--~~-----~ad~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 202 LETVISANGGKIHTGQEVSKILIENG----KAAGIIA---DDR--IH-----DADLVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEEETT----EEEEEEE---TTE--EE-----ECSEEEECSCHHHHHHHTT
T ss_pred HHHHHHHcCCEEEECCceeEEEEECC----EEEEEEE---CCE--EE-----ECCEEEECCCHHHHHHhcC
Confidence 44556678999999999999998865 8999876 353 23 3589999999988877654
No 51
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.72 E-value=6.2e-08 Score=100.87 Aligned_cols=34 Identities=32% Similarity=0.495 Sum_probs=32.1
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
+|||||||+|.+|+++|++|++ |.+|+||||+..
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~ 37 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDP 37 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 5899999999999999999999 999999999863
No 52
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.72 E-value=8.3e-09 Score=112.04 Aligned_cols=34 Identities=26% Similarity=0.473 Sum_probs=32.1
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.+|||||||+|.||+.||..|++ |.+|+|||++.
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~ 60 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNA 60 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecc
Confidence 46999999999999999999999 99999999984
No 53
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.71 E-value=9.1e-09 Score=112.16 Aligned_cols=34 Identities=35% Similarity=0.567 Sum_probs=32.2
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.+|||||||+|.||+.||..|++ |.+|+|||++.
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 61 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNI 61 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecc
Confidence 57999999999999999999999 99999999974
No 54
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.68 E-value=3.4e-08 Score=104.11 Aligned_cols=35 Identities=29% Similarity=0.536 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
.+|||||||+|++|+++|+.|++ |.+|+||||...
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~ 39 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKF 39 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 46999999999999999999999 999999999863
No 55
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.67 E-value=3.1e-08 Score=108.77 Aligned_cols=58 Identities=19% Similarity=0.305 Sum_probs=43.9
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEe----CCCCe-------EEEEeecCCCceEEecCCCcCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKD----ENGNQ-------HQAFLAGNPKSEVILSCGAIGT 316 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~----~~g~~-------~~v~~~~~a~k~VILaaG~~~s 316 (612)
+...+++.|++|++++.|++|+.++++ +|+||.+.+ .+|+. .++ .++.||+|.|+...
T Consensus 150 L~~~a~~~Gv~i~~g~~v~~l~~~~~g---~V~gV~~~~~g~~~~G~~~~~~~~g~~i-----~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 150 MGEQAEALGVEVYPGYAAAEILFHEDG---SVKGIATNDVGIQKDGAPKTTFERGLEL-----HAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHTTCEEETTCCEEEEEECTTS---SEEEEEECCEEECTTSCEEEEEECCCEE-----ECSEEEECCCTTCH
T ss_pred HHHHHHHcCCEEEcCCEEEEEEEcCCC---CEEEEEeCCccccCCCCcccccCCceEE-----ECCEEEEeeCCCch
Confidence 444555679999999999999988654 899998863 35542 344 36999999999874
No 56
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.67 E-value=5.7e-08 Score=100.55 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=32.1
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
+|||||||+|.+|+++|++|++ |.+|+||||+..
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~ 36 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMP 36 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 4899999999999999999999 999999999864
No 57
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.65 E-value=7.7e-08 Score=96.48 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=32.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhc---cCeeeEeecCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGV 113 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~ 113 (612)
..+|||+|||+|++|+.+|..|++ |.+|+|+|+.+.
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~ 101 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA 101 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc
Confidence 456899999999999999999997 689999999863
No 58
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.64 E-value=3.8e-08 Score=107.89 Aligned_cols=36 Identities=28% Similarity=0.457 Sum_probs=33.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
+.++||||||+|++|+++|+.|++ |.+|+|||+.+.
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~ 57 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAF 57 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCC
Confidence 457999999999999999999999 999999999864
No 59
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.58 E-value=1e-07 Score=97.46 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHHHhhhc----cCeeeEeecCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ----NFTVLLLERGGV 113 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae----g~~VlvLEkG~~ 113 (612)
+||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 599999999999999999987 689999999863
No 60
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.58 E-value=4.5e-08 Score=103.29 Aligned_cols=35 Identities=26% Similarity=0.406 Sum_probs=32.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
||||||+|.+|+++|++|++ |.+|+||||.+..++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG 37 (421)
T 3nrn_A 2 RAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGG 37 (421)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 89999999999999999999 999999999876544
No 61
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.57 E-value=7.3e-08 Score=92.83 Aligned_cols=33 Identities=33% Similarity=0.441 Sum_probs=31.5
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+|||||||+|++|+.+|..|++ |.+|+|||+..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 5999999999999999999999 99999999984
No 62
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.52 E-value=4.7e-08 Score=105.27 Aligned_cols=36 Identities=28% Similarity=0.358 Sum_probs=33.2
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
...+||||||+|++|+.+|..|++ |.+|+||||.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc
Confidence 456899999999999999999999 999999999863
No 63
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.52 E-value=9.4e-08 Score=97.97 Aligned_cols=34 Identities=24% Similarity=0.522 Sum_probs=32.1
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
.|||||||+|++|+.+|..|++ |.+|+|||+.+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~ 37 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEAS 37 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 5899999999999999999999 999999999863
No 64
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.52 E-value=3.4e-07 Score=92.52 Aligned_cols=65 Identities=31% Similarity=0.446 Sum_probs=48.3
Q ss_pred hhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCC
Q 007210 252 LASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGV 325 (612)
Q Consensus 252 l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGI 325 (612)
...+.+.|++|+++++|++|..+++ ++.+|.+.+ .+|+...+ .++.||+|+|...++.+|..+|+
T Consensus 197 ~~~l~~~gv~i~~~~~v~~i~~~~~----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 197 VQEIKKRNIPYIMNAQVTEIVGDGK----KVTGVKYKDRTTGEEKLI-----ETDGVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HHHHHHTTCCEECSEEEEEEEESSS----SEEEEEEEETTTCCEEEE-----CCSEEEECCCEEECCGGGTTSCC
T ss_pred HHHHhcCCcEEEcCCeEEEEecCCc----eEEEEEEEEcCCCceEEE-----ecCEEEEeeCCccChHHHhhccc
Confidence 3344567999999999999987643 688999875 25665555 46999999987767777765554
No 65
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.50 E-value=1e-07 Score=103.96 Aligned_cols=35 Identities=34% Similarity=0.620 Sum_probs=32.4
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+.+|||||||+|.+|+.||..|++ |.+|+|||+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 567999999999999999999999 99999999974
No 66
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.49 E-value=3.2e-07 Score=99.88 Aligned_cols=37 Identities=32% Similarity=0.434 Sum_probs=33.8
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
+.++||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 3 ~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~ 40 (535)
T 3ihg_A 3 DHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGL 40 (535)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSC
T ss_pred CccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 357999999999999999999999 9999999998743
No 67
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.49 E-value=6.7e-07 Score=96.29 Aligned_cols=39 Identities=44% Similarity=0.508 Sum_probs=34.5
Q ss_pred CCCCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 76 HHHSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 76 ~~~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
+++.++||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER 46 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 34788999999999999999999999 9999999998643
No 68
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.47 E-value=3.5e-06 Score=84.89 Aligned_cols=60 Identities=15% Similarity=0.256 Sum_probs=46.7
Q ss_pred CCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCC
Q 007210 256 NPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGV 325 (612)
Q Consensus 256 ~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGI 325 (612)
++.|+++++++.|+++..+ + ++.+|++.+ .+|+...+. .+.||+|+|.-.+..+|..+|+
T Consensus 201 ~~~gv~~~~~~~v~~i~~~-~----~~~~v~~~~~~~g~~~~~~-----~D~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 201 KKPNVEFVLNSVVKEIKGD-K----VVKQVVVENLKTGEIKELN-----VNGVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp TCTTEEEECSEEEEEEEES-S----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEECCHHHHHHTTC
T ss_pred hCCCcEEEeCCEEEEEecc-C----ceeEEEEEECCCCceEEEE-----cCEEEEEECCCCChhHHhhcCe
Confidence 4569999999999999865 3 678898886 346655553 5899999998777778877765
No 69
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.43 E-value=3.9e-07 Score=92.68 Aligned_cols=35 Identities=23% Similarity=0.389 Sum_probs=32.2
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
.+||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~ 37 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 3799999999999999999999 9999999998643
No 70
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.40 E-value=1.3e-06 Score=91.67 Aligned_cols=36 Identities=25% Similarity=0.325 Sum_probs=32.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
.+.|||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~ 57 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKE 57 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 567999999999999999999999 999999999863
No 71
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.40 E-value=9.2e-07 Score=95.20 Aligned_cols=37 Identities=38% Similarity=0.429 Sum_probs=33.6
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
+.++||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR 47 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 567999999999999999999999 9999999998643
No 72
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.39 E-value=2.5e-07 Score=97.01 Aligned_cols=36 Identities=44% Similarity=0.773 Sum_probs=32.4
Q ss_pred CcccEEEECCCCchHHHHHhhhc---cCeeeEeecCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGVP 114 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~~ 114 (612)
.+|||||||+|.+|+++|+.|++ |.+|+||||+...
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 46999999999999999999998 7999999998643
No 73
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.39 E-value=1.7e-06 Score=87.78 Aligned_cols=56 Identities=14% Similarity=0.215 Sum_probs=42.4
Q ss_pred CCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeC-CCCeEEEEeecCCCceEEecCCCcCChHHH
Q 007210 256 NPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDE-NGNQHQAFLAGNPKSEVILSCGAIGTPQML 320 (612)
Q Consensus 256 ~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~-~g~~~~v~~~~~a~k~VILaaG~~~sp~lL 320 (612)
+..|++|++++.|++|..+++ ++++|.+.+. +|+..++ ..+.||+|+|.-.++.++
T Consensus 220 ~~~gv~i~~~~~v~~i~~~~~----~~~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~~ 276 (338)
T 3itj_A 220 KNEKIEILYNTVALEAKGDGK----LLNALRIKNTKKNEETDL-----PVSGLFYAIGHTPATKIV 276 (338)
T ss_dssp HCTTEEEECSEEEEEEEESSS----SEEEEEEEETTTTEEEEE-----ECSEEEECSCEEECCGGG
T ss_pred hcCCeEEeecceeEEEEcccC----cEEEEEEEECCCCceEEE-----EeCEEEEEeCCCCChhHh
Confidence 345999999999999987764 7899999863 3444455 358999999976665554
No 74
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.38 E-value=3e-07 Score=99.80 Aligned_cols=36 Identities=22% Similarity=0.421 Sum_probs=32.9
Q ss_pred CcccEEEECCCCchHHHHHhhh-c-cCeeeEeecCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLS-Q-NFTVLLLERGGVP 114 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~La-e-g~~VlvLEkG~~~ 114 (612)
..+||||||+|++|+.+|.+|+ + |.+|+||||.+..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~ 44 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP 44 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC
Confidence 4699999999999999999999 7 9999999998633
No 75
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.38 E-value=3.1e-07 Score=95.79 Aligned_cols=33 Identities=24% Similarity=0.431 Sum_probs=31.5
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+|||||||+|++|+++|+.|++ |.+|+||||.+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4899999999999999999999 99999999986
No 76
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.36 E-value=1.6e-06 Score=92.03 Aligned_cols=36 Identities=31% Similarity=0.473 Sum_probs=32.9
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cC--eeeEeecCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NF--TVLLLERGGVP 114 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG~~~ 114 (612)
..+||+|||+|++|+++|..|++ |. +|+|+|+.+..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~ 43 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSP 43 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCC
Confidence 46899999999999999999999 98 99999998644
No 77
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.33 E-value=7.2e-07 Score=93.25 Aligned_cols=35 Identities=26% Similarity=0.425 Sum_probs=32.6
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
.++||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 46999999999999999999999 999999999863
No 78
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.33 E-value=5.5e-07 Score=98.43 Aligned_cols=37 Identities=38% Similarity=0.503 Sum_probs=31.2
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
..+|||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~ 84 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEP 84 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 356999999999999999999999 9999999998643
No 79
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.33 E-value=3.6e-07 Score=99.45 Aligned_cols=36 Identities=28% Similarity=0.417 Sum_probs=32.9
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
...+||||||+|++|+.+|.+|++ |.+|+||||.+.
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~ 55 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASG 55 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 457999999999999999999999 999999999873
No 80
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.29 E-value=1.2e-06 Score=92.21 Aligned_cols=61 Identities=23% Similarity=0.299 Sum_probs=48.2
Q ss_pred hhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCC
Q 007210 253 ASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVG 326 (612)
Q Consensus 253 ~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG 326 (612)
..+++.|++|++++.|++|..+++ ++++|+.. +|+. + .++.||+|+|..-+..+|..+|+-
T Consensus 202 ~~l~~~GV~i~~~~~v~~i~~~~~----~v~~v~l~--dG~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 202 AEHRAHGVDLRTGAAMDCIEGDGT----KVTGVRMQ--DGSV--I-----PADIVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHTTCEEEETCCEEEEEESSS----BEEEEEES--SSCE--E-----ECSEEEECSCCEESCHHHHHTTCC
T ss_pred HHHHhCCCEEEECCEEEEEEecCC----cEEEEEeC--CCCE--E-----EcCEEEECCCCccChHHHHhCCCC
Confidence 345678999999999999987654 88888875 5653 3 358999999988787888888764
No 81
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.29 E-value=3.7e-06 Score=91.63 Aligned_cols=37 Identities=27% Similarity=0.451 Sum_probs=33.7
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
+.++||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 357999999999999999999999 9999999998743
No 82
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.28 E-value=4.1e-06 Score=87.40 Aligned_cols=35 Identities=29% Similarity=0.319 Sum_probs=32.5
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
..+||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 45899999999999999999999 999999999863
No 83
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.27 E-value=3.1e-07 Score=89.95 Aligned_cols=35 Identities=23% Similarity=0.389 Sum_probs=32.7
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
++||+|||||++|+++|+.|++ |.+|+||||.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 4899999999999999999999 9999999998754
No 84
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.25 E-value=1.4e-06 Score=89.71 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=32.3
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
...+||||||+|++|+.+|..|++ |.+|+|||+.+
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 47 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMP 47 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 457999999999999999999999 99999999986
No 85
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.24 E-value=1.9e-06 Score=93.90 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=33.7
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
..++||||||+|++|+.+|.+|++ |.+|+||||++..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~ 51 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV 51 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 357999999999999999999999 9999999998743
No 86
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.23 E-value=2e-06 Score=87.46 Aligned_cols=34 Identities=15% Similarity=0.235 Sum_probs=32.2
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
..+||||||+|++|+.+|.+|++ |.+|+|+|+.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 38 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLP 38 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 46999999999999999999999 99999999986
No 87
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.23 E-value=1.1e-05 Score=87.44 Aligned_cols=66 Identities=21% Similarity=0.335 Sum_probs=47.2
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChH-HHHHcCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQ-MLKLSGV 325 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~-lLl~SGI 325 (612)
+...+++.|++|+++++|++|..++++ +++++.+...+|+ .++ .++.||+|+|.-.+.. +|..+|+
T Consensus 261 l~~~l~~~GV~i~~~~~V~~i~~~~~~---~v~~~~v~~~~G~-~~i-----~aD~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 261 VLDRMKEQGMEIISGSNVTRIEEDANG---RVQAVVAMTPNGE-MRI-----ETDFVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHHTTCEEESSCEEEEEEECTTS---BEEEEEEEETTEE-EEE-----ECSCEEECCCCEECCHHHHHHHTC
T ss_pred HHHHHHhCCcEEEECCEEEEEEEcCCC---ceEEEEEEECCCc-EEE-----EcCEEEECcCCccCCccCHHHcCC
Confidence 334456789999999999999875443 6766666545664 234 3689999999877666 6776665
No 88
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.20 E-value=3.5e-06 Score=89.87 Aligned_cols=34 Identities=12% Similarity=0.212 Sum_probs=30.7
Q ss_pred ccEEEECCCCchHHHHHhhhc----cCe---eeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ----NFT---VLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae----g~~---VlvLEkG~~~ 114 (612)
+||+|||+|++|+++|..|++ |.+ |+|+|+.+..
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~ 43 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADW 43 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSS
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCC
Confidence 699999999999999999986 788 9999998643
No 89
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.20 E-value=5.9e-06 Score=88.09 Aligned_cols=36 Identities=33% Similarity=0.452 Sum_probs=33.2
Q ss_pred CcccEEEECCCCchHHHHHhhhc-c-----CeeeEeecCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-N-----FTVLLLERGGVP 114 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g-----~~VlvLEkG~~~ 114 (612)
..|||||||+|++|+.+|..|++ | .+|+||||.+..
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~ 70 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDY 70 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCC
Confidence 56999999999999999999999 8 899999998743
No 90
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.17 E-value=2.7e-06 Score=92.46 Aligned_cols=36 Identities=33% Similarity=0.471 Sum_probs=33.1
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
...+||||||+|++|+.+|.+|.+ |.+|+||||++.
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~ 43 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGED 43 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 346999999999999999999999 999999999873
No 91
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.15 E-value=1.7e-06 Score=87.54 Aligned_cols=34 Identities=24% Similarity=0.318 Sum_probs=32.1
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
..+||||||+|++|+.+|..|++ |.+|+|+|+.+
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 40 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLP 40 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 45899999999999999999999 99999999986
No 92
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.14 E-value=4.4e-05 Score=76.39 Aligned_cols=57 Identities=21% Similarity=0.261 Sum_probs=45.0
Q ss_pred CCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHH
Q 007210 256 NPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLK 321 (612)
Q Consensus 256 ~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl 321 (612)
++.|+++++++.|++|..+++ ++.+|.+...+|+..++ ..+.||+|+|.-.++.++.
T Consensus 194 ~~~gv~~~~~~~v~~i~~~~~----~~~~v~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~ 250 (315)
T 3r9u_A 194 KNEKIELITSASVDEVYGDKM----GVAGVKVKLKDGSIRDL-----NVPGIFTFVGLNVRNEILK 250 (315)
T ss_dssp HCTTEEEECSCEEEEEEEETT----EEEEEEEECTTSCEEEE-----CCSCEEECSCEEECCGGGB
T ss_pred hcCCeEEEeCcEEEEEEcCCC----cEEEEEEEcCCCCeEEe-----ecCeEEEEEcCCCCchhhh
Confidence 578999999999999987764 88999988556765555 4689999999765655543
No 93
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.14 E-value=8.2e-07 Score=89.11 Aligned_cols=35 Identities=23% Similarity=0.379 Sum_probs=31.7
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
++.|||||||||+||++||.+|++ |++|+|+||+.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 578999999999999999999999 99999999974
No 94
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.11 E-value=6.5e-06 Score=86.09 Aligned_cols=61 Identities=18% Similarity=0.336 Sum_probs=48.3
Q ss_pred hhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCC
Q 007210 253 ASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVG 326 (612)
Q Consensus 253 ~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG 326 (612)
..+++.|++|++++.|++|..+++ ++++|+.. +|+. + .++.||+|+|...+..++..+|+-
T Consensus 192 ~~l~~~GV~i~~~~~v~~i~~~~~----~v~~V~~~--dG~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 192 DRHSGAGIRMHYGVRATEIAAEGD----RVTGVVLS--DGNT--L-----PCDLVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHTTCEEECSCCEEEEEEETT----EEEEEEET--TSCE--E-----ECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhCCcEEEECCEEEEEEecCC----cEEEEEeC--CCCE--E-----EcCEEEECcCCccCHHHHHhCCCC
Confidence 445678999999999999987654 88888874 6653 3 359999999987777888888764
No 95
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.08 E-value=1.2e-06 Score=88.23 Aligned_cols=34 Identities=35% Similarity=0.607 Sum_probs=32.1
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.+|||||||+|+||+.||.+|++ |++|+|+||+.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 47999999999999999999999 99999999974
No 96
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.05 E-value=6.8e-06 Score=91.25 Aligned_cols=37 Identities=35% Similarity=0.542 Sum_probs=33.4
Q ss_pred CCcccEEEECCCCchHHHHHhhhc--cCeeeEeecCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVP 114 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~~~ 114 (612)
..++||||||+|++|+++|+.|++ |.+|+||||.+..
T Consensus 30 ~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~ 68 (639)
T 2dkh_A 30 PSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGP 68 (639)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSC
T ss_pred CCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 357999999999999999999998 8999999998643
No 97
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.04 E-value=1.9e-06 Score=87.47 Aligned_cols=38 Identities=26% Similarity=0.469 Sum_probs=33.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhc---cCeeeEeecCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGVPF 115 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~~~ 115 (612)
..++||||||||+||++||++|++ |++|+|+||++..+
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 357899999999999999999974 89999999987553
No 98
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.01 E-value=1.9e-06 Score=86.69 Aligned_cols=35 Identities=20% Similarity=0.308 Sum_probs=32.4
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
...|||||||+|+||+.||.+|++ |++|+|+|+..
T Consensus 2 ~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~ 37 (314)
T 4a5l_A 2 SNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM 37 (314)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 346999999999999999999999 99999999975
No 99
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.99 E-value=2.9e-05 Score=87.52 Aligned_cols=38 Identities=26% Similarity=0.304 Sum_probs=34.3
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
..+||||||+|.+|+++|..|++ |.+|+|||+.+..++
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 46899999999999999999999 999999999876543
No 100
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.98 E-value=2.9e-06 Score=90.22 Aligned_cols=41 Identities=27% Similarity=0.421 Sum_probs=37.2
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFSDV 118 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~~~ 118 (612)
..+|||||||+|.+|+++|.+|++ |++|+||||....++..
T Consensus 9 ~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 9 DTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccc
Confidence 467999999999999999999999 99999999998877653
No 101
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.93 E-value=3.5e-06 Score=91.02 Aligned_cols=39 Identities=23% Similarity=0.399 Sum_probs=35.4
Q ss_pred CCcccEEEECCCCchHHHHHhhhc--cCeeeEeecCCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFS 116 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~~~~~ 116 (612)
+..+||||||||.+|++||++|++ |.+|+||||....++
T Consensus 8 ~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 8 DISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 457999999999999999999987 899999999987665
No 102
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.92 E-value=1.1e-05 Score=87.53 Aligned_cols=35 Identities=37% Similarity=0.572 Sum_probs=31.3
Q ss_pred CcccEEEECCCCchHHHHHhhhc-------------cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-------------NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-------------g~~VlvLEkG~~ 113 (612)
..+||||||+|++|+++|..|++ |.+|+|||+...
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~ 53 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDV 53 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCC
Confidence 45899999999999999999987 689999999653
No 103
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.84 E-value=0.00011 Score=78.46 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=43.9
Q ss_pred hhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCC
Q 007210 252 LASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGV 325 (612)
Q Consensus 252 l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGI 325 (612)
...+++.|++|+++++|++|..+++ +++ |... +|+. + .++.||+|+|.-.++.++..+|+
T Consensus 209 ~~~l~~~GV~i~~~~~v~~i~~~~~----~v~-v~~~--~g~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 209 RHDLEKNDVVVHTGEKVVRLEGENG----KVA-RVIT--DKRT--L-----DADLVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESSS----BEE-EEEE--SSCE--E-----ECSEEEECSCEEECCHHHHHHTC
T ss_pred HHHHHhcCCEEEeCCEEEEEEccCC----eEE-EEEe--CCCE--E-----EcCEEEECCCCCcCHHHHHhCCc
Confidence 3445678999999999999987544 555 5554 5653 3 35899999998776677776665
No 104
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.82 E-value=8.1e-06 Score=84.00 Aligned_cols=36 Identities=31% Similarity=0.454 Sum_probs=33.2
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
..++||||||+|.+|+++|++|++ |.+|+||||...
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 457999999999999999999999 999999999863
No 105
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.79 E-value=7.3e-06 Score=88.10 Aligned_cols=39 Identities=28% Similarity=0.398 Sum_probs=32.5
Q ss_pred CCCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCC
Q 007210 77 HHSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPF 115 (612)
Q Consensus 77 ~~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~ 115 (612)
++.+|||||||+|++|+++|.+|++ |.+|+|+||.+..+
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~G 61 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYG 61 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSS
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 3457999999999999999999999 99999999976543
No 106
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.79 E-value=7.6e-06 Score=86.29 Aligned_cols=35 Identities=46% Similarity=0.571 Sum_probs=32.3
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPF 115 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~ 115 (612)
|||||||+|++|+++|++|++ |.+|+||||.+..+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcc
Confidence 799999999999999999999 99999999976543
No 107
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.77 E-value=3.9e-05 Score=80.35 Aligned_cols=60 Identities=13% Similarity=0.164 Sum_probs=45.1
Q ss_pred hhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCC
Q 007210 253 ASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVG 326 (612)
Q Consensus 253 ~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG 326 (612)
..+++.|++|++++.|++|..++ ++.+|+.. +|+. + .++.||+|+|...+..+|..+|+-
T Consensus 193 ~~l~~~GV~i~~~~~v~~i~~~~-----~~~~v~~~--dg~~--i-----~aD~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 193 GLLTELGVQVELGTGVVGFSGEG-----QLEQVMAS--DGRS--F-----VADSALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHHHHTCEEECSCCEEEEECSS-----SCCEEEET--TSCE--E-----ECSEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHCCCEEEeCCEEEEEeccC-----cEEEEEEC--CCCE--E-----EcCEEEEeeCCeecHHHHHhCCCc
Confidence 34466799999999999997543 55677764 5653 3 359999999988787888888764
No 108
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.71 E-value=1.6e-05 Score=82.39 Aligned_cols=39 Identities=36% Similarity=0.552 Sum_probs=35.2
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
...+||||||+|++|+++|.+|++ |.+|+|||+.+..++
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 66 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGG 66 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCC
Confidence 467999999999999999999999 999999999876544
No 109
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.69 E-value=7.5e-05 Score=80.25 Aligned_cols=35 Identities=23% Similarity=0.188 Sum_probs=29.7
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+.-|||||||+|++|+++|+.|.+ |...+++|+..
T Consensus 37 ~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~ 72 (501)
T 4b63_A 37 DELHDLLCVGFGPASLAIAIALHDALDPRLNKSASN 72 (501)
T ss_dssp TSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC--
T ss_pred CCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccc
Confidence 456999999999999999999999 88888888775
No 110
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.69 E-value=1.7e-05 Score=81.22 Aligned_cols=31 Identities=16% Similarity=0.294 Sum_probs=29.9
Q ss_pred cEEEECCCCchHHHHHhhhc-c------CeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-N------FTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g------~~VlvLEkG~ 112 (612)
||||||+|.+|+++|++|++ | .+|+||||+.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 89999999999999999999 8 8999999986
No 111
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.67 E-value=2.3e-05 Score=82.64 Aligned_cols=42 Identities=26% Similarity=0.395 Sum_probs=37.4
Q ss_pred CCCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCCCC
Q 007210 77 HHSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFSDV 118 (612)
Q Consensus 77 ~~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~~~ 118 (612)
|..+|||||||+|.+|+++|.+|++ |.+|+|||+....++..
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 45 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGES 45 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTS
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccc
Confidence 4567999999999999999999999 99999999998776543
No 112
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.66 E-value=1.7e-05 Score=84.80 Aligned_cols=35 Identities=31% Similarity=0.455 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
.+|||||||+|++|+++|.+|++ |++|+|+||++.
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 46999999999999999999999 999999999863
No 113
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.65 E-value=2.1e-05 Score=82.04 Aligned_cols=39 Identities=33% Similarity=0.429 Sum_probs=34.8
Q ss_pred CCcccEEEECCCCchHHHHHhhhc--cCeeeEeecCCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVPFS 116 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~~~~~ 116 (612)
..++||||||+|.+|+++|.+|++ |.+|+||||.+..++
T Consensus 5 ~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 5 TARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGG 45 (399)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 457999999999999999999998 799999999976554
No 114
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.65 E-value=2e-05 Score=81.18 Aligned_cols=37 Identities=35% Similarity=0.521 Sum_probs=33.5
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
+|||+|||+|.+|+++|.+|++ |.+|+|||+++..++
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGG 38 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSG
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCc
Confidence 3799999999999999999999 999999999875544
No 115
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.64 E-value=2.1e-05 Score=85.02 Aligned_cols=34 Identities=32% Similarity=0.576 Sum_probs=31.8
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-+||+||||+|+||.++|.++++ |+||+|+|+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 36999999999999999999999 99999999865
No 116
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.64 E-value=2e-05 Score=82.52 Aligned_cols=36 Identities=31% Similarity=0.441 Sum_probs=32.5
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCe-eeEeecCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFT-VLLLERGGVP 114 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~-VlvLEkG~~~ 114 (612)
.++||||||+|++|+++|..|++ |.+ |+||||.+..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~ 40 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEI 40 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCc
Confidence 46899999999999999999999 999 9999998643
No 117
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.62 E-value=2.1e-05 Score=85.17 Aligned_cols=38 Identities=32% Similarity=0.449 Sum_probs=34.4
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
..+||||||||.+|+++|.+|++ |.+|+|||+.+..++
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GG 41 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGG 41 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 46899999999999999999999 999999999876544
No 118
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.61 E-value=1.7e-05 Score=84.54 Aligned_cols=38 Identities=29% Similarity=0.448 Sum_probs=33.7
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPF 115 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~ 115 (612)
..+|||||||+|++|+++|.+|++ |.+|+|+||.+..+
T Consensus 2 ~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~G 40 (466)
T 3l8k_A 2 SLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELG 40 (466)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSS
T ss_pred CccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 346999999999999999999999 99999999766543
No 119
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.60 E-value=2.9e-05 Score=80.98 Aligned_cols=36 Identities=31% Similarity=0.457 Sum_probs=33.3
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
..++||||||+|++|+++|..|++ |.+|+||||.+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 456999999999999999999999 999999999864
No 120
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.60 E-value=2.5e-05 Score=83.93 Aligned_cols=39 Identities=33% Similarity=0.491 Sum_probs=34.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
++++||||||+|.+|+++|.+|++ |.+|+|||+.+..++
T Consensus 37 ~~~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG 76 (495)
T 2vvm_A 37 DGPWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGG 76 (495)
T ss_dssp -CCEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBT
T ss_pred ccCCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCC
Confidence 345999999999999999999999 999999999876554
No 121
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.59 E-value=3.5e-05 Score=82.69 Aligned_cols=40 Identities=30% Similarity=0.438 Sum_probs=35.8
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFSD 117 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~~ 117 (612)
...+||||||+|.+|+++|++|++ |.+|+||||.+..++.
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 356899999999999999999999 9999999999876553
No 122
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.59 E-value=2.6e-05 Score=83.54 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=31.3
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
.+|||||||+|++|+++|.+|++ |.+|+||||.
T Consensus 25 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 25 FDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 46999999999999999999999 9999999994
No 123
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.55 E-value=3.8e-05 Score=80.72 Aligned_cols=38 Identities=24% Similarity=0.265 Sum_probs=34.3
Q ss_pred CcccEEEECCCCchHHHHHhhhc-c-CeeeEeecCCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-N-FTVLLLERGGVPFS 116 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG~~~~~ 116 (612)
..+||||||||.+|+++|.+|++ | .+|+||||.+..++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 46899999999999999999999 9 89999999876544
No 124
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=97.55 E-value=2.6e-05 Score=84.29 Aligned_cols=39 Identities=31% Similarity=0.336 Sum_probs=35.2
Q ss_pred CcccEEEECCCCchHHHHHhhhc-c-CeeeEeecCCCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-N-FTVLLLERGGVPFSD 117 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG~~~~~~ 117 (612)
..+||||||||.+|++||.+|++ | .+|+|||+....++.
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr 47 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGR 47 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTT
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCc
Confidence 46899999999999999999999 9 999999998866553
No 125
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.54 E-value=3.7e-05 Score=79.52 Aligned_cols=36 Identities=33% Similarity=0.362 Sum_probs=32.7
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
..+||||||+|++|+++|..|++ |.+|+||||.+..
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 46899999999999999999999 9999999998643
No 126
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=97.53 E-value=3e-05 Score=82.55 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=33.6
Q ss_pred cccEEEECCCCchHHHHHhhhc-c------CeeeEeecCCCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-N------FTVLLLERGGVPFS 116 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g------~~VlvLEkG~~~~~ 116 (612)
.+||||||+|.+|+++|++|++ | .+|+|||+.+..++
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 5899999999999999999999 9 99999999876543
No 127
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.52 E-value=3.1e-05 Score=83.05 Aligned_cols=34 Identities=29% Similarity=0.504 Sum_probs=31.9
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
..+|||||||+|+||+++|.+|++ |.+|+|+||.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 457999999999999999999999 9999999984
No 128
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=97.52 E-value=3.2e-05 Score=82.04 Aligned_cols=38 Identities=24% Similarity=0.317 Sum_probs=34.6
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
.++||||||+|.+|+++|.+|++ |.+|+||||....++
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 46899999999999999999999 999999999876554
No 129
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=97.52 E-value=3.6e-05 Score=82.30 Aligned_cols=39 Identities=28% Similarity=0.399 Sum_probs=33.6
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
...+||||||+|.+|+++|..|++ |.+|+||||....++
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GG 53 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGG 53 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc
Confidence 346899999999999999999999 999999999876654
No 130
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.51 E-value=3.8e-05 Score=83.00 Aligned_cols=35 Identities=29% Similarity=0.500 Sum_probs=32.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
..+|||||||+|+||+++|.+|++ |.+|+|+||.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 457999999999999999999999 99999999964
No 131
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.51 E-value=3.8e-05 Score=81.79 Aligned_cols=33 Identities=24% Similarity=0.382 Sum_probs=31.2
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
.+|||||||+|++|+++|.+|++ |.+|+||||.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 46999999999999999999999 9999999994
No 132
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.49 E-value=3.4e-05 Score=82.53 Aligned_cols=35 Identities=26% Similarity=0.541 Sum_probs=32.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
...|||||||+|++|+++|.+|++ |.+|+|+||..
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 457999999999999999999999 99999999874
No 133
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.49 E-value=3.9e-05 Score=82.18 Aligned_cols=34 Identities=32% Similarity=0.417 Sum_probs=31.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
..+|||||||+|+||+++|.+|++ |++|+|+||+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 357999999999999999999999 9999999964
No 134
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.49 E-value=4.1e-05 Score=82.17 Aligned_cols=33 Identities=30% Similarity=0.452 Sum_probs=31.6
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+|||||||+|+||+++|.+|++ |.+|+|+||++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 5999999999999999999999 99999999975
No 135
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.48 E-value=5.2e-05 Score=77.83 Aligned_cols=38 Identities=24% Similarity=0.281 Sum_probs=34.0
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecC-CCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG-GVPF 115 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG-~~~~ 115 (612)
...+||+|||+|++|+++|++|++ |.+|+||||. ...+
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vG 81 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVG 81 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCB
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccC
Confidence 356899999999999999999999 9999999998 6543
No 136
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.47 E-value=5.2e-05 Score=81.64 Aligned_cols=39 Identities=28% Similarity=0.329 Sum_probs=34.4
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
...+||||||+|.+|+++|.+|++ |.+|+|||+.+..++
T Consensus 11 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 50 (504)
T 1sez_A 11 SSAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGG 50 (504)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCC
Confidence 356899999999999999999999 999999999987654
No 137
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.45 E-value=4.6e-05 Score=76.86 Aligned_cols=34 Identities=32% Similarity=0.698 Sum_probs=32.0
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
...+||||||+|++|+.+|.+|++ |.+|+|||+.
T Consensus 6 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 40 (325)
T 2q7v_A 6 AHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG 40 (325)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC
Confidence 357999999999999999999999 9999999997
No 138
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.44 E-value=5.1e-05 Score=80.79 Aligned_cols=34 Identities=32% Similarity=0.571 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
++|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKA 37 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 46999999999999999999999 99999999974
No 139
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.44 E-value=4.3e-05 Score=80.54 Aligned_cols=34 Identities=29% Similarity=0.294 Sum_probs=31.0
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
..+||||||+|++|+++|+.|++ |.+|+||||.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 35899999999999999999999 99999999986
No 140
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.43 E-value=0.00033 Score=76.87 Aligned_cols=35 Identities=31% Similarity=0.553 Sum_probs=31.6
Q ss_pred CcccEEEECCCCchHHHHHhhhc---cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~ 113 (612)
...||||||+|++|+.+|.+|++ |.+|+|+|+.+.
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~ 72 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEY 72 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSC
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCC
Confidence 35799999999999999999998 589999999873
No 141
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.43 E-value=5.4e-05 Score=80.29 Aligned_cols=34 Identities=26% Similarity=0.509 Sum_probs=32.1
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
..|||||||+|++|+.+|.+|++ |++|+|+|++.
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 46999999999999999999999 99999999974
No 142
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=97.42 E-value=5.7e-05 Score=80.66 Aligned_cols=36 Identities=28% Similarity=0.354 Sum_probs=32.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC--eeeEeecCCCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF--TVLLLERGGVPFS 116 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG~~~~~ 116 (612)
+||||||||.+|+++|++|++ |. +|+|||+.+..++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG 41 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGG 41 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBT
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC
Confidence 699999999999999999999 98 9999999765543
No 143
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.41 E-value=6.3e-05 Score=68.75 Aligned_cols=32 Identities=44% Similarity=0.749 Sum_probs=31.0
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
||++|||+|++|+.+|..|++ |.+|+|||+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 799999999999999999999 99999999986
No 144
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.40 E-value=6.2e-05 Score=74.62 Aligned_cols=33 Identities=36% Similarity=0.649 Sum_probs=31.2
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.|||||||+|++|+.+|.+|++ |.+|+|+|+++
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~ 35 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGE 35 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3899999999999999999999 99999999975
No 145
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.40 E-value=5.9e-05 Score=80.68 Aligned_cols=34 Identities=32% Similarity=0.637 Sum_probs=32.2
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.+|||||||+|++|+.+|.+|++ |.+|+|+||+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 47999999999999999999999 99999999974
No 146
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.40 E-value=5.6e-05 Score=80.93 Aligned_cols=37 Identities=27% Similarity=0.504 Sum_probs=33.5
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
+.+|||||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 4 ~~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 4 DAEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 457999999999999999999999 9999999996543
No 147
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.38 E-value=5.3e-05 Score=81.00 Aligned_cols=37 Identities=30% Similarity=0.539 Sum_probs=33.3
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
..+|||||||+|++|+++|.+|++ |.+|+|+|+.+..
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 356999999999999999999999 9999999996543
No 148
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.38 E-value=7.5e-05 Score=79.58 Aligned_cols=35 Identities=29% Similarity=0.400 Sum_probs=32.4
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
...|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~ 37 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT 37 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 356999999999999999999999 99999999983
No 149
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.36 E-value=9.5e-05 Score=78.85 Aligned_cols=38 Identities=26% Similarity=0.444 Sum_probs=34.2
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
..|||||||+|++|+.+|.+|++ |.+|+|+|+.+...+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG 43 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGG 43 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence 46999999999999999999999 999999999865543
No 150
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.35 E-value=8.3e-05 Score=79.35 Aligned_cols=37 Identities=27% Similarity=0.351 Sum_probs=33.3
Q ss_pred cccEEEECCCCchHHHHHhhhc-c--CeeeEeecCCCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-N--FTVLLLERGGVPFS 116 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g--~~VlvLEkG~~~~~ 116 (612)
.+||||||+|.+|+++|++|++ | .+|+|||+.+...+
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG 43 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGG 43 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBT
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCc
Confidence 5899999999999999999999 8 99999999765443
No 151
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.33 E-value=0.00038 Score=72.01 Aligned_cols=36 Identities=17% Similarity=0.287 Sum_probs=31.7
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
.+..-|||||+|+||+.+|.+|.. +.+|+|+|+.+.
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~ 43 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKY 43 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSS
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCC
Confidence 456789999999999999999977 899999999873
No 152
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.33 E-value=7.6e-05 Score=79.55 Aligned_cols=35 Identities=26% Similarity=0.534 Sum_probs=32.6
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
+|||||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 4899999999999999999999 9999999998644
No 153
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.32 E-value=0.00011 Score=76.19 Aligned_cols=37 Identities=16% Similarity=0.322 Sum_probs=33.6
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
++||+|||+|.+|+++|.+|++ |.+|+|+|+.+..++
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 40 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGG 40 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCC
Confidence 4799999999999999999999 999999999876543
No 154
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.31 E-value=9.1e-05 Score=75.21 Aligned_cols=34 Identities=35% Similarity=0.273 Sum_probs=31.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
+||||||+|.+|+.+|..|++ |.+|+|+|+.+..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 699999999999999999999 9999999998743
No 155
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.30 E-value=9.2e-05 Score=78.62 Aligned_cols=35 Identities=26% Similarity=0.446 Sum_probs=32.3
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
+|||||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3899999999999999999999 9999999998643
No 156
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.29 E-value=7.4e-05 Score=75.05 Aligned_cols=33 Identities=21% Similarity=0.363 Sum_probs=31.0
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
..+||||||+|++|+.+|.+|++ |.+|+|||+.
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 37 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM 37 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC
Confidence 46899999999999999999999 9999999975
No 157
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.29 E-value=9.6e-05 Score=75.88 Aligned_cols=34 Identities=32% Similarity=0.616 Sum_probs=31.9
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
..|||||||+|++|+.+|.+|++ |. +|+|||+.+
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~ 38 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT 38 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC
Confidence 36899999999999999999999 98 999999986
No 158
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.29 E-value=0.0001 Score=79.33 Aligned_cols=33 Identities=36% Similarity=0.660 Sum_probs=31.4
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+|||||||+|++|+.+|.+|++ |.+|+|+|++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999 99999999985
No 159
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.27 E-value=9.5e-05 Score=73.94 Aligned_cols=31 Identities=29% Similarity=0.626 Sum_probs=30.0
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERG 111 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG 111 (612)
|||||||+|++|+.+|..|++ |. +|+|||+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~ 34 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG 34 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC
Confidence 799999999999999999999 99 99999995
No 160
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.26 E-value=0.0001 Score=78.26 Aligned_cols=33 Identities=30% Similarity=0.459 Sum_probs=31.3
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
.+|||||||+|++|+.+|.+|++ |.+|+|+|+.
T Consensus 2 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 2 IETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 35899999999999999999999 9999999997
No 161
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.25 E-value=0.00013 Score=78.31 Aligned_cols=38 Identities=29% Similarity=0.374 Sum_probs=34.4
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
..+||||||+|.+|+.+|..|++ |.+|+|||+.+...+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 46899999999999999999999 999999999876544
No 162
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.25 E-value=0.00011 Score=73.46 Aligned_cols=31 Identities=29% Similarity=0.497 Sum_probs=29.4
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeec
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLER 110 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEk 110 (612)
+|||||||+|++|+.+|.+|++ |.+|+|||+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~ 32 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE 32 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC
Confidence 4899999999999999999999 999999986
No 163
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.25 E-value=0.00019 Score=78.38 Aligned_cols=42 Identities=29% Similarity=0.297 Sum_probs=38.6
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCCCCc
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFSDVN 119 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~~~~ 119 (612)
..+|||||||+|..|+++|..|++ |.|||+|||.++++++..
T Consensus 6 ~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~ 48 (650)
T 1vg0_A 6 PSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWA 48 (650)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred CCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccc
Confidence 457999999999999999999999 999999999999887654
No 164
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.24 E-value=0.00011 Score=78.42 Aligned_cols=36 Identities=25% Similarity=0.380 Sum_probs=33.3
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
.+|||||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 56999999999999999999999 9999999998644
No 165
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.24 E-value=0.00012 Score=77.83 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=31.7
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
+..|||||||+|+||+.+|.+|++ |.+|+|+|+.
T Consensus 3 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 3 TIQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 356999999999999999999999 9999999994
No 166
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.23 E-value=0.0001 Score=74.70 Aligned_cols=34 Identities=32% Similarity=0.491 Sum_probs=31.6
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
...+||||||+|++|+.+|..|++ |.+|+|+|+.
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~ 46 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT 46 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 457999999999999999999999 9999999975
No 167
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.23 E-value=0.0001 Score=78.42 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=31.0
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
+|||||||+|++|+.+|.+|++ |.+|+|+|+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5899999999999999999999 9999999997
No 168
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.23 E-value=0.00014 Score=77.77 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=34.1
Q ss_pred CcccEEEECCCCchHHHHHhhhc-c-CeeeEeecCCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-N-FTVLLLERGGVPFS 116 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG~~~~~ 116 (612)
..+||+|||+|++|+++|.+|++ | .+|+||||.+..++
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG 47 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGG 47 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSG
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCC
Confidence 46899999999999999999999 7 79999999876543
No 169
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.15 E-value=0.00014 Score=73.60 Aligned_cols=32 Identities=25% Similarity=0.330 Sum_probs=30.5
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeec
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLER 110 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEk 110 (612)
..+||||||+|++|+.+|..|++ |.+|+|||+
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEec
Confidence 46899999999999999999999 999999998
No 170
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.14 E-value=0.00019 Score=77.83 Aligned_cols=35 Identities=31% Similarity=0.526 Sum_probs=31.7
Q ss_pred CcccEEEECCCCchHHHHHhhhc----cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ----NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae----g~~VlvLEkG~~ 113 (612)
..+||||||+|++|+++|+.|++ |.+|+|||+...
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCC
Confidence 46899999999999999999998 689999999653
No 171
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.12 E-value=0.00017 Score=76.66 Aligned_cols=33 Identities=36% Similarity=0.614 Sum_probs=31.8
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+|||||||+|+||+.+|.+|++ |.+|+|+|+.+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 6999999999999999999999 99999999986
No 172
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.12 E-value=0.00018 Score=76.68 Aligned_cols=38 Identities=32% Similarity=0.355 Sum_probs=33.2
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cC-eeeEeecCCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGGVPFS 116 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~~~~~ 116 (612)
..+||||||+|.+|+++|.+|++ |. +|+|||+.+..++
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 46899999999999999999999 98 8999999876554
No 173
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.10 E-value=0.00026 Score=79.29 Aligned_cols=38 Identities=32% Similarity=0.383 Sum_probs=34.4
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPF 115 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~ 115 (612)
...+||||||+|++|+.+|..|++ |++|+|+|+.+...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~G 427 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLG 427 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSC
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 456899999999999999999999 99999999987544
No 174
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.09 E-value=0.00023 Score=73.99 Aligned_cols=33 Identities=27% Similarity=0.438 Sum_probs=30.6
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
.|+|||+|++|+++|..|++ |.+|+|+||.+..
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 59999999999999999999 9999999997643
No 175
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.03 E-value=0.00044 Score=73.20 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=33.2
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
..+||+|||||++|+.+|..|++ |++|+|+|+.+..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 46899999999999999999999 9999999998754
No 176
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.01 E-value=0.00027 Score=75.79 Aligned_cols=32 Identities=25% Similarity=0.474 Sum_probs=30.2
Q ss_pred CCcccEEEECCCCchHHHHHhhhc--cCeeeEee
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ--NFTVLLLE 109 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae--g~~VlvLE 109 (612)
...|||||||+|++|+.+|.+|++ |++|+|+|
T Consensus 5 ~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 38 (495)
T 2wpf_A 5 SKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVD 38 (495)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccccCEEEECCChhHHHHHHHHHHhcCCeEEEEe
Confidence 457999999999999999999998 89999999
No 177
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.01 E-value=0.00024 Score=78.13 Aligned_cols=34 Identities=24% Similarity=0.457 Sum_probs=31.7
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
...|||||||+|+||+.+|.+|++ |++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 456999999999999999999999 9999999984
No 178
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.01 E-value=0.00029 Score=72.82 Aligned_cols=33 Identities=27% Similarity=0.511 Sum_probs=30.4
Q ss_pred cEEEECCCCchHHHHHhhhc---cCeeeEeecCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGVP 114 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~~ 114 (612)
||||||+|++|+++|..|++ |.+|+||||.+..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 89999999999999999997 7999999998643
No 179
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.97 E-value=0.00034 Score=74.96 Aligned_cols=30 Identities=23% Similarity=0.503 Sum_probs=29.0
Q ss_pred cccEEEECCCCchHHHHHhhhc--cCeeeEee
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ--NFTVLLLE 109 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae--g~~VlvLE 109 (612)
+|||||||+|++|+.+|.+|++ |++|+|+|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 5999999999999999999998 89999999
No 180
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.95 E-value=0.00035 Score=72.27 Aligned_cols=62 Identities=10% Similarity=0.139 Sum_probs=43.7
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVG 326 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG 326 (612)
+...+++.|++|+++++|++|..+++ . ..|+. .+|+. + .++.||+|+|.-.+..+|..+|+-
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~~----~-~~v~~--~~g~~--i-----~~d~vv~a~G~~p~~~l~~~~g~~ 254 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAGE----G-LEAHL--SDGEV--I-----PCDLVVSAVGLRPRTELAFAAGLA 254 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEETT----E-EEEEE--TTSCE--E-----EESEEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecCC----E-EEEEE--CCCCE--E-----ECCEEEECcCCCcCHHHHHHCCCC
Confidence 33445678999999999999987543 2 34444 36643 3 248999999987776777777663
No 181
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.94 E-value=0.00036 Score=73.38 Aligned_cols=61 Identities=18% Similarity=0.273 Sum_probs=45.4
Q ss_pred hhcCCCCcEEEeccEEEEEEe--cCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCC
Q 007210 253 ASANPQKITVLIRATVQKIVF--DTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVG 326 (612)
Q Consensus 253 ~~a~~~g~~v~~~~~V~~l~~--~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG 326 (612)
..+++.|++|++++.|++|.. +++ ++++|.+. +|+. + .++.||+|+|.-.+..+|..+|+-
T Consensus 199 ~~l~~~GV~i~~~~~v~~i~~~~~~~----~v~~v~~~--~G~~--i-----~~D~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 199 HLHREAGVDIRTGTQVCGFEMSTDQQ----KVTAVLCE--DGTR--L-----PADLVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHHTCEEECSCCEEEEEECTTTC----CEEEEEET--TSCE--E-----ECSEEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhCCeEEEeCCEEEEEEeccCCC----cEEEEEeC--CCCE--E-----EcCEEEECCCCCcCcchhhccCCC
Confidence 345667999999999999986 333 77778764 5643 3 358999999987666788777763
No 182
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.94 E-value=0.00033 Score=75.67 Aligned_cols=33 Identities=27% Similarity=0.487 Sum_probs=30.9
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeec
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLER 110 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEk 110 (612)
...|||||||+|++|+++|.+|++ |.+|+|+|+
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~ 243 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE 243 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC
Confidence 457999999999999999999999 999999986
No 183
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=96.92 E-value=0.00027 Score=76.12 Aligned_cols=34 Identities=41% Similarity=0.590 Sum_probs=29.1
Q ss_pred cccEEEECCCCchHHHHHhhhc----cCeeeEeecCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ----NFTVLLLERGGV 113 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae----g~~VlvLEkG~~ 113 (612)
.+||||||+|++|+++|+.|++ |.+|+|||+...
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~ 39 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNV 39 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC---
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCC
Confidence 3799999999999999999997 689999999753
No 184
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.91 E-value=0.00043 Score=75.27 Aligned_cols=35 Identities=31% Similarity=0.466 Sum_probs=31.7
Q ss_pred CcccEEEECCCCchHHHHHhhhc----cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ----NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae----g~~VlvLEkG~~ 113 (612)
..+||||||+|++|+++|..|++ |.+|+|||+.+.
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~ 62 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDI 62 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCC
Confidence 46899999999999999999998 589999999753
No 185
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=96.87 E-value=0.00037 Score=77.48 Aligned_cols=35 Identities=31% Similarity=0.528 Sum_probs=32.1
Q ss_pred CcccEEEECCCCchHHHHHhhhc------cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ------NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae------g~~VlvLEkG~~ 113 (612)
.++||||||+|++|+++|+.|++ |.+|+||||.+.
T Consensus 7 ~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 7 SYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 46999999999999999999998 899999999864
No 186
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.85 E-value=0.00041 Score=74.50 Aligned_cols=33 Identities=24% Similarity=0.455 Sum_probs=30.6
Q ss_pred cccEEEECCCCchHHHHHhhhc----cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ----NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae----g~~VlvLEkG~ 112 (612)
.|||||||+|++|+.+|.+|++ |.+|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 4899999999999999999987 57999999986
No 187
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.81 E-value=0.00052 Score=73.48 Aligned_cols=35 Identities=17% Similarity=0.270 Sum_probs=32.4
Q ss_pred cccEEEECCCCchHHHHHhhhc-c---CeeeEeecCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-N---FTVLLLERGGVP 114 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g---~~VlvLEkG~~~ 114 (612)
.+||||||+|++|+.+|.+|++ | .+|+|+|+.+..
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 5899999999999999999999 8 999999998743
No 188
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.76 E-value=0.00078 Score=75.10 Aligned_cols=38 Identities=24% Similarity=0.267 Sum_probs=34.2
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
..+||||||+|+||+.+|..|++ |++|+|+|+.+...+
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg 410 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGG 410 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCC
Confidence 46899999999999999999999 999999999875543
No 189
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.76 E-value=0.00058 Score=70.17 Aligned_cols=35 Identities=34% Similarity=0.573 Sum_probs=31.0
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
.--||||||+|+||+.+|.+|++ | +|+|+|+.+..
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 34699999999999999999999 9 99999998754
No 190
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=96.73 E-value=0.00072 Score=75.17 Aligned_cols=39 Identities=26% Similarity=0.313 Sum_probs=34.8
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
...+||+|||+|++|+++|..|++ |++|+|+|+.+..++
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 356899999999999999999999 999999999876544
No 191
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.72 E-value=0.00057 Score=79.26 Aligned_cols=63 Identities=13% Similarity=0.166 Sum_probs=45.5
Q ss_pred hcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEe--C---CCCeEEEEeecCCCceEEecCCCcCChHHHHHcC
Q 007210 254 SANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKD--E---NGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSG 324 (612)
Q Consensus 254 ~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~--~---~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SG 324 (612)
.+++.|++|++++.|++|.-++++ ++.+|++.+ . +|+..++ ..+.||+|+|---+..++...|
T Consensus 325 ~l~~~GV~v~~~~~v~~i~~~~~~---~v~~v~~~~~~~~~~~G~~~~i-----~~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 325 QAVADGVQVISGSVVVDTEADENG---ELSAIVVAELDEARELGGTQRF-----EADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHHTTCCEEETEEEEEEEECTTS---CEEEEEEEEECTTCCEEEEEEE-----ECSEEEEECCEEECCHHHHHTT
T ss_pred HHHhCCeEEEeCCEeEEEeccCCC---CEEEEEEEeccccCCCCceEEE-----EcCEEEECCCcCcChHHHHhCC
Confidence 345679999999999999864122 788999875 2 2433445 3589999999776777776554
No 192
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.69 E-value=0.0007 Score=71.67 Aligned_cols=33 Identities=24% Similarity=0.163 Sum_probs=30.8
Q ss_pred ccEEEECCCCchHHHHHhhhc---cCeeeEeecCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGV 113 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~ 113 (612)
+||||||+|++|+.+|.+|++ |.+|+|+|+.+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~ 36 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDN 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCC
Confidence 599999999999999999998 789999999874
No 193
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.68 E-value=0.00064 Score=72.84 Aligned_cols=39 Identities=36% Similarity=0.461 Sum_probs=34.1
Q ss_pred CCcccEEEECCCCchHHHHHhhhccCeeeEeecCCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQNFTVLLLERGGVPFS 116 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Laeg~~VlvLEkG~~~~~ 116 (612)
...+||||||+|++|+.+|.+|++.++|+|||+++...+
T Consensus 106 ~~~~dVvIIGgG~aGl~aA~~L~~~~~V~vie~~~~~GG 144 (493)
T 1y56_A 106 RVVVDVAIIGGGPAGIGAALELQQYLTVALIEERGWLGG 144 (493)
T ss_dssp EEEESCCEECCSHHHHHHHHHHTTTCCEEEECTTSSSSC
T ss_pred cccCCEEEECccHHHHHHHHHHHhcCCEEEEeCCCCCCC
Confidence 346899999999999999999987789999999876543
No 194
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.68 E-value=0.00094 Score=75.11 Aligned_cols=38 Identities=24% Similarity=0.317 Sum_probs=34.1
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
..+||+|||+|+||+.+|..|++ |++|+|+|+.+...+
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG 426 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGG 426 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCC
Confidence 46899999999999999999999 999999999876443
No 195
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.68 E-value=0.0053 Score=62.53 Aligned_cols=60 Identities=13% Similarity=0.152 Sum_probs=44.6
Q ss_pred CCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCC
Q 007210 257 PQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGV 325 (612)
Q Consensus 257 ~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGI 325 (612)
+.|++|+++++|++|..+++ ++.+|.+...+|+...+ ..+.||+|+|.-.++.+|..+|+
T Consensus 214 ~~gv~i~~~~~v~~i~~~~~----~v~~v~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~~~ 273 (360)
T 3ab1_A 214 NGTIDVYLETEVASIEESNG----VLTRVHLRSSDGSKWTV-----EADRLLILIGFKSNLGPLARWDL 273 (360)
T ss_dssp HTSEEEESSEEEEEEEEETT----EEEEEEEEETTCCEEEE-----ECSEEEECCCBCCSCGGGGGSSC
T ss_pred cCceEEEcCcCHHHhccCCC----ceEEEEEEecCCCeEEE-----eCCEEEECCCCCCCHHHHHhhcc
Confidence 45899999999999987654 88889887456755555 35899999996555566655543
No 196
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.65 E-value=0.00082 Score=70.09 Aligned_cols=36 Identities=19% Similarity=0.313 Sum_probs=32.3
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cC--eeeEeecCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NF--TVLLLERGGVP 114 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG~~~ 114 (612)
..+||||||+|++|+.+|.+|++ |. +|+|+|+.+..
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 46899999999999999999999 86 69999998753
No 197
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.64 E-value=0.00098 Score=71.38 Aligned_cols=61 Identities=15% Similarity=0.288 Sum_probs=44.3
Q ss_pred hhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCC
Q 007210 252 LASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVG 326 (612)
Q Consensus 252 l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG 326 (612)
...+++.|++|++++.|++|..+++ ++ .|+. .+|+. + .++.||+|+|...+..++..+|+-
T Consensus 233 ~~~l~~~GV~v~~~~~V~~i~~~~~----~~-~v~l--~dG~~--i-----~aD~Vv~a~G~~pn~~l~~~~gl~ 293 (493)
T 1m6i_A 233 MEKVRREGVKVMPNAIVQSVGVSSG----KL-LIKL--KDGRK--V-----ETDHIVAAVGLEPNVELAKTGGLE 293 (493)
T ss_dssp HHHHHTTTCEEECSCCEEEEEEETT----EE-EEEE--TTSCE--E-----EESEEEECCCEEECCTTHHHHTCC
T ss_pred HHHHHhcCCEEEeCCEEEEEEecCC----eE-EEEE--CCCCE--E-----ECCEEEECCCCCccHHHHHHcCCc
Confidence 3445678999999999999976543 43 4554 36753 3 248999999987777788777763
No 198
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.61 E-value=0.00099 Score=70.44 Aligned_cols=36 Identities=22% Similarity=0.391 Sum_probs=32.2
Q ss_pred cccEEEECCCCchHHHHHhhhc---cCeeeEeecCCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGVPF 115 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~~~ 115 (612)
.+||||||+|++|+.+|.+|++ +.+|+|+|+.+...
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~ 41 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVS 41 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccc
Confidence 4799999999999999999998 57999999998543
No 199
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=96.58 E-value=0.0012 Score=74.77 Aligned_cols=39 Identities=26% Similarity=0.313 Sum_probs=34.8
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPFS 116 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~~ 116 (612)
...+||+|||+|++|+++|..|++ |++|+|||+....++
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG 315 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 315 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCC
Confidence 346799999999999999999999 999999999876554
No 200
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.58 E-value=0.00099 Score=70.48 Aligned_cols=35 Identities=14% Similarity=0.277 Sum_probs=31.8
Q ss_pred ccEEEECCCCchHHHHHhhhc---cCeeeEeecCCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGVPF 115 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~~~ 115 (612)
.||||||+|++|+.+|.+|++ |.+|+|+|+.+...
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCc
Confidence 599999999999999999998 68999999998543
No 201
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.54 E-value=0.0074 Score=59.90 Aligned_cols=55 Identities=20% Similarity=0.434 Sum_probs=41.8
Q ss_pred CCcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCChHHHH
Q 007210 258 QKITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGTPQMLK 321 (612)
Q Consensus 258 ~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl 321 (612)
.|++|+++++|++|..+++ ++.+|++.+ .+|+...+ ..+.||+|+|.-.++.+|.
T Consensus 193 ~gv~v~~~~~v~~i~~~~~----~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 193 KNVDIILNAQTTEVKGDGS----KVVGLEYRDRVSGDIHNI-----ELAGIFVQIGLLPNTNWLE 248 (310)
T ss_dssp TTEEEESSEEEEEEEESSS----SEEEEEEEETTTCCEEEE-----ECSEEEECSCEEESCGGGT
T ss_pred CCeEEecCCceEEEEcCCC----cEEEEEEEECCCCcEEEE-----EcCEEEEeeCCccCchHHh
Confidence 5899999999999986543 788999986 34655555 3589999998765666553
No 202
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.54 E-value=0.013 Score=60.38 Aligned_cols=32 Identities=22% Similarity=0.467 Sum_probs=30.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-+++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 178 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE 178 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc
Confidence 479999999999999999999 99999999986
No 203
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=96.49 E-value=0.0098 Score=59.27 Aligned_cols=57 Identities=16% Similarity=0.229 Sum_probs=42.3
Q ss_pred CCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeC-C-CCeEEEEeecCCCceEEecCCCcCChHHHH
Q 007210 256 NPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDE-N-GNQHQAFLAGNPKSEVILSCGAIGTPQMLK 321 (612)
Q Consensus 256 ~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~-~-g~~~~v~~~~~a~k~VILaaG~~~sp~lLl 321 (612)
++.|++|+++++|++|..+++ ++++|.+.+. + |+..++. .+.||+|+|.-.++.+|.
T Consensus 195 ~~~gv~i~~~~~v~~i~~~~~----~v~~v~~~~~~~~g~~~~i~-----~D~vv~a~G~~p~~~~~~ 253 (320)
T 1trb_A 195 ENGNIILHTNRTLEEVTGDQM----GVTGVRLRDTQNSDNIESLD-----VAGLFVAIGHSPNTAIFE 253 (320)
T ss_dssp HTSSEEEECSCEEEEEEECSS----SEEEEEEECCTTCCCCEEEE-----CSEEEECSCEEESCGGGT
T ss_pred ccCCeEEEcCceeEEEEcCCC----ceEEEEEEeccCCCceEEEE-----cCEEEEEeCCCCChHHhc
Confidence 457999999999999987654 7889998752 2 5444553 589999999765665543
No 204
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=96.46 E-value=0.0012 Score=70.54 Aligned_cols=35 Identities=31% Similarity=0.669 Sum_probs=31.4
Q ss_pred cccEEEECCCCchHHHHHhhhc---cCeeeEeecCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGVP 114 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~~ 114 (612)
.+||||||+|++|+.+|.+|++ |.+|+|||+.+..
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 3699999999999999999998 6899999998754
No 205
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.45 E-value=0.0014 Score=69.42 Aligned_cols=35 Identities=29% Similarity=0.391 Sum_probs=32.0
Q ss_pred cccEEEECCCCchHHHHHhhhc--------cCeeeEeecCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ--------NFTVLLLERGGVP 114 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae--------g~~VlvLEkG~~~ 114 (612)
.+||||||+|++|+.+|..|++ |.+|+|+|+.+..
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 5899999999999999999988 7999999998754
No 206
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.43 E-value=0.0013 Score=69.50 Aligned_cols=34 Identities=21% Similarity=0.353 Sum_probs=31.0
Q ss_pred ccEEEECCCCchHHHHHhhhc---cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~~ 114 (612)
.||||||+|++|+.+|.+|++ |.+|+|+|+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 389999999999999999998 7899999998754
No 207
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.40 E-value=0.0016 Score=68.93 Aligned_cols=37 Identities=35% Similarity=0.410 Sum_probs=32.9
Q ss_pred CcccEEEECCCCchHHHHHhhhc-c--CeeeEeecCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-N--FTVLLLERGGVPF 115 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g--~~VlvLEkG~~~~ 115 (612)
..+||||||+|++|+.+|..|++ | .+|+|+|+.+...
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 35899999999999999999999 8 9999999987653
No 208
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.33 E-value=0.0017 Score=75.78 Aligned_cols=37 Identities=16% Similarity=0.275 Sum_probs=33.1
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cC-eeeEeecCCCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGGVPF 115 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~~~~ 115 (612)
..+||+|||||+||+.+|.+|++ |+ +|+|+|+.+...
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~G 224 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVG 224 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCS
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCC
Confidence 46899999999999999999999 98 799999986543
No 209
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.26 E-value=0.0094 Score=62.47 Aligned_cols=32 Identities=38% Similarity=0.565 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~ 182 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA 182 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 369999999999999999999 99999999986
No 210
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.23 E-value=0.0076 Score=63.86 Aligned_cols=32 Identities=28% Similarity=0.418 Sum_probs=30.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 202 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP 202 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC
Confidence 479999999999999999999 99999999986
No 211
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.19 E-value=0.0031 Score=66.28 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=31.1
Q ss_pred ccEEEECCCCchHHHHHhhhc----cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ----NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae----g~~VlvLEkG~~~ 114 (612)
.||||||+|++|+.+|.+|++ |.+|+|||+.+..
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~ 42 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYF 42 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCC
Confidence 699999999999999999987 6899999999754
No 212
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.18 E-value=0.015 Score=62.43 Aligned_cols=55 Identities=20% Similarity=0.429 Sum_probs=42.3
Q ss_pred CCcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCChHHHH
Q 007210 258 QKITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGTPQMLK 321 (612)
Q Consensus 258 ~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl 321 (612)
.|++|++++.|++|.-+++ ++++|.+.+ .+|+...+. .+.||+|+|...+..+|.
T Consensus 404 ~gV~v~~~~~v~~i~~~~~----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~pn~~~l~ 459 (521)
T 1hyu_A 404 KNVDIILNAQTTEVKGDGS----KVVGLEYRDRVSGDIHSVA-----LAGIFVQIGLLPNTHWLE 459 (521)
T ss_dssp TTEEEECSEEEEEEEECSS----SEEEEEEEETTTCCEEEEE-----CSEEEECCCEEESCGGGT
T ss_pred CCcEEEeCCEEEEEEcCCC----cEEEEEEEeCCCCceEEEE-----cCEEEECcCCCCCchHHh
Confidence 5999999999999986544 889999986 346655553 589999999765555553
No 213
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.17 E-value=0.0021 Score=67.50 Aligned_cols=35 Identities=23% Similarity=0.341 Sum_probs=31.6
Q ss_pred ccEEEECCCCchHHHHHhhhc---cCeeeEeecCCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGVPF 115 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~~~ 115 (612)
.||||||+|++|+.+|.+|++ |.+|+|||+.+...
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~ 40 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG 40 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCC
Confidence 599999999999999999998 58999999987543
No 214
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.15 E-value=0.0023 Score=66.68 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=30.2
Q ss_pred cEEEECCCCchHHHHHhhhc----cCeeeEeecCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ----NFTVLLLERGGVP 114 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae----g~~VlvLEkG~~~ 114 (612)
||||||+|++|+.+|.+|++ |.+|+|||+.+..
T Consensus 3 ~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~ 39 (409)
T 3h8l_A 3 KVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFS 39 (409)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEE
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCc
Confidence 79999999999999999987 6899999998743
No 215
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.13 E-value=0.0086 Score=63.25 Aligned_cols=32 Identities=34% Similarity=0.463 Sum_probs=30.0
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~ 200 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD 200 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC
Confidence 469999999999999999999 99999999986
No 216
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=95.95 E-value=0.026 Score=56.55 Aligned_cols=60 Identities=13% Similarity=0.143 Sum_probs=42.8
Q ss_pred CCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeC-CCCeEEEEeecCCCceEEecCCCcCChHHHHHcCC
Q 007210 256 NPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDE-NGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGV 325 (612)
Q Consensus 256 ~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~-~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGI 325 (612)
++.|+++++++.|++|..+ + ++.+|.+.+. +|+...+ ..+.||+|+|--.+..+|..+|+
T Consensus 202 ~~~gv~v~~~~~v~~i~~~-~----~~~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 202 EEGRLEVLTPYELRRVEGD-E----RVRWAVVFHNQTQEELAL-----EVDAVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp HTTSSEEETTEEEEEEEES-S----SEEEEEEEETTTCCEEEE-----ECSEEEECCCEEEECGGGGGSCC
T ss_pred ccCCeEEecCCcceeEccC-C----CeeEEEEEECCCCceEEE-----ecCEEEEeecCCCCchHhhhcce
Confidence 3468999999999999763 3 6778888743 5654555 35899999997655556555443
No 217
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.91 E-value=0.0047 Score=64.89 Aligned_cols=32 Identities=19% Similarity=0.393 Sum_probs=29.0
Q ss_pred EEEECCCCchHHHHHhhhc-c--CeeeEeecCCCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-N--FTVLLLERGGVP 114 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g--~~VlvLEkG~~~ 114 (612)
|||||+|+||+.+|.+|++ | .+|+|+|+.+..
T Consensus 3 VvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 8999999999999999998 6 579999998754
No 218
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=95.89 E-value=0.008 Score=63.42 Aligned_cols=32 Identities=25% Similarity=0.258 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 200 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD 200 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 379999999999999999999 99999999986
No 219
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=95.88 E-value=0.017 Score=61.65 Aligned_cols=32 Identities=31% Similarity=0.446 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 207 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG 207 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 369999999999999999999 99999999986
No 220
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.88 E-value=0.033 Score=55.11 Aligned_cols=58 Identities=19% Similarity=0.179 Sum_probs=42.9
Q ss_pred CCCcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCChHHHHHc
Q 007210 257 PQKITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLS 323 (612)
Q Consensus 257 ~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~S 323 (612)
+.|++|++++.+++|..+++ ++.+|.+.+ .+|+...+. .+.||+|+|.-.+..+|..+
T Consensus 191 ~~gv~v~~~~~v~~i~~~~~----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGDAS----GVSSLSIKNTATNEKRELV-----VPGFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp CTTEEEETTEEEEEEEEETT----EEEEEEEEETTTCCEEEEE-----CSEEEECSCEEECCGGGBCT
T ss_pred CCCeEEEeCCEEEEEECCCC----cEeEEEEEecCCCceEEEe-----cCEEEEEecCccChhhhhcc
Confidence 46899999999999987644 788888874 256655553 58999999976665665443
No 221
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=95.85 E-value=0.013 Score=62.35 Aligned_cols=32 Identities=22% Similarity=0.359 Sum_probs=30.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 216 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP 216 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC
Confidence 479999999999999999999 99999999986
No 222
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=95.85 E-value=0.014 Score=61.76 Aligned_cols=32 Identities=25% Similarity=0.420 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 207 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP 207 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC
Confidence 369999999999999999999 99999999986
No 223
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=95.82 E-value=0.0032 Score=69.62 Aligned_cols=35 Identities=23% Similarity=0.377 Sum_probs=32.4
Q ss_pred cccEEEECCCCchHHHHHhhhc-c--------CeeeEeecCC-CC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-N--------FTVLLLERGG-VP 114 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g--------~~VlvLEkG~-~~ 114 (612)
..+|+|||+|++|+++|.+|++ | .+|.|+|+.+ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 5799999999999999999999 8 9999999987 55
No 224
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.82 E-value=0.004 Score=67.79 Aligned_cols=33 Identities=24% Similarity=0.514 Sum_probs=30.6
Q ss_pred cEEEECCCCchHHHHHhhhc---cCeeeEeecCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ---NFTVLLLERGGVP 114 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~~~ 114 (612)
||||||+|++|+.+|.+|++ +.+|+|+|+.+..
T Consensus 3 ~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 3 KILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred cEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 89999999999999999998 5799999999864
No 225
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=95.77 E-value=0.012 Score=62.66 Aligned_cols=33 Identities=30% Similarity=0.534 Sum_probs=30.4
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.-+++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 219 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERND 219 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC
Confidence 3579999999999999999999 99999999985
No 226
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.0083 Score=63.85 Aligned_cols=32 Identities=31% Similarity=0.406 Sum_probs=29.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGE 218 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCC
Confidence 369999999999999999999 99999999986
No 227
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.72 E-value=0.026 Score=60.14 Aligned_cols=32 Identities=31% Similarity=0.417 Sum_probs=29.7
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 231 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD 231 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc
Confidence 368999999999999999999 99999999986
No 228
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=95.70 E-value=0.047 Score=54.43 Aligned_cols=55 Identities=16% Similarity=0.290 Sum_probs=40.9
Q ss_pred CCCcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCChHHHH
Q 007210 257 PQKITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGTPQMLK 321 (612)
Q Consensus 257 ~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl 321 (612)
+.|++|+++++|++|..+ + ++.+|++.+ .+|+..++. .+.||+|+|.-.+..+|.
T Consensus 200 ~~gv~i~~~~~v~~i~~~-~----~v~~v~~~~~~~g~~~~i~-----~D~vi~a~G~~p~~~~l~ 255 (325)
T 2q7v_A 200 NPKMKFIWDTAVEEIQGA-D----SVSGVKLRNLKTGEVSELA-----TDGVFIFIGHVPNTAFVK 255 (325)
T ss_dssp CTTEEEECSEEEEEEEES-S----SEEEEEEEETTTCCEEEEE-----CSEEEECSCEEESCGGGT
T ss_pred cCCceEecCCceEEEccC-C----cEEEEEEEECCCCcEEEEE-----cCEEEEccCCCCChHHHh
Confidence 359999999999999864 2 778899875 356655553 589999998665655553
No 229
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.66 E-value=0.018 Score=60.80 Aligned_cols=32 Identities=31% Similarity=0.556 Sum_probs=30.2
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 203 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAG 203 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 579999999999999999999 99999999986
No 230
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.62 E-value=0.025 Score=59.94 Aligned_cols=32 Identities=25% Similarity=0.366 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 211 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG 211 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC
Confidence 369999999999999999999 99999999986
No 231
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.59 E-value=0.019 Score=60.54 Aligned_cols=31 Identities=29% Similarity=0.521 Sum_probs=29.5
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 182 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQNYNVNLIDGHE 182 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred eEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 69999999999999999999 99999999986
No 232
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=95.51 E-value=0.0062 Score=63.12 Aligned_cols=57 Identities=11% Similarity=0.011 Sum_probs=39.6
Q ss_pred cCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCCC
Q 007210 255 ANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGVG 326 (612)
Q Consensus 255 a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGIG 326 (612)
.++.|+++++++.+..+..+.+. ..|+. .+|+.. ..+.||+++|- ..+.++..||+-
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~~-----~~v~~--~~g~~i-------~~D~vi~~~g~-~~~~~~~~~gl~ 268 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTEA-----MTVET--SFGETF-------KAAVINLIPPQ-RAGKIAQSASLT 268 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETTT-----TEEEE--TTSCEE-------ECSEEEECCCE-EECHHHHHTTCC
T ss_pred HHhcCcEEEeCceEEEEEecccc-----eEEEc--CCCcEE-------EeeEEEEecCc-CCchhHhhcccc
Confidence 46789999999999998876542 22333 467643 24889998874 345688888774
No 233
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.38 E-value=0.0086 Score=64.05 Aligned_cols=35 Identities=9% Similarity=0.285 Sum_probs=31.6
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
++.-|||||+|.||+.+|.+|.+ +++|+|||+.++
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 34579999999999999999998 899999999864
No 234
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.37 E-value=0.08 Score=52.86 Aligned_cols=59 Identities=19% Similarity=0.211 Sum_probs=42.5
Q ss_pred CCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeC-CCCeEEEEeecCCCceEEecCCCcCChHHHH
Q 007210 256 NPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDE-NGNQHQAFLAGNPKSEVILSCGAIGTPQMLK 321 (612)
Q Consensus 256 ~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~-~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl 321 (612)
++.|++|++++.|++|..++++ .++.+|.+.+. +|+..++ ..+.||+|+|.-.+..+|.
T Consensus 206 ~~~gv~i~~~~~v~~i~~~~~~--~~v~~v~~~~~~~g~~~~i-----~~D~vi~a~G~~p~~~~~~ 265 (333)
T 1vdc_A 206 SNPKIDVIWNSSVVEAYGDGER--DVLGGLKVKNVVTGDVSDL-----KVSGLFFAIGHEPATKFLD 265 (333)
T ss_dssp TCTTEEEECSEEEEEEEESSSS--SSEEEEEEEETTTCCEEEE-----ECSEEEECSCEEESCGGGT
T ss_pred hCCCeeEecCCceEEEeCCCCc--cceeeEEEEecCCCceEEE-----ecCEEEEEeCCccchHHhh
Confidence 3569999999999999865431 26778888753 5655555 3589999999776665553
No 235
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.30 E-value=0.032 Score=58.94 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=29.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.++|||+|..|+-+|..|++ |.+|.|+|+.+
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~ 199 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALED 199 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 69999999999999999999 99999999886
No 236
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.21 E-value=0.033 Score=58.82 Aligned_cols=32 Identities=22% Similarity=0.305 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 204 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP 204 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 379999999999999999999 99999999986
No 237
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.20 E-value=0.015 Score=61.57 Aligned_cols=32 Identities=19% Similarity=0.340 Sum_probs=30.0
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 210 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS 210 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC
Confidence 479999999999999999999 99999999986
No 238
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.19 E-value=0.026 Score=60.29 Aligned_cols=32 Identities=22% Similarity=0.400 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 215 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD 215 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 368999999999999999999 99999999886
No 239
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=95.15 E-value=0.06 Score=58.37 Aligned_cols=31 Identities=32% Similarity=0.480 Sum_probs=29.6
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.++|||+|..|+-+|..|++ |.+|.++|+.+
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 184 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELAD 184 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC
Confidence 79999999999999999999 99999999986
No 240
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.12 E-value=0.031 Score=59.69 Aligned_cols=31 Identities=19% Similarity=0.398 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 178 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 209 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKRLGIDSYIFARGN 209 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred eEEEECChHHHHHHHHHHHHcCCeEEEEecCC
Confidence 69999999999999999999 99999999986
No 241
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=95.10 E-value=0.038 Score=58.68 Aligned_cols=32 Identities=19% Similarity=0.321 Sum_probs=30.0
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~ 218 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD 218 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC
Confidence 479999999999999999999 99999999986
No 242
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.04 E-value=0.05 Score=54.19 Aligned_cols=59 Identities=14% Similarity=0.255 Sum_probs=42.5
Q ss_pred CCCcEEEeccEEEEEEecCCCCCCeEEEEEEEe-CCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCC
Q 007210 257 PQKITVLIRATVQKIVFDTSGKRPKAVGVIFKD-ENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGV 325 (612)
Q Consensus 257 ~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~-~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGI 325 (612)
+.|++++++++|++|..++ .+.+|.+.+ .+|+..++ ..+.||+|+|--.++.+|..+|+
T Consensus 201 ~~gv~~~~~~~v~~i~~~~-----~~~~v~~~~~~~g~~~~~-----~~D~vv~a~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 201 ASKVNVLTPFVPAELIGED-----KIEQLVLEEVKGDRKEIL-----EIDDLIVNYGFVSSLGPIKNWGL 260 (332)
T ss_dssp HSSCEEETTEEEEEEECSS-----SCCEEEEEETTSCCEEEE-----ECSEEEECCCEECCCGGGGGSSC
T ss_pred cCCeEEEeCceeeEEecCC-----ceEEEEEEecCCCceEEE-----ECCEEEEeeccCCCchHHhhcCc
Confidence 3588999999999997653 356788876 34444555 35899999997776777666654
No 243
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.90 E-value=0.03 Score=59.54 Aligned_cols=32 Identities=31% Similarity=0.550 Sum_probs=29.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~ 224 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD 224 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC
Confidence 479999999999999999999 99999999986
No 244
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=94.86 E-value=0.058 Score=57.16 Aligned_cols=32 Identities=25% Similarity=0.291 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 213 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD 213 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC
Confidence 369999999999999999999 99999999986
No 245
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.81 E-value=0.035 Score=59.13 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 227 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD 227 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 369999999999999999999 99999999986
No 246
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=94.77 E-value=0.073 Score=56.39 Aligned_cols=32 Identities=25% Similarity=0.287 Sum_probs=29.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 220 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD 220 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC
Confidence 369999999999999999999 99999999986
No 247
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=94.75 E-value=0.013 Score=61.32 Aligned_cols=56 Identities=27% Similarity=0.434 Sum_probs=40.4
Q ss_pred cCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCC
Q 007210 255 ANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGV 325 (612)
Q Consensus 255 a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGI 325 (612)
.++.|+++++++.|+++. .+ + +.+.+.+|...++ .++.||+++|.-. +.++..||.
T Consensus 210 l~~~GV~~~~~~~v~~v~--~~----~---~~~~~~~g~~~~i-----~~d~vi~~~G~~~-~~~~~~~~~ 265 (430)
T 3hyw_A 210 FAERNIDWIANVAVKAIE--PD----K---VIYEDLNGNTHEV-----PAKFTMFMPSFQG-PEVVASAGD 265 (430)
T ss_dssp HHHTTCEEECSCEEEEEC--SS----E---EEEECTTSCEEEE-----ECSEEEEECEEEC-CHHHHTTCT
T ss_pred HHhCCeEEEeCceEEEEe--CC----c---eEEEeeCCCceEe-----ecceEEEeccCCC-chHHHhccc
Confidence 466899999999999973 32 2 4556667766666 3689999998544 467777754
No 248
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=94.54 E-value=0.097 Score=55.64 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.++|||+|..|+-+|..|++ |.+|.|+|+..
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 218 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIGLDTTVMMRSI 218 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEcCc
Confidence 59999999999999999999 99999999753
No 249
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=94.49 E-value=0.1 Score=55.42 Aligned_cols=56 Identities=20% Similarity=0.267 Sum_probs=38.9
Q ss_pred CCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCC-CCeEEEEeecCCCceEEecCCCcCChHHH
Q 007210 256 NPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDEN-GNQHQAFLAGNPKSEVILSCGAIGTPQML 320 (612)
Q Consensus 256 ~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~-g~~~~v~~~~~a~k~VILaaG~~~sp~lL 320 (612)
++.|++|++++.|++|..++++ ++ .|.+.+.. |+...+. .+.||+|+|--.+..+|
T Consensus 238 ~~~Gv~i~~~~~v~~i~~~~~~---~~-~v~~~~~~~~~~~~~~-----~D~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 238 EERGIPFLRKTVPLSVEKQDDG---KL-LVKYKNVETGEESEDV-----YDTVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHTTCCEEETEEEEEEEECTTS---CE-EEEEEETTTCCEEEEE-----ESEEEECSCEEECCGGG
T ss_pred HhCCCEEEeCCEEEEEEEcCCC---cE-EEEEecCCCCceeEEE-----cCEEEECcccccCcCcC
Confidence 4468999999999999876542 33 47776543 4444553 58999999976655555
No 250
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.45 E-value=0.032 Score=58.90 Aligned_cols=32 Identities=22% Similarity=0.386 Sum_probs=29.5
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~ 203 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK 203 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC
Confidence 479999999999999999999 99999999986
No 251
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.43 E-value=0.09 Score=55.96 Aligned_cols=31 Identities=29% Similarity=0.446 Sum_probs=27.1
Q ss_pred cEEEECCCCchHHHHHhhhc-----cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-----NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-----g~~VlvLEkG~ 112 (612)
.++|||+|..|+-+|..|++ |.+|.++|+.+
T Consensus 182 ~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 182 SITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 69999999999999999876 46899999875
No 252
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=94.26 E-value=0.06 Score=58.76 Aligned_cols=31 Identities=29% Similarity=0.516 Sum_probs=29.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 189 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~ 220 (588)
T 3ics_A 189 HATVIGGGFIGVEMVENLRERGIEVTLVEMAN 220 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 69999999999999999999 99999999886
No 253
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=94.20 E-value=0.069 Score=56.90 Aligned_cols=57 Identities=23% Similarity=0.375 Sum_probs=38.2
Q ss_pred CCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChH-H-HHHcCC
Q 007210 256 NPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQ-M-LKLSGV 325 (612)
Q Consensus 256 ~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~-l-Ll~SGI 325 (612)
++.|++|+++++|++|..+++ ....|++ .+|+. + .++.||+|+|.--+.. | |..+|+
T Consensus 246 ~~~GV~i~~~~~v~~i~~~~~----~~~~v~~--~~G~~--i-----~~D~vv~a~G~~p~~~~L~l~~~gl 304 (495)
T 2wpf_A 246 TANGIEIMTNENPAKVSLNTD----GSKHVTF--ESGKT--L-----DVDVVMMAIGRIPRTNDLQLGNVGV 304 (495)
T ss_dssp HHTTCEEEESCCEEEEEECTT----SCEEEEE--TTSCE--E-----EESEEEECSCEEECCGGGTGGGTTC
T ss_pred HhCCCEEEeCCEEEEEEEcCC----ceEEEEE--CCCcE--E-----EcCEEEECCCCcccccccchhhcCc
Confidence 456999999999999987643 2344554 36653 3 2489999999766554 3 344444
No 254
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.16 E-value=0.14 Score=53.75 Aligned_cols=32 Identities=25% Similarity=0.249 Sum_probs=29.9
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.++|+++
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~ 180 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE 180 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC
Confidence 369999999999999999999 99999999986
No 255
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=94.15 E-value=0.18 Score=52.92 Aligned_cols=51 Identities=16% Similarity=0.185 Sum_probs=37.7
Q ss_pred CCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeC-CCCeEEEEeecCCCceEEecCCCcCC
Q 007210 256 NPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDE-NGNQHQAFLAGNPKSEVILSCGAIGT 316 (612)
Q Consensus 256 ~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~-~g~~~~v~~~~~a~k~VILaaG~~~s 316 (612)
...|++|++++.|+++..+++ . ..|.+.+. +|+..++. .+.||+|+|.-.+
T Consensus 327 ~~~~v~i~~~~~v~~v~~~~~----~-~~v~~~~~~~g~~~~~~-----~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 327 GIPRHAFRCMTTVERATATAQ----G-IELALRDAGSGELSVET-----YDAVILATGYERQ 378 (463)
T ss_dssp CCCCSEEETTEEEEEEEEETT----E-EEEEEEETTTCCEEEEE-----ESEEEECCCEECC
T ss_pred CCCCeEEEeCCEEEEEEecCC----E-EEEEEEEcCCCCeEEEE-----CCEEEEeeCCCCC
Confidence 447999999999999987653 3 44666544 56665553 5999999997666
No 256
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.04 E-value=0.068 Score=56.90 Aligned_cols=32 Identities=28% Similarity=0.308 Sum_probs=27.7
Q ss_pred ccEEEECCCCchHHHHHhhhc----cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ----NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae----g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~ 223 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD 223 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC
Confidence 378999999999999988876 67999999886
No 257
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=93.37 E-value=0.22 Score=58.07 Aligned_cols=31 Identities=29% Similarity=0.407 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
.|||||+|..|+-+|..|.+ |. +|.|+|+.+
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999999999999999999 86 899999875
No 258
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=93.18 E-value=0.2 Score=57.89 Aligned_cols=31 Identities=13% Similarity=0.134 Sum_probs=29.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.++|||+|..|+-+|..|++ |.+|.|+|+.+
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 69999999999999999999 99999999986
No 259
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=93.03 E-value=0.1 Score=55.57 Aligned_cols=51 Identities=24% Similarity=0.371 Sum_probs=33.5
Q ss_pred CCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCe--EEEEeecCCCceEEecCCCcCChH
Q 007210 256 NPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQ--HQAFLAGNPKSEVILSCGAIGTPQ 318 (612)
Q Consensus 256 ~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~--~~v~~~~~a~k~VILaaG~~~sp~ 318 (612)
++.|++|++++.|+++. .+ .++ +.....+|+. .++ .++.||.|+|--.+|.
T Consensus 283 ~~~GV~v~~~~~v~~v~--~~----~~~-~~~~~~dg~~~~~~i-----~ad~viwa~Gv~~~~~ 335 (502)
T 4g6h_A 283 ENTSIKVHLRTAVAKVE--EK----QLL-AKTKHEDGKITEETI-----PYGTLIWATGNKARPV 335 (502)
T ss_dssp HHTTCEEETTEEEEEEC--SS----EEE-EEEECTTSCEEEEEE-----ECSEEEECCCEECCHH
T ss_pred HhcceeeecCceEEEEe--CC----ceE-EEEEecCcccceeee-----ccCEEEEccCCcCCHH
Confidence 45799999999999984 22 222 2223346653 334 4689999999766653
No 260
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=91.88 E-value=0.46 Score=50.97 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
.++|||+|..|+-.|..++. |.+|.|+++.
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~ 255 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGYDVTVAVRS 255 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEeccc
Confidence 69999999999999999999 9999999874
No 261
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=91.20 E-value=0.11 Score=54.45 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=32.0
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
...+++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 183 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDR 183 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcc
Confidence 35689999999999999999999 999999999874
No 262
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=90.01 E-value=0.18 Score=49.83 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=30.5
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 69999999999999999999 9999999998743
No 263
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=89.87 E-value=0.17 Score=43.55 Aligned_cols=32 Identities=22% Similarity=0.389 Sum_probs=29.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
=.|+|||.|.-|..+|..|.+ |.+|+++|+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 359999999999999999999 99999999875
No 264
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=89.66 E-value=0.17 Score=51.81 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=30.8
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
.|+|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 69999999999999999999 9999999998754
No 265
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=89.42 E-value=0.19 Score=43.11 Aligned_cols=31 Identities=32% Similarity=0.579 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-++|+|+|.-|..+|..|.+ |.+|+++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 59999999999999999999 99999999854
No 266
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.40 E-value=0.65 Score=51.56 Aligned_cols=31 Identities=23% Similarity=0.295 Sum_probs=28.8
Q ss_pred cEEEEC--CCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVG--GGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVG--sG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.|+||| +|..|+-+|..|++ |.+|.++|+.+
T Consensus 525 ~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 525 KVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp EEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 599999 89999999999999 99999999876
No 267
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.28 E-value=0.21 Score=43.79 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=29.3
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.|+|||+|.-|..+|..|.+ |.+|+++++.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999 99999999865
No 268
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=88.81 E-value=0.22 Score=52.39 Aligned_cols=34 Identities=26% Similarity=0.341 Sum_probs=31.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 206 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERI 206 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcc
Confidence 379999999999999999999 9999999998743
No 269
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=88.78 E-value=0.24 Score=42.12 Aligned_cols=31 Identities=29% Similarity=0.487 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.++|||+|.-|..+|..|.+ |.+|.++++.+
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 58999999999999999999 99999999853
No 270
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=88.04 E-value=0.29 Score=48.14 Aligned_cols=33 Identities=33% Similarity=0.450 Sum_probs=30.3
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 369999999999999999999 999999998763
No 271
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=87.86 E-value=0.27 Score=42.83 Aligned_cols=30 Identities=20% Similarity=0.231 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
-++|+|+|..|..+|..|.+ |.+|+++|+.
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 48999999999999999999 9999999985
No 272
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=87.38 E-value=0.26 Score=50.08 Aligned_cols=33 Identities=36% Similarity=0.689 Sum_probs=30.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 369999999999999999999 999999999874
No 273
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=87.27 E-value=0.65 Score=46.96 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=30.2
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
.+.-|||+|+|.+|..+|.-|.. |. +|.++++-+
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34579999999999999999998 97 999999975
No 274
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=85.48 E-value=0.41 Score=40.74 Aligned_cols=31 Identities=23% Similarity=0.418 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.++|+|+|..|..+|..|.+ |.+|+++++.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 49999999999999999999 99999999753
No 275
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=85.43 E-value=0.43 Score=39.00 Aligned_cols=31 Identities=29% Similarity=0.448 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHHhhhc-c-CeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-N-FTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG~ 112 (612)
.++|+|+|..|..+|..|.+ | .+|.++++.+
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 59999999999999999999 8 8999999854
No 276
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=85.15 E-value=0.49 Score=48.77 Aligned_cols=34 Identities=35% Similarity=0.428 Sum_probs=31.0
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 180 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRL 180 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcc
Confidence 479999999999999999999 9999999998743
No 277
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=83.96 E-value=0.67 Score=48.68 Aligned_cols=31 Identities=10% Similarity=0.079 Sum_probs=29.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.|+|||+|..|+=+|..|++ |.+|.|+++.+
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 69999999999999999999 99999999875
No 278
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=83.70 E-value=0.52 Score=47.53 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
.|+|||+|..|+-+|..|++ |.+|.++|+++.
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 69999999999999999999 999999999863
No 279
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=83.46 E-value=0.61 Score=48.69 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=29.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCe-eeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFT-VLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~-VlvLEkG~ 112 (612)
.|+|||+|..|+=+|..|++ +.+ |.|+++++
T Consensus 214 ~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 214 SVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred EEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 69999999999999999999 888 99999986
No 280
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=83.44 E-value=1.2 Score=46.44 Aligned_cols=33 Identities=21% Similarity=0.318 Sum_probs=31.0
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
.++|||+|..|+-+|..+++ |.+|.|+|+++..
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 69999999999999999999 9999999999754
No 281
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=82.42 E-value=0.85 Score=47.71 Aligned_cols=60 Identities=13% Similarity=0.098 Sum_probs=42.6
Q ss_pred CCCceecHHHhhhhcCCCCcEEEeccEEEEEEec--CCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCc
Q 007210 241 RFGRRHTAAELLASANPQKITVLIRATVQKIVFD--TSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAI 314 (612)
Q Consensus 241 ~~g~r~~~~~~l~~a~~~g~~v~~~~~V~~l~~~--~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~ 314 (612)
..|.......+...+++.|.+|+++++|++|..+ ++ ++++|.. +|+. + .++.||+|+|.+
T Consensus 238 ~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~----~~~~V~~---~g~~--~-----~ad~VV~a~~~~ 299 (453)
T 2bcg_G 238 MYGLGELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTG----KFEGVKT---KLGT--F-----KAPLVIADPTYF 299 (453)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEEETTTT----EEEEEEE---TTEE--E-----ECSCEEECGGGC
T ss_pred CCCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCC----eEEEEEE---CCeE--E-----ECCEEEECCCcc
Confidence 4444333334555566679999999999999987 44 8888875 3533 3 358899999976
No 282
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=81.98 E-value=0.78 Score=47.89 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=30.7
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 79999999999999999999 9999999998743
No 283
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=81.77 E-value=0.8 Score=49.20 Aligned_cols=33 Identities=15% Similarity=0.241 Sum_probs=30.9
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+.
T Consensus 186 krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 186 KRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 369999999999999999999 999999999985
No 284
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=81.51 E-value=0.81 Score=47.16 Aligned_cols=34 Identities=35% Similarity=0.665 Sum_probs=31.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 178 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDEL 178 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcc
Confidence 369999999999999999999 9999999998744
No 285
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=81.25 E-value=0.63 Score=43.24 Aligned_cols=30 Identities=23% Similarity=0.534 Sum_probs=28.2
Q ss_pred EEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
|+|||+|.-|..+|..|.+ |.+|+++|+.+
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 8999999999999999999 99999999864
No 286
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=81.25 E-value=0.86 Score=48.91 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=30.9
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 369999999999999999999 999999999985
No 287
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=80.96 E-value=1.7 Score=43.90 Aligned_cols=33 Identities=27% Similarity=0.440 Sum_probs=29.7
Q ss_pred cccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
+.-|||+|+|.+|..+|..|.. |. +|.|+++-+
T Consensus 192 ~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 192 EVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 4579999999999999999999 87 899999974
No 288
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=80.63 E-value=0.88 Score=48.94 Aligned_cols=33 Identities=15% Similarity=0.286 Sum_probs=30.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
-.|+|||+|..|+-+|..|++ +.+|.|+++.+.
T Consensus 192 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 192 KRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 369999999999999999999 999999999985
No 289
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=79.90 E-value=1.1 Score=44.59 Aligned_cols=32 Identities=31% Similarity=0.441 Sum_probs=29.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ |.+|.++++.+
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~ 188 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD 188 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC
Confidence 469999999999999999999 99999999886
No 290
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=79.82 E-value=0.99 Score=47.37 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=30.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 211 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLF 211 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc
Confidence 369999999999999999999 9999999998743
No 291
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=79.51 E-value=1.3 Score=43.75 Aligned_cols=31 Identities=29% Similarity=0.346 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.+.|||+|.-|...|..|++ |.+|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 48999999999999999999 99999999863
No 292
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=78.22 E-value=1.3 Score=45.73 Aligned_cols=34 Identities=35% Similarity=0.422 Sum_probs=31.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
-.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 153 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 187 (415)
T 3lxd_A 153 KNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRV 187 (415)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCch
Confidence 368999999999999999999 9999999999754
No 293
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=77.95 E-value=0.93 Score=43.72 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
--|+|||+|-.|...|..|.+ |++|.|++...
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 359999999999999999999 99999998643
No 294
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=77.89 E-value=1.2 Score=45.62 Aligned_cols=33 Identities=27% Similarity=0.342 Sum_probs=30.6
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
.++|||+|..|+-+|..|++ |.+|.++|+.+..
T Consensus 144 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~ 177 (404)
T 3fg2_P 144 HVVVIGAGFIGLEFAATARAKGLEVDVVELAPRV 177 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 59999999999999999999 9999999998754
No 295
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=77.89 E-value=1.3 Score=43.62 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.2
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
.++|||+|..|+-+|..|++ |.+|.++++.+..
T Consensus 157 ~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~ 190 (319)
T 3cty_A 157 RVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKY 190 (319)
T ss_dssp EEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSC
T ss_pred eEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCcc
Confidence 69999999999999999999 9999999998643
No 296
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=77.72 E-value=1.4 Score=43.57 Aligned_cols=34 Identities=29% Similarity=0.449 Sum_probs=31.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
-.++|||+|..|+-+|..|++ |.+|.++++.+..
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~ 208 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHL 208 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcc
Confidence 469999999999999999999 9999999998754
No 297
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=77.64 E-value=1.3 Score=41.30 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=28.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
--|+|||+|-.|...|..|.+ |.+|.|+..-
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 469999999999999999999 9999999853
No 298
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=77.39 E-value=1.2 Score=44.00 Aligned_cols=31 Identities=26% Similarity=0.473 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.|.|||+|.-|...|..|++ |.+|.++.+..
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 48999999999999999999 99999999864
No 299
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=77.37 E-value=0.92 Score=47.14 Aligned_cols=61 Identities=18% Similarity=0.217 Sum_probs=42.5
Q ss_pred CCCCceecHHHhhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCc
Q 007210 240 DRFGRRHTAAELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAI 314 (612)
Q Consensus 240 ~~~g~r~~~~~~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~ 314 (612)
+..|.......+...+++.|++|+++++|++|..+++ ++++|.. +|+. + .++.||+|+|..
T Consensus 229 p~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~----~v~~v~~---~g~~--~-----~ad~VV~a~~~~ 289 (433)
T 1d5t_A 229 PLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIMENG----KVVGVKS---EGEV--A-----RCKQLICDPSYV 289 (433)
T ss_dssp ETTCTTHHHHHHHHHHHHHTCCCBCSCCCCEEEEETT----EEEEEEE---TTEE--E-----ECSEEEECGGGC
T ss_pred eCcCHHHHHHHHHHHHHHcCCEEECCCEEEEEEEeCC----EEEEEEE---CCeE--E-----ECCEEEECCCCC
Confidence 3445333233354555567999999999999998765 8888873 4543 3 358999999876
No 300
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=77.35 E-value=1.3 Score=46.46 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=30.9
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+++..
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 207 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRA 207 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcC
Confidence 369999999999999999999 9999999998743
No 301
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=77.29 E-value=1.1 Score=48.61 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
.++|||+|..|+-+|..|++ |.+|.|+|+.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 69999999999999999999 9999999987
No 302
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=76.58 E-value=1.1 Score=46.90 Aligned_cols=31 Identities=29% Similarity=0.595 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-+||+|+|--|..+|..|.+ |++|+|+|+.+
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 39999999999999999998 99999999875
No 303
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=76.15 E-value=2.3 Score=43.62 Aligned_cols=33 Identities=9% Similarity=0.349 Sum_probs=28.7
Q ss_pred cccEEEECCCCchHHHHHhhhc-cC---eeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NF---TVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~---~VlvLEkG~ 112 (612)
+--|||.|+|.||+.+|..|.+ |. +|.++++-+
T Consensus 219 d~riV~~GAGaAGigia~ll~~~G~~~~~i~l~D~~G 255 (487)
T 3nv9_A 219 ECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKG 255 (487)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEETTE
T ss_pred hcEEEEECCCHHHHHHHHHHHHcCCCcccEEEEeccc
Confidence 4569999999999999999988 86 799999875
No 304
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=76.04 E-value=2.1 Score=41.30 Aligned_cols=31 Identities=13% Similarity=0.056 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.++|||+|..|+-+|..|++ | +|.++++++
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 479999999999999999999 9 999999875
No 305
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=75.90 E-value=1.4 Score=41.90 Aligned_cols=33 Identities=24% Similarity=0.413 Sum_probs=29.3
Q ss_pred cccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
...|+|||+|..|+.+|..|+. |. +|.|++...
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3579999999999999999999 85 899999864
No 306
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=75.60 E-value=1.5 Score=39.20 Aligned_cols=31 Identities=19% Similarity=0.193 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHHhhhc--cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ--NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~ 112 (612)
.|+|||.|.-|..+|..|.+ |.+|+++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 59999999999999999986 78999999864
No 307
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=75.35 E-value=2.8 Score=45.57 Aligned_cols=61 Identities=18% Similarity=0.150 Sum_probs=42.7
Q ss_pred CCCCceecHHHhhhhcCCCCcEEEeccEEEEEEecCC-CCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCC
Q 007210 240 DRFGRRHTAAELLASANPQKITVLIRATVQKIVFDTS-GKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCG 312 (612)
Q Consensus 240 ~~~g~r~~~~~~l~~a~~~g~~v~~~~~V~~l~~~~~-g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG 312 (612)
+..|....+..|...+...|.+|+++++|++|+++++ + +|+||.. .+|+. + .++.||..+.
T Consensus 373 p~GG~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g---~v~gV~~--~~Ge~--i-----~A~~VVs~~~ 434 (650)
T 1vg0_A 373 PLYGQGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESR---KCKAVID--QFGQR--I-----ISKHFIIEDS 434 (650)
T ss_dssp ETTCTTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTC---CEEEEEE--TTSCE--E-----ECSEEEEEGG
T ss_pred eCCchhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCC---eEEEEEe--CCCCE--E-----EcCEEEEChh
Confidence 3455443344455666778999999999999998863 3 8999883 46764 3 2578887554
No 308
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=75.22 E-value=1.4 Score=43.60 Aligned_cols=31 Identities=29% Similarity=0.469 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||+|.-|.-.|..++. |++|+|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 48999999999999999999 99999999754
No 309
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=74.69 E-value=1.5 Score=42.84 Aligned_cols=31 Identities=26% Similarity=0.372 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.+.|||+|.-|...|..|++ |.+|.++.+..
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 48999999999999999999 99999999874
No 310
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=74.21 E-value=1.3 Score=37.98 Aligned_cols=31 Identities=23% Similarity=0.369 Sum_probs=27.8
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-+.|||+|..|..+|..|.+ |.+|.+.++.+
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 48999999999999999998 88899998764
No 311
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=73.38 E-value=1.7 Score=42.09 Aligned_cols=31 Identities=23% Similarity=0.342 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||+|.-|...|..|++ |++|++.++.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 48999999999999999999 99999998764
No 312
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=73.35 E-value=1.9 Score=45.99 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=31.2
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
-.++|||+|..|+-+|..|++ |.+|.|+|+.+..
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcc
Confidence 479999999999999999999 9999999998754
No 313
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=73.29 E-value=1.7 Score=42.51 Aligned_cols=31 Identities=29% Similarity=0.531 Sum_probs=28.5
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||+|.-|...|..|++ |++|.++++.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 39999999999999999999 99999999864
No 314
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=73.01 E-value=2.1 Score=41.88 Aligned_cols=35 Identities=29% Similarity=0.266 Sum_probs=31.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVPF 115 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~~ 115 (612)
-.++|||+|..|+-+|..|++ |.+|.++++++...
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~ 190 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK 190 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC
Confidence 469999999999999999999 99999999987543
No 315
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=72.91 E-value=2.6 Score=43.92 Aligned_cols=31 Identities=19% Similarity=0.198 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||.|.+|+.+|..|.+ |++|.+.|+..
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 58999999999999999999 99999999875
No 316
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=72.86 E-value=1.8 Score=44.65 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=29.2
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.|||||.|--|..+|..|.+ |.+|+|||+.+
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 59999999999999999999 99999999875
No 317
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=72.66 E-value=2.4 Score=42.14 Aligned_cols=35 Identities=23% Similarity=0.509 Sum_probs=30.2
Q ss_pred cccEEEECCCCchHHHHHhhhc-c-CeeeEeecCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-N-FTVLLLERGGVP 114 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG~~~ 114 (612)
..-|+|||+|..|+.+|..|+. | .++.|++.....
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~Ve 70 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 70 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEec
Confidence 4579999999999999999999 8 489999887543
No 318
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=72.44 E-value=1.8 Score=43.23 Aligned_cols=30 Identities=33% Similarity=0.499 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
-|.|||+|.-|...|..|++ |.+|.++.+.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 48999999999999999999 9999999874
No 319
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=72.38 E-value=2.1 Score=39.32 Aligned_cols=32 Identities=13% Similarity=0.275 Sum_probs=29.0
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
..+.|||+|.-|...|..|++ |.+|.++++.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999999 99999998764
No 320
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=72.27 E-value=2.1 Score=41.41 Aligned_cols=30 Identities=23% Similarity=0.171 Sum_probs=28.0
Q ss_pred EEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+.|||+|.-|...|..|++ |.+|.++.+.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 7899999999999999999 99999998865
No 321
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=72.26 E-value=2 Score=43.74 Aligned_cols=32 Identities=25% Similarity=0.236 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
--|+|+|+|..|..+|..|.. |.+|+++++-+
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999999999999999988 99999999875
No 322
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=71.51 E-value=2.1 Score=41.29 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=27.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
-++|+|+|..|..+|..|++ |.+|.|..|-
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 59999999999999999999 9999998765
No 323
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=71.44 E-value=2 Score=45.77 Aligned_cols=30 Identities=23% Similarity=0.313 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
.++|||+|..|+-+|..|++ |.+|.|+|+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~ 242 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRS 242 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEecc
Confidence 59999999999999999999 9999999985
No 324
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=70.67 E-value=2.1 Score=42.16 Aligned_cols=31 Identities=26% Similarity=0.450 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cC--eeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF--TVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG~ 112 (612)
-|.|||+|.-|..+|..|++ |. +|.++++..
T Consensus 9 kI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 9 KLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 59999999999999999999 87 999999863
No 325
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=70.47 E-value=2.1 Score=45.00 Aligned_cols=33 Identities=21% Similarity=0.446 Sum_probs=29.8
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
..-+.|||.|.-|+..|..|++ |.+|+++++.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4579999999999999999999 99999998754
No 326
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=70.42 E-value=2.2 Score=44.61 Aligned_cols=31 Identities=32% Similarity=0.303 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-++|+|+|..|..+|.+|+. |.+|++.|+.+
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 48999999999999999999 99999998753
No 327
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=70.18 E-value=2.2 Score=43.10 Aligned_cols=32 Identities=22% Similarity=0.155 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
--|+|||+|..|..+|..|.. |.+|+++++-+
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999988 99999999875
No 328
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=69.97 E-value=2.9 Score=43.34 Aligned_cols=30 Identities=23% Similarity=0.282 Sum_probs=27.7
Q ss_pred EEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+.|||.|.-|+..|..|++ |.+|+++++.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999999 99999998754
No 329
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=69.64 E-value=2.7 Score=40.82 Aligned_cols=34 Identities=24% Similarity=0.274 Sum_probs=31.0
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
-.++|||+|..|+-+|..|++ +.+|.++++.+..
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~ 182 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEF 182 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSC
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCC
Confidence 369999999999999999999 9999999998754
No 330
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=69.53 E-value=2.3 Score=41.56 Aligned_cols=31 Identities=26% Similarity=0.388 Sum_probs=28.2
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||+|.-|...|..|++ |.+|.++++.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 48999999999999999999 99999998753
No 331
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=69.38 E-value=2.5 Score=42.66 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
--|+|+|+|..|..+|..|.. |.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 369999999999999999988 99999998864
No 332
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=69.11 E-value=2.7 Score=41.70 Aligned_cols=31 Identities=19% Similarity=0.446 Sum_probs=28.2
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.|+|||+|..|+-+|..|++ + +|.++++.+
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 479999999999999999999 7 799999874
No 333
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=68.75 E-value=3.6 Score=39.08 Aligned_cols=33 Identities=24% Similarity=0.406 Sum_probs=28.8
Q ss_pred cccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
..-|+|||+|..|+.+|..|+. |. ++.|++...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3579999999999999999999 85 888888764
No 334
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=68.71 E-value=2.5 Score=41.79 Aligned_cols=29 Identities=24% Similarity=0.590 Sum_probs=26.7
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
.+.|||+|.-|...|..|++ |.+|.++ +-
T Consensus 21 kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 21 KVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred cEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 58999999999999999999 9999998 53
No 335
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=68.48 E-value=2.6 Score=42.59 Aligned_cols=31 Identities=26% Similarity=0.405 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|+|+|+|..|..+|..|.. |.+|+++++.+
T Consensus 168 ~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 168 SVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999998 99999998754
No 336
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=68.43 E-value=2.5 Score=44.21 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=28.7
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
-.|+|||+|..|+=+|..|.+ |. +|.++++.+
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 369999999999999999988 86 699999876
No 337
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=68.41 E-value=2.5 Score=43.27 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
--|+|+|+|..|+.+|..|.. |.+|+++++-+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 369999999999999999988 99999998764
No 338
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=68.30 E-value=2 Score=40.15 Aligned_cols=30 Identities=13% Similarity=0.162 Sum_probs=27.8
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.+||+|+|.-|..+|..|.+ |. |+++|+.+
T Consensus 11 ~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 11 HVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp EEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred EEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 59999999999999999999 99 99999865
No 339
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=67.65 E-value=1.8 Score=45.27 Aligned_cols=65 Identities=15% Similarity=0.090 Sum_probs=41.2
Q ss_pred CCCceecHHHhhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHH
Q 007210 241 RFGRRHTAAELLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQM 319 (612)
Q Consensus 241 ~~g~r~~~~~~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~l 319 (612)
..|.......+...+.+.|++|+++++|++|..+++ ++..|.. ++.. +. ++.||+|++.....+|
T Consensus 230 ~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~----~~~~v~~---~~~~--~~-----ad~vv~a~p~~~~~~l 294 (477)
T 3nks_A 230 RGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAE----GRWKVSL---RDSS--LE-----ADHVISAIPASVLSEL 294 (477)
T ss_dssp TTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGG----GCEEEEC---SSCE--EE-----ESEEEECSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCC----ceEEEEE---CCeE--EE-----cCEEEECCCHHHHHHh
Confidence 344333333344555567999999999999988764 3334532 3433 32 4899999987555544
No 340
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=67.64 E-value=2.1 Score=44.44 Aligned_cols=32 Identities=13% Similarity=0.225 Sum_probs=28.8
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
-|.|||.|.+|+.+|..|++ |++|.+.|....
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 38999999999999999988 999999998653
No 341
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=67.26 E-value=3.1 Score=43.54 Aligned_cols=54 Identities=19% Similarity=0.273 Sum_probs=37.4
Q ss_pred CCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeC-------------CCCeEEEEeecCCCceEEecCCCcCCh
Q 007210 257 PQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDE-------------NGNQHQAFLAGNPKSEVILSCGAIGTP 317 (612)
Q Consensus 257 ~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~-------------~g~~~~v~~~~~a~k~VILaaG~~~sp 317 (612)
+.|++|++++.+++|.-++++ .++.+|++.+. +|+..++ .+..||+|+|.-.++
T Consensus 269 ~~gv~~~~~~~~~~i~~~~~~--~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i-----~~d~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPSPDG--RRAAGIRLAVTRLEGIGEATRAVPTGDVEDL-----PCGLVLSSIGYKSRP 335 (460)
T ss_dssp SEEEEEECSEEEEEEEECTTS--SSEEEEEEEEEEEESSGGGCEEEEEEEEEEE-----ECSEEEECCCEECCC
T ss_pred CceEEEECCCChheEEcCCCC--ceEEEEEEEEEEEccccCCCcccCCCceEEE-----EcCEEEECCCCCCCC
Confidence 478999999999999765321 16777877531 2433444 468999999977666
No 342
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=67.12 E-value=6.5 Score=34.64 Aligned_cols=55 Identities=18% Similarity=0.119 Sum_probs=36.8
Q ss_pred hhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCC
Q 007210 253 ASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGV 325 (612)
Q Consensus 253 ~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGI 325 (612)
..+++.|++++++ +|+++..+++ . +.+...+| ++. ++.||+|+|.. |.++...|+
T Consensus 64 ~~~~~~gv~v~~~-~v~~i~~~~~----~---~~v~~~~g---~i~-----ad~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 64 AHARRYGAEVRPG-VVKGVRDMGG----V---FEVETEEG---VEK-----AERLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHTTCEEEEC-CCCEEEECSS----S---EEEECSSC---EEE-----EEEEEECCTTC--CHHHHHHTC
T ss_pred HHHHHcCCEEEeC-EEEEEEEcCC----E---EEEEECCC---EEE-----ECEEEECCCCC--CCccccCCC
Confidence 3455679999999 9999987654 2 22333355 333 48999999975 455555554
No 343
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=66.81 E-value=3.4 Score=37.81 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=27.4
Q ss_pred EEEEC-CCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVG-GGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVG-sG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+.||| +|..|...|..|++ |.+|.++++.+
T Consensus 3 i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 3 VALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 78999 99999999999999 99999998753
No 344
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=66.45 E-value=3.1 Score=39.93 Aligned_cols=32 Identities=25% Similarity=0.471 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
--++|+|+|.+|..+|..|++ |.+|.|.-|-.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999 99999998765
No 345
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=66.34 E-value=3 Score=41.33 Aligned_cols=28 Identities=21% Similarity=0.374 Sum_probs=26.7
Q ss_pred EEEECCCCchHHHHHhhhc-cCeeeEeec
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NFTVLLLER 110 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~~VlvLEk 110 (612)
+.|||+|.-|...|..|++ |.+|.++++
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 7899999999999999999 999999987
No 346
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=66.19 E-value=3.8 Score=40.37 Aligned_cols=32 Identities=25% Similarity=0.438 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
.-|.|||+|.-|..+|..|++ |. +|.++++.+
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 358999999999999999999 87 999999864
No 347
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=65.99 E-value=3.1 Score=40.42 Aligned_cols=34 Identities=26% Similarity=0.393 Sum_probs=29.9
Q ss_pred CcccEEEECCCCchHHHHHhhhc-c-CeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-N-FTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG~ 112 (612)
...-|+|||+|..|+.+|..|+. | .++.|++...
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 45789999999999999999999 8 5899998754
No 348
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=65.95 E-value=3 Score=43.15 Aligned_cols=33 Identities=18% Similarity=0.144 Sum_probs=29.7
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-..+.|||.|.-|++.|..||+ |++|+.++..+
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 3579999999999999999999 99999998754
No 349
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=65.92 E-value=3.1 Score=41.37 Aligned_cols=32 Identities=16% Similarity=0.242 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
.-|.|||+|.-|..+|..|+. |+ +|.|++.-.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 469999999999999999999 87 999999864
No 350
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=65.90 E-value=3.2 Score=42.19 Aligned_cols=32 Identities=25% Similarity=0.263 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.|+|+|+|..|..+|..|.. |.+|++.++-+
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999888 99999999765
No 351
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=65.51 E-value=3.1 Score=43.35 Aligned_cols=31 Identities=26% Similarity=0.304 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.+.|||.|.-|+..|..|++ |.+|+++++.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 48999999999999999999 99999999864
No 352
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=65.51 E-value=3.4 Score=46.03 Aligned_cols=31 Identities=13% Similarity=0.108 Sum_probs=29.2
Q ss_pred cEEEEC--CCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVG--GGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVG--sG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.|+||| +|..|+-+|..|++ |.+|.|+|+++
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 699998 89999999999999 99999999986
No 353
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=65.42 E-value=3.3 Score=42.00 Aligned_cols=32 Identities=34% Similarity=0.398 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
--|+|||+|..|..+|..|.. |.+|+++++.+
T Consensus 169 ~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 169 ADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 359999999999999999988 99999998754
No 354
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=65.29 E-value=8.2 Score=40.43 Aligned_cols=60 Identities=15% Similarity=0.174 Sum_probs=38.1
Q ss_pred CCCceecHHHhhhhcCCCC-cEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCc
Q 007210 241 RFGRRHTAAELLASANPQK-ITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAI 314 (612)
Q Consensus 241 ~~g~r~~~~~~l~~a~~~g-~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~ 314 (612)
.+|.......+...+.+.| ++|+++++|++|..+++ .+ .|.+ .+|+. +. ++.||+|+|.-
T Consensus 251 ~gG~~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~----~v-~v~~--~~g~~--~~-----ad~vI~a~~~~ 311 (495)
T 2vvm_A 251 KDGQSAFARRFWEEAAGTGRLGYVFGCPVRSVVNERD----AA-RVTA--RDGRE--FV-----AKRVVCTIPLN 311 (495)
T ss_dssp TTCHHHHHHHHHHHHHTTTCEEEESSCCEEEEEECSS----SE-EEEE--TTCCE--EE-----EEEEEECCCGG
T ss_pred CCCHHHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCC----EE-EEEE--CCCCE--EE-----cCEEEECCCHH
Confidence 3443332333445555566 99999999999987654 33 2433 46653 32 48999999953
No 355
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=64.86 E-value=4.8 Score=38.88 Aligned_cols=32 Identities=19% Similarity=0.237 Sum_probs=28.0
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
-.++|+|+|.+|..+|..|.+ |. +|.|+-|-.
T Consensus 123 k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 123 NICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp SEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 469999999999999999999 87 899987753
No 356
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=64.78 E-value=3.4 Score=40.52 Aligned_cols=30 Identities=30% Similarity=0.362 Sum_probs=27.3
Q ss_pred EEEECCCCchHHHHHhhhc-cC--eeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NF--TVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG~ 112 (612)
|.|||+|..|..+|..|+. |. .|.+++...
T Consensus 3 I~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 3 VGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 7899999999999999999 87 899999853
No 357
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=64.42 E-value=3.5 Score=41.26 Aligned_cols=31 Identities=32% Similarity=0.449 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.|.|||+|.-|...|..|++ |.+|.++++.+
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 59999999999999999999 99999998753
No 358
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=64.36 E-value=2.7 Score=40.51 Aligned_cols=31 Identities=23% Similarity=0.283 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-++|+|+|.+|..+|..|++ |.+|.|..|..
T Consensus 121 ~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 121 HVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp EEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999 99999998763
No 359
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=63.92 E-value=4.6 Score=43.20 Aligned_cols=34 Identities=24% Similarity=0.553 Sum_probs=29.4
Q ss_pred cccEEEECCCCchHHHHHhhhc-cC-eeeEeecCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGGV 113 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~~ 113 (612)
..-|+|||+|..|+.+|..|+. |. ++.|++....
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 362 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 3569999999999999999999 84 8999987653
No 360
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=63.58 E-value=3.8 Score=39.74 Aligned_cols=29 Identities=24% Similarity=0.517 Sum_probs=26.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
-++|+|+|..|..+|..|++ | +|.|..+-
T Consensus 130 ~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~ 159 (287)
T 1nvt_A 130 NIVIYGAGGAARAVAFELAKDN-NIIIANRT 159 (287)
T ss_dssp EEEEECCSHHHHHHHHHHTSSS-EEEEECSS
T ss_pred EEEEECchHHHHHHHHHHHHCC-CEEEEECC
Confidence 49999999999999999999 9 99998764
No 361
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=63.46 E-value=4 Score=39.88 Aligned_cols=31 Identities=16% Similarity=0.207 Sum_probs=27.6
Q ss_pred cEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
.++|+|+|.+|..+|..|++ |. +|.|..|-.
T Consensus 143 ~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 143 RILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred EEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 59999999999999999999 86 899987753
No 362
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=63.27 E-value=3.6 Score=40.67 Aligned_cols=31 Identities=29% Similarity=0.469 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||+|.-|...|..|++ |++|.+.++.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 48999999999999999999 99999998864
No 363
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=63.19 E-value=3.9 Score=37.66 Aligned_cols=31 Identities=26% Similarity=0.350 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-+.|||+|.-|...|..|++ |.+|.++++.+
T Consensus 30 ~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 30 KVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999 99999998753
No 364
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=63.07 E-value=4 Score=40.16 Aligned_cols=31 Identities=13% Similarity=0.284 Sum_probs=27.5
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERG 111 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG 111 (612)
--++|+|+|.+|.++|..|++ |. +|.|+-|-
T Consensus 155 k~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHHCCCCEEEEEECC
Confidence 358999999999999999999 97 89998776
No 365
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=63.03 E-value=3.8 Score=42.80 Aligned_cols=31 Identities=26% Similarity=0.373 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||+|.-|...|..|++ |++|+++++.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 49999999999999999999 99999998764
No 366
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=62.91 E-value=4 Score=39.57 Aligned_cols=30 Identities=30% Similarity=0.352 Sum_probs=27.2
Q ss_pred cEEEEC-CCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVG-GGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVG-sG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
-++|+| +|..|..+|..|++ |.+|.++.+.
T Consensus 121 ~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~ 152 (287)
T 1lu9_A 121 KAVVLAGTGPVGMRSAALLAGEGAEVVLCGRK 152 (287)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECC
Confidence 489999 89999999999999 9999998775
No 367
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=62.91 E-value=4.2 Score=37.78 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=28.0
Q ss_pred cEEEECC-CCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGG-GTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGs-G~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|+|.|+ |.-|..+|.+|.+ |++|.++-|.+
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4899998 9999999999999 99999998864
No 368
>1pj3_A NAD-dependent malic enzyme, mitochondrial; oxidative decarboxylase, oxidoreductase; HET: NAD; 2.10A {Homo sapiens} SCOP: c.2.1.7 c.58.1.3 PDB: 1pj2_A* 1do8_A* 1pj4_A* 1qr6_A* 1efl_A* 1pjl_A* 1efk_A* 1gz4_A* 1gz3_A*
Probab=62.84 E-value=5.6 Score=41.85 Aligned_cols=33 Identities=15% Similarity=0.368 Sum_probs=27.4
Q ss_pred cccEEEECCCCchHHHHHhhh-----cc-------CeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLS-----QN-------FTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~La-----eg-------~~VlvLEkG~ 112 (612)
+--|||.|+|.||+.+|..|. +| .+|.++++-+
T Consensus 284 d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~~D~~G 328 (564)
T 1pj3_A 284 EHKILFLGAGEAALGIANLIVMSMVENGLSEQEAQKKIWMFDKYG 328 (564)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHHHHTTCCHHHHHHTEEEEETTE
T ss_pred HcEEEEeCCCHHHHHHHHHHHHHHHHcCCChHHhhCcEEEEeCCC
Confidence 456999999999999998887 36 4789998875
No 369
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=62.51 E-value=4.4 Score=39.75 Aligned_cols=31 Identities=29% Similarity=0.366 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHHhhhccCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQNFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Laeg~~VlvLEkG~ 112 (612)
.+.|||+|.-|+..|..|+.|.+|.++.+.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~~g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLSLYHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhcCCceEEEECCH
Confidence 4899999999999999999778999999874
No 370
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=62.22 E-value=4.4 Score=43.49 Aligned_cols=35 Identities=23% Similarity=0.509 Sum_probs=30.2
Q ss_pred cccEEEECCCCchHHHHHhhhc-c-CeeeEeecCCCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-N-FTVLLLERGGVP 114 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG~~~ 114 (612)
..-|+|||+|..|+.+|..|+. | .++.|++.....
T Consensus 326 ~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~Ve 362 (615)
T 4gsl_A 326 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVS 362 (615)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCCc
Confidence 4579999999999999999999 8 489999987533
No 371
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=62.20 E-value=6 Score=41.76 Aligned_cols=52 Identities=21% Similarity=0.189 Sum_probs=38.1
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIG 315 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~ 315 (612)
+...+.+.|++++.+ +|++|..++++ ++++|... +|+ ++ .++.||.|+|...
T Consensus 179 L~~~a~~~gv~~~~~-~v~~i~~~~~~---~~~~v~~~--~g~--~~-----~ad~vV~A~G~~S 230 (511)
T 2weu_A 179 LSEYAIARGVRHVVD-DVQHVGQDERG---WISGVHTK--QHG--EI-----SGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHTTCEEEEC-CEEEEEECTTS---CEEEEEES--SSC--EE-----ECSEEEECCGGGC
T ss_pred HHHHHHHCCCEEEEC-eEeEEEEcCCC---CEEEEEEC--CCC--EE-----EcCEEEECCCcch
Confidence 344455679999999 99999886554 77788764 564 33 3699999999743
No 372
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=61.97 E-value=4.3 Score=38.59 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=26.7
Q ss_pred EEEECC-C-CchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGG-G-TAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGs-G-~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
++|.|+ | .-|..+|.+|++ |.+|+++.+..
T Consensus 25 vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 25 VLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp EEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 899998 7 599999999999 99999998753
No 373
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=61.93 E-value=4.3 Score=39.47 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-+.|||.|..|..+|.+|.. |.+|++.++-+
T Consensus 157 ~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 157 NVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999998 99999998754
No 374
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=61.88 E-value=4.1 Score=40.42 Aligned_cols=31 Identities=23% Similarity=0.443 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
-|.|||+|.-|..+|..|+. |. +|.+++.-.
T Consensus 16 kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 16 KISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 69999999999999999999 87 999999864
No 375
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=61.84 E-value=4.5 Score=42.30 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=30.6
Q ss_pred ccEEEECCCCchHHHHHhhhc--cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ--NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~~~ 114 (612)
-.++|||+|..|+-+|..|++ |.+|.++|+++..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~ 195 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQI 195 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcc
Confidence 479999999999999999988 8999999998754
No 376
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=61.78 E-value=4.1 Score=40.92 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=29.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.+.|||+|.-|.+.|..|++ |.+|.+..+.+
T Consensus 30 mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 30 HPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 369999999999999999999 99999998854
No 377
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=61.53 E-value=4.3 Score=40.33 Aligned_cols=35 Identities=29% Similarity=0.484 Sum_probs=30.0
Q ss_pred CCcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 78 HSAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 78 ~~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
..+.-+.|||+|.-|...|..|++ |.+|.++.+.+
T Consensus 12 ~~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 12 HMEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred ccCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 346789999999999999999999 99999998753
No 378
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=61.51 E-value=4.2 Score=40.93 Aligned_cols=29 Identities=17% Similarity=0.211 Sum_probs=26.9
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeec
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLER 110 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEk 110 (612)
-|+|+|+|..|..+|..|.+ |.+|++.++
T Consensus 175 tV~V~G~G~VG~~~A~~L~~~GakVvv~D~ 204 (364)
T 1leh_A 175 AVSVQGLGNVAKALCKKLNTEGAKLVVTDV 204 (364)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECchHHHHHHHHHHHHCCCEEEEEcC
Confidence 48999999999999999999 999999875
No 379
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=61.48 E-value=4.3 Score=39.31 Aligned_cols=32 Identities=19% Similarity=0.254 Sum_probs=27.4
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
--++|+|+|.+|..+|..|++ |. +|.|+.|-.
T Consensus 128 k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 128 DSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 358999999999999999999 87 799987653
No 380
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=61.40 E-value=6.6 Score=38.14 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=29.5
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.|.|||.|.-|...|..|++ |++|.+.++.+
T Consensus 16 ~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 48 (296)
T 3qha_A 16 LKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRI 48 (296)
T ss_dssp CCEEEECCSTTHHHHHHHHTTSTTCEEEECSST
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 469999999999999999999 99999998865
No 381
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=60.92 E-value=3.8 Score=41.23 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.|.|||+|.-|...|..|++ |++|.++.+.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 59999999999999999999 99999998753
No 382
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=60.87 E-value=5 Score=42.83 Aligned_cols=33 Identities=15% Similarity=0.325 Sum_probs=30.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
.|+|||+|..|+-+|..|++ +.+|.|+++.+..
T Consensus 188 ~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 188 RVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHF 221 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCC
T ss_pred EEEEECCCccHHHHHHHHhhcCceEEEEEcCCcc
Confidence 68999999999999999999 9999999998743
No 383
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=60.65 E-value=5.6 Score=38.40 Aligned_cols=31 Identities=35% Similarity=0.565 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.|.|||.|.-|...|..|++ |++|.+.++.+
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 37899999999999999999 99999998765
No 384
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=60.64 E-value=4.3 Score=39.14 Aligned_cols=32 Identities=22% Similarity=0.215 Sum_probs=28.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
--++|+|+|.+|..+|..|++ |. +|.|.-|-.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 358999999999999999999 97 899987764
No 385
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=60.58 E-value=4.7 Score=40.45 Aligned_cols=33 Identities=15% Similarity=0.419 Sum_probs=29.1
Q ss_pred cccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
..-|+|||+|..|+.+|..|+. |. ++.|++...
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~ 152 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQ 152 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCc
Confidence 4579999999999999999999 84 899998764
No 386
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=60.55 E-value=5 Score=41.36 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=29.2
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-..-|||.|.-|+++|..|++ |++|+++++-+
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 457899999999999999999 99999999875
No 387
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=60.49 E-value=4.7 Score=39.32 Aligned_cols=31 Identities=26% Similarity=0.345 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-+.|||.|..|..+|.+|.. |.+|++.++-+
T Consensus 159 ~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 159 QVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999998 99999998753
No 388
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=60.42 E-value=6.1 Score=38.45 Aligned_cols=31 Identities=19% Similarity=0.408 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||.|.-|...|..|++ |++|.+.++.+
T Consensus 5 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 5 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 48999999999999999999 99999998764
No 389
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=60.39 E-value=6.1 Score=38.93 Aligned_cols=31 Identities=23% Similarity=0.508 Sum_probs=28.6
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.|.|||.|.-|...|..|++ |++|.+.++.+
T Consensus 33 ~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 33 KITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 69999999999999999999 99999998764
No 390
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=60.15 E-value=5 Score=37.82 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=29.5
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
..-+.|||.|.-|..+|..|++ |++|.+.++.+
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3468999999999999999999 99999998864
No 391
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=59.71 E-value=5.6 Score=42.59 Aligned_cols=52 Identities=17% Similarity=0.147 Sum_probs=37.5
Q ss_pred hhhhcCCC-CcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcC
Q 007210 251 LLASANPQ-KITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIG 315 (612)
Q Consensus 251 ~l~~a~~~-g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~ 315 (612)
+...+.+. |++|+++ +|++|..++++ ++++|... +|+ ++ .++.||+|+|...
T Consensus 200 L~~~~~~~~Gv~i~~~-~V~~i~~~~~g---~~~~v~~~--~G~--~i-----~ad~vI~A~G~~S 252 (550)
T 2e4g_A 200 LRRFATEKLGVRHVED-RVEHVQRDANG---NIESVRTA--TGR--VF-----DADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHSCCEEEEC-CEEEEEECTTS---CEEEEEET--TSC--EE-----ECSEEEECCGGGC
T ss_pred HHHHHHhcCCcEEEEC-eEeEEEEcCCC---CEEEEEEC--CCC--EE-----ECCEEEECCCCch
Confidence 33445555 9999999 99999886554 77788764 564 23 3689999999743
No 392
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=59.56 E-value=7.5 Score=40.40 Aligned_cols=31 Identities=26% Similarity=0.503 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||+|.-|...|..|++ |.+|++.++.+
T Consensus 56 kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 56 SVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 58999999999999999999 99999999875
No 393
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=59.42 E-value=4.8 Score=39.72 Aligned_cols=30 Identities=27% Similarity=0.386 Sum_probs=27.4
Q ss_pred EEEECCCCchHHHHHhhhc-cC--eeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NF--TVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG~ 112 (612)
|.|||+|.-|..+|..|++ |. .|.++++.+
T Consensus 3 I~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 3 IGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 7899999999999999999 88 999998753
No 394
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=59.32 E-value=4.8 Score=40.30 Aligned_cols=30 Identities=23% Similarity=0.389 Sum_probs=27.3
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeec
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLER 110 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEk 110 (612)
--|+|+|.|..|..+|..|.+ |.+|++.+.
T Consensus 176 ktV~I~G~GnVG~~~A~~l~~~GakVvvsD~ 206 (355)
T 1c1d_A 176 LTVLVQGLGAVGGSLASLAAEAGAQLLVADT 206 (355)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEeC
Confidence 358999999999999999999 999998874
No 395
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=59.17 E-value=5 Score=38.63 Aligned_cols=31 Identities=26% Similarity=0.383 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-++|||+|..|..+|..|.+ |.+|.+..+-+
T Consensus 131 ~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 131 SILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 59999999999999999999 88999988753
No 396
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=59.05 E-value=4.9 Score=41.18 Aligned_cols=32 Identities=25% Similarity=0.220 Sum_probs=28.8
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
--++|||.|..|..+|.+|.. |.+|++.|+-+
T Consensus 221 ktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 221 KQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 368999999999999999988 99999999754
No 397
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=58.97 E-value=6.8 Score=38.71 Aligned_cols=31 Identities=23% Similarity=0.144 Sum_probs=27.1
Q ss_pred cEEEECCCCchHH-HHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCP-LAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~-aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||.|.+|+. +|.-|.+ |++|.+.|+..
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4899999999996 7777777 99999999875
No 398
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=58.94 E-value=5.1 Score=38.03 Aligned_cols=31 Identities=26% Similarity=0.348 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
-++|||+|.+|.+++..|.+ |. +|.|..|-.
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 69999999999999999999 87 899998754
No 399
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=58.82 E-value=5.3 Score=39.22 Aligned_cols=31 Identities=19% Similarity=0.378 Sum_probs=27.5
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERG 111 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG 111 (612)
--++|+|+|.+|..+|..|++ |. +|.|+-|-
T Consensus 149 k~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 358999999999999999999 86 89998876
No 400
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=58.56 E-value=5.5 Score=38.24 Aligned_cols=31 Identities=29% Similarity=0.423 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|+|.|+|.-|..++.+|.+ |.+|.++-+..
T Consensus 5 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 5 KILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 38999999999999999999 99999998865
No 401
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=58.11 E-value=6 Score=38.22 Aligned_cols=32 Identities=16% Similarity=0.205 Sum_probs=27.7
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
--++|+|+|.+|..+|..|++ |. +|.|..|-.
T Consensus 127 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 127 ATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred CEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 358999999999999999999 95 999997753
No 402
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=58.00 E-value=6 Score=37.85 Aligned_cols=31 Identities=16% Similarity=0.288 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|+|.|+|.-|..++.+|.+ |++|.++-+.+
T Consensus 7 ~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 7 TLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp EEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 49999999999999999999 99999998864
No 403
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=57.81 E-value=7.1 Score=37.79 Aligned_cols=31 Identities=19% Similarity=0.441 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.+.|||.|.-|...|..|++ |.+|.++++.+
T Consensus 7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 58999999999999999999 99999998753
No 404
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=57.73 E-value=5.7 Score=38.66 Aligned_cols=31 Identities=26% Similarity=0.489 Sum_probs=28.2
Q ss_pred cEEEEC-CCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVG-GGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVG-sG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.||| .|.-|...|..|++ |.+|.++++.+
T Consensus 23 ~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 23 KIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred EEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 499999 99999999999999 99999998654
No 405
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=57.64 E-value=6.2 Score=35.93 Aligned_cols=30 Identities=20% Similarity=0.350 Sum_probs=27.1
Q ss_pred EEEECC-CCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGG-GTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGs-G~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
|+|.|+ |..|..++.+|.+ |.+|.++-|.+
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 789995 8999999999999 99999998864
No 406
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=57.56 E-value=6.2 Score=39.57 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=27.8
Q ss_pred EEEECCCCchHHHHHhhhc-cCeeeEeecCCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NFTVLLLERGGV 113 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~ 113 (612)
++|+|+|.-|..+|..+.+ |++|++++..+.
T Consensus 4 I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 4 ICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 7999999999999998888 999999987653
No 407
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=57.34 E-value=5.7 Score=40.64 Aligned_cols=30 Identities=27% Similarity=0.287 Sum_probs=27.5
Q ss_pred EEEECCCCchHHHHHhhhccCeeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQNFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Laeg~~VlvLEkG~ 112 (612)
+.|||.|.-|+..|..|++|.+|.++++.+
T Consensus 3 I~VIG~G~vG~~~A~~La~G~~V~~~d~~~ 32 (402)
T 1dlj_A 3 IAVAGSGYVGLSLGVLLSLQNEVTIVDILP 32 (402)
T ss_dssp EEEECCSHHHHHHHHHHTTTSEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHhCCCEEEEEECCH
Confidence 789999999999999999988999998754
No 408
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=57.31 E-value=6 Score=42.50 Aligned_cols=34 Identities=29% Similarity=0.554 Sum_probs=30.9
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCCCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGGVP 114 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~~~ 114 (612)
-.|||||.|--|..+|..|.+ |.+|+++|+.+..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 469999999999999999999 9999999998743
No 409
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=57.28 E-value=5.5 Score=39.02 Aligned_cols=31 Identities=16% Similarity=0.278 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHHHhhhc-c--CeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-N--FTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g--~~VlvLEkG~ 112 (612)
-+.|||+|.-|..+|..|++ | ..|.++++..
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 38899999999999999999 8 6899999853
No 410
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=57.19 E-value=5.7 Score=38.18 Aligned_cols=31 Identities=16% Similarity=0.176 Sum_probs=27.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERG 111 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG 111 (612)
--++|+|+|.+|..+|..|++ |. +|.|.-|-
T Consensus 121 k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~ 153 (272)
T 3pwz_A 121 RRVLLLGAGGAVRGALLPFLQAGPSELVIANRD 153 (272)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CEEEEECccHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 358999999999999999999 95 89998764
No 411
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=57.17 E-value=7.8 Score=37.56 Aligned_cols=32 Identities=25% Similarity=0.327 Sum_probs=28.3
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.+.|||.|.-|...|..|++ |.+|.+.++.+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 358999999999999999999 99999988753
No 412
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=56.94 E-value=5.9 Score=40.84 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=29.1
Q ss_pred ccEEEECCCCchHHHHHhhhccCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQNFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Laeg~~VlvLEkG~ 112 (612)
-.+.|||.|.-|+..|..|++|.+|+++++.+
T Consensus 37 mkIaVIGlG~mG~~lA~~La~G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQNHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHcCCeEEEEecCH
Confidence 36999999999999999999999999999864
No 413
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=56.89 E-value=5.5 Score=41.50 Aligned_cols=30 Identities=23% Similarity=0.289 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
-|+|||+|-.|...|..|.+ |.+|.|++..
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 48999999999999999999 9999999964
No 414
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=56.82 E-value=5.6 Score=38.78 Aligned_cols=32 Identities=19% Similarity=0.199 Sum_probs=28.9
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.|.|||.|.-|...|..|++ |++|.+.++.+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 358999999999999999999 99999998754
No 415
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=56.79 E-value=5 Score=42.64 Aligned_cols=30 Identities=30% Similarity=0.454 Sum_probs=26.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
-++|+|+|.+|..+|..|++ |.+|.++.|.
T Consensus 366 ~vlV~GaGGig~aia~~L~~~G~~V~i~~R~ 396 (523)
T 2o7s_A 366 TVVVIGAGGAGKALAYGAKEKGAKVVIANRT 396 (523)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCC-CEEEESS
T ss_pred EEEEECCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 58999999999999999999 9999998775
No 416
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=56.70 E-value=6.6 Score=38.43 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=29.1
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.|.|||.|.-|...|..|++ |++|.+.++.+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 359999999999999999999 99999998764
No 417
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=56.69 E-value=5.7 Score=38.35 Aligned_cols=31 Identities=23% Similarity=0.413 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||.|.-|...|..|++ |++|.+.++.+
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 38899999999999999999 99999998765
No 418
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=56.67 E-value=6.1 Score=36.13 Aligned_cols=30 Identities=30% Similarity=0.461 Sum_probs=27.2
Q ss_pred EEEECC-CCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGG-GTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGs-G~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
|+|.|+ |..|..++.+|.+ |.+|.++-|.+
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 799998 9999999999999 99999998754
No 419
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=56.53 E-value=5.9 Score=41.07 Aligned_cols=34 Identities=18% Similarity=0.346 Sum_probs=31.0
Q ss_pred CcccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 79 SAFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 79 ~~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
...-+-|||.|.-|+++|..|++ |++|+++++.+
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~ 41 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDA 41 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 35678999999999999999999 99999999876
No 420
>1gq2_A Malic enzyme; oxidoreductase, pigeon liver, NADP-dependent, NAD-NADP selectivity, decarboxylase, malate, Mn2+; HET: NAP; 2.5A {Columba livia} SCOP: c.2.1.7 c.58.1.3 PDB: 2aw5_A
Probab=56.50 E-value=9.5 Score=40.02 Aligned_cols=33 Identities=15% Similarity=0.301 Sum_probs=27.1
Q ss_pred cccEEEECCCCchHHHHHhhhc-----c-------CeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-----N-------FTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-----g-------~~VlvLEkG~ 112 (612)
+--|||.|+|.||+.+|..|.. | .+|.++++-+
T Consensus 282 d~riv~~GAGaAg~gia~ll~~~~~~~G~~~eeA~~~i~~~D~~G 326 (555)
T 1gq2_A 282 DHTVLFQGAGEAALGIANLIVMAMQKEGVSKEEAIKRIWMVDSKG 326 (555)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHHHHHTCCHHHHHTTEEEEETTE
T ss_pred hcEEEEECCCHHHHHHHHHHHHHHHHcCCChHHHhCcEEEEECCC
Confidence 4569999999999999987764 5 4788888865
No 421
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=56.42 E-value=7.5 Score=37.28 Aligned_cols=30 Identities=23% Similarity=0.417 Sum_probs=26.9
Q ss_pred cEEEECCCCchHHHHHhhhc-cC-eeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF-TVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG 111 (612)
.++|+|+|.+|..+|..|.+ |. +|.|.-|-
T Consensus 121 ~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt 152 (271)
T 1npy_A 121 KVIVHGSGGMAKAVVAAFKNSGFEKLKIYARN 152 (271)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCCCEEEECSC
T ss_pred EEEEECCcHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 59999999999999999999 85 79998765
No 422
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=56.09 E-value=6.4 Score=38.60 Aligned_cols=30 Identities=27% Similarity=0.409 Sum_probs=27.3
Q ss_pred EEEECCCCchHHHHHhhhc---cCeeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ---NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae---g~~VlvLEkG~ 112 (612)
|.|||+|..|..+|..|++ +.+|.++++.+
T Consensus 3 I~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 3 ITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 7899999999999999998 57999999865
No 423
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=56.08 E-value=8.2 Score=37.28 Aligned_cols=30 Identities=20% Similarity=0.389 Sum_probs=27.4
Q ss_pred EEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+.|||.|.-|...|..|++ |.+|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 3 VGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred EEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 7899999999999999999 99999998754
No 424
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=56.02 E-value=9.7 Score=40.51 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=37.8
Q ss_pred hhhhcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcC
Q 007210 251 LLASANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIG 315 (612)
Q Consensus 251 ~l~~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~ 315 (612)
+...+.+.|++++.+ +|++|..++++ .+++|... +|+ ++ .++.||+|+|...
T Consensus 171 L~~~a~~~gv~~~~~-~v~~i~~~~~g---~~~~v~~~--~g~--~i-----~ad~vV~A~G~~s 222 (538)
T 2aqj_A 171 LKRWAVERGVNRVVD-EVVDVRLNNRG---YISNLLTK--EGR--TL-----EADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHTTCEEEEC-CEEEEEECTTS---CEEEEEET--TSC--EE-----CCSEEEECCGGGC
T ss_pred HHHHHHHCCCEEEEe-eEeEEEEcCCC---cEEEEEEC--CCc--EE-----EeCEEEECCCCch
Confidence 344455679999999 89999886554 67777663 564 23 4699999999754
No 425
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=55.89 E-value=4.9 Score=37.57 Aligned_cols=29 Identities=17% Similarity=0.241 Sum_probs=27.0
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeec
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLER 110 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEk 110 (612)
.|.|||.|.-|..+|..|.+ |++|.++.+
T Consensus 8 kI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 8 RVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp EEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred EEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 58999999999999999999 999998876
No 426
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=55.82 E-value=5.6 Score=41.02 Aligned_cols=28 Identities=25% Similarity=0.439 Sum_probs=26.1
Q ss_pred cEEEECCCCchHHHHHhhhc-cC---eeeEee
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF---TVLLLE 109 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~---~VlvLE 109 (612)
-++|+|+|.+|..+|..|.+ |. +|.|++
T Consensus 188 rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 188 TLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred EEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 59999999999999999999 86 799998
No 427
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=55.78 E-value=6.7 Score=38.70 Aligned_cols=31 Identities=29% Similarity=0.485 Sum_probs=28.0
Q ss_pred cEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
-|.|||+|..|..+|..|+. |. +|.|++.-.
T Consensus 6 kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 6 KIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 59999999999999999999 87 899999754
No 428
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=55.70 E-value=6.1 Score=38.88 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHHhhhc-cC-eeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF-TVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG 111 (612)
-|.|||+|.-|..+|..|+. |. .|.+++.-
T Consensus 10 kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 10 KVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 59999999999999999999 88 99999986
No 429
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=55.59 E-value=6.4 Score=35.30 Aligned_cols=30 Identities=27% Similarity=0.426 Sum_probs=27.5
Q ss_pred EEEECC-CCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGG-GTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGs-G~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
++|+|+ |.-|..++.+|.+ |.+|.++.+.+
T Consensus 6 ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 6 IAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred EEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 899998 9999999999999 99999998865
No 430
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=55.39 E-value=6 Score=41.56 Aligned_cols=31 Identities=19% Similarity=0.213 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|+|||.|..|..+|..|.. |.+|++.|+.+
T Consensus 276 tV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 276 KVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999988 99999999764
No 431
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=55.36 E-value=5.7 Score=40.12 Aligned_cols=32 Identities=13% Similarity=0.223 Sum_probs=29.0
Q ss_pred cEEEECCCCchHHHHHhhhc-c-------CeeeEeecCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-N-------FTVLLLERGGV 113 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g-------~~VlvLEkG~~ 113 (612)
-|.|||+|.-|...|..|++ | .+|.++.+.+.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 49999999999999999999 9 89999988653
No 432
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=55.32 E-value=6.2 Score=37.80 Aligned_cols=30 Identities=30% Similarity=0.349 Sum_probs=27.2
Q ss_pred EEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+.|||+|.-|...|..|.+ |.+|.++++.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 3 IGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 7899999999999999999 99999998753
No 433
>1o0s_A NAD-ME, NAD-dependent malic enzyme; oxidoreductase, oxidative decarboxylase, rossmann fold, MAla dehydrogenase; HET: NAI; 2.00A {Ascaris suum} SCOP: c.2.1.7 c.58.1.3 PDB: 1llq_A*
Probab=55.27 E-value=8.5 Score=40.70 Aligned_cols=33 Identities=21% Similarity=0.443 Sum_probs=26.9
Q ss_pred cccEEEECCCCchHHHHHhhhc-----c-------CeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-----N-------FTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-----g-------~~VlvLEkG~ 112 (612)
+--|||.|+|.||+.+|..|.. | .+|.++++-+
T Consensus 320 d~riv~~GAGaAgigia~ll~~~m~~~Gl~~eeA~~~i~~vD~~G 364 (605)
T 1o0s_A 320 QEKYLFFGAGAASTGIAEMIVHQMQNEGISKEEACNRIYLMDIDG 364 (605)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHHHTTTCCHHHHHHTEEEEETTE
T ss_pred hcEEEEECCCHHHHHHHHHHHHHHHHcCCChhhhhCeEEEEECCC
Confidence 4569999999999999987764 5 3688888865
No 434
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=55.06 E-value=9 Score=39.80 Aligned_cols=30 Identities=20% Similarity=0.333 Sum_probs=27.2
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
-|+|+|+|..|..+|..|++ |.+|.++.+.
T Consensus 5 ~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~ 35 (450)
T 1ff9_A 5 SVLMLGSGFVTRPTLDVLTDSGIKVTVACRT 35 (450)
T ss_dssp EEEEECCSTTHHHHHHHHHTTTCEEEEEESS
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEECC
Confidence 38999999999999999999 9999998875
No 435
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=54.98 E-value=7.1 Score=40.28 Aligned_cols=33 Identities=24% Similarity=0.577 Sum_probs=28.9
Q ss_pred cccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
..-|+|||+|..|+.+|..|+. |. ++.|++...
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~ 74 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDT 74 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCB
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCE
Confidence 4679999999999999999999 84 899998654
No 436
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=54.83 E-value=5.5 Score=39.78 Aligned_cols=32 Identities=19% Similarity=0.189 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHHHhhhc-c-------CeeeEeecCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-N-------FTVLLLERGGV 113 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g-------~~VlvLEkG~~ 113 (612)
-|.|||+|.-|...|..|++ | .+|.++++.+.
T Consensus 10 kI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 10 KVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred eEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 59999999999999999999 8 89999998753
No 437
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=54.80 E-value=9.6 Score=36.38 Aligned_cols=30 Identities=13% Similarity=0.070 Sum_probs=26.6
Q ss_pred EEEECC---CCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGG---GTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGs---G~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
++|.|+ |..|..+|.+|++ |++|+++.+..
T Consensus 9 vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~ 42 (275)
T 2pd4_A 9 GLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNE 42 (275)
T ss_dssp EEEECCCSTTSHHHHHHHHHHTTTCEEEEEESST
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCH
Confidence 889997 5889999999999 99999998764
No 438
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=54.75 E-value=6.5 Score=37.24 Aligned_cols=30 Identities=23% Similarity=0.576 Sum_probs=27.3
Q ss_pred EEEECCCCchHHHHHhhhc-c-CeeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-N-FTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG~ 112 (612)
+.|||+|.-|...|..|++ | .+|.+.++.+
T Consensus 3 i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 3 VYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 7899999999999999999 9 8999998753
No 439
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=54.61 E-value=6.9 Score=38.49 Aligned_cols=31 Identities=19% Similarity=0.147 Sum_probs=28.9
Q ss_pred cEEEECCCCchHHHHHhhhc-c-CeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-N-FTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG~ 112 (612)
.|.|||.|.-|...|..|++ | .+|.+.++.+
T Consensus 26 ~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 26 TIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred eEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 49999999999999999999 9 9999999875
No 440
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=54.36 E-value=6.5 Score=40.43 Aligned_cols=31 Identities=26% Similarity=0.200 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-++|||.|..|..+|.+|.. |.+|++.|+-+
T Consensus 249 TVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp 280 (464)
T 3n58_A 249 VAVVCGYGDVGKGSAQSLAGAGARVKVTEVDP 280 (464)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 58999999999999999988 99999998754
No 441
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=54.06 E-value=7.2 Score=40.69 Aligned_cols=31 Identities=42% Similarity=0.723 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHHhhhccCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQNFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Laeg~~VlvLEkG~ 112 (612)
.++|+|+|-.|..+|..|.++.+|-|+|+..
T Consensus 237 ~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~ 267 (461)
T 4g65_A 237 RIMIVGGGNIGASLAKRLEQTYSVKLIERNL 267 (461)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSEEEEEESCH
T ss_pred EEEEEcchHHHHHHHHHhhhcCceEEEecCH
Confidence 6999999999999999997789999999975
No 442
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=53.77 E-value=6.2 Score=41.42 Aligned_cols=31 Identities=29% Similarity=0.471 Sum_probs=28.3
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||+|.-|...|..|++ |++|++.++.+
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 48999999999999999999 99999998764
No 443
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=53.47 E-value=6.8 Score=39.13 Aligned_cols=33 Identities=21% Similarity=0.261 Sum_probs=29.0
Q ss_pred cccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
..-|+|||+|..|+.+|..|+. |. ++.|++-..
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~ 70 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQ 70 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 3579999999999999999999 85 899998654
No 444
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=53.32 E-value=11 Score=37.13 Aligned_cols=32 Identities=31% Similarity=0.388 Sum_probs=27.3
Q ss_pred cccEEEECCC-CchHHHHHhhhc-cCeeeEeecC
Q 007210 80 AFDYIVVGGG-TAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 80 ~~DvIVVGsG-~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
.-.++|||+| ..|..+|..|.. |.+|.|+.+-
T Consensus 177 gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 177 GKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 4579999999 569999999999 9999988654
No 445
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=53.22 E-value=7 Score=38.30 Aligned_cols=31 Identities=23% Similarity=0.392 Sum_probs=27.5
Q ss_pred cEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
-|.|||+|..|..+|..|+. |. +|.+++.-.
T Consensus 4 kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 4 KISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 48999999999999999999 75 899999754
No 446
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=52.99 E-value=6.7 Score=38.42 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=28.7
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-.+.|||+|.-|...|..|++ |.+|.++++.+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 359999999999999999999 99999998754
No 447
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=52.94 E-value=8 Score=35.30 Aligned_cols=30 Identities=27% Similarity=0.426 Sum_probs=27.3
Q ss_pred EEEEC-CCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVG-GGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVG-sG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
|+|.| +|..|..++.+|.+ |.+|.++-|.+
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKV 34 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSG
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCc
Confidence 78999 68999999999999 99999999875
No 448
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=52.90 E-value=8.8 Score=36.49 Aligned_cols=30 Identities=13% Similarity=0.176 Sum_probs=26.3
Q ss_pred EEEEC---CCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVG---GGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVG---sG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
++|.| +|.-|..+|.+|++ |.+|+++.+..
T Consensus 10 vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 10 ILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred EEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 88999 47889999999999 99999998753
No 449
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=52.84 E-value=6.2 Score=35.51 Aligned_cols=31 Identities=6% Similarity=0.095 Sum_probs=25.9
Q ss_pred cEEEEC-CCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVG-GGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVG-sG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|+|+| +|..|..++..+.. |.+|+++++.+
T Consensus 41 ~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~ 73 (198)
T 1pqw_A 41 RVLIHSATGGVGMAAVSIAKMIGARIYTTAGSD 73 (198)
T ss_dssp EEEETTTTSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred EEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCH
Confidence 388999 58889999988887 99999998753
No 450
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=52.78 E-value=7.9 Score=40.27 Aligned_cols=50 Identities=18% Similarity=0.321 Sum_probs=35.8
Q ss_pred CCcEEEeccEEEEEEecCCCCCCeEEEEEEEe--------------CCCCeEEEEeecCCCceEEecCCCcCCh
Q 007210 258 QKITVLIRATVQKIVFDTSGKRPKAVGVIFKD--------------ENGNQHQAFLAGNPKSEVILSCGAIGTP 317 (612)
Q Consensus 258 ~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~--------------~~g~~~~v~~~~~a~k~VILaaG~~~sp 317 (612)
.|++|++++.+.+|.-+ + ++.+|++.+ .+|+...+ .+..||+|+|.-.++
T Consensus 265 ~gv~i~~~~~~~~i~~~-~----~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i-----~~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 265 RRMVFRFLTSPIEIKGK-R----KVERIVLGRNELVSDGSGRVAAKDTGEREEL-----PAQLVVRSVGYRGVP 328 (456)
T ss_dssp EEEEEECSEEEEEEECS-S----SCCEEEEEEEEEEECSSSSEEEEEEEEEEEE-----ECSEEEECSCEECCC
T ss_pred ceEEEEeCCCCeEEecC-C----cEeEEEEEEEEecCCCcccccccCCCceEEE-----EcCEEEEccccccCC
Confidence 68999999999998754 2 666777652 13433344 468999999987766
No 451
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=52.46 E-value=10 Score=39.63 Aligned_cols=32 Identities=31% Similarity=0.431 Sum_probs=29.1
Q ss_pred cEEEECCCCchHHHHHhhhc--cC-eeeEeecCCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ--NF-TVLLLERGGV 113 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae--g~-~VlvLEkG~~ 113 (612)
.|.|||.|.-|+.+|..|++ |+ +|+++++.+.
T Consensus 20 kIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 20 KIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp EEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred EEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 59999999999999999998 68 9999998764
No 452
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=52.37 E-value=6.7 Score=40.02 Aligned_cols=28 Identities=25% Similarity=0.400 Sum_probs=25.6
Q ss_pred cEEEECCCCchHHHHHhhhc--cCeeeEee
Q 007210 82 DYIVVGGGTAGCPLAATLSQ--NFTVLLLE 109 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae--g~~VlvLE 109 (612)
.|.|||+|.-|...|..|++ |.+|.++.
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 48999999999999999976 78999998
No 453
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=52.30 E-value=4.1 Score=37.66 Aligned_cols=32 Identities=25% Similarity=0.578 Sum_probs=28.0
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeE-eecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLL-LERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~Vlv-LEkG~ 112 (612)
.-+.|||+|.-|...|..|++ |.+|.+ .++.+
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 369999999999999999999 999988 77654
No 454
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=52.24 E-value=8 Score=35.38 Aligned_cols=30 Identities=27% Similarity=0.370 Sum_probs=26.7
Q ss_pred EEEEC-CCCchHHHHHhhh-c-cCeeeEeecCC
Q 007210 83 YIVVG-GGTAGCPLAATLS-Q-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVG-sG~aG~~aA~~La-e-g~~VlvLEkG~ 112 (612)
++|.| +|..|..+|.+|+ + |++|.++.+.+
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~ 40 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQL 40 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSH
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCc
Confidence 89999 4889999999999 6 99999998864
No 455
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=52.10 E-value=7.2 Score=37.09 Aligned_cols=31 Identities=29% Similarity=0.451 Sum_probs=27.9
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.+.|||+|..|..+|..|.+ |.+|.+..+-.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999 88999988753
No 456
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=52.03 E-value=5.9 Score=41.73 Aligned_cols=58 Identities=16% Similarity=0.090 Sum_probs=42.5
Q ss_pred hcCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHHHHcCC
Q 007210 254 SANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQMLKLSGV 325 (612)
Q Consensus 254 ~a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lLl~SGI 325 (612)
.+++.|++|++++.|++|.-++ ++.+|.. .+|+. + .++.||+|+|..-+..|+..+|+
T Consensus 266 ~l~~~GV~v~~~~~v~~i~~~~-----~v~~v~~--~~g~~--i-----~aD~Vv~a~G~~p~~~l~~~~g~ 323 (493)
T 1y56_A 266 ELERWGIDYVHIPNVKRVEGNE-----KVERVID--MNNHE--Y-----KVDALIFADGRRPDINPITQAGG 323 (493)
T ss_dssp HHHHHTCEEEECSSEEEEECSS-----SCCEEEE--TTCCE--E-----ECSEEEECCCEEECCHHHHHTTC
T ss_pred HHHhCCcEEEeCCeeEEEecCC-----ceEEEEe--CCCeE--E-----EeCEEEECCCcCcCchHHHhcCC
Confidence 3456799999999999997542 4556654 45643 3 35899999998777778877765
No 457
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=52.00 E-value=8.6 Score=35.88 Aligned_cols=30 Identities=27% Similarity=0.488 Sum_probs=26.4
Q ss_pred EEEECC-CCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGG-GTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGs-G~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
++|.|+ |.-|..+|.+|++ |.+|+++.+.+
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~ 35 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQ 35 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 788887 8889999999999 99999998864
No 458
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=51.84 E-value=7.5 Score=37.27 Aligned_cols=30 Identities=23% Similarity=0.404 Sum_probs=26.9
Q ss_pred EEEECCCCchHHHHHhhhc-cC--eeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NF--TVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG~ 112 (612)
+.|||.|.-|...|..|++ |. +|++.++.+
T Consensus 4 I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 4 VLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 7899999999999999999 87 899988653
No 459
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=51.81 E-value=9.9 Score=36.83 Aligned_cols=29 Identities=14% Similarity=0.149 Sum_probs=25.7
Q ss_pred EEEECCC---CchHHHHHhhhc-cCeeeEeecC
Q 007210 83 YIVVGGG---TAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 83 vIVVGsG---~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
+||.|++ ..|..+|.+|++ |.+|+++.+.
T Consensus 33 vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 33 GVIIGVANDKSLAWGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCC
Confidence 7888985 788999999999 9999999875
No 460
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=51.62 E-value=9.8 Score=35.95 Aligned_cols=30 Identities=27% Similarity=0.317 Sum_probs=26.3
Q ss_pred EEEECC---CCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGG---GTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGs---G~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
++|.|+ |.-|..+|.+|++ |++|+++.+..
T Consensus 11 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 44 (261)
T 2wyu_A 11 ALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAE 44 (261)
T ss_dssp EEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCG
T ss_pred EEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCH
Confidence 899997 5889999999999 99999998753
No 461
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=51.34 E-value=7.8 Score=37.97 Aligned_cols=31 Identities=19% Similarity=0.255 Sum_probs=28.4
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERG 111 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG 111 (612)
--|.|||.|.-|...|..|++ |+ +|.+.++.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 369999999999999999999 98 99999885
No 462
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=51.24 E-value=17 Score=37.81 Aligned_cols=41 Identities=15% Similarity=0.197 Sum_probs=30.3
Q ss_pred CcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCC
Q 007210 259 KITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGA 313 (612)
Q Consensus 259 g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~ 313 (612)
+.+|+++++|++|..+++ +++ |.+ .+|+.+ .++.||+|++.
T Consensus 228 ~~~i~~~~~V~~i~~~~~----~v~-v~~--~~g~~~-------~ad~vI~a~~~ 268 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPG----GVT-VKT--EDNSVY-------SADYVMVSASL 268 (472)
T ss_dssp CTTEESSCCEEEEEECSS----CEE-EEE--TTSCEE-------EESEEEECSCH
T ss_pred ccEEEcCCEEEEEEEcCC----cEE-EEE--CCCCEE-------EcCEEEEecCH
Confidence 678999999999998765 444 444 467543 24899999983
No 463
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=51.16 E-value=7.9 Score=37.29 Aligned_cols=31 Identities=13% Similarity=0.327 Sum_probs=28.1
Q ss_pred cEEEECC-CCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGG-GTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGs-G~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-+.|||+ |.-|...|..|++ |.+|.+.++.+
T Consensus 13 ~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 13 TVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 5999999 9999999999999 99999998753
No 464
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=51.14 E-value=7.9 Score=39.74 Aligned_cols=32 Identities=28% Similarity=0.197 Sum_probs=28.7
Q ss_pred ccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
--|+|||.|..|..+|.+|.. |.+|++.|.-+
T Consensus 212 ktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 212 KTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 359999999999999999998 99999999753
No 465
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=50.76 E-value=8.1 Score=38.16 Aligned_cols=30 Identities=17% Similarity=0.406 Sum_probs=27.0
Q ss_pred cEEEECCCCchHHHHHhhhc-cC--eeeEeecC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF--TVLLLERG 111 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG 111 (612)
-|.|||+|..|.++|..|+. |. .|.+++.-
T Consensus 7 kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 7 KVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 58999999999999999999 75 89999874
No 466
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=50.76 E-value=11 Score=35.70 Aligned_cols=30 Identities=20% Similarity=0.341 Sum_probs=25.3
Q ss_pred EEEECCC---CchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGGG---TAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG---~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+||-|++ ..|..+|.+|++ |++|++..+..
T Consensus 9 alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE 42 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 6888863 578999999999 99999998753
No 467
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=50.63 E-value=11 Score=36.85 Aligned_cols=28 Identities=25% Similarity=0.176 Sum_probs=24.8
Q ss_pred EEEECC---CCchHHHHHhhhc-cCeeeEeec
Q 007210 83 YIVVGG---GTAGCPLAATLSQ-NFTVLLLER 110 (612)
Q Consensus 83 vIVVGs---G~aG~~aA~~Lae-g~~VlvLEk 110 (612)
+||.|+ |..|..+|.+|++ |.+|+++.+
T Consensus 12 ~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r 43 (315)
T 2o2s_A 12 AFVAGVADSHGYGWAIAKHLASAGARVALGTW 43 (315)
T ss_dssp EEEECCSSSSSHHHHHHHHHHTTTCEEEEEEC
T ss_pred EEEeCCCCCCChHHHHHHHHHHCCCEEEEEec
Confidence 789996 7789999999999 999999865
No 468
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=50.56 E-value=8 Score=39.54 Aligned_cols=31 Identities=32% Similarity=0.475 Sum_probs=27.7
Q ss_pred cEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
-|+|||+|..|..+|..|.. |. +|++..+.+
T Consensus 169 ~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 169 TVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 59999999999999999998 97 899998753
No 469
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=50.07 E-value=8.6 Score=37.36 Aligned_cols=30 Identities=23% Similarity=0.166 Sum_probs=27.0
Q ss_pred EEEECCCCchHHHHHhhhc-cC--eeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NF--TVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG~ 112 (612)
|.|||+|.-|.++|..|+. +. .|.+++.-+
T Consensus 3 I~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 3 LGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 7899999999999999999 76 899999754
No 470
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=49.89 E-value=11 Score=35.81 Aligned_cols=30 Identities=10% Similarity=0.133 Sum_probs=26.2
Q ss_pred EEEECC---CCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGG---GTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGs---G~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
++|.|+ |..|..+|.+|++ |++|+++.+..
T Consensus 12 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 12 ILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp EEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 788887 5889999999999 99999998754
No 471
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=49.50 E-value=8.6 Score=37.77 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=28.1
Q ss_pred cEEEECCCCchHHHHHhhhc-cC--eeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NF--TVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG~ 112 (612)
-|.|||.|.-|...|..|.+ |. +|.+.++.+
T Consensus 35 kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 35 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 59999999999999999999 88 999988764
No 472
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=48.85 E-value=12 Score=35.31 Aligned_cols=30 Identities=20% Similarity=0.470 Sum_probs=25.2
Q ss_pred EEEECCCC-chHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGGGT-AGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~-aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
++|.|++. -|..+|.+|++ |.+|+++.+..
T Consensus 12 vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~ 43 (261)
T 3n74_A 12 ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK 43 (261)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 78888754 58999999999 99999998753
No 473
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=48.85 E-value=13 Score=36.07 Aligned_cols=32 Identities=34% Similarity=0.523 Sum_probs=27.5
Q ss_pred cccEEEECCC-CchHHHHHhhhc-cCeeeEeecC
Q 007210 80 AFDYIVVGGG-TAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 80 ~~DvIVVGsG-~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
--.++|||.| ..|..+|..|.. |.+|.++.+.
T Consensus 165 Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~ 198 (300)
T 4a26_A 165 GKRAVVLGRSNIVGAPVAALLMKENATVTIVHSG 198 (300)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 4579999965 589999999999 9999999863
No 474
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=48.79 E-value=9.6 Score=36.74 Aligned_cols=28 Identities=21% Similarity=0.395 Sum_probs=26.1
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEee
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLE 109 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLE 109 (612)
-+.|||.|.-|...|..|++ |.+|.+.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLARAGHQLHVTT 33 (295)
T ss_dssp EEEECCCSTTHHHHHHHHHHTTCEEEECC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEEc
Confidence 48999999999999999999 99999987
No 475
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=48.49 E-value=19 Score=37.10 Aligned_cols=47 Identities=21% Similarity=0.226 Sum_probs=33.0
Q ss_pred cEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCCcCChHHH
Q 007210 260 ITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGAIGTPQML 320 (612)
Q Consensus 260 ~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~~~sp~lL 320 (612)
.+|+++++|++|..+++ ++ .|.+ .+|+. + .++.||+|+......+||
T Consensus 248 ~~i~~~~~V~~i~~~~~----~~-~v~~--~~g~~--~-----~ad~vi~a~p~~~~~~l~ 294 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGS----CY-SLEL--DNGVT--L-----DADSVIVTAPHKAAAGML 294 (470)
T ss_dssp EEEECSCCEEEEEECSS----SE-EEEE--SSSCE--E-----EESEEEECSCHHHHHHHT
T ss_pred CEEEeCCceEEEEEcCC----eE-EEEE--CCCCE--E-----ECCEEEECCCHHHHHHHc
Confidence 79999999999998765 32 2443 46754 2 248999999875544543
No 476
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=48.45 E-value=9.1 Score=41.43 Aligned_cols=33 Identities=30% Similarity=0.503 Sum_probs=29.2
Q ss_pred cccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
..-|+|||+|.-|+.+|..|+. |. ++.|++...
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~ 51 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDT 51 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCB
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 3579999999999999999999 84 899999764
No 477
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=48.39 E-value=9.3 Score=37.69 Aligned_cols=32 Identities=22% Similarity=0.352 Sum_probs=28.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC-eeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF-TVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~-~VlvLEkG~ 112 (612)
--|.|||+|..|..+|..|+. |. .|.+++.-+
T Consensus 8 ~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 8 NKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 359999999999999999999 77 999999865
No 478
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=48.29 E-value=12 Score=35.37 Aligned_cols=29 Identities=17% Similarity=0.306 Sum_probs=24.9
Q ss_pred EEEECCC-C--chHHHHHhhhc-cCeeeEeecC
Q 007210 83 YIVVGGG-T--AGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 83 vIVVGsG-~--aG~~aA~~Lae-g~~VlvLEkG 111 (612)
++|.|++ . .|..+|.+|++ |.+|+++.+.
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~ 42 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHEAGARLIFTYAG 42 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCc
Confidence 7889974 3 69999999999 9999999765
No 479
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=48.28 E-value=14 Score=35.75 Aligned_cols=30 Identities=17% Similarity=0.279 Sum_probs=25.1
Q ss_pred EEEECCC-CchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGGG-TAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG-~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
+||.|++ ..|..+|.+|++ |.+|+++.+..
T Consensus 31 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~~ 62 (299)
T 3t7c_A 31 AFITGAARGQGRSHAITLAREGADIIAIDVCK 62 (299)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeccc
Confidence 7777864 468999999999 99999998864
No 480
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=48.23 E-value=9.3 Score=35.44 Aligned_cols=31 Identities=19% Similarity=0.418 Sum_probs=27.5
Q ss_pred cEEEEC-CCCchHHHHHhhhc-c-CeeeEeecCC
Q 007210 82 DYIVVG-GGTAGCPLAATLSQ-N-FTVLLLERGG 112 (612)
Q Consensus 82 DvIVVG-sG~aG~~aA~~Lae-g-~~VlvLEkG~ 112 (612)
-|+|.| +|..|..+|.+|++ | .+|+++-|.+
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~ 58 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQP 58 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSG
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcCh
Confidence 489999 58999999999999 8 8999998865
No 481
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=48.19 E-value=11 Score=36.28 Aligned_cols=30 Identities=7% Similarity=0.092 Sum_probs=26.0
Q ss_pred EEEECC---CCchHHHHHhhhc-cCeeeEeecCC
Q 007210 83 YIVVGG---GTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGs---G~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
++|.|+ |..|..+|.+|++ |.+|+++.+..
T Consensus 24 vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 57 (285)
T 2p91_A 24 ALITGVANERSIAYGIAKSFHREGAQLAFTYATP 57 (285)
T ss_dssp EEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCH
Confidence 788887 5789999999999 99999998753
No 482
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=47.94 E-value=9.9 Score=36.38 Aligned_cols=31 Identities=23% Similarity=0.401 Sum_probs=26.6
Q ss_pred ccEEEECCCCchHHHHHhhhc-c-CeeeEeecC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-N-FTVLLLERG 111 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g-~~VlvLEkG 111 (612)
-.++|+|+|.++-+++..|++ | .+|.|+-|-
T Consensus 126 ~~~lilGaGGaarai~~aL~~~g~~~i~i~nRt 158 (269)
T 3tum_A 126 KRALVIGCGGVGSAIAYALAEAGIASITLCDPS 158 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred CeEEEEecHHHHHHHHHHHHHhCCCeEEEeCCC
Confidence 359999999999999999999 7 578888664
No 483
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=47.90 E-value=13 Score=35.63 Aligned_cols=32 Identities=34% Similarity=0.442 Sum_probs=27.3
Q ss_pred cccEEEECCC-CchHHHHHhhhc-cCeeeEeecC
Q 007210 80 AFDYIVVGGG-TAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 80 ~~DvIVVGsG-~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
--.++|||.| ..|..+|..|.. |.+|.++.+-
T Consensus 161 Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~ 194 (286)
T 4a5o_A 161 GMDAVVVGASNIVGRPMALELLLGGCTVTVTHRF 194 (286)
T ss_dssp TCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence 4589999955 599999999999 9999999753
No 484
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=47.76 E-value=8.8 Score=36.37 Aligned_cols=28 Identities=21% Similarity=0.179 Sum_probs=25.4
Q ss_pred EEEECCCCchHHHHHhhhc-cCeeeEeec
Q 007210 83 YIVVGGGTAGCPLAATLSQ-NFTVLLLER 110 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Lae-g~~VlvLEk 110 (612)
+.|||.|.-|...|..|++ |++|.+.++
T Consensus 3 I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 3 VGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred EEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 7899999999999999999 999998655
No 485
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=47.72 E-value=14 Score=35.28 Aligned_cols=30 Identities=30% Similarity=0.528 Sum_probs=26.6
Q ss_pred EEEECCCCchHHHHHhhhccCeeeEeecCC
Q 007210 83 YIVVGGGTAGCPLAATLSQNFTVLLLERGG 112 (612)
Q Consensus 83 vIVVGsG~aG~~aA~~Laeg~~VlvLEkG~ 112 (612)
+.|||.|.-|...|..|++|.+|.+.++.+
T Consensus 4 i~iiG~G~~G~~~a~~l~~g~~V~~~~~~~ 33 (289)
T 2cvz_A 4 VAFIGLGAMGYPMAGHLARRFPTLVWNRTF 33 (289)
T ss_dssp EEEECCSTTHHHHHHHHHTTSCEEEECSST
T ss_pred EEEEcccHHHHHHHHHHhCCCeEEEEeCCH
Confidence 789999999999999987788999998754
No 486
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=47.45 E-value=9.1 Score=42.42 Aligned_cols=31 Identities=32% Similarity=0.571 Sum_probs=28.7
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-|.|||+|.-|...|..|++ |++|++.++.+
T Consensus 314 kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred EEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 49999999999999999999 99999999864
No 487
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=47.33 E-value=15 Score=36.04 Aligned_cols=30 Identities=27% Similarity=0.382 Sum_probs=26.6
Q ss_pred EEEECC-CCchHHHHHhhhc-c--CeeeEeecCC
Q 007210 83 YIVVGG-GTAGCPLAATLSQ-N--FTVLLLERGG 112 (612)
Q Consensus 83 vIVVGs-G~aG~~aA~~Lae-g--~~VlvLEkG~ 112 (612)
|.|||+ |..|..+|..|++ + ..|.+++.-+
T Consensus 3 I~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~ 36 (314)
T 1mld_A 3 VAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH 36 (314)
T ss_dssp EEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS
T ss_pred EEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc
Confidence 799998 9999999999999 6 5899998753
No 488
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=47.31 E-value=9.7 Score=37.47 Aligned_cols=32 Identities=19% Similarity=0.293 Sum_probs=28.0
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC--eeeEeecCC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF--TVLLLERGG 112 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG~ 112 (612)
.-|.|||+|..|.++|..|+. +. .|.+++.-.
T Consensus 8 ~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 8 SKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 569999999999999999999 65 899999754
No 489
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=47.13 E-value=10 Score=37.57 Aligned_cols=31 Identities=13% Similarity=0.147 Sum_probs=26.4
Q ss_pred cEEEECCCCchHHHHHhhhc--cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ--NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae--g~~VlvLEkG~ 112 (612)
-|+|+|+|..|+.++..|+. |.+|++++..+
T Consensus 166 ~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~ 198 (348)
T 4eez_A 166 WQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQ 198 (348)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSCCEEEEEESCH
T ss_pred EEEEEcCCCccHHHHHHHHHhCCCEEEEEECcH
Confidence 48999999999988888876 78999998764
No 490
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=47.04 E-value=13 Score=36.42 Aligned_cols=28 Identities=21% Similarity=0.178 Sum_probs=24.9
Q ss_pred EEEECC---CCchHHHHHhhhc-cCeeeEeec
Q 007210 83 YIVVGG---GTAGCPLAATLSQ-NFTVLLLER 110 (612)
Q Consensus 83 vIVVGs---G~aG~~aA~~Lae-g~~VlvLEk 110 (612)
+||.|+ +..|..+|.+|++ |.+|+++.+
T Consensus 12 ~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r 43 (319)
T 2ptg_A 12 AFVAGVADSNGYGWAICKLLRAAGARVLVGTW 43 (319)
T ss_dssp EEEECCCCTTSHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEeCCCCCCcHHHHHHHHHHHCCCEEEEEec
Confidence 899995 7889999999999 999999864
No 491
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=47.02 E-value=13 Score=38.98 Aligned_cols=31 Identities=26% Similarity=0.472 Sum_probs=27.6
Q ss_pred cEEEECCCCchHHHHHhhhc-c--CeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-N--FTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g--~~VlvLEkG~ 112 (612)
-+.|||.|.-|+..|..|++ | .+|+++++.+
T Consensus 11 kI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 11 KVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp EEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 59999999999999999998 4 7999998753
No 492
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=47.00 E-value=11 Score=35.08 Aligned_cols=29 Identities=21% Similarity=0.253 Sum_probs=25.4
Q ss_pred EEEECC-CCchHHHHHhhhc-cCeeeEeecC
Q 007210 83 YIVVGG-GTAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 83 vIVVGs-G~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
++|.|+ |.-|..+|.+|++ |.+|+++.+.
T Consensus 10 vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 10 ALVTGAGKGIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCC
Confidence 788887 6789999999999 9999999875
No 493
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=46.95 E-value=7 Score=38.73 Aligned_cols=30 Identities=13% Similarity=0.162 Sum_probs=27.8
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.+||+|.|--|..+|..|.+ |. |+++|+.+
T Consensus 117 ~viI~G~G~~g~~l~~~L~~~g~-v~vid~~~ 147 (336)
T 1lnq_A 117 HVVICGWSESTLECLRELRGSEV-FVLAEDEN 147 (336)
T ss_dssp EEEEESCCHHHHHHHTTGGGSCE-EEEESCGG
T ss_pred CEEEECCcHHHHHHHHHHHhCCc-EEEEeCCh
Confidence 59999999999999999998 89 99999875
No 494
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=46.84 E-value=10 Score=37.97 Aligned_cols=33 Identities=12% Similarity=0.266 Sum_probs=29.7
Q ss_pred cccEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 80 AFDYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 80 ~~DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
.-.|.|||.|.-|...|..|++ |++|.+.++.+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999 99999998764
No 495
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=46.64 E-value=10 Score=37.45 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=27.5
Q ss_pred ccEEEECCCCchHHHHHhhhc-cC--eeeEeecC
Q 007210 81 FDYIVVGGGTAGCPLAATLSQ-NF--TVLLLERG 111 (612)
Q Consensus 81 ~DvIVVGsG~aG~~aA~~Lae-g~--~VlvLEkG 111 (612)
--|.|||+|.-|..+|..|+. |. .|.+++..
T Consensus 22 ~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 22 NKITVVGCDAVGMADAISVLMKDLADEVALVDVM 55 (330)
T ss_dssp CEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECC
Confidence 359999999999999999999 75 89999974
No 496
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=46.57 E-value=25 Score=35.77 Aligned_cols=44 Identities=14% Similarity=0.135 Sum_probs=31.1
Q ss_pred cCCCCcEEEeccEEEEEEecCCCCCCeEEEEEEEeCCCCeEEEEeecCCCceEEecCCC
Q 007210 255 ANPQKITVLIRATVQKIVFDTSGKRPKAVGVIFKDENGNQHQAFLAGNPKSEVILSCGA 313 (612)
Q Consensus 255 a~~~g~~v~~~~~V~~l~~~~~g~~~~v~GV~~~~~~g~~~~v~~~~~a~k~VILaaG~ 313 (612)
+++.+ +|+++++|++|..+++ .++ |.+ .+|+. +. ++.||+|+|.
T Consensus 214 ~~~~g-~i~~~~~V~~i~~~~~----~v~-v~~--~~g~~--~~-----ad~vi~a~~~ 257 (431)
T 3k7m_X 214 SQEIP-EIRLQTVVTGIDQSGD----VVN-VTV--KDGHA--FQ-----AHSVIVATPM 257 (431)
T ss_dssp HTTCS-CEESSCCEEEEECSSS----SEE-EEE--TTSCC--EE-----EEEEEECSCG
T ss_pred HhhCC-ceEeCCEEEEEEEcCC----eEE-EEE--CCCCE--EE-----eCEEEEecCc
Confidence 35567 9999999999987754 433 444 46653 22 4899999974
No 497
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=46.48 E-value=12 Score=34.56 Aligned_cols=30 Identities=23% Similarity=0.439 Sum_probs=26.9
Q ss_pred EEEEC-CCCchHHHHHhhhc-cC--eeeEeecCC
Q 007210 83 YIVVG-GGTAGCPLAATLSQ-NF--TVLLLERGG 112 (612)
Q Consensus 83 vIVVG-sG~aG~~aA~~Lae-g~--~VlvLEkG~ 112 (612)
++|.| +|..|..+|.+|++ |. +|+++.+.+
T Consensus 21 vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~ 54 (242)
T 2bka_A 21 VFILGASGETGRVLLKEILEQGLFSKVTLIGRRK 54 (242)
T ss_dssp EEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred EEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCC
Confidence 89999 58899999999999 98 999998865
No 498
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=46.48 E-value=11 Score=37.28 Aligned_cols=31 Identities=23% Similarity=0.334 Sum_probs=28.4
Q ss_pred cEEEECCCCchHHHHHhhhc-cCeeeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFTVLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~VlvLEkG~ 112 (612)
-+.|||.|..|..+|.+|+. |.+|++.++.+
T Consensus 152 ~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~ 183 (334)
T 2dbq_A 152 TIGIIGLGRIGQAIAKRAKGFNMRILYYSRTR 183 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEEccCHHHHHHHHHHHhCCCEEEEECCCc
Confidence 59999999999999999999 99999998754
No 499
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=46.43 E-value=10 Score=36.02 Aligned_cols=31 Identities=26% Similarity=0.460 Sum_probs=27.5
Q ss_pred cEEEECCCCchHHHHHhhhc-cCe-eeEeecCC
Q 007210 82 DYIVVGGGTAGCPLAATLSQ-NFT-VLLLERGG 112 (612)
Q Consensus 82 DvIVVGsG~aG~~aA~~Lae-g~~-VlvLEkG~ 112 (612)
-+.|||+|.-|...|..|++ |.+ |.+.++.+
T Consensus 12 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred eEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 59999999999999999999 988 88888753
No 500
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=46.33 E-value=15 Score=35.31 Aligned_cols=32 Identities=25% Similarity=0.365 Sum_probs=27.5
Q ss_pred cccEEEECCC-CchHHHHHhhhc-cCeeeEeecC
Q 007210 80 AFDYIVVGGG-TAGCPLAATLSQ-NFTVLLLERG 111 (612)
Q Consensus 80 ~~DvIVVGsG-~aG~~aA~~Lae-g~~VlvLEkG 111 (612)
.-.++|||.| ..|..+|..|.. |.+|.++.+-
T Consensus 160 Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~ 193 (285)
T 3p2o_A 160 GKDAVIIGASNIVGRPMATMLLNAGATVSVCHIK 193 (285)
T ss_dssp TCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCC
Confidence 4589999965 589999999999 9999999764
Done!