Query 007211
Match_columns 612
No_of_seqs 448 out of 2737
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 20:28:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007211.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007211hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 2.4E-77 5.2E-82 627.6 39.2 400 165-607 41-452 (452)
2 PLN02533 probable purple acid 100.0 8.5E-70 1.8E-74 589.1 43.4 378 164-600 39-425 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 2.7E-47 5.7E-52 396.3 31.6 282 285-592 3-294 (294)
4 PTZ00422 glideosome-associated 100.0 4.5E-33 9.8E-38 293.4 27.4 270 285-597 25-334 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 6.5E-31 1.4E-35 271.0 24.2 247 287-582 1-277 (277)
6 cd07395 MPP_CSTP1 Homo sapiens 99.9 2.3E-26 5.1E-31 235.4 22.5 240 285-577 3-260 (262)
7 KOG2679 Purple (tartrate-resis 99.9 5.6E-26 1.2E-30 221.9 18.8 259 283-593 40-330 (336)
8 cd07402 MPP_GpdQ Enterobacter 99.9 1.7E-22 3.6E-27 203.8 20.8 229 288-569 1-238 (240)
9 cd07396 MPP_Nbla03831 Homo sap 99.9 7.9E-22 1.7E-26 202.6 20.5 207 287-539 1-246 (267)
10 PF09423 PhoD: PhoD-like phosp 99.9 2.7E-21 5.8E-26 213.2 21.4 310 237-576 60-453 (453)
11 PRK11148 cyclic 3',5'-adenosin 99.8 1.5E-19 3.3E-24 186.5 24.3 239 285-578 13-260 (275)
12 COG3540 PhoD Phosphodiesterase 99.8 3.6E-20 7.8E-25 194.4 16.2 297 172-504 41-419 (522)
13 cd07401 MPP_TMEM62_N Homo sapi 99.8 2.2E-19 4.8E-24 183.3 18.6 195 289-509 2-216 (256)
14 cd07399 MPP_YvnB Bacillus subt 99.8 6.4E-19 1.4E-23 175.1 15.6 160 287-507 1-165 (214)
15 cd00842 MPP_ASMase acid sphing 99.7 2.7E-16 5.8E-21 164.0 17.0 180 315-506 57-264 (296)
16 cd07383 MPP_Dcr2 Saccharomyces 99.6 3.3E-15 7.1E-20 146.8 16.4 166 286-507 2-180 (199)
17 PF00149 Metallophos: Calcineu 99.6 4.7E-16 1E-20 144.6 9.9 197 287-503 1-200 (200)
18 cd08163 MPP_Cdc1 Saccharomyces 99.6 2.8E-15 6.1E-20 152.7 15.1 161 325-506 44-231 (257)
19 cd07393 MPP_DR1119 Deinococcus 99.6 7.1E-15 1.5E-19 148.0 14.6 201 289-537 1-226 (232)
20 TIGR03767 P_acnes_RR metalloph 99.6 2.6E-13 5.5E-18 146.1 24.1 98 405-506 290-395 (496)
21 PF14008 Metallophos_C: Iron/z 99.5 2.1E-14 4.5E-19 113.9 7.0 62 527-588 1-62 (62)
22 cd07392 MPP_PAE1087 Pyrobaculu 99.5 4E-13 8.8E-18 129.7 16.6 168 289-504 1-174 (188)
23 TIGR03729 acc_ester putative p 99.4 2.5E-12 5.3E-17 130.1 17.0 185 288-504 1-222 (239)
24 COG1409 Icc Predicted phosphoh 99.4 5.2E-12 1.1E-16 130.5 17.3 184 287-503 1-193 (301)
25 TIGR03768 RPA4764 metallophosp 99.4 9.4E-12 2E-16 132.8 19.3 97 405-503 291-411 (492)
26 cd07385 MPP_YkuE_C Bacillus su 99.4 2.3E-12 5E-17 128.4 14.0 198 287-539 2-206 (223)
27 cd07400 MPP_YydB Bacillus subt 99.4 2.7E-12 5.8E-17 119.1 13.2 125 289-506 1-128 (144)
28 cd07388 MPP_Tt1561 Thermus the 99.3 4.6E-11 1E-15 119.0 18.4 174 286-501 4-189 (224)
29 cd07404 MPP_MS158 Microscilla 99.3 1.3E-11 2.8E-16 117.5 10.9 149 289-504 1-150 (166)
30 cd00840 MPP_Mre11_N Mre11 nucl 99.3 3.6E-11 7.7E-16 119.5 14.3 197 288-505 1-203 (223)
31 PRK11340 phosphodiesterase Yae 99.3 7.2E-11 1.6E-15 121.7 15.7 170 285-511 48-222 (271)
32 PF12850 Metallophos_2: Calcin 99.1 1.1E-09 2.3E-14 102.5 14.3 153 287-566 1-153 (156)
33 KOG1432 Predicted DNA repair e 99.1 7.8E-09 1.7E-13 105.7 19.8 88 284-372 51-147 (379)
34 cd00838 MPP_superfamily metall 99.1 2.3E-09 5.1E-14 95.7 12.6 96 324-507 24-119 (131)
35 COG1408 Predicted phosphohydro 99.0 3E-09 6.6E-14 109.8 12.9 78 284-373 42-119 (284)
36 cd00841 MPP_YfcE Escherichia c 99.0 2.2E-08 4.8E-13 94.0 15.8 59 288-372 1-59 (155)
37 cd07379 MPP_239FB Homo sapiens 98.8 2.8E-08 6E-13 91.4 11.4 117 288-504 1-117 (135)
38 cd07397 MPP_DevT Myxococcus xa 98.8 1.2E-07 2.7E-12 95.0 15.7 64 287-373 1-64 (238)
39 cd08166 MPP_Cdc1_like_1 unchar 98.8 1.4E-08 3.1E-13 98.5 8.6 48 325-372 41-93 (195)
40 cd07394 MPP_Vps29 Homo sapiens 98.8 8.5E-07 1.8E-11 85.7 20.6 65 288-372 1-65 (178)
41 TIGR00040 yfcE phosphoesterase 98.7 2.7E-07 5.8E-12 87.2 15.3 63 287-371 1-63 (158)
42 PRK05340 UDP-2,3-diacylglucosa 98.7 3.9E-08 8.5E-13 99.6 10.0 182 287-505 1-201 (241)
43 COG2129 Predicted phosphoester 98.7 1.5E-06 3.4E-11 85.0 19.2 176 286-505 3-189 (226)
44 cd08165 MPP_MPPE1 human MPPE1 98.7 1.8E-07 3.8E-12 88.4 12.2 56 316-372 29-89 (156)
45 PF14582 Metallophos_3: Metall 98.7 1.1E-07 2.3E-12 92.7 10.3 177 287-504 6-219 (255)
46 cd07403 MPP_TTHA0053 Thermus t 98.6 2.2E-07 4.8E-12 84.9 9.6 49 452-506 58-106 (129)
47 KOG3770 Acid sphingomyelinase 98.6 6.3E-07 1.4E-11 98.4 13.4 175 315-504 199-405 (577)
48 COG1768 Predicted phosphohydro 98.6 9.5E-07 2.1E-11 82.7 12.4 147 325-507 42-203 (230)
49 cd07384 MPP_Cdc1_like Saccharo 98.5 2.1E-07 4.5E-12 89.3 8.3 57 315-372 35-100 (171)
50 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 1.1E-06 2.4E-11 88.5 13.7 74 290-372 2-81 (231)
51 cd07389 MPP_PhoD Bacillus subt 98.5 2E-07 4.4E-12 93.3 6.8 138 325-506 28-207 (228)
52 TIGR00583 mre11 DNA repair pro 98.5 4E-06 8.8E-11 90.7 17.0 84 286-372 3-123 (405)
53 PRK09453 phosphodiesterase; Pr 98.5 1.1E-05 2.4E-10 78.0 18.1 71 287-372 1-76 (182)
54 cd00845 MPP_UshA_N_like Escher 98.4 3.5E-06 7.7E-11 85.6 14.4 80 287-373 1-83 (252)
55 cd08164 MPP_Ted1 Saccharomyces 98.4 1.6E-06 3.5E-11 84.2 10.1 49 324-373 42-112 (193)
56 cd07410 MPP_CpdB_N Escherichia 98.4 1.5E-05 3.4E-10 82.3 17.5 198 287-504 1-231 (277)
57 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.3 1.8E-05 3.8E-10 81.1 14.8 191 289-509 1-235 (262)
58 cd07398 MPP_YbbF-LpxH Escheric 98.2 3.9E-06 8.4E-11 83.2 9.2 74 290-372 1-82 (217)
59 cd07406 MPP_CG11883_N Drosophi 98.2 1.5E-05 3.2E-10 81.6 13.3 186 287-504 1-208 (257)
60 cd07382 MPP_DR1281 Deinococcus 98.2 8.4E-05 1.8E-09 75.8 18.3 194 288-540 1-201 (255)
61 TIGR00282 metallophosphoestera 98.0 0.00023 5E-09 72.9 17.5 198 287-540 1-204 (266)
62 cd07412 MPP_YhcR_N Bacillus su 98.0 0.00037 8E-09 72.6 18.8 85 287-373 1-89 (288)
63 cd07411 MPP_SoxB_N Thermus the 98.0 7.9E-05 1.7E-09 76.5 12.7 190 287-504 1-220 (264)
64 COG0622 Predicted phosphoester 97.9 0.00064 1.4E-08 65.1 17.1 64 287-372 2-65 (172)
65 TIGR00619 sbcd exonuclease Sbc 97.9 2.9E-05 6.2E-10 79.4 7.7 83 287-372 1-88 (253)
66 cd07425 MPP_Shelphs Shewanella 97.9 3E-05 6.5E-10 76.8 7.7 65 290-372 1-80 (208)
67 COG0420 SbcD DNA repair exonuc 97.8 3.3E-05 7.2E-10 83.9 7.5 83 287-372 1-88 (390)
68 cd07405 MPP_UshA_N Escherichia 97.8 0.00029 6.3E-09 73.2 14.0 50 448-504 173-222 (285)
69 cd07407 MPP_YHR202W_N Saccharo 97.8 0.00048 1E-08 71.4 15.0 198 286-503 5-231 (282)
70 KOG3662 Cell division control 97.8 9.2E-05 2E-09 79.1 9.7 125 284-425 46-182 (410)
71 cd07408 MPP_SA0022_N Staphyloc 97.8 0.00033 7.1E-09 71.7 13.4 80 287-373 1-83 (257)
72 PRK10966 exonuclease subunit S 97.7 8.3E-05 1.8E-09 81.0 8.2 83 287-372 1-87 (407)
73 PHA02546 47 endonuclease subun 97.7 8.3E-05 1.8E-09 79.3 7.8 83 287-372 1-89 (340)
74 cd07409 MPP_CD73_N CD73 ecto-5 97.7 0.0008 1.7E-08 69.8 14.1 79 407-504 131-219 (281)
75 cd07380 MPP_CWF19_N Schizosacc 97.6 0.00018 3.8E-09 67.5 8.1 54 315-370 15-68 (150)
76 COG2908 Uncharacterized protei 97.6 0.0001 2.2E-09 73.1 6.5 72 291-372 2-80 (237)
77 PRK09419 bifunctional 2',3'-cy 97.6 0.00075 1.6E-08 83.1 15.2 196 283-504 657-883 (1163)
78 PRK09558 ushA bifunctional UDP 97.6 0.0011 2.4E-08 75.4 14.7 200 284-504 32-258 (551)
79 COG0737 UshA 5'-nucleotidase/2 97.3 0.0011 2.4E-08 74.8 10.5 203 282-503 22-247 (517)
80 cd07391 MPP_PF1019 Pyrococcus 97.1 0.00094 2E-08 64.0 6.5 56 316-372 32-88 (172)
81 TIGR01530 nadN NAD pyrophospha 97.1 0.0081 1.8E-07 68.3 14.3 78 407-504 130-219 (550)
82 cd07386 MPP_DNA_pol_II_small_a 97.0 0.0014 3E-08 66.5 6.9 76 290-372 2-94 (243)
83 PRK00166 apaH diadenosine tetr 97.0 0.0016 3.4E-08 67.3 7.4 65 288-372 2-69 (275)
84 cd07423 MPP_PrpE Bacillus subt 97.0 0.0016 3.5E-08 65.7 7.2 67 288-372 2-80 (234)
85 cd07390 MPP_AQ1575 Aquifex aeo 97.0 0.0012 2.6E-08 63.0 5.9 77 290-372 2-82 (168)
86 TIGR00024 SbcD_rel_arch putati 97.0 0.0014 3E-08 65.7 6.3 84 287-372 15-102 (225)
87 PHA02239 putative protein phos 96.9 0.0018 3.9E-08 65.4 6.8 67 288-372 2-73 (235)
88 PRK04036 DNA polymerase II sma 96.8 0.0034 7.3E-08 70.4 8.7 82 284-372 241-343 (504)
89 cd07424 MPP_PrpA_PrpB PrpA and 96.8 0.0028 6.2E-08 62.6 7.1 63 288-372 2-67 (207)
90 PRK13625 bis(5'-nucleosyl)-tet 96.8 0.003 6.5E-08 64.2 7.4 66 288-371 2-78 (245)
91 cd07413 MPP_PA3087 Pseudomonas 96.7 0.0044 9.5E-08 62.0 7.2 66 289-372 1-76 (222)
92 cd08162 MPP_PhoA_N Synechococc 96.6 0.023 4.9E-07 59.9 12.4 39 447-504 206-245 (313)
93 PRK11907 bifunctional 2',3'-cy 96.6 0.026 5.7E-07 66.4 13.8 96 276-373 105-214 (814)
94 COG4186 Predicted phosphoester 96.6 0.046 9.9E-07 50.8 12.2 80 288-372 5-86 (186)
95 PRK11439 pphA serine/threonine 96.5 0.0056 1.2E-07 61.1 6.8 63 288-372 18-83 (218)
96 PRK09968 serine/threonine-spec 96.4 0.0078 1.7E-07 60.1 7.0 63 287-371 15-80 (218)
97 COG5555 Cytolysin, a secreted 96.4 0.0025 5.5E-08 64.2 3.4 173 329-505 129-336 (392)
98 PRK09419 bifunctional 2',3'-cy 96.3 0.033 7.1E-07 68.9 13.2 48 447-504 233-281 (1163)
99 PF13277 YmdB: YmdB-like prote 96.3 0.055 1.2E-06 54.6 12.2 171 325-540 26-199 (253)
100 cd07422 MPP_ApaH Escherichia c 96.3 0.0098 2.1E-07 60.8 7.0 63 290-372 2-67 (257)
101 cd07387 MPP_PolD2_C PolD2 (DNA 96.2 0.15 3.2E-06 52.1 14.9 138 289-443 2-176 (257)
102 cd07421 MPP_Rhilphs Rhilph pho 96.2 0.015 3.3E-07 60.1 7.8 70 288-372 3-80 (304)
103 PF00041 fn3: Fibronectin type 96.0 0.02 4.3E-07 47.0 6.6 74 168-262 2-77 (85)
104 PRK09418 bifunctional 2',3'-cy 96.0 0.13 2.8E-06 60.6 15.1 54 286-340 39-97 (780)
105 cd00144 MPP_PPP_family phospho 95.9 0.019 4.1E-07 57.1 6.9 65 290-372 1-68 (225)
106 cd07381 MPP_CapA CapA and rela 95.8 0.18 3.8E-06 50.9 13.5 61 435-506 162-222 (239)
107 KOG4221 Receptor mediating net 95.8 0.25 5.5E-06 59.0 16.1 136 125-279 570-712 (1381)
108 COG1692 Calcineurin-like phosp 95.7 0.32 6.9E-06 48.7 14.4 198 287-539 1-202 (266)
109 TIGR01390 CycNucDiestase 2',3' 95.7 0.13 2.7E-06 59.5 13.2 85 287-373 3-100 (626)
110 KOG2863 RNA lariat debranching 95.6 0.066 1.4E-06 55.9 9.4 181 287-502 1-229 (456)
111 TIGR00668 apaH bis(5'-nucleosy 95.4 0.034 7.4E-07 57.3 6.8 65 288-372 2-69 (279)
112 PRK09420 cpdB bifunctional 2', 95.4 0.23 5E-06 57.6 14.4 87 285-373 24-123 (649)
113 smart00854 PGA_cap Bacterial c 95.2 0.31 6.8E-06 49.2 13.0 59 437-506 162-220 (239)
114 COG1407 Predicted ICC-like pho 94.7 0.089 1.9E-06 52.7 7.2 83 287-372 20-110 (235)
115 cd07420 MPP_RdgC Drosophila me 94.6 0.088 1.9E-06 55.5 7.2 67 288-372 52-123 (321)
116 KOG0196 Tyrosine kinase, EPH ( 94.2 0.59 1.3E-05 53.9 12.9 40 241-280 498-537 (996)
117 cd07416 MPP_PP2B PP2B, metallo 93.6 0.2 4.3E-06 52.7 7.4 67 288-372 44-114 (305)
118 PTZ00480 serine/threonine-prot 93.2 1.3 2.8E-05 46.8 12.7 25 478-502 229-253 (320)
119 cd00063 FN3 Fibronectin type 3 93.1 0.78 1.7E-05 36.8 9.0 38 239-276 55-92 (93)
120 cd07418 MPP_PP7 PP7, metalloph 92.8 0.26 5.7E-06 53.0 7.0 67 288-372 67-138 (377)
121 smart00156 PP2Ac Protein phosp 92.3 0.47 1E-05 49.0 7.9 67 288-372 29-99 (271)
122 KOG3325 Membrane coat complex 92.2 1.5 3.3E-05 40.5 10.0 86 480-592 96-182 (183)
123 cd07415 MPP_PP2A_PP4_PP6 PP2A, 91.9 0.42 9.1E-06 49.7 7.1 24 479-502 213-236 (285)
124 KOG2310 DNA repair exonuclease 91.6 0.29 6.2E-06 53.9 5.6 54 285-341 12-67 (646)
125 cd07419 MPP_Bsu1_C Arabidopsis 91.6 0.53 1.1E-05 49.6 7.5 23 478-500 240-262 (311)
126 cd07414 MPP_PP1_PPKL PP1, PPKL 91.3 0.52 1.1E-05 49.2 7.0 24 479-502 221-244 (293)
127 COG1311 HYS2 Archaeal DNA poly 91.2 0.73 1.6E-05 50.5 8.0 82 285-372 224-321 (481)
128 KOG3513 Neural cell adhesion m 91.0 13 0.00028 45.0 18.5 191 50-280 719-916 (1051)
129 cd07417 MPP_PP5_C PP5, C-termi 90.7 0.69 1.5E-05 48.8 7.3 24 479-502 232-255 (316)
130 PTZ00239 serine/threonine prot 90.5 0.76 1.6E-05 48.2 7.3 24 479-502 214-237 (303)
131 PTZ00244 serine/threonine-prot 89.9 0.73 1.6E-05 48.2 6.5 24 479-502 223-246 (294)
132 PF07888 CALCOCO1: Calcium bin 88.0 4 8.7E-05 45.8 11.0 93 64-178 22-124 (546)
133 KOG4419 5' nucleotidase [Nucle 86.3 3.4 7.4E-05 46.5 9.1 56 431-502 211-268 (602)
134 PF09587 PGA_cap: Bacterial ca 86.1 2 4.4E-05 43.6 7.0 64 433-507 169-232 (250)
135 smart00060 FN3 Fibronectin typ 86.0 5.4 0.00012 30.6 8.2 22 240-261 56-77 (83)
136 KOG4221 Receptor mediating net 84.1 25 0.00053 43.0 15.2 126 124-279 479-612 (1381)
137 PF10179 DUF2369: Uncharacteri 81.8 21 0.00045 37.4 12.1 19 243-261 262-280 (300)
138 PF04042 DNA_pol_E_B: DNA poly 81.8 2.7 5.8E-05 41.2 5.6 74 289-372 1-91 (209)
139 KOG3947 Phosphoesterases [Gene 80.0 4 8.6E-05 41.7 6.0 64 286-373 61-127 (305)
140 PTZ00235 DNA polymerase epsilo 69.3 22 0.00049 36.9 8.4 76 285-371 26-121 (291)
141 KOG2476 Uncharacterized conser 57.3 19 0.00041 39.4 5.5 70 287-369 6-75 (528)
142 KOG0372 Serine/threonine speci 48.2 50 0.0011 33.4 6.4 66 289-372 45-114 (303)
143 TIGR02855 spore_yabG sporulati 37.7 55 0.0012 33.7 4.9 50 435-502 115-165 (283)
144 PF09294 Interfer-bind: Interf 37.1 43 0.00093 28.6 3.7 19 242-260 68-86 (106)
145 KOG0374 Serine/threonine speci 36.2 49 0.0011 35.2 4.6 23 479-501 232-254 (331)
146 KOG3513 Neural cell adhesion m 34.5 2.4E+02 0.0053 34.6 10.3 112 127-261 577-694 (1051)
147 PF05582 Peptidase_U57: YabG p 31.5 79 0.0017 32.7 5.0 50 435-502 116-166 (287)
148 KOG0373 Serine/threonine speci 30.6 50 0.0011 32.8 3.3 65 289-372 48-117 (306)
149 KOG0371 Serine/threonine prote 29.9 1.3E+02 0.0027 30.9 6.0 66 289-372 62-131 (319)
150 cd02856 Glycogen_debranching_e 29.9 71 0.0015 27.5 3.9 24 237-260 43-66 (103)
151 PF07353 Uroplakin_II: Uroplak 27.9 86 0.0019 29.6 4.1 18 244-261 105-122 (184)
152 cd01987 USP_OKCHK USP domain i 27.5 3.1E+02 0.0067 23.6 7.8 23 480-502 74-96 (124)
153 KOG4258 Insulin/growth factor 27.0 2.5E+02 0.0053 33.6 8.3 116 169-295 489-623 (1025)
154 TIGR02039 CysD sulfate adenyly 26.9 2.2E+02 0.0048 29.8 7.5 81 416-502 50-130 (294)
155 PF00879 Defensin_propep: Defe 26.4 1.4E+02 0.003 22.8 4.2 15 58-72 36-50 (52)
156 cd02853 MTHase_N_term Maltooli 26.3 88 0.0019 25.8 3.7 21 238-259 39-59 (85)
157 cd02860 Pullulanase_N_term Pul 24.7 95 0.0021 26.4 3.7 24 237-260 45-68 (100)
158 cd02852 Isoamylase_N_term Isoa 24.7 89 0.0019 27.6 3.7 22 238-259 48-69 (119)
159 PF06874 FBPase_2: Firmicute f 22.7 58 0.0012 37.3 2.4 50 317-373 176-225 (640)
160 COG2248 Predicted hydrolase (m 20.2 2.4E+02 0.0052 28.9 5.9 73 286-373 176-251 (304)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-77 Score=627.61 Aligned_cols=400 Identities=41% Similarity=0.716 Sum_probs=331.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCcccc-CcceEEecCCcCCCCccceeccCCCeEEEE
Q 007211 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSP-AGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~-~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
..+.|+|+||++++..++|+|+|.|.+. ....|+||...+...... .+.. ..+|+.... +|+..|++|+|
T Consensus 41 ~~~~peQvhlS~~~~~~~m~VswvT~~~---~~~~V~Yg~~~~~~~~~~~~~~~----~~~~~~y~~--~~~~sg~ih~~ 111 (452)
T KOG1378|consen 41 VVNSPEQVHLSFTDNLNEMRVSWVTGDG---EENVVRYGEVKDKLDNSAARGMT----EAWTDGYAN--GWRDSGYIHDA 111 (452)
T ss_pred cCCCCCeEEEeccCCCCcEEEEEeCCCC---CCceEEEeecCCCccccccccce----EEEeccccc--ccceeeeEeee
Confidence 3468999999999998899999999864 348999997654422221 1111 112333222 56789999999
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh
Q 007211 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD 323 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~ 323 (612)
+|++|+|+|+||||||++ ..||++++|+|+| +++.+.+|+++||||...... ++.....+
T Consensus 112 ~~~~L~~~t~YyY~~Gs~-----~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~-------------s~~~~~~~ 171 (452)
T KOG1378|consen 112 VMKNLEPNTRYYYQVGSD-----LKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT-------------STLRNQEE 171 (452)
T ss_pred eecCCCCCceEEEEeCCC-----CCcccceEeECCC--CccCceeEEEEcccccccccc-------------chHhHHhc
Confidence 999999999999999985 3499999999998 455789999999999876421 23333333
Q ss_pred cCCccEEEEeCcccccCCch-hHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCC
Q 007211 324 LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE 402 (612)
Q Consensus 324 ~~~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~ 402 (612)
..++|+|||+|||+|++++. .+||+|++++||+++.+|||++.||||++++... |+.+|..||.||.+
T Consensus 172 ~~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-----------~F~~y~~Rf~mP~~ 240 (452)
T KOG1378|consen 172 NLKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-----------CFVPYSARFNMPGN 240 (452)
T ss_pred ccCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc-----------cccccceeeccCCC
Confidence 34799999999999999998 6999999999999999999999999999876542 55789999999954
Q ss_pred ---CCCceEEEEEeCCEEEEEEeCCCCC--CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCcc-ccCCCCCCc
Q 007211 403 ---NRAKFWYSTDYGMFRFCVADTEHDW--REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIF-YAVDGSFAE 476 (612)
Q Consensus 403 ---~~~~~~Ysfd~G~v~fi~Ldt~~~~--~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~-~~~~~~~~~ 476 (612)
...++|||||+|++|||+|+|+.++ ..+.+|++||+++|++++|+++||+||+.|+|+ |++... +..++.. +
T Consensus 241 ~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~-Y~S~~~~~~reG~~-~ 318 (452)
T KOG1378|consen 241 SSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPM-YCSSNDAHYREGEF-E 318 (452)
T ss_pred cCCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccc-eecCCchhhccCcc-h
Confidence 3456999999999999999999885 356899999999999999877999999999999 666542 3344432 2
Q ss_pred hhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCC--CCCCCCCCCCccee
Q 007211 477 PMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAG--LAEFTPLQTTWSLY 554 (612)
Q Consensus 477 ~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~--l~~~~~~~~~ws~~ 554 (612)
.+ |..||+||.+++||++|+||+|.|||+||++|.+|.......+..++.+||||++|.||+. +..+..++|+||+|
T Consensus 319 ~~-~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~ 397 (452)
T KOG1378|consen 319 SM-REGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAF 397 (452)
T ss_pred hh-HHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcccCCCCccccc
Confidence 44 7899999999999999999999999999999999987666555568899999999999954 56666689999999
Q ss_pred eeCceeEEEEEEecCCeEEEEEEEC--CCCcEEEEEEEEeCCCCccccccCCCCC
Q 007211 555 RDYDYGFVKLTAFDHSNLLFEYKKS--SDGKVYDSFRISRDYRDILACTVGSCPS 607 (612)
Q Consensus 555 ~~~~~Gy~~l~v~n~~~l~~~~~~~--~dG~v~D~f~i~k~~~~~~~~~~~~~~~ 607 (612)
|..+|||++|+++|+|++.++++++ .+|+++|+|||.|++.+...|....|.+
T Consensus 398 R~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~~~~~~~~ 452 (452)
T KOG1378|consen 398 REGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVGVLLGCIP 452 (452)
T ss_pred ccccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccccccccccCC
Confidence 9999999999999999999999985 3478999999999999999999988863
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=8.5e-70 Score=589.12 Aligned_cols=378 Identities=25% Similarity=0.443 Sum_probs=309.6
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCc-ceEEecCCcCCCCccceeccCCCeEEE
Q 007211 164 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAG-TLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 164 ~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~-~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
+++..|+|+||++++ +++|+|+|.|... ..+.|+||++++....++.+ +.+|... ..| .+|++|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~---~~~~V~yG~~~~~l~~~a~g~~~~~~~~---------~~~-~~g~iH~ 104 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDS---IPPSVVYGTVSGKYEGSANGTSSSYHYL---------LIY-RSGQIND 104 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCC---CCCEEEEecCCCCCcceEEEEEEEEecc---------ccc-cCCeEEE
Confidence 578899999999997 8999999999864 46899999987765544433 3456521 123 3799999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH
Q 007211 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ 322 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 322 (612)
|+|+||+|+|+|+||||.. .+|+.++|+|+|.. .++||+++||+|.... ...+++.+.+
T Consensus 105 v~l~~L~p~T~Y~Yrvg~~------~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~------------~~~tl~~i~~ 163 (427)
T PLN02533 105 VVIGPLKPNTVYYYKCGGP------SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEW------------TKSTLEHVSK 163 (427)
T ss_pred EEeCCCCCCCEEEEEECCC------CCccceEEECCCCC---CCeEEEEEEeCCCCcc------------cHHHHHHHHh
Confidence 9999999999999999853 25889999998853 4699999999985421 1245666654
Q ss_pred hcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCC
Q 007211 323 DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAE 402 (612)
Q Consensus 323 ~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~ 402 (612)
.+||||||+||++|++++..+|+.|++.++++.+.+|+|+++||||.+... ....+...+|..+|.||.+
T Consensus 164 --~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~--------~~~~~~f~~y~~rf~mP~~ 233 (427)
T PLN02533 164 --WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP--------ILHPEKFTAYNARWRMPFE 233 (427)
T ss_pred --cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccc--------cccCcCccchhhcccCCcc
Confidence 689999999999999988899999999999999999999999999986321 0112234567789999953
Q ss_pred ---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhh
Q 007211 403 ---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMG 479 (612)
Q Consensus 403 ---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~ 479 (612)
...+.||||++|++|||+||++.++...++|++||+++|++++|+++||+||++|+|+ |++...+..+. ....+
T Consensus 234 ~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~-y~s~~~~~~~~-~~~~~- 310 (427)
T PLN02533 234 ESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSNEAHQGEK-ESVGM- 310 (427)
T ss_pred ccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCe-eecccccCCcc-hhHHH-
Confidence 2457899999999999999999988888999999999999998888999999999999 87754322111 11234
Q ss_pred HHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCC---CCCCCCCCCcceeee
Q 007211 480 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGL---AEFTPLQTTWSLYRD 556 (612)
Q Consensus 480 r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l---~~~~~~~~~ws~~~~ 556 (612)
|+.|++||++++||++|+||+|.|||++|++++++ .+.||+||++|+||+.. ..+..++|+|++||.
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~----------~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~ 380 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYERFDRVYQGKT----------DKCGPVYITIGDGGNREGLATKYIDPKPDISLFRE 380 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecccccccccCCcc----------CCCCCEEEEeCCCccccccccccCCCCCCceeEEe
Confidence 88999999999999999999999999999999876 24799999999999864 345567899999999
Q ss_pred CceeEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEeCCCCcccc
Q 007211 557 YDYGFVKLTAFDHSNLLFEYKKSSDGK--VYDSFRISRDYRDILAC 600 (612)
Q Consensus 557 ~~~Gy~~l~v~n~~~l~~~~~~~~dG~--v~D~f~i~k~~~~~~~~ 600 (612)
.+|||.+|++.|.++|++||+++.+|+ +.|+|||+|-... -+|
T Consensus 381 ~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~-~~~ 425 (427)
T PLN02533 381 ASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTE-PGC 425 (427)
T ss_pred ccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccCC-Ccc
Confidence 999999999999999999999977764 8999999997554 344
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=2.7e-47 Score=396.32 Aligned_cols=282 Identities=39% Similarity=0.692 Sum_probs=223.2
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCch--hHHHHHHHhhhhhhcCCCe
Q 007211 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~--~~wd~f~~~i~~l~s~vP~ 362 (612)
.++||+++||+|.... .+.+++++++++..+|||||++||++|+.+.. .+|+.|++.++++.+.+|+
T Consensus 3 ~~~~f~v~gD~~~~~~-----------~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 71 (294)
T cd00839 3 TPFKFAVFGDMGQNTN-----------NSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPY 71 (294)
T ss_pred CcEEEEEEEECCCCCC-----------CcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCc
Confidence 4699999999997521 23567888877556899999999999988765 8999999999999999999
Q ss_pred EEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecC---CCCCCceEEEEEeCCEEEEEEeCCCCC---CCCHHHHHH
Q 007211 363 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVP---AENRAKFWYSTDYGMFRFCVADTEHDW---REGTEQYKF 436 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P---~~~~~~~~Ysfd~G~v~fi~Ldt~~~~---~~~~~Q~~W 436 (612)
|+++||||+.......+... ...++.++ .....+.||+|++|++|||+|||+... ....+|++|
T Consensus 72 ~~~~GNHD~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 72 MVTPGNHEADYNFSFYKIKA----------FFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred EEcCcccccccCCCCccccc----------ccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999875332111100 00012222 223467899999999999999998765 567899999
Q ss_pred HHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceecc
Q 007211 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTN 516 (612)
Q Consensus 437 L~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~ 516 (612)
|+++|+++++.+.+|+||++|+|+ |++....... ...... ++.|++||++|+|+++|+||+|.|||++|+++++|.
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~-~~~~~~-~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~- 217 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPM-YCSNTDHDDC-IEGEKM-RAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV- 217 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCc-EecCcccccc-chhHHH-HHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec-
Confidence 999999987666799999999999 7764432111 011223 889999999999999999999999999999999886
Q ss_pred CCCccccCCCCceEEEEeCCCCCCCCCCCCC--CCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCcEEEEEEEEe
Q 007211 517 KEKNYYKGTLNGTIHVVAGGGGAGLAEFTPL--QTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRISR 592 (612)
Q Consensus 517 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~--~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f~i~k 592 (612)
.......+++|++||++|+||+.++..... .++|+.++..++||++|++.++++|+++++.+.+|+|+|+|+|+|
T Consensus 218 -~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~i~k 294 (294)
T cd00839 218 -GDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFWIIK 294 (294)
T ss_pred -cccccccCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEEEeC
Confidence 222222367899999999999988654332 358999999999999999988789999999999999999999987
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=4.5e-33 Score=293.44 Aligned_cols=270 Identities=18% Similarity=0.267 Sum_probs=189.5
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCc----hhHHHH-HHHhhhhhh--
Q 007211 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQ-FTAQIEPIA-- 357 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~----~~~wd~-f~~~i~~l~-- 357 (612)
..++|+++||+|.+.. -|....+.|.++.++ .++|||+.+||+. .+|. +.+|+. |.+.+....
T Consensus 25 ~~l~F~~vGDwG~g~~--------~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~ 94 (394)
T PTZ00422 25 AQLRFASLGNWGTGSK--------QQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGD 94 (394)
T ss_pred CeEEEEEEecCCCCch--------hHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchh
Confidence 3589999999996421 133333445555544 6899999999998 5553 456664 333333333
Q ss_pred cCCCeEEcCCCCccCCCCCCC--CCCCC----CCCC--cc--ccccceeeecCCCCCCceEEEE----Ee----------
Q 007211 358 STVPYMIASGNHERDWPGTGS--FYGNK----DSGG--EC--GVLAETMFYVPAENRAKFWYST----DY---------- 413 (612)
Q Consensus 358 s~vP~~~v~GNHD~~~~~~~~--~y~~~----dsgg--e~--g~~~~~~f~~P~~~~~~~~Ysf----d~---------- 413 (612)
-++||++++||||+..+.... .|... +.-. +- ......||.||. .||.+ ..
T Consensus 95 L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~~~~~~~~~~~ 169 (394)
T PTZ00422 95 MQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTDTSGPSLLKSG 169 (394)
T ss_pred hCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeeccccccccccc
Confidence 478999999999985322110 11100 0000 00 001146899983 47754 21
Q ss_pred ---CCEEEEEEeCCCC---C--C-CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHH
Q 007211 414 ---GMFRFCVADTEHD---W--R-EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQ 484 (612)
Q Consensus 414 ---G~v~fi~Ldt~~~---~--~-~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~ 484 (612)
..+.||++||... + . ....|++||+++|+.+ ++..+|+||++|||+ ||++.+.+ . ..+ +..|+
T Consensus 170 ~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPI-ySsG~hg~-~----~~L-~~~L~ 241 (394)
T PTZ00422 170 HKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPI-YSSGSSKG-D----SYL-SYYLL 241 (394)
T ss_pred CCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCce-eecCCCCC-C----HHH-HHHHH
Confidence 1289999999631 1 1 2468999999999754 356789999999999 99865421 1 234 78999
Q ss_pred HHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEE
Q 007211 485 KLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKL 564 (612)
Q Consensus 485 ~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l 564 (612)
|||++|+||++|+||+|+|||.. .+++.||++|+||...... ....+|+.|....+||+.+
T Consensus 242 PLL~ky~VdlYisGHDH~lq~i~------------------~~gt~yIvSGaGs~~~~~~-~~~~~~s~F~~~~~GF~~~ 302 (394)
T PTZ00422 242 PLLKDAQVDLYISGYDRNMEVLT------------------DEGTAHINCGSGGNSGRKS-IMKNSKSLFYSEDIGFCIH 302 (394)
T ss_pred HHHHHcCcCEEEEccccceEEec------------------CCCceEEEeCccccccCCC-CCCCCCcceecCCCCEEEE
Confidence 99999999999999999999974 2478999999988764332 2346788888899999999
Q ss_pred EEecCCeEEEEEEECCCCcEEEEEEEEeCCCCc
Q 007211 565 TAFDHSNLLFEYKKSSDGKVYDSFRISRDYRDI 597 (612)
Q Consensus 565 ~v~n~~~l~~~~~~~~dG~v~D~f~i~k~~~~~ 597 (612)
++ +.+.|+++|+.+.+|++++++++.|+.+..
T Consensus 303 ~l-~~~~l~~~fid~~~GkvL~~~~~~~~~~~~ 334 (394)
T PTZ00422 303 EL-NAEGMVTKFVSGNTGEVLYTHKQPLKKRKL 334 (394)
T ss_pred EE-ecCEEEEEEEeCCCCcEEEEeeecccchhh
Confidence 98 889999999966899999999998876643
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.98 E-value=6.5e-31 Score=271.04 Aligned_cols=247 Identities=24% Similarity=0.379 Sum_probs=175.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCch----hHHH-HHHHhhhhhhcCCC
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI----SQWD-QFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~----~~wd-~f~~~i~~l~s~vP 361 (612)
++|+++||+|.... ..|......+.+++++ .+|||||++||++|++|.. .+|. .|.+.++.+..++|
T Consensus 1 ~~f~~~gD~g~~~~-------~~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P 72 (277)
T cd07378 1 LRFLALGDWGGGGT-------AGQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP 72 (277)
T ss_pred CeEEEEeecCCCCC-------HHHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC
Confidence 48999999997521 1122333445555554 6899999999999988742 3343 45555555556899
Q ss_pred eEEcCCCCccCCCCCCC-CCCCCCCCCccccccceeeecCCCCCCceEEEEEeC------CEEEEEEeCCCCC-------
Q 007211 362 YMIASGNHERDWPGTGS-FYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYG------MFRFCVADTEHDW------- 427 (612)
Q Consensus 362 ~~~v~GNHD~~~~~~~~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G------~v~fi~Ldt~~~~------- 427 (612)
+|+++||||........ .|.. .++..+|.+| +.||+|+++ +++||+|||....
T Consensus 73 ~~~v~GNHD~~~~~~~~~~~~~--------~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~ 139 (277)
T cd07378 73 WYLVLGNHDYSGNVSAQIDYTK--------RPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIA 139 (277)
T ss_pred eEEecCCcccCCCchheeehhc--------cCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCcccccc
Confidence 99999999986311100 0000 0012334444 468999998 7999999998531
Q ss_pred --------CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecC
Q 007211 428 --------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGH 499 (612)
Q Consensus 428 --------~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH 499 (612)
..+.+|++||+++|+++ +.+|+||++|+|+ ++..... . .... ++.|++++++++|+++|+||
T Consensus 140 ~~~~~~~~~~~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~-~~~~~~~---~--~~~~-~~~l~~l~~~~~v~~vl~GH 209 (277)
T cd07378 140 SPYGPPNGKLAEEQLAWLEKTLAAS---TADWKIVVGHHPI-YSSGEHG---P--TSCL-VDRLLPLLKKYKVDAYLSGH 209 (277)
T ss_pred ccccCcchhhHHHHHHHHHHHHHhc---CCCeEEEEeCccc-eeCCCCC---C--cHHH-HHHHHHHHHHcCCCEEEeCC
Confidence 13589999999999985 3389999999999 7653321 1 1223 78999999999999999999
Q ss_pred cccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCC---CCCCcceeeeCceeEEEEEEecCCeEEEEE
Q 007211 500 VHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTP---LQTTWSLYRDYDYGFVKLTAFDHSNLLFEY 576 (612)
Q Consensus 500 ~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~---~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~ 576 (612)
+|.+++..+. ..++.||++|+||........ ..++|..++...+||++|++ ++++|+++|
T Consensus 210 ~H~~~~~~~~----------------~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v-~~~~l~~~~ 272 (277)
T cd07378 210 DHNLQHIKDD----------------GSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLEL-TKEELTVRF 272 (277)
T ss_pred cccceeeecC----------------CCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEE-ecCEEEEEE
Confidence 9999988531 248899999998876533321 23468888889999999999 678999999
Q ss_pred EECCCC
Q 007211 577 KKSSDG 582 (612)
Q Consensus 577 ~~~~dG 582 (612)
+ +.||
T Consensus 273 ~-~~~g 277 (277)
T cd07378 273 Y-DADG 277 (277)
T ss_pred E-CCCC
Confidence 8 6665
No 6
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.95 E-value=2.3e-26 Score=235.39 Aligned_cols=240 Identities=17% Similarity=0.169 Sum_probs=161.4
Q ss_pred CCeEEEEEeecCCCCCCCCCcc--cccccchHHHHHHHHHh----cCCccEEEEeCcccccCCch----hHHHHHHHhhh
Q 007211 285 SLQRVVIFGDMGKDEADGSNEY--NDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYI----SQWDQFTAQIE 354 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~--~~~~~~~~~~~~~i~~~----~~~pDfvl~~GDi~Y~~g~~----~~wd~f~~~i~ 354 (612)
.+++|++++|+|.+........ ..| ......++++++. .++||||+++||+++..... .+|+.|.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~-~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEW-DEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhh-hhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHh
Confidence 3699999999999864322111 111 1122334444333 24899999999999765432 45667777777
Q ss_pred hhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC------C
Q 007211 355 PIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW------R 428 (612)
Q Consensus 355 ~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~------~ 428 (612)
.+...+|+++++||||........ ...+|. ...+..||+|++|+++||+|||.... .
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~~~--------------~~~~f~---~~~g~~~y~~~~~~~~~i~lds~~~~~~~~~~~ 144 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPTEE--------------SIKDYR---DVFGDDYFSFWVGGVFFIVLNSQLFFDPSEVPE 144 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCChh--------------HHHHHH---HHhCCcceEEEECCEEEEEeccccccCcccccc
Confidence 666689999999999985321100 001111 01124578999999999999997532 1
Q ss_pred CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCC--CCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007211 429 EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDG--SFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 429 ~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~--~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
...+|++||+++|+++.+.+.+++||++|+|+ +..... ..+. ...... +++|.++|++++|+++|+||+|.+++.
T Consensus 145 ~~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~-~~~~~~~~~~~~-~~~l~~ll~~~~V~~v~~GH~H~~~~~ 221 (262)
T cd07395 145 LAQAQDVWLEEQLEIAKESDCKHVIVFQHIPW-FLEDPD-EEDSYFNIPKSV-RKPLLDKFKKAGVKAVFSGHYHRNAGG 221 (262)
T ss_pred chHHHHHHHHHHHHHHHhccCCcEEEEECcCC-ccCCCC-CCcccCCcCHHH-HHHHHHHHHhcCceEEEECccccCCce
Confidence 24799999999999875445678999999999 643221 1111 111122 789999999999999999999998764
Q ss_pred cccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEE
Q 007211 507 CPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 507 ~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 577 (612)
. .+++.+++++++|..+. ....||..+++ +++.+++||+
T Consensus 222 ~------------------~~g~~~~~~~~~~~~~~-------------~~~~g~~~~~v-~~~~~~~~~~ 260 (262)
T cd07395 222 R------------------YGGLEMVVTSAIGAQLG-------------NDKSGLRIVKV-TEDKIVHEYY 260 (262)
T ss_pred E------------------ECCEEEEEcCceecccC-------------CCCCCcEEEEE-CCCceeeeee
Confidence 2 14677888887775421 13479999999 6778899987
No 7
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=5.6e-26 Score=221.94 Aligned_cols=259 Identities=21% Similarity=0.322 Sum_probs=167.7
Q ss_pred CCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHH-HHHHhhhhhhc---
Q 007211 283 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIAS--- 358 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~s--- 358 (612)
++..++|+++||+|.... |+ |......+..|.++ .++||||.+||++|++|...+.| +|.+.++.+..
T Consensus 40 ~dgslsflvvGDwGr~g~-----~n--qs~va~qmg~ige~-l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pS 111 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGS-----FN--QSQVALQMGEIGEK-LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPS 111 (336)
T ss_pred CCCceEEEEEcccccCCc-----hh--HHHHHHHHHhHHHh-ccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcc
Confidence 456799999999995432 21 22223344455543 68999999999999999876666 45555665543
Q ss_pred -CCCeEEcCCCCccCCCCCC---CCCCCCCCCCccccccceeeecCCCCCCceEE--E----EEeCCEEEEEEeCCC---
Q 007211 359 -TVPYMIASGNHERDWPGTG---SFYGNKDSGGECGVLAETMFYVPAENRAKFWY--S----TDYGMFRFCVADTEH--- 425 (612)
Q Consensus 359 -~vP~~~v~GNHD~~~~~~~---~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Y--s----fd~G~v~fi~Ldt~~--- 425 (612)
+.|||.+.||||+..+-.. ..|.. ...||..|.. || + +..-++.++++|+-.
T Consensus 112 LQkpWy~vlGNHDyrGnV~AQls~~l~~----------~d~RW~c~rs-----f~~~ae~ve~f~v~~~~f~~d~~~~~~ 176 (336)
T KOG2679|consen 112 LQKPWYSVLGNHDYRGNVEAQLSPVLRK----------IDKRWICPRS-----FYVDAEIVEMFFVDTTPFMDDTFTLCT 176 (336)
T ss_pred cccchhhhccCccccCchhhhhhHHHHh----------hccceecccH-----Hhhcceeeeeeccccccchhhheeccc
Confidence 5799999999999743211 01111 1234443311 11 0 001122333333221
Q ss_pred ----CCCC-------CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeE
Q 007211 426 ----DWRE-------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDI 494 (612)
Q Consensus 426 ----~~~~-------~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vdl 494 (612)
+|.. ...|+.||+..|++ +.++|+||++|||+ .+.+.+ + .. ...+++|.|||+.++||+
T Consensus 177 ~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i-~S~~~H-G---~T--~eL~~~LlPiL~~n~Vdl 246 (336)
T KOG2679|consen 177 DDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPI-KSAGHH-G---PT--KELEKQLLPILEANGVDL 246 (336)
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccce-ehhhcc-C---Ch--HHHHHHHHHHHHhcCCcE
Confidence 1211 25788999999998 67899999999998 665432 3 21 223899999999999999
Q ss_pred EEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCc----ceeeeCceeEEEEEEecCC
Q 007211 495 AIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTW----SLYRDYDYGFVKLTAFDHS 570 (612)
Q Consensus 495 vlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~w----s~~~~~~~Gy~~l~v~n~~ 570 (612)
+++||+|+.|..- .++.++.+++.+||++...-...+|.| ..|....-||..+++ .+.
T Consensus 247 Y~nGHDHcLQhis-----------------~~e~~iqf~tSGagSkaw~g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~ 308 (336)
T KOG2679|consen 247 YINGHDHCLQHIS-----------------SPESGIQFVTSGAGSKAWRGTDHNPEVNPKELKFYYDGQGFMSVEI-SHS 308 (336)
T ss_pred EEecchhhhhhcc-----------------CCCCCeeEEeeCCcccccCCCccCCccChhheEEeeCCCceEEEEE-ecc
Confidence 9999999999873 223445555555565542222223333 345555669999998 788
Q ss_pred eEEEEEEECCCCcEEEEEEEEeC
Q 007211 571 NLLFEYKKSSDGKVYDSFRISRD 593 (612)
Q Consensus 571 ~l~~~~~~~~dG~v~D~f~i~k~ 593 (612)
.+++.|+ +..|+++.+....|.
T Consensus 309 e~~vvfy-D~~G~~Lhk~~t~kr 330 (336)
T KOG2679|consen 309 EARVVFY-DVSGKVLHKWSTSKR 330 (336)
T ss_pred eeEEEEE-eccCceEEEeecccc
Confidence 9999998 789999998776554
No 8
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.90 E-value=1.7e-22 Score=203.79 Aligned_cols=229 Identities=15% Similarity=0.209 Sum_probs=150.5
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh----cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
||++++|+|.+.......+ .......++++++. ..+||+|+++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 r~~~iSDlH~~~~~~~~~~---~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~ 74 (240)
T cd07402 1 LLAQISDLHLRADGEGALL---GVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVY 74 (240)
T ss_pred CEEEEeCCccCCCCcceec---CcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEE
Confidence 6999999998753210000 01112334444432 2489999999999964 4456677777777766 79999
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHHHH
Q 007211 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQYKFIEH 439 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~WL~~ 439 (612)
.++||||.... ...++. ... ......+|+|+.++++||+||+.... ....+|++||++
T Consensus 75 ~v~GNHD~~~~-~~~~~~-------------~~~----~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~ 136 (240)
T cd07402 75 LLPGNHDDRAA-MRAVFP-------------ELP----PAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEA 136 (240)
T ss_pred EeCCCCCCHHH-HHHhhc-------------ccc----ccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHH
Confidence 99999997411 001110 000 01234578999999999999987532 135789999999
Q ss_pred HHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeecccccceeccCC
Q 007211 440 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKE 518 (612)
Q Consensus 440 ~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~p~~~~~~~~~~ 518 (612)
.|++.. ..++|+++|+|+ +......... .... .++++.+++.++ +|+++|+||.|......
T Consensus 137 ~L~~~~---~~~~il~~H~pp-~~~~~~~~~~--~~~~-~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~----------- 198 (240)
T cd07402 137 ALAEAP---DKPTLVFLHHPP-FPVGIAWMDA--IGLR-NAEALAAVLARHPNVRAILCGHVHRPIDGS----------- 198 (240)
T ss_pred HHHhCC---CCCEEEEECCCC-ccCCchhhhh--hhCC-CHHHHHHHHhcCCCeeEEEECCcCchHHeE-----------
Confidence 999863 345889999998 5442211111 1111 277999999999 99999999999976542
Q ss_pred CccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecC
Q 007211 519 KNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDH 569 (612)
Q Consensus 519 ~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~ 569 (612)
.+|+.++++|+.|..+.. .++...+....+||..+.++++
T Consensus 199 -------~~g~~~~~~gs~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 238 (240)
T cd07402 199 -------WGGIPLLTAPSTCHQFAP----DLDDFALDALAPGYRALSLHED 238 (240)
T ss_pred -------ECCEEEEEcCcceeeecC----CCCcccccccCCCCcEEEEecC
Confidence 257888899987765421 2333344456789998887543
No 9
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.89 E-value=7.9e-22 Score=202.59 Aligned_cols=207 Identities=21% Similarity=0.250 Sum_probs=135.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCc--hhHHHHHHHhhhhhhcCCCe
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~s~vP~ 362 (612)
|||++++|+|....+.... .+...+...++++++++ .+||+|+++||+++.... ..+|+.+.+.++.+ .+|+
T Consensus 1 ~r~~~iSD~H~~~~~~~~~--~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~~~~~~~~~~~~l~~l--~~p~ 76 (267)
T cd07396 1 FRFGIIADIQYADEDDTRP--RYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNARAEEALDAVLAILDRL--KGPV 76 (267)
T ss_pred CeEEEEeccccccCCCccc--chHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCchHHHHHHHHHHHHHhc--CCCE
Confidence 6999999999664321100 11122334445555442 469999999999954432 14555555555544 5899
Q ss_pred EEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCC----------------
Q 007211 363 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD---------------- 426 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~---------------- 426 (612)
++++||||........ + . . +.....+..||+|++++++||+||+...
T Consensus 77 ~~v~GNHD~~~~~~~~-~-----------~----~-~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~ 139 (267)
T cd07396 77 HHVLGNHDLYNPSREY-L-----------L----L-YTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENAD 139 (267)
T ss_pred EEecCccccccccHhh-h-----------h----c-ccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHH
Confidence 9999999986321100 0 0 0 1111234568999999999999999531
Q ss_pred ------------------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHH
Q 007211 427 ------------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQ 488 (612)
Q Consensus 427 ------------------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~ 488 (612)
.....+|++||+++|+++.. +..++||++|+|+ +.... ..... ... ++.+.++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~-~~~~~--~~~~~--~~~-~~~~~~ll~ 212 (267)
T cd07396 140 DNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPL-HPEST--SPHGL--LWN-HEEVLSILR 212 (267)
T ss_pred HhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccC-CCCCC--Ccccc--ccC-HHHHHHHHH
Confidence 02347999999999998643 3345899999998 65432 11111 111 678999999
Q ss_pred hc-CCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCC
Q 007211 489 KY-KVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGA 539 (612)
Q Consensus 489 k~-~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~ 539 (612)
++ +|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 213 ~~~~V~~v~~GH~H~~~~~~------------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 213 AYGCVKACISGHDHEGGYAQ------------------RHGIHFLTLEGMVE 246 (267)
T ss_pred hCCCEEEEEcCCcCCCCccc------------------cCCeeEEEechhhc
Confidence 95 89999999999987432 25788888886543
No 10
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.87 E-value=2.7e-21 Score=213.20 Aligned_cols=310 Identities=17% Similarity=0.295 Sum_probs=148.2
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHH
Q 007211 237 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNT 316 (612)
Q Consensus 237 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~ 316 (612)
..+.+++.++||+|+|+|+||+... +....|+.++|+|+|... ...+||++++|.+... +..+.
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~---~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~------------~~~~~ 123 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVD---GGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYED------------GYFPA 123 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE-----TTEE---EEEE--TT------EEEEEE----CCC---------------HH
T ss_pred CCeEeecccCCCCCCceEEEEEEEe---cCCCCCCceEEEcCCCCC-CCceEEEEECCCCccc------------ChHHH
Confidence 4689999999999999999999984 123347899999996533 3459999999997532 12456
Q ss_pred HHHHHHhcCCccEEEEeCcccccCCc-----------------------hhH----HHHHH--HhhhhhhcCCCeEEcCC
Q 007211 317 TRQLIQDLKNIDIVFHIGDICYANGY-----------------------ISQ----WDQFT--AQIEPIASTVPYMIASG 367 (612)
Q Consensus 317 ~~~i~~~~~~pDfvl~~GDi~Y~~g~-----------------------~~~----wd~f~--~~i~~l~s~vP~~~v~G 367 (612)
++.+++. .+|||+||+||++|+++. ... |..+. ..++.+.+++|++.++.
T Consensus 124 ~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwD 202 (453)
T PF09423_consen 124 YRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWD 202 (453)
T ss_dssp HHHHTT--S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---
T ss_pred HHhhhcc-CCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEcc
Confidence 7777764 479999999999999852 111 22221 23566778999999999
Q ss_pred CCccCCCCCCCCCCCCCCCCccc-------cccceee-ecCC------CCCCceEEEEEeCC-EEEEEEeCCCCCC----
Q 007211 368 NHERDWPGTGSFYGNKDSGGECG-------VLAETMF-YVPA------ENRAKFWYSTDYGM-FRFCVADTEHDWR---- 428 (612)
Q Consensus 368 NHD~~~~~~~~~y~~~dsgge~g-------~~~~~~f-~~P~------~~~~~~~Ysfd~G~-v~fi~Ldt~~~~~---- 428 (612)
+||+..+..+. ...... ...+ ..++..+ .+|. ......|++|++|+ +.|++||++....
T Consensus 203 DHdi~nn~~~~-~~~~~~-~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~ 280 (453)
T PF09423_consen 203 DHDIGNNWWGD-GAENHQ-DTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPC 280 (453)
T ss_dssp STTTSTT-BTT-B-STT----HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CC
T ss_pred CceecccccCC-cccccc-ccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccc
Confidence 99995321100 000000 0000 0001111 1332 12356789999999 9999999985321
Q ss_pred -----------------CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCcc-------ccCCCCCCchhhHHHHH
Q 007211 429 -----------------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIF-------YAVDGSFAEPMGRESLQ 484 (612)
Q Consensus 429 -----------------~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~-------~~~~~~~~~~~~r~~l~ 484 (612)
.|.+|.+||++.|++ +.++|+|+..-.|+ ...... ...+..-.-+..|++|.
T Consensus 281 ~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~-~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll 356 (453)
T PF09423_consen 281 DGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPF-SPLNFPDAAEGLPFNMDSWDGYPAERQRLL 356 (453)
T ss_dssp CSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS---S---SS-SS-S--EETTSGGGSHHHHHHHH
T ss_pred cccccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCce-ecccccccccccccCCCchhhCHHHHHHHH
Confidence 268999999999998 56899999988876 222110 01111000112388999
Q ss_pred HHHHhcCCe--EEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCC---CCCCCCCCC------CCCCCcce
Q 007211 485 KLWQKYKVD--IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGG---GGAGLAEFT------PLQTTWSL 553 (612)
Q Consensus 485 ~l~~k~~Vd--lvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~---gG~~l~~~~------~~~~~ws~ 553 (612)
.+|.+.++. ++|+|.+|...-..--.+..-... ......+-+++++ +|..+.... ....++..
T Consensus 357 ~~l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~~------~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~ 430 (453)
T PF09423_consen 357 DFLRESGIRNVVFLSGDVHASAASRIPPDDADPPD------GPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLK 430 (453)
T ss_dssp HHHHHTT---EEEEE-SSSSEEEEEEESSTT---T------TS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEE
T ss_pred HHHHhhCCCCEEEEecCcchheeeecccccccccC------CCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCceE
Confidence 999988875 889999999765532111100000 0001123344443 111100000 01123444
Q ss_pred eee-CceeEEEEEEecCCeEEEEE
Q 007211 554 YRD-YDYGFVKLTAFDHSNLLFEY 576 (612)
Q Consensus 554 ~~~-~~~Gy~~l~v~n~~~l~~~~ 576 (612)
|.+ ..+||+.|++ +...++.+|
T Consensus 431 ~~~~~~~G~~~i~~-~~~~~~~~~ 453 (453)
T PF09423_consen 431 FADLRNFGYVEIDI-TPERVTAEW 453 (453)
T ss_dssp EEE-B-EEEEEEEE-ETTEEEEEE
T ss_pred EeECCCCcEEEEEE-ccceEEEEC
Confidence 543 6899999999 788888775
No 11
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.85 E-value=1.5e-19 Score=186.48 Aligned_cols=239 Identities=15% Similarity=0.182 Sum_probs=142.0
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH----hcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCC
Q 007211 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ----DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV 360 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~----~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~v 360 (612)
..+||+.++|+|...... .... .......++++++ ...+|||||++||++. ++...+++.+.+.++.+ .+
T Consensus 13 ~~~~i~~iSD~Hl~~~~~-~~~~--~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~-~~~~~~~~~~~~~l~~l--~~ 86 (275)
T PRK11148 13 ARVRILQITDTHLFADEH-ETLL--GVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ-DHSSEAYQHFAEGIAPL--RK 86 (275)
T ss_pred CCEEEEEEcCcccCCCCC-Ccee--ccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC-CCCHHHHHHHHHHHhhc--CC
Confidence 459999999999743211 1100 0111233444443 3347999999999995 45566777777777766 68
Q ss_pred CeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHH
Q 007211 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQYKF 436 (612)
Q Consensus 361 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~W 436 (612)
|+++++||||..... ..++ +.......++.+..++++||+|||.... ..+.+|++|
T Consensus 87 Pv~~v~GNHD~~~~~-~~~~-------------------~~~~~~~~~~~~~~~~~~~i~Lds~~~g~~~G~l~~~ql~w 146 (275)
T PRK11148 87 PCVWLPGNHDFQPAM-YSAL-------------------QDAGISPAKHVLIGEHWQILLLDSQVFGVPHGELSEYQLEW 146 (275)
T ss_pred cEEEeCCCCCChHHH-HHHH-------------------hhcCCCccceEEecCCEEEEEecCCCCCCcCCEeCHHHHHH
Confidence 999999999974210 0000 0000111123344456999999996432 235899999
Q ss_pred HHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeecccccceec
Q 007211 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICT 515 (612)
Q Consensus 437 L~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~p~~~~~~~ 515 (612)
|+++|++. .+.+-+|++.|+|+ .....|... ... . ..++|.++++++ +|+++|+||+|.....
T Consensus 147 L~~~L~~~--~~~~~vv~~hH~P~-~~~~~~~d~-~~l--~-n~~~l~~ll~~~~~v~~vl~GH~H~~~~~--------- 210 (275)
T PRK11148 147 LERKLADA--PERHTLVLLHHHPL-PAGCAWLDQ-HSL--R-NAHELAEVLAKFPNVKAILCGHIHQELDL--------- 210 (275)
T ss_pred HHHHHhhC--CCCCeEEEEcCCCC-CCCcchhhc-cCC--C-CHHHHHHHHhcCCCceEEEecccChHHhc---------
Confidence 99999986 23342444445565 322222111 111 1 167999999998 8999999999985432
Q ss_pred cCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEE
Q 007211 516 NKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 516 ~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 578 (612)
..+|+.++++++.+..... ..... .+.....||..+++.+++.+..+.++
T Consensus 211 ---------~~~gi~~~~~ps~~~q~~~---~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~ 260 (275)
T PRK11148 211 ---------DWNGRRLLATPSTCVQFKP---HCTNF-TLDTVAPGWRELELHADGSLETEVHR 260 (275)
T ss_pred ---------eECCEEEEEcCCCcCCcCC---CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEE
Confidence 1257777777766643211 11111 11233468888888555556655554
No 12
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.84 E-value=3.6e-20 Score=194.40 Aligned_cols=297 Identities=21% Similarity=0.306 Sum_probs=187.3
Q ss_pred eeeecCCCCCcEEEEEEeCCC--CC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007211 172 PRLAQGKTWNEMTVTWTSGYG--IN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 172 ~~La~~~~~~~m~V~W~t~~~--~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.-++.|+-...-.|-|+--.+ .+ +....+||++.+.....+..++.. .+ .+..+.+++.++
T Consensus 41 ~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~-----------a~---p~~dhtv~v~~~ 106 (522)
T COG3540 41 HGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVI-----------AS---PELDHTVHVDLR 106 (522)
T ss_pred cccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCcc-----------CC---cccCceEEEecc
Confidence 334556655555666764221 00 234566666655433222222111 11 124688999999
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC
Q 007211 247 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN 326 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 326 (612)
||+|++.|+||+... ..-|..++|||+|.++. .++|+.+||..+.. |+.+-..+.+.|.+ .+
T Consensus 107 gL~P~~~yfYRf~~~-----~~~spvGrtrTapa~~~--~i~~~~fa~ascQ~---------~~~gy~~aY~~ma~--~~ 168 (522)
T COG3540 107 GLSPDQDYFYRFKAG-----DERSPVGRTRTAPAPGR--AIRFVWFADASCQG---------WEIGYMTAYKTMAK--EE 168 (522)
T ss_pred CCCCCceEEEEEeeC-----CccccccccccCCCCCC--cchhhhhhhccccc---------cccchhHHHHHHHh--cC
Confidence 999999999999875 22378999999998765 47888888886643 44455667777776 57
Q ss_pred ccEEEEeCcccccCCchh-----------------------------HHHHHH--HhhhhhhcCCCeEEcCCCCccCCCC
Q 007211 327 IDIVFHIGDICYANGYIS-----------------------------QWDQFT--AQIEPIASTVPYMIASGNHERDWPG 375 (612)
Q Consensus 327 pDfvl~~GDi~Y~~g~~~-----------------------------~wd~f~--~~i~~l~s~vP~~~v~GNHD~~~~~ 375 (612)
|||+||.||.+|+.|-.. +|..++ +.++...+..|+++.+..||...+-
T Consensus 169 ~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~ 248 (522)
T COG3540 169 PDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNW 248 (522)
T ss_pred CCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccc
Confidence 999999999999976321 121111 1244556689999999999986321
Q ss_pred CCCCCCCCCC-CCccc------cccceee-ecCCCC-----CCceEEEEEeCC-EEEEEEeCCCCCC-------------
Q 007211 376 TGSFYGNKDS-GGECG------VLAETMF-YVPAEN-----RAKFWYSTDYGM-FRFCVADTEHDWR------------- 428 (612)
Q Consensus 376 ~~~~y~~~ds-gge~g------~~~~~~f-~~P~~~-----~~~~~Ysfd~G~-v~fi~Ldt~~~~~------------- 428 (612)
... -...|+ -.+.. .+++..+ .||-.. ....|.+|.||+ +.|.+||++.+..
T Consensus 249 ~~~-~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q 327 (522)
T COG3540 249 SNS-IDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQ 327 (522)
T ss_pred ccc-ccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhh
Confidence 100 000011 11100 0111111 355321 257899999999 6899999986431
Q ss_pred ---------CCHHHHHHHHHHHhhccCCCCCEEEEEEeccccc---CCC-----ccccCCCCCCchhhHHHHHHHHHhcC
Q 007211 429 ---------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGY---SSG-----IFYAVDGSFAEPMGRESLQKLWQKYK 491 (612)
Q Consensus 429 ---------~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~y---ss~-----~~~~~~~~~~~~~~r~~l~~l~~k~~ 491 (612)
.|..|.+||++.|.+ +++.|.|+..-.||.- ... .....++.-....+|+.|...+++.+
T Consensus 328 ~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~ 404 (522)
T COG3540 328 AVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRK 404 (522)
T ss_pred hhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcC
Confidence 268999999999998 7899999888877621 000 00011121223456999999999988
Q ss_pred Ce--EEEecCcccce
Q 007211 492 VD--IAIYGHVHNYE 504 (612)
Q Consensus 492 Vd--lvlsGH~H~Ye 504 (612)
+. ++|+|.+|.-.
T Consensus 405 ~~N~V~LtgDvH~~w 419 (522)
T COG3540 405 IRNTVVLTGDVHYSW 419 (522)
T ss_pred CCCcEEEechhHHHH
Confidence 76 89999999744
No 13
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.83 E-value=2.2e-19 Score=183.26 Aligned_cols=195 Identities=15% Similarity=0.183 Sum_probs=121.9
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCC--------chhHHHHHHHhhhhhhc--
Q 007211 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANG--------YISQWDQFTAQIEPIAS-- 358 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g--------~~~~wd~f~~~i~~l~s-- 358 (612)
|+.++|+|.+..... . .....+.+...+++ .+||+|+++||++.... ...+|+.|++.+.....
T Consensus 2 ~~~iSDlH~g~~~~~-~----~~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPP-N----RAQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCch-h----hhhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence 789999998753210 0 00000122233333 57999999999995431 24678888887765433
Q ss_pred CCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCC----------CC
Q 007211 359 TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD----------WR 428 (612)
Q Consensus 359 ~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~----------~~ 428 (612)
..|++.++||||....... +... ..+.............++++++.|+++||+|||... ..
T Consensus 76 ~~p~~~v~GNHD~~~~~~~------~~~~---~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPSL------DSEN---NYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred cceEEEeCCCCCcCCCCCc------cchh---hHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 6899999999998421100 0000 011111111111111222334459999999999742 12
Q ss_pred CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecc
Q 007211 429 EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCP 508 (612)
Q Consensus 429 ~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p 508 (612)
...+|++||++.|++. .+.+++||++|+|+ +..... . ... ...+.++|++++|+++|+||.|.+++..|
T Consensus 147 l~~~ql~wL~~~L~~~--~~~~~~IV~~HhP~-~~~~~~----~---~~~-~~~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 147 LDKKLLDRLEKELEKS--TNSNYTIWFGHYPT-STIISP----S---AKS-SSKFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred CCHHHHHHHHHHHHhc--ccCCeEEEEEcccc-hhccCC----C---cch-hHHHHHHHHhcCCcEEEeCCccCCCccee
Confidence 3589999999999975 34568999999998 442111 1 111 22499999999999999999999999666
Q ss_pred c
Q 007211 509 I 509 (612)
Q Consensus 509 ~ 509 (612)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 5
No 14
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.80 E-value=6.4e-19 Score=175.13 Aligned_cols=160 Identities=19% Similarity=0.252 Sum_probs=112.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhh-cCCCeE
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA-STVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~-s~vP~~ 363 (612)
|||++++|+|..... ........++++++.. .+||+|+++||+++......+|+.+.+.++.+. ..+|++
T Consensus 1 f~~~~~~D~q~~~~~-------~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 73 (214)
T cd07399 1 FTLAVLPDTQYYTES-------YPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPYS 73 (214)
T ss_pred CEEEEecCCCcCCcC-------CHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcEE
Confidence 689999999975421 0111123445555543 579999999999965544678999999888876 579999
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007211 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 443 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~ 443 (612)
+++||||.- +.+|+. ...+|++||++.|++
T Consensus 74 ~~~GNHD~~----------------------------------------------~~ld~~----~~~~ql~WL~~~L~~ 103 (214)
T cd07399 74 VLAGNHDLV----------------------------------------------LALEFG----PRDEVLQWANEVLKK 103 (214)
T ss_pred EECCCCcch----------------------------------------------hhCCCC----CCHHHHHHHHHHHHH
Confidence 999999931 112221 247999999999998
Q ss_pred ccCCCCCEEEEEEecccccCCCccccCCC-CCCchhhHHHHHHHHHhc-CCeEEEecCcccceeec
Q 007211 444 VDRQKQPWLIFLAHRVLGYSSGIFYAVDG-SFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTC 507 (612)
Q Consensus 444 ~~r~~~pwvIv~~H~P~~yss~~~~~~~~-~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~ 507 (612)
. +..++|+++|+|+ +....+..... ......+++.|++|++++ +|+++|+||+|.+.+..
T Consensus 104 ~---~~~~~iv~~H~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 104 H---PDRPAILTTHAYL-NCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred C---CCCCEEEEecccc-cCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 5 2345999999998 65433211100 000112356789999998 79999999999998875
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.70 E-value=2.7e-16 Score=164.00 Aligned_cols=180 Identities=14% Similarity=0.147 Sum_probs=116.1
Q ss_pred HHHHHHHHhcCCccEEEEeCcccccCCchh--------HHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCC
Q 007211 315 NTTRQLIQDLKNIDIVFHIGDICYANGYIS--------QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSG 386 (612)
Q Consensus 315 ~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~--------~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsg 386 (612)
++++.+.+...+|||||++||++....... .+..+++.++.....+|+++++||||....+.... ....
T Consensus 57 s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~---~~~~ 133 (296)
T cd00842 57 SALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPP---NNSP 133 (296)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCC---cccc
Confidence 455555554468999999999996654221 24556666777778999999999999863221110 0000
Q ss_pred Cccccccceeee--cCCC----CCCceEEEEE-eCCEEEEEEeCCCCC-----------CCCHHHHHHHHHHHhhccCCC
Q 007211 387 GECGVLAETMFY--VPAE----NRAKFWYSTD-YGMFRFCVADTEHDW-----------REGTEQYKFIEHCLASVDRQK 448 (612)
Q Consensus 387 ge~g~~~~~~f~--~P~~----~~~~~~Ysfd-~G~v~fi~Ldt~~~~-----------~~~~~Q~~WL~~~La~~~r~~ 448 (612)
..........|. +|.+ -....||+++ .++++||+|||.... ....+|++||+++|+++.+.+
T Consensus 134 ~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~~ 213 (296)
T cd00842 134 SWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQAG 213 (296)
T ss_pred cHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHCC
Confidence 000000011111 2211 1245688888 899999999997432 124789999999999875333
Q ss_pred CCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcC--CeEEEecCcccceee
Q 007211 449 QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYK--VDIAIYGHVHNYERT 506 (612)
Q Consensus 449 ~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~--VdlvlsGH~H~YeR~ 506 (612)
..++|++|+|+ +..... . . ...+++|.+++++|+ |.++|+||+|..+..
T Consensus 214 -~~v~I~~HiPp-~~~~~~----~-~--~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 214 -EKVWIIGHIPP-GVNSYD----T-L--ENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred -CeEEEEeccCC-CCcccc----c-c--hHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 44888999998 433211 0 0 122789999999997 788999999997755
No 16
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.65 E-value=3.3e-15 Score=146.76 Aligned_cols=166 Identities=14% Similarity=0.199 Sum_probs=102.0
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchh-HHHHHHHhhhhhhc-CCCeE
Q 007211 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYIS-QWDQFTAQIEPIAS-TVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~-~wd~f~~~i~~l~s-~vP~~ 363 (612)
.+||++++|+|....................+.++++. .+||+||++||+++...... .+..+.+.++++.. .+|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 48999999999876421100000111223445555554 68999999999997665432 23444444455433 79999
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007211 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 443 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~ 443 (612)
+++||||.. -....+|.+||+++|++
T Consensus 81 ~~~GNHD~~------------------------------------------------------g~l~~~ql~wL~~~l~~ 106 (199)
T cd07383 81 ATFGNHDGY------------------------------------------------------DWIRPSQIEWFKETSAA 106 (199)
T ss_pred EECccCCCC------------------------------------------------------CCCCHHHHHHHHHHHHH
Confidence 999999921 01235899999999998
Q ss_pred cc--CCCCCEEEEEEecccccCCCc-cc------cC--CCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeec
Q 007211 444 VD--RQKQPWLIFLAHRVLGYSSGI-FY------AV--DGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 507 (612)
Q Consensus 444 ~~--r~~~pwvIv~~H~P~~yss~~-~~------~~--~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~ 507 (612)
.. +....+.+++.|+|+ ..... |. +. +...........+..+.+..+|+++|+||+|.++...
T Consensus 107 ~~~~~~~~~~~l~f~H~P~-~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 107 LKKKYGKPIPSLAFFHIPL-PEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred HhhccCCCCcceEEEecCh-HHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 63 223456999999997 43321 11 00 1010011112334444466799999999999987654
No 17
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.65 E-value=4.7e-16 Score=144.63 Aligned_cols=197 Identities=19% Similarity=0.201 Sum_probs=99.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHH-HhhhhhhcCCCeEEc
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT-AQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~-~~i~~l~s~vP~~~v 365 (612)
+||+++||+|..... ... ....+..... ..++|+||++||+++.......+.... .........+|++++
T Consensus 1 ~ri~~isD~H~~~~~-------~~~-~~~~~~~~~~-~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (200)
T PF00149_consen 1 MRILVISDLHGGYDD-------DSD-AFRKLDEIAA-ENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFI 71 (200)
T ss_dssp EEEEEEEBBTTTHHH-------HCH-HHHHHHHHHH-HTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred CeEEEEcCCCCCCcc-------hhH-HHHHHHHHhc-cCCCCEEEeeccccccccccccchhhhccchhhhhcccccccc
Confidence 699999999976421 000 1122233332 378999999999998776554444322 223344568999999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCC--CCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007211 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPA--ENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 443 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~--~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~ 443 (612)
+||||+......... .............. ...... .........+..............+..|+...+..
T Consensus 72 ~GNHD~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (200)
T PF00149_consen 72 LGNHDYYSGNSFYGF-------YDYQFEDYYGNYNYYYSYFNNK-VIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLL 143 (200)
T ss_dssp E-TTSSHHHHHHHHH-------HHHHHSSEEECSSEEECTESSE-EEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHH
T ss_pred ccccccceecccccc-------ccccccccccccccccccCcce-eeecccccccccccccccccccccchhcccccccc
Confidence 999998531100000 00000000000000 000000 11222222222222211111122222333322222
Q ss_pred ccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccc
Q 007211 444 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 503 (612)
Q Consensus 444 ~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Y 503 (612)
..+...+++||++|+|+ ++........ ......++.+..++++++|+++|+||+|.|
T Consensus 144 ~~~~~~~~~iv~~H~p~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 144 LEAKNDDPVIVFTHHPP-YSSSSDSSSY--GNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHEEEESEEEEEESSSS-STTSSSTHHH--SSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred cccccccceeEEEecCC-CCcccccccc--chhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 22245678999999999 6553321100 001123789999999999999999999987
No 18
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.64 E-value=2.8e-15 Score=152.72 Aligned_cols=161 Identities=19% Similarity=0.206 Sum_probs=102.0
Q ss_pred CCccEEEEeCcccccCCc---hhHHH----HHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceee
Q 007211 325 KNIDIVFHIGDICYANGY---ISQWD----QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMF 397 (612)
Q Consensus 325 ~~pDfvl~~GDi~Y~~g~---~~~wd----~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f 397 (612)
.+||+||++||++.. |. ..+|. +|.+.+.++...+|++.++||||+.+..... . ..-..|...|
T Consensus 44 l~PD~vv~lGDL~d~-G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~-------~~~~rf~~~F 114 (257)
T cd08163 44 LKPDSTIFLGDLFDG-GRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-L-------PVRQRFEKYF 114 (257)
T ss_pred cCCCEEEEecccccC-CeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-H-------HHHHHHHHHh
Confidence 579999999999954 43 24454 3344444433358999999999985422100 0 0001122233
Q ss_pred ecCCCCCCceEEEEEeCCEEEEEEeCCCCC-----CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCC
Q 007211 398 YVPAENRAKFWYSTDYGMFRFCVADTEHDW-----REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDG 472 (612)
Q Consensus 398 ~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~ 472 (612)
. ...|+|++|+++||+||+.... ....+|.+||++.|+... ...| +|+++|+|+ |....- .++
T Consensus 115 g-------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~~-~~~p-~ILl~H~Pl-yr~~~~--~cg 182 (257)
T cd08163 115 G-------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMKV-KSKP-RILLTHVPL-YRPPNT--SCG 182 (257)
T ss_pred C-------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhccC-CCCc-EEEEecccc-ccCCCC--CCC
Confidence 1 2247899999999999996421 234679999999998742 2344 899999999 644221 111
Q ss_pred C---------------CCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007211 473 S---------------FAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 473 ~---------------~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
. +...+..+.-..||++.++.+||+||+|.|=..
T Consensus 183 ~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 183 PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 0 000111345567888889999999999998554
No 19
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.61 E-value=7.1e-15 Score=147.96 Aligned_cols=201 Identities=18% Similarity=0.253 Sum_probs=118.6
Q ss_pred EEEEeecCCCCC--CCCCcccccccchHHHHHHHHH---h-cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007211 289 VVIFGDMGKDEA--DGSNEYNDFQYASLNTTRQLIQ---D-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 289 f~v~GD~g~~~~--~~~~~~~~~~~~~~~~~~~i~~---~-~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~ 362 (612)
+.+++|+|.... .+.+. +.....+.++++.+ . ..+||+|+++||+++. +...+....++.++.+ ..|+
T Consensus 1 ~~~~sDlHl~~~~~~~~~~---~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~-~~~~~~~~~l~~l~~l--~~~v 74 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDV---FGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWA-MKLEEAKLDLAWIDAL--PGTK 74 (232)
T ss_pred CeEEEeeccCCCCCCCCcc---cCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccC-CChHHHHHHHHHHHhC--CCCe
Confidence 468899997742 11112 22222334444433 2 2489999999999943 3223333334444433 3588
Q ss_pred EEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCC-CceEEEEEeCCEEEEEEeCCC----CC----------
Q 007211 363 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR-AKFWYSTDYGMFRFCVADTEH----DW---------- 427 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~~Ysfd~G~v~fi~Ldt~~----~~---------- 427 (612)
++++||||+.......+ ... ++.... -..-.++.++++.|++++... .+
T Consensus 75 ~~V~GNHD~~~~~~~~~--------------~~~--l~~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~ 138 (232)
T cd07393 75 VLLKGNHDYWWGSASKL--------------RKA--LEESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVE 138 (232)
T ss_pred EEEeCCccccCCCHHHH--------------HHH--HHhcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccch
Confidence 99999999731110000 000 000000 000134567889999876311 11
Q ss_pred CC---CHHHHHHHHHHHhhccCCC-CCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccc
Q 007211 428 RE---GTEQYKFIEHCLASVDRQK-QPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNY 503 (612)
Q Consensus 428 ~~---~~~Q~~WL~~~La~~~r~~-~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Y 503 (612)
.. ..+|++||++.|+++.... ..++|++.|+|+ +.... ..+.+.+++++++|+++|+||+|.+
T Consensus 139 ~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~-~~~~~------------~~~~~~~~~~~~~v~~vl~GH~H~~ 205 (232)
T cd07393 139 EDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPP-ANENG------------DDSPISKLIEEYGVDICVYGHLHGV 205 (232)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC-cCCCC------------CHHHHHHHHHHcCCCEEEECCCCCC
Confidence 00 2568999999999864222 246999999998 54321 1447788999999999999999999
Q ss_pred eeecccccceeccCCCccccCCCCceEEEEeCCC
Q 007211 504 ERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGG 537 (612)
Q Consensus 504 eR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~g 537 (612)
++..|+... .+|+.|+++.++
T Consensus 206 ~~~~~~~~~-------------~~gi~~~~~~~~ 226 (232)
T cd07393 206 GRDRAINGE-------------RGGIRYQLVSAD 226 (232)
T ss_pred cccccccce-------------ECCEEEEEEcch
Confidence 998876432 256777776653
No 20
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.58 E-value=2.6e-13 Score=146.09 Aligned_cols=98 Identities=20% Similarity=0.182 Sum_probs=71.6
Q ss_pred CceEEEEE-eCCEEEEEEeCCCCC-----CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCC-CCch
Q 007211 405 AKFWYSTD-YGMFRFCVADTEHDW-----REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGS-FAEP 477 (612)
Q Consensus 405 ~~~~Ysfd-~G~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~-~~~~ 477 (612)
+..||+|+ .++++||+|||.... ....+|++||+++|++. +.+++||++|||+ ++.......... -...
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~a---~~k~VVVf~HHPp-~s~g~~~~Dp~~pg~~~ 365 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRAS---SDTLFVLFSHHTS-WSMVNELTDPVDPGEKR 365 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhcC---CCCCEEEEECCCC-ccccccccccccccccc
Confidence 56799999 899999999997431 23589999999999973 4457999999998 654321110000 0001
Q ss_pred hhHHHHHHHHHhc-CCeEEEecCcccceee
Q 007211 478 MGRESLQKLWQKY-KVDIAIYGHVHNYERT 506 (612)
Q Consensus 478 ~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~ 506 (612)
...++|.++|++| +|.++|+||.|.-..+
T Consensus 366 ~n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 366 HLGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred cCHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 1156899999998 8999999999987654
No 21
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.52 E-value=2.1e-14 Score=113.91 Aligned_cols=62 Identities=37% Similarity=0.777 Sum_probs=42.2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCcEEEEE
Q 007211 527 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSF 588 (612)
Q Consensus 527 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f 588 (612)
++|||||+|+||+.++++..++|+|+++|..+|||.+|++.|+++|++||+++.||+|+|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCcccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 48999999999999888888899999999999999999998999999999999999999998
No 22
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.51 E-value=4e-13 Score=129.73 Aligned_cols=168 Identities=17% Similarity=0.207 Sum_probs=100.8
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCC
Q 007211 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GN 368 (612)
|+++||+|.+.. .+.. ..++ ..++|+|+++||+++.. .......+ +.++.+ .+|+++++||
T Consensus 1 i~~~sD~H~~~~------------~~~~--~~~~-~~~~D~vv~~GDl~~~~-~~~~~~~~-~~l~~~--~~p~~~v~GN 61 (188)
T cd07392 1 ILAISDIHGDVE------------KLEA--IILK-AEEADAVIVAGDITNFG-GKEAAVEI-NLLLAI--GVPVLAVPGN 61 (188)
T ss_pred CEEEEecCCCHH------------HHHH--HHhh-ccCCCEEEECCCccCcC-CHHHHHHH-HHHHhc--CCCEEEEcCC
Confidence 578999996521 1111 2222 26899999999999543 33333333 344332 6899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCC------CCCCHHHHHHHHHHHh
Q 007211 369 HERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD------WREGTEQYKFIEHCLA 442 (612)
Q Consensus 369 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------~~~~~~Q~~WL~~~La 442 (612)
||.... ..... .....+ .+ ..+.++++.|+++++... .....+|++|+ +.|+
T Consensus 62 HD~~~~-----~~~~~---------~~~~~~-----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~ 119 (188)
T cd07392 62 CDTPEI-----LGLLT---------SAGLNL-----HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLN 119 (188)
T ss_pred CCCHHH-----HHhhh---------cCcEec-----CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhh
Confidence 997421 00000 000111 01 235678899999987432 12346889998 4444
Q ss_pred hccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007211 443 SVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 443 ~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
. .+.+.+|+++|+|+ +.... ..... ....+.+.+.+++++++++++|+||+|.-.
T Consensus 120 ~---~~~~~~ilv~H~pp-~~~~~--d~~~~-~~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 120 N---LLAKNLILVTHAPP-YGTAV--DRVSG-GFHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred c---cCCCCeEEEECCCC-cCCcc--cccCC-CCccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 3 23345899999998 55311 10000 011236789999999999999999999853
No 23
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.44 E-value=2.5e-12 Score=130.07 Aligned_cols=185 Identities=20% Similarity=0.238 Sum_probs=102.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
||++++|+|.... .+ .+ .+.++++++.. .++|+|+++||++... .+...+++.+..+ ..+|++.+
T Consensus 1 ki~~iSDlH~~~~----~~---~~--~~~l~~~~~~~~~~~~d~vv~~GDl~~~~---~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN----HF---DT--EEMLETLAQYLKKQKIDHLHIAGDISNDF---QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC----CC---CH--HHHHHHHHHHHHhcCCCEEEECCccccch---hhHHHHHHHHHHh-cCCcEEEE
Confidence 5899999997421 11 11 12233333321 5799999999999532 2223455554442 46899999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCC-------------------
Q 007211 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHD------------------- 426 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~------------------- 426 (612)
+||||+........+ ...+. + ....+.++.+..++++|++++--.+
T Consensus 68 ~GNHD~~~~~~~~~~-------------~~~~~-~-~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~ 132 (239)
T TIGR03729 68 AGNHDMLKDLTYEEI-------------ESNDS-P-LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSF 132 (239)
T ss_pred CCCCCCCCCCCHHHH-------------Hhccc-h-hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcE
Confidence 999997421100000 00000 0 0001112223335677777662111
Q ss_pred -------C--C---CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCC-CC---CchhhHHHHHHHHHhc
Q 007211 427 -------W--R---EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDG-SF---AEPMGRESLQKLWQKY 490 (612)
Q Consensus 427 -------~--~---~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~-~~---~~~~~r~~l~~l~~k~ 490 (612)
. . ...+|++||++.|++.. ..+ +|+++|+|+ .......+.+. .+ ....+...|.++++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~--~~~-~ivvtH~pP-~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~ 208 (239)
T TIGR03729 133 WFDRRIKRPMSDPERTAIVLKQLKKQLNQLD--NKQ-VIFVTHFVP-HRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY 208 (239)
T ss_pred EeecccCCCCChHHHHHHHHHHHHHHHHhcC--CCC-EEEEEcccc-hHHHhcCCCCCcchhhhhhccChHHHHHHHHHh
Confidence 1 0 12678999999998752 334 888889887 32110000000 00 0112357899999999
Q ss_pred CCeEEEecCcccce
Q 007211 491 KVDIAIYGHVHNYE 504 (612)
Q Consensus 491 ~VdlvlsGH~H~Ye 504 (612)
+|+++|+||.|.-.
T Consensus 209 ~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 209 EIKDVIFGHLHRRF 222 (239)
T ss_pred CCCEEEECCccCCC
Confidence 99999999999854
No 24
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.41 E-value=5.2e-12 Score=130.48 Aligned_cols=184 Identities=19% Similarity=0.270 Sum_probs=115.3
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
+||+.++|.|..... ......+.++++++ .+||+||++||+++. |...+++...+.++.+....|+++
T Consensus 1 ~~i~~isD~H~~~~~---------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGALG---------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCcccccc---------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 479999999988310 01223444444432 578999999999965 777777777777775555789999
Q ss_pred cCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEe-CCEEEEEEeCCCCC----CCCHHHHHHHHH
Q 007211 365 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY-GMFRFCVADTEHDW----REGTEQYKFIEH 439 (612)
Q Consensus 365 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~-G~v~fi~Ldt~~~~----~~~~~Q~~WL~~ 439 (612)
++||||....+...+ ...+.. ....+-.... +.++++.+|+.... ..+..|++||++
T Consensus 71 vpGNHD~~~~~~~~~--------------~~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~ 132 (301)
T COG1409 71 VPGNHDARVVNGEAF--------------SDQFFN----RYAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEE 132 (301)
T ss_pred eCCCCcCCchHHHHh--------------hhhhcc----cCcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHH
Confidence 999999864322110 000100 0011111122 67899999997542 346899999999
Q ss_pred HHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcC--CeEEEecCcccc
Q 007211 440 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYK--VDIAIYGHVHNY 503 (612)
Q Consensus 440 ~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~--VdlvlsGH~H~Y 503 (612)
.|++........+|+++|+|+ ........ .. .......+..++..++ |+++|+||.|.-
T Consensus 133 ~l~~~~~~~~~~~v~~~hh~~-~~~~~~~~--~~--~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 133 ALAAAPERAKDTVVVLHHHPL-PSPGTGVD--RV--ALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHhCccccCceEEEecCCCC-CCCCCccc--ee--eeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999853221124677777776 43322211 11 0111456777888887 999999999986
No 25
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.41 E-value=9.4e-12 Score=132.75 Aligned_cols=97 Identities=21% Similarity=0.223 Sum_probs=66.5
Q ss_pred CceEEEEE-eCCE--EEEEEeCCCCC-----------CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCc----
Q 007211 405 AKFWYSTD-YGMF--RFCVADTEHDW-----------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGI---- 466 (612)
Q Consensus 405 ~~~~Ysfd-~G~v--~fi~Ldt~~~~-----------~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~---- 466 (612)
+..||+|+ .|++ |||+||+.... ....+|++||+++|+.+. .+.+++|+++|+|+ .+...
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi-~t~gi~~md 368 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPI-AVSPIGSEM 368 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCc-ccCCccchh
Confidence 34599999 5845 99999987511 135899999999999874 25688899999988 54211
Q ss_pred -ccc-C-C--CCCCchhhHHHHHHHHHhc-CCeEEEecCcccc
Q 007211 467 -FYA-V-D--GSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNY 503 (612)
Q Consensus 467 -~~~-~-~--~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~Y 503 (612)
|.. . . ........-.+|..+|++| +|.++|+||.|.-
T Consensus 369 ~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 369 EWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 110 0 0 0011111124899999998 7999999999963
No 26
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.41 E-value=2.3e-12 Score=128.39 Aligned_cols=198 Identities=17% Similarity=0.170 Sum_probs=110.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
+||++++|+|..... ....++++++. ..+||+|+++||+++...... +.+.+.++.+...+|++.
T Consensus 2 ~~i~~~sDlH~~~~~-----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV-----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC-----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 799999999986421 01123333332 157999999999996544322 345556666666799999
Q ss_pred cCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007211 365 ASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASV 444 (612)
Q Consensus 365 v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~ 444 (612)
++||||+......... + ......+.+- .+.+..++.++..+.++--... ....+++.+.+++.
T Consensus 69 v~GNHD~~~~~~~~~~-------~--~l~~~~v~~L----~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~ 131 (223)
T cd07385 69 VLGNHDYYSGDEENWI-------E--ALESAGITVL----RNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL 131 (223)
T ss_pred ECCCcccccCchHHHH-------H--HHHHcCCEEe----ecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC
Confidence 9999998532110000 0 0000001110 1223445666544433321111 12345666777664
Q ss_pred cCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccce--eccC---CC
Q 007211 445 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNI--CTNK---EK 519 (612)
Q Consensus 445 ~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~--~~~~---~~ 519 (612)
.+..+.|++.|.|. + .+. +.+.++|++++||+|..|...|..... |... ..
T Consensus 132 --~~~~~~I~l~H~P~-~-----------------~~~----~~~~~~dl~l~GHtHggqi~~~~~~~~~~~~~~~~~~~ 187 (223)
T cd07385 132 --DEDDPNILLAHQPD-T-----------------AEE----AAAWGVDLQLSGHTHGGQIRLPGIGPLVLSKLARPYDY 187 (223)
T ss_pred --CCCCCEEEEecCCC-h-----------------hHH----hcccCccEEEeccCCCCEEeccccccccchhhcCcccc
Confidence 34456999999985 1 111 156799999999999999877765431 1111 11
Q ss_pred ccccCCCCceEEEEeCCCCC
Q 007211 520 NYYKGTLNGTIHVVAGGGGA 539 (612)
Q Consensus 520 ~~y~~~~~g~vyiv~G~gG~ 539 (612)
..|. ..+..+||..|.|..
T Consensus 188 G~~~-~~~~~~~Vs~G~G~~ 206 (223)
T cd07385 188 GLYR-KGGSQLYVSRGLGTW 206 (223)
T ss_pred eEEE-ECCEEEEEcCCccCC
Confidence 1121 234567777766543
No 27
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.41 E-value=2.7e-12 Score=119.11 Aligned_cols=125 Identities=18% Similarity=0.289 Sum_probs=83.9
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcC-CCeEEc
Q 007211 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST-VPYMIA 365 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~-vP~~~v 365 (612)
|+.++|.|.+....... ......++++++. ..++|+|+++||+++. +...+|+.+.+.++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~~-----~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPEL-----LALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhH-----HHHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEe
Confidence 57899999876421110 0111112223322 2579999999999965 4456777777777776544 699999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007211 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~ 445 (612)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999993
Q ss_pred CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007211 446 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 446 r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
|+++|+|+ +..... .... . ..++.+.+++++++++++|+||+|.....
T Consensus 81 -------iv~~Hhp~-~~~~~~-~~~~-~---~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 -------IVVLHHPL-VPPPGS-GRER-L---LDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred -------EEEecCCC-CCCCcc-cccc-C---CCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 88899998 444221 1111 1 12678999999999999999999996543
No 28
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.35 E-value=4.6e-11 Score=119.04 Aligned_cols=174 Identities=14% Similarity=0.177 Sum_probs=102.6
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007211 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.-|+++++|+|.+ ...++++++.. .++|+|+++||+++......+...+++.+..+ .+|++
T Consensus 4 ~~kIl~iSDiHgn---------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 4 VRYVLATSNPKGD---------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred eeEEEEEEecCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 4689999999954 23344444432 57999999999996542344444555555433 57999
Q ss_pred EcCCCCccCCCCC-CCCCCCCCCCCccccccceeeecCC-CCCCceEEEEEe-CCEEEEEEeCCCCC--CCCHHHH----
Q 007211 364 IASGNHERDWPGT-GSFYGNKDSGGECGVLAETMFYVPA-ENRAKFWYSTDY-GMFRFCVADTEHDW--REGTEQY---- 434 (612)
Q Consensus 364 ~v~GNHD~~~~~~-~~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~~Ysfd~-G~v~fi~Ldt~~~~--~~~~~Q~---- 434 (612)
+++||||...... ...|+. ....|. -..... ...+ |++.|++++-.... ....+|.
T Consensus 67 ~V~GNhD~~v~~~l~~~~~~-------------~~~~p~~~~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~ 131 (224)
T cd07388 67 YVPGPQDAPLWEYLREAYNA-------------ELVHPEIRNVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYP 131 (224)
T ss_pred EEcCCCChHHHHHHHHHhcc-------------cccCccceecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhh
Confidence 9999999630000 000000 000010 000111 1344 66999999865432 2234442
Q ss_pred HHHHH-HHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcc
Q 007211 435 KFIEH-CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVH 501 (612)
Q Consensus 435 ~WL~~-~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H 501 (612)
.||.+ .|+...+...+..|+++|+|+ |..+. ...+...+..++++++..++++||.|
T Consensus 132 ~~~~~~~l~~~~~~~~~~~VLv~H~PP-~g~g~---------~h~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 132 AWVAEYRLKALWELKDYRKVFLFHTPP-YHKGL---------NEQGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hhHHHHHHHHHHhCCCCCeEEEECCCC-CCCCC---------CccCHHHHHHHHHHhCCCEEEEcCCc
Confidence 56433 222221122345899999999 76621 12346799999999999999999999
No 29
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.30 E-value=1.3e-11 Score=117.52 Aligned_cols=149 Identities=17% Similarity=0.178 Sum_probs=84.8
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCC
Q 007211 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GN 368 (612)
|++++|+|.+.... ...+.+.. ...++|+|+++||+++... ..++.. .........|+++++||
T Consensus 1 ~~~iSDlH~~~~~~-----------~~~~~~~~-~~~~~d~li~~GDi~~~~~-~~~~~~---~~~~~~~~~~v~~v~GN 64 (166)
T cd07404 1 IQYLSDLHLEFEDN-----------LADLLNFP-IAPDADILVLAGDIGYLTD-APRFAP---LLLALKGFEPVIYVPGN 64 (166)
T ss_pred CceEccccccCccc-----------cccccccC-CCCCCCEEEECCCCCCCcc-hHHHHH---HHHhhcCCccEEEeCCC
Confidence 57899999764210 00111111 1267999999999996432 222222 22233457899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCC
Q 007211 369 HERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQK 448 (612)
Q Consensus 369 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~ 448 (612)
||+.. +|. ....||.+... +.++.+|+.++++
T Consensus 65 HD~~~----------------------~~~-----G~~~w~~~~~~---------------~~~~~~~~~~d~~------ 96 (166)
T cd07404 65 HEFYV----------------------RII-----GTTLWSDISLF---------------GEAAARMRMNDFR------ 96 (166)
T ss_pred cceEE----------------------EEE-----eeecccccCcc---------------chHHHHhCCCCCC------
Confidence 99730 010 00123333211 1244555555443
Q ss_pred CCEEEEEEecccccCCCc-cccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007211 449 QPWLIFLAHRVLGYSSGI-FYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 449 ~pwvIv~~H~P~~yss~~-~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
+.+|+++|+|+ +.... +....+.. ....++.+..++++++|+++++||+|...
T Consensus 97 -~~~vv~~HhpP-~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 97 -GKTVVVTHHAP-SPLSLAPQYGDSLV-NAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred -CCEEEEeCCCC-CccccCccccCCCc-chhhhhccHhHHhhcCCCEEEECCccccc
Confidence 23899999998 55432 11111111 11225668888889999999999999864
No 30
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.30 E-value=3.6e-11 Score=119.46 Aligned_cols=197 Identities=12% Similarity=0.099 Sum_probs=107.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCC-chhHHHHHHHhhhhhh-cCCCeE
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIA-STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g-~~~~wd~f~~~i~~l~-s~vP~~ 363 (612)
||++++|+|.+.......-........++++++++. ..++|+|+++||+++... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 689999999985421110000011123455555543 257999999999996543 2334556666666654 479999
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeec--CCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHH
Q 007211 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYV--PAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCL 441 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~--P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~L 441 (612)
+++||||....... +... ......... ...........++.+++.|+.++..... ....+.+++++.+
T Consensus 81 ~~~GNHD~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~ 150 (223)
T cd00840 81 IIAGNHDSPSRLGA--LSPL-------LALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRP 150 (223)
T ss_pred EecCCCCCcccccc--ccch-------HhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHh
Confidence 99999998642210 0000 000000000 0001112223345556888888754321 1123444555555
Q ss_pred hhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007211 442 ASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 442 a~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
... .+....|++.|.|+ ...... .. .. .......+...++|++++||.|..+.
T Consensus 151 ~~~--~~~~~~Il~~H~~~-~~~~~~---~~---~~--~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 151 RPL--DPDDFNILLLHGGV-AGAGPS---DS---ER--APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred hcc--CCCCcEEEEEeeee-ecCCCC---cc---cc--cccCcHhhcCcCCCEEECCCcccCee
Confidence 543 34556999999997 332111 00 00 11233445678899999999999764
No 31
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.28 E-value=7.2e-11 Score=121.67 Aligned_cols=170 Identities=16% Similarity=0.215 Sum_probs=95.2
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007211 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~ 362 (612)
.++||++++|+|.+... + ...++++++. ..+||+|+++||+++.. ....++.+.+.++.+.+..|+
T Consensus 48 ~~~rI~~lSDlH~~~~~---------~--~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv 115 (271)
T PRK11340 48 APFKILFLADLHYSRFV---------P--LSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPT 115 (271)
T ss_pred CCcEEEEEcccCCCCcC---------C--HHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCE
Confidence 35999999999976321 1 1123333322 26899999999999622 223345666777777667899
Q ss_pred EEcCCCCccCCCCCC-CCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCC--EEEEEEeCCCCCCCCHHHHHHHHH
Q 007211 363 MIASGNHERDWPGTG-SFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGM--FRFCVADTEHDWREGTEQYKFIEH 439 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~-~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~--v~fi~Ldt~~~~~~~~~Q~~WL~~ 439 (612)
++++||||+...... ..+.. .-.+.|+ .+ ..+....+..++ +.+++++.. +. +... ..+
T Consensus 116 ~~V~GNHD~~~~~~~~~~~~~--~l~~~gi------~l----L~n~~~~i~~~~~~i~i~G~~d~--~~-~~~~---~~~ 177 (271)
T PRK11340 116 FACFGNHDRPVGTEKNHLIGE--TLKSAGI------TV----LFNQATVIATPNRQFELVGTGDL--WA-GQCK---PPP 177 (271)
T ss_pred EEecCCCCcccCccchHHHHH--HHHhcCc------EE----eeCCeEEEeeCCcEEEEEEecch--hc-cCCC---hhH
Confidence 999999997421100 00000 0000010 01 012234455443 566677532 11 1111 111
Q ss_pred HHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeeccccc
Q 007211 440 CLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQ 511 (612)
Q Consensus 440 ~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~ 511 (612)
.++ ++. ..|++.|.|- + . +.+.+.++||+|+||+|.-|-..|..+
T Consensus 178 ~~~----~~~-~~IlL~H~P~-~-----------------~----~~~~~~~~dL~lsGHTHGGQi~lP~~~ 222 (271)
T PRK11340 178 ASE----ANL-PRLVLAHNPD-S-----------------K----EVMRDEPWDLMLCGHTHGGQLRVPLVG 222 (271)
T ss_pred hcC----CCC-CeEEEEcCCC-h-----------------h----HhhccCCCCEEEeccccCCeEEccccC
Confidence 222 233 4899999995 1 0 122457899999999999998777643
No 32
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.13 E-value=1.1e-09 Score=102.51 Aligned_cols=153 Identities=17% Similarity=0.298 Sum_probs=90.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.||+++||+|.+. ..++++++...++|+|+++||++.. .++++.++.+ |++++.
T Consensus 1 Mki~~~sD~H~~~---------------~~~~~~~~~~~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~ 54 (156)
T PF12850_consen 1 MKIAVISDLHGNL---------------DALEAVLEYINEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVR 54 (156)
T ss_dssp EEEEEEE--TTTH---------------HHHHHHHHHHTTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE-
T ss_pred CEEEEEeCCCCCh---------------hHHHHHHHHhcCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEe
Confidence 4899999999752 2244555554679999999999852 4555665554 999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccC
Q 007211 367 GNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDR 446 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r 446 (612)
||||... + ..... ... +. .....
T Consensus 55 GNHD~~~------~-------------~~~~~------~~~-----------------------------~~---~~~~~ 77 (156)
T PF12850_consen 55 GNHDNWA------F-------------PNEND------EEY-----------------------------LL---DALRL 77 (156)
T ss_dssp -CCHSTH------H-------------HSEEC------TCS-----------------------------SH---SEEEE
T ss_pred CCccccc------c-------------hhhhh------ccc-----------------------------cc---cceee
Confidence 9999631 0 00000 000 00 00000
Q ss_pred CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCC
Q 007211 447 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTL 526 (612)
Q Consensus 447 ~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~ 526 (612)
.-..+.|++.|.+. +... .. .+.+..++...+++++|+||.|..+... .
T Consensus 78 ~~~~~~i~~~H~~~-~~~~-----------~~-~~~~~~~~~~~~~~~~~~GH~H~~~~~~------------------~ 126 (156)
T PF12850_consen 78 TIDGFKILLSHGHP-YDVQ-----------WD-PAELREILSRENVDLVLHGHTHRPQVFK------------------I 126 (156)
T ss_dssp EETTEEEEEESSTS-SSST-----------TT-HHHHHHHHHHTTSSEEEESSSSSEEEEE------------------E
T ss_pred eecCCeEEEECCCC-cccc-----------cC-hhhhhhhhcccCCCEEEcCCcccceEEE------------------E
Confidence 11245788888766 3321 11 4567788889999999999999977653 2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEE
Q 007211 527 NGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTA 566 (612)
Q Consensus 527 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v 566 (612)
+++.++..|+-+... . ...-+|+.+++
T Consensus 127 ~~~~~~~~Gs~~~~~--~-----------~~~~~~~i~~~ 153 (156)
T PF12850_consen 127 GGIHVINPGSIGGPR--H-----------GDQSGYAILDI 153 (156)
T ss_dssp TTEEEEEE-GSSS-S--S-----------SSSEEEEEEEE
T ss_pred CCEEEEECCcCCCCC--C-----------CCCCEEEEEEE
Confidence 467778888765431 1 11458888887
No 33
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.10 E-value=7.8e-09 Score=105.72 Aligned_cols=88 Identities=13% Similarity=0.256 Sum_probs=58.3
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccc--------cchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhh
Q 007211 284 NSLQRVVIFGDMGKDEADGSNEYNDFQ--------YASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~--------~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 355 (612)
+..||++.++|||.+...+..-.+.++ ....+.++++++ .++||||+++||+++.......-.-+++.++|
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~-sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP 129 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLA-SEKPDLVVFTGDNIFGHSTQDAATSLMKAVAP 129 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHh-ccCCCEEEEeCCcccccccHhHHHHHHHHhhh
Confidence 456999999999997652211111111 112345666665 38999999999999774332222245566776
Q ss_pred h-hcCCCeEEcCCCCccC
Q 007211 356 I-ASTVPYMIASGNHERD 372 (612)
Q Consensus 356 l-~s~vP~~~v~GNHD~~ 372 (612)
. ..+|||.++.||||-.
T Consensus 130 ~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 130 AIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred HhhcCCCeEEEecccccc
Confidence 4 4589999999999965
No 34
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.05 E-value=2.3e-09 Score=95.73 Aligned_cols=96 Identities=29% Similarity=0.427 Sum_probs=69.2
Q ss_pred cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCC
Q 007211 324 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAEN 403 (612)
Q Consensus 324 ~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~ 403 (612)
..++|+|+++||+++.... ..+..+..........+|+++++||||
T Consensus 24 ~~~~~~vi~~GD~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~GNHD--------------------------------- 69 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGPD-PEEVLAAALALLLLLGIPVYVVPGNHD--------------------------------- 69 (131)
T ss_pred ccCCCEEEECCcccCCCCC-chHHHHHHHHHhhcCCCCEEEeCCCce---------------------------------
Confidence 3789999999999975543 333333323333455899999999999
Q ss_pred CCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHH
Q 007211 404 RAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESL 483 (612)
Q Consensus 404 ~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l 483 (612)
|++.|.|+ +....... .. ... .+..+
T Consensus 70 -------------------------------------------------i~~~H~~~-~~~~~~~~-~~--~~~-~~~~~ 95 (131)
T cd00838 70 -------------------------------------------------ILLTHGPP-YDPLDELS-PD--EDP-GSEAL 95 (131)
T ss_pred -------------------------------------------------EEEeccCC-CCCchhhc-cc--chh-hHHHH
Confidence 88999998 54432111 11 011 26788
Q ss_pred HHHHHhcCCeEEEecCcccceeec
Q 007211 484 QKLWQKYKVDIAIYGHVHNYERTC 507 (612)
Q Consensus 484 ~~l~~k~~VdlvlsGH~H~YeR~~ 507 (612)
..++.+.+++++|+||.|.+++..
T Consensus 96 ~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 96 LELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred HHHHHHhCCCEEEeCCeecccccc
Confidence 999999999999999999999875
No 35
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=99.01 E-value=3e-09 Score=109.76 Aligned_cols=78 Identities=12% Similarity=0.095 Sum_probs=57.0
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007211 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
...++++.++|+|.... +....+.+.++.+ ..+|+|+.+||++.. .....+....+.++++.+..+++
T Consensus 42 ~~~~~iv~lSDlH~~~~---------~~~~~~~~~~i~~--~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~ 109 (284)
T COG1408 42 LQGLKIVQLSDLHSLPF---------REEKLALLIAIAN--ELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVF 109 (284)
T ss_pred cCCeEEEEeehhhhchh---------hHHHHHHHHHHHh--cCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEE
Confidence 34689999999998742 1122344455544 467999999999964 22344567777788888899999
Q ss_pred EcCCCCccCC
Q 007211 364 IASGNHERDW 373 (612)
Q Consensus 364 ~v~GNHD~~~ 373 (612)
++.||||+..
T Consensus 110 av~GNHd~~~ 119 (284)
T COG1408 110 AVLGNHDYGV 119 (284)
T ss_pred EEeccccccc
Confidence 9999999864
No 36
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.96 E-value=2.2e-08 Score=94.03 Aligned_cols=59 Identities=15% Similarity=0.418 Sum_probs=42.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCC
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~G 367 (612)
|++++||+|... ..++++++...++|.|+++||+++.... .. +....|++.+.|
T Consensus 1 ~i~~isD~H~~~---------------~~~~~~~~~~~~~d~ii~~GD~~~~~~~-~~----------~~~~~~~~~V~G 54 (155)
T cd00841 1 KIGVISDTHGSL---------------ELLEKALELFGDVDLIIHAGDVLYPGPL-NE----------LELKAPVIAVRG 54 (155)
T ss_pred CEEEEecCCCCH---------------HHHHHHHHHhcCCCEEEECCcccccccc-ch----------hhcCCcEEEEeC
Confidence 589999999542 3455666655559999999999954322 11 234679999999
Q ss_pred CCccC
Q 007211 368 NHERD 372 (612)
Q Consensus 368 NHD~~ 372 (612)
|||..
T Consensus 55 NhD~~ 59 (155)
T cd00841 55 NCDGE 59 (155)
T ss_pred CCCCc
Confidence 99973
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.84 E-value=2.8e-08 Score=91.40 Aligned_cols=117 Identities=21% Similarity=0.365 Sum_probs=75.7
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCC
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~G 367 (612)
||+++||+|.... .+ ...++|+|+++||++.. +...+++.+.+.++.+. ..+++.++|
T Consensus 1 ~i~~isD~H~~~~-------------------~~-~~~~~D~vi~~GD~~~~-~~~~~~~~~~~~l~~~~-~~~~~~v~G 58 (135)
T cd07379 1 RFVCISDTHSRHR-------------------TI-SIPDGDVLIHAGDLTER-GTLEELQKFLDWLKSLP-HPHKIVIAG 58 (135)
T ss_pred CEEEEeCCCCCCC-------------------cC-cCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 5899999996421 11 22679999999999953 44444555555555442 123578999
Q ss_pred CCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCC
Q 007211 368 NHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQ 447 (612)
Q Consensus 368 NHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~ 447 (612)
|||... . . .
T Consensus 59 NHD~~~-------------------------------~--------------------------------------~--~ 67 (135)
T cd07379 59 NHDLTL-------------------------------D--------------------------------------P--E 67 (135)
T ss_pred CCCCcC-------------------------------C--------------------------------------C--C
Confidence 999620 0 1 1
Q ss_pred CCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007211 448 KQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 448 ~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
.+.|++.|.|+ +..... .... ...+.+.+.+++++++++++|+||+|...
T Consensus 68 --~~~ilv~H~~p-~~~~~~-~~~~---~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 68 --DTDILVTHGPP-YGHLDL-VSSG---QRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred --CCEEEEECCCC-CcCccc-cccC---cccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 23688899998 665321 1100 11224578888899999999999999864
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.81 E-value=1.2e-07 Score=94.96 Aligned_cols=64 Identities=22% Similarity=0.377 Sum_probs=42.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
+||+++||.|.... . ... +.++. .+||+|+++||++... .++.+.+..+ ..|+++++
T Consensus 1 ~rIa~isDiHg~~~----------~---~~~-~~l~~-~~pD~Vl~~GDi~~~~------~~~~~~l~~l--~~p~~~V~ 57 (238)
T cd07397 1 LRIAIVGDVHGQWD----------L---EDI-KALHL-LQPDLVLFVGDFGNES------VQLVRAISSL--PLPKAVIL 57 (238)
T ss_pred CEEEEEecCCCCch----------H---HHH-HHHhc-cCCCEEEECCCCCcCh------HHHHHHHHhC--CCCeEEEc
Confidence 58999999995421 1 111 23333 5799999999998421 1333333333 47999999
Q ss_pred CCCccCC
Q 007211 367 GNHERDW 373 (612)
Q Consensus 367 GNHD~~~ 373 (612)
||||+.+
T Consensus 58 GNHD~~~ 64 (238)
T cd07397 58 GNHDAWY 64 (238)
T ss_pred CCCcccc
Confidence 9999865
No 39
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.80 E-value=1.4e-08 Score=98.54 Aligned_cols=48 Identities=15% Similarity=0.265 Sum_probs=34.5
Q ss_pred CCccEEEEeCcccccCCc--hhHHHHHHHhhhhhh---cCCCeEEcCCCCccC
Q 007211 325 KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA---STVPYMIASGNHERD 372 (612)
Q Consensus 325 ~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~---s~vP~~~v~GNHD~~ 372 (612)
.+||+|+++||+++.... ..+|.+.++.+.++. ..+|++.++||||.+
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 579999999999966543 233544444444443 368999999999985
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.79 E-value=8.5e-07 Score=85.68 Aligned_cols=65 Identities=17% Similarity=0.314 Sum_probs=41.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCC
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~G 367 (612)
+++++||+|...... .....+.+++++ .++|.|+|+||++. . ...+.++.+ ..|++.+.|
T Consensus 1 ~i~viSDtHl~~~~~---------~~~~~~~~~~~~-~~~d~iih~GDi~~----~----~~~~~l~~~--~~~~~~V~G 60 (178)
T cd07394 1 LVLVIGDLHIPHRAS---------DLPAKFKKLLVP-GKIQHVLCTGNLCS----K----ETYDYLKTI--APDVHIVRG 60 (178)
T ss_pred CEEEEEecCCCCCch---------hhHHHHHHHhcc-CCCCEEEECCCCCC----H----HHHHHHHhh--CCceEEEEC
Confidence 489999999654211 112345555554 57999999999984 1 222333332 247999999
Q ss_pred CCccC
Q 007211 368 NHERD 372 (612)
Q Consensus 368 NHD~~ 372 (612)
|||..
T Consensus 61 N~D~~ 65 (178)
T cd07394 61 DFDEN 65 (178)
T ss_pred CCCcc
Confidence 99963
No 41
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.75 E-value=2.7e-07 Score=87.19 Aligned_cols=63 Identities=17% Similarity=0.318 Sum_probs=42.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.|++++||+|.... ..+.+.++++...++|.|+|+||++. ....+.++.+ ..|++.+.
T Consensus 1 m~i~viSD~H~~~~------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~V~ 58 (158)
T TIGR00040 1 MKILVISDTHGPLR------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIAVR 58 (158)
T ss_pred CEEEEEecccCCcc------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEEEc
Confidence 47999999996421 12334455554348999999999981 1233333332 45899999
Q ss_pred CCCcc
Q 007211 367 GNHER 371 (612)
Q Consensus 367 GNHD~ 371 (612)
||||.
T Consensus 59 GN~D~ 63 (158)
T TIGR00040 59 GNNDG 63 (158)
T ss_pred cCCCc
Confidence 99996
No 42
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.74 E-value=3.9e-08 Score=99.58 Aligned_cols=182 Identities=18% Similarity=0.241 Sum_probs=95.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH-hcCCccEEEEeCcccccC-Cc---hhHHHHHHHhhhhhhcC-C
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-DLKNIDIVFHIGDICYAN-GY---ISQWDQFTAQIEPIAST-V 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~pDfvl~~GDi~Y~~-g~---~~~wd~f~~~i~~l~s~-v 360 (612)
.|+++++|+|.+... +...+.+.+.++ ...++|+|+++||+++.- |. ....+...+.++.+... +
T Consensus 1 M~i~~iSDlHl~~~~---------~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~ 71 (241)
T PRK05340 1 MPTLFISDLHLSPER---------PAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGV 71 (241)
T ss_pred CcEEEEeecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCC
Confidence 378999999986431 111122222222 225799999999999531 11 12223455556666544 8
Q ss_pred CeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHH
Q 007211 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHC 440 (612)
Q Consensus 361 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~ 440 (612)
|++.+.||||..... .+. .++|+ .. +|. ...+++++.++++.-... +......|+++++.
T Consensus 72 ~v~~v~GNHD~~~~~--~~~------~~~g~---~~--l~~------~~~~~~~g~~i~l~HGd~-~~~~d~~y~~~r~~ 131 (241)
T PRK05340 72 PCYFMHGNRDFLLGK--RFA------KAAGM---TL--LPD------PSVIDLYGQRVLLLHGDT-LCTDDKAYQRFRRK 131 (241)
T ss_pred eEEEEeCCCchhhhH--HHH------HhCCC---EE--eCC------cEEEEECCEEEEEECCcc-cccCCHHHHHHHHH
Confidence 999999999974210 010 01111 01 111 134666777766664322 11233556666555
Q ss_pred HhhccCCCCCEEEEEEecccccCCCcc------------cc-CCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007211 441 LASVDRQKQPWLIFLAHRVLGYSSGIF------------YA-VDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 441 La~~~r~~~pwvIv~~H~P~~yss~~~------------~~-~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
+.. ||...+.|.++ +....+ .. ....+... ..+.+.+++++++++++++||+|.-..
T Consensus 132 ~r~------~~~~~~~~~~p-~~~~~~ia~~~~~~s~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 132 VRN------PWLQWLFLALP-LSIRLRIAAKMRAKSKAANQSKSLEIMDV-NPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HhC------HHHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCCCcccccCC-CHHHHHHHHHHhCCCEEEECcccCcce
Confidence 543 12333333333 211000 00 00011111 145788999999999999999998654
No 43
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.70 E-value=1.5e-06 Score=84.97 Aligned_cols=176 Identities=19% Similarity=0.293 Sum_probs=100.6
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccC-CchhHHHHHHHh--hhhhh-cCCC
Q 007211 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQ--IEPIA-STVP 361 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~--i~~l~-s~vP 361 (612)
.+|++++.|.|.... .+..+..++++ .++|+++.+||++|.. +... .-.+. ++.+. ..+|
T Consensus 3 ~mkil~vtDlHg~~~------------~~~k~~~~~~~-~~~D~lviaGDlt~~~~~~~~---~~~~~~~~e~l~~~~~~ 66 (226)
T COG2129 3 KMKILAVTDLHGSED------------SLKKLLNAAAD-IRADLLVIAGDLTYFHFGPKE---VAEELNKLEALKELGIP 66 (226)
T ss_pred cceEEEEeccccchH------------HHHHHHHHHhh-ccCCEEEEecceehhhcCchH---HHHhhhHHHHHHhcCCe
Confidence 479999999986531 12233333333 4799999999999432 1111 11111 34444 4799
Q ss_pred eEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCC--CCC----CCC-HHHH
Q 007211 362 YMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE--HDW----REG-TEQY 434 (612)
Q Consensus 362 ~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~----~~~-~~Q~ 434 (612)
+++++||-|-..-. ... .. .++. + .+ -..+.|++.|+.+--. ..| ... .+-+
T Consensus 67 v~avpGNcD~~~v~--~~l---~~---~~~~------v-----~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~ 125 (226)
T COG2129 67 VLAVPGNCDPPEVI--DVL---KN---AGVN------V-----HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIY 125 (226)
T ss_pred EEEEcCCCChHHHH--HHH---Hh---cccc------c-----cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHH
Confidence 99999998853100 000 00 0000 0 00 3466777777774211 111 112 2334
Q ss_pred HHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007211 435 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 435 ~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
.-|++-+.+.+ .+-.|+..|.|+ |..... ...+ ....|...+.+++++.++-+.++||.|-+.-
T Consensus 126 s~l~~~v~~~~---~~~~Il~~HaPP-~gt~~d-~~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 126 SKLKSLVKKAD---NPVNILLTHAPP-YGTLLD-TPSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred HHHHHHHhccc---CcceEEEecCCC-CCcccc-CCCC--ccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 45555555542 121399999999 766432 1111 1345678999999999999999999998543
No 44
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.69 E-value=1.8e-07 Score=88.44 Aligned_cols=56 Identities=18% Similarity=0.415 Sum_probs=38.9
Q ss_pred HHHHHHHhcCCccEEEEeCcccccCC--chhHHHHHHHhhhhhhc---CCCeEEcCCCCccC
Q 007211 316 TTRQLIQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIEPIAS---TVPYMIASGNHERD 372 (612)
Q Consensus 316 ~~~~i~~~~~~pDfvl~~GDi~Y~~g--~~~~wd~f~~~i~~l~s---~vP~~~v~GNHD~~ 372 (612)
.++++++. .+||+|+++||++.... ...+|..+...+..+.+ .+|++.++||||..
T Consensus 29 ~~~~~i~~-~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 29 SFQTSLWL-LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHHHHh-cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34455554 58999999999996532 23456665555554433 58999999999974
No 45
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.68 E-value=1.1e-07 Score=92.70 Aligned_cols=177 Identities=18% Similarity=0.264 Sum_probs=89.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHH-------------------
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD------------------- 347 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd------------------- 347 (612)
=|+++++|.+... ..++.+..++.+ .++|+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g~~------------e~l~~l~~~~~e-~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~ 72 (255)
T PF14582_consen 6 RKILAISNFRGDF------------ELLERLVEVIPE-KGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEEC 72 (255)
T ss_dssp -EEEEEE--TT-H------------HHHHHHHHHHHH-HT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHH
T ss_pred hhheeecCcchHH------------HHHHHHHhhccc-cCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhh
Confidence 4789999986331 224445555555 48999999999997766666676
Q ss_pred -------HHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCC--CCCCceEEEEEeCCEEE
Q 007211 348 -------QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPA--ENRAKFWYSTDYGMFRF 418 (612)
Q Consensus 348 -------~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~--~~~~~~~Ysfd~G~v~f 418 (612)
.|++.+..+ .+|.+++|||||-.. . .|+. .++....-.|. +-... +.+--|.+-|
T Consensus 73 ~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~--~-~~lr---------~a~~~e~v~p~~~~vH~s--f~~~~g~y~v 136 (255)
T PF14582_consen 73 YDSEALDKFFRILGEL--GVPVFVVPGNMDAPE--R-FFLR---------EAYNAEIVTPHIHNVHES--FFFWKGEYLV 136 (255)
T ss_dssp HHHHHHHHHHHHHHCC---SEEEEE--TTS-SH--H-HHHH---------HHHHCCCC-TTEEE-CTC--EEEETTTEEE
T ss_pred hhHHHHHHHHHHHHhc--CCcEEEecCCCCchH--H-HHHH---------HHhccceeccceeeeeee--ecccCCcEEE
Confidence 666666554 899999999999621 0 0000 00110000110 00011 2233345777
Q ss_pred EEEeCCCC---CCC------CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh
Q 007211 419 CVADTEHD---WRE------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK 489 (612)
Q Consensus 419 i~Ldt~~~---~~~------~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k 489 (612)
+++-.+.. ... -....+|..+.|..+ +..-+|++.|.|+-+.. +. ...|.+.+..++++
T Consensus 137 ~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~k------g~---~h~GS~~V~dlIk~ 204 (255)
T PF14582_consen 137 AGMGGEITDDQREEEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHK------GL---IHVGSAAVRDLIKT 204 (255)
T ss_dssp EEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCT------CT---BTTSBHHHHHHHHH
T ss_pred EecCccccCCCccccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCC------Cc---ccccHHHHHHHHHh
Confidence 76654311 000 022345566666665 23348888999971111 10 12235689999999
Q ss_pred cCCeEEEecCcccce
Q 007211 490 YKVDIAIYGHVHNYE 504 (612)
Q Consensus 490 ~~VdlvlsGH~H~Ye 504 (612)
|+.+++|+||.|.-.
T Consensus 205 ~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 205 YNPDIVLCGHIHESH 219 (255)
T ss_dssp H--SEEEE-SSS-EE
T ss_pred cCCcEEEecccccch
Confidence 999999999999744
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.60 E-value=2.2e-07 Score=84.93 Aligned_cols=49 Identities=24% Similarity=0.306 Sum_probs=33.1
Q ss_pred EEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007211 452 LIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 452 vIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
.|++.|+|+ +.... ..+ . ...+.+.+.+++.+++++++|+||.|.....
T Consensus 58 ~Ilv~H~pp-~~~~~--~~~--~-~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 58 DILLTHAPP-AGIGD--GED--F-AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred CEEEECCCC-CcCcC--ccc--c-cccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 577888887 53321 111 1 1123678889999999999999999986554
No 47
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.56 E-value=6.3e-07 Score=98.36 Aligned_cols=175 Identities=19% Similarity=0.213 Sum_probs=100.7
Q ss_pred HHHHHHHHhcCCccEEEEeCcccccCCc----h---hHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCC
Q 007211 315 NTTRQLIQDLKNIDIVFHIGDICYANGY----I---SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGG 387 (612)
Q Consensus 315 ~~~~~i~~~~~~pDfvl~~GDi~Y~~g~----~---~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgg 387 (612)
++++.|.+...++|+|+++||++--+.- . .......+.+......+|+++++||||.-..+.-.. ... ..
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~--~~~-~~ 275 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAP--GSV-PK 275 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCC--CCC-cc
Confidence 3555555555569999999999944311 1 111233444556667999999999999864322110 000 00
Q ss_pred cccc--cc------ceeeecCCCC----CCceEEE-EEeCCEEEEEEeCCCCC----------CCCHHHHHHHHHHHhhc
Q 007211 388 ECGV--LA------ETMFYVPAEN----RAKFWYS-TDYGMFRFCVADTEHDW----------REGTEQYKFIEHCLASV 444 (612)
Q Consensus 388 e~g~--~~------~~~f~~P~~~----~~~~~Ys-fd~G~v~fi~Ldt~~~~----------~~~~~Q~~WL~~~La~~ 444 (612)
..+. .| +..| +|.+. ..+.+|. .-+++.++|+||+..-+ ....+|++|+..+|.++
T Consensus 276 ~~~~~wly~~~~~~W~~w-lp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~a 354 (577)
T KOG3770|consen 276 RHSQLWLYKHLAGAWSTW-LPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEA 354 (577)
T ss_pred hhhhhHHHHHHHhhhhcc-CCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHH
Confidence 0000 00 1111 34321 2344554 44588999999997421 12468899999999987
Q ss_pred cCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcC--CeEEEecCcccce
Q 007211 445 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYK--VDIAIYGHVHNYE 504 (612)
Q Consensus 445 ~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~--VdlvlsGH~H~Ye 504 (612)
.. +..-|=+++|.|++ . +...+.- ...+-.++.++. +...|.||.|.=+
T Consensus 355 e~-~GekVhil~HIPpG-~--------~~c~~~w-s~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 355 ES-AGEKVHILGHIPPG-D--------GVCLEGW-SINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred Hh-cCCEEEEEEeeCCC-C--------cchhhhh-hHHHHHHHHHHHHhhhhhccccCccee
Confidence 53 33337788999982 1 1111111 335555565553 4567999999855
No 48
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.55 E-value=9.5e-07 Score=82.73 Aligned_cols=147 Identities=19% Similarity=0.258 Sum_probs=78.5
Q ss_pred CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCC
Q 007211 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR 404 (612)
Q Consensus 325 ~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~ 404 (612)
..=|.|+..|||+.+...... ..=++.+..+ ... -+.+.|||||-|+..... + -.+|..
T Consensus 42 ~~eDiVllpGDiSWaM~l~ea-~~Dl~~i~~L-PG~-K~m~rGNHDYWw~s~skl-~---------------n~lp~~-- 100 (230)
T COG1768 42 SPEDIVLLPGDISWAMRLEEA-EEDLRFIGDL-PGT-KYMIRGNHDYWWSSISKL-N---------------NALPPI-- 100 (230)
T ss_pred ChhhEEEecccchhheechhh-hhhhhhhhcC-CCc-EEEEecCCccccchHHHH-H---------------hhcCch--
Confidence 345899999999987543221 1112222221 112 457999999977522100 0 001100
Q ss_pred CceEE---EEEeCCEEEEEE---eCC-CCCCCCHHHH--------HHHHHHHhhccCCCCCEEEEEEecccccCCCcccc
Q 007211 405 AKFWY---STDYGMFRFCVA---DTE-HDWREGTEQY--------KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYA 469 (612)
Q Consensus 405 ~~~~Y---sfd~G~v~fi~L---dt~-~~~~~~~~Q~--------~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~ 469 (612)
.+| .|.++++-+++. ++. .++.+-++|- .-|+..+.++-++...-.||+.|.|+ ++...
T Consensus 101 --l~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP-~s~~~--- 174 (230)
T COG1768 101 --LFYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPP-FSDDG--- 174 (230)
T ss_pred --HhhhccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCC-CCCCC---
Confidence 011 255666555443 221 1222223332 22333222222334445899999998 66531
Q ss_pred CCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeec
Q 007211 470 VDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 507 (612)
Q Consensus 470 ~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~ 507 (612)
. ...+.+++++++|+.++.||.|.-.|-.
T Consensus 175 ---t------~~~~sevlee~rv~~~lyGHlHgv~~p~ 203 (230)
T COG1768 175 ---T------PGPFSEVLEEGRVSKCLYGHLHGVPRPN 203 (230)
T ss_pred ---C------CcchHHHHhhcceeeEEeeeccCCCCCC
Confidence 1 2256678889999999999999987753
No 49
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.55 E-value=2.1e-07 Score=89.30 Aligned_cols=57 Identities=19% Similarity=0.460 Sum_probs=39.8
Q ss_pred HHHHHHHHhcCCccEEEEeCcccccCCc--hhHHHHHHHhhhhhhc-------CCCeEEcCCCCccC
Q 007211 315 NTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAS-------TVPYMIASGNHERD 372 (612)
Q Consensus 315 ~~~~~i~~~~~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~s-------~vP~~~v~GNHD~~ 372 (612)
+++.++++. .+||+|+++||+++.... ..+|.+..+.+..+.. .+|++.++||||+.
T Consensus 35 ~~~~~~i~~-~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 35 RAFKTALQR-LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHHh-cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 345555554 689999999999965432 2456655555544432 68999999999985
No 50
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.54 E-value=1.1e-06 Score=88.48 Aligned_cols=74 Identities=15% Similarity=0.193 Sum_probs=45.8
Q ss_pred EEEeecCCCCCCCCCcccccccchH-HHHHHHHHhcCCccEEEEeCccccc----CCchhHHHHHHHhhhhhhc-CCCeE
Q 007211 290 VIFGDMGKDEADGSNEYNDFQYASL-NTTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIAS-TVPYM 363 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~pDfvl~~GDi~Y~----~g~~~~wd~f~~~i~~l~s-~vP~~ 363 (612)
++++|+|.+... +... ..++.+.+...+||+|+++||+++. +......+.+.+.++.+.. .+|++
T Consensus 2 ~~iSDlHl~~~~---------~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPER---------PDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 689999987421 1111 2233333322479999999999952 1112222344555666554 58999
Q ss_pred EcCCCCccC
Q 007211 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
+++||||+.
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999974
No 51
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=98.49 E-value=2e-07 Score=93.28 Aligned_cols=138 Identities=20% Similarity=0.284 Sum_probs=80.7
Q ss_pred CCccEEEEeCcccccCCc---------------------hhHHHH-HH-----HhhhhhhcCCCeEEcCCCCccCCCCCC
Q 007211 325 KNIDIVFHIGDICYANGY---------------------ISQWDQ-FT-----AQIEPIASTVPYMIASGNHERDWPGTG 377 (612)
Q Consensus 325 ~~pDfvl~~GDi~Y~~g~---------------------~~~wd~-f~-----~~i~~l~s~vP~~~v~GNHD~~~~~~~ 377 (612)
.+||++||+||.+|++.. ...+.. +. ..++.+.+++|++.++.+||+..+...
T Consensus 28 ~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~ 107 (228)
T cd07389 28 EDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGG 107 (228)
T ss_pred cCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCCHHHHHHhhcCCEEEecccccccccccc
Confidence 689999999999999852 111211 11 124556778999999999999643221
Q ss_pred CCCCCCCC-CC-----ccc-cccceeeecCCC-----CCCceEEEEEeCCE-EEEEEeCCCCCCCCHHHHHHHHHHHhhc
Q 007211 378 SFYGNKDS-GG-----ECG-VLAETMFYVPAE-----NRAKFWYSTDYGMF-RFCVADTEHDWREGTEQYKFIEHCLASV 444 (612)
Q Consensus 378 ~~y~~~ds-gg-----e~g-~~~~~~f~~P~~-----~~~~~~Ysfd~G~v-~fi~Ldt~~~~~~~~~Q~~WL~~~La~~ 444 (612)
. ...... .. +.+ ..|....+.+.. .....|+++.+|.. .|++||++...
T Consensus 108 ~-~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~~~lD~R~~R----------------- 169 (228)
T cd07389 108 D-GAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDLILLDTRTYR----------------- 169 (228)
T ss_pred c-cccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceEEEEeccccc-----------------
Confidence 1 000000 00 000 011111122211 23568999999996 99999998653
Q ss_pred cCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCC--eEEEecCcccceee
Q 007211 445 DRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKV--DIAIYGHVHNYERT 506 (612)
Q Consensus 445 ~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~V--dlvlsGH~H~YeR~ 506 (612)
+.|.+ + +..|++|..++.+.++ -++|+|++|.-+-.
T Consensus 170 --------------------d~W~~----~--~~er~~l~~~~~~~~~~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 170 --------------------DSWDG----Y--PAERERLLDLLAKRKIKNVVFLSGDVHLAEAS 207 (228)
T ss_pred --------------------ccccc----c--HHHHHHHHHHHHHhCCCCeEEEecHHHHHHHh
Confidence 12211 1 1127788877665543 38899999986543
No 52
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.48 E-value=4e-06 Score=90.74 Aligned_cols=84 Identities=18% Similarity=0.209 Sum_probs=51.3
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCc-hhHHHHHHHhhhh-------
Q 007211 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEP------- 355 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~------- 355 (612)
.+||++++|+|.+...... ........+++++++. ..++|+||++||+...... .....++++.++.
T Consensus 3 ~mKIlh~SD~HlG~~~~~~---~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~Ps~~~~~~~~~~lr~~~~g~~p 79 (405)
T TIGR00583 3 TIRILVSTDNHVGYGENDP---VRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENKPSRKSLYQVLRSLRLYCLGDKP 79 (405)
T ss_pred ceEEEEEcCCCCCCccCCc---hhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHhhccCCc
Confidence 4899999999987431110 0111234455555543 2679999999999965432 1222233333332
Q ss_pred -----h----------------------hcCCCeEEcCCCCccC
Q 007211 356 -----I----------------------ASTVPYMIASGNHERD 372 (612)
Q Consensus 356 -----l----------------------~s~vP~~~v~GNHD~~ 372 (612)
+ ...+|++++.||||..
T Consensus 80 ~~~~~Lsd~~~~~~~~~~~~~ny~d~~~~~~iPVf~I~GNHD~p 123 (405)
T TIGR00583 80 CELEFLSDASVVFNQSAFGNVNYEDPNINVAIPVFSIHGNHDDP 123 (405)
T ss_pred cchhhccchhhhcccccccccccccccccCCCCEEEEcCCCCCc
Confidence 0 1369999999999974
No 53
>PRK09453 phosphodiesterase; Provisional
Probab=98.47 E-value=1.1e-05 Score=78.00 Aligned_cols=71 Identities=13% Similarity=0.224 Sum_probs=43.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCch-----hHHHHHHHhhhhhhcCCC
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI-----SQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~-----~~wd~f~~~i~~l~s~vP 361 (612)
.|++++||+|.+. ..++.+.+.+++ .++|.|+|+||++...... ...++..+.++.+ ..|
T Consensus 1 mri~viSD~Hg~~------------~~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 65 (182)
T PRK09453 1 MKLMFASDTHGSL------------PATEKALELFAQ-SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADK 65 (182)
T ss_pred CeEEEEEeccCCH------------HHHHHHHHHHHh-cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCc
Confidence 3899999999431 112333333332 6799999999999532210 0123334444332 358
Q ss_pred eEEcCCCCccC
Q 007211 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
++.+.||||..
T Consensus 66 v~~V~GNhD~~ 76 (182)
T PRK09453 66 IIAVRGNCDSE 76 (182)
T ss_pred eEEEccCCcch
Confidence 99999999963
No 54
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.43 E-value=3.5e-06 Score=85.65 Aligned_cols=80 Identities=19% Similarity=0.150 Sum_probs=41.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCcc-EEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pD-fvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
++|+.++|+|..-.+ . -+.+....+..++++. .++| +++..||++..... ..+......++.+..--.-+
T Consensus 1 l~i~~~sD~hg~~~~-~-----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~-~~~~~~~~~~~~l~~~g~d~ 73 (252)
T cd00845 1 LTILHTNDLHGHFEP-A-----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPP-STATKGEANIELMNALGYDA 73 (252)
T ss_pred CEEEEecccccCccc-c-----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccc-hhccCCcHHHHHHHhcCCCE
Confidence 489999999943210 0 0111233344444432 3577 88999999954432 11211111222222222445
Q ss_pred EcCCCCccCC
Q 007211 364 IASGNHERDW 373 (612)
Q Consensus 364 ~v~GNHD~~~ 373 (612)
.++||||+++
T Consensus 74 ~~~GNHe~d~ 83 (252)
T cd00845 74 VTIGNHEFDY 83 (252)
T ss_pred Eeeccccccc
Confidence 6789999874
No 55
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.40 E-value=1.6e-06 Score=84.21 Aligned_cols=49 Identities=16% Similarity=0.302 Sum_probs=32.3
Q ss_pred cCCccEEEEeCcccccCCc--hhHHHHHHHhhhhhh--------------------cCCCeEEcCCCCccCC
Q 007211 324 LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA--------------------STVPYMIASGNHERDW 373 (612)
Q Consensus 324 ~~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~--------------------s~vP~~~v~GNHD~~~ 373 (612)
..+||.|+++||+... +. .++|.+....+..+. ..+|++.++||||+..
T Consensus 42 ~l~Pd~V~fLGDLfd~-~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 42 WLKPDAVVVLGDLFSS-QWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred hcCCCEEEEeccccCC-CcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 3689999999999943 33 344443222222211 1489999999999964
No 56
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.37 E-value=1.5e-05 Score=82.33 Aligned_cols=198 Identities=14% Similarity=0.128 Sum_probs=90.1
Q ss_pred eEEEEEeecCCCCCCC-CCcccccccchHHHHHHHHHhc--CCccEEEE-eCcccccCCchhHHH---------HHHHhh
Q 007211 287 QRVVIFGDMGKDEADG-SNEYNDFQYASLNTTRQLIQDL--KNIDIVFH-IGDICYANGYISQWD---------QFTAQI 353 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~-~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~-~GDi~Y~~g~~~~wd---------~f~~~i 353 (612)
++|+.++|+|..-... ...-..-..+....+..++++. .+++.+++ +||+..... ...+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~-~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSP-LADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccH-HHHHhhhcccCCCChHHHHH
Confidence 4789999999542110 0000000012233444444432 35777766 999995432 12221 122333
Q ss_pred hhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecC-CCCCCceEEEEEeC-CEEEEEE--eCCCC-
Q 007211 354 EPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVP-AENRAKFWYSTDYG-MFRFCVA--DTEHD- 426 (612)
Q Consensus 354 ~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P-~~~~~~~~Ysfd~G-~v~fi~L--dt~~~- 426 (612)
..+ ... +.++||||+++... .+.... .+.+.++ .+..... .......|.-++.+ ++++-++ -+...
T Consensus 80 n~~--g~d-~~~lGNHe~d~g~~--~l~~~~--~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 80 NAL--GYD-AGTLGNHEFNYGLD--YLDKVI--KQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred Hhc--CCC-EEeecccCcccCHH--HHHHHH--HhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 322 333 55789999875211 000000 0000111 0111000 00112345667888 8655444 33211
Q ss_pred -C-----------CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCe
Q 007211 427 -W-----------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVD 493 (612)
Q Consensus 427 -~-----------~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~Vd 493 (612)
+ ....+..++..+.|++ .+...+|+++|-....... ..... +.....|.++ .+||
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~-----~~~~~----~~~~~~la~~~~~vD 220 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLE-----ESLTG----ENAAYELAEEVPGID 220 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcc-----cccCC----ccHHHHHHhcCCCCc
Confidence 1 0111233444444543 3567899999987621110 00000 2233344444 5899
Q ss_pred EEEecCcccce
Q 007211 494 IAIYGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|.||.|...
T Consensus 221 ~IlgGHsH~~~ 231 (277)
T cd07410 221 AILTGHQHRRF 231 (277)
T ss_pred EEEeCCCcccc
Confidence 99999999754
No 57
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.27 E-value=1.8e-05 Score=81.07 Aligned_cols=191 Identities=17% Similarity=0.224 Sum_probs=100.0
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCccEEEEeCcccccCCch-----------hHHHHHHHhhhhh
Q 007211 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGYI-----------SQWDQFTAQIEPI 356 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~pDfvl~~GDi~Y~~g~~-----------~~wd~f~~~i~~l 356 (612)
|+|.||.|..- . .....+..+.+. ..++|++|++||+.-..... ..+..|.+.++..
T Consensus 1 i~v~Gd~HG~~----------~-~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~ 69 (262)
T cd00844 1 IAVEGCCHGEL----------D-KIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGE 69 (262)
T ss_pred CEEEecCCccH----------H-HHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCC
Confidence 57899998531 0 111223333222 24699999999996322111 1233444444432
Q ss_pred h-cCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCC---CCCC---
Q 007211 357 A-STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH---DWRE--- 429 (612)
Q Consensus 357 ~-s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~---~~~~--- 429 (612)
. ..+|.+++.||||-. .++.....|++.. .+.+.+-. ...+++++++|..|.-.. ++..
T Consensus 70 ~~~p~~t~fi~GNHE~~-----~~l~~l~~gg~v~---~Ni~~Lg~------~~v~~~~GlrIaGLsG~~~~~~~~~~~~ 135 (262)
T cd00844 70 KKAPILTIFIGGNHEAS-----NYLWELPYGGWVA---PNIYYLGY------AGVVNFGGLRIAGLSGIYKSHDYRKGHF 135 (262)
T ss_pred ccCCeeEEEECCCCCCH-----HHHHhhcCCCeec---CcEEEecC------CCEEEECCeEEEEecccccccccccccc
Confidence 2 367779999999952 1111111122210 11121211 124567899999887521 1111
Q ss_pred -----CHHHHHHHH-------HHHhhccCCCCCEEEEEEecccccCCCccccCC-------CCC-----CchhhHHHHHH
Q 007211 430 -----GTEQYKFIE-------HCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVD-------GSF-----AEPMGRESLQK 485 (612)
Q Consensus 430 -----~~~Q~~WL~-------~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~-------~~~-----~~~~~r~~l~~ 485 (612)
...+.+.+. ..|... +.+--|+++|.|+ +.-..+ +.. ..+ ....|...+..
T Consensus 136 ~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP-~gI~~~-~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ 210 (262)
T cd00844 136 ERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDIFLSHDWP-RGIYKH-GDKKQLLRKKPFFRQDIESGTLGSPAAEE 210 (262)
T ss_pred cCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcEEEeCCCC-cchhhc-cchHHhhhcCccchhcccccCCCCHHHHH
Confidence 122232211 122221 1223699999998 554321 110 000 01335678889
Q ss_pred HHHhcCCeEEEecCccc-ceeeccc
Q 007211 486 LWQKYKVDIAIYGHVHN-YERTCPI 509 (612)
Q Consensus 486 l~~k~~VdlvlsGH~H~-YeR~~p~ 509 (612)
|+++.+...+|+||.|. |++..|-
T Consensus 211 ll~~lkPryhf~gH~H~~f~~~~~~ 235 (262)
T cd00844 211 LLKHLKPRYWFSAHLHVKFAALVPH 235 (262)
T ss_pred HHHHhCCCEEEEecCCcccceecCC
Confidence 99999999999999999 7777553
No 58
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.24 E-value=3.9e-06 Score=83.15 Aligned_cols=74 Identities=16% Similarity=0.129 Sum_probs=44.5
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccC-----CchhHHHHH-HHhhhhhhcCCC
Q 007211 290 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYAN-----GYISQWDQF-TAQIEPIASTVP 361 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~-----g~~~~wd~f-~~~i~~l~s~vP 361 (612)
++++|+|.+.... ........+.+.. .++|.++++||++..- ......+.. ...++......+
T Consensus 1 ~~iSDlHlg~~~~---------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 71 (217)
T cd07398 1 LFISDLHLGDGGP---------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTR 71 (217)
T ss_pred CEeeeecCCCCCC---------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCe
Confidence 4789999876421 1112233333322 4899999999999531 111112222 333444456899
Q ss_pred eEEcCCCCccC
Q 007211 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
++.+.||||..
T Consensus 72 v~~v~GNHD~~ 82 (217)
T cd07398 72 VYYVPGNHDFL 82 (217)
T ss_pred EEEECCCchHH
Confidence 99999999975
No 59
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.23 E-value=1.5e-05 Score=81.61 Aligned_cols=186 Identities=18% Similarity=0.164 Sum_probs=87.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCcc-EEEEeCcccccCCchhHH---HHHHHhhhhhhcCC
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pD-fvl~~GDi~Y~~g~~~~w---d~f~~~i~~l~s~v 360 (612)
++++.+.|+|.-... .... .+.+..+..++++. .+++ +++.+||++.... ...+ +...+.++.+ ..
T Consensus 1 ~~il~~nd~~~~~~~---~~~~--~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~-~~~~~~g~~~~~~l~~l--~~ 72 (257)
T cd07406 1 FTILHFNDVYEIAPL---DGGP--VGGAARFATLRKQLRKENPNTLVLFSGDVLSPSL-LSTATKGKQMVPVLNAL--GV 72 (257)
T ss_pred CeEEEEccceeeccc---CCCC--cCCHHHHHHHHHHHHhcCCCEEEEECCCccCCcc-chhhcCCccHHHHHHhc--CC
Confidence 478889999832211 0011 12233444444432 3567 9999999995432 2111 1222222222 22
Q ss_pred CeEEcCCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecCCCC---CCceEEEEEeCCEEE--EEEeCCCCC------
Q 007211 361 PYMIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVPAEN---RAKFWYSTDYGMFRF--CVADTEHDW------ 427 (612)
Q Consensus 361 P~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P~~~---~~~~~Ysfd~G~v~f--i~Ldt~~~~------ 427 (612)
-+.++||||+++... .+...- .+.+.++ .+...-..+. .-+.|.-++.+++++ +.+.+....
T Consensus 73 -d~~~~GNHefd~g~~--~l~~~~--~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~ 147 (257)
T cd07406 73 -DLACFGNHEFDFGED--QLQKRL--GESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTID 147 (257)
T ss_pred -cEEeecccccccCHH--HHHHHH--hhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCC
Confidence 256899999964211 110000 0001111 0111000000 124567788888654 555443211
Q ss_pred CC---CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007211 428 RE---GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 428 ~~---~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
.. -.+-.+.+++.+++..+.+..-+|++.|-+. . . . + .+.+.+ .+||++|.||.|..+
T Consensus 148 ~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~-~-~------------d--~-~la~~~--~~iD~IlgGH~H~~~ 208 (257)
T cd07406 148 PEYVRYRDYVETARELVDELREQGADLIIALTHMRL-P-N------------D--K-RLAREV--PEIDLILGGHDHEYI 208 (257)
T ss_pred CCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc-h-h------------h--H-HHHHhC--CCCceEEecccceeE
Confidence 00 0122233444333322246677899999775 1 0 0 1 222222 489999999999866
No 60
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.22 E-value=8.4e-05 Score=75.76 Aligned_cols=194 Identities=15% Similarity=0.153 Sum_probs=99.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccch---HHHHHHHHHhcCCccEEEEeCcccccC-CchhHHHHHHHhhhhhhcCCCeE
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYAS---LNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
|++++||.=-. ++. ...+.++.++ .++||++..||++-.. |.. ....+.+..+ .+-++
T Consensus 1 ~ilfigdi~g~------------~G~~~~~~~l~~lk~~-~~~D~vi~NgEn~~gg~gl~---~~~~~~L~~~--G~D~i 62 (255)
T cd07382 1 KILFIGDIVGK------------PGRKAVKEHLPKLKKE-YKIDFVIANGENAAGGKGIT---PKIAKELLSA--GVDVI 62 (255)
T ss_pred CEEEEEeCCCH------------HHHHHHHHHHHHHHHH-CCCCEEEECCccccCCCCCC---HHHHHHHHhc--CCCEE
Confidence 58899998321 111 1234444333 5699999999998433 222 1222222221 34444
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeC--CCCCCCCHHHHHHHHHHH
Q 007211 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADT--EHDWREGTEQYKFIEHCL 441 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt--~~~~~~~~~Q~~WL~~~L 441 (612)
+.|||+++...-..+++..+ .+. ..-++|.......|+-++.+++++-+++- ......-..-++-+++.+
T Consensus 63 -TlGNH~fD~gel~~~l~~~~------~~l-~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v 134 (255)
T cd07382 63 -TMGNHTWDKKEILDFIDEEP------RLL-RPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELL 134 (255)
T ss_pred -EecccccCcchHHHHHhcCc------Cce-EeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHH
Confidence 55999998642111211100 000 11123322234457778888876555443 211111112234466666
Q ss_pred hhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCcc
Q 007211 442 ASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNY 521 (612)
Q Consensus 442 a~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~ 521 (612)
++.+ .+...+||.+|--. ++ + ...+.. ....+||+++.||+|..---. +.
T Consensus 135 ~~lk-~~~D~IIV~~H~g~--ts-----------E---k~ala~-~ldg~VdvIvGtHTHv~t~d~-----~i------- 184 (255)
T cd07382 135 EELK-EEADIIFVDFHAEA--TS-----------E---KIALGW-YLDGRVSAVVGTHTHVQTADE-----RI------- 184 (255)
T ss_pred HHHh-cCCCEEEEEECCCC--CH-----------H---HHHHHH-hCCCCceEEEeCCCCccCCcc-----EE-------
Confidence 6553 25677999999532 11 1 122332 224469999999999843211 11
Q ss_pred ccCCCCceEEEE-eCCCCCC
Q 007211 522 YKGTLNGTIHVV-AGGGGAG 540 (612)
Q Consensus 522 y~~~~~g~vyiv-~G~gG~~ 540 (612)
-++||.|+. +|+-|..
T Consensus 185 ---l~~gTa~itd~Gm~G~~ 201 (255)
T cd07382 185 ---LPGGTAYITDVGMTGPY 201 (255)
T ss_pred ---eeCCeEEEecCccccCC
Confidence 136777776 6666653
No 61
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=98.05 E-value=0.00023 Score=72.85 Aligned_cols=198 Identities=14% Similarity=0.047 Sum_probs=105.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccch-HHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYAS-LNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.|++++||.=... .... ...+.++.++ .++||++..||++- .|...- ..-.+.+.. ..+-++..
T Consensus 1 m~ilfiGDi~G~~----------Gr~~l~~~L~~lk~~-~~~D~vIaNgEn~~-gG~Gi~-~~~~~~L~~--~GvDviT~ 65 (266)
T TIGR00282 1 IKFLFIGDVYGKA----------GRKIVKNNLPQLKSK-YQADLVIANGENTT-HGKGLT-LKIYEFLKQ--SGVNYITM 65 (266)
T ss_pred CeEEEEEecCCHH----------HHHHHHHHHHHHHHh-CCCCEEEEcCcccC-CCCCCC-HHHHHHHHh--cCCCEEEc
Confidence 3799999984210 1111 1233344333 47999999999994 332111 122222221 25566555
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCC-CC-CC--CHHHHHHHHHHH
Q 007211 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH-DW-RE--GTEQYKFIEHCL 441 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~-~~-~~--~~~Q~~WL~~~L 441 (612)
|||+++....-.+. +.. +. .....++|....+..|..++.++.++-+++-.. .+ .+ ...-++-+++.+
T Consensus 66 -GNH~~Dkge~~~~i---~~~--~~--~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i 137 (266)
T TIGR00282 66 -GNHTWFQKLILDVV---INQ--KD--LVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELI 137 (266)
T ss_pred -cchhccCcHHHHHH---hcc--cc--ccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHH
Confidence 99999854311111 110 10 011123343333445666788887766665321 11 11 111223344555
Q ss_pred hhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCcc
Q 007211 442 ASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNY 521 (612)
Q Consensus 442 a~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~ 521 (612)
++.+ .+.+.+||..|.-- .. .+.....+.+.+|++|+.-|.|..--- .++
T Consensus 138 ~~lk-~~~d~IIVd~Haea----------------ts-EK~a~~~~ldg~vsaVvGtHtHV~TaD-----~~i------- 187 (266)
T TIGR00282 138 NMLK-KDCDLIFVDFHAET----------------TS-EKNAFGMAFDGYVTAVVGTHTHVPTAD-----LRI------- 187 (266)
T ss_pred Hhhh-cCCCEEEEEeCCCC----------------HH-HHHHHHHHhCCCccEEEeCCCCCCCCc-----cee-------
Confidence 5443 24678999999432 01 235566777889999999999984211 111
Q ss_pred ccCCCCceEEEE-eCCCCCC
Q 007211 522 YKGTLNGTIHVV-AGGGGAG 540 (612)
Q Consensus 522 y~~~~~g~vyiv-~G~gG~~ 540 (612)
-++||-|++ +|+.|..
T Consensus 188 ---l~~gtayitD~Gm~G~~ 204 (266)
T TIGR00282 188 ---LPKGTAYITDVGMTGPF 204 (266)
T ss_pred ---CCCCCEEEecCCcccCc
Confidence 146888887 7888864
No 62
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.01 E-value=0.00037 Score=72.59 Aligned_cols=85 Identities=16% Similarity=0.130 Sum_probs=42.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCc-cEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCe-
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY- 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~p-Dfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~- 362 (612)
++|+.++|+|..-.... ....-+.+.+..+..++++. .++ .+++..||++......+.+..-...+ .++..+.+
T Consensus 1 i~il~tnD~Hg~~~~~~-~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~-~~~n~~g~D 78 (288)
T cd07412 1 VQILAINDFHGRLEPPG-KVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTI-EALNAMGVD 78 (288)
T ss_pred CeEEEEeccccCccCCC-CccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHH-HHHHhhCCe
Confidence 47899999995422100 00000112234455555432 234 48999999995443322211101111 22223333
Q ss_pred EEcCCCCccCC
Q 007211 363 MIASGNHERDW 373 (612)
Q Consensus 363 ~~v~GNHD~~~ 373 (612)
+.++||||+++
T Consensus 79 a~t~GNHefd~ 89 (288)
T cd07412 79 ASAVGNHEFDE 89 (288)
T ss_pred eeeeccccccc
Confidence 46789999975
No 63
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=97.97 E-value=7.9e-05 Score=76.54 Aligned_cols=190 Identities=11% Similarity=0.069 Sum_probs=88.7
Q ss_pred eEEEEEeecCCCCCCCC---------CcccccccchHHHHHHHHHhc--C-CccEE-EEeCcccccCCchhHHHHHHHhh
Q 007211 287 QRVVIFGDMGKDEADGS---------NEYNDFQYASLNTTRQLIQDL--K-NIDIV-FHIGDICYANGYISQWDQFTAQI 353 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~---------~~~~~~~~~~~~~~~~i~~~~--~-~pDfv-l~~GDi~Y~~g~~~~wd~f~~~i 353 (612)
++|+.++|+|..-.... ..+.. .+-+..+..++++. . ++|.+ +.+||+...... ..+.+.. .+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~--~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~-~~ 76 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGM--AGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQ-AM 76 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccc--cCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCCh-hH
Confidence 46788888886432110 00111 12234455555542 3 68876 679999955432 2222111 22
Q ss_pred hhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecC-CCCCCceEEEEEeCCEE--EEEEeCCCC--
Q 007211 354 EPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVP-AENRAKFWYSTDYGMFR--FCVADTEHD-- 426 (612)
Q Consensus 354 ~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P-~~~~~~~~Ysfd~G~v~--fi~Ldt~~~-- 426 (612)
-..+..+++.++.||||++.... .+.... .+.+.++ .+...-. ....-+.|.-++.++++ ||.+.+...
T Consensus 77 ~~~l~~~g~da~~GNHefd~g~~--~l~~~~--~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~ 152 (264)
T cd07411 77 VDALNALGVDAMVGHWEFTYGPE--RVRELF--GRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPI 152 (264)
T ss_pred HHHHHhhCCeEEecccccccCHH--HHHHHH--hhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCccc
Confidence 22333467666669999874211 000000 0000111 0000000 00011235567888854 555554321
Q ss_pred CCC--------CHHHHHHHHHHHhhcc-CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 007211 427 WRE--------GTEQYKFIEHCLASVD-RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAI 496 (612)
Q Consensus 427 ~~~--------~~~Q~~WL~~~La~~~-r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~Vdlvl 496 (612)
... -....+.+++.+.+.. ..+...+|++.|-+. . +. + . +.++ .+||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~-~-------------~~--~-~---la~~~~~iDlil 212 (264)
T cd07411 153 ANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGL-P-------------VD--V-E---LAERVPGIDVIL 212 (264)
T ss_pred ccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCc-h-------------hh--H-H---HHhcCCCCcEEE
Confidence 000 0223444544433321 145677999999764 1 00 1 2 2222 5799999
Q ss_pred ecCcccce
Q 007211 497 YGHVHNYE 504 (612)
Q Consensus 497 sGH~H~Ye 504 (612)
.||.|...
T Consensus 213 gGH~H~~~ 220 (264)
T cd07411 213 SGHTHERT 220 (264)
T ss_pred eCcccccc
Confidence 99999743
No 64
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.93 E-value=0.00064 Score=65.14 Aligned_cols=64 Identities=14% Similarity=0.307 Sum_probs=40.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.++++++|+|...+. .....++. ...++|+|||+||.+..... . .+-.. -..+++.+.
T Consensus 2 m~ilviSDtH~~~~~------------~~~~~~~~-~~~~~d~vih~GD~~~~~~~-~---~l~~~-----~~~~i~~V~ 59 (172)
T COG0622 2 MKILVISDTHGPLRA------------IEKALKIF-NLEKVDAVIHAGDSTSPFTL-D---ALEGG-----LAAKLIAVR 59 (172)
T ss_pred cEEEEEeccCCChhh------------hhHHHHHh-hhcCCCEEEECCCcCCccch-H---Hhhcc-----cccceEEEE
Confidence 589999999976420 11122222 23689999999999954322 1 11111 146899999
Q ss_pred CCCccC
Q 007211 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||.|..
T Consensus 60 GN~D~~ 65 (172)
T COG0622 60 GNCDGE 65 (172)
T ss_pred ccCCCc
Confidence 999974
No 65
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.89 E-value=2.9e-05 Score=79.35 Aligned_cols=83 Identities=17% Similarity=0.228 Sum_probs=49.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCch-hHHHHHHHhhhhhhc-C-CC
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIAS-T-VP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~s-~-vP 361 (612)
+||++++|+|.+....... . .......++++++. ..++|+|+++||++...... .....+.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~-~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--R-LAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--h-HHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 4899999999875321100 0 01112234444332 25799999999999654322 222334444555433 3 89
Q ss_pred eEEcCCCCccC
Q 007211 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999974
No 66
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.89 E-value=3e-05 Score=76.81 Aligned_cols=65 Identities=20% Similarity=0.262 Sum_probs=42.4
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----------CCccEEEEeCcccccCCchhHHHHHHHhhhhh---
Q 007211 290 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----------KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--- 356 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~----------~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--- 356 (612)
+++||+|.. ...++++++.. .+.|.++++||++....... +.++.+..+
T Consensus 1 ~vi~DIHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~---~vl~~l~~l~~~ 62 (208)
T cd07425 1 VAIGDLHGD---------------LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVI---EILWLLYKLEQE 62 (208)
T ss_pred CEEeCccCC---------------HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHH---HHHHHHHHHHHH
Confidence 478999854 34567777653 25899999999995433222 233332222
Q ss_pred --hcCCCeEEcCCCCccC
Q 007211 357 --ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 --~s~vP~~~v~GNHD~~ 372 (612)
....+++++.||||..
T Consensus 63 ~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 63 AAKAGGKVHFLLGNHELM 80 (208)
T ss_pred HHhcCCeEEEeeCCCcHH
Confidence 2356899999999974
No 67
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.83 E-value=3.3e-05 Score=83.86 Aligned_cols=83 Identities=14% Similarity=0.235 Sum_probs=51.2
Q ss_pred eEEEEEeecCCCC-CCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCch-hHHHHHHHhhhhhh-cCCC
Q 007211 287 QRVVIFGDMGKDE-ADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIA-STVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~-~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~-s~vP 361 (612)
+||++++|+|.+. ... ...+. ......+.++++. ..++||||++||+....... ..-..+.+.++.+. .++|
T Consensus 1 mkilHtSD~HLG~~~~~--~~~r~-~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ip 77 (390)
T COG0420 1 MKILHTSDWHLGSKQLN--LPSRL-EDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIP 77 (390)
T ss_pred CeeEEecccccchhhcc--Cccch-HHHHHHHHHHHHHHHHccCCEEEEccccccCCCCCHHHHHHHHHHHHHhccCCCc
Confidence 4899999999983 211 10111 1122334443332 16799999999999654321 11234556666554 3799
Q ss_pred eEEcCCCCccC
Q 007211 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
++++.||||..
T Consensus 78 v~~I~GNHD~~ 88 (390)
T COG0420 78 VVVIAGNHDSP 88 (390)
T ss_pred EEEecCCCCch
Confidence 99999999975
No 68
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.83 E-value=0.00029 Score=73.23 Aligned_cols=50 Identities=18% Similarity=0.210 Sum_probs=28.3
Q ss_pred CCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007211 448 KQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 448 ~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
+..-+|++.|-.. +... ..... ... ...+...+...+||++|.||.|...
T Consensus 173 ~~D~VI~lsH~G~-~~~~-~~~~~----~~~-~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 173 KPDIVIAATHMGH-YDNG-EHGSN----APG-DVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred CCCEEEEEecccc-cCCc-ccccc----Cch-HHHHHHhcCCCCCCEEEeCCCCccc
Confidence 5677999999775 2211 00000 010 1233333323589999999999854
No 69
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=97.80 E-value=0.00048 Score=71.43 Aligned_cols=198 Identities=14% Similarity=0.103 Sum_probs=89.7
Q ss_pred CeEEEEEeecCCCCCCCC--Ccc-cccccchHHHHHHHHHh--cCCcc-EEEEeCcccccCCchhHHH-HHHHhhhhhhc
Q 007211 286 LQRVVIFGDMGKDEADGS--NEY-NDFQYASLNTTRQLIQD--LKNID-IVFHIGDICYANGYISQWD-QFTAQIEPIAS 358 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~--~~~-~~~~~~~~~~~~~i~~~--~~~pD-fvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~s 358 (612)
.++|+...|+|..-.... ... ..+ .+....++++.+. ..+++ +++..||........ .+. .--+.+-.++.
T Consensus 5 ~ltILhtnD~Hg~l~~~~~~~~~~~~~-gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~-~~~~~~g~~~~~~mN 82 (282)
T cd07407 5 DINFLHTTDTHGWLGGHLNDPNYSADW-GDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLS-DASPPPGSYSNPIFR 82 (282)
T ss_pred eEEEEEEcccccCCcCcCCcccccCCH-HHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeece-eeecCCChHHHHHHH
Confidence 489999999996421100 000 001 0111222333221 13455 778899999544221 111 00122333444
Q ss_pred CCCe-EEcCCCCccCCCCCC-CCCCCCCCCCcccccc--ceeeecCC--C--CCCceEEEEEeC-CEE--EEEEeCCCC-
Q 007211 359 TVPY-MIASGNHERDWPGTG-SFYGNKDSGGECGVLA--ETMFYVPA--E--NRAKFWYSTDYG-MFR--FCVADTEHD- 426 (612)
Q Consensus 359 ~vP~-~~v~GNHD~~~~~~~-~~y~~~dsgge~g~~~--~~~f~~P~--~--~~~~~~Ysfd~G-~v~--fi~Ldt~~~- 426 (612)
.++| ..++||||++....+ ..+... -.+...|+ .+.+.-.. . .....|.-++.+ +++ ||++-+...
T Consensus 83 ~mgyDa~tlGNHEFd~g~~~l~~l~~~--~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt~~~~ 160 (282)
T cd07407 83 MMPYDLLTIGNHELYNYEVADDEYEGF--VPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLFDFKG 160 (282)
T ss_pred hcCCcEEeecccccCccccHHHHHHHH--HhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEeccccc
Confidence 5555 468999999742211 000000 00000111 11110000 0 011235566766 655 555544321
Q ss_pred ------CCCC--HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCe-EEE
Q 007211 427 ------WREG--TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVD-IAI 496 (612)
Q Consensus 427 ------~~~~--~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~Vd-lvl 496 (612)
+.+. ..+.+|+.+.|++ .+..-+|++.|-.+ .. +.. . .+....+.++. ++| ++|
T Consensus 161 ~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~--~~------d~~----~-~~~~~~la~~~~~id~~Ii 224 (282)
T cd07407 161 AANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPV--RD------DAE----F-KVLHDAIRKIFPDTPIQFL 224 (282)
T ss_pred CCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCC--CC------Ccc----H-HHHHHHHHHhCCCCCEEEE
Confidence 1111 2233488877874 35667999999774 21 111 0 11122333343 577 799
Q ss_pred ecCcccc
Q 007211 497 YGHVHNY 503 (612)
Q Consensus 497 sGH~H~Y 503 (612)
.||.|..
T Consensus 225 ~GHsH~~ 231 (282)
T cd07407 225 GGHSHVR 231 (282)
T ss_pred eCCcccc
Confidence 9999974
No 70
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=97.79 E-value=9.2e-05 Score=79.06 Aligned_cols=125 Identities=14% Similarity=0.075 Sum_probs=73.0
Q ss_pred CCCeEEEEEeecCCCCCCCCCccc----ccccchHHHHHHH---HHhcCCccEEEEeCcccccCC--chhHHHHHHHhhh
Q 007211 284 NSLQRVVIFGDMGKDEADGSNEYN----DFQYASLNTTRQL---IQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIE 354 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~----~~~~~~~~~~~~i---~~~~~~pDfvl~~GDi~Y~~g--~~~~wd~f~~~i~ 354 (612)
+..+|+++++|.|.-....+..+. .|..+ --+.+. .....+||.++++||+.+.+- ..++|.+..+.++
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D--~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~Rfk 123 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGND--WYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFK 123 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhH--HHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHH
Confidence 456999999999987633221111 11110 011111 112368999999999995332 2567766555565
Q ss_pred hhhc---CCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCC
Q 007211 355 PIAS---TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEH 425 (612)
Q Consensus 355 ~l~s---~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~ 425 (612)
.+.. ++|.+.++||||.+.... .-.....||.- ..++...+|+.|++.|+++|++.
T Consensus 124 kIf~~k~~~~~~~i~GNhDIGf~~~------------~~~~~i~Rfe~---~fg~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 124 KIFGRKGNIKVIYIAGNHDIGFGNE------------LIPEWIDRFES---VFGPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred HhhCCCCCCeeEEeCCccccccccc------------cchhHHHHHHH---hhcchhhhhccCCceeEEeeehh
Confidence 5543 799999999999964211 00001122210 01223356899999999999875
No 71
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.78 E-value=0.00033 Score=71.71 Aligned_cols=80 Identities=18% Similarity=0.234 Sum_probs=41.4
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC--CccEEEEeCcccccCCchhHHHHHHHhhhhhhc-CCCeE
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s-~vP~~ 363 (612)
++++.++|+|..-..... +.+.+..+..++++.. +.++++.+||++.... ...+..-...++.+.. .+-+
T Consensus 1 i~il~~~D~H~~~~~~~~-----~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~-~~~~~~g~~~~~~ln~~g~d~- 73 (257)
T cd07408 1 ITILHTNDIHGRIDEDDN-----NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLP-ISDLDKGETIIKIMNAVGYDA- 73 (257)
T ss_pred CEEEEeccCcccccCCCC-----ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCch-hhhhcCCcHHHHHHHhcCCcE-
Confidence 478999999964321100 1122333444444322 5789999999985432 1111111111222212 3444
Q ss_pred EcCCCCccCC
Q 007211 364 IASGNHERDW 373 (612)
Q Consensus 364 ~v~GNHD~~~ 373 (612)
.++||||+++
T Consensus 74 ~~~GNHefd~ 83 (257)
T cd07408 74 VTPGNHEFDY 83 (257)
T ss_pred EccccccccC
Confidence 4689999974
No 72
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.72 E-value=8.3e-05 Score=81.05 Aligned_cols=83 Identities=14% Similarity=0.138 Sum_probs=47.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCchhH-HHHHHHhhhhhhc-CCCe
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQ-WDQFTAQIEPIAS-TVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~-wd~f~~~i~~l~s-~vP~ 362 (612)
+||++++|+|.+..-.. .... ......++++++. ..+||+|+++||+......... ...+.+.+..+.. .+|+
T Consensus 1 mkilh~SDlHlG~~~~~--~~~~-~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p~~~a~~~~~~~l~~L~~~~~~v 77 (407)
T PRK10966 1 MRILHTSDWHLGQNFYS--KSRA-AEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSPPSYARELYNRFVVNLQQTGCQL 77 (407)
T ss_pred CEEEEEcccCCCCcccC--cccH-HHHHHHHHHHHHHHHhcCCCEEEECCccccCCCCcHHHHHHHHHHHHHHHhcCCcE
Confidence 48999999998743100 0000 0011223333332 2689999999999954322211 1223333333332 6899
Q ss_pred EEcCCCCccC
Q 007211 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
++++||||..
T Consensus 78 ~~I~GNHD~~ 87 (407)
T PRK10966 78 VVLAGNHDSV 87 (407)
T ss_pred EEEcCCCCCh
Confidence 9999999974
No 73
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.70 E-value=8.3e-05 Score=79.26 Aligned_cols=83 Identities=17% Similarity=0.246 Sum_probs=49.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCC-chhHHHHHHHh--hhhhh-cCC
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQ--IEPIA-STV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g-~~~~wd~f~~~--i~~l~-s~v 360 (612)
+||++++|+|.+..... . .........++++++. ..++|+|+++||+..... ....-..|... ++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~-~--~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDD-P--WFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCC-h--hhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 48999999999753211 1 0011112344554432 268999999999996532 22111123332 33332 379
Q ss_pred CeEEcCCCCccC
Q 007211 361 PYMIASGNHERD 372 (612)
Q Consensus 361 P~~~v~GNHD~~ 372 (612)
|++.++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
No 74
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=97.66 E-value=0.0008 Score=69.83 Aligned_cols=79 Identities=14% Similarity=0.075 Sum_probs=45.0
Q ss_pred eEEEEEeCCEE--EEEEeCCCC--CC---CC---HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCc
Q 007211 407 FWYSTDYGMFR--FCVADTEHD--WR---EG---TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAE 476 (612)
Q Consensus 407 ~~Ysfd~G~v~--fi~Ldt~~~--~~---~~---~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~ 476 (612)
.|.-++.++++ ||.+-+... +. .+ .+..+.+++.+++.+..+..-+|++.|-.. . .
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~--------~------~ 196 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGY--------E------V 196 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCc--------h------h
Confidence 35567888855 455544321 00 01 233455666666654345677899999664 0 0
Q ss_pred hhhHHHHHHHHHhcCCeEEEecCcccce
Q 007211 477 PMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 477 ~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
. + .|...+ .+||++|.||.|...
T Consensus 197 d--~-~la~~~--~giD~IiggH~H~~~ 219 (281)
T cd07409 197 D--K-EIARKV--PGVDVIVGGHSHTFL 219 (281)
T ss_pred H--H-HHHHcC--CCCcEEEeCCcCccc
Confidence 0 1 222222 589999999999964
No 75
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.65 E-value=0.00018 Score=67.48 Aligned_cols=54 Identities=11% Similarity=0.225 Sum_probs=34.3
Q ss_pred HHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCCCc
Q 007211 315 NTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHE 370 (612)
Q Consensus 315 ~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GNHD 370 (612)
+.++.+.++..+.|++|.+||+.-.+....+|..++.- .....+|.|++-||||
T Consensus 15 ~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~ 68 (150)
T cd07380 15 EKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP 68 (150)
T ss_pred HHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC
Confidence 44555544456799999999999554433333333332 1234788888989986
No 76
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.62 E-value=0.0001 Score=73.06 Aligned_cols=72 Identities=18% Similarity=0.192 Sum_probs=46.3
Q ss_pred EEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCccEEEEeCccccc-CCchhHHHHHHHh----hhhhhc-CCCeE
Q 007211 291 IFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYA-NGYISQWDQFTAQ----IEPIAS-TVPYM 363 (612)
Q Consensus 291 v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~pDfvl~~GDi~Y~-~g~~~~wd~f~~~----i~~l~s-~vP~~ 363 (612)
+++|.|.++.. |.....+...+++ ..+.|.++++||++.. -|. ..|.++.++ +..++. .+|++
T Consensus 2 FISDlHL~~~~---------p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~-~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 2 FISDLHLGPKR---------PALTAFFLDFLREEAAQADALYILGDIFDGWIGD-DEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred eeeccccCCCC---------cHHHHHHHHHHHhccccCcEEEEechhhhhhhcC-CcccHHHHHHHHHHHHHHhcCCeEE
Confidence 68999988431 2233455555554 2356999999999953 122 245554444 333444 59999
Q ss_pred EcCCCCccC
Q 007211 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||+-
T Consensus 72 ~i~GN~Dfl 80 (237)
T COG2908 72 YIHGNHDFL 80 (237)
T ss_pred EecCchHHH
Confidence 999999964
No 77
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.61 E-value=0.00075 Score=83.13 Aligned_cols=196 Identities=16% Similarity=0.158 Sum_probs=90.1
Q ss_pred CCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEE-eCcccccCCchhHHHHHHHhhhhhhcCCC
Q 007211 283 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFH-IGDICYANGYISQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~-~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP 361 (612)
+...++|++++|+|..- .+ + ......++++.+ .+++.++. +||++.... ...+.+-...++. +..+.
T Consensus 657 ~~~~l~Il~~nD~Hg~l-~g------~-~r~~~~i~~~r~--~~~~~l~ld~GD~~~gs~-~~~~~~g~~~~~~-ln~lg 724 (1163)
T PRK09419 657 DNWELTILHTNDFHGHL-DG------A-AKRVTKIKEVKE--ENPNTILVDAGDVYQGSL-YSNLLKGLPVLKM-MKEMG 724 (1163)
T ss_pred CceEEEEEEEeecccCC-CC------H-HHHHHHHHHHHh--hCCCeEEEecCCCCCCcc-hhhhcCChHHHHH-HhCcC
Confidence 33459999999999431 11 0 111223333333 46777655 999985432 1211111112222 22233
Q ss_pred e-EEcCCCCccCCCCCC--CCCCCCCCC-C-------cccccc--ceeeecCCCC---CCceEEEEEeCCEE--EEEEeC
Q 007211 362 Y-MIASGNHERDWPGTG--SFYGNKDSG-G-------ECGVLA--ETMFYVPAEN---RAKFWYSTDYGMFR--FCVADT 423 (612)
Q Consensus 362 ~-~~v~GNHD~~~~~~~--~~y~~~dsg-g-------e~g~~~--~~~f~~P~~~---~~~~~Ysfd~G~v~--fi~Ldt 423 (612)
+ +.++||||+++.... .+.. ..+ . ....|+ .+.+...... ....|.-++.++++ ||++-+
T Consensus 725 ~d~~~~GNHEfd~g~~~l~~~l~--~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt 802 (1163)
T PRK09419 725 YDASTFGNHEFDWGPDVLPDWLK--GGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTT 802 (1163)
T ss_pred CCEEEecccccccChHHHHHHHH--hcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecc
Confidence 3 559999999753210 0000 000 0 000111 1111111111 11345667888855 566544
Q ss_pred CCC--C-CC----C---HHHHHHHHHHHhhcc-CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cC
Q 007211 424 EHD--W-RE----G---TEQYKFIEHCLASVD-RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YK 491 (612)
Q Consensus 424 ~~~--~-~~----~---~~Q~~WL~~~La~~~-r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~ 491 (612)
... + .+ + .+..+.+++..++.+ ..+...+|++.|... ... . ..+ ......|.++ -+
T Consensus 803 ~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~-~~d-~---~~~-------~~~~~~lA~~v~g 870 (1163)
T PRK09419 803 PETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGS-NQD-R---TTG-------EITGLELAKKVKG 870 (1163)
T ss_pred cccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCc-ccc-c---ccc-------ccHHHHHHHhCCC
Confidence 321 0 00 0 122333444443332 145777999999875 111 0 001 1123344444 37
Q ss_pred CeEEEecCcccce
Q 007211 492 VDIAIYGHVHNYE 504 (612)
Q Consensus 492 VdlvlsGH~H~Ye 504 (612)
||++|.||.|..-
T Consensus 871 IDvIigGHsH~~~ 883 (1163)
T PRK09419 871 VDAIISAHTHTLV 883 (1163)
T ss_pred CCEEEeCCCCccc
Confidence 9999999999853
No 78
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.56 E-value=0.0011 Score=75.35 Aligned_cols=200 Identities=16% Similarity=0.165 Sum_probs=87.9
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc------CC-ccEEEEeCcccccCCchhHHHHHHHhhhhh
Q 007211 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL------KN-IDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~------~~-pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
...++|+.+.|+|..-... .+... + +..+..++++. .+ .-+++..||+.... ....+..- +.+-.+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~--~~~~~--G-~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g-~~~i~~ 104 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRN--EYGEY--G-LAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDA-EPDFRG 104 (551)
T ss_pred ceEEEEEEecccCCCcccc--ccCCc--c-HHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCC-chhHHH
Confidence 3458999999999753210 01111 1 22233333321 12 35888999998532 12211110 011112
Q ss_pred hcCCCe-EEcCCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecC-CCCCCceEEEEEeCCEE--EEEEeCCCC--C-
Q 007211 357 ASTVPY-MIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVP-AENRAKFWYSTDYGMFR--FCVADTEHD--W- 427 (612)
Q Consensus 357 ~s~vP~-~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P-~~~~~~~~Ysfd~G~v~--fi~Ldt~~~--~- 427 (612)
+..+.+ ..++||||+++... .+..... +...|+ .+...-. ....-..|.-++.++++ ||++-+... +
T Consensus 105 mN~~g~Da~tlGNHEFD~G~~--~L~~~~~--~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~ 180 (551)
T PRK09558 105 MNLIGYDAMAVGNHEFDNPLS--VLRKQEK--WAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIG 180 (551)
T ss_pred HhcCCCCEEcccccccCcCHH--HHHHhhc--cCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEecccccccc
Confidence 222222 34679999986321 1110000 000111 0111000 00112345667888865 455543321 1
Q ss_pred CCC-------HHHHHHHHHHHhhccC-CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc---CCeEEE
Q 007211 428 REG-------TEQYKFIEHCLASVDR-QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY---KVDIAI 496 (612)
Q Consensus 428 ~~~-------~~Q~~WL~~~La~~~r-~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~---~Vdlvl 496 (612)
.+. .+..+-+++.+++.+. .+..-+|++.|..+ ..... .+ +.. ..-..|.++. +||++|
T Consensus 181 ~~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~-~~~~~----~~---~~~--~~d~~la~~~~~~~IDvIl 250 (551)
T PRK09558 181 NPEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGH-YDDGE----HG---SNA--PGDVEMARSLPAGGLDMIV 250 (551)
T ss_pred CCCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEecccc-ccCCc----cC---CCC--ccHHHHHHhCCccCceEEE
Confidence 000 1112223333333321 35777999999876 21110 00 000 0112334443 799999
Q ss_pred ecCcccce
Q 007211 497 YGHVHNYE 504 (612)
Q Consensus 497 sGH~H~Ye 504 (612)
.||.|.+-
T Consensus 251 gGHsH~~~ 258 (551)
T PRK09558 251 GGHSQDPV 258 (551)
T ss_pred eCCCCccc
Confidence 99999853
No 79
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.30 E-value=0.0011 Score=74.76 Aligned_cols=203 Identities=14% Similarity=0.131 Sum_probs=95.5
Q ss_pred CCCCCeEEEEEeecCCCCCCCCCccccccc--chHH----HHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhh
Q 007211 282 GQNSLQRVVIFGDMGKDEADGSNEYNDFQY--ASLN----TTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (612)
Q Consensus 282 g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~--~~~~----~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 355 (612)
.....++|+...|+|..-... .+..... +.+. .++++.++ .+..++|..||+......... ..-.+.+-.
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~--~~~~~~~~~~g~~~~~~~v~~~ra~-~~~~llld~GD~~~G~~l~~~-~~~g~~~~~ 97 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPY--DYDDDGDTDGGLARIATLVKQLRAE-NKNVLLLDAGDLIQGSPLSDY-LTKGEPTVD 97 (517)
T ss_pred cCceeEEEEEeccccccceec--cccccCcccccHHHHHHHHHHHHhh-cCCeEEEeCCcccCCcccccc-ccCCChHHH
Confidence 344569999999999764310 1110001 1122 22333322 345689999999965433221 000111112
Q ss_pred hhcCCCe-EEcCCCCccCCCCCCCCCCCCCCCCcccccc--ceeeecCC--CCCCceEEEEEeCCEE--EEEEeCCC--C
Q 007211 356 IASTVPY-MIASGNHERDWPGTGSFYGNKDSGGECGVLA--ETMFYVPA--ENRAKFWYSTDYGMFR--FCVADTEH--D 426 (612)
Q Consensus 356 l~s~vP~-~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P~--~~~~~~~Ysfd~G~v~--fi~Ldt~~--~ 426 (612)
++..++| ..++||||++.... ++...- .+...|+ .+.+.-+. ....+.|.-++.++++ +|++.+.. .
T Consensus 98 ~mN~m~yDa~tiGNHEFd~g~~--~l~~~~--~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~ 173 (517)
T COG0737 98 LLNALGYDAMTLGNHEFDYGLE--ALARLL--DEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPT 173 (517)
T ss_pred HHhhcCCcEEeecccccccCHH--HHHHHH--hccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcccc
Confidence 2333443 45899999985321 000000 0000111 11111111 1123567788888854 56665421 1
Q ss_pred CCC--------CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEec
Q 007211 427 WRE--------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYG 498 (612)
Q Consensus 427 ~~~--------~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsG 498 (612)
+.. -.+..+++++.+.+.++....-+|++.|-++ ...... .... ... ..... ..+|+++.|
T Consensus 174 ~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~-~~d~~~-~~~~--~~~--~~~~~-----~~iD~i~~G 242 (517)
T COG0737 174 WEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGI-EDDLEL-ASEV--PGD--VDVAV-----PGIDLIIGG 242 (517)
T ss_pred cccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCc-Cccccc-cccc--ccc--ccccc-----cCcceEecc
Confidence 111 1244566666666654333567999999886 222111 1000 000 11111 349999999
Q ss_pred Ccccc
Q 007211 499 HVHNY 503 (612)
Q Consensus 499 H~H~Y 503 (612)
|.|.+
T Consensus 243 H~H~~ 247 (517)
T COG0737 243 HSHTV 247 (517)
T ss_pred CCccc
Confidence 99964
No 80
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.13 E-value=0.00094 Score=64.02 Aligned_cols=56 Identities=21% Similarity=0.273 Sum_probs=34.8
Q ss_pred HHHHHHHhcCCccEEEEeCcccccCCch-hHHHHHHHhhhhhhcCCCeEEcCCCCccC
Q 007211 316 TTRQLIQDLKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 316 ~~~~i~~~~~~pDfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~s~vP~~~v~GNHD~~ 372 (612)
.+.+++++ .+||.|+++||+++..... .+..............+|++.+.||||..
T Consensus 32 ~l~~~~~~-~~~d~lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 32 RLDRLIEE-YGPERLIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHHh-cCCCEEEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 33344433 6899999999999654321 11111111233334578999999999974
No 81
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.06 E-value=0.0081 Score=68.26 Aligned_cols=78 Identities=15% Similarity=0.121 Sum_probs=41.1
Q ss_pred eEEEEEeCC--EEEEEEeCCCC-C---CCC-----HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCC
Q 007211 407 FWYSTDYGM--FRFCVADTEHD-W---REG-----TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFA 475 (612)
Q Consensus 407 ~~Ysfd~G~--v~fi~Ldt~~~-~---~~~-----~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~ 475 (612)
.|.-++.++ +-||+|.+... . .++ .+..+=+++..++.++.+..-+|++.|... ..
T Consensus 130 p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~--~~----------- 196 (550)
T TIGR01530 130 PSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGF--EK----------- 196 (550)
T ss_pred ceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCc--HH-----------
Confidence 456678887 55677755211 1 111 011122222222222235677899999653 10
Q ss_pred chhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007211 476 EPMGRESLQKLWQK-YKVDIAIYGHVHNYE 504 (612)
Q Consensus 476 ~~~~r~~l~~l~~k-~~VdlvlsGH~H~Ye 504 (612)
. ..+.++ .+||++|.||.|.+-
T Consensus 197 -d------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 197 -N------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred -H------HHHHhcCCCCCEEEeCCCCccc
Confidence 0 112333 379999999999954
No 82
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.02 E-value=0.0014 Score=66.46 Aligned_cols=76 Identities=16% Similarity=0.301 Sum_probs=47.1
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----CCccEEEEeCcccccCC----c---------hhHHHHHHHh
Q 007211 290 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----KNIDIVFHIGDICYANG----Y---------ISQWDQFTAQ 352 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~~pDfvl~~GDi~Y~~g----~---------~~~wd~f~~~ 352 (612)
++++|+|.+... ........+.+.++.. .++|.|+++||++.... . ...++.+.+.
T Consensus 2 ~~iSDlHl~~~~-------~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T cd07386 2 VFISDVHVGSKT-------FLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEY 74 (243)
T ss_pred EEecccCCCchh-------hhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHH
Confidence 688999976421 0111122333333322 25799999999996421 0 1224455566
Q ss_pred hhhhhcCCCeEEcCCCCccC
Q 007211 353 IEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 353 i~~l~s~vP~~~v~GNHD~~ 372 (612)
++.+.+.+|+++++||||..
T Consensus 75 l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 75 LSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHhcccCCeEEEeCCCCCcc
Confidence 67777789999999999974
No 83
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.02 E-value=0.0016 Score=67.28 Aligned_cols=65 Identities=17% Similarity=0.287 Sum_probs=44.2
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
+++++||.|.+ ...+++++++. .+.|.++++||++.. |..+ .+.++.+..+ ..++.+
T Consensus 2 ~~~vIGDIHG~---------------~~~l~~ll~~~~~~~~~D~li~lGDlVdr-Gp~s--~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 2 ATYAIGDIQGC---------------YDELQRLLEKIDFDPAKDTLWLVGDLVNR-GPDS--LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred cEEEEEccCCC---------------HHHHHHHHHhcCCCCCCCEEEEeCCccCC-CcCH--HHHHHHHHhc--CCCeEE
Confidence 58999999854 34566666654 368999999999954 4332 2333443333 346889
Q ss_pred cCCCCccC
Q 007211 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||..
T Consensus 62 VlGNHD~~ 69 (275)
T PRK00166 62 VLGNHDLH 69 (275)
T ss_pred EecChhHH
Confidence 99999973
No 84
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.01 E-value=0.0016 Score=65.68 Aligned_cols=67 Identities=19% Similarity=0.287 Sum_probs=44.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----C--------CccEEEEeCcccccCCchhHHHHHHHhhhh
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----K--------NIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~--------~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 355 (612)
|++++||.|.. ...+++++++. . +.|.++++||++.. |..+ .+-++.+..
T Consensus 2 ~i~vigDIHG~---------------~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDr-G~~s--~evl~~l~~ 63 (234)
T cd07423 2 PFDIIGDVHGC---------------YDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDR-GPDS--PEVLRLVMS 63 (234)
T ss_pred CeEEEEECCCC---------------HHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCC-CCCH--HHHHHHHHH
Confidence 68999999864 34566666653 1 36899999999954 4322 233444443
Q ss_pred hhcCCCeEEcCCCCccC
Q 007211 356 IASTVPYMIASGNHERD 372 (612)
Q Consensus 356 l~s~vP~~~v~GNHD~~ 372 (612)
+...-.+..+.||||..
T Consensus 64 l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 64 MVAAGAALCVPGNHDNK 80 (234)
T ss_pred HhhCCcEEEEECCcHHH
Confidence 33334678999999963
No 85
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.00 E-value=0.0012 Score=63.04 Aligned_cols=77 Identities=16% Similarity=0.226 Sum_probs=43.0
Q ss_pred EEEeecCCCCCCCC----CcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007211 290 VIFGDMGKDEADGS----NEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 290 ~v~GD~g~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.+++|+|.+..... ..+...+......++.+.+...++|.|+++||++.... ...+ .+.++.+ ..|++.+
T Consensus 2 ~~isD~Hlg~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~d~vi~~GDl~~~~~-~~~~---~~~l~~~--~~~~~~v 75 (168)
T cd07390 2 YFTSDTHFGHANILRFCNRPFDDVEEMDEALIRNWNETVGPDDTVYHLGDFSFGGK-AGTE---LELLSRL--NGRKHLI 75 (168)
T ss_pred eEecccccCCHHHHccCCCCCCCHHHHHHHHHHHHhhhcCCCCEEEEeCCCCCCCC-hHHH---HHHHHhC--CCCeEEE
Confidence 46788888754210 01111111111234444444567999999999996433 2222 2333332 4689999
Q ss_pred CCCCccC
Q 007211 366 SGNHERD 372 (612)
Q Consensus 366 ~GNHD~~ 372 (612)
+||||..
T Consensus 76 ~GNHD~~ 82 (168)
T cd07390 76 KGNHDSS 82 (168)
T ss_pred eCCCCch
Confidence 9999974
No 86
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.97 E-value=0.0014 Score=65.73 Aligned_cols=84 Identities=13% Similarity=0.072 Sum_probs=50.5
Q ss_pred eEEEEEeecCCCCCCCCCccccccc--chHHHHHHHHHh--cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQY--ASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~--~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~ 362 (612)
-+.++++|.|.+............| ...++++++.+. ..+||.|+++||+.+.......|..+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 3689999999874210000000011 112345555442 257999999999997654434555555555543 3599
Q ss_pred EEcCCCCccC
Q 007211 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
+.+.||||..
T Consensus 93 ~~V~GNHD~~ 102 (225)
T TIGR00024 93 ILIRGNHDAL 102 (225)
T ss_pred EEECCCCCCc
Confidence 9999999963
No 87
>PHA02239 putative protein phosphatase
Probab=96.94 E-value=0.0018 Score=65.36 Aligned_cols=67 Identities=15% Similarity=0.266 Sum_probs=41.0
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc----CCccEEEEeCcccccCCchhHHHHHHHhhhh-hhcCCCe
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL----KNIDIVFHIGDICYANGYISQWDQFTAQIEP-IASTVPY 362 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~----~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~-l~s~vP~ 362 (612)
|++++||.|... ..++++++.. ...|.++++||+++ .|..+. +..+.+.. +....++
T Consensus 2 ~~~~IsDIHG~~---------------~~l~~ll~~i~~~~~~~d~li~lGD~iD-rG~~s~--~v~~~l~~~~~~~~~~ 63 (235)
T PHA02239 2 AIYVVPDIHGEY---------------QKLLTIMDKINNERKPEETIVFLGDYVD-RGKRSK--DVVNYIFDLMSNDDNV 63 (235)
T ss_pred eEEEEECCCCCH---------------HHHHHHHHHHhhcCCCCCEEEEecCcCC-CCCChH--HHHHHHHHHhhcCCCe
Confidence 689999999431 2234444332 23599999999995 443321 22222222 2234578
Q ss_pred EEcCCCCccC
Q 007211 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
+.++||||..
T Consensus 64 ~~l~GNHE~~ 73 (235)
T PHA02239 64 VTLLGNHDDE 73 (235)
T ss_pred EEEECCcHHH
Confidence 9999999963
No 88
>PRK04036 DNA polymerase II small subunit; Validated
Probab=96.84 E-value=0.0034 Score=70.45 Aligned_cols=82 Identities=13% Similarity=0.290 Sum_probs=51.1
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH-h-------cCCccEEEEeCcccccCCc-------------
Q 007211 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-D-------LKNIDIVFHIGDICYANGY------------- 342 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~-~-------~~~pDfvl~~GDi~Y~~g~------------- 342 (612)
....++++++|+|.+... + ....+..+.+.+. . ..+++.++++||++...+.
T Consensus 241 ~~~~~i~~ISDlHlgs~~----~---~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~ 313 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKE----F---LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDI 313 (504)
T ss_pred CCccEEEEEcccCCCCcc----h---hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhh
Confidence 345899999999987531 1 1111222222222 1 2579999999999964221
Q ss_pred hhHHHHHHHhhhhhhcCCCeEEcCCCCccC
Q 007211 343 ISQWDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 343 ~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~ 372 (612)
..+++.+.+.++.+.+.+|+++++||||..
T Consensus 314 ~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 314 YEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 112334555566666789999999999974
No 89
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=96.83 E-value=0.0028 Score=62.58 Aligned_cols=63 Identities=16% Similarity=0.199 Sum_probs=42.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
|++++||.|.. ...++++++.. .++|.++++||+++..... .+.++.+. ..+++.
T Consensus 2 ri~~isDiHg~---------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~---~~~~~~l~----~~~~~~ 59 (207)
T cd07424 2 RDFVVGDIHGH---------------YSLLQKALDAVGFDPARDRLISVGDLIDRGPES---LACLELLL----EPWFHA 59 (207)
T ss_pred CEEEEECCCCC---------------HHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCH---HHHHHHHh----cCCEEE
Confidence 68999999843 23456666543 3589999999999544322 23333332 246889
Q ss_pred cCCCCccC
Q 007211 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999964
No 90
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.82 E-value=0.003 Score=64.21 Aligned_cols=66 Identities=18% Similarity=0.220 Sum_probs=43.3
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc-----------CCccEEEEeCcccccCCchhHHHHHHHhhhhh
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL-----------KNIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----------~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
|++++||.|.. ...++++++.. ++-|.++++||+++ .|..+ .+-++.+..+
T Consensus 2 ~~~vIGDIHG~---------------~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliD-RGp~S--~~vl~~~~~~ 63 (245)
T PRK13625 2 KYDIIGDIHGC---------------YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTD-RGPHS--LRMIEIVWEL 63 (245)
T ss_pred ceEEEEECccC---------------HHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccC-CCcCh--HHHHHHHHHH
Confidence 68999999854 34566666652 12478999999995 45433 1233333333
Q ss_pred hcCCCeEEcCCCCcc
Q 007211 357 ASTVPYMIASGNHER 371 (612)
Q Consensus 357 ~s~vP~~~v~GNHD~ 371 (612)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 344578999999995
No 91
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=96.67 E-value=0.0044 Score=62.04 Aligned_cols=66 Identities=18% Similarity=0.238 Sum_probs=42.5
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC----------CccEEEEeCcccccCCchhHHHHHHHhhhhhhc
Q 007211 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s 358 (612)
+.++||.|-. ...+++++++.. ..|.++++||++.. |..+ .+.++.+..+..
T Consensus 1 ~~vIGDIHG~---------------~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDR-Gp~S--~~vl~~l~~l~~ 62 (222)
T cd07413 1 YDFIGDIHGH---------------AEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDR-GPEI--RELLEIVKSMVD 62 (222)
T ss_pred CEEEEeccCC---------------HHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCC-CCCH--HHHHHHHHHhhc
Confidence 3689999854 345666666531 35899999999944 4332 233444433333
Q ss_pred CCCeEEcCCCCccC
Q 007211 359 TVPYMIASGNHERD 372 (612)
Q Consensus 359 ~vP~~~v~GNHD~~ 372 (612)
.-.++.+.||||..
T Consensus 63 ~~~~~~l~GNHE~~ 76 (222)
T cd07413 63 AGHALAVMGNHEFN 76 (222)
T ss_pred CCCEEEEEccCcHH
Confidence 34688899999963
No 92
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=96.61 E-value=0.023 Score=59.95 Aligned_cols=39 Identities=28% Similarity=0.181 Sum_probs=24.9
Q ss_pred CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007211 447 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 504 (612)
Q Consensus 447 ~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~VdlvlsGH~H~Ye 504 (612)
.+..-+|++.|-.- +. +. ..|.++ -+||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~-~~------------~d------~~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQ-IS------------IE------QALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccc-cc------------hH------HHHHhcCCCCCEEEeCCCCccC
Confidence 45667899999531 11 01 123344 379999999999863
No 93
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.59 E-value=0.026 Score=66.41 Aligned_cols=96 Identities=20% Similarity=0.242 Sum_probs=47.0
Q ss_pred EcCCCCCCCCCeEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CCc-cEEEEeCcccccCCchhHHHH--
Q 007211 276 KASPYPGQNSLQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQWDQ-- 348 (612)
Q Consensus 276 ~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~i~~~~--~~p-Dfvl~~GDi~Y~~g~~~~wd~-- 348 (612)
.+.|..+..-.+||+...|+|..-... ..+.. -..+.+..+..++++. +++ -++|..||++...-.. .+..
T Consensus 105 ~~~~~~~~~~~LtIL~TnDiHg~l~~~-dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~-~~~a~~ 182 (814)
T PRK11907 105 TSKPVEGQTVDVRILSTTDLHTNLVNY-DYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLG-TYKAIV 182 (814)
T ss_pred cCCCccCCceEEEEEEEEeecCCcccc-cccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCccc-chhhhc
Confidence 344554445569999999999764211 00100 0111233333344331 223 4889999999643211 1100
Q ss_pred ---HH---HhhhhhhcCCCe-EEcCCCCccCC
Q 007211 349 ---FT---AQIEPIASTVPY-MIASGNHERDW 373 (612)
Q Consensus 349 ---f~---~~i~~l~s~vP~-~~v~GNHD~~~ 373 (612)
+. ..+-.++..+.| ..++||||+++
T Consensus 183 ~~~~~g~~~P~i~amN~LGyDA~tLGNHEFDy 214 (814)
T PRK11907 183 DPVEEGEQHPMYAALEALGFDAGTLGNHEFNY 214 (814)
T ss_pred cccccCcchHHHHHHhccCCCEEEechhhccc
Confidence 00 011122233333 45899999985
No 94
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.56 E-value=0.046 Score=50.78 Aligned_cols=80 Identities=11% Similarity=0.159 Sum_probs=43.6
Q ss_pred EEEEEeecCCCCCCC--CCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007211 288 RVVIFGDMGKDEADG--SNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 288 rf~v~GD~g~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.+.++||+|.+...- ..++.+...-....+....+....-|.+.|+||++....... .....++.+-.++ ..+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~~---~a~~IlerLnGrk--hlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRER---AAGLILERLNGRK--HLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchhh---HHHHHHHHcCCcE--EEe
Confidence 467788998875421 112222111111223333333455689999999995443322 3334445443333 789
Q ss_pred CCCCccC
Q 007211 366 SGNHERD 372 (612)
Q Consensus 366 ~GNHD~~ 372 (612)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999964
No 95
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=96.53 E-value=0.0056 Score=61.08 Aligned_cols=63 Identities=19% Similarity=0.226 Sum_probs=41.8
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
|++++||.|.. ...+++++++. .+.|-++++||++.. |..+ .+-++.+. ...+..
T Consensus 18 ri~vigDIHG~---------------~~~L~~lL~~i~~~~~~D~li~lGDlvDr-Gp~s--~~vl~~l~----~~~~~~ 75 (218)
T PRK11439 18 HIWLVGDIHGC---------------FEQLMRKLRHCRFDPWRDLLISVGDLIDR-GPQS--LRCLQLLE----EHWVRA 75 (218)
T ss_pred eEEEEEcccCC---------------HHHHHHHHHhcCCCcccCEEEEcCcccCC-CcCH--HHHHHHHH----cCCceE
Confidence 89999999864 34566666653 257899999999954 4322 12223322 124678
Q ss_pred cCCCCccC
Q 007211 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||..
T Consensus 76 v~GNHE~~ 83 (218)
T PRK11439 76 VRGNHEQM 83 (218)
T ss_pred eeCchHHH
Confidence 99999963
No 96
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=96.40 E-value=0.0078 Score=60.06 Aligned_cols=63 Identities=16% Similarity=0.293 Sum_probs=41.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
-|++++||.|.+ ...+++++++. .+.|.++++||+++.+.... +.++.+. .-.++
T Consensus 15 ~ri~visDiHg~---------------~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~---~~l~~l~----~~~~~ 72 (218)
T PRK09968 15 RHIWVVGDIHGE---------------YQLLQSRLHQLSFCPETDLLISVGDNIDRGPESL---NVLRLLN----QPWFI 72 (218)
T ss_pred CeEEEEEeccCC---------------HHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHH---HHHHHHh----hCCcE
Confidence 389999999854 34456666554 36899999999995433221 2222222 22467
Q ss_pred EcCCCCcc
Q 007211 364 IASGNHER 371 (612)
Q Consensus 364 ~v~GNHD~ 371 (612)
.+.||||.
T Consensus 73 ~v~GNHE~ 80 (218)
T PRK09968 73 SVKGNHEA 80 (218)
T ss_pred EEECchHH
Confidence 89999996
No 97
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=96.40 E-value=0.0025 Score=64.18 Aligned_cols=173 Identities=23% Similarity=0.318 Sum_probs=94.7
Q ss_pred EEEEeCcccccCCc-h------hHHHHHHHh----hhhhhcCCCeEEcCCCCccCCCCC---CCCCCCC--C---CCCcc
Q 007211 329 IVFHIGDICYANGY-I------SQWDQFTAQ----IEPIASTVPYMIASGNHERDWPGT---GSFYGNK--D---SGGEC 389 (612)
Q Consensus 329 fvl~~GDi~Y~~g~-~------~~wd~f~~~----i~~l~s~vP~~~v~GNHD~~~~~~---~~~y~~~--d---sgge~ 389 (612)
=++..||++.+.|- . .++.+|... +.++.-.+|+|+-.||||.+-... -.+|... + .....
T Consensus 129 GlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr~ 208 (392)
T COG5555 129 GLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHRS 208 (392)
T ss_pred eEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcCc
Confidence 46777899966542 1 122222221 233444799999999999863211 1122100 0 00000
Q ss_pred ccccceeeecCCC--CCCceEEEEEeCCEEEEEEeCCCCC-CCC-HHHHHHHHHHHhhccCCCCCEEEEEEeccc-ccCC
Q 007211 390 GVLAETMFYVPAE--NRAKFWYSTDYGMFRFCVADTEHDW-REG-TEQYKFIEHCLASVDRQKQPWLIFLAHRVL-GYSS 464 (612)
Q Consensus 390 g~~~~~~f~~P~~--~~~~~~Ysfd~G~v~fi~Ldt~~~~-~~~-~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~-~yss 464 (612)
++-++. +.|.. +..+.-||+|+|++|.+-+-+...- .++ ..-+-||+.+|.......+| ++++.|.-. .+++
T Consensus 209 ~vf~Kp--pvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aadgrp-v~LfqhyGwdtfst 285 (392)
T COG5555 209 DVFWKP--PVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAADGRP-VYLFQHYGWDTFST 285 (392)
T ss_pred CcccCC--CCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeeccCCCc-eeehhhhCccceec
Confidence 000100 11211 2234458999999988877543211 011 12357999999875545566 888888632 2343
Q ss_pred CccccC------CCC-----CCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007211 465 GIFYAV------DGS-----FAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 465 ~~~~~~------~~~-----~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
..|.+. .+. ...+. |..|...++-|+|...+.||.|...-
T Consensus 286 eawdpAsrT~Dd~Gsgaphww~a~e-r~all~~lqGYNvvg~fhGhkhd~~m 336 (392)
T COG5555 286 EAWDPASRTLDDTGSGAPHWWPAPE-RGALLFFLQGYNVVGTFHGHKHDFNM 336 (392)
T ss_pred cccCchhcccccCCCCCCCCCCCCC-cchHHHhhcCceeEEeccccccccce
Confidence 333221 111 11222 77899999999999999999998743
No 98
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.31 E-value=0.033 Score=68.93 Aligned_cols=48 Identities=25% Similarity=0.294 Sum_probs=29.7
Q ss_pred CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007211 447 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 504 (612)
Q Consensus 447 ~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~VdlvlsGH~H~Ye 504 (612)
.+..-+|++.|-.+ ..+.. ..+ . .+....|.++ -+||++|.||.|..-
T Consensus 233 ~gaDvII~l~H~G~--~~~~~--~~~-----~-en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGI--ESEYQ--SSG-----A-EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCc--CCCCC--CCC-----c-chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 45777999999875 11110 011 1 2233445544 489999999999964
No 99
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=96.29 E-value=0.055 Score=54.57 Aligned_cols=171 Identities=15% Similarity=0.086 Sum_probs=83.9
Q ss_pred CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCC
Q 007211 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR 404 (612)
Q Consensus 325 ~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~ 404 (612)
.++||||..|.++ +.|.---...+.+.++ ..+-+ .+.|||=++..+...+.+.. . ..-.-.++|....
T Consensus 26 ~~~DfVIaNgENa-a~G~Git~~~~~~L~~---~GvDv-iT~GNH~wdkkei~~~i~~~---~----~ilRPaN~p~~~p 93 (253)
T PF13277_consen 26 YGIDFVIANGENA-AGGFGITPKIAEELFK---AGVDV-ITMGNHIWDKKEIFDFIDKE---P----RILRPANYPPGTP 93 (253)
T ss_dssp -G-SEEEEE-TTT-TTTSS--HHHHHHHHH---HT-SE-EE--TTTTSSTTHHHHHHH----S----SEE--TTS-TT-S
T ss_pred cCCCEEEECCccc-CCCCCCCHHHHHHHHh---cCCCE-EecCcccccCcHHHHHHhcC---C----CcEECCCCCCCCC
Confidence 4799999999999 6554222222222221 13444 47899998743321111000 0 0011124555556
Q ss_pred CceEEEEEeCCEEEEEEeCC--CCCCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHH
Q 007211 405 AKFWYSTDYGMFRFCVADTE--HDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRES 482 (612)
Q Consensus 405 ~~~~Ysfd~G~v~fi~Ldt~--~~~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~ 482 (612)
+.-|..++.++..+.++|-. ..+.+...=+.-+++.|++. +.+.+.+||=+|.=- + . .+.
T Consensus 94 G~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEa--T-----------S----EK~ 155 (253)
T PF13277_consen 94 GRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEA--T-----------S----EKQ 155 (253)
T ss_dssp SBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S---H-----------H----HHH
T ss_pred cCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCc--H-----------H----HHH
Confidence 78899999999888777743 22222223345556666654 357788888899431 0 0 223
Q ss_pred HHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEE-eCCCCCC
Q 007211 483 LQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVV-AGGGGAG 540 (612)
Q Consensus 483 l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv-~G~gG~~ 540 (612)
-.-.+.+-+|.+|+-=|+|.-. .+.++ -++||-||+ +|+-|..
T Consensus 156 A~g~~lDGrvsaV~GTHTHVqT-----aDerI----------Lp~GTaYiTDvGMtG~~ 199 (253)
T PF13277_consen 156 AMGWYLDGRVSAVVGTHTHVQT-----ADERI----------LPGGTAYITDVGMTGPY 199 (253)
T ss_dssp HHHHHHBTTBSEEEEESSSS-B-----S--EE-----------TTS-EEES---EBEES
T ss_pred HHHHHhCCcEEEEEeCCCCccC-----chhhc----------cCCCCEEEecCccccCc
Confidence 3445667899999999999832 11111 146888886 7777753
No 100
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.27 E-value=0.0098 Score=60.82 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=41.7
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007211 290 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.++||.|.+ ...+++++++. ++.|.++++||++. .|..+ .+.++.+..+. ..+..+.
T Consensus 2 yvIGDIHG~---------------~~~L~~LL~~i~~~~~~D~Li~lGDlVd-RGp~s--~evl~~l~~l~--~~v~~Vl 61 (257)
T cd07422 2 YAIGDIQGC---------------YDELQRLLEKINFDPAKDRLWLVGDLVN-RGPDS--LETLRFVKSLG--DSAKTVL 61 (257)
T ss_pred EEEECCCCC---------------HHHHHHHHHhcCCCCCCCEEEEecCcCC-CCcCH--HHHHHHHHhcC--CCeEEEc
Confidence 689999854 34566666653 35799999999995 44433 23333433332 3678999
Q ss_pred CCCccC
Q 007211 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999974
No 101
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.18 E-value=0.15 Score=52.13 Aligned_cols=138 Identities=11% Similarity=0.125 Sum_probs=74.4
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHH-h---------cCCccEEEEeCcccccCCc----------------
Q 007211 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ-D---------LKNIDIVFHIGDICYANGY---------------- 342 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~-~---------~~~pDfvl~~GDi~Y~~g~---------------- 342 (612)
+++++|.+.+... . ....++.+...+. + ..++.-+|++||.+...+.
T Consensus 2 i~~vSgL~ig~~~----~---~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~ 74 (257)
T cd07387 2 IALVSGLGLGGNA----E---SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSS 74 (257)
T ss_pred EEEEcccccCCCc----c---chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccc
Confidence 6889999987541 1 1112333333332 1 1345679999999965431
Q ss_pred ---hhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccc---eeeecCCCCCCceEEEEEeCCE
Q 007211 343 ---ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAE---TMFYVPAENRAKFWYSTDYGMF 416 (612)
Q Consensus 343 ---~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~---~~f~~P~~~~~~~~Ysfd~G~v 416 (612)
..+.+++-+.+..+.+.+|+.+.|||||-....- ....-.+|-.|-. ..+.. -.|. |.|+++++
T Consensus 75 ~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~l-----PQqplh~~lfp~s~~~~~~~~----vtNP-~~~~i~g~ 144 (257)
T cd07387 75 AASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSL-----PQQPLHRCLFPKSSNYSTLNL----VTNP-YEFSIDGV 144 (257)
T ss_pred hhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccC-----CCCCCCHHHhhcccccCCcEE----eCCC-eEEEECCE
Confidence 2234445555666778999999999999642100 0000000000000 00111 1122 56999999
Q ss_pred EEEEEeCCCC-----CCCCHHHHHHHHHHHhh
Q 007211 417 RFCVADTEHD-----WREGTEQYKFIEHCLAS 443 (612)
Q Consensus 417 ~fi~Ldt~~~-----~~~~~~Q~~WL~~~La~ 443 (612)
+|++.+...- +.....-.+.|+..|+-
T Consensus 145 ~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 145 RVLGTSGQNVDDILKYSSLESRLDILERTLKW 176 (257)
T ss_pred EEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh
Confidence 9998876531 23334446777777763
No 102
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=96.17 E-value=0.015 Score=60.06 Aligned_cols=70 Identities=19% Similarity=0.256 Sum_probs=39.4
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--------CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcC
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--------KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--------~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~ 359 (612)
+++++||.|.. ...++++++.. ...+.+|++||+++......+--.++..+......
T Consensus 3 ~iyaIGDIHG~---------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~ 67 (304)
T cd07421 3 VVICVGDIHGY---------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPK 67 (304)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccc
Confidence 68999999854 23344443321 13568999999995443322222222222221112
Q ss_pred CCeEEcCCCCccC
Q 007211 360 VPYMIASGNHERD 372 (612)
Q Consensus 360 vP~~~v~GNHD~~ 372 (612)
..++++.||||..
T Consensus 68 ~~vv~LrGNHE~~ 80 (304)
T cd07421 68 QRHVFLCGNHDFA 80 (304)
T ss_pred cceEEEecCChHH
Confidence 2478899999953
No 103
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=96.04 E-value=0.02 Score=46.98 Aligned_cols=74 Identities=18% Similarity=0.203 Sum_probs=42.5
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCC--CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007211 168 APVYPRLAQGKTWNEMTVTWTSGYG--INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~--~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
+|..+++... ..+++.|+|..... .....-.|+|....+... ....+. ++-.+.+++
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i 60 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSD---WQEVTV-----------------PGNETSYTI 60 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSSSESEEEEEEEETTSSSE---EEEEEE-----------------ETTSSEEEE
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCCCeeEEEEEEEeccccee---eeeeee-----------------eeeeeeeee
Confidence 3545554433 47899999998741 111234555554333220 000111 112336789
Q ss_pred cCCCCCCEEEEEEeeec
Q 007211 246 KELWPNAMYTYKVGHRL 262 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~ 262 (612)
+||+|++.|.++|....
T Consensus 61 ~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 61 TGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp ESCCTTSEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEEe
Confidence 99999999999998753
No 104
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=95.98 E-value=0.13 Score=60.61 Aligned_cols=54 Identities=17% Similarity=0.193 Sum_probs=29.3
Q ss_pred CeEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CCc-cEEEEeCcccccC
Q 007211 286 LQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KNI-DIVFHIGDICYAN 340 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~i~~~~--~~p-Dfvl~~GDi~Y~~ 340 (612)
.++|+...|+|..-... ..|.. -....+..+..++++. +++ -++|..||++...
T Consensus 39 ~L~IL~TnDiHg~l~~~-dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGs 97 (780)
T PRK09418 39 NLRILETSDIHVNLMNY-DYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGT 97 (780)
T ss_pred EEEEEEEeecCCCCcCc-CccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCc
Confidence 58999999999764311 00110 0011233344444432 223 4889999999543
No 105
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=95.90 E-value=0.019 Score=57.09 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=40.6
Q ss_pred EEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhc-CCCeEEcC
Q 007211 290 VIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYMIAS 366 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s-~vP~~~v~ 366 (612)
.++||+|.. ...+.++++.. ...|.++++||++.. |... .+.+..+..+.. ..+++.+.
T Consensus 1 ~~igDiHg~---------------~~~l~~~l~~~~~~~~d~li~lGD~vdr-g~~~--~~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC---------------LDDLLRLLEKIGFPPNDKLIFLGDYVDR-GPDS--VEVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC---------------HHHHHHHHHHhCCCCCCEEEEECCEeCC-CCCc--HHHHHHHHHhcCCCCcEEEEc
Confidence 378999843 23455666543 368999999999954 3322 122222222211 45789999
Q ss_pred CCCccC
Q 007211 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 63 GNHe~~ 68 (225)
T cd00144 63 GNHEDM 68 (225)
T ss_pred cCchhh
Confidence 999974
No 106
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=95.79 E-value=0.18 Score=50.91 Aligned_cols=61 Identities=21% Similarity=0.254 Sum_probs=38.0
Q ss_pred HHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007211 435 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 435 ~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
+-+++.+++++ ++...+|+..|-...|.. ..... ...+...+.+.++|+|+.||.|..+-.
T Consensus 162 ~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~---------~p~~~-~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 162 ERIAADIAEAK-KKADIVIVSLHWGVEYSY---------YPTPE-QRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred HHHHHHHHHHh-hcCCEEEEEecCcccCCC---------CCCHH-HHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 44556666553 347889999996542211 01111 335555556679999999999987643
No 107
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=95.77 E-value=0.25 Score=58.98 Aligned_cols=136 Identities=13% Similarity=0.115 Sum_probs=77.2
Q ss_pred cceEEEEEEeeccc--ceEEEEEeCCCCCcEEEEeeccccc----cCCCCCcc-eeeecCCCCCcEEEEEEeCCCCCCCc
Q 007211 125 GKGSLKLMLINQRS--DFSVALFSGGLLKPKLVAVSNKIAF----TNPNAPVY-PRLAQGKTWNEMTVTWTSGYGINEAE 197 (612)
Q Consensus 125 g~~~~~~~l~n~r~--~~~f~~f~~~~~~~~~~a~s~~~~~----~~~~~p~~-~~La~~~~~~~m~V~W~t~~~~~~~~ 197 (612)
-......+|-+++. +|+|++-.-+..-+-. .|..|++ .-|.+|-+ +.|.... .++++|.|......+...
T Consensus 570 ~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~--sS~~i~V~Tlsd~PsaPP~Nl~lev~s-StsVrVsW~pP~~~t~ng 646 (1381)
T KOG4221|consen 570 ENNATEYTINGLEKYTEYSIRVVAYNSAGSGV--SSADITVRTLSDVPSAPPQNLSLEVVS-STSVRVSWLPPPSETQNG 646 (1381)
T ss_pred ecCccEEEeecCCCccceEEEEEEecCCCCCC--CCCceEEEeccCCCCCCCcceEEEecC-CCeEEEEccCCCcccccc
Confidence 35566677778886 6887776522111100 1222222 24566666 7775544 799999999875433333
Q ss_pred cEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007211 198 AFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 198 ~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 277 (612)
...-|...............++. .|....-.+.+|+|+|.|.+||.....+|.+..|++..|.|
T Consensus 647 ~itgYkIRy~~~~~~~~~~~t~v----------------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT 710 (1381)
T KOG4221|consen 647 QITGYKIRYRKLSREDEVNETVV----------------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAET 710 (1381)
T ss_pred eEEEEEEEecccCcccccceeec----------------ccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccC
Confidence 34444332111100001111111 11111224678999999999998877778877899999998
Q ss_pred CC
Q 007211 278 SP 279 (612)
Q Consensus 278 ~p 279 (612)
+-
T Consensus 711 ~~ 712 (1381)
T KOG4221|consen 711 PE 712 (1381)
T ss_pred cc
Confidence 63
No 108
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=95.74 E-value=0.32 Score=48.67 Aligned_cols=198 Identities=19% Similarity=0.148 Sum_probs=108.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.|++++||+=... |. ....+.+.++.++ -++||+|..|-++ +.|.---|+.|.+.++. .+-+ ++.
T Consensus 1 mriLfiGDvvGk~--Gr-------~~v~~~Lp~lk~k-yk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~dv-iT~ 65 (266)
T COG1692 1 MRILFIGDVVGKP--GR-------KAVKEHLPQLKSK-YKIDFVIVNGENA-AGGFGITEKIYKELLEA---GADV-ITL 65 (266)
T ss_pred CeEEEEecccCcc--hH-------HHHHHHhHHHHHh-hcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCCE-Eec
Confidence 4899999984221 10 0011233344333 5799999999999 67765556666666543 3333 588
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCC--CCCCC-CHHHHHHHHHHHhh
Q 007211 367 GNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTE--HDWRE-GTEQYKFIEHCLAS 443 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~--~~~~~-~~~Q~~WL~~~La~ 443 (612)
|||=++-++.-.+-...+ . .-.-.+.|....+.-|.-|...+..+.+.+-. ..... -..-++=+++.|..
T Consensus 66 GNH~wd~~ei~~~i~~~~---~----ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~ 138 (266)
T COG1692 66 GNHTWDQKEILDFIDNAD---R----ILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDE 138 (266)
T ss_pred ccccccchHHHHHhhccc---c----eeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHh
Confidence 999986433211111000 0 00112344444566677788877666665532 11111 12223445666665
Q ss_pred ccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCcccc
Q 007211 444 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYK 523 (612)
Q Consensus 444 ~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~ 523 (612)
.+ .+++.+||-+|.-- +| | +.-.-++-+..|.+|+-=|+|.-.--+ ++
T Consensus 139 ~~-~~~~~iiVDFHAEt--TS-----------E----K~a~g~yldGrvsavvGTHTHV~TaD~-----rI--------- 186 (266)
T COG1692 139 IK-LGTDLIIVDFHAET--TS-----------E----KNAFGWYLDGRVSAVVGTHTHVPTADE-----RI--------- 186 (266)
T ss_pred Cc-cCCceEEEEccccc--hh-----------h----hhhhheEEcCeEEEEEeccCccccccc-----ee---------
Confidence 43 45677888899542 11 1 011122335679999999999843222 22
Q ss_pred CCCCceEEEE-eCCCCC
Q 007211 524 GTLNGTIHVV-AGGGGA 539 (612)
Q Consensus 524 ~~~~g~vyiv-~G~gG~ 539 (612)
-++|+-|+. +|+-|.
T Consensus 187 -L~~GTayiTDvGMtG~ 202 (266)
T COG1692 187 -LPKGTAYITDVGMTGP 202 (266)
T ss_pred -cCCCcEEEecCccccc
Confidence 136888886 677775
No 109
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=95.66 E-value=0.13 Score=59.53 Aligned_cols=85 Identities=20% Similarity=0.261 Sum_probs=41.4
Q ss_pred eEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHH-------Hhhh
Q 007211 287 QRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFT-------AQIE 354 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~-------~~i~ 354 (612)
++|+...|+|..-... ..|.. -....+..+..++++. ..--+++..||++..... ..|.... ..+-
T Consensus 3 l~Il~TnDlH~~l~~~-dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~-~~~~~~~~~~~~~~~p~~ 80 (626)
T TIGR01390 3 LRIVETTDLHTNLMDY-DYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPL-GDYMAAQGLKAGQMHPVY 80 (626)
T ss_pred EEEEEEcCCccCccCC-cccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccc-hhhhhhccccCCCcChHH
Confidence 7999999999764311 00000 0111223334444332 123588999999964332 1111110 0111
Q ss_pred hhhcCCCe-EEcCCCCccCC
Q 007211 355 PIASTVPY-MIASGNHERDW 373 (612)
Q Consensus 355 ~l~s~vP~-~~v~GNHD~~~ 373 (612)
.++..+.| ..++||||+++
T Consensus 81 ~~mN~lgyDa~tlGNHEFd~ 100 (626)
T TIGR01390 81 KAMNLLKYDVGNLGNHEFNY 100 (626)
T ss_pred HHHhhcCccEEecccccccc
Confidence 12233333 35899999975
No 110
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=95.60 E-value=0.066 Score=55.93 Aligned_cols=181 Identities=20% Similarity=0.299 Sum_probs=95.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh-cCCccEEEEeCcccccCCc--------hhHH---HHHHHhhh
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGY--------ISQW---DQFTAQIE 354 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~pDfvl~~GDi~Y~~g~--------~~~w---d~f~~~i~ 354 (612)
.|++|-|++|..-. ....++..+-+. ..++|++|..||+---+.. ...+ ..|++...
T Consensus 1 MrIaVqGCcHG~Ld-----------~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGELD-----------NIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhHH-----------HHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhC
Confidence 47899999974310 112233333221 1479999999998632211 1122 23444432
Q ss_pred -hhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEE-----EEEeCCEEEEEEeCC---C
Q 007211 355 -PIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWY-----STDYGMFRFCVADTE---H 425 (612)
Q Consensus 355 -~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Y-----sfd~G~v~fi~Ldt~---~ 425 (612)
.+.+.+|.+++=||||... +......||=. ..+.|| ...+|++|+-+|+.- +
T Consensus 70 ge~~APVlTIFIGGNHEAsn-----yL~eLpyGGwV--------------ApNIyYlG~agVv~~~gvRIggiSGI~k~~ 130 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEASN-----YLQELPYGGWV--------------APNIYYLGYAGVVNFGGVRIGGISGIYKEH 130 (456)
T ss_pred CcccCceeEEEecCchHHHH-----HHHhcccCcee--------------ccceEEeeecceEEECCEEEeeccchhhhh
Confidence 3456789999999999641 11111111110 123333 467899999888752 3
Q ss_pred CCCCC---------H------HHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCC------C-C-----Cchh
Q 007211 426 DWREG---------T------EQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDG------S-F-----AEPM 478 (612)
Q Consensus 426 ~~~~~---------~------~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~------~-~-----~~~~ 478 (612)
+|..+ + .-.+.=...|.+. +.|-=|++.|-=+ -.-. .+++.. . + ...+
T Consensus 131 dy~kgh~E~ppyn~stiRsiYHvR~~dV~~Lkql---k~piDIfLSHDWP-~GI~-~yGd~~~LLr~KPFFrqeie~~~L 205 (456)
T KOG2863|consen 131 DYRKGHFEWPPYNNSTIRSIYHVRISDVAKLKQL---KHPIDIFLSHDWP-RGIY-YYGDKKQLLRLKPFFRQEIEEGKL 205 (456)
T ss_pred hcccCCCCCCCccchhhhhhhhhhhhhhHHHHhh---cCcceEEeecCCC-cchh-hcCCHHHHHhcCcHHHHHHhcCCc
Confidence 33221 0 0001111233332 4565688888633 1111 111100 0 0 0123
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007211 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
|...+++||++-+...+|+.|.|.
T Consensus 206 GSp~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 206 GSPALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred CChHHHHHHHHhCcchhhhhhHhh
Confidence 456889999999999999999997
No 111
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=95.45 E-value=0.034 Score=57.28 Aligned_cols=65 Identities=14% Similarity=0.251 Sum_probs=41.1
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
++.++||.|.. ...++++++++ ...|-++++||++..+.... +-++.+..+. -.+..
T Consensus 2 ~~YvIGDIHGc---------------~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~sl---evL~~l~~l~--~~~~~ 61 (279)
T TIGR00668 2 ATYLIGDLHGC---------------YDELQALLERVEFDPGQDTLWLTGDLVARGPGSL---EVLRYVKSLG--DAVRL 61 (279)
T ss_pred cEEEEEcccCC---------------HHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHH---HHHHHHHhcC--CCeEE
Confidence 46899999864 34566666654 25789999999995443221 2233333221 13568
Q ss_pred cCCCCccC
Q 007211 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||..
T Consensus 62 VlGNHD~~ 69 (279)
T TIGR00668 62 VLGNHDLH 69 (279)
T ss_pred EEChhHHH
Confidence 99999963
No 112
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=95.44 E-value=0.23 Score=57.59 Aligned_cols=87 Identities=20% Similarity=0.243 Sum_probs=42.5
Q ss_pred CCeEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHhc--CC-ccEEEEeCcccccCCchhHHHHHHH-------h
Q 007211 285 SLQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQDL--KN-IDIVFHIGDICYANGYISQWDQFTA-------Q 352 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~i~~~~--~~-pDfvl~~GDi~Y~~g~~~~wd~f~~-------~ 352 (612)
..++|+...|+|..-... ..|.. -....+..+..++++. +. --+++..||++..... ..|..+.. .
T Consensus 24 ~~L~IL~TnDlHg~l~~~-dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~-~~~~~~~~~~~g~~~p 101 (649)
T PRK09420 24 VDLRIMETTDLHSNMMDF-DYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPL-GDYMAAKGLKAGDVHP 101 (649)
T ss_pred ceEEEEEEcccccCccCC-ccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchh-hhhhhhccccCCCcch
Confidence 359999999999764311 00000 0011223334444432 22 2488899999954322 21211100 1
Q ss_pred hhhhhcCCCe-EEcCCCCccCC
Q 007211 353 IEPIASTVPY-MIASGNHERDW 373 (612)
Q Consensus 353 i~~l~s~vP~-~~v~GNHD~~~ 373 (612)
+-.++..+.| ..++||||+++
T Consensus 102 ~i~amN~lgyDa~tlGNHEFd~ 123 (649)
T PRK09420 102 VYKAMNTLDYDVGNLGNHEFNY 123 (649)
T ss_pred HHHHHHhcCCcEEeccchhhhc
Confidence 1112223333 45899999975
No 113
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=95.21 E-value=0.31 Score=49.17 Aligned_cols=59 Identities=19% Similarity=0.128 Sum_probs=36.3
Q ss_pred HHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007211 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 437 L~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
+++.+++++ .+...+|++.|--..|.. ..... ...+..-+.+.++|+++.||.|..+..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~---------~p~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQY---------EPTDE-QRELAHALIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCC---------CCCHH-HHHHHHHHHHcCCCEEEcCCCCcCCce
Confidence 445555543 357889999996542211 00111 234555555578999999999987744
No 114
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.75 E-value=0.089 Score=52.67 Aligned_cols=83 Identities=17% Similarity=0.282 Sum_probs=49.8
Q ss_pred eEEEEEeecCCCCCC-----CCCcccccccc-hHHHHHHHHHhcCCccEEEEeCcccccCCc--hhHHHHHHHhhhhhhc
Q 007211 287 QRVVIFGDMGKDEAD-----GSNEYNDFQYA-SLNTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAS 358 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~-----~~~~~~~~~~~-~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~s 358 (612)
-+.++++|.|.+-.. |. ..-.+|.. ....+.++++. .+|+-++++||+-.+-+. ..+|+.....++.+..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi-~lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~ 97 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGI-NLPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDE 97 (235)
T ss_pred CcEEEEEecccchhHHHHhcCc-ccCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCccccccHHHHHHHHHHhcc
Confidence 368999999986431 10 00112222 12344555554 689999999999977554 3445433333333222
Q ss_pred CCCeEEcCCCCccC
Q 007211 359 TVPYMIASGNHERD 372 (612)
Q Consensus 359 ~vP~~~v~GNHD~~ 372 (612)
+ -++.+.||||-.
T Consensus 98 ~-evi~i~GNHD~~ 110 (235)
T COG1407 98 R-EVIIIRGNHDNG 110 (235)
T ss_pred C-cEEEEeccCCCc
Confidence 2 599999999975
No 115
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=94.60 E-value=0.088 Score=55.54 Aligned_cols=67 Identities=19% Similarity=0.165 Sum_probs=40.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC---ccEEEEeCcccccCCchhHHHHHHHhhhhhhcC--CCe
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPIAST--VPY 362 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~--vP~ 362 (612)
+++++||+|.. ...+.++++...- -+-.+++||+++ +|..+. +-+..+-.+.-. --+
T Consensus 52 ~~~vvGDiHG~---------------~~dL~~il~~~g~~~~~~~~lFLGDyVD-RG~~s~--Evl~ll~~lk~~~p~~v 113 (321)
T cd07420 52 QVTICGDLHGK---------------LDDLFLIFYKNGLPSPENPYVFNGDFVD-RGKRSI--EILIILFAFFLVYPNEV 113 (321)
T ss_pred CeEEEEeCCCC---------------HHHHHHHHHHcCCCCccceEEEeccccC-CCCCcH--HHHHHHHHHhhcCCCcE
Confidence 58999999854 3456667765322 267999999995 443221 122222111112 237
Q ss_pred EEcCCCCccC
Q 007211 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
+.+.||||..
T Consensus 114 ~llRGNHE~~ 123 (321)
T cd07420 114 HLNRGNHEDH 123 (321)
T ss_pred EEecCchhhh
Confidence 8899999975
No 116
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=94.20 E-value=0.59 Score=53.93 Aligned_cols=40 Identities=23% Similarity=0.357 Sum_probs=34.4
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007211 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
.+++++||+|||.|.+||......|-+..|....|.|.+.
T Consensus 498 ~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 498 TTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 5688999999999999999876666667799999999875
No 117
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=93.56 E-value=0.2 Score=52.66 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=40.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC--CccEEEEeCcccccCCchhHHHHHHHhhhhhhcCC--CeE
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--PYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~v--P~~ 363 (612)
+++++||+|.. ...+.++++... ..+-++++||+++ .|..+ -+-+..+..+.-.. -++
T Consensus 44 ~i~ViGDIHG~---------------~~dL~~l~~~~g~~~~~~ylFLGDyVD-RG~~s--~Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHGQ---------------FYDLLKLFEVGGSPANTRYLFLGDYVD-RGYFS--IECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEECCccC-CCCCh--HHHHHHHHHHHhhcCCCEE
Confidence 58999999854 234555655433 3488999999994 44322 12222222222223 478
Q ss_pred EcCCCCccC
Q 007211 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 899999974
No 118
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=93.18 E-value=1.3 Score=46.80 Aligned_cols=25 Identities=20% Similarity=0.262 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHhcCCeEEEecCccc
Q 007211 478 MGRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 478 ~~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
.+.+.+...+++++.++++=||.-.
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCccc
Confidence 3578999999999999999999854
No 119
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=93.12 E-value=0.78 Score=36.81 Aligned_cols=38 Identities=16% Similarity=0.026 Sum_probs=25.5
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEE
Q 007211 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFK 276 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~ 276 (612)
-...+.+.+|.|++.|.++|.....++...|+....|+
T Consensus 55 ~~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~~ 92 (93)
T cd00063 55 SETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTVT 92 (93)
T ss_pred cccEEEEccccCCCEEEEEEEEECCCccCCCccccccc
Confidence 34667789999999999999865433333444434443
No 120
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=92.80 E-value=0.26 Score=53.01 Aligned_cols=67 Identities=21% Similarity=0.241 Sum_probs=40.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC--Cc-cEEEEeCcccccCCchhHHHHHHHhhhhhhc--CCCe
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK--NI-DIVFHIGDICYANGYISQWDQFTAQIEPIAS--TVPY 362 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~p-Dfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s--~vP~ 362 (612)
++.++||+|.. ...+.++++... .. +.++++||+++ .|..+. +-+..+..+.- .--+
T Consensus 67 ~i~VvGDIHG~---------------~~dL~~ll~~~g~~~~~~~ylFLGDyVD-RGp~Sl--Evl~lL~~lki~~p~~v 128 (377)
T cd07418 67 EVVVVGDVHGQ---------------LHDVLFLLEDAGFPDQNRFYVFNGDYVD-RGAWGL--ETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CEEEEEecCCC---------------HHHHHHHHHHhCCCCCCceEEEeccccC-CCCChH--HHHHHHHHHhhccCCeE
Confidence 58999999854 345666666532 22 35899999994 453221 22222222211 2347
Q ss_pred EEcCCCCccC
Q 007211 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
+.+.||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8899999975
No 121
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=92.26 E-value=0.47 Score=49.00 Aligned_cols=67 Identities=18% Similarity=0.202 Sum_probs=40.8
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhh--hcCCCeE
Q 007211 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~s~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++. .|.... +-+..+..+ ...--++
T Consensus 29 ~i~vvGDiHG~---------------~~~l~~ll~~~~~~~~~~~vfLGD~VD-rG~~s~--e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHGQ---------------FDDLLRLFDLNGPPPDTNYVFLGDYVD-RGPFSI--EVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcCC---------------HHHHHHHHHHcCCCCCceEEEeCCccC-CCCChH--HHHHHHHHHHhcCCCCEE
Confidence 58999999854 33455555542 34678999999994 443221 222222111 1123578
Q ss_pred EcCCCCccC
Q 007211 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 899999985
No 122
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.19 E-value=1.5 Score=40.53 Aligned_cols=86 Identities=26% Similarity=0.304 Sum_probs=53.3
Q ss_pred HHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCce
Q 007211 480 RESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDY 559 (612)
Q Consensus 480 r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~ 559 (612)
.+.|.-|-++.+||+.++||+|.++... -+|-.||--|++-.... . +.......
T Consensus 96 ~~sL~~LaRqldvDILl~G~Th~f~Aye------------------~eg~ffvnPGSaTGAfn-~-------~~t~~~~P 149 (183)
T KOG3325|consen 96 PESLALLARQLDVDILLTGHTHKFEAYE------------------HEGKFFVNPGSATGAFN-V-------SDTDIIVP 149 (183)
T ss_pred HHHHHHHHHhcCCcEEEeCCceeEEEEE------------------eCCcEEeCCCcccCCCc-c-------cccCCCCC
Confidence 3466777778999999999999988763 24667777776532211 1 11111456
Q ss_pred eEEEEEEecCCeEEEEEEECCCCcE-EEEEEEEe
Q 007211 560 GFVKLTAFDHSNLLFEYKKSSDGKV-YDSFRISR 592 (612)
Q Consensus 560 Gy~~l~v~n~~~l~~~~~~~~dG~v-~D~f~i~k 592 (612)
.|+.+++ .++.+..-.++--||+| +|..+..|
T Consensus 150 SFvLmDi-qg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 150 SFVLMDI-QGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred ceEEEEe-cCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 7899998 55555443344567775 45554443
No 123
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=91.94 E-value=0.42 Score=49.73 Aligned_cols=24 Identities=8% Similarity=0.199 Sum_probs=21.4
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007211 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.++..+++++.++++=||.-.
T Consensus 213 g~~~~~~Fl~~n~l~~iiR~He~~ 236 (285)
T cd07415 213 GQDVVEEFNHNNGLTLICRAHQLV 236 (285)
T ss_pred CHHHHHHHHHHCCCeEEEEcCccc
Confidence 578999999999999999999844
No 124
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=91.64 E-value=0.29 Score=53.94 Aligned_cols=54 Identities=15% Similarity=0.165 Sum_probs=37.1
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCC
Q 007211 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANG 341 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g 341 (612)
..+||++..|.|.+-..... .....+..++.+|+.- .+++|||+..||+...+.
T Consensus 12 ntirILVaTD~HlGY~EkD~---vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDA---VRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred cceEEEEeecCccccccCCc---ccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 45999999999986432111 1123456677766542 368999999999997763
No 125
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=91.57 E-value=0.53 Score=49.63 Aligned_cols=23 Identities=13% Similarity=0.436 Sum_probs=20.6
Q ss_pred hhHHHHHHHHHhcCCeEEEecCc
Q 007211 478 MGRESLQKLWQKYKVDIAIYGHV 500 (612)
Q Consensus 478 ~~r~~l~~l~~k~~VdlvlsGH~ 500 (612)
.+.+++...++++++++++=||.
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEech
Confidence 34789999999999999999997
No 126
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=91.33 E-value=0.52 Score=49.25 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=21.3
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007211 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.++..+++++.++++=||.-.
T Consensus 221 g~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 221 GKDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred CHHHHHHHHHHcCCeEEEECCccc
Confidence 578999999999999999999844
No 127
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=91.16 E-value=0.73 Score=50.51 Aligned_cols=82 Identities=16% Similarity=0.296 Sum_probs=51.3
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh---cCCccEEEEeCcccccCC-c------------hhHHHH
Q 007211 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD---LKNIDIVFHIGDICYANG-Y------------ISQWDQ 348 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~pDfvl~~GDi~Y~~g-~------------~~~wd~ 348 (612)
..+++++++|.|.+.. ++.. ......++++.-. +.+...++.+||++..-| + ..|+++
T Consensus 224 e~v~v~~isDih~GSk----~F~~--~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~ 297 (481)
T COG1311 224 ERVYVALISDIHRGSK----EFLE--DEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEE 297 (481)
T ss_pred cceEEEEEeeeecccH----HHHH--HHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHH
Confidence 4588999999998642 2210 1111222222211 134579999999996432 1 235666
Q ss_pred HHHhhhhhhcCCCeEEcCCCCccC
Q 007211 349 FTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 349 f~~~i~~l~s~vP~~~v~GNHD~~ 372 (612)
+-+.+..+-..+-+++.|||||..
T Consensus 298 ~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 298 LAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHhhCCCCceEEEecCCCCcc
Confidence 666666666678899999999975
No 128
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=90.98 E-value=13 Score=44.98 Aligned_cols=191 Identities=15% Similarity=0.092 Sum_probs=104.0
Q ss_pred ccceecccCccccEEEEEEeCC-----CCCCCCEEEEEeCCCCCCCCcCCCCCCCCCCCccCCCceeEEeccCCCCcccc
Q 007211 50 SPAVVGLKGQNSEWVTVEYSSP-----NPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGT 124 (612)
Q Consensus 50 ~~~~~~~~~~~~~~v~~~~~~~-----~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 124 (612)
.|.=|.-.|.....++|+|... +-..-.++=.|.|..... .+..--+....==+|.|.+.+-..|
T Consensus 719 ~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~-------~W~~~~v~~~d~~~~V~~~~st~~~--- 788 (1051)
T KOG3513|consen 719 NPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADK-------EWKEVIVSNQDQPRYVVSNESTEPF--- 788 (1051)
T ss_pred CCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCc-------ccceeEecccCCceEEEcCCCCCCc---
Confidence 4444444455668899999984 344556777788875541 1110001001113566776543233
Q ss_pred cceEEEEEEeecccceEEEEEeCCCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCC--CCCCccEEEE
Q 007211 125 GKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYG--INEAEAFVQW 202 (612)
Q Consensus 125 g~~~~~~~l~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~--~~~~~~~V~y 202 (612)
=.-.++++.+|.+-+=. ..++.+.-|+.= .-+.+|..+.+ ..-+.++|.|.|....- .....-.|+|
T Consensus 789 tpyevKVqa~N~~GeGp--------~s~~~v~~S~Ed--~P~~ap~~~~~-~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y 857 (1051)
T KOG3513|consen 789 TPYEVKVQAINDQGEGP--------ESQVTVGYSGED--EPPVAPTKLSA-KPLSSSEVNLSWKPPLWDNGKLTGYEVKY 857 (1051)
T ss_pred ceeEEEEEEecCCCCCC--------CCceEEEEcCCC--CCCCCCcccee-ecccCceEEEEecCcCccCCccceeEEEE
Confidence 34578888888875322 223444445432 12445655553 44557999999954321 2234567888
Q ss_pred eecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007211 203 GRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 203 g~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
....+... ...... -.+-.-.+.|+||+|+|.|.+.|..-..-|.+.-|...+-+|.+.
T Consensus 858 ~~~~~~~~--~~~~~~-----------------i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~ 916 (1051)
T KOG3513|consen 858 WKINEKEG--SLSRVQ-----------------IAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKA 916 (1051)
T ss_pred EEcCCCcc--ccccee-----------------ecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCC
Confidence 76544321 011110 113445678999999999999998654334333344444445443
No 129
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=90.71 E-value=0.69 Score=48.84 Aligned_cols=24 Identities=13% Similarity=0.313 Sum_probs=21.3
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007211 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.+...+++++.++++=||.-.
T Consensus 232 g~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 232 GPDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred CHHHHHHHHHHcCCcEEEECCccc
Confidence 578899999999999999999843
No 130
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=90.49 E-value=0.76 Score=48.22 Aligned_cols=24 Identities=8% Similarity=0.126 Sum_probs=21.3
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007211 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.++..+++++.++++=||.-.
T Consensus 214 g~~~~~~Fl~~n~l~~iiR~He~~ 237 (303)
T PTZ00239 214 GAKVTKEFCRLNDLTLICRAHQLV 237 (303)
T ss_pred CHHHHHHHHHHCCCcEEEEcChhh
Confidence 478999999999999999999844
No 131
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=89.85 E-value=0.73 Score=48.16 Aligned_cols=24 Identities=13% Similarity=0.300 Sum_probs=21.2
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007211 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.++..+++++.++++=||.-.
T Consensus 223 g~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 223 GEDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred CHHHHHHHHHHcCCcEEEEcCccc
Confidence 578899999999999999999843
No 132
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].
Probab=88.04 E-value=4 Score=45.82 Aligned_cols=93 Identities=19% Similarity=0.338 Sum_probs=61.2
Q ss_pred EEEEEeC---CCCCCCCEEEEEeCCCCCCCCcCCCCCCCCCCCccCCCceeEEeccCCCCcccccc---eEEEEE---Ee
Q 007211 64 VTVEYSS---PNPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYSSPQYKGTGK---GSLKLM---LI 134 (612)
Q Consensus 64 v~~~~~~---~~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~---~~~~~~---l~ 134 (612)
|+..|+- ..|+..||||||=-.-.+. .-...|.|+... .+| ..|+ ..+.|. |.
T Consensus 22 v~C~Ytlt~~~~ps~~DWIGiFKVGw~s~----------------rdY~Tf~Wa~~p-~~~-~~~s~~~~~V~F~ayyLP 83 (546)
T PF07888_consen 22 VECHYTLTPGFHPSSKDWIGIFKVGWSST----------------RDYYTFVWAPVP-ENY-VEGSAVNCQVQFQAYYLP 83 (546)
T ss_pred eEEEEecCCCCCCCCCCeeEEeecCCCch----------------hheeeEEeeccC-ccc-cCCCccceEEEECcccCC
Confidence 7777775 2899999999996543222 345788888642 244 4443 478886 44
Q ss_pred ec-ccceEEEEEeCCCCCcEEEEeeccccccCCCCCcceeeecCC
Q 007211 135 NQ-RSDFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGK 178 (612)
Q Consensus 135 n~-r~~~~f~~f~~~~~~~~~~a~s~~~~~~~~~~p~~~~La~~~ 178 (612)
+. =..|.|+|... .-.++++|.|..|..|+ |.-.-+++..
T Consensus 84 k~~~e~YqfcYv~~---~g~V~G~S~pFqf~~~~-p~eeLvtle~ 124 (546)
T PF07888_consen 84 KDDDEFYQFCYVDQ---KGEVRGASTPFQFRAPK-PLEELVTLED 124 (546)
T ss_pred CCCCCeEEEEEECC---CccEEEecCCcccCCCC-ccccceeecc
Confidence 43 23588888763 34688999999998765 5555455544
No 133
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=86.27 E-value=3.4 Score=46.45 Aligned_cols=56 Identities=18% Similarity=0.211 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeE-EEecCccc
Q 007211 431 TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDI-AIYGHVHN 502 (612)
Q Consensus 431 ~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~Vdl-vlsGH~H~ 502 (612)
-.|.+|-.+.++. .+..-+|+++|.|. ..+ . +. .-.+.++...+ ++++ ||-||.|.
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~--~~~------~---e~--~~~~~~ir~~~p~t~IqviGGHshi 268 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPV--RDD------D---EW--KSLHAEIRKVHPNTPIQVIGGHSHI 268 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEeccccc--ccc------h---hh--hhHHHHHhhhCCCCceEEECchhhh
Confidence 4577887777765 46666899999996 211 0 11 11333344444 6788 99999998
No 134
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=86.14 E-value=2 Score=43.55 Aligned_cols=64 Identities=19% Similarity=0.217 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeec
Q 007211 433 QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTC 507 (612)
Q Consensus 433 Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~ 507 (612)
+.+.+++++++++ ++..++||+.|--..|.. ...+. ..++...+.+.++|+|+.+|.|..|-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~---------~p~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN---------YPTPE-QRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC---------CCCHH-HHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4578888888875 568899999995431211 11222 3456566666899999999999977553
No 135
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=86.00 E-value=5.4 Score=30.59 Aligned_cols=22 Identities=23% Similarity=0.317 Sum_probs=19.1
Q ss_pred EEEEEecCCCCCCEEEEEEeee
Q 007211 240 IHTSFLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~ 261 (612)
.+...+.+|+|++.|.++|...
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4678899999999999999764
No 136
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=84.09 E-value=25 Score=43.04 Aligned_cols=126 Identities=13% Similarity=0.122 Sum_probs=73.8
Q ss_pred ccceEEEEEEeeccc--ceEEEEEeCCC------CCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCC
Q 007211 124 TGKGSLKLMLINQRS--DFSVALFSGGL------LKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE 195 (612)
Q Consensus 124 ~g~~~~~~~l~n~r~--~~~f~~f~~~~------~~~~~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~ 195 (612)
++.| +.+.+.|.-- -|.|+.-.-+. +.|..| . +.|..|.+ .=+..-.+.++.|+|....- .
T Consensus 479 ss~g-~~~tv~nl~p~t~Y~~rv~A~n~~g~g~sS~pLkV--~-----t~pEgp~~-~~a~ats~~ti~v~WepP~~--~ 547 (1381)
T KOG4221|consen 479 SSPG-IQVTVQNLSPLTMYFFRVRAKNEAGSGESSAPLKV--T-----TQPEGPVQ-LQAYATSPTTILVTWEPPPF--G 547 (1381)
T ss_pred cCCc-eEEEeeecccceeEEEEEeccCcccCCccCCceEE--e-----cCCCCCcc-ccccccCcceEEEEecCCCC--C
Confidence 4555 7777777554 67777655221 122222 2 23446666 33344568999999998752 1
Q ss_pred CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEE
Q 007211 196 AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQF 275 (612)
Q Consensus 196 ~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F 275 (612)
..+...|..--... ....-..++ .--++.+|.||+|.|+|.|||......|.+.-|..-+|
T Consensus 548 n~~I~~yk~~ys~~--~~~~~~~~~-----------------~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V 608 (1381)
T KOG4221|consen 548 NGPITGYKLFYSED--DTGKELRVE-----------------NNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITV 608 (1381)
T ss_pred CCCceEEEEEEEcC--CCCceEEEe-----------------cCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEE
Confidence 23455554210000 000011111 12466788999999999999998766677666888889
Q ss_pred EcCC
Q 007211 276 KASP 279 (612)
Q Consensus 276 ~T~p 279 (612)
+|..
T Consensus 609 ~Tls 612 (1381)
T KOG4221|consen 609 RTLS 612 (1381)
T ss_pred Eecc
Confidence 9874
No 137
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=81.81 E-value=21 Score=37.39 Aligned_cols=19 Identities=26% Similarity=0.378 Sum_probs=16.7
Q ss_pred EEecCCCCCCEEEEEEeee
Q 007211 243 SFLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~ 261 (612)
.+|.||+||+.|-..|...
T Consensus 262 etI~~L~PG~~Yl~dV~~~ 280 (300)
T PF10179_consen 262 ETIKGLKPGTTYLFDVYVN 280 (300)
T ss_pred eecccCCCCcEEEEEEEEe
Confidence 4799999999999999875
No 138
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=81.78 E-value=2.7 Score=41.24 Aligned_cols=74 Identities=16% Similarity=0.249 Sum_probs=42.2
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHh---cCCccEEEEeCcccccCCch---------hHH-HHHHH----
Q 007211 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD---LKNIDIVFHIGDICYANGYI---------SQW-DQFTA---- 351 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~pDfvl~~GDi~Y~~g~~---------~~w-d~f~~---- 351 (612)
|++++|.+.... ....+.++.+++. ..+|+.+|++|+++...... ... ..+.+
T Consensus 1 Iv~~Sg~~~~~~----------~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (209)
T PF04042_consen 1 IVFASGPFLDSD----------NLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDS 70 (209)
T ss_dssp EEEEES--CTTT-----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHH
T ss_pred CEEEecCccCCC----------HhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHH
Confidence 578888887632 1124556666653 24699999999999753321 111 12222
Q ss_pred hhhhhhcCCCeEEcCCCCccC
Q 007211 352 QIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 352 ~i~~l~s~vP~~~v~GNHD~~ 372 (612)
.++.+...+++..+||+||..
T Consensus 71 ~~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 71 FLESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HHCCCHCCSEEEEE--TTCTT
T ss_pred HHhhcccccEEEEeCCCcccc
Confidence 234455688999999999975
No 139
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=79.98 E-value=4 Score=41.72 Aligned_cols=64 Identities=25% Similarity=0.459 Sum_probs=42.9
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCe---
Q 007211 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY--- 362 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~--- 362 (612)
-.||+.++|.|.-..+ + ++...=|+.+|+||.. ..|...+-..|-+.+ .+.|+
T Consensus 61 ~~r~VcisdtH~~~~~------------------i-~~~p~gDvlihagdfT-~~g~~~ev~~fn~~~----gslph~yK 116 (305)
T KOG3947|consen 61 YARFVCISDTHELTFD------------------I-NDIPDGDVLIHAGDFT-NLGLPEEVIKFNEWL----GSLPHEYK 116 (305)
T ss_pred ceEEEEecCcccccCc------------------c-ccCCCCceEEeccCCc-cccCHHHHHhhhHHh----ccCcceee
Confidence 4799999999864321 1 1346789999999999 555544334444433 34453
Q ss_pred EEcCCCCccCC
Q 007211 363 MIASGNHERDW 373 (612)
Q Consensus 363 ~~v~GNHD~~~ 373 (612)
+++.||||...
T Consensus 117 IVIaGNHELtF 127 (305)
T KOG3947|consen 117 IVIAGNHELTF 127 (305)
T ss_pred EEEeeccceee
Confidence 67899999864
No 140
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=69.29 E-value=22 Score=36.88 Aligned_cols=76 Identities=9% Similarity=0.071 Sum_probs=48.5
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC-------CccEEEEeCcccccC-----CchhHHHHHHHh
Q 007211 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK-------NIDIVFHIGDICYAN-----GYISQWDQFTAQ 352 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-------~pDfvl~~GDi~Y~~-----g~~~~wd~f~~~ 352 (612)
...+|+++||.+... +..++.++++.+..+ .|-.+|+.|+++... .....+.+.++.
T Consensus 26 ~~~~~VilSDV~LD~-----------p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~ 94 (291)
T PTZ00235 26 KRHNWIIMHDVYLDS-----------PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEK 94 (291)
T ss_pred CceEEEEEEeeccCC-----------HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHH
Confidence 347899999998864 334555555555431 288999999988542 112233333433
Q ss_pred hh--------hhhcCCCeEEcCCCCcc
Q 007211 353 IE--------PIASTVPYMIASGNHER 371 (612)
Q Consensus 353 i~--------~l~s~vP~~~v~GNHD~ 371 (612)
+. .+..+.-++.+||-.|-
T Consensus 95 La~llls~fp~L~~~s~fVFVPGpnDP 121 (291)
T PTZ00235 95 LSVMLISKFKLILEHCYLIFIPGINDP 121 (291)
T ss_pred HHHHHHHhChHHHhcCeEEEECCCCCC
Confidence 33 24556778999999996
No 141
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=57.32 E-value=19 Score=39.44 Aligned_cols=70 Identities=9% Similarity=0.247 Sum_probs=46.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007211 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
.||++.||....- ...++.++++-+.....|+++.+|++.-.+....+|..+.+-...+ .+|.|+.-
T Consensus 6 ~kILv~Gd~~Gr~-----------~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~v--PiptY~~g 72 (528)
T KOG2476|consen 6 AKILVCGDVEGRF-----------DELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTKKV--PIPTYFLG 72 (528)
T ss_pred ceEEEEcCccccH-----------HHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCccC--ceeEEEec
Confidence 5899999984321 1224455555555567999999999996555566666666554433 67878776
Q ss_pred CCC
Q 007211 367 GNH 369 (612)
Q Consensus 367 GNH 369 (612)
+|-
T Consensus 73 ~~~ 75 (528)
T KOG2476|consen 73 DNA 75 (528)
T ss_pred CCC
Confidence 665
No 142
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=48.15 E-value=50 Score=33.44 Aligned_cols=66 Identities=21% Similarity=0.331 Sum_probs=37.4
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC--ccEEEEeCcccccCCchhHHHHHHHhhhhhhcC--CCeEE
Q 007211 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN--IDIVFHIGDICYANGYISQWDQFTAQIEPIAST--VPYMI 364 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~--vP~~~ 364 (612)
+.+.||+|.. ..-+..+.+--.. -.=-+++||++ +.|+.+. +.|+=.+ .+.-+ --+..
T Consensus 45 vtvcGDIHGQ---------------f~Dllelf~igG~~~~t~YLFLGDyV-DRG~~Sv-Et~lLLl-~lK~rYP~ritL 106 (303)
T KOG0372|consen 45 VTVCGDIHGQ---------------FYDLLELFRIGGDVPETNYLFLGDYV-DRGYYSV-ETFLLLL-ALKVRYPDRITL 106 (303)
T ss_pred cEEeecccch---------------HHHHHHHHHhCCCCCCCceEeecchh-ccccchH-HHHHHHH-HHhhcCcceeEE
Confidence 6789999843 2234445542111 12467889999 5565432 3443322 12223 34778
Q ss_pred cCCCCccC
Q 007211 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||-+
T Consensus 107 iRGNHEsR 114 (303)
T KOG0372|consen 107 IRGNHESR 114 (303)
T ss_pred eeccchhh
Confidence 99999975
No 143
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=37.69 E-value=55 Score=33.69 Aligned_cols=50 Identities=22% Similarity=0.412 Sum_probs=33.5
Q ss_pred HHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCe-EEEecCccc
Q 007211 435 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVD-IAIYGHVHN 502 (612)
Q Consensus 435 ~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vd-lvlsGH~H~ 502 (612)
+.|+.+|+...+-.-| ++-.|.| + ..+ -+.+.+|+++++.| |||+||+-.
T Consensus 115 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E----~eq-p~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 115 EYLRKCLKLYKKIGVP--VVGIHCK-----------E----KEM-PEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHHhCCc--eEEEEec-----------c----hhc-hHHHHHHHHHhCCCEEEEeCchhh
Confidence 5799999876443333 2223322 1 122 56889999999999 689999954
No 144
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=37.11 E-value=43 Score=28.63 Aligned_cols=19 Identities=26% Similarity=0.351 Sum_probs=15.1
Q ss_pred EEEecCCCCCCEEEEEEee
Q 007211 242 TSFLKELWPNAMYTYKVGH 260 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~ 260 (612)
.++|.+|+|++.|..+|..
T Consensus 68 ~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 68 SVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEEES--TTSEEEEEEEE
T ss_pred EEEEeCCCCCCCEEEEEEE
Confidence 4679999999999999986
No 145
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=36.17 E-value=49 Score=35.24 Aligned_cols=23 Identities=17% Similarity=0.403 Sum_probs=19.9
Q ss_pred hHHHHHHHHHhcCCeEEEecCcc
Q 007211 479 GRESLQKLWQKYKVDIAIYGHVH 501 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H 501 (612)
+.+.+++++++.++|+++-+|.=
T Consensus 232 g~~~v~~f~~~~~ldlivRaHqv 254 (331)
T KOG0374|consen 232 GPAVVEDFCKKLDLDLIVRAHQV 254 (331)
T ss_pred cHHHHHHHHHHhCcceEEEcCcc
Confidence 36788999999999999999963
No 146
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=34.47 E-value=2.4e+02 Score=34.55 Aligned_cols=112 Identities=13% Similarity=0.189 Sum_probs=64.6
Q ss_pred eEEEEEEeeccc--ceEEEEEeCCCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee
Q 007211 127 GSLKLMLINQRS--DFSVALFSGGLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR 204 (612)
Q Consensus 127 ~~~~~~l~n~r~--~~~f~~f~~~~~~~~~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~ 204 (612)
|-|+++=+.++. .|.++.-+..-+. =+..+.+--.-|.+|..+++. +-..+.++|+|.-+.+ +..|...|-.
T Consensus 577 g~L~i~nv~l~~~G~Y~C~aqT~~Ds~---s~~A~l~V~gpPgpP~~v~~~-~i~~t~~~lsW~~g~d--n~SpI~~Y~i 650 (1051)
T KOG3513|consen 577 GRLTIANVSLEDSGKYTCVAQTALDSA---SARADLLVRGPPGPPPDVHVD-DISDTTARLSWSPGSD--NNSPIEKYTI 650 (1051)
T ss_pred cceEEEeeccccCceEEEEEEEeecch---hcccceEEecCCCCCCceeEe-eeccceEEEEeecCCC--CCCCceEEeE
Confidence 446666666665 5766665521110 011111112345677777763 2236899999998865 2356888865
Q ss_pred cCCC----CccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeee
Q 007211 205 KGGD----RTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 205 ~~~~----~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~ 261 (612)
.... .|..++ ++ |. .+.|- ++++..+|.|-..|.+||..-
T Consensus 651 q~rt~~~~~W~~v~-~v----------p~-----~~~~~-~sa~vv~L~Pwv~YeFRV~Av 694 (1051)
T KOG3513|consen 651 QFRTPFPGKWKAVT-TV----------PG-----NITGD-ESATVVNLSPWVEYEFRVVAV 694 (1051)
T ss_pred EecCCCCCcceEee-EC----------CC-----cccCc-cceeEEccCCCcceEEEEEEE
Confidence 4322 222211 11 11 12344 679999999999999999864
No 147
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=31.51 E-value=79 Score=32.74 Aligned_cols=50 Identities=22% Similarity=0.437 Sum_probs=33.4
Q ss_pred HHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCe-EEEecCccc
Q 007211 435 KFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVD-IAIYGHVHN 502 (612)
Q Consensus 435 ~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vd-lvlsGH~H~ 502 (612)
+.|+.+|+...+-.-| +.-.|.| + ..+ -+.+..|+++++.| |||+||+-.
T Consensus 116 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E----~eq-p~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 116 EYLNKCLKVYKQLGIP--AVGIHVP-----------E----KEQ-PEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred HHHHHHHHHHHHcCCc--eEEEEec-----------h----HHh-hHHHHHHHHHcCCCEEEEeCchhh
Confidence 5799999876433333 2223322 1 122 56889999999999 689999864
No 148
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=30.61 E-value=50 Score=32.80 Aligned_cols=65 Identities=25% Similarity=0.487 Sum_probs=37.0
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHh---cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCC--eE
Q 007211 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD---LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVP--YM 363 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~---~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP--~~ 363 (612)
+-+.||.|.. .--+.++.+. .++.. -|+.||++ +.|+.+. +.|. .+--+.++.| +-
T Consensus 48 VTvCGDIHGQ---------------FyDL~eLFrtgG~vP~tn-YiFmGDfV-DRGyySL-EtfT-~l~~LkaryP~~IT 108 (306)
T KOG0373|consen 48 VTVCGDIHGQ---------------FYDLLELFRTGGQVPDTN-YIFMGDFV-DRGYYSL-ETFT-LLLLLKARYPAKIT 108 (306)
T ss_pred eeEeeccchh---------------HHHHHHHHHhcCCCCCcc-eEEecccc-ccccccH-HHHH-HHHHHhhcCCceeE
Confidence 6688999743 2234555553 23333 45679999 5565431 2333 2223344444 56
Q ss_pred EcCCCCccC
Q 007211 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
...||||-+
T Consensus 109 LlRGNHEsR 117 (306)
T KOG0373|consen 109 LLRGNHESR 117 (306)
T ss_pred Eeeccchhh
Confidence 689999975
No 149
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=29.95 E-value=1.3e+02 Score=30.92 Aligned_cols=66 Identities=23% Similarity=0.296 Sum_probs=35.9
Q ss_pred EEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc-CCcc-EEEEeCcccccCCchhHHHHHHHhhhhhhcC--CCeEE
Q 007211 289 VVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL-KNID-IVFHIGDICYANGYISQWDQFTAQIEPIAST--VPYMI 364 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~pD-fvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~--vP~~~ 364 (612)
+.+.||.|.. ..-+.++.+.- ..|| -.++.||.+ +.|+.+ ++-...+-.+.-+ --+-.
T Consensus 62 vtvcGDvHGq---------------f~dl~ELfkiGG~~pdtnylfmGDyv-drGy~S--vetVS~lva~Kvry~~rvti 123 (319)
T KOG0371|consen 62 VTVCGDVHGQ---------------FHDLIELFKIGGLAPDTNYLFMGDYV-DRGYYS--VETVSLLVALKVRYPDRVTI 123 (319)
T ss_pred eEEecCcchh---------------HHHHHHHHHccCCCCCcceeeeeeec-ccccch--HHHHHHHHHhhccccceeEE
Confidence 7789999843 12233444421 1244 356789999 556544 2222222222212 23667
Q ss_pred cCCCCccC
Q 007211 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
++||||..
T Consensus 124 lrGNHEsr 131 (319)
T KOG0371|consen 124 LRGNHESR 131 (319)
T ss_pred ecCchHHH
Confidence 99999975
No 150
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=29.88 E-value=71 Score=27.47 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=20.4
Q ss_pred CCeEEEEEecCCCCCCEEEEEEee
Q 007211 237 PGYIHTSFLKELWPNAMYTYKVGH 260 (612)
Q Consensus 237 ~g~~h~a~ltgL~P~t~Y~Yrvg~ 260 (612)
.+-+.++.+.++.+|+.|.|+|..
T Consensus 43 ~~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 43 YGGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred cCCEEEEEECCCCCCCEEEEEECC
Confidence 356788899999999999999953
No 151
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=27.93 E-value=86 Score=29.56 Aligned_cols=18 Identities=17% Similarity=0.119 Sum_probs=14.9
Q ss_pred EecCCCCCCEEEEEEeee
Q 007211 244 FLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~ 261 (612)
.+++|.|||+|+.+....
T Consensus 105 qVtNL~pGTkY~isY~Vt 122 (184)
T PF07353_consen 105 QVTNLQPGTKYYISYLVT 122 (184)
T ss_pred EeeccCCCcEEEEEEEEe
Confidence 579999999998777654
No 152
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=27.46 E-value=3.1e+02 Score=23.59 Aligned_cols=23 Identities=13% Similarity=0.235 Sum_probs=18.7
Q ss_pred HHHHHHHHHhcCCeEEEecCccc
Q 007211 480 RESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 480 r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
.+.+.+..+++++|+++-|+.+.
T Consensus 74 ~~~I~~~~~~~~~dllviG~~~~ 96 (124)
T cd01987 74 AEAIVEFAREHNVTQIVVGKSRR 96 (124)
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC
Confidence 46788888999999988888754
No 153
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=26.98 E-value=2.5e+02 Score=33.64 Aligned_cols=116 Identities=15% Similarity=0.125 Sum_probs=64.1
Q ss_pred CcceeeecCCC-CCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceecc----C----
Q 007211 169 PVYPRLAQGKT-WNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWR----D---- 236 (612)
Q Consensus 169 p~~~~La~~~~-~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~----~---- 236 (612)
+.-.+++.+.. .+++.+.|..-.... --.-.+.|.+.+.. ..+.+...+-||. .-|. +
T Consensus 489 ~~~l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~q------NvT~~dg~~aCg~----~~W~~~~v~~~~~ 558 (1025)
T KOG4258|consen 489 DLVLQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQ------NVTEEDGRDACGS----NSWNVVDVDPPDL 558 (1025)
T ss_pred cceeeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCcc------ccceecCcccccc----CcceEEeccCCcC
Confidence 44455555543 688888887643210 00123444443321 1223555566763 1120 0
Q ss_pred -C--CeEEEEEecCCCCCCEEEEEEeeecC----CCCccccceEEEEcCCCCCCCCCeEEEEEeec
Q 007211 237 -P--GYIHTSFLKELWPNAMYTYKVGHRLF----NSTYIWSSEYQFKASPYPGQNSLQRVVIFGDM 295 (612)
Q Consensus 237 -~--g~~h~a~ltgL~P~t~Y~Yrvg~~~~----dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~ 295 (612)
| ++.-...|.||+|.|+|.|-|..-.. +.-.+.|++..|+|.|... ..++.++.-++.
T Consensus 559 ~p~~~~~~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~P-spPl~~ls~sns 623 (1025)
T KOG4258|consen 559 IPNDGTHPGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIP-SPPLDVLSKSNS 623 (1025)
T ss_pred CCccccccceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCCC-CCcchhhhccCc
Confidence 1 23336789999999999999875421 1112568999999988643 335556655554
No 154
>TIGR02039 CysD sulfate adenylyltransferase, small subunit. In Escherichia coli, ATP sulfurylase is a heterodimer composed of two subunits encoded by cysD and cysN, with APS kinase encoded by cysC. These genes are located in a unidirectionally transcribed gene cluster, and have been shown to be required for the synthesis of sulfur-containing amino acids. Homologous to this E.coli activation pathway are nodPQH gene products found among members of the Rhizobiaceae family. These gene products have been shown to exhibit ATP sulfurase and APS kinase activity, yet are involved in Nod factor sulfation, and sulfation of other macromolecules.
Probab=26.92 E-value=2.2e+02 Score=29.83 Aligned_cols=81 Identities=19% Similarity=0.220 Sum_probs=42.5
Q ss_pred EEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEE
Q 007211 416 FRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIA 495 (612)
Q Consensus 416 v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vdlv 495 (612)
+.++.+||...| .+.+++.++.-+.. +.+.+++.....+.+....+..........+.++.|...+.++++|++
T Consensus 50 ~~vl~IDTG~~F---~Et~efrd~~a~~~---gl~l~v~~~~~~~~~g~~~~~~~~~~~c~vlK~~pL~~al~e~g~da~ 123 (294)
T TIGR02039 50 FPLLHVDTGWKF---REMIAFRDHMVAKY---GLRLIVHSNEEGIADGINPFTEGSALHTDIMKTEALRQALDKNQFDAA 123 (294)
T ss_pred eEEEEEecCCCC---HHHHHHHHHHHHHh---CCCEEEEechhhhhcCccccccChHHHhhHHHHHHHHHHHHHcCCCEE
Confidence 567889998765 36777776655543 334222211111101111110000001112224678888889999999
Q ss_pred EecCccc
Q 007211 496 IYGHVHN 502 (612)
Q Consensus 496 lsGH~H~ 502 (612)
|.||.=.
T Consensus 124 itG~RRD 130 (294)
T TIGR02039 124 FGGARRD 130 (294)
T ss_pred EecCChh
Confidence 9999644
No 155
>PF00879 Defensin_propep: Defensin propeptide The pattern for this Prosite entry doesn't match the propeptide.; InterPro: IPR002366 Defensins are 2-6 kDa, cationic, microbicidal peptides active against many Gram-negative and Gram-positive bacteria, fungi, and enveloped viruses [], containing three pairs of intramolecular disulphide bonds []. On the basis of their size and pattern of disulphide bonding, mammalian defensins are classified into alpha, beta and theta categories. Alpha-defensins, which have been identified in humans, monkeys and several rodent species, are particularly abundant in neutrophils, certain macrophage populations and Paneth cells of the small intestine. Every mammalian species explored thus far has beta-defensins. In cows, as many as 13 beta-defensins exist in neutrophils. However, in other species, beta-defensins are more often produced by epithelial cells lining various organs (e.g. the epidermis, bronchial tree and genitourinary tract). Theta-defensins are cyclic and have so far only been identified in primate phagocytes. Defensins are produced constitutively and/or in response to microbial products or proinflammatory cytokines. Some defensins are also called corticostatins (CS) because they inhibit corticotropin-stimulated corticosteroid production. The mechanism(s) by which microorganisms are killed and/or inactivated by defensins is not understood completely. However, it is generally believed that killing is a consequence of disruption of the microbial membrane. The polar topology of defensins, with spatially separated charged and hydrophobic regions, allows them to insert themselves into the phospholipid membranes so that their hydrophobic regions are buried within the lipid membrane interior and their charged (mostly cationic) regions interact with anionic phospholipid head groups and water. Subsequently, some defensins can aggregate to form `channel-like' pores; others might bind to and cover the microbial membrane in a `carpet-like' manner. The net outcome is the disruption of membrane integrity and function, which ultimately leads to the lysis of microorganisms. Some defensins are synthesized as propeptides which may be relevant to this process - in neutrophils only the mature peptides have been identified but in Paneth cells, the propeptide is stored in vesicles [] and appears to be cleaved by trypsin on activation. ; GO: 0006952 defense response
Probab=26.42 E-value=1.4e+02 Score=22.83 Aligned_cols=15 Identities=13% Similarity=0.430 Sum_probs=10.8
Q ss_pred CccccEEEEEEeCCC
Q 007211 58 GQNSEWVTVEYSSPN 72 (612)
Q Consensus 58 ~~~~~~v~~~~~~~~ 72 (612)
|.+.+-|.|++.|..
T Consensus 36 g~edQdv~ISf~~~e 50 (52)
T PF00879_consen 36 GAEDQDVSISFAGDE 50 (52)
T ss_pred CccCCcEEEEecCCC
Confidence 455577999998853
No 156
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=26.33 E-value=88 Score=25.81 Aligned_cols=21 Identities=10% Similarity=0.162 Sum_probs=18.2
Q ss_pred CeEEEEEecCCCCCCEEEEEEe
Q 007211 238 GYIHTSFLKELWPNAMYTYKVG 259 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg 259 (612)
+-++++++.++ +|..|.|++.
T Consensus 39 ~G~W~~~v~~~-~g~~Y~y~v~ 59 (85)
T cd02853 39 DGWFEAEVPGA-AGTRYRYRLD 59 (85)
T ss_pred CcEEEEEeCCC-CCCeEEEEEC
Confidence 34678899999 9999999996
No 157
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=24.71 E-value=95 Score=26.43 Aligned_cols=24 Identities=17% Similarity=0.124 Sum_probs=20.5
Q ss_pred CCeEEEEEecCCCCCCEEEEEEee
Q 007211 237 PGYIHTSFLKELWPNAMYTYKVGH 260 (612)
Q Consensus 237 ~g~~h~a~ltgL~P~t~Y~Yrvg~ 260 (612)
.+-++++.+.++.+|..|.|++..
T Consensus 45 ~~gvw~~~v~~~~~g~~Y~y~i~~ 68 (100)
T cd02860 45 ENGVWSVTLDGDLEGYYYLYEVKV 68 (100)
T ss_pred CCCEEEEEeCCccCCcEEEEEEEE
Confidence 356788899999999999999964
No 158
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=24.70 E-value=89 Score=27.56 Aligned_cols=22 Identities=32% Similarity=0.694 Sum_probs=19.8
Q ss_pred CeEEEEEecCCCCCCEEEEEEe
Q 007211 238 GYIHTSFLKELWPNAMYTYKVG 259 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg 259 (612)
+-++++.+.++.+|+.|-|+|.
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~ 69 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVD 69 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEEC
Confidence 4578899999999999999996
No 159
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=22.71 E-value=58 Score=37.35 Aligned_cols=50 Identities=28% Similarity=0.423 Sum_probs=30.6
Q ss_pred HHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcCCCCccCC
Q 007211 317 TRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDW 373 (612)
Q Consensus 317 ~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~ 373 (612)
+..+++. --+|-+-++||+. ++|... |..++.+ ...--+=.-+||||.-|
T Consensus 176 l~~lIqr-L~VDhLHIvGDIy-DRGp~p--d~ImD~L---m~~hsvDIQWGNHDIlW 225 (640)
T PF06874_consen 176 LSELIQR-LAVDHLHIVGDIY-DRGPRP--DKIMDRL---MNYHSVDIQWGNHDILW 225 (640)
T ss_pred HHHHHHH-Hhhhheeeccccc-CCCCCh--hHHHHHH---hcCCCccccccchHHHH
Confidence 3344443 3588899999999 455433 3444443 33334456899999876
No 160
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=20.16 E-value=2.4e+02 Score=28.91 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=49.9
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCch-hHH--HHHHHhhhhhhcCCCe
Q 007211 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYI-SQW--DQFTAQIEPIASTVPY 362 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~-~~w--d~f~~~i~~l~s~vP~ 362 (612)
..+|++.+|.+.... -..++.+++ .+|+++|+.|=.+|--|+. ..| +.-.+.++.+.+..+-
T Consensus 176 ~~~i~faSDvqGp~~-------------~~~l~~i~e--~~P~v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~~~ 240 (304)
T COG2248 176 KSSIVFASDVQGPIN-------------DEALEFILE--KRPDVLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEETNA 240 (304)
T ss_pred CeEEEEcccccCCCc-------------cHHHHHHHh--cCCCEEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhCcc
Confidence 468999999874322 245777777 6899999999999876653 223 3444556667777766
Q ss_pred EEcCCCCccCC
Q 007211 363 MIASGNHERDW 373 (612)
Q Consensus 363 ~~v~GNHD~~~ 373 (612)
-.++.-|=.+.
T Consensus 241 ~lViDHHllRD 251 (304)
T COG2248 241 TLVIDHHLLRD 251 (304)
T ss_pred eEEEeehhhcC
Confidence 66777776553
Done!