Query 007212
Match_columns 612
No_of_seqs 268 out of 3348
Neff 8.1
Searched_HMMs 46136
Date Thu Mar 28 20:28:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007212.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007212hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02939 transferase, transfer 100.0 3.8E-69 8.2E-74 604.1 49.1 467 82-590 479-970 (977)
2 PRK14099 glycogen synthase; Pr 100.0 9.6E-68 2.1E-72 580.2 47.9 467 82-590 1-482 (485)
3 PRK14098 glycogen synthase; Pr 100.0 2.4E-67 5.2E-72 577.6 48.1 467 84-588 5-487 (489)
4 TIGR02095 glgA glycogen/starch 100.0 1.3E-63 2.9E-68 549.6 47.6 459 85-587 1-473 (473)
5 PLN02316 synthase/transferase 100.0 1.3E-62 2.7E-67 561.6 49.1 435 77-588 580-1035(1036)
6 PRK00654 glgA glycogen synthas 100.0 2.1E-62 4.5E-67 538.4 47.7 453 85-589 1-465 (466)
7 cd03791 GT1_Glycogen_synthase_ 100.0 3.7E-59 7.9E-64 515.0 46.9 462 86-585 1-475 (476)
8 COG0297 GlgA Glycogen synthase 100.0 4.1E-59 8.9E-64 500.3 42.2 464 85-590 1-481 (487)
9 TIGR02094 more_P_ylases alpha- 100.0 8.7E-40 1.9E-44 362.6 39.6 462 99-584 17-598 (601)
10 PRK10307 putative glycosyl tra 100.0 2.6E-39 5.6E-44 350.4 38.6 396 85-590 1-411 (412)
11 TIGR02468 sucrsPsyn_pln sucros 100.0 2E-39 4.3E-44 370.2 39.0 451 82-591 167-675 (1050)
12 TIGR03449 mycothiol_MshA UDP-N 100.0 6.7E-39 1.4E-43 346.1 37.4 387 87-589 1-404 (405)
13 TIGR02472 sucr_P_syn_N sucrose 100.0 1.7E-38 3.7E-43 346.6 39.1 393 95-585 22-439 (439)
14 cd03796 GT1_PIG-A_like This fa 100.0 1.5E-38 3.3E-43 342.9 37.3 364 86-590 1-371 (398)
15 TIGR02149 glgA_Coryne glycogen 100.0 3.1E-38 6.6E-43 338.5 38.0 373 85-588 1-388 (388)
16 PLN02871 UDP-sulfoquinovose:DA 100.0 2.6E-38 5.6E-43 347.8 38.0 376 82-590 56-438 (465)
17 TIGR02470 sucr_synth sucrose s 100.0 1.3E-37 2.9E-42 349.2 38.8 428 83-584 254-745 (784)
18 cd04962 GT1_like_5 This family 100.0 1.2E-36 2.6E-41 323.5 38.2 365 85-587 1-371 (371)
19 PRK15484 lipopolysaccharide 1, 100.0 1.4E-36 3.1E-41 325.4 38.0 362 85-588 3-379 (380)
20 PRK15427 colanic acid biosynth 100.0 1.7E-36 3.6E-41 327.2 36.2 275 228-587 118-406 (406)
21 PLN00142 sucrose synthase 100.0 2.6E-36 5.6E-41 338.8 35.6 323 227-584 407-768 (815)
22 cd03800 GT1_Sucrose_synthase T 100.0 8.6E-35 1.9E-39 311.9 35.4 381 84-581 6-397 (398)
23 cd03818 GT1_ExpC_like This fam 100.0 2.5E-34 5.4E-39 309.9 37.1 228 312-582 151-396 (396)
24 cd04299 GT1_Glycogen_Phosphory 100.0 2E-34 4.3E-39 324.7 37.6 475 86-588 87-692 (778)
25 TIGR03088 stp2 sugar transfera 100.0 1.3E-34 2.8E-39 309.3 33.9 230 314-587 133-373 (374)
26 cd03802 GT1_AviGT4_like This f 100.0 3.2E-34 6.9E-39 300.2 35.4 330 85-585 1-335 (335)
27 PLN02846 digalactosyldiacylgly 100.0 7.8E-35 1.7E-39 312.9 30.9 380 82-587 2-392 (462)
28 cd03805 GT1_ALG2_like This fam 100.0 3.5E-34 7.6E-39 307.4 32.8 229 310-580 147-392 (392)
29 cd03792 GT1_Trehalose_phosphor 100.0 9.8E-34 2.1E-38 302.6 35.8 275 228-587 85-372 (372)
30 PRK10125 putative glycosyl tra 100.0 6.9E-34 1.5E-38 306.2 33.4 382 85-587 1-405 (405)
31 cd04955 GT1_like_6 This family 100.0 6.6E-33 1.4E-37 293.3 38.1 356 86-585 1-363 (363)
32 cd03814 GT1_like_2 This family 100.0 7.6E-33 1.6E-37 291.3 35.4 360 86-585 1-364 (364)
33 cd03825 GT1_wcfI_like This fam 100.0 1.4E-32 3E-37 290.8 35.5 352 85-587 1-365 (365)
34 cd03819 GT1_WavL_like This fam 100.0 1.1E-32 2.5E-37 290.8 33.3 338 99-576 8-355 (355)
35 PRK09922 UDP-D-galactose:(gluc 100.0 3.5E-33 7.5E-38 297.0 29.5 220 315-589 131-358 (359)
36 cd05844 GT1_like_7 Glycosyltra 100.0 1E-32 2.3E-37 292.9 32.5 272 228-582 82-366 (367)
37 cd04951 GT1_WbdM_like This fam 100.0 2.4E-32 5.2E-37 288.4 35.1 353 86-585 1-359 (360)
38 cd03807 GT1_WbnK_like This fam 100.0 1.6E-32 3.4E-37 287.6 33.4 357 86-585 1-365 (365)
39 cd03795 GT1_like_4 This family 100.0 2.8E-32 6E-37 287.6 34.2 349 86-577 1-357 (357)
40 cd03794 GT1_wbuB_like This fam 100.0 4.9E-32 1.1E-36 286.1 35.3 383 86-581 1-394 (394)
41 KOG1111 N-acetylglucosaminyltr 100.0 1.5E-33 3.2E-38 280.5 21.3 368 85-592 1-372 (426)
42 cd03821 GT1_Bme6_like This fam 100.0 3.5E-32 7.5E-37 286.1 32.7 367 86-582 1-375 (375)
43 cd03823 GT1_ExpE7_like This fa 100.0 7.7E-32 1.7E-36 282.7 34.0 357 86-585 1-358 (359)
44 cd03812 GT1_CapH_like This fam 100.0 6.2E-32 1.3E-36 285.5 32.1 349 86-577 1-353 (358)
45 cd03817 GT1_UGDG_like This fam 100.0 1.5E-31 3.2E-36 281.6 34.6 365 86-586 1-373 (374)
46 cd03799 GT1_amsK_like This is 100.0 1.7E-31 3.7E-36 281.3 34.9 341 86-579 1-354 (355)
47 PRK15179 Vi polysaccharide bio 100.0 1.1E-31 2.4E-36 302.1 35.0 227 318-585 459-692 (694)
48 cd03801 GT1_YqgM_like This fam 100.0 4.3E-31 9.3E-36 275.7 36.7 367 86-585 1-374 (374)
49 cd03822 GT1_ecORF704_like This 100.0 3.7E-31 8E-36 278.9 34.6 349 86-585 1-366 (366)
50 PLN02949 transferase, transfer 100.0 6.5E-31 1.4E-35 286.3 35.5 229 312-591 215-461 (463)
51 cd03809 GT1_mtfB_like This fam 100.0 1.9E-31 4.1E-36 281.1 29.9 359 86-581 1-364 (365)
52 PF08323 Glyco_transf_5: Starc 100.0 7E-33 1.5E-37 278.0 17.5 234 86-346 1-243 (245)
53 cd03798 GT1_wlbH_like This fam 100.0 1.3E-30 2.9E-35 273.1 35.5 372 87-587 1-377 (377)
54 cd03816 GT1_ALG1_like This fam 100.0 2.2E-30 4.7E-35 280.8 35.8 372 84-578 3-408 (415)
55 cd03820 GT1_amsD_like This fam 100.0 1.3E-30 2.8E-35 270.8 31.9 340 86-582 1-348 (348)
56 cd03806 GT1_ALG11_like This fa 100.0 1.3E-30 2.8E-35 282.6 32.6 218 310-578 182-418 (419)
57 cd03813 GT1_like_3 This family 100.0 1.8E-31 3.9E-36 294.0 26.1 287 227-585 172-475 (475)
58 cd03808 GT1_cap1E_like This fa 100.0 3.7E-30 7.9E-35 268.7 33.6 352 86-581 1-358 (359)
59 PRK15490 Vi polysaccharide bio 100.0 4.4E-30 9.6E-35 277.0 30.6 222 321-586 342-575 (578)
60 cd03793 GT1_Glycogen_synthase_ 100.0 1.5E-29 3.2E-34 273.0 30.8 440 99-589 14-589 (590)
61 TIGR03087 stp1 sugar transfera 100.0 2.2E-29 4.8E-34 271.5 25.1 222 309-585 164-395 (397)
62 cd03811 GT1_WabH_like This fam 100.0 3.5E-28 7.7E-33 252.7 31.2 334 86-565 1-342 (353)
63 cd03804 GT1_wbaZ_like This fam 100.0 3.1E-28 6.7E-33 257.8 28.8 205 310-580 146-350 (351)
64 PLN02501 digalactosyldiacylgly 100.0 2E-28 4.3E-33 266.4 27.6 208 318-585 499-708 (794)
65 PHA01633 putative glycosyl tra 100.0 1.8E-27 4E-32 246.8 32.6 225 309-582 84-335 (335)
66 TIGR02918 accessory Sec system 100.0 3.3E-28 7.2E-33 267.5 28.6 224 314-587 267-500 (500)
67 PHA01630 putative group 1 glyc 100.0 3.9E-28 8.5E-33 254.2 26.2 231 309-586 85-330 (331)
68 cd04946 GT1_AmsK_like This fam 100.0 2.5E-27 5.5E-32 256.2 33.2 220 309-581 175-406 (407)
69 PLN02275 transferase, transfer 100.0 2.3E-26 5E-31 245.8 29.9 190 310-551 158-371 (371)
70 cd04949 GT1_gtfA_like This fam 99.9 6.4E-26 1.4E-30 241.9 24.5 215 311-580 151-372 (372)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.9 2.6E-25 5.5E-30 243.4 23.3 291 229-583 132-458 (460)
72 TIGR02400 trehalose_OtsA alpha 99.9 8.8E-25 1.9E-29 237.6 25.9 291 230-584 129-454 (456)
73 PRK00726 murG undecaprenyldiph 99.9 1.1E-23 2.4E-28 223.8 32.0 342 85-585 2-356 (357)
74 TIGR01133 murG undecaprenyldip 99.9 1.7E-22 3.7E-27 213.5 30.7 321 85-566 1-332 (348)
75 cd03785 GT1_MurG MurG is an N- 99.9 2.5E-22 5.5E-27 212.4 31.8 321 86-567 1-336 (350)
76 PRK13609 diacylglycerol glucos 99.9 2.3E-22 5.1E-27 215.5 27.9 221 315-587 145-372 (380)
77 PLN03063 alpha,alpha-trehalose 99.9 4.9E-22 1.1E-26 228.9 27.5 298 230-590 149-481 (797)
78 cd04950 GT1_like_1 Glycosyltra 99.9 2.8E-21 6.1E-26 206.7 30.9 222 309-586 145-371 (373)
79 PRK14501 putative bifunctional 99.9 8.5E-22 1.8E-26 227.1 22.2 297 230-590 135-466 (726)
80 PLN02605 monogalactosyldiacylg 99.9 3.9E-20 8.5E-25 198.5 32.8 216 315-583 148-378 (382)
81 PF00534 Glycos_transf_1: Glyc 99.9 4.1E-21 9E-26 182.0 19.6 164 388-567 2-170 (172)
82 KOG0853 Glycosyltransferase [C 99.9 7.8E-21 1.7E-25 201.8 23.6 240 314-588 206-469 (495)
83 PRK13608 diacylglycerol glucos 99.9 2.3E-20 4.9E-25 200.8 26.1 223 315-589 145-374 (391)
84 PRK05749 3-deoxy-D-manno-octul 99.9 4.1E-20 8.8E-25 201.2 27.5 234 309-589 170-422 (425)
85 cd01635 Glycosyltransferase_GT 99.8 2.5E-19 5.5E-24 175.5 23.4 117 408-524 109-228 (229)
86 TIGR02398 gluc_glyc_Psyn gluco 99.8 3.4E-19 7.4E-24 193.1 25.9 290 230-582 134-478 (487)
87 PRK09814 beta-1,6-galactofuran 99.8 2.2E-16 4.7E-21 166.3 30.0 185 308-566 114-309 (333)
88 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 4.8E-17 1E-21 173.0 24.3 216 314-583 138-361 (363)
89 PRK00025 lpxB lipid-A-disaccha 99.8 2.5E-16 5.5E-21 168.7 29.5 218 314-588 131-375 (380)
90 PF05693 Glycogen_syn: Glycoge 99.8 4.2E-16 9.1E-21 167.9 29.3 437 99-590 9-585 (633)
91 TIGR00236 wecB UDP-N-acetylglu 99.7 1.3E-16 2.9E-21 170.1 23.4 200 316-566 140-345 (365)
92 PLN03064 alpha,alpha-trehalose 99.7 2.6E-16 5.6E-21 180.9 27.1 297 230-589 233-564 (934)
93 COG0438 RfaG Glycosyltransfera 99.7 1.5E-15 3.2E-20 156.5 25.2 223 317-589 150-379 (381)
94 KOG1387 Glycosyltransferase [C 99.7 1.9E-14 4.1E-19 143.5 25.4 223 316-590 221-462 (465)
95 KOG2941 Beta-1,4-mannosyltrans 99.6 1.6E-12 3.4E-17 130.1 29.3 299 228-581 103-436 (444)
96 PF13692 Glyco_trans_1_4: Glyc 99.6 6.5E-15 1.4E-19 133.7 9.8 130 403-553 2-135 (135)
97 TIGR00215 lpxB lipid-A-disacch 99.5 5.4E-12 1.2E-16 135.5 28.7 191 312-553 133-347 (385)
98 TIGR03713 acc_sec_asp1 accesso 99.5 1.3E-12 2.7E-17 144.4 20.7 162 404-584 320-519 (519)
99 PRK10117 trehalose-6-phosphate 99.5 5.2E-12 1.1E-16 136.0 23.5 295 230-588 125-455 (474)
100 PF00982 Glyco_transf_20: Glyc 99.5 1.1E-11 2.3E-16 135.1 25.5 295 229-584 142-472 (474)
101 COG0058 GlgP Glucan phosphoryl 99.4 1E-11 2.2E-16 138.1 19.3 433 100-553 114-662 (750)
102 PF13439 Glyco_transf_4: Glyco 99.4 2.6E-12 5.7E-17 120.9 11.4 176 87-363 1-176 (177)
103 PLN02205 alpha,alpha-trehalose 99.3 1.6E-10 3.5E-15 134.0 25.0 298 230-588 203-553 (854)
104 PF13579 Glyco_trans_4_4: Glyc 99.3 4.7E-12 1E-16 117.1 9.5 160 101-357 1-160 (160)
105 COG0380 OtsA Trehalose-6-phosp 99.3 7.9E-10 1.7E-14 118.7 27.4 294 230-585 149-478 (486)
106 PRK12446 undecaprenyldiphospho 99.2 4.4E-08 9.5E-13 103.9 31.8 168 389-585 173-350 (352)
107 PRK14985 maltodextrin phosphor 99.1 2E-09 4.3E-14 121.1 20.1 294 228-526 302-680 (798)
108 PRK14986 glycogen phosphorylas 99.1 3.6E-09 7.9E-14 119.4 22.0 295 230-527 314-695 (815)
109 PF13524 Glyco_trans_1_2: Glyc 99.1 2.5E-10 5.3E-15 96.6 8.9 89 480-582 1-92 (92)
110 COG0707 MurG UDP-N-acetylgluco 99.1 2.6E-07 5.7E-12 97.5 32.8 342 85-587 1-354 (357)
111 TIGR02919 accessory Sec system 99.1 3.2E-09 7E-14 114.8 17.8 171 316-553 238-411 (438)
112 TIGR02093 P_ylase glycogen/sta 99.1 4E-09 8.7E-14 118.8 18.5 292 228-526 297-678 (794)
113 cd04300 GT1_Glycogen_Phosphory 99.1 1.7E-08 3.6E-13 114.4 23.1 315 201-526 274-681 (797)
114 PF00343 Phosphorylase: Carboh 99.0 3.5E-08 7.6E-13 110.2 19.6 288 231-526 216-595 (713)
115 PF09314 DUF1972: Domain of un 98.8 1.5E-07 3.4E-12 89.3 17.0 182 85-359 2-185 (185)
116 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 5.9E-06 1.3E-10 88.2 24.2 263 228-583 93-364 (365)
117 KOG3742 Glycogen synthase [Car 98.6 1.2E-07 2.5E-12 98.2 7.0 320 229-588 174-614 (692)
118 cd03784 GT1_Gtf_like This fami 98.5 2.2E-05 4.8E-10 84.8 24.8 124 402-553 239-372 (401)
119 PF13528 Glyco_trans_1_3: Glyc 98.5 1.5E-05 3.3E-10 83.2 22.6 119 402-550 192-317 (318)
120 PF04007 DUF354: Protein of un 98.5 2.4E-05 5.2E-10 81.8 21.7 175 314-553 122-310 (335)
121 TIGR03492 conserved hypothetic 98.4 0.00012 2.7E-09 78.9 27.1 191 314-564 157-373 (396)
122 TIGR03590 PseG pseudaminic aci 98.4 3.9E-05 8.4E-10 78.8 21.3 96 404-509 172-268 (279)
123 PF02350 Epimerase_2: UDP-N-ac 98.4 4.9E-05 1.1E-09 80.4 22.4 271 228-584 67-345 (346)
124 PF13477 Glyco_trans_4_2: Glyc 98.3 1.2E-05 2.6E-10 73.0 12.9 34 86-128 1-34 (139)
125 COG0381 WecB UDP-N-acetylgluco 98.1 0.0083 1.8E-07 62.9 30.5 223 316-588 144-372 (383)
126 COG0763 LpxB Lipid A disacchar 98.1 0.00027 5.8E-09 73.7 18.9 193 312-554 131-345 (381)
127 PF02684 LpxB: Lipid-A-disacch 98.0 0.0018 4E-08 68.7 25.0 192 312-553 128-340 (373)
128 PRK01021 lpxB lipid-A-disaccha 98.0 0.0026 5.7E-08 70.7 25.3 196 312-553 356-571 (608)
129 PHA03392 egt ecdysteroid UDP-g 97.9 0.0057 1.2E-07 68.2 27.7 122 404-553 298-432 (507)
130 PF13844 Glyco_transf_41: Glyc 97.9 0.00065 1.4E-08 73.7 18.3 178 391-588 275-468 (468)
131 COG1819 Glycosyl transferases, 97.9 0.0009 2E-08 72.4 19.3 158 403-584 238-399 (406)
132 COG1519 KdtA 3-deoxy-D-manno-o 97.9 0.0029 6.4E-08 66.8 22.2 209 309-567 169-398 (419)
133 COG1817 Uncharacterized protei 97.8 0.0042 9E-08 62.8 20.5 185 312-553 121-314 (346)
134 TIGR00661 MJ1255 conserved hyp 97.8 0.0022 4.8E-08 67.2 19.8 119 404-553 190-314 (321)
135 PRK10017 colanic acid biosynth 97.6 0.19 4.2E-06 54.6 32.8 215 309-566 168-403 (426)
136 PRK02797 4-alpha-L-fucosyltran 97.3 0.021 4.6E-07 58.2 18.5 165 404-589 146-319 (322)
137 TIGR01426 MGT glycosyltransfer 97.2 0.0081 1.7E-07 64.7 15.1 156 403-583 226-389 (392)
138 COG4641 Uncharacterized protei 97.0 0.063 1.4E-06 56.0 18.9 188 350-589 162-364 (373)
139 PF07429 Glyco_transf_56: 4-al 96.9 0.34 7.3E-06 50.4 23.1 164 404-587 185-356 (360)
140 PF04464 Glyphos_transf: CDP-G 96.9 0.041 8.8E-07 58.8 17.3 199 311-553 128-336 (369)
141 COG3914 Spy Predicted O-linked 96.9 0.029 6.4E-07 61.2 15.6 180 392-590 421-617 (620)
142 COG3660 Predicted nucleoside-d 96.8 0.15 3.3E-06 50.6 18.4 103 402-509 161-273 (329)
143 PF00862 Sucrose_synth: Sucros 96.7 0.0036 7.8E-08 67.3 7.0 82 227-330 400-481 (550)
144 PRK14089 ipid-A-disaccharide s 96.4 0.18 4E-06 53.3 17.7 90 404-507 169-260 (347)
145 PF12000 Glyco_trans_4_3: Gkyc 96.4 0.02 4.3E-07 54.0 9.1 41 312-363 130-170 (171)
146 KOG1050 Trehalose-6-phosphate 96.1 0.32 6.8E-06 56.1 18.4 264 229-554 141-441 (732)
147 COG4671 Predicted glycosyl tra 95.4 4.3 9.2E-05 42.4 23.2 136 403-553 220-365 (400)
148 COG3980 spsG Spore coat polysa 95.0 1.4 3.1E-05 44.4 16.1 88 405-504 161-249 (318)
149 PF06258 Mito_fiss_Elm1: Mitoc 94.8 0.52 1.1E-05 49.1 13.5 104 404-511 148-259 (311)
150 PF11440 AGT: DNA alpha-glucos 94.7 5.5 0.00012 40.2 20.5 137 407-553 187-353 (355)
151 PF11997 DUF3492: Domain of un 94.6 0.057 1.2E-06 55.0 5.7 43 85-128 1-43 (268)
152 TIGR02195 heptsyl_trn_II lipop 93.3 0.96 2.1E-05 47.5 12.3 112 388-507 161-276 (334)
153 PF10087 DUF2325: Uncharacteri 92.7 0.28 6E-06 41.7 5.7 80 435-515 2-89 (97)
154 PLN02448 UDP-glycosyltransfera 92.6 2.3 4.9E-05 47.0 14.4 134 403-553 275-415 (459)
155 PLN02670 transferase, transfer 92.5 2.6 5.5E-05 46.7 14.4 170 403-587 279-466 (472)
156 PLN02562 UDP-glycosyltransfera 92.5 2 4.4E-05 47.2 13.6 128 404-553 275-413 (448)
157 PF12038 DUF3524: Domain of un 92.1 0.61 1.3E-05 43.4 7.4 35 85-127 1-35 (168)
158 PF06925 MGDG_synth: Monogalac 92.0 0.8 1.7E-05 43.1 8.5 27 315-344 135-161 (169)
159 PF01075 Glyco_transf_9: Glyco 90.6 2.3 5E-05 42.3 10.8 102 402-508 105-209 (247)
160 cd03789 GT1_LPS_heptosyltransf 90.3 1.9 4E-05 44.0 10.0 98 405-509 124-225 (279)
161 PRK10422 lipopolysaccharide co 90.2 3.7 8.1E-05 43.4 12.5 101 403-508 184-288 (352)
162 PF04101 Glyco_tran_28_C: Glyc 89.8 0.081 1.8E-06 49.6 -0.6 91 459-565 56-154 (167)
163 TIGR02201 heptsyl_trn_III lipo 89.1 6.4 0.00014 41.5 13.3 99 404-507 183-285 (344)
164 TIGR02193 heptsyl_trn_I lipopo 88.9 11 0.00023 39.2 14.7 98 404-508 181-280 (319)
165 PLN02410 UDP-glucoronosyl/UDP- 88.8 6.4 0.00014 43.3 13.3 134 403-554 265-411 (451)
166 PF00201 UDPGT: UDP-glucoronos 88.2 2.2 4.7E-05 47.5 9.3 126 402-553 276-409 (500)
167 COG0859 RfaF ADP-heptose:LPS h 87.9 11 0.00023 39.8 13.9 98 404-508 177-277 (334)
168 PLN03004 UDP-glycosyltransfera 87.8 7.1 0.00015 43.0 12.7 137 403-553 271-424 (451)
169 TIGR03609 S_layer_CsaB polysac 87.7 22 0.00047 36.6 15.9 100 404-508 173-276 (298)
170 PLN02210 UDP-glucosyl transfer 87.5 9.1 0.0002 42.2 13.5 138 403-553 270-415 (456)
171 PLN03007 UDP-glucosyltransfera 86.8 8.4 0.00018 42.8 12.8 137 403-553 286-440 (482)
172 PLN00164 glucosyltransferase; 86.3 19 0.00042 39.9 15.4 75 473-553 351-431 (480)
173 PRK10916 ADP-heptose:LPS hepto 86.2 7.3 0.00016 41.1 11.6 109 391-507 170-286 (348)
174 PLN02173 UDP-glucosyl transfer 85.6 11 0.00025 41.3 12.9 137 404-553 266-408 (449)
175 PLN02167 UDP-glycosyltransfera 85.3 13 0.00027 41.3 13.2 140 403-553 281-434 (475)
176 PLN02863 UDP-glucoronosyl/UDP- 85.2 12 0.00025 41.6 12.8 135 403-552 284-432 (477)
177 PF01975 SurE: Survival protei 85.1 0.92 2E-05 43.9 3.7 39 85-130 1-39 (196)
178 PLN02208 glycosyltransferase f 84.4 24 0.00053 38.7 14.8 84 460-554 313-402 (442)
179 PLN02207 UDP-glycosyltransfera 84.3 21 0.00045 39.5 14.2 139 403-552 276-425 (468)
180 PLN02152 indole-3-acetate beta 84.0 18 0.00039 39.8 13.5 137 403-553 262-417 (455)
181 KOG0780 Signal recognition par 82.8 24 0.00052 37.5 12.9 165 405-585 156-341 (483)
182 PF10093 DUF2331: Uncharacteri 82.3 74 0.0016 33.9 16.9 115 386-509 166-290 (374)
183 PF02951 GSH-S_N: Prokaryotic 82.1 1.6 3.6E-05 38.5 3.7 40 85-127 1-40 (119)
184 PLN02554 UDP-glycosyltransfera 81.4 26 0.00056 38.9 13.7 140 404-552 276-439 (481)
185 PLN02992 coniferyl-alcohol glu 81.4 27 0.00058 38.8 13.7 82 460-553 340-427 (481)
186 PF05159 Capsule_synth: Capsul 80.8 6.1 0.00013 40.1 8.0 100 401-509 115-226 (269)
187 PRK10964 ADP-heptose:LPS hepto 80.6 13 0.00027 38.8 10.5 98 404-508 180-279 (322)
188 PLN02764 glycosyltransferase f 80.4 42 0.00091 37.0 14.7 73 474-553 330-407 (453)
189 PLN02555 limonoid glucosyltran 80.1 19 0.00041 40.0 12.0 137 404-553 279-429 (480)
190 KOG2884 26S proteasome regulat 76.0 31 0.00068 33.5 10.3 119 403-553 108-229 (259)
191 PF03033 Glyco_transf_28: Glyc 75.9 3.7 8.1E-05 36.7 4.2 28 100-127 8-35 (139)
192 PF01113 DapB_N: Dihydrodipico 74.9 4.4 9.6E-05 36.0 4.3 45 470-514 60-104 (124)
193 PLN00414 glycosyltransferase f 74.4 86 0.0019 34.5 15.0 72 474-553 325-402 (446)
194 PF08660 Alg14: Oligosaccharid 72.6 31 0.00068 32.5 9.7 71 228-333 92-162 (170)
195 PRK00207 sulfur transfer compl 71.6 6.7 0.00014 35.2 4.6 40 85-127 1-41 (128)
196 PRK06249 2-dehydropantoate 2-r 71.2 5.3 0.00011 41.6 4.5 36 81-127 2-37 (313)
197 PF04413 Glycos_transf_N: 3-De 69.5 30 0.00065 33.1 9.0 39 309-356 141-179 (186)
198 KOG1021 Acetylglucosaminyltran 68.1 39 0.00086 37.3 10.7 93 470-575 336-434 (464)
199 COG2910 Putative NADH-flavin r 67.8 7.3 0.00016 37.1 4.1 33 85-127 1-33 (211)
200 PF08288 PIGA: PIGA (GPI ancho 64.5 31 0.00067 28.7 6.6 36 228-269 50-85 (90)
201 PF03016 Exostosin: Exostosin 63.9 23 0.00049 36.3 7.5 68 471-548 230-300 (302)
202 PLN00016 RNA-binding protein; 63.3 7.5 0.00016 41.6 3.9 38 84-127 52-89 (378)
203 PF12996 DUF3880: DUF based on 60.7 21 0.00045 28.9 5.1 44 313-367 14-57 (79)
204 PLN02572 UDP-sulfoquinovose sy 60.1 13 0.00028 40.8 5.1 34 82-125 45-78 (442)
205 PRK05866 short chain dehydroge 58.8 17 0.00036 37.4 5.4 42 76-127 32-73 (293)
206 PF03358 FMN_red: NADPH-depend 58.0 17 0.00036 33.1 4.7 40 85-127 1-40 (152)
207 KOG1192 UDP-glucuronosyl and U 56.8 1.8E+02 0.0038 32.1 13.5 129 404-553 279-422 (496)
208 PRK08305 spoVFB dipicolinate s 56.4 20 0.00043 34.6 5.0 38 82-127 3-42 (196)
209 PRK13932 stationary phase surv 55.9 12 0.00025 37.8 3.5 40 83-130 4-43 (257)
210 PF03808 Glyco_tran_WecB: Glyc 54.3 82 0.0018 29.6 8.8 99 415-517 31-141 (172)
211 PF15024 Glyco_transf_18: Glyc 53.4 1.1E+02 0.0024 34.3 10.7 159 404-585 278-454 (559)
212 PRK10037 cell division protein 53.3 14 0.00031 36.9 3.7 36 85-126 1-38 (250)
213 TIGR01007 eps_fam capsular exo 53.0 22 0.00048 34.2 4.9 41 83-127 15-55 (204)
214 cd03146 GAT1_Peptidase_E Type 52.4 1.7E+02 0.0038 28.4 11.1 106 406-511 3-124 (212)
215 TIGR00696 wecB_tagA_cpsF bacte 51.8 76 0.0016 30.1 8.1 98 417-517 33-140 (177)
216 COG0541 Ffh Signal recognition 51.6 3.6E+02 0.0078 29.5 14.8 165 408-585 158-341 (451)
217 KOG4626 O-linked N-acetylgluco 50.9 85 0.0019 35.5 9.1 181 391-590 749-944 (966)
218 PRK09739 hypothetical protein; 50.4 30 0.00066 33.3 5.4 43 82-127 1-43 (199)
219 KOG2099 Glycogen phosphorylase 50.4 15 0.00032 40.6 3.4 146 382-527 538-715 (843)
220 PRK05708 2-dehydropantoate 2-r 50.4 18 0.0004 37.4 4.1 33 84-127 2-34 (305)
221 cd06533 Glyco_transf_WecG_TagA 49.7 1.4E+02 0.0031 27.9 9.7 99 414-516 28-138 (171)
222 PF02374 ArsA_ATPase: Anion-tr 49.4 17 0.00036 37.8 3.5 76 85-177 1-79 (305)
223 TIGR00087 surE 5'/3'-nucleotid 48.8 18 0.0004 36.2 3.6 38 85-130 1-38 (244)
224 PRK13234 nifH nitrogenase redu 48.5 22 0.00047 36.7 4.3 38 82-126 1-40 (295)
225 COG4635 HemG Flavodoxin [Energ 48.2 25 0.00055 32.6 4.0 38 85-127 1-38 (175)
226 PLN03015 UDP-glucosyl transfer 47.3 3.6E+02 0.0078 29.9 13.6 72 474-552 348-425 (470)
227 PRK09271 flavodoxin; Provision 46.7 32 0.0007 31.9 4.7 36 85-125 1-36 (160)
228 TIGR01380 glut_syn glutathione 46.3 18 0.00039 37.7 3.2 40 85-127 1-40 (312)
229 PLN02534 UDP-glycosyltransfera 46.2 4.6E+02 0.01 29.2 15.0 39 84-128 8-46 (491)
230 PRK05653 fabG 3-ketoacyl-(acyl 45.8 27 0.00058 34.0 4.3 35 83-127 4-38 (246)
231 COG0300 DltE Short-chain dehyd 45.6 30 0.00065 35.1 4.5 27 100-129 15-41 (265)
232 PRK12827 short chain dehydroge 44.8 27 0.00059 34.2 4.2 35 82-126 4-38 (249)
233 PRK08229 2-dehydropantoate 2-r 44.7 24 0.00052 37.0 3.9 33 84-127 2-34 (341)
234 PRK14619 NAD(P)H-dependent gly 44.4 28 0.0006 36.1 4.3 34 83-127 3-36 (308)
235 PRK06756 flavodoxin; Provision 43.7 37 0.00081 30.8 4.6 37 85-126 2-38 (148)
236 PLN02240 UDP-glucose 4-epimera 43.5 29 0.00062 36.3 4.3 35 81-125 2-36 (352)
237 PRK12825 fabG 3-ketoacyl-(acyl 43.4 30 0.00065 33.7 4.2 35 83-127 5-39 (249)
238 TIGR01915 npdG NADPH-dependent 43.1 27 0.00059 34.2 3.8 33 85-127 1-33 (219)
239 PF06564 YhjQ: YhjQ protein; 42.9 35 0.00075 34.2 4.5 39 85-127 1-39 (243)
240 PRK13933 stationary phase surv 42.5 24 0.00053 35.5 3.4 38 85-130 1-38 (253)
241 PRK13935 stationary phase surv 42.2 24 0.00053 35.5 3.3 38 85-130 1-38 (253)
242 PRK12921 2-dehydropantoate 2-r 41.9 26 0.00057 35.9 3.7 31 85-126 1-31 (305)
243 PRK01372 ddl D-alanine--D-alan 41.9 40 0.00086 34.7 5.0 44 82-127 2-45 (304)
244 COG0496 SurE Predicted acid ph 41.7 25 0.00055 35.3 3.3 38 85-130 1-38 (252)
245 PRK03692 putative UDP-N-acetyl 40.9 1.1E+02 0.0024 30.7 7.7 97 417-516 90-196 (243)
246 PRK07454 short chain dehydroge 40.5 34 0.00074 33.5 4.1 37 82-127 3-39 (241)
247 PLN02695 GDP-D-mannose-3',5'-e 40.1 38 0.00082 36.1 4.6 36 82-127 19-54 (370)
248 PRK06522 2-dehydropantoate 2-r 39.8 33 0.00071 35.2 4.0 32 85-127 1-32 (304)
249 PRK13849 putative crown gall t 38.8 37 0.0008 33.7 4.0 37 85-127 1-39 (231)
250 TIGR00959 ffh signal recogniti 38.6 5.5E+02 0.012 28.1 13.3 83 490-585 255-341 (428)
251 COG4088 Predicted nucleotide k 38.6 25 0.00055 34.2 2.6 39 85-128 1-39 (261)
252 TIGR00670 asp_carb_tr aspartat 38.5 2.6E+02 0.0057 28.9 10.3 106 354-486 120-225 (301)
253 PF09949 DUF2183: Uncharacteri 38.4 93 0.002 26.5 5.8 42 420-463 54-95 (100)
254 PRK05920 aromatic acid decarbo 38.4 54 0.0012 31.9 4.9 38 83-127 2-39 (204)
255 PLN02778 3,5-epimerase/4-reduc 38.0 35 0.00075 35.2 3.8 33 82-124 7-39 (298)
256 PRK13398 3-deoxy-7-phosphohept 38.0 4.2E+02 0.0091 26.9 11.5 101 407-509 29-142 (266)
257 PRK06180 short chain dehydroge 37.9 44 0.00095 33.7 4.5 25 100-127 13-37 (277)
258 PRK05718 keto-hydroxyglutarate 37.8 2.4E+02 0.0053 27.5 9.4 72 415-486 23-96 (212)
259 PRK10481 hypothetical protein; 37.8 3.3E+02 0.0072 26.9 10.3 126 378-509 66-214 (224)
260 COG0111 SerA Phosphoglycerate 37.7 1E+02 0.0022 32.3 7.3 81 432-514 142-239 (324)
261 CHL00175 minD septum-site dete 37.6 56 0.0012 33.2 5.3 47 76-126 6-52 (281)
262 COG1090 Predicted nucleoside-d 37.5 24 0.00053 35.8 2.4 31 99-129 3-33 (297)
263 PF04321 RmlD_sub_bind: RmlD s 37.5 47 0.001 34.0 4.7 30 85-124 1-30 (286)
264 CHL00194 ycf39 Ycf39; Provisio 37.3 38 0.00083 35.0 4.0 33 85-127 1-33 (317)
265 PRK00346 surE 5'(3')-nucleotid 37.3 34 0.00074 34.4 3.5 38 85-130 1-38 (250)
266 PRK05993 short chain dehydroge 37.3 45 0.00098 33.6 4.5 34 85-127 4-37 (277)
267 PLN02927 antheraxanthin epoxid 37.2 41 0.00089 38.9 4.5 34 82-126 79-112 (668)
268 PF04230 PS_pyruv_trans: Polys 37.1 4E+02 0.0086 25.8 13.0 91 414-509 188-284 (286)
269 PRK13934 stationary phase surv 37.1 33 0.00073 34.8 3.3 38 85-130 1-38 (266)
270 PRK10427 putative PTS system f 37.1 62 0.0014 28.3 4.6 39 84-127 2-42 (114)
271 PRK05246 glutathione synthetas 37.0 29 0.00063 36.1 3.1 41 84-127 1-41 (316)
272 PF01081 Aldolase: KDPG and KH 37.0 2.6E+02 0.0057 27.0 9.3 68 419-486 20-89 (196)
273 COG1553 DsrE Uncharacterized c 36.8 67 0.0014 28.5 4.7 40 85-127 1-41 (126)
274 COG1763 MobB Molybdopterin-gua 36.7 54 0.0012 30.6 4.5 39 84-127 1-39 (161)
275 CHL00072 chlL photochlorophyll 36.7 44 0.00095 34.4 4.3 35 85-127 1-37 (290)
276 PLN00141 Tic62-NAD(P)-related 36.3 43 0.00093 33.3 4.1 34 84-127 17-50 (251)
277 cd00027 BRCT Breast Cancer Sup 36.3 1E+02 0.0022 22.7 5.5 64 433-508 2-65 (72)
278 PRK10538 malonic semialdehyde 35.9 44 0.00096 32.9 4.1 33 85-127 1-33 (248)
279 PRK10675 UDP-galactose-4-epime 35.3 41 0.00089 34.9 3.9 31 85-125 1-31 (338)
280 PRK05693 short chain dehydroge 35.1 47 0.001 33.3 4.2 34 85-127 1-34 (274)
281 TIGR01425 SRP54_euk signal rec 35.1 6.4E+02 0.014 27.6 13.2 154 419-585 169-341 (429)
282 PF02525 Flavodoxin_2: Flavodo 35.0 50 0.0011 31.6 4.2 39 85-126 1-41 (199)
283 PF04392 ABC_sub_bind: ABC tra 35.0 4.8E+02 0.011 26.5 11.8 101 416-521 115-227 (294)
284 PF00201 UDPGT: UDP-glucoronos 34.9 12 0.00025 41.7 -0.4 28 101-128 10-37 (500)
285 PRK05557 fabG 3-ketoacyl-(acyl 34.9 52 0.0011 32.0 4.4 36 82-127 3-38 (248)
286 PRK07577 short chain dehydroge 34.7 53 0.0012 31.8 4.4 35 83-127 2-36 (234)
287 PRK06179 short chain dehydroge 34.3 55 0.0012 32.7 4.6 25 100-127 13-37 (270)
288 PRK06732 phosphopantothenate-- 34.3 48 0.001 32.8 4.0 25 100-127 25-49 (229)
289 TIGR01754 flav_RNR ribonucleot 33.9 59 0.0013 29.2 4.2 34 85-123 1-34 (140)
290 COG1192 Soj ATPases involved i 33.9 51 0.0011 32.9 4.2 37 85-127 2-41 (259)
291 PRK06015 keto-hydroxyglutarate 33.7 3.4E+02 0.0074 26.3 9.6 89 417-505 14-121 (201)
292 TIGR02622 CDP_4_6_dhtase CDP-g 33.7 49 0.0011 34.7 4.2 34 83-126 3-36 (349)
293 KOG1209 1-Acyl dihydroxyaceton 33.1 61 0.0013 31.8 4.2 35 84-127 7-41 (289)
294 PLN00198 anthocyanidin reducta 33.0 53 0.0012 34.2 4.3 37 81-127 6-42 (338)
295 PF02441 Flavoprotein: Flavopr 32.9 49 0.0011 29.4 3.5 36 85-127 1-36 (129)
296 PF02635 DrsE: DsrE/DsrF-like 32.8 93 0.002 26.5 5.2 40 85-127 1-43 (122)
297 PRK11104 hemG protoporphyrinog 32.8 53 0.0011 31.1 3.8 36 85-126 1-36 (177)
298 PRK00048 dihydrodipicolinate r 32.2 1.2E+02 0.0027 30.4 6.7 42 472-513 55-96 (257)
299 PLN02166 dTDP-glucose 4,6-dehy 32.2 45 0.00097 36.5 3.7 34 83-126 119-152 (436)
300 PRK13931 stationary phase surv 32.2 54 0.0012 33.2 4.0 39 85-130 1-42 (261)
301 PRK07023 short chain dehydroge 32.2 58 0.0013 31.9 4.3 33 85-127 2-34 (243)
302 PRK06924 short chain dehydroge 32.1 56 0.0012 32.1 4.1 25 100-127 10-34 (251)
303 PF12683 DUF3798: Protein of u 32.0 2.7E+02 0.006 28.2 8.7 110 388-504 22-133 (275)
304 PRK06182 short chain dehydroge 31.7 62 0.0013 32.4 4.4 25 100-127 12-36 (273)
305 PRK10840 transcriptional regul 31.4 4.6E+02 0.01 24.9 12.4 110 432-553 3-126 (216)
306 COG0702 Predicted nucleoside-d 31.2 61 0.0013 32.2 4.3 30 101-130 7-36 (275)
307 PLN02712 arogenate dehydrogena 30.9 83 0.0018 36.5 5.7 35 82-127 50-84 (667)
308 TIGR01182 eda Entner-Doudoroff 30.8 4.2E+02 0.0091 25.7 9.7 70 417-486 18-89 (204)
309 PF02826 2-Hacid_dh_C: D-isome 30.7 2.6E+02 0.0056 26.2 8.2 81 432-514 36-133 (178)
310 COG0716 FldA Flavodoxins [Ener 30.6 71 0.0015 29.2 4.2 36 85-125 2-37 (151)
311 PRK07308 flavodoxin; Validated 30.5 69 0.0015 29.0 4.1 27 100-126 12-38 (146)
312 PRK08340 glucose-1-dehydrogena 30.4 59 0.0013 32.3 4.0 33 85-127 1-33 (259)
313 PRK12826 3-ketoacyl-(acyl-carr 30.4 63 0.0014 31.6 4.2 35 83-127 5-39 (251)
314 PRK02102 ornithine carbamoyltr 30.4 5.8E+02 0.013 26.8 11.4 103 354-485 126-232 (331)
315 COG0003 ArsA Predicted ATPase 30.4 66 0.0014 33.7 4.3 76 84-178 1-79 (322)
316 PRK05884 short chain dehydroge 30.3 67 0.0015 31.2 4.3 33 85-127 1-33 (223)
317 PRK08883 ribulose-phosphate 3- 30.2 4.1E+02 0.0089 26.1 9.7 124 416-551 68-215 (220)
318 PRK06849 hypothetical protein; 30.1 62 0.0013 34.7 4.3 36 82-127 2-37 (389)
319 cd02032 Bchl_like This family 29.8 68 0.0015 32.3 4.3 37 85-127 1-37 (267)
320 PRK07236 hypothetical protein; 29.5 48 0.001 35.4 3.3 34 82-126 4-37 (386)
321 TIGR03012 sulf_tusD_dsrE sulfu 29.5 90 0.002 27.8 4.5 39 86-127 1-40 (127)
322 PRK06101 short chain dehydroge 29.4 69 0.0015 31.4 4.3 34 85-127 1-34 (240)
323 PRK13232 nifH nitrogenase redu 29.3 53 0.0011 33.3 3.4 27 100-126 9-37 (273)
324 PLN03007 UDP-glucosyltransfera 29.2 72 0.0016 35.4 4.7 39 83-127 4-42 (482)
325 PRK14618 NAD(P)H-dependent gly 29.2 68 0.0015 33.5 4.3 33 84-127 4-36 (328)
326 PRK08703 short chain dehydroge 29.1 79 0.0017 30.8 4.6 25 100-127 15-39 (239)
327 PLN02657 3,8-divinyl protochlo 29.1 86 0.0019 33.7 5.2 36 82-127 58-93 (390)
328 PRK07231 fabG 3-ketoacyl-(acyl 29.0 72 0.0016 31.2 4.3 35 83-127 4-38 (251)
329 PRK07806 short chain dehydroge 29.0 75 0.0016 31.1 4.4 33 84-126 6-38 (248)
330 PRK14620 NAD(P)H-dependent gly 28.8 63 0.0014 33.7 4.0 32 85-127 1-32 (326)
331 COG0512 PabA Anthranilate/para 28.8 64 0.0014 30.9 3.6 34 84-127 1-34 (191)
332 TIGR01281 DPOR_bchL light-inde 28.4 75 0.0016 32.0 4.4 34 85-126 1-36 (268)
333 TIGR00036 dapB dihydrodipicoli 28.3 1.5E+02 0.0032 30.1 6.4 37 475-511 66-102 (266)
334 PRK08177 short chain dehydroge 28.2 74 0.0016 30.8 4.2 34 85-127 1-34 (225)
335 PRK11891 aspartate carbamoyltr 28.2 4.5E+02 0.0098 28.7 10.4 135 315-486 180-317 (429)
336 PRK00124 hypothetical protein; 28.1 1.4E+02 0.0031 27.5 5.6 84 435-519 3-86 (151)
337 PF03721 UDPG_MGDP_dh_N: UDP-g 28.1 66 0.0014 30.7 3.6 32 85-127 1-32 (185)
338 PRK14494 putative molybdopteri 27.9 89 0.0019 31.0 4.6 38 85-127 1-38 (229)
339 TIGR01968 minD_bact septum sit 27.9 66 0.0014 31.9 3.8 25 102-126 14-38 (261)
340 COG0569 TrkA K+ transport syst 27.8 40 0.00088 33.3 2.2 26 102-127 7-32 (225)
341 PLN02206 UDP-glucuronate decar 27.7 61 0.0013 35.6 3.7 33 83-125 118-150 (442)
342 cd02040 NifH NifH gene encodes 27.4 89 0.0019 31.3 4.7 26 102-127 13-38 (270)
343 TIGR03371 cellulose_yhjQ cellu 27.3 86 0.0019 30.8 4.5 39 85-127 1-39 (246)
344 PF10649 DUF2478: Protein of u 27.3 1.1E+02 0.0025 28.4 4.9 37 473-509 89-131 (159)
345 PF00185 OTCace: Aspartate/orn 27.3 68 0.0015 29.7 3.5 37 83-128 1-37 (158)
346 PRK06703 flavodoxin; Provision 27.3 96 0.0021 28.1 4.5 38 85-127 2-39 (151)
347 COG2327 WcaK Polysaccharide py 26.9 8.2E+02 0.018 26.3 29.4 72 469-553 277-350 (385)
348 PRK04155 chaperone protein Hch 26.9 1.5E+02 0.0032 30.6 6.1 46 82-127 47-99 (287)
349 TIGR00288 conserved hypothetic 26.8 2.3E+02 0.0049 26.5 6.7 67 415-485 88-156 (160)
350 PRK09072 short chain dehydroge 26.8 87 0.0019 31.1 4.5 25 100-127 14-38 (263)
351 PRK12829 short chain dehydroge 26.7 83 0.0018 31.1 4.3 35 82-126 9-43 (264)
352 PRK06057 short chain dehydroge 26.6 83 0.0018 31.1 4.3 36 82-127 5-40 (255)
353 PRK10360 DNA-binding transcrip 26.6 5E+02 0.011 23.7 11.8 108 434-553 3-118 (196)
354 PRK00094 gpsA NAD(P)H-dependen 26.6 72 0.0016 33.0 3.9 32 85-127 2-33 (325)
355 PRK12746 short chain dehydroge 26.6 83 0.0018 30.9 4.3 25 100-127 15-39 (254)
356 PRK13235 nifH nitrogenase redu 26.5 70 0.0015 32.4 3.8 28 100-127 9-38 (274)
357 TIGR03018 pepcterm_TyrKin exop 26.5 1.1E+02 0.0024 29.4 5.0 40 84-127 34-74 (207)
358 PRK11064 wecC UDP-N-acetyl-D-m 26.5 71 0.0015 34.7 4.0 35 82-127 1-35 (415)
359 PRK07825 short chain dehydroge 26.5 87 0.0019 31.3 4.5 35 83-127 4-38 (273)
360 PRK06444 prephenate dehydrogen 26.4 78 0.0017 30.6 3.8 28 85-122 1-28 (197)
361 cd03129 GAT1_Peptidase_E_like 26.2 5.9E+02 0.013 24.4 12.1 100 414-513 11-126 (210)
362 PRK07024 short chain dehydroge 26.2 86 0.0019 31.0 4.3 25 100-127 11-35 (257)
363 cd02071 MM_CoA_mut_B12_BD meth 26.2 3.3E+02 0.0071 23.8 7.5 15 347-361 24-38 (122)
364 COG2204 AtoC Response regulato 26.1 9.2E+02 0.02 26.7 12.8 107 434-553 6-122 (464)
365 PRK13671 hypothetical protein; 26.1 2.4E+02 0.0053 29.1 7.5 36 405-440 2-39 (298)
366 TIGR03466 HpnA hopanoid-associ 26.1 76 0.0017 32.5 4.1 33 85-127 1-33 (328)
367 PF13460 NAD_binding_10: NADH( 26.0 52 0.0011 30.6 2.5 28 100-127 4-31 (183)
368 PRK12939 short chain dehydroge 26.0 88 0.0019 30.5 4.3 35 83-127 6-40 (250)
369 PLN02253 xanthoxin dehydrogena 25.9 1E+02 0.0022 31.0 4.8 25 100-127 27-51 (280)
370 KOG1429 dTDP-glucose 4-6-dehyd 25.8 99 0.0021 31.8 4.4 38 80-127 23-60 (350)
371 PRK07417 arogenate dehydrogena 25.7 85 0.0019 31.9 4.2 32 85-127 1-32 (279)
372 TIGR03029 EpsG chain length de 25.7 1.2E+02 0.0026 30.6 5.3 40 83-126 101-140 (274)
373 PRK07890 short chain dehydroge 25.7 89 0.0019 30.7 4.3 35 83-127 4-38 (258)
374 PRK02255 putrescine carbamoylt 25.4 7.2E+02 0.016 26.2 11.1 88 389-486 140-231 (338)
375 PLN02527 aspartate carbamoyltr 25.4 6.3E+02 0.014 26.2 10.6 107 354-486 121-227 (306)
376 TIGR03837 efp_adjacent_2 conse 25.3 5.5E+02 0.012 27.4 10.0 115 386-508 165-287 (371)
377 PLN02208 glycosyltransferase f 25.1 1.1E+02 0.0023 33.7 5.0 39 83-127 3-41 (442)
378 PRK00211 sulfur relay protein 25.0 1.1E+02 0.0024 26.9 4.2 39 85-127 2-41 (119)
379 PRK08410 2-hydroxyacid dehydro 24.9 2.6E+02 0.0057 29.0 7.7 45 470-514 189-238 (311)
380 PRK06932 glycerate dehydrogena 24.8 2.8E+02 0.0061 28.8 7.9 44 471-514 191-239 (314)
381 PRK04148 hypothetical protein; 24.8 98 0.0021 28.0 3.8 32 84-127 17-48 (134)
382 PRK06523 short chain dehydroge 24.8 93 0.002 30.7 4.3 34 84-127 9-42 (260)
383 PRK07326 short chain dehydroge 24.7 96 0.0021 30.1 4.3 33 84-126 6-38 (237)
384 PRK05723 flavodoxin; Provision 24.7 1E+02 0.0022 28.3 4.1 36 85-125 1-36 (151)
385 COG2085 Predicted dinucleotide 24.6 52 0.0011 32.1 2.2 27 101-127 7-33 (211)
386 PRK09135 pteridine reductase; 24.6 95 0.0021 30.2 4.3 25 100-127 15-39 (249)
387 PRK06914 short chain dehydroge 24.6 97 0.0021 31.1 4.4 25 100-127 12-36 (280)
388 PRK10446 ribosomal protein S6 24.5 84 0.0018 32.3 3.9 35 85-127 1-35 (300)
389 PLN02896 cinnamyl-alcohol dehy 24.5 91 0.002 32.7 4.3 34 83-126 9-42 (353)
390 PRK09186 flagellin modificatio 24.5 96 0.0021 30.5 4.3 25 100-127 13-37 (256)
391 PRK13230 nitrogenase reductase 24.5 82 0.0018 31.9 3.8 28 100-127 9-38 (279)
392 PRK09730 putative NAD(P)-bindi 24.2 78 0.0017 30.8 3.5 34 85-127 1-34 (247)
393 PLN02256 arogenate dehydrogena 24.1 1E+02 0.0023 31.9 4.5 36 81-127 33-68 (304)
394 PRK08267 short chain dehydroge 24.1 96 0.0021 30.7 4.2 25 100-127 10-34 (260)
395 PRK05854 short chain dehydroge 24.1 1.2E+02 0.0027 31.2 5.1 34 85-127 14-47 (313)
396 PF00185 OTCace: Aspartate/orn 24.0 3.6E+02 0.0077 24.9 7.7 75 404-487 3-83 (158)
397 PF00389 2-Hacid_dh: D-isomer 24.0 4.9E+02 0.011 22.8 8.7 54 459-514 20-73 (133)
398 cd01425 RPS2 Ribosomal protein 23.9 3.1E+02 0.0068 26.2 7.5 31 476-507 126-156 (193)
399 PRK06953 short chain dehydroge 23.9 1E+02 0.0022 29.8 4.2 34 85-127 1-34 (222)
400 PRK14569 D-alanyl-alanine synt 23.8 1.2E+02 0.0026 31.2 4.9 43 82-126 1-43 (296)
401 KOG1192 UDP-glucuronosyl and U 23.8 95 0.0021 34.2 4.5 30 100-129 15-44 (496)
402 PF01408 GFO_IDH_MocA: Oxidore 23.7 3.6E+02 0.0079 22.8 7.4 76 422-508 16-93 (120)
403 PRK13869 plasmid-partitioning 23.7 1.1E+02 0.0024 33.1 4.8 38 83-126 119-158 (405)
404 PRK06701 short chain dehydroge 23.6 1E+02 0.0022 31.4 4.4 36 82-127 44-79 (290)
405 PRK07102 short chain dehydroge 23.6 98 0.0021 30.3 4.1 25 100-127 10-34 (243)
406 PF11071 DUF2872: Protein of u 23.5 2.8E+02 0.0061 24.9 6.2 68 473-551 68-140 (141)
407 PRK08105 flavodoxin; Provision 23.5 1.1E+02 0.0023 28.1 4.0 28 99-126 11-38 (149)
408 PRK07060 short chain dehydroge 23.3 1.1E+02 0.0023 29.9 4.3 36 82-127 7-42 (245)
409 PRK08063 enoyl-(acyl carrier p 23.1 1E+02 0.0022 30.2 4.1 25 100-127 13-37 (250)
410 TIGR03453 partition_RepA plasm 23.1 1.2E+02 0.0026 32.6 4.9 40 82-127 101-142 (387)
411 PF10727 Rossmann-like: Rossma 23.0 47 0.001 29.7 1.4 35 82-127 8-42 (127)
412 PRK08265 short chain dehydroge 22.9 1.1E+02 0.0025 30.3 4.5 25 100-127 15-39 (261)
413 KOG3349 Predicted glycosyltran 22.8 2.6E+02 0.0057 25.9 6.1 94 404-507 5-106 (170)
414 PRK06197 short chain dehydroge 22.6 1.3E+02 0.0028 30.7 5.0 25 100-127 25-49 (306)
415 PRK06194 hypothetical protein; 22.6 1.1E+02 0.0024 30.7 4.4 24 100-126 15-38 (287)
416 PLN02653 GDP-mannose 4,6-dehyd 22.5 96 0.0021 32.3 4.0 34 84-127 6-39 (340)
417 TIGR00715 precor6x_red precorr 22.5 1.2E+02 0.0026 30.6 4.5 121 404-551 131-255 (256)
418 PLN02989 cinnamyl-alcohol dehy 22.4 1.1E+02 0.0024 31.5 4.4 24 101-127 15-38 (325)
419 PRK05875 short chain dehydroge 22.4 1.1E+02 0.0024 30.6 4.3 36 82-127 5-40 (276)
420 COG4007 Predicted dehydrogenas 22.4 52 0.0011 33.1 1.7 34 100-138 31-65 (340)
421 PRK06398 aldose dehydrogenase; 22.3 1.2E+02 0.0026 30.1 4.5 24 100-126 15-38 (258)
422 cd01080 NAD_bind_m-THF_DH_Cycl 22.2 5.3E+02 0.011 24.1 8.5 66 419-487 29-97 (168)
423 TIGR00041 DTMP_kinase thymidyl 22.2 1.4E+02 0.0031 28.1 4.8 38 83-126 2-39 (195)
424 PRK06753 hypothetical protein; 22.2 74 0.0016 33.6 3.1 32 85-127 1-32 (373)
425 PRK13243 glyoxylate reductase; 22.1 3E+02 0.0064 28.9 7.5 44 471-514 198-246 (333)
426 PF00852 Glyco_transf_10: Glyc 22.0 1.3E+02 0.0027 32.0 4.7 76 473-560 223-303 (349)
427 PRK13396 3-deoxy-7-phosphohept 21.9 8.7E+02 0.019 25.8 10.8 102 404-509 101-216 (352)
428 PRK01713 ornithine carbamoyltr 21.8 9.4E+02 0.02 25.3 11.2 86 389-485 144-233 (334)
429 PRK13185 chlL protochlorophyll 21.8 1.4E+02 0.003 30.0 4.8 25 102-126 14-38 (270)
430 PRK13397 3-deoxy-7-phosphohept 21.7 8.3E+02 0.018 24.6 10.2 91 417-509 27-130 (250)
431 TIGR01426 MGT glycosyltransfer 21.7 63 0.0014 34.5 2.4 21 107-127 12-32 (392)
432 PRK15438 erythronate-4-phospha 21.5 2.3E+02 0.0049 30.5 6.5 44 471-514 161-213 (378)
433 PRK06719 precorrin-2 dehydroge 21.5 64 0.0014 29.9 2.1 35 83-128 12-46 (157)
434 TIGR03010 sulf_tusC_dsrF sulfu 21.5 1.4E+02 0.003 26.0 4.1 38 86-127 1-39 (116)
435 KOG2452 Formyltetrahydrofolate 21.4 1.2E+02 0.0026 32.9 4.2 32 85-127 1-32 (881)
436 PRK15181 Vi polysaccharide bio 21.4 1E+02 0.0022 32.4 3.9 36 82-127 13-48 (348)
437 PF13614 AAA_31: AAA domain; P 21.4 1.7E+02 0.0036 26.3 4.9 28 100-127 11-38 (157)
438 PF05686 Glyco_transf_90: Glyc 21.4 3.7E+02 0.0079 29.0 8.2 84 493-588 229-319 (395)
439 TIGR00658 orni_carb_tr ornithi 21.4 9.2E+02 0.02 24.9 11.2 84 389-485 137-224 (304)
440 PRK07453 protochlorophyllide o 21.3 1.3E+02 0.0028 31.0 4.7 34 85-127 6-39 (322)
441 PRK08163 salicylate hydroxylas 21.3 88 0.0019 33.3 3.5 33 83-126 3-35 (396)
442 PRK10569 NAD(P)H-dependent FMN 21.3 1.6E+02 0.0035 28.2 4.9 40 85-127 1-40 (191)
443 PRK06196 oxidoreductase; Provi 21.2 1.2E+02 0.0026 31.2 4.4 25 100-127 35-59 (315)
444 PRK13982 bifunctional SbtC-lik 21.1 2.3E+02 0.0049 31.5 6.6 38 82-127 68-106 (475)
445 COG2084 MmsB 3-hydroxyisobutyr 21.1 1E+02 0.0022 31.7 3.6 32 85-127 1-32 (286)
446 COG0052 RpsB Ribosomal protein 21.1 8.5E+02 0.019 24.5 10.5 157 354-516 14-195 (252)
447 PRK07856 short chain dehydroge 21.0 1.3E+02 0.0028 29.6 4.4 25 100-127 15-39 (252)
448 TIGR00639 PurN phosphoribosylg 20.9 3.6E+02 0.0077 25.8 7.2 34 85-127 1-36 (190)
449 PRK08263 short chain dehydroge 20.8 1.3E+02 0.0028 30.1 4.4 25 100-127 12-36 (275)
450 PRK05565 fabG 3-ketoacyl-(acyl 20.8 1.2E+02 0.0026 29.5 4.1 30 85-124 6-35 (247)
451 PRK06487 glycerate dehydrogena 20.6 3.3E+02 0.0071 28.4 7.4 44 471-514 191-239 (317)
452 PRK09620 hypothetical protein; 20.6 1.4E+02 0.0031 29.5 4.5 20 108-127 33-52 (229)
453 PF09198 T4-Gluco-transf: Bact 20.5 2.7E+02 0.0058 18.6 4.1 36 85-122 1-38 (38)
454 PRK08219 short chain dehydroge 20.4 1.2E+02 0.0025 29.1 3.9 24 100-127 12-35 (227)
455 PRK08226 short chain dehydroge 20.3 1.3E+02 0.0028 29.7 4.3 25 100-127 15-39 (263)
456 PRK06463 fabG 3-ketoacyl-(acyl 20.3 1.3E+02 0.0028 29.6 4.3 25 100-127 16-40 (255)
457 COG1028 FabG Dehydrogenases wi 20.3 1.3E+02 0.0029 29.4 4.3 35 84-127 4-38 (251)
458 COG1893 ApbA Ketopantoate redu 20.3 1.1E+02 0.0024 31.8 3.8 32 85-127 1-32 (307)
459 COG1091 RfbD dTDP-4-dehydrorha 20.2 1.8E+02 0.0039 29.8 5.2 32 85-127 1-32 (281)
460 PLN02427 UDP-apiose/xylose syn 20.2 1.1E+02 0.0023 32.6 3.9 34 83-126 13-47 (386)
461 PRK09004 FMN-binding protein M 20.2 1.4E+02 0.003 27.2 4.0 26 100-125 12-37 (146)
462 COG2984 ABC-type uncharacteriz 20.1 4.2E+02 0.0091 27.7 7.7 98 419-521 146-255 (322)
463 cd01020 TroA_b Metal binding p 20.1 3.9E+02 0.0085 26.8 7.7 72 473-556 48-120 (264)
464 PRK13705 plasmid-partitioning 20.0 1.2E+02 0.0026 32.7 4.1 36 84-125 105-142 (388)
465 COG1692 Calcineurin-like phosp 20.0 4.4E+02 0.0094 26.5 7.5 103 405-509 2-115 (266)
No 1
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=3.8e-69 Score=604.10 Aligned_cols=467 Identities=33% Similarity=0.562 Sum_probs=393.4
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCcccccc-C-c---cEEEEEEeCCeeeEEEEEE
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW-D-T---DVVIELKVGDKIEKVRFFH 156 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~-~-~---~~~~~~~~~~~~~~~~~~~ 156 (612)
.++|||+||++|+.|++++||++++++.|+++|++.||+|.||+|.|+.....+ . . ........++....++++.
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 558 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE
Confidence 458999999999999999999999999999999999999999999998765321 1 1 1122223333344578888
Q ss_pred eeecCceEEEEeCc---cccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEE
Q 007212 157 CHKRGVDRVFVDHP---WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVF 233 (612)
Q Consensus 157 ~~~~gv~~~~v~~~---~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi 233 (612)
...+||++||++++ .|+.+ ..+|+ +.|+..||.+||+++++++..+++ +|| ||
T Consensus 559 ~~~~GV~vyfId~~~~~~fF~R------~~iYg------~~Dn~~RF~~FsrAaLe~~~~~~~-----------~PD-II 614 (977)
T PLN02939 559 GTVEGLPVYFIEPQHPSKFFWR------AQYYG------EHDDFKRFSYFSRAALELLYQSGK-----------KPD-II 614 (977)
T ss_pred EEECCeeEEEEecCCchhccCC------CCCCC------CccHHHHHHHHHHHHHHHHHhcCC-----------CCC-EE
Confidence 88899999999853 26665 56886 679999999999999999998765 499 59
Q ss_pred EeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHH
Q 007212 234 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 313 (612)
Q Consensus 234 ~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 313 (612)
|||||++++++.+++..+...+ +.++|+||||||+.|||.|+...+..+|++....... +++... +...+|++|.
T Consensus 615 H~HDW~TaLV~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~---d~le~~-~~~~iN~LK~ 689 (977)
T PLN02939 615 HCHDWQTAFVAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRP---DRMQDN-AHGRINVVKG 689 (977)
T ss_pred EECCccHHHHHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccCh---hhhhhc-cCCchHHHHH
Confidence 9999999998666555454444 3688999999999999999888887788886654322 222111 2357899999
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
++..||.|+|||+.+++++.. .+|..++..+ +..++.+|+||||.+.|+|..+++|..+|+..++ .+|..++..+
T Consensus 690 GIv~AD~VtTVSptYA~EI~t--e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aL 766 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRS--EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDL-QGKAANKAAL 766 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHH--HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhh-hhhhhhhHHH
Confidence 999999999999999999986 4565555554 3469999999999999999999999999999997 6899999999
Q ss_pred HHHhCCCCC-CCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-hhHHHHHHHHHHHCC--CceEEEeccC
Q 007212 392 QAEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYP--EKARGVAKFN 467 (612)
Q Consensus 392 ~~~~gl~~~-~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~--~~v~~~~~~~ 467 (612)
++++|++.+ ++.++|+|+||+.++||++.+++|+..+.+.+++|+|+|+|+ ..+++.+++++.+++ ++|.+.+.++
T Consensus 767 RkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~d 846 (977)
T PLN02939 767 RKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYD 846 (977)
T ss_pred HHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccC
Confidence 999999864 467899999999999999999999998877789999999996 466788888888774 5799999999
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec---------CcceEEecccccccccCCCC
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---------GFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---------g~~G~~~~~~~~~~~~v~~~ 538 (612)
....+.+|++||++|+||++||||++++|||+||+|||++++||+.|+|.+ +.+||+| ++.
T Consensus 847 e~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf----------~~~ 916 (977)
T PLN02939 847 EALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF----------LTP 916 (977)
T ss_pred HHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe----------cCC
Confidence 888889999999999999999999999999999999999999999999975 5799987 899
Q ss_pred CHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 539 DVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 539 d~~~la~~i~~ll~~~--~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
|+++|+++|.+++..+ .++.+.+|+++++.++|||+.++++|+++|++++..
T Consensus 917 D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 917 DEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999998733 367889999999999999999999999999999854
No 2
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=9.6e-68 Score=580.20 Aligned_cols=467 Identities=37% Similarity=0.608 Sum_probs=388.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccE-EEEEEeCCeeeEEEEEEeeec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDV-VIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|++|||+||++|+.|++|+||++++++.|+++|+++||+|.|+.|.|++..+...... ...+.+.- ...+++++...+
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLF-GGPARLLAARAG 79 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeC-CceEEEEEEEeC
Confidence 5689999999999999999999999999999999999999999999998865433322 12222110 114677888889
Q ss_pred CceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
||+++|++++.|+.+ .+.+|++..|.+|.|+..||.+||++++++++.+... .+||| ||+|||++
T Consensus 80 ~v~~~~~~~~~~f~r-----~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~~---------~~pDI-iH~Hdw~~ 144 (485)
T PRK14099 80 GLDLFVLDAPHLYDR-----PGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVPG---------FVPDI-VHAHDWQA 144 (485)
T ss_pred CceEEEEeChHhhCC-----CCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhccC---------CCCCE-EEECCcHH
Confidence 999999999999886 1248988778899999999999999999998765211 25895 99999999
Q ss_pred cchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCE
Q 007212 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~ 320 (612)
++++.+++.... .++|+|+|+||+.+++.++...+..++++...... ++.. +.+.+++++.++..||.
T Consensus 145 ~l~~~~l~~~~~-----~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~i~~ad~ 212 (485)
T PRK14099 145 GLAPAYLHYSGR-----PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSL----DGVE---YYGGIGYLKAGLQLADR 212 (485)
T ss_pred HHHHHHHHhCCC-----CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCc----hhhh---hCCCccHHHHHHHhcCe
Confidence 999998864211 36899999999999999887777777776654321 1111 12456789999999999
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~ 398 (612)
|+|||+.+++++.. ..+|..++.++ +..++.+|+||+|.+.|+|..++.+..+|+..++ .++..++..+++++|++
T Consensus 213 vitVS~~~a~ei~~-~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~ 290 (485)
T PRK14099 213 ITTVSPTYALEIQG-PEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGLD 290 (485)
T ss_pred eeecChhHHHHHhc-ccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCCC
Confidence 99999999999985 23444333333 2358999999999999999999999999998876 57788889999999998
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
.+++.++|+++||+.++||++.+++|++.+.+.+++|+|+|+|+..+++.+++++.++++++..+.+++.+..+.++++|
T Consensus 291 ~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~a 370 (485)
T PRK14099 291 PDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGA 370 (485)
T ss_pred cccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcC
Confidence 76677899999999999999999999999977789999999998778889999988888777666777776666566789
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------cceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
|++|+||++|+||++++|||+||+|+|++++||+.|+|.++ .+|++| ++.|+++|+++|.+
T Consensus 371 Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~----------~~~d~~~La~ai~~ 440 (485)
T PRK14099 371 DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF----------SPVTADALAAALRK 440 (485)
T ss_pred CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe----------CCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999875 689987 99999999999998
Q ss_pred ---HHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 550 ---ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 550 ---ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++++ ++.+.+|+++++.++|||+.++++|+++|++++..
T Consensus 441 a~~l~~d--~~~~~~l~~~~~~~~fSw~~~a~~y~~lY~~l~~~ 482 (485)
T PRK14099 441 TAALFAD--PVAWRRLQRNGMTTDVSWRNPAQHYAALYRSLVAE 482 (485)
T ss_pred HHHHhcC--HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHhh
Confidence 4445 67889999999999999999999999999999753
No 3
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=2.4e-67 Score=577.58 Aligned_cols=467 Identities=29% Similarity=0.575 Sum_probs=391.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccc-cC---ccE--EEEEEeCCeeeEEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WD---TDV--VIELKVGDKIEKVRFFHC 157 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~-~~---~~~--~~~~~~~~~~~~~~~~~~ 157 (612)
+|||+||++|+.|++|+||++++++.|+++|+++||+|.|+.|.|....+. +. ... .+.+.+++.....+....
T Consensus 5 ~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (489)
T PRK14098 5 NFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT 84 (489)
T ss_pred CcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence 499999999999999999999999999999999999999999999987653 21 111 222333333333333333
Q ss_pred ee--cCceEEEEeCccccccccCCCCCcccCCC-CCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEE
Q 007212 158 HK--RGVDRVFVDHPWFLAKVWGKTQSKIYGPR-TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFV 234 (612)
Q Consensus 158 ~~--~gv~~~~v~~~~~~~~~~g~~~~~~y~~~-~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~ 234 (612)
.. .||++++++++.|+.+ ..+|++. .|.||.|+..||.+||++++++++.+.+ +||+ ||
T Consensus 85 ~~~~~~v~~~~~~~~~~f~r------~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~-----------~pDi-iH 146 (489)
T PRK14098 85 ALPSSKIQTYFLYNEKYFKR------NGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGW-----------KPDI-IH 146 (489)
T ss_pred cccCCCceEEEEeCHHHcCC------CCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCC-----------CCCE-EE
Confidence 33 3799999999999987 5799876 6789999999999999999999988765 4895 99
Q ss_pred eCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHH
Q 007212 235 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG 314 (612)
Q Consensus 235 ~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 314 (612)
+|||+++++|.+++..+.....+.++|+|+|+||+.+||.++...+..+ ++......+ . .....++++|.+
T Consensus 147 ~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~------~--~~~~~~n~lk~~ 217 (489)
T PRK14098 147 CHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGL------H--REGDEVNMLYTG 217 (489)
T ss_pred ecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhh------h--hcCCcccHHHHH
Confidence 9999999999999877644444568999999999999998876554433 433321111 1 012467999999
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhh--ccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~--~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
+..||.|+|||+.+++++.+...+|..++.+++ ..++.+|+||+|.+.|+|..++.+..+|+..++ ..|..++..++
T Consensus 218 i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~ 296 (489)
T PRK14098 218 VEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALL 296 (489)
T ss_pred HHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHH
Confidence 999999999999999999852234444444443 359999999999999999998889999999876 57778899999
Q ss_pred HHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHH
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 472 (612)
+++|++.+++.++|+++||+.++||++.+++|++++.+.+++|+|+|+|+..+++.+++++.++++++.+.+.++.++++
T Consensus 297 ~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~ 376 (489)
T PRK14098 297 EEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFH 376 (489)
T ss_pred HHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHH
Confidence 99999988788999999999999999999999999987899999999998778899999999888889999999999999
Q ss_pred HHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec----CcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~----g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
.+|++||++++||++|+||++++|||+||+|+|++++||+.|++.+ +.+|++| ++.|+++|+++|.
T Consensus 377 ~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~----------~~~d~~~la~ai~ 446 (489)
T PRK14098 377 LAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF----------HDYTPEALVAKLG 446 (489)
T ss_pred HHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe----------CCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999874 6799987 9999999999999
Q ss_pred HHHHhh-CHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Q 007212 549 RALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 549 ~ll~~~-~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
++++.+ .++.+.+++++++.++|||+.++++|+++|++++
T Consensus 447 ~~l~~~~~~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 447 EALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred HHHHHHcCHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Confidence 987543 2578888999999999999999999999999886
No 4
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=1.3e-63 Score=549.58 Aligned_cols=459 Identities=45% Similarity=0.772 Sum_probs=393.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccC----ccEEEEEEeCCeeeEEEEEEeeec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWD----TDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|||++|+.|++|+.++||+++++..|+++|+++||+|+|++|.|+...+.+. ......+.+++....+++++...+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 8999999999999999999999999999999999999999999998766543 223445667777788889999999
Q ss_pred CceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
||++++++++.++.+- ..+|++ ||.++..||.+|+++++++++.+.+ +|| |||+|||++
T Consensus 81 ~v~~~~i~~~~~~~r~-----~~~y~~----~~~d~~~r~~~f~~a~~~~~~~~~~-----------~~D-iiH~hdw~~ 139 (473)
T TIGR02095 81 GVPVYFIDNPSLFDRP-----GGIYGD----DYPDNAERFAFFSRAAAELLSGLGW-----------QPD-VVHAHDWHT 139 (473)
T ss_pred CceEEEEECHHHcCCC-----CCCCCC----CCCCHHHHHHHHHHHHHHHHHhcCC-----------CCC-EEEECCcHH
Confidence 9999999999877641 247865 7899999999999999999987654 489 599999999
Q ss_pred cchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCE
Q 007212 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~ 320 (612)
++++.+++..+... ++|+|+|+|++.++|.++...+..++++..+... ..+. +...+++++.++..||.
T Consensus 140 ~~~~~~l~~~~~~~----~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 140 ALVPALLKAVYRPN----PIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHM----EGLE---FYGRVNFLKGGIVYADR 208 (473)
T ss_pred HHHHHHHHhhccCC----CCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCc----hhhh---cCCchHHHHHHHHhCCc
Confidence 99999998765211 4899999999999998887766666776543221 1111 12367899999999999
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~ 398 (612)
+++||+.+++++... .+|..++.++ +..++.+|+||+|.+.|+|..++++..+|+..++ ..+...+..+++++|++
T Consensus 209 v~tVS~~~~~ei~~~-~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~ 286 (473)
T TIGR02095 209 VTTVSPTYAREILTP-EFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLP 286 (473)
T ss_pred CeecCHhHHHHhcCC-cCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCC
Confidence 999999999999852 3444433322 2459999999999999999988889999998765 46666788999999999
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
.+++.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|++.+++.++++..+++.++.+.+.++.++++.++++|
T Consensus 287 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 366 (473)
T TIGR02095 287 VDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGA 366 (473)
T ss_pred ccCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhC
Confidence 76677999999999999999999999999987789999999998778889999998888889999999999999999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC------cceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
|++++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.++++
T Consensus 367 Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 367 DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLF----------EEYDPGALLAALSRALR 436 (473)
T ss_pred CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 899987 99999999999999988
Q ss_pred hh--CHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 553 TY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 553 ~~--~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
.+ .++.+++|+++++.++|||+.++++|+++|+++
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 437 LYRQDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHhcCHHHHHHHHHHHhccCCCcHHHHHHHHHHHHhC
Confidence 32 267889999999989999999999999999864
No 5
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.3e-62 Score=561.58 Aligned_cols=435 Identities=32% Similarity=0.561 Sum_probs=365.1
Q ss_pred cccccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEE
Q 007212 77 LMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFH 156 (612)
Q Consensus 77 ~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (612)
+.+...++|||+||+.++.|+.++||+++++..|+++|+++||+|.|++|.|+...............+......+++++
T Consensus 580 g~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~ 659 (1036)
T PLN02316 580 GGIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWF 659 (1036)
T ss_pred CCCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEE
Confidence 33444567999999999999999999999999999999999999999999998654332111111122222234567888
Q ss_pred eeecCceEEEEeCcc-ccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEe
Q 007212 157 CHKRGVDRVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVA 235 (612)
Q Consensus 157 ~~~~gv~~~~v~~~~-~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~ 235 (612)
...+||++++++++. ++.+ ..+|+ |.|+..||.+||++++++++.+.+ +||| |||
T Consensus 660 ~~~~GV~vyfl~~~~~~F~r------~~~Yg------~~Dd~~RF~~F~~Aale~l~~~~~-----------~PDI-IHa 715 (1036)
T PLN02316 660 GKVEGLSVYFLEPQNGMFWA------GCVYG------CRNDGERFGFFCHAALEFLLQSGF-----------HPDI-IHC 715 (1036)
T ss_pred EEECCcEEEEEeccccccCC------CCCCC------chhHHHHHHHHHHHHHHHHHhcCC-----------CCCE-EEE
Confidence 888999999999873 5554 35675 789999999999999999988764 4895 999
Q ss_pred CCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHH
Q 007212 236 NDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 315 (612)
Q Consensus 236 h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l 315 (612)
|||++++++.+++..+...++ .++|+|+|+|++.+++ +.++.++
T Consensus 716 HDW~talva~llk~~~~~~~~-~~~p~V~TiHnl~~~~-----------------------------------n~lk~~l 759 (1036)
T PLN02316 716 HDWSSAPVAWLFKDHYAHYGL-SKARVVFTIHNLEFGA-----------------------------------NHIGKAM 759 (1036)
T ss_pred CCChHHHHHHHHHHhhhhhcc-CCCCEEEEeCCcccch-----------------------------------hHHHHHH
Confidence 999999999999886644332 5789999999876532 3456788
Q ss_pred hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHh
Q 007212 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 395 (612)
..+|.|+|||+.+++++... .++.. +..++.+|+||||++.|+|.+++++..+|++.++..++...+..+++++
T Consensus 760 ~~AD~ViTVS~tya~EI~~~--~~l~~----~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~l 833 (1036)
T PLN02316 760 AYADKATTVSPTYSREVSGN--SAIAP----HLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRL 833 (1036)
T ss_pred HHCCEEEeCCHHHHHHHHhc--cCccc----ccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHh
Confidence 99999999999999999852 12211 1238999999999999999999999999999998888889999999999
Q ss_pred CCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-hhHHHHHHHHHHH----CCCceEEEeccChHH
Q 007212 396 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEIL----YPEKARGVAKFNIPL 470 (612)
Q Consensus 396 gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~----~~~~v~~~~~~~~~~ 470 (612)
|++. .+.++|+|+|||.++||++.|++|+..+.+.+++|+|+|+|+ ..+++.+++++.+ +++++.+.+.+++.+
T Consensus 834 GL~~-~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~l 912 (1036)
T PLN02316 834 GLKQ-ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPL 912 (1036)
T ss_pred CCCc-ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHH
Confidence 9984 356899999999999999999999999877789999999985 4567778888774 356788888998888
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC-------------cceEEecccccccccCCC
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-------------FTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g-------------~~G~~~~~~~~~~~~v~~ 537 (612)
.+.+|++||++|+||++||||+++||||+||+|||++++||++|+|.++ .+||+| ++
T Consensus 913 ah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf----------~~ 982 (1036)
T PLN02316 913 SHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF----------DG 982 (1036)
T ss_pred HHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe----------CC
Confidence 8899999999999999999999999999999999999999999999884 689987 99
Q ss_pred CCHHHHHHHHHHHHHhh-C-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Q 007212 538 VDVAAVSTTVRRALATY-G-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 538 ~d~~~la~~i~~ll~~~-~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
.|+++|+.+|.+++..+ . +..+.+++++++.++|||+.++++|+++|+++.
T Consensus 983 ~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 983 ADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 99999999999999874 2 355688889999999999999999999999875
No 6
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=2.1e-62 Score=538.40 Aligned_cols=453 Identities=41% Similarity=0.683 Sum_probs=377.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCc-cEEEEEEeCCeeeEEEEEEe--eecC
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIELKVGDKIEKVRFFHC--HKRG 161 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~g 161 (612)
|||+||+.+++|+.++||+++++..|+++|+++||+|+|++|.|+...+.... ....++ ...+++.. ..+|
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g 74 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL------DLFTVLFGHLEGDG 74 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEe------eeEEEEEEeEEcCC
Confidence 89999999999999999999999999999999999999999999876543211 111111 12344433 5589
Q ss_pred ceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
|++++++++.++.+ ..+|+ |.++..||.+|+++++++++.+++ +||+ ||+|||+++
T Consensus 75 v~v~~v~~~~~~~~------~~~y~------~~d~~~r~~~f~~~~~~~~~~~~~-----------~pDi-iH~h~w~~~ 130 (466)
T PRK00654 75 VPVYLIDAPHLFDR------PSGYG------YPDNGERFAFFSWAAAEFAEGLDP-----------RPDI-VHAHDWHTG 130 (466)
T ss_pred ceEEEEeCHHHcCC------CCCCC------CcChHHHHHHHHHHHHHHHHhcCC-----------CCce-EEECCcHHH
Confidence 99999999988876 45775 778999999999999999988754 4895 999999999
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEE
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~v 321 (612)
+++.+++..+ ..+ +.++|+|+|+|++.++|.++...+..++++..... .+.+. ....+++++.++..||.|
T Consensus 131 ~~~~~l~~~~-~~~-~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~ad~v 201 (466)
T PRK00654 131 LIPALLKEKY-WRG-YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFH----LEGLE---FYGQISFLKAGLYYADRV 201 (466)
T ss_pred HHHHHHHHhh-hcc-CCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcC----chhhh---cCCcccHHHHHHHhcCcC
Confidence 9999998765 222 34789999999999999887766666677655422 11111 113568899999999999
Q ss_pred EecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCC
Q 007212 322 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~ 399 (612)
+|+|+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|..++.+..+|++.++ +.+...+..+++++|++.
T Consensus 202 itvS~~~~~ei~~-~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~~ 279 (466)
T PRK00654 202 TTVSPTYAREITT-PEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLPD 279 (466)
T ss_pred eeeCHHHHHHhcc-ccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCCC
Confidence 9999999999875 22332222222 2348999999999999999988888889988775 477778889999999983
Q ss_pred CCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 400 ~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
++.++|+|+||+.++||++.+++|++++.+++++|+|+|+|+..+++.+++++.+++.++.+...++.++.+.++++||
T Consensus 280 -~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aD 358 (466)
T PRK00654 280 -DDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGAD 358 (466)
T ss_pred -CCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCC
Confidence 3568999999999999999999999999777999999999987788899999998887787778888888888999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC------cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
++|+||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++|+++|.++++.
T Consensus 359 v~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv----------~~~d~~~la~~i~~~l~~ 428 (466)
T PRK00654 359 MFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVF----------DDFNAEDLLRALRRALEL 428 (466)
T ss_pred EEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 899987 999999999999999874
Q ss_pred hC-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 554 YG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 554 ~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
+. ++.+.+++++++.++|||+.++++|+++|++++.
T Consensus 429 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 429 YRQPPLWRALQRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred hcCHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 32 4668889999988999999999999999998864
No 7
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=3.7e-59 Score=515.00 Aligned_cols=462 Identities=44% Similarity=0.746 Sum_probs=387.1
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEE----EEEEeCCeeeEEEEEEeeecC
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVV----IELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g 161 (612)
||++|+.|++|+.++||+++++..|+++|+++||+|+|++|.|+...+.+..... ..+...+....++.++...+|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 7999999999999999999999999999999999999999999987765543322 234456667778888888999
Q ss_pred ceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
|++++++++.++.+ ..+| +..+.+|.++..+|.+|+++++++++.+.. +||+ ||+|||+++
T Consensus 81 v~~~~l~~~~~~~~------~~~~-~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~-----------~pDv-iH~hd~~t~ 141 (476)
T cd03791 81 VPVYFLDNPDYFDR------PGLY-DDSGYDYEDNAERFALFSRAALELLRRLGW-----------KPDI-IHCHDWHTG 141 (476)
T ss_pred ceEEEEcChHHcCC------CCCC-CccCCCCccHHHHHHHHHHHHHHHHHhcCC-----------CCcE-EEECchHHH
Confidence 99999999988875 3344 445567899999999999999999988753 5895 999999999
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEE
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~v 321 (612)
+++.+++..+.. ..+.++|+|+|+|++.++|.++...+..++.+.... .....+ .+...+++++.++..||.+
T Consensus 142 ~~~~~l~~~~~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~ad~v 214 (476)
T cd03791 142 LVPALLKEKYAD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEEL---FHIDGL---EFYGQVNFLKAGIVYADAV 214 (476)
T ss_pred HHHHHHHHhhcc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccch---hhhccc---ccCCcccHHHHHHHhcCcC
Confidence 999999877533 223589999999999999987766555444332100 011111 1234568899999999999
Q ss_pred EecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCC
Q 007212 322 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~ 399 (612)
+++|+.+++++.+ ..+|..++.++ +..++.+|+||+|.+.|.|..++.+...|+.. ....+...+..+++++|++.
T Consensus 215 ~~vS~~~~~~i~~-~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~-~~~~~~~~k~~l~~~~g~~~ 292 (476)
T cd03791 215 TTVSPTYAREILT-PEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSAD-DLEGKAENKAALQEELGLPV 292 (476)
T ss_pred eecCHhHHHHhCC-CCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCcc-ccccHHHHHHHHHHHcCCCc
Confidence 9999999999875 22333333333 23599999999999999999888888888854 44678888999999999986
Q ss_pred CCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 400 ~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
+++.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|+..+++.++++..++++++.++..++.++.+.++++||
T Consensus 293 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 372 (476)
T cd03791 293 DPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGAD 372 (476)
T ss_pred CCCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCC
Confidence 66789999999999999999999999999877799999999987888899999888777899899999888889999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCc------ceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~------~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
++++||.+|+||++++|||+||+|||++++||+.|+|.++. +|+++ ++.|+++++++|.++++.
T Consensus 373 v~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~----------~~~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 373 FFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF----------EGYNADALLAALRRALAL 442 (476)
T ss_pred EEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe----------CCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999987 99987 999999999999999876
Q ss_pred hC-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 554 YG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 554 ~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+. ++.+.+++++++.+.|||+.++++|+++|+
T Consensus 443 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 443 YRDPEAWRKLQRNAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HcCHHHHHHHHHHHhccCCChHHHHHHHHHHHh
Confidence 53 578899999999999999999999999996
No 8
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-59 Score=500.27 Aligned_cols=464 Identities=39% Similarity=0.612 Sum_probs=400.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCcc----EEEEEEeCCeeeEEEEEEeeec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD----VVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|||++++.|+.|+.++||++++++.|+++|++.||+|.|+.|.|+...+.|... ....+..++..+.....+..+.
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 999999999999999999999999999999999999999999999777766553 2233334444434444444433
Q ss_pred -CceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCc
Q 007212 161 -GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWH 239 (612)
Q Consensus 161 -gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~ 239 (612)
|++.+++|++.+++|- +..+.+|.|+..||.+|++++++.+...... ..|| |||+||||
T Consensus 81 ~~v~~~lid~~~~f~r~----------~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~---------~~pD-IvH~hDWq 140 (487)
T COG0297 81 GGVDLYLIDNPALFKRP----------DSTLYGYYDNAERFAFFSLAAAELAPLGLIS---------WLPD-IVHAHDWQ 140 (487)
T ss_pred CCCcEEEecChhhcCcc----------ccccCCCCcHHHHHHHHHHHHHHHhhhcCCC---------CCCC-EEEeecHH
Confidence 4999999999887751 2334459999999999999999999776520 1489 59999999
Q ss_pred ccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCC
Q 007212 240 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad 319 (612)
++++|.+++..+.. +..+|.|||+||+.+||.|.......+++|..+... +....+ ..++++|.++..||
T Consensus 141 t~L~~~~lk~~~~~---~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~-~~l~~~------~~~~~lK~gi~~ad 210 (487)
T COG0297 141 TGLLPAYLKQRYRS---GYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYAS-FGLEFY------GQISFLKGGLYYAD 210 (487)
T ss_pred HHHHHHHHhhcccc---cccCCeEEEEeeceeecccchhhHHHhcCCHHHhhh-ceeeec------Ccchhhhhhheecc
Confidence 99999999986511 158999999999999999997777889999866542 111111 35789999999999
Q ss_pred EEEecCHHHHHHHHcCcCCCccchhhhh--ccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCC
Q 007212 320 MVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 320 ~vi~vS~~~~~~l~~~~~~G~~~~~~~~--~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl 397 (612)
.|.|||+.+++++. ..++|..++..++ ..++..|.||+|...|+|.+++++..+|+..+.. ++..++..+++++||
T Consensus 211 ~vttVSptYa~Ei~-t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~-~k~~nk~~L~~~~gL 288 (487)
T COG0297 211 AVTTVSPTYAGEIY-TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP-AKAENKVALQERLGL 288 (487)
T ss_pred EEEEECHHHHHhhc-cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh-hhHHHHHHHHHHhCC
Confidence 99999999999999 4678877766663 3689999999999999999999999999988876 599999999999999
Q ss_pred CCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007212 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 398 ~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 477 (612)
+.+.+.|++.++||+..|||+|.+++++..+.+..++++++|+|+..++..+..++..+++++....+|+.+..+.+++.
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~ag 368 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAG 368 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhc
Confidence 98888899999999999999999999999999888999999999999999999999999999999999999999999999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec--------CcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--------g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
+|++++||++||||+++++||++|+++|+..+||++|+|.+ ..+||+| .+.++++|+.+|.+
T Consensus 369 aD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f----------~~~~~~~l~~al~r 438 (487)
T COG0297 369 ADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF----------LQTNPDHLANALRR 438 (487)
T ss_pred CCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEE----------ecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986 5799998 78899999999999
Q ss_pred HHHhhC-HHH-HHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 550 ALATYG-TQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 550 ll~~~~-~~~-~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++.-+. ++. ++.+.++++..+|||+..+++|.++|+.+...
T Consensus 439 A~~~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~~~ 481 (487)
T COG0297 439 ALVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYKPLLSK 481 (487)
T ss_pred HHHHhhCCHHHHHHHHHhhcccccCchhHHHHHHHHHHHHhcc
Confidence 998764 344 88888999999999999999999999998754
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=8.7e-40 Score=362.60 Aligned_cols=462 Identities=18% Similarity=0.236 Sum_probs=360.0
Q ss_pred ccccHHHHhhchHHHHHhCCCeEEEEEecCCc-cc--------------cccC-------c-------cEEEEEEeCCee
Q 007212 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK--------------DAWD-------T-------DVVIELKVGDKI 149 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~-~~--------------~~~~-------~-------~~~~~~~~~~~~ 149 (612)
..||+|...+...++++..|...+.++-.|.+ |. +.|+ . ...+.+.+.++.
T Consensus 17 ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~~~~g~~~~~~v~i~g~~ 96 (601)
T TIGR02094 17 YSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVLDTDGKWLKISVRIRGRD 96 (601)
T ss_pred cCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEecCCCCeEEEEEecCCcE
Confidence 58999999999999999999999999877641 11 1121 1 123677778888
Q ss_pred eEEEEEEeeecCceEEEEeCccccccccCCCCC-cccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCC
Q 007212 150 EKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGK 228 (612)
Q Consensus 150 ~~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~~~-~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 228 (612)
..++.+....+++++++++++..-...|.+... .+|++ |..++..++.+|+.++++.++.+++ +
T Consensus 97 ~~~rlw~~~~~~v~lylld~~~~~n~~~~R~it~~LY~~----D~~~R~~Qe~fl~~a~l~~l~~l~~-----------~ 161 (601)
T TIGR02094 97 VYAKVWRVQVGRVPLYLLDTNIPENSEDDRWITGRLYGG----DKEMRIAQEIVLGIGGVRALRALGI-----------D 161 (601)
T ss_pred EEEEEEEEEeCCCCEEEecCCCcccchhhcCccCCCCCC----CHHHHHHHHHHHHHHHHHHHHHcCC-----------C
Confidence 889999988899999999988622222333332 46863 3455666669999999999998875 4
Q ss_pred CcEEEEeCCCcccchHHHHHhhhcCCCC-----c--CCceEEEEEecCCcccc--cCccccc--------ccCCCccccc
Q 007212 229 KNVVFVANDWHTSLIPCYLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFEDFG--------LLNLPAQFKS 291 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~~~~~~~-----~--~~~pvv~~iH~~~~~~~--~~~~~~~--------~~~l~~~~~~ 291 (612)
||+ ||+||||+++++.++.+..-..++ + .+.+++||+||+.++|. |+...+. .++++.....
T Consensus 162 pdv-iH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~~~ 240 (601)
T TIGR02094 162 PDV-YHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQLL 240 (601)
T ss_pred ceE-EEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHHHH
Confidence 895 999999999999987543111110 0 14779999999999997 8876663 3566655433
Q ss_pred ccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCccc
Q 007212 292 SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDK 369 (612)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~ 369 (612)
..... .+-....+++++.++..||.|.+||+.+.+..... .+ ++...+ +..++..|.||||...|.|.+++
T Consensus 241 ~~~~~----~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l--~~-~l~~~~~~~~~~i~gItNGId~~~W~~~~~~ 313 (601)
T TIGR02094 241 ALGRE----NPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKM--WQ-FLYPGYEEEEVPIGYVTNGVHNPTWVAPELR 313 (601)
T ss_pred hhhhh----ccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHH--HH-hhhhhcccccCCccceeCCccccccCCHHHH
Confidence 22111 11011357999999999999999999998833321 00 011111 12368999999999999999999
Q ss_pred ccccccCcch---------------------hhhccHHHHHHHHH---------------------HhCCCCCCCCcEEE
Q 007212 370 YIGVKYDAST---------------------VMDAKPLLKEALQA---------------------EVGLPVDRNIPVIG 407 (612)
Q Consensus 370 ~~~~~~~~~~---------------------~~~~~~~~~~~l~~---------------------~~gl~~~~~~~~i~ 407 (612)
.+..+|+..+ +.++|..+|.+|++ ++|++.+++.++++
T Consensus 314 ~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig 393 (601)
T TIGR02094 314 DLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIG 393 (601)
T ss_pred HHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEE
Confidence 9999999877 34789999999988 58888888999999
Q ss_pred EEccCccccCHHHHHHHHHhccc------CCeEEEEEecCChh------HHHHHHHHHHH--CCCceEEEeccChHHHHH
Q 007212 408 FIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEIL--YPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 408 ~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~~~------~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~ 473 (612)
+++|+.++||.+++++++..+.+ .++||+++|++.+. +++.+.+++.+ +++++.++..|+..+++.
T Consensus 394 ~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~~~~~~~kv~f~~~Yd~~lA~~ 473 (601)
T TIGR02094 394 FARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSKRPEFRGRIVFLENYDINLARY 473 (601)
T ss_pred EEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHhcccCCCCEEEEcCCCHHHHHH
Confidence 99999999999999999988853 57999999999854 99999999988 888999999999999999
Q ss_pred HHHhccEEEE-cCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccc--cccccCCCCCHHHHHHHHHH
Q 007212 474 IIAGADFILI-PSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFS--VDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 474 i~~~aDv~v~-pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~--~~~~~v~~~d~~~la~~i~~ 549 (612)
++++||++++ ||+ +|+||++.+-||..|.+.+++-.|...|.. ++.|||.||... .+.+..|..|.++|.++|++
T Consensus 474 i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ 552 (601)
T TIGR02094 474 LVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLEN 552 (601)
T ss_pred HhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccccccCCCHHHHHHHHHH
Confidence 9999999999 999 999999999999999999999988888887 567999997321 12233457899999999988
Q ss_pred HH-Hhh-C------HHHHHHHHHHHHHh---hcCcHHHHHHHHHHH
Q 007212 550 AL-ATY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEETL 584 (612)
Q Consensus 550 ll-~~~-~------~~~~~~~~~~~~~~---~fsw~~~a~~~~~~y 584 (612)
.+ ..+ . +..+.++.+++|.. +|||++++++|.++|
T Consensus 553 ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~y 598 (601)
T TIGR02094 553 EVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKF 598 (601)
T ss_pred HHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh
Confidence 77 332 1 34689999999987 899999999999987
No 10
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=2.6e-39 Score=350.41 Aligned_cols=396 Identities=17% Similarity=0.189 Sum_probs=277.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++|+.+|+|. .||.+.++.+|+++|.++||+|+|+|+.. .++. |..... ........+...|+++
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~-~~~~-~~~~~~--------~~~~~~~~~~~~~i~v 68 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPP-YYPQ-WRVGEG--------YSAWRYRRESEGGVTV 68 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCC-CCCC-CCCCcc--------cccccceeeecCCeEE
Confidence 8999999999897 89999999999999999999999999762 1111 110000 0001122234568888
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHH-hhhhccCCCCccCCCCCCCcEEEEeCCCcc--c
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGKKNVVFVANDWHT--S 241 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~--~ 241 (612)
+++....... .. .......+..|....+.. .+... .+||+ ||+|.+.. +
T Consensus 69 ~r~~~~~~~~---------~~-------~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~Di-v~~~~p~~~~~ 120 (412)
T PRK10307 69 WRCPLYVPKQ---------PS-------GLKRLLHLGSFALSSFFPLLAQRR-----------WRPDR-VIGVVPTLFCA 120 (412)
T ss_pred EEccccCCCC---------cc-------HHHHHHHHHHHHHHHHHHHhhccC-----------CCCCE-EEEeCCcHHHH
Confidence 8774311100 00 000111111122222222 22211 25895 88886432 2
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCc-hhHHHHHHHhhCCE
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR-KINWMKAGILESDM 320 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~k~~l~~ad~ 320 (612)
.....+++. .++|+++++|+..++..+. .+... . +...+ ...+++..++.+|.
T Consensus 121 ~~~~~~~~~-------~~~~~v~~~~d~~~~~~~~------~~~~~---~----------~~~~~~~~~~~~~~~~~ad~ 174 (412)
T PRK10307 121 PGARLLARL-------SGARTWLHIQDYEVDAAFG------LGLLK---G----------GKVARLATAFERSLLRRFDN 174 (412)
T ss_pred HHHHHHHHh-------hCCCEEEEeccCCHHHHHH------hCCcc---C----------cHHHHHHHHHHHHHHhhCCE
Confidence 333344443 4789999999754321110 01000 0 00001 11345677889999
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 400 (612)
++++|+..++.+.+ +|.+.+ ++.+||||+|.+.|.|.... ....++++++++.
T Consensus 175 ii~~S~~~~~~~~~---~~~~~~------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~- 227 (412)
T PRK10307 175 VSTISRSMMNKARE---KGVAAE------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPD- 227 (412)
T ss_pred EEecCHHHHHHHHH---cCCCcc------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCC-
Confidence 99999999999886 455444 89999999999888764321 1335677888864
Q ss_pred CCCcEEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCC-CceEEEeccChHHHHHHHHhc
Q 007212 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 401 ~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~i~~~a 478 (612)
+.++|+|+||+.+.||++.|++|++.+.+ ++++|+|+|+|+ ..+.+++++.+++ .++.+.+..+.+.+..+++.|
T Consensus 228 -~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~a 304 (412)
T PRK10307 228 -GKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG--GKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMA 304 (412)
T ss_pred -CCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh--hHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhc
Confidence 34899999999999999999999998865 689999999998 5566777666543 358888877888888999999
Q ss_pred cEEEEcCCCCC----CcHHHHHHHHcCCceEEcCCCC--cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEP----CGLIQLHAMRYGTVPIVASTGG--LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 Dv~v~pS~~E~----~gl~~lEAma~G~PvI~s~~gg--~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
|++++||..|+ +|.+++|||+||+|||+|+.+| +.|++. .+|+++ +++|+++++++|.++++
T Consensus 305 Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~----------~~~d~~~la~~i~~l~~ 372 (412)
T PRK10307 305 DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCV----------EPESVEALVAAIAALAR 372 (412)
T ss_pred CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEe----------CCCCHHHHHHHHHHHHh
Confidence 99999999988 5778999999999999999876 457776 589976 99999999999999998
Q ss_pred hhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
+ ++.+.+|++++ +.++|||+.++++|+++|++++.+
T Consensus 373 ~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~ 411 (412)
T PRK10307 373 Q--ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVAE 411 (412)
T ss_pred C--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhcC
Confidence 8 66777777776 467899999999999999998754
No 11
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=2e-39 Score=370.17 Aligned_cols=451 Identities=17% Similarity=0.147 Sum_probs=291.1
Q ss_pred CCCceEEEEEecccC---------ccccccHHHHhhchHHHHHhCC--CeEEEEEecCCccccccCccEEEEEEeCCe-e
Q 007212 82 GVGLNILFVGTEVAP---------WSKTGGLGDVLGGLPPALAANG--HRVMTIAPRYDQYKDAWDTDVVIELKVGDK-I 149 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P---------~~~~GG~~~~~~~L~~~L~~~G--h~V~vit~~~~~~~~~~~~~~~~~~~~~~~-~ 149 (612)
.++|.|++|+..-.| .+.+||...|+.+|+++|+++| |+|+|+|...+...-.|+.....+.. .++ .
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~-~~~~~ 245 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML-TPRSS 245 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccc-ccccc
Confidence 458999999864332 2458999999999999999998 89999997744211112211111110 000 0
Q ss_pred eEEEEEEeeecCceEEEEeCcc---ccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccC-CC
Q 007212 150 EKVRFFHCHKRGVDRVFVDHPW---FLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFS-GP 225 (612)
Q Consensus 150 ~~~~~~~~~~~gv~~~~v~~~~---~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~-~~ 225 (612)
+.........+|+.+++|+... ++.| ..-+.....|...++..++.+...-..-+. |.
T Consensus 246 ~~~~~~~~~~~g~rIvRip~GP~~~~l~K------------------e~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~ 307 (1050)
T TIGR02468 246 ENDGDEMGESSGAYIIRIPFGPRDKYIPK------------------EELWPYIPEFVDGALSHIVNMSKVLGEQIGSGH 307 (1050)
T ss_pred ccccccccCCCCeEEEEeccCCCCCCcCH------------------HHHHHHHHHHHHHHHHHHHhhhhhhhhhhcccc
Confidence 0011111234588888875332 2222 001122334555555554331000000000 00
Q ss_pred CCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCC
Q 007212 226 YGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 305 (612)
Q Consensus 226 ~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (612)
-..||| ||+|+|..+.++..++... ++|+|+|.|.+..... ..+..-+... .. .....|. ..
T Consensus 308 ~~~pDv-IHaHyw~sG~aa~~L~~~l-------gVP~V~T~HSLgr~K~---~~ll~~g~~~--~~--~~~~~y~---~~ 369 (1050)
T TIGR02468 308 PVWPYV-IHGHYADAGDSAALLSGAL-------NVPMVLTGHSLGRDKL---EQLLKQGRMS--KE--EINSTYK---IM 369 (1050)
T ss_pred CCCCCE-EEECcchHHHHHHHHHHhh-------CCCEEEECccchhhhh---hhhccccccc--cc--ccccccc---hH
Confidence 012895 9999999999999999874 9999999997632110 0000000000 00 0000000 11
Q ss_pred chhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccch--hh----h---------hccCeEEeeCCccCCCcCCCcccc
Q 007212 306 RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELD--NI----I---------RKTGIKGIVNGMDVQEWNPLTDKY 370 (612)
Q Consensus 306 ~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~--~~----~---------~~~~i~vI~ngvd~~~~~p~~~~~ 370 (612)
+.+..++..+..||.||++|+..++++.+.+. +.++. .. + ...++.|||||||+..|.|.....
T Consensus 370 ~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~-~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~ 448 (1050)
T TIGR02468 370 RRIEAEELSLDASEIVITSTRQEIEEQWGLYD-GFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDM 448 (1050)
T ss_pred HHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhc-cCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccc
Confidence 34566788999999999999999998765321 11110 00 0 012899999999999998853210
Q ss_pred cccccCcchh------hhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc----CCeEEEEEec
Q 007212 371 IGVKYDASTV------MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLGT 440 (612)
Q Consensus 371 ~~~~~~~~~~------~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~----~~~~lvivG~ 440 (612)
+.... ....+.....+++.+ .+ +++++|+|+||+.++||++.||+|+..+.+ +++. +|+|.
T Consensus 449 -----~~~~~~~~~~~~~~~~~~~~~l~r~~-~~--pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~-LIiG~ 519 (1050)
T TIGR02468 449 -----DGETEGNEEHPAKPDPPIWSEIMRFF-TN--PRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGN 519 (1050)
T ss_pred -----cchhcccccccccccchhhHHHHhhc-cc--CCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE-EEEec
Confidence 00000 000000112233333 22 355899999999999999999999999853 3555 46687
Q ss_pred CCh---------hHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc----cEEEEcCCCCCCcHHHHHHHHcCCceE
Q 007212 441 GKK---------PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPI 505 (612)
Q Consensus 441 g~~---------~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~a----Dv~v~pS~~E~~gl~~lEAma~G~PvI 505 (612)
++. .+...+.++..+++ ++|.+.+..+.+.++.+|+.| |+||+||.+|+||++++||||||+|||
T Consensus 520 gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVV 599 (1050)
T TIGR02468 520 RDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMV 599 (1050)
T ss_pred CchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEE
Confidence 642 12345666666654 567777766778888899887 699999999999999999999999999
Q ss_pred EcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHH
Q 007212 506 VASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 583 (612)
Q Consensus 506 ~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 583 (612)
+|+.||+.|+|.++.+|+++ ++.|+++|+++|.+++++ ++.+++|++++. .++|||+.++++|++.
T Consensus 600 ASdvGG~~EII~~g~nGlLV----------dP~D~eaLA~AL~~LL~D--pelr~~m~~~gr~~v~~FSWe~ia~~yl~~ 667 (1050)
T TIGR02468 600 ATKNGGPVDIHRVLDNGLLV----------DPHDQQAIADALLKLVAD--KQLWAECRQNGLKNIHLFSWPEHCKTYLSR 667 (1050)
T ss_pred EeCCCCcHHHhccCCcEEEE----------CCCCHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 99999999999999999976 999999999999999998 777888888773 4679999999999999
Q ss_pred HHHHHHcC
Q 007212 584 LLNLEVAG 591 (612)
Q Consensus 584 y~~l~~~~ 591 (612)
|..+....
T Consensus 668 i~~~~~~~ 675 (1050)
T TIGR02468 668 IASCRPRH 675 (1050)
T ss_pred HHHHhccC
Confidence 99887543
No 12
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=6.7e-39 Score=346.13 Aligned_cols=387 Identities=20% Similarity=0.267 Sum_probs=275.9
Q ss_pred EEEEEecccCcc-----ccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecC
Q 007212 87 ILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 87 Il~v~~~~~P~~-----~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
|++++....|+. ..||.+.++.+|+++|+++||+|+|+|+........ .....+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~--------------------~~~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQPP--------------------VVEVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC--------------------ccccCCC
Confidence 567777777752 259999999999999999999999999763211100 0112356
Q ss_pred ceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHH-HHhhhhccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAAL-EAPRILNLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 162 v~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
++++.+....+... ........+..+....+ ..++... ++||+ +|+|+|..
T Consensus 61 ~~v~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~Di-ih~h~~~~ 112 (405)
T TIGR03449 61 VRVRNVVAGPYEGL----------------DKEDLPTQLCAFTGGVLRAEARHEP-----------GYYDL-IHSHYWLS 112 (405)
T ss_pred cEEEEecCCCcccC----------------CHHHHHHHHHHHHHHHHHHHhhccC-----------CCCCe-EEechHHH
Confidence 77766633221110 00000111111222222 2222211 24895 89999888
Q ss_pred cchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCE
Q 007212 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~ 320 (612)
+.++.++++. .++|+|+++|+...... ..+.....+ .......+.+..++.+|.
T Consensus 113 ~~~~~~~~~~-------~~~p~v~t~h~~~~~~~---~~~~~~~~~----------------~~~~~~~~e~~~~~~~d~ 166 (405)
T TIGR03449 113 GQVGWLLRDR-------WGVPLVHTAHTLAAVKN---AALADGDTP----------------EPEARRIGEQQLVDNADR 166 (405)
T ss_pred HHHHHHHHHh-------cCCCEEEeccchHHHHH---HhccCCCCC----------------chHHHHHHHHHHHHhcCe
Confidence 7777776654 48899999996532100 000000000 000111223567889999
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 400 (612)
++++|+...+.+... +|.+.+ ++.+|+||+|.+.|.|.. +...+++++++.
T Consensus 167 vi~~s~~~~~~~~~~--~~~~~~------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~- 217 (405)
T TIGR03449 167 LIANTDEEARDLVRH--YDADPD------RIDVVAPGADLERFRPGD--------------------RATERARLGLPL- 217 (405)
T ss_pred EEECCHHHHHHHHHH--cCCChh------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCC-
Confidence 999999988887642 454433 899999999998886642 345677788764
Q ss_pred CCCcEEEEEccCccccCHHHHHHHHHhccc--CC--eEEEEEecCC--h-hHHHHHHHHHHHCC--CceEEEeccChHHH
Q 007212 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN--VQIIVLGTGK--K-PMEKQLEQLEILYP--EKARGVAKFNIPLA 471 (612)
Q Consensus 401 ~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~--~~lvivG~g~--~-~~~~~l~~l~~~~~--~~v~~~~~~~~~~~ 471 (612)
+.++|+|+||+.+.||++.+++|++.+.+ ++ ++|+|+|.+. . ...+.++++....+ +++.+.+..+.+++
T Consensus 218 -~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 296 (405)
T TIGR03449 218 -DTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEEL 296 (405)
T ss_pred -CCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHHH
Confidence 44899999999999999999999999854 44 9999999632 1 34556677666554 46888887788888
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
..+++.||++++||..|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.+++
T Consensus 297 ~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~la~~i~~~l 366 (405)
T TIGR03449 297 VHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLV----------DGHDPADWADALARLL 366 (405)
T ss_pred HHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEEC----------CCCCHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999976 8999999999999999
Q ss_pred HhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
++ ++.+.+++.++. .++|||+.++++|+++|.+++.
T Consensus 367 ~~--~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 367 DD--PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred hC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 87 666777777663 5789999999999999998763
No 13
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=1.7e-38 Score=346.64 Aligned_cols=393 Identities=19% Similarity=0.182 Sum_probs=260.1
Q ss_pred cCccccccHHHHhhchHHHHHhCCC--eEEEEEecCCccc--cccCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeCc
Q 007212 95 APWSKTGGLGDVLGGLPPALAANGH--RVMTIAPRYDQYK--DAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHP 170 (612)
Q Consensus 95 ~P~~~~GG~~~~~~~L~~~L~~~Gh--~V~vit~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~ 170 (612)
+|. .||++.++.+|+++|+++|| +|+|+|..++.-. ..+. .......+|++++++...
T Consensus 22 ~p~--~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~----------------~~~~~~~~gv~v~r~~~~ 83 (439)
T TIGR02472 22 DAD--TGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYA----------------QPIERIAPGARIVRLPFG 83 (439)
T ss_pred CCC--CCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccC----------------CCeeEeCCCcEEEEecCC
Confidence 354 89999999999999999998 9999997643210 1000 011233468888887432
Q ss_pred cccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHHHHHhh
Q 007212 171 WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTM 250 (612)
Q Consensus 171 ~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~~ 250 (612)
.. .+.. ..+-...+..+.....+.++... .+||| ||+|.|..++++..++..
T Consensus 84 ~~-----------~~~~-----~~~~~~~~~~~~~~l~~~~~~~~-----------~~~Dv-IH~h~~~~~~~~~~~~~~ 135 (439)
T TIGR02472 84 PR-----------RYLR-----KELLWPYLDELADNLLQHLRQQG-----------HLPDL-IHAHYADAGYVGARLSRL 135 (439)
T ss_pred CC-----------CCcC-----hhhhhhhHHHHHHHHHHHHHHcC-----------CCCCE-EEEcchhHHHHHHHHHHH
Confidence 10 0100 00001112234445555554432 14895 999999887777766654
Q ss_pred hcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHH
Q 007212 251 YKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQ 330 (612)
Q Consensus 251 ~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~ 330 (612)
.++|+|+|.|+...... ..+...++...... ..+. ....+.+++..++.+|.|+++|+...+
T Consensus 136 -------~~~p~V~t~H~~~~~~~---~~~~~~~~~~~~~~-----~~~~---~~~~~~~~~~~~~~ad~ii~~s~~~~~ 197 (439)
T TIGR02472 136 -------LGVPLIFTGHSLGREKR---RRLLAAGLKPQQIE-----KQYN---ISRRIEAEEETLAHASLVITSTHQEIE 197 (439)
T ss_pred -------hCCCEEEecccccchhh---hhcccCCCChhhhh-----hhcc---hHHHHHHHHHHHHhCCEEEECCHHHHH
Confidence 48899999996432110 00000011000000 0000 011234567789999999999987554
Q ss_pred HHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEc
Q 007212 331 ELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIG 410 (612)
Q Consensus 331 ~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iG 410 (612)
..... ..|++.+ ++.+||||+|.+.|.|.... ......+..+ ++++.+. +.++|+|+|
T Consensus 198 ~~~~~-~~~~~~~------ki~vIpnGvd~~~f~~~~~~------------~~~~~~~~~~-~~~~~~~--~~~~i~~vG 255 (439)
T TIGR02472 198 EQYAL-YDSYQPE------RMQVIPPGVDLSRFYPPQSS------------EETSEIDNLL-APFLKDP--EKPPILAIS 255 (439)
T ss_pred HHHHh-ccCCCcc------ceEEECCCcChhhcCCCCcc------------ccchhHHHHH-Hhhcccc--CCcEEEEEc
Confidence 43211 1244433 89999999999998775321 0001111222 3344433 347999999
Q ss_pred cCccccCHHHHHHHHHhccc--CCeEEE-EEecCCh--hH-------HHHHHHHHHH--CCCceEEEeccChHHHHHHHH
Q 007212 411 RLEEQKGSDILAAAIPHFIK--ENVQII-VLGTGKK--PM-------EKQLEQLEIL--YPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 411 rl~~~Kg~d~li~A~~~l~~--~~~~lv-ivG~g~~--~~-------~~~l~~l~~~--~~~~v~~~~~~~~~~~~~i~~ 476 (612)
|+.+.||++.|++|++.+.+ .+.+++ |+|+|+. .+ .+.+.++..+ +.+++.+.+.++.++++.+|+
T Consensus 256 rl~~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~ 335 (439)
T TIGR02472 256 RPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYR 335 (439)
T ss_pred CCcccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHH
Confidence 99999999999999986522 234443 5687652 11 1223444444 335677777777788888998
Q ss_pred hc----cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 477 GA----DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 477 ~a----Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
.| |++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+|+++ ++.|+++|+++|.++++
T Consensus 336 ~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv----------~~~d~~~la~~i~~ll~ 405 (439)
T TIGR02472 336 LAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLV----------DVLDLEAIASALEDALS 405 (439)
T ss_pred HHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHh
Confidence 77 99999999999999999999999999999999999999999999976 99999999999999999
Q ss_pred hhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
+ +..+.+|++++ +.++|||+.++++|+++++
T Consensus 406 ~--~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 406 D--SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred C--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 8 66667777766 5689999999999999863
No 14
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=1.5e-38 Score=342.88 Aligned_cols=364 Identities=19% Similarity=0.241 Sum_probs=258.5
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+.+|.|. .||.+.++.+|+++|+++||+|+|+++.++..... .....|++++
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---------------------~~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI---------------------RYLTNGLKVY 57 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc---------------------ccccCceeEE
Confidence 799999999997 89999999999999999999999999874321110 0112355555
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+........ ... . ++..+...+...++. .+||+ +|+|++.......
T Consensus 58 ~~p~~~~~~~-------~~~--------~----~~~~~~~~l~~~~~~-------------~~~Di-Ih~~~~~~~~~~~ 104 (398)
T cd03796 58 YLPFVVFYNQ-------STL--------P----TFFGTFPLLRNILIR-------------ERITI-VHGHQAFSALAHE 104 (398)
T ss_pred EecceeccCC-------ccc--------c----chhhhHHHHHHHHHh-------------cCCCE-EEECCCCchHHHH
Confidence 5532211100 000 0 001111222222222 25895 9999866554322
Q ss_pred --HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEe
Q 007212 246 --YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 246 --~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~ 323 (612)
.+.+. .++|+|++.|+... ... .... ....+++..++.+|.+++
T Consensus 105 ~~~~~~~-------~~~~~v~t~h~~~~-----~~~-----~~~~-----------------~~~~~~~~~~~~~d~ii~ 150 (398)
T cd03796 105 ALLHART-------MGLKTVFTDHSLFG-----FAD-----ASSI-----------------HTNKLLRFSLADVDHVIC 150 (398)
T ss_pred HHHHhhh-------cCCcEEEEeccccc-----ccc-----hhhH-----------------HhhHHHHHhhccCCEEEE
Confidence 22222 47899999996421 000 0000 011234566789999999
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
+|+...+.+... .+.+.+ ++.+||||+|.+.|.|...+ .+++.
T Consensus 151 ~s~~~~~~~~~~--~~~~~~------k~~vi~ngvd~~~f~~~~~~-----------------------------~~~~~ 193 (398)
T cd03796 151 VSHTSKENTVLR--ASLDPE------RVSVIPNAVDSSDFTPDPSK-----------------------------RDNDK 193 (398)
T ss_pred ecHhHhhHHHHH--hCCChh------hEEEEcCccCHHHcCCCccc-----------------------------CCCCc
Confidence 999988765421 333333 89999999999888765320 11355
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhcc
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
++|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ ..+.++++..++ .+++.+.+..+.+++..+++.||
T Consensus 194 ~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad 271 (398)
T cd03796 194 ITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP--KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGH 271 (398)
T ss_pred eEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc--hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 899999999999999999999998864 799999999987 445566666654 35688888888888889999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHH-H
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-A 558 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~-~ 558 (612)
++++||..|+||++++|||+||+|||+++.||..|++.++..++ .+.|+++++++|.+++++.... .
T Consensus 272 ~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~------------~~~~~~~l~~~l~~~l~~~~~~~~ 339 (398)
T cd03796 272 IFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILL------------AEPDVESIVRKLEEAISILRTGKH 339 (398)
T ss_pred EEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCceee------------cCCCHHHHHHHHHHHHhChhhhhh
Confidence 99999999999999999999999999999999999998864333 4458999999999999873222 2
Q ss_pred HHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 559 LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 559 ~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
..+.+++.+.++|||+.++++|.++|++++..
T Consensus 340 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 340 DPWSFHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 23334444789999999999999999998854
No 15
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=3.1e-38 Score=338.47 Aligned_cols=373 Identities=21% Similarity=0.284 Sum_probs=267.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++|+..|+|. ..||.+.++.+|+++|.++ |+|.|++...+.. ..+|+++
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~--------------------------~~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQRF--------------------------DSEGLTV 52 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCchh--------------------------cCCCeEE
Confidence 8999999999885 4599999999999999998 7888887652210 1123444
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+....+..... +... +..+.. .+...... .+||+ +|+|.|..++.+
T Consensus 53 ~~~~~~~~~~~-----------------~~~~---~~~~~~---~~~~~~~~----------~~~di-vh~~~~~~~~~~ 98 (388)
T TIGR02149 53 KGYRPWSELKE-----------------ANKA---LGTFSV---DLAMANDP----------VDADV-VHSHTWYTFLAG 98 (388)
T ss_pred EEecChhhccc-----------------hhhh---hhhhhH---HHHHhhCC----------CCCCe-EeecchhhhhHH
Confidence 33321110000 0000 001111 11111111 24795 999998887666
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
...+.. .++|+++++|+..+...+.... .+ .++ .....+.+..++.+|.++++
T Consensus 99 ~~~~~~-------~~~p~v~~~h~~~~~~~~~~~~---~~------------~~~-----~~~~~~~~~~~~~ad~vi~~ 151 (388)
T TIGR02149 99 HLAKKL-------YDKPLVVTAHSLEPLRPWKEEQ---LG------------GGY-----KLSSWAEKTAIEAADRVIAV 151 (388)
T ss_pred HHHHHh-------cCCCEEEEeecccccccccccc---cc------------cch-----hHHHHHHHHHHhhCCEEEEc
Confidence 555443 4899999999764322111000 00 000 00112346678899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+.+++.+.+.. .|...+ ++.+||||+|...|.|.. +..++++++++. +.+
T Consensus 152 S~~~~~~~~~~~-~~~~~~------~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~ 202 (388)
T TIGR02149 152 SGGMREDILKYY-PDLDPE------KVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDR--SRP 202 (388)
T ss_pred cHHHHHHHHHHc-CCCCcc------eEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCC--Cce
Confidence 999999887521 133323 899999999998887642 455778888864 448
Q ss_pred EEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC--hhHHHHHHHHHHHCCC---ceEEEe-ccChHHHHHHHHhc
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPE---KARGVA-KFNIPLAHMIIAGA 478 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~---~v~~~~-~~~~~~~~~i~~~a 478 (612)
+|+|+||+.+.||++.+++|++++. ++++++++|+|. ..+.+.+++....++. ++.+++ ..+.+++..+++.|
T Consensus 203 ~i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 203 YILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred EEEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhC
Confidence 9999999999999999999999984 578899988764 3455666666555432 355554 45778888999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCH------HHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV------AAVSTTVRRALA 552 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~------~~la~~i~~ll~ 552 (612)
|++|+||.+|++|++++|||+||+|||+|+.||..|++.++.+|+++ +++|+ ++++++|.++++
T Consensus 282 Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~~~~~~~l~~~i~~l~~ 351 (388)
T TIGR02149 282 EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLV----------PPDNSDADGFQAELAKAINILLA 351 (388)
T ss_pred CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc----------CCCCCcccchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999976 88887 999999999999
Q ss_pred hhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+ ++.+++|+.++ ..++|||+.++++|.++|++++
T Consensus 352 ~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 352 D--PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred C--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 8 66777777776 4688999999999999999763
No 16
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=2.6e-38 Score=347.79 Aligned_cols=376 Identities=18% Similarity=0.229 Sum_probs=266.4
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecC
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
+++|||+++.... |+...||.+.++.+|+++|.++||+|+|+++.... .+. ..|
T Consensus 56 ~~~mrI~~~~~~~-~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~-~~~------------------------~~g 109 (465)
T PLN02871 56 SRPRRIALFVEPS-PFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV-PQE------------------------FHG 109 (465)
T ss_pred CCCceEEEEECCc-CCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC-Ccc------------------------ccC
Confidence 6789999998643 33458999999999999999999999999986321 110 012
Q ss_pred ceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
++++.+.... . ..|.. ....+. +...+.+.++.. +||+ ||+|.....
T Consensus 110 ~~v~~~~~~~--~--------~~~~~--------~~~~~~-~~~~l~~~i~~~-------------kpDi-Ih~~~~~~~ 156 (465)
T PLN02871 110 AKVIGSWSFP--C--------PFYQK--------VPLSLA-LSPRIISEVARF-------------KPDL-IHASSPGIM 156 (465)
T ss_pred ceeeccCCcC--C--------ccCCC--------ceeecc-CCHHHHHHHHhC-------------CCCE-EEECCCchh
Confidence 2222110000 0 00000 000000 011223334433 4895 899874332
Q ss_pred ch-HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCE
Q 007212 242 LI-PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 242 ~~-~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~ 320 (612)
.. ...+.+. .++|+|++.|+....- .+ ...... . ......+++...+.+|.
T Consensus 157 ~~~~~~~ak~-------~~ip~V~~~h~~~~~~-~~-----~~~~~~-----------~----~~~~~~~~r~~~~~ad~ 208 (465)
T PLN02871 157 VFGALFYAKL-------LCVPLVMSYHTHVPVY-IP-----RYTFSW-----------L----VKPMWDIIRFLHRAADL 208 (465)
T ss_pred HHHHHHHHHH-------hCCCEEEEEecCchhh-hh-----cccchh-----------h----HHHHHHHHHHHHhhCCE
Confidence 22 2223332 4889999999643210 00 000000 0 00112335667789999
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 400 (612)
++++|+...+.+.+ .|... ..++.+||||+|.+.|.|... ...+++++....
T Consensus 209 ii~~S~~~~~~l~~---~~~~~-----~~kv~vi~nGvd~~~f~p~~~-------------------~~~~~~~~~~~~- 260 (465)
T PLN02871 209 TLVTSPALGKELEA---AGVTA-----ANRIRVWNKGVDSESFHPRFR-------------------SEEMRARLSGGE- 260 (465)
T ss_pred EEECCHHHHHHHHH---cCCCC-----cCeEEEeCCccCccccCCccc-------------------cHHHHHHhcCCC-
Confidence 99999999999986 33211 128999999999998877532 223344443221
Q ss_pred CCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 401 ~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
++.++|+|+||+.++||++.++++++++ ++++|+|+|+|+ +.+.++++.... ++.+.+..+.+++..+|+.||+
T Consensus 261 ~~~~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~~--~V~f~G~v~~~ev~~~~~~aDv 334 (465)
T PLN02871 261 PEKPLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP--YREELEKMFAGT--PTVFTGMLQGDELSQAYASGDV 334 (465)
T ss_pred CCCeEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh--HHHHHHHHhccC--CeEEeccCCHHHHHHHHHHCCE
Confidence 2458999999999999999999999987 689999999987 667777776653 4888888788888899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec---CcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 557 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 557 (612)
+|+||..|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ +++|+++++++|.+++++ ++
T Consensus 335 ~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~~ 402 (465)
T PLN02871 335 FVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLY----------TPGDVDDCVEKLETLLAD--PE 402 (465)
T ss_pred EEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEe----------CCCCHHHHHHHHHHHHhC--HH
Confidence 99999999999999999999999999999999999998 9999986 999999999999999998 67
Q ss_pred HHHHHHHHH--HHhhcCcHHHHHHHHH-HHHHHHHc
Q 007212 558 ALAEMMKNG--MAQDLSWKGPAKKWEE-TLLNLEVA 590 (612)
Q Consensus 558 ~~~~~~~~~--~~~~fsw~~~a~~~~~-~y~~l~~~ 590 (612)
.+.+|++++ ..++|||+.+++++++ +|+++...
T Consensus 403 ~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 403 LRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 777787777 3578999999999998 79988764
No 17
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=1.3e-37 Score=349.23 Aligned_cols=428 Identities=15% Similarity=0.156 Sum_probs=274.0
Q ss_pred CCceEEEEEeccc---Ccc----ccccHHHHhhchHHHH--------HhCCC----eEEEEEecCCccccccCccEEEEE
Q 007212 83 VGLNILFVGTEVA---PWS----KTGGLGDVLGGLPPAL--------AANGH----RVMTIAPRYDQYKDAWDTDVVIEL 143 (612)
Q Consensus 83 ~~MkIl~v~~~~~---P~~----~~GG~~~~~~~L~~~L--------~~~Gh----~V~vit~~~~~~~~~~~~~~~~~~ 143 (612)
+.|||++|+...+ |.. .+||...|+.+|+++| +++|| +|+|+|...+.... .+....++.
T Consensus 254 ~~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~-~~~~~~~e~ 332 (784)
T TIGR02470 254 MVFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG-TTCNQRLEK 332 (784)
T ss_pred ccceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc-ccccccccc
Confidence 3699999998762 211 2799999999999985 68999 77899976432110 000000000
Q ss_pred EeCCeeeEEEEEEeeecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhhH---HHHHHHHHHHHHhh-hhccCCC
Q 007212 144 KVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL---RFSLLCQAALEAPR-ILNLNSN 219 (612)
Q Consensus 144 ~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~---r~~~~~~~~~~~~~-~l~~~~~ 219 (612)
....+|+++++++....- ... -..|..... ....|...+.+.++ ...
T Consensus 333 ------------~~~~~~~~I~rvp~g~~~---------~~~----~~~~i~k~~l~p~l~~f~~~~~~~~~~~~~---- 383 (784)
T TIGR02470 333 ------------VYGTEHAWILRVPFRTEN---------GII----LRNWISRFEIWPYLETFAEDAEKEILAELQ---- 383 (784)
T ss_pred ------------ccCCCceEEEEecCCCCc---------ccc----cccccCHHHHHHHHHHHHHHHHHHHHHhcC----
Confidence 011235566655322100 000 001222221 12234444444333 222
Q ss_pred CccCCCCCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCC
Q 007212 220 KYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY 299 (612)
Q Consensus 220 ~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 299 (612)
++||+ ||+|.|..++++..++.. .++|.++|.|.+....... .....-.....+.
T Consensus 384 -------~~pDl-IHahy~d~glva~lla~~-------lgVP~v~t~HsL~~~K~~~-~g~~~~~~e~~~~--------- 438 (784)
T TIGR02470 384 -------GKPDL-IIGNYSDGNLVASLLARK-------LGVTQCTIAHALEKTKYPD-SDIYWQEFEDKYH--------- 438 (784)
T ss_pred -------CCCCE-EEECCCchHHHHHHHHHh-------cCCCEEEECCcchhhcccc-cccccccchhHHH---------
Confidence 35895 999999999999888876 4999999999764322110 0000000000000
Q ss_pred CCCcCCchhHHHHHHHhhCCEEEecCHHHHH----HHHc---Cc----------CCCccchhhhhccCeEEeeCCccCCC
Q 007212 300 NKPVRGRKINWMKAGILESDMVLTVSPHYAQ----ELVS---GE----------DKGVELDNIIRKTGIKGIVNGMDVQE 362 (612)
Q Consensus 300 ~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~----~l~~---~~----------~~G~~~~~~~~~~~i~vI~ngvd~~~ 362 (612)
....+......++.||.|||.|..... .+.+ .. ..|++. .+.++.+||+|+|...
T Consensus 439 ----~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~----~~~Ki~VVpPGVD~~i 510 (784)
T TIGR02470 439 ----FSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDV----FDPKFNIVSPGADESI 510 (784)
T ss_pred ----hhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccC----CcCCeEEECCCcChhh
Confidence 001122234678889999999975533 2211 00 012211 1238899999999998
Q ss_pred cCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEec
Q 007212 363 WNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGT 440 (612)
Q Consensus 363 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~ 440 (612)
|.|...+.-. .-....-.+....++.+.++.+|+..++++++|+++||++++||++.|++|+.++.. ++++|+|+|+
T Consensus 511 F~P~~~~~~r-~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGG 589 (784)
T TIGR02470 511 YFPYSDKEKR-LTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAG 589 (784)
T ss_pred cCCCCchhhh-hhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeC
Confidence 8775431000 000000001111234566788888766788999999999999999999999987643 5799999998
Q ss_pred CCh----------hHHHHHHHHHHHCC--CceEEEecc-ChHHHHHHH---H-hccEEEEcCCCCCCcHHHHHHHHcCCc
Q 007212 441 GKK----------PMEKQLEQLEILYP--EKARGVAKF-NIPLAHMII---A-GADFILIPSRFEPCGLIQLHAMRYGTV 503 (612)
Q Consensus 441 g~~----------~~~~~l~~l~~~~~--~~v~~~~~~-~~~~~~~i~---~-~aDv~v~pS~~E~~gl~~lEAma~G~P 503 (612)
+.. ...+.+.+++.+++ ++|.+.+.. +......++ + ++|++|+||++|+||++++|||+||+|
T Consensus 590 g~~~~~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlP 669 (784)
T TIGR02470 590 KLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLP 669 (784)
T ss_pred CcccccccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCC
Confidence 642 13456777777765 677776653 333332333 3 468999999999999999999999999
Q ss_pred eEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh--hCHHHHHHHHHHHH---HhhcCcHHHHH
Q 007212 504 PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGM---AQDLSWKGPAK 578 (612)
Q Consensus 504 vI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~--~~~~~~~~~~~~~~---~~~fsw~~~a~ 578 (612)
||+|+.||+.|+|.++.+|+++ ++.|+++++++|.++++. .+++.+.+++++++ .++|||+..++
T Consensus 670 VVAT~~GG~~EiV~dg~tGfLV----------dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~ 739 (784)
T TIGR02470 670 TFATRFGGPLEIIQDGVSGFHI----------DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSE 739 (784)
T ss_pred EEEcCCCCHHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999986 999999999999998741 12677888888874 58999999999
Q ss_pred HHHHHH
Q 007212 579 KWEETL 584 (612)
Q Consensus 579 ~~~~~y 584 (612)
+++++.
T Consensus 740 ~ll~l~ 745 (784)
T TIGR02470 740 RLLTLA 745 (784)
T ss_pred HHHHHH
Confidence 999876
No 18
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.2e-36 Score=323.53 Aligned_cols=365 Identities=24% Similarity=0.238 Sum_probs=259.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++. |. .||.+.++.+|+++|+++||+|+|++...+...... ..++.+
T Consensus 1 mki~~~~~---p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~-----------------------~~~~~~ 52 (371)
T cd04962 1 MKIGIVCY---PT--YGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY-----------------------SPNIFF 52 (371)
T ss_pred CceeEEEE---eC--CCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh-----------------------ccCeEE
Confidence 89999973 43 799999999999999999999999997532111100 011222
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+.++.+.+.. + ....| .......+.+.++.. +||+ +|+|.+.....+
T Consensus 53 ~~~~~~~~~~--~---~~~~~--------------~~~~~~~l~~~i~~~-------------~~di-vh~~~~~~~~~~ 99 (371)
T cd04962 53 HEVEVPQYPL--F---QYPPY--------------DLALASKIAEVAKRY-------------KLDL-LHVHYAVPHAVA 99 (371)
T ss_pred EEecccccch--h---hcchh--------------HHHHHHHHHHHHhcC-------------CccE-EeecccCCccHH
Confidence 1111111000 0 00000 011223333444332 4895 899976655444
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
.++....... .++|+++++|+....- .+.. .....+.+..++.+|.++++
T Consensus 100 ~~~~~~~~~~---~~~~~i~~~h~~~~~~---------~~~~------------------~~~~~~~~~~~~~~d~ii~~ 149 (371)
T cd04962 100 AYLAREILGK---KDLPVVTTLHGTDITL---------VGQD------------------PSFQPATRFSIEKSDGVTAV 149 (371)
T ss_pred HHHHHHhcCc---CCCcEEEEEcCCcccc---------cccc------------------ccchHHHHHHHhhCCEEEEc
Confidence 4444322110 2789999999643210 0000 01123456778899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+...+.+.+. ++ . ..++.+||||+|...+.+.. +...+++++++. +.+
T Consensus 150 s~~~~~~~~~~--~~-~------~~~i~vi~n~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~ 198 (371)
T cd04962 150 SESLRQETYEL--FD-I------TKEIEVIPNFVDEDRFRPKP--------------------DEALKRRLGAPE--GEK 198 (371)
T ss_pred CHHHHHHHHHh--cC-C------cCCEEEecCCcCHhhcCCCc--------------------hHHHHHhcCCCC--CCe
Confidence 99999988752 11 1 22899999999987776543 234556777764 347
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
+++|+||+.+.||++.+++|++.+.+ .+++|+++|+|+ ..+.++++..+.+ +++.+.+.. +.+..+++.||++
T Consensus 199 ~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~~ 274 (371)
T cd04962 199 VLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP--ERSPAERLARELGLQDDVLFLGKQ--DHVEELLSIADLF 274 (371)
T ss_pred EEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc--CHHHHHHHHHHcCCCceEEEecCc--ccHHHHHHhcCEE
Confidence 89999999999999999999999866 579999999987 3445566655543 457776643 3466899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
++||.+|++|++++|||++|+|||+|+.||..|++.++.+|+++ +++|+++++++|.+++++ ++.+.+
T Consensus 275 v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~ 342 (371)
T cd04962 275 LLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLV----------DVGDVEAMAEYALSLLED--DELWQE 342 (371)
T ss_pred EeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEc----------CCCCHHHHHHHHHHHHhC--HHHHHH
Confidence 99999999999999999999999999999999999999999976 899999999999999987 667777
Q ss_pred HHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 562 MMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 562 ~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
|++++ +.++|||+.++++|.++|+++
T Consensus 343 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 343 FSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 77766 368999999999999999864
No 19
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.4e-36 Score=325.36 Aligned_cols=362 Identities=17% Similarity=0.263 Sum_probs=262.2
Q ss_pred ceEEEEEecccCc--cccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007212 85 LNILFVGTEVAPW--SKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P~--~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
-||+|++++-.|. ...||++.++.++++.|+. +|+++|-..+.+++. +...+|+
T Consensus 3 ~~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~---------------------~~~~~~~ 58 (380)
T PRK15484 3 DKIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEY---------------------TKVNDNC 58 (380)
T ss_pred ceEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCch---------------------hhccCCC
Confidence 4899998774443 4689999999999999953 999999886544442 0122456
Q ss_pred eEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
.++++..+..+.+..+ +.+. - +...+.+..+..+..... .++| |||+|+... +
T Consensus 59 ~~~~~~~~~~~~~~~~----~~~~---------~--~~~~~~~~~~~~~~~~~~----------~~~~-vi~v~~~~~-~ 111 (380)
T PRK15484 59 DIHYIGFSRIYKRLFQ----KWTR---------L--DPLPYSQRILNIAHKFTI----------TKDS-VIVIHNSMK-L 111 (380)
T ss_pred ceEEEEeccccchhhh----hhhc---------c--CchhHHHHHHHHHHhcCC----------CCCc-EEEEeCcHH-h
Confidence 6666633222111000 0000 0 011122223333322211 1357 589987322 1
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
. ..++.. +.++|+++++|+... ...+..++.++
T Consensus 112 ~-~~~~~~------~~~~~~v~~~h~~~~----------------------------------------~~~~~~~~~ii 144 (380)
T PRK15484 112 Y-RQIRER------APQAKLVMHMHNAFE----------------------------------------PELLDKNAKII 144 (380)
T ss_pred H-HHHHhh------CCCCCEEEEEecccC----------------------------------------hhHhccCCEEE
Confidence 1 222222 157899999995311 11244679999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
++|+..++.+.+. + + ..++.+||||+|...|.+.. +..++++++++.+
T Consensus 145 ~~S~~~~~~~~~~---~-~------~~~i~vIpngvd~~~~~~~~--------------------~~~~~~~~~~~~~-- 192 (380)
T PRK15484 145 VPSQFLKKFYEER---L-P------NADISIVPNGFCLETYQSNP--------------------QPNLRQQLNISPD-- 192 (380)
T ss_pred EcCHHHHHHHHhh---C-C------CCCEEEecCCCCHHHcCCcc--------------------hHHHHHHhCCCCC--
Confidence 9999999988752 1 1 22799999999988876642 3456677887643
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCC-------hhHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-------KPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~-------~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 473 (612)
.++|+|+||+.+.||++.|++|++++.+ ++++|+|+|+|. ..+.+.+++++.+++.++.+.+..+.+++..
T Consensus 193 ~~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~ 272 (380)
T PRK15484 193 ETVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHN 272 (380)
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHH
Confidence 4789999999999999999999999865 789999999875 2356677788777777788888888888889
Q ss_pred HHHhccEEEEcCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 474 IIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 474 i~~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
+|+.||++++||.+ |+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++++++|.++++
T Consensus 273 ~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l---------~~~~d~~~la~~I~~ll~ 343 (380)
T PRK15484 273 YYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHL---------AEPMTSDSIISDINRTLA 343 (380)
T ss_pred HHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEE---------eCCCCHHHHHHHHHHHHc
Confidence 99999999999986 99999999999999999999999999999999999953 478999999999999999
Q ss_pred hhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+ ++ +.++++++ +.++|||+.++++|+++|++..
T Consensus 344 d--~~-~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 344 D--PE-LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred C--HH-HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 8 33 24566655 5789999999999999998754
No 20
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=1.7e-36 Score=327.23 Aligned_cols=275 Identities=20% Similarity=0.231 Sum_probs=220.1
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+ ||+|.++.+.+...++.... .+.|++++.|+...... .. ....
T Consensus 118 ~~di-ihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~~---------~~------------------~~~~ 164 (406)
T PRK15427 118 VADV-FIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISSR---------EV------------------LNHY 164 (406)
T ss_pred CCCE-EEEcCChHHHHHHHHHHhCC-----CCCCeEEEEcccccccc---------hh------------------hhhh
Confidence 4895 99998877766666654211 24467889996432100 00 0001
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHH
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..+++..++++|.++++|+..++.+.+ +|++.+ ++.+||||+|.+.|.+....
T Consensus 165 ~~~~~~~~~~ad~vv~~S~~~~~~l~~---~g~~~~------ki~vi~nGvd~~~f~~~~~~------------------ 217 (406)
T PRK15427 165 TPEYQQLFRRGDLMLPISDLWAGRLQK---MGCPPE------KIAVSRMGVDMTRFSPRPVK------------------ 217 (406)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCHH------HEEEcCCCCCHHHcCCCccc------------------
Confidence 124566788999999999999999986 576655 89999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEE
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGV 463 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~ 463 (612)
...+.+.|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ .++.++++..+++ +++.+.
T Consensus 218 -----------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~~ 284 (406)
T PRK15427 218 -----------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEMP 284 (406)
T ss_pred -----------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEEe
Confidence 01234689999999999999999999999975 689999999998 5667777776654 568888
Q ss_pred eccChHHHHHHHHhccEEEEcCCC------CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCC
Q 007212 464 AKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~ 537 (612)
+..+.+++..+++.||++|+||.. |++|++++|||+||+|||+|+.||++|++.++.+|+++ ++
T Consensus 285 G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv----------~~ 354 (406)
T PRK15427 285 GFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV----------PE 354 (406)
T ss_pred CCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe----------CC
Confidence 888888888999999999999974 99999999999999999999999999999999999976 99
Q ss_pred CCHHHHHHHHHHHHH-hhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 538 VDVAAVSTTVRRALA-TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 538 ~d~~~la~~i~~ll~-~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
+|+++|+++|.++++ + ++.+.+|++++ +.++|+|+..++++.++|+++
T Consensus 355 ~d~~~la~ai~~l~~~d--~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 355 NDAQALAQRLAAFSQLD--TDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 999999999999999 7 56667777766 579999999999999999863
No 21
>PLN00142 sucrose synthase
Probab=100.00 E-value=2.6e-36 Score=338.82 Aligned_cols=323 Identities=17% Similarity=0.191 Sum_probs=223.1
Q ss_pred CCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCc
Q 007212 227 GKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 227 ~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+.||+ ||+|+|..++++..++... ++|+|+|.|.+.-.... .....+-.....+ .. . .
T Consensus 407 ~~PDl-IHaHYwdsg~vA~~La~~l-------gVP~v~T~HsL~k~K~~-~~~~~~~~~e~~y----------~~--~-~ 464 (815)
T PLN00142 407 GKPDL-IIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKYP-DSDIYWKKFDDKY----------HF--S-C 464 (815)
T ss_pred CCCCE-EEECCccHHHHHHHHHHHh-------CCCEEEEcccchhhhcc-ccCCcccccchhh----------hh--h-h
Confidence 35895 9999999999999999874 99999999977532211 0000000001110 00 0 1
Q ss_pred hhHHHHHHHhhCCEEEecCHHHHHHH-------HcCcCCCcc-chhhh-----hccCeEEeeCCccCCCcCCCccc--cc
Q 007212 307 KINWMKAGILESDMVLTVSPHYAQEL-------VSGEDKGVE-LDNII-----RKTGIKGIVNGMDVQEWNPLTDK--YI 371 (612)
Q Consensus 307 ~~~~~k~~l~~ad~vi~vS~~~~~~l-------~~~~~~G~~-~~~~~-----~~~~i~vI~ngvd~~~~~p~~~~--~~ 371 (612)
.+......+..||.||+.|......+ .+...++.+ +..++ -..++.+|++|+|...|.|...+ .+
T Consensus 465 r~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl 544 (815)
T PLN00142 465 QFTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRL 544 (815)
T ss_pred chHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhH
Confidence 23345668889999999998776422 221111111 00000 02288999999999999875421 00
Q ss_pred ccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecC-Ch-----
Q 007212 372 GVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTG-KK----- 443 (612)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g-~~----- 443 (612)
..-++. .+....++...++.+|+..++++++|+++||+.++||++.|++|+.++.+ ++++|+|+|++ ++
T Consensus 545 ~~l~n~---I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d 621 (815)
T PLN00142 545 TSLHPS---IEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKD 621 (815)
T ss_pred Hhhccc---chhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCcccccccc
Confidence 000000 01112233445567887666677899999999999999999999998754 57999999987 21
Q ss_pred -hH---HHHHHHHHHHCC--CceEEEeccC----hHHHHHHHH-hccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCc
Q 007212 444 -PM---EKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 512 (612)
Q Consensus 444 -~~---~~~l~~l~~~~~--~~v~~~~~~~----~~~~~~i~~-~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~ 512 (612)
+. .+.+.+++.+++ +++.+.+... .+.+..+++ ++|++|+||.+|+||++++|||+||+|||+|+.||+
T Consensus 622 ~ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~ 701 (815)
T PLN00142 622 REEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGP 701 (815)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCH
Confidence 11 244666666654 5677665432 234444555 579999999999999999999999999999999999
Q ss_pred ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh--hCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHH
Q 007212 513 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNG---MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 513 ~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~--~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y 584 (612)
.|+|.+|.+|+++ ++.|+++++++|.++++. .+++.+.+|++++ +.++|||+.++++++++.
T Consensus 702 ~EIV~dG~tG~LV----------~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 702 AEIIVDGVSGFHI----------DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999986 999999999999876631 1267888888887 357899999999999865
No 22
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=8.6e-35 Score=311.86 Aligned_cols=381 Identities=23% Similarity=0.290 Sum_probs=266.9
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
.+++++.+...+|. .||.+.++.+|+++|+++||+|+|+++..+...... ....+|+.
T Consensus 6 ~~~~~~~~~~~~~~--~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--------------------~~~~~~~~ 63 (398)
T cd03800 6 SLHGSPLAQPGGAD--TGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI--------------------VELAPGVR 63 (398)
T ss_pred eccccccccCCCCC--CCceeehHHHHHHHHhccCceEEEEEecCCcccCCc--------------------cccccceE
Confidence 35555555544454 799999999999999999999999997643211100 11123555
Q ss_pred EEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccch
Q 007212 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~ 243 (612)
++.+....... + . . ......+..+...+...++... .+||+ ||+|.+..+..
T Consensus 64 ~~~~~~~~~~~----------~-~--~---~~~~~~~~~~~~~~~~~~~~~~-----------~~~Di-v~~~~~~~~~~ 115 (398)
T cd03800 64 VVRVPAGPAEY----------L-P--K---EELWPYLDEFADDLLRFLRREG-----------GRPDL-IHAHYWDSGLV 115 (398)
T ss_pred EEecccccccC----------C-C--h---hhcchhHHHHHHHHHHHHHhcC-----------CCccE-EEEecCccchH
Confidence 55543211100 0 0 0 0000011123444444444321 14895 89998888877
Q ss_pred HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEe
Q 007212 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~ 323 (612)
+..++.. .++|+|++.|+........ ...... .........++..++.+|.+++
T Consensus 116 ~~~~~~~-------~~~~~i~~~h~~~~~~~~~------~~~~~~-------------~~~~~~~~~~~~~~~~ad~ii~ 169 (398)
T cd03800 116 ALLLARR-------LGIPLVHTFHSLGAVKRRH------LGAADT-------------YEPARRIEAEERLLRAADRVIA 169 (398)
T ss_pred HHHHHhh-------cCCceEEEeecccccCCcc------cccccc-------------cchhhhhhHHHHHHhhCCEEEE
Confidence 7766654 4899999999654311100 000000 0001122345667889999999
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
+|+...+.+.+. ++.. ..++.+|+||+|.+.|.+... ....+++.+.+. +.
T Consensus 170 ~s~~~~~~~~~~--~~~~------~~~~~vi~ng~~~~~~~~~~~-------------------~~~~~~~~~~~~--~~ 220 (398)
T cd03800 170 STPQEAEELYSL--YGAY------PRRIRVVPPGVDLERFTPYGR-------------------AEARRARLLRDP--DK 220 (398)
T ss_pred cCHHHHHHHHHH--cccc------ccccEEECCCCCccceecccc-------------------hhhHHHhhccCC--CC
Confidence 999998888752 2222 126899999999988866532 111144444443 45
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChh----HHHHHHHHHHHCC--CceEEEeccChHHHHHHH
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EKARGVAKFNIPLAHMII 475 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~ 475 (612)
++|+|+||+.+.||++.+++|+..+.+ ++++|+++|++... ....++++...++ +++.+.+..+.+++..++
T Consensus 221 ~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 300 (398)
T cd03800 221 PRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALY 300 (398)
T ss_pred cEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHH
Confidence 899999999999999999999999975 68999999987632 2344555555543 568888888888888999
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
+.||++++||..|++|++++|||++|+|||+++.+|..|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 301 ~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~-- 368 (398)
T cd03800 301 RAADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLV----------DPRDPEALAAALRRLLTD-- 368 (398)
T ss_pred HhCCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEe----------CCCCHHHHHHHHHHHHhC--
Confidence 99999999999999999999999999999999999999999999999987 899999999999999998
Q ss_pred HHHHHHHHHHHH---HhhcCcHHHHHHHH
Q 007212 556 TQALAEMMKNGM---AQDLSWKGPAKKWE 581 (612)
Q Consensus 556 ~~~~~~~~~~~~---~~~fsw~~~a~~~~ 581 (612)
++.+.++++++. .++|||+.++++|+
T Consensus 369 ~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 369 PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 667777777763 48999999999986
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=2.5e-34 Score=309.85 Aligned_cols=228 Identities=15% Similarity=0.172 Sum_probs=182.7
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
...+..+|.++++|+..++.+.+. + ..++.+||||+|.+.|.|.... ....
T Consensus 151 ~~~~~~ad~vi~~s~~~~~~~~~~--~---------~~ki~vI~ngvd~~~f~~~~~~------------------~~~~ 201 (396)
T cd03818 151 LLALAQADAGVSPTRWQRSTFPAE--L---------RSRISVIHDGIDTDRLRPDPQA------------------RLRL 201 (396)
T ss_pred HHHHHhCCEEECCCHHHHhhCcHh--h---------ccceEEeCCCccccccCCCchh------------------hhcc
Confidence 456889999999999999987641 1 1289999999999998775321 1111
Q ss_pred HHHhCCCCCCCCcEEEEEcc-CccccCHHHHHHHHHhccc--CCeEEEEEecCCh-----------hHHHHHHHHHHHC-
Q 007212 392 QAEVGLPVDRNIPVIGFIGR-LEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-----------PMEKQLEQLEILY- 456 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGr-l~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~-----------~~~~~l~~l~~~~- 456 (612)
+...++. ++.++|+|+|| +.++||++.+++|++.+.+ ++++|+|+|++.. ..++.++++....
T Consensus 202 ~~~~~~~--~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 279 (396)
T cd03818 202 PNGRVLT--PGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLD 279 (396)
T ss_pred cccccCC--CCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccC
Confidence 2222222 24579999998 9999999999999999865 7999999997421 1233445554322
Q ss_pred CCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCC
Q 007212 457 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 457 ~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~ 536 (612)
.+++.+.+..+.+++..+|+.||++++||..|++|++++|||+||+|||+|+.||+.|++.++.+|+++ +
T Consensus 280 ~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv----------~ 349 (396)
T cd03818 280 LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLV----------D 349 (396)
T ss_pred cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEc----------C
Confidence 256888888888888899999999999999999999999999999999999999999999999999976 9
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHH
Q 007212 537 PVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 537 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~ 582 (612)
+.|+++++++|.+++++ ++.+.+|++++ +.++|||+.++++|++
T Consensus 350 ~~d~~~la~~i~~ll~~--~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 350 FFDPDALAAAVIELLDD--PARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred CCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 99999999999999998 56666777666 4577999999999863
No 24
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=2e-34 Score=324.68 Aligned_cols=475 Identities=20% Similarity=0.261 Sum_probs=354.3
Q ss_pred eEEEEEecccCc----cccccHHHHhhchHHHHHhCCCeEEEEEecCCc-cc------cc--------cC-------c--
Q 007212 86 NILFVGTEVAPW----SKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK------DA--------WD-------T-- 137 (612)
Q Consensus 86 kIl~v~~~~~P~----~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~-~~------~~--------~~-------~-- 137 (612)
-+++.+.||+=. ...||+|...+...++++..|...+-++..|.+ |. +. |+ .
T Consensus 87 ~~aYFs~E~gl~~~lpiYsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~~ 166 (778)
T cd04299 87 VAAYFSMEFGLHESLPIYSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPVR 166 (778)
T ss_pred eeEEeccccccCCCCCccCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEEe
Confidence 344887765422 258999999999999999999999999876541 11 11 21 1
Q ss_pred -----cEEEEEEeCCeeeEEEEEEeeecCceEEEEeCccccccccCCCCC-cccCCCCCCCCchhhHH---HHHHHHHHH
Q 007212 138 -----DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQS-KIYGPRTGEDYQDNQLR---FSLLCQAAL 208 (612)
Q Consensus 138 -----~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~~~-~~y~~~~g~~~~~~~~r---~~~~~~~~~ 208 (612)
...+.+.+.++...++.+.....+|+++++|++..-...|.+... .+|++ |+..| +.+|+.+++
T Consensus 167 ~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~~~~R~iT~~LYg~-------D~~~Rl~Qe~~Lg~agl 239 (778)
T cd04299 167 DADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENSPDDRGITDRLYGG-------DQETRIQQEILLGIGGV 239 (778)
T ss_pred cCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccchhhcccccCCCCC-------cHHHHHHHHHHHHHHHH
Confidence 235677788888889999988899999999998753333433322 47863 35566 589999999
Q ss_pred HHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCccc--ccCcc
Q 007212 209 EAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFE 278 (612)
Q Consensus 209 ~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~ 278 (612)
++++.+++ +||| ||+||||+++++..+.+ +.+..|+ ..+..++||+|++.++| .|+..
T Consensus 240 ~~Lr~lg~-----------~pdV-iH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~ 307 (778)
T cd04299 240 RALRALGI-----------KPTV-YHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPD 307 (778)
T ss_pred HHHHHhCC-----------CCeE-EEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHH
Confidence 99998865 4895 99999999999993222 1111111 12578999999999999 89877
Q ss_pred cccc--------cCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHH---HHHHHcCcCCCccchhhhh
Q 007212 279 DFGL--------LNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY---AQELVSGEDKGVELDNIIR 347 (612)
Q Consensus 279 ~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~---~~~l~~~~~~G~~~~~~~~ 347 (612)
.+.. ++++......+.....-. ....+++++.++..|+.+.+||+-+ .+++......|.+.+
T Consensus 308 l~~~~~~~~~~~lgl~~~~~~~lg~e~~~~---~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~---- 380 (778)
T cd04299 308 LVERYFGPYARELGLSRDRFLALGRENPGD---DPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVE---- 380 (778)
T ss_pred HHHHHhhHHHHHcCCCHHHHhhhccccccC---ccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcc----
Confidence 6632 566554322221111000 0135799999999999999999988 555443223344332
Q ss_pred ccCeEEeeCCccCCCcC-CCcccccccccC---------------------cchhhhccHHHHHHHHHHh----------
Q 007212 348 KTGIKGIVNGMDVQEWN-PLTDKYIGVKYD---------------------ASTVMDAKPLLKEALQAEV---------- 395 (612)
Q Consensus 348 ~~~i~vI~ngvd~~~~~-p~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~---------- 395 (612)
..+|..|.||||...|. |..++.+ .+|. ......+|..+|.+|.+.+
T Consensus 381 ~~~i~~ITNGVh~~~W~~P~~~~l~-~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~ 459 (778)
T cd04299 381 EVPIGHVTNGVHVPTWVAPEMRELY-DRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLR 459 (778)
T ss_pred cCceeceeCCcchhhhcCHHHHHHH-HHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 33799999999999998 7665544 3331 2234467778888776664
Q ss_pred -----------CCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC------hhHHHHHHHH
Q 007212 396 -----------GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQL 452 (612)
Q Consensus 396 -----------gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~------~~~~~~l~~l 452 (612)
+.+.+++.++|+|++|+.++||.+++++.+..+.+ .++|||++|.+. +.+.+.+.++
T Consensus 460 ~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~ 539 (778)
T cd04299 460 RGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEF 539 (778)
T ss_pred cCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHH
Confidence 55667788999999999999999999999888744 479999999987 5677899999
Q ss_pred HH--HCCCceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEeccc
Q 007212 453 EI--LYPEKARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF 528 (612)
Q Consensus 453 ~~--~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~ 528 (612)
+. .+++++.++..|+..+++.++++||++++||+ +|+||++.+-||..|.+-+++-.|...|.. ++.|||.||.-
T Consensus 540 a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 540 SRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred HhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 88 66789999999999999999999999999999 899999999999999999999999999987 78999999852
Q ss_pred cc--ccccCCCCCHHHHHHHHHHHHH-hh-C------HHHHHHHHHHHHHh---hcCcHHHHHHHHH-HHHHHH
Q 007212 529 SV--DCEAVDPVDVAAVSTTVRRALA-TY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEE-TLLNLE 588 (612)
Q Consensus 529 ~~--~~~~v~~~d~~~la~~i~~ll~-~~-~------~~~~~~~~~~~~~~---~fsw~~~a~~~~~-~y~~l~ 588 (612)
.. |.+.-|..|.++|.+.|++.+- .+ + +..+.+|.++++.. .|||.+++++|.+ +|.-+.
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y~p~~ 692 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFYLPAA 692 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhHHHHH
Confidence 21 3334455788888899976544 22 1 45799999999877 9999999999887 454443
No 25
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=1.3e-34 Score=309.30 Aligned_cols=230 Identities=20% Similarity=0.226 Sum_probs=184.4
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
....+|.++++|+..++.+.+. +|++.+ ++.+|+||+|.+.|.|.... +...++
T Consensus 133 ~~~~~~~~i~vs~~~~~~~~~~--~~~~~~------~~~vi~ngvd~~~~~~~~~~------------------~~~~~~ 186 (374)
T TIGR03088 133 YRPLIHHYVAVSRDLEDWLRGP--VKVPPA------KIHQIYNGVDTERFHPSRGD------------------RSPILP 186 (374)
T ss_pred HHhcCCeEEEeCHHHHHHHHHh--cCCChh------hEEEeccCccccccCCCccc------------------hhhhhH
Confidence 3456899999999999988752 455433 89999999999888765311 112222
Q ss_pred HhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEec
Q 007212 394 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAK 465 (612)
Q Consensus 394 ~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~ 465 (612)
+...+ ++.++|+|+||+.++||++.+++|++++.+ ++++|+++|+|+ ..+.++++...++ +.+.+.+
T Consensus 187 ~~~~~--~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g- 261 (374)
T TIGR03088 187 PDFFA--DESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP--ARGACEQMVRAAGLAHLVWLPG- 261 (374)
T ss_pred hhcCC--CCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc--hHHHHHHHHHHcCCcceEEEcC-
Confidence 22233 245899999999999999999999998854 278999999987 4456666666554 3344433
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHH
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~ 545 (612)
+ .++...+++.||++++||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ +++|++++++
T Consensus 262 ~-~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~----------~~~d~~~la~ 330 (374)
T TIGR03088 262 E-RDDVPALMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALV----------PPGDAVALAR 330 (374)
T ss_pred C-cCCHHHHHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEe----------CCCCHHHHHH
Confidence 3 3456689999999999999999999999999999999999999999999999999987 8999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
+|.+++++ ++.+.++++++ +.++|||+.++++|+++|+++
T Consensus 331 ~i~~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 331 ALQPYVSD--PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 99999987 55666666665 468999999999999999876
No 26
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=3.2e-34 Score=300.16 Aligned_cols=330 Identities=18% Similarity=0.204 Sum_probs=236.9
Q ss_pred ceEEEEEecccC--ccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007212 85 LNILFVGTEVAP--WSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P--~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
|||++|++++.| ....||.+.++.+|+++|.++||+|+++++........ .. .
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-----------------~~--~------ 55 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP-----------------LV--P------ 55 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc-----------------ee--e------
Confidence 899999998744 23489999999999999999999999999863321110 00 0
Q ss_pred eEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
. ........ +...............+.++.. +||+ ||+|.+....
T Consensus 56 -~--~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~-------------~~Di-vh~~~~~~~~ 100 (335)
T cd03802 56 -V--VPEPLRLD------------------APGRDRAEAEALALAERALAAG-------------DFDI-VHNHSLHLPL 100 (335)
T ss_pred -c--cCCCcccc------------------cchhhHhhHHHHHHHHHHHhcC-------------CCCE-EEecCcccch
Confidence 0 00000000 0000111112222233333332 4895 8999877766
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
. +... .+.|+++++|+...... ..........+.++
T Consensus 101 ~---~~~~-------~~~~~v~~~h~~~~~~~----------------------------------~~~~~~~~~~~~~~ 136 (335)
T cd03802 101 P---FARP-------LPVPVVTTLHGPPDPEL----------------------------------LKLYYAARPDVPFV 136 (335)
T ss_pred h---hhcc-------cCCCEEEEecCCCCccc----------------------------------chHHHhhCcCCeEE
Confidence 5 2221 48899999996543110 01233456788999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
++|+...+.+.. . .++.+||||+|.+.|.+.. .+
T Consensus 137 ~~s~~~~~~~~~---~----------~~~~vi~ngvd~~~~~~~~---------------------------------~~ 170 (335)
T cd03802 137 SISDAQRRPWPP---L----------PWVATVHNGIDLDDYPFRG---------------------------------PK 170 (335)
T ss_pred EecHHHHhhccc---c----------cccEEecCCcChhhCCCCC---------------------------------CC
Confidence 999999887764 1 2899999999998886532 13
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChh--HHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKP--MEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~--~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
...|+|+||+.+.||++.++++++.. +++|+|+|.|+.. ....+.+... ..+++.+.+..+.+++..+++.+|+
T Consensus 171 ~~~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~~~~~~~~~~~~~~-~~~~v~~~G~~~~~~~~~~~~~~d~ 246 (335)
T cd03802 171 GDYLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSDPDYFYREIAPELL-DGPDIEYLGEVGGAEKAELLGNARA 246 (335)
T ss_pred CCEEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCCHHHHHHHHHHhcc-cCCcEEEeCCCCHHHHHHHHHhCcE
Confidence 46899999999999999999998764 7999999998621 1222222211 2467999998888888899999999
Q ss_pred EEEcCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007212 481 ILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 481 ~v~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 559 (612)
+++||.+ |+||++++|||+||+|||+++.||..|++.++.+|+++ ++ +++++++|.++++. .
T Consensus 247 ~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~----------~~--~~~l~~~l~~l~~~--~--- 309 (335)
T cd03802 247 LLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLV----------DS--VEELAAAVARADRL--D--- 309 (335)
T ss_pred EEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEe----------CC--HHHHHHHHHHHhcc--H---
Confidence 9999985 99999999999999999999999999999999999986 54 99999999998764 2
Q ss_pred HHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 560 AEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 560 ~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
.+.+++...++|||+.++++|+++|+
T Consensus 310 ~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 310 RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 12334446799999999999999984
No 27
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=7.8e-35 Score=312.90 Aligned_cols=380 Identities=14% Similarity=0.087 Sum_probs=238.4
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCC-CeEEEEEecCCccccc--cCccEEEEEEeCCeeeEEEEEEee
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPRYDQYKDA--WDTDVVIELKVGDKIEKVRFFHCH 158 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G-h~V~vit~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 158 (612)
.++|||++++..|.|| .+|+...+..++..|+++| |+|+||+|.++...+. |.. ++......+...+.+ .
T Consensus 2 ~~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~----~~~f~~~~~~e~~~~-~ 74 (462)
T PLN02846 2 QKKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPN----KITFSSPSEQEAYVR-Q 74 (462)
T ss_pred CCCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccc----cccccCchhhhhhhh-h
Confidence 3579999999999999 9999999999999999999 8999999987532110 100 000000000000000 0
Q ss_pred ecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhh---HHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEe
Q 007212 159 KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQ---LRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVA 235 (612)
Q Consensus 159 ~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~---~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~ 235 (612)
..+-+++++....+ ..| .+.. .+.......+.+.++.+ +||+ ||+
T Consensus 75 ~~~~~v~r~~s~~~----------p~y--------p~r~~~~~r~~~~~~~i~~~l~~~-------------~pDV-IHv 122 (462)
T PLN02846 75 WLEERISFLPKFSI----------KFY--------PGKFSTDKRSILPVGDISETIPDE-------------EADI-AVL 122 (462)
T ss_pred hccCeEEEeccccc----------ccC--------cccccccccccCChHHHHHHHHhc-------------CCCE-EEE
Confidence 00112222221111 011 1100 11111223344445443 4895 888
Q ss_pred CC-CcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHH
Q 007212 236 ND-WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG 314 (612)
Q Consensus 236 h~-~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 314 (612)
|+ ++.+.+..-.+... +-.++|.+.|.... .- +...+. +.... ....++...
T Consensus 123 ~tP~~LG~~~~g~~~~~------k~~~vV~tyHT~y~-~Y-----~~~~~~------------g~~~~---~l~~~~~~~ 175 (462)
T PLN02846 123 EEPEHLTWYHHGKRWKT------KFRLVIGIVHTNYL-EY-----VKREKN------------GRVKA---FLLKYINSW 175 (462)
T ss_pred cCchhhhhHHHHHHHHh------cCCcEEEEECCChH-HH-----HHHhcc------------chHHH---HHHHHHHHH
Confidence 85 44444311111111 12348889996221 00 000000 00000 011111122
Q ss_pred H--hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 315 I--LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 315 l--~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
+ ..+|.++++|....+ +.. .+...++|||.+.|.|... ..+
T Consensus 176 ~~r~~~d~vi~pS~~~~~-l~~---------------~~i~~v~GVd~~~f~~~~~---------------------~~~ 218 (462)
T PLN02846 176 VVDIYCHKVIRLSAATQD-YPR---------------SIICNVHGVNPKFLEIGKL---------------------KLE 218 (462)
T ss_pred HHHHhcCEEEccCHHHHH-Hhh---------------CEEecCceechhhcCCCcc---------------------cHh
Confidence 2 248999999986655 443 3344568999998887632 122
Q ss_pred HHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHH
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 470 (612)
+..+ +.+.-.+.++|+|||.++||++.|++|++++.+ ++++|+|+|+|+ .++.+++++.+++..+.++.++....
T Consensus 219 ~~~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp--~~~~L~~~a~~l~l~~~vf~G~~~~~ 295 (462)
T PLN02846 219 QQKN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE--DSDEVKAAAEKLELDVRVYPGRDHAD 295 (462)
T ss_pred hhcC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc--cHHHHHHHHHhcCCcEEEECCCCCHH
Confidence 2222 222113479999999999999999999999865 689999999998 66778888777664344455554332
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHH
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~l 550 (612)
.+++.+|+||+||..|++|++++||||||+|||+++.++ .+++.++.+|+.+ .|.++++++|.++
T Consensus 296 --~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~------------~~~~~~a~ai~~~ 360 (462)
T PLN02846 296 --PLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY------------DDGKGFVRATLKA 360 (462)
T ss_pred --HHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec------------CCHHHHHHHHHHH
Confidence 589999999999999999999999999999999999997 5999999999964 6899999999999
Q ss_pred HHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 551 LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
+++. +..+ ..+ ..+.|||+..+++++++|+--
T Consensus 361 l~~~-~~~~---~~~-a~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 361 LAEE-PAPL---TDA-QRHELSWEAATERFLRVADLD 392 (462)
T ss_pred HccC-chhH---HHH-HHHhCCHHHHHHHHHHHhccC
Confidence 9863 2222 222 236899999999999999843
No 28
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=3.5e-34 Score=307.45 Aligned_cols=229 Identities=16% Similarity=0.179 Sum_probs=183.2
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+.+..++.+|.++++|+..++.+.+. ++.. ....+.+|+||+|.+.|.|.... .
T Consensus 147 ~e~~~~~~ad~ii~~s~~~~~~~~~~--~~~~-----~~~~~~vi~n~vd~~~~~~~~~~-------------------~ 200 (392)
T cd03805 147 LEEFTTGMADKIVVNSNFTASVFKKT--FPSL-----AKNPREVVYPCVDTDSFESTSED-------------------P 200 (392)
T ss_pred HHHHHhhCceEEEEcChhHHHHHHHH--hccc-----ccCCcceeCCCcCHHHcCccccc-------------------c
Confidence 34567889999999999999988752 2211 11145699999999888664321 0
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc-----CCeEEEEEecCCh------hHHHHHHHHHHH-C-
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-----ENVQIIVLGTGKK------PMEKQLEQLEIL-Y- 456 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~-----~~~~lvivG~g~~------~~~~~l~~l~~~-~- 456 (612)
..+....+ .+.++|+++||+.+.||++.+++|++++.+ ++++|+++|+|+. .+.+.++++..+ .
T Consensus 201 -~~~~~~~~--~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~ 277 (392)
T cd03805 201 -DPGLLIPK--SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLL 277 (392)
T ss_pred -cccccccC--CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcC
Confidence 11122222 245899999999999999999999999864 4899999998763 345677777666 3
Q ss_pred -CCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccC
Q 007212 457 -PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 457 -~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v 535 (612)
.+++.+.+..+.+++..+++.||++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~---------- 347 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLC---------- 347 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEe----------
Confidence 357899998888888899999999999999999999999999999999999999999999999999975
Q ss_pred CCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHH
Q 007212 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKW 580 (612)
Q Consensus 536 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~ 580 (612)
++ |+++++++|.+++++ ++.+.++++++ +.++|||+.+++++
T Consensus 348 ~~-~~~~~a~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 348 EP-TPEEFAEAMLKLAND--PDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred CC-CHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 55 999999999999998 55667777766 46899999998764
No 29
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=9.8e-34 Score=302.61 Aligned_cols=275 Identities=18% Similarity=0.172 Sum_probs=203.3
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+ +|+|++....++...+ . .++|++++.|+..... ....
T Consensus 85 ~~Dv-v~~h~~~~~~~~~~~~-~-------~~~~~i~~~H~~~~~~------------------------------~~~~ 125 (372)
T cd03792 85 DADV-VVIHDPQPLALPLFKK-K-------RGRPWIWRCHIDLSSP------------------------------NRRV 125 (372)
T ss_pred CCCE-EEECCCCchhHHHhhh-c-------CCCeEEEEeeeecCCC------------------------------cHHH
Confidence 5895 8999887433322221 1 3789999999532100 0012
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCC-cCCCcccccccccCcchhhhccHH
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQE-WNPLTDKYIGVKYDASTVMDAKPL 386 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~-~~p~~~~~~~~~~~~~~~~~~~~~ 386 (612)
+.+++..++.+|.+++.|..+.. .++.. .++ +||||+|... +... ++ +.
T Consensus 126 ~~~~~~~~~~~d~~i~~~~~~~~-------~~~~~------~~~-vipngvd~~~~~~~~--------~~--------~~ 175 (372)
T cd03792 126 WDFLQPYIEDYDAAVFHLPEYVP-------PQVPP------RKV-IIPPSIDPLSGKNRE--------LS--------PA 175 (372)
T ss_pred HHHHHHHHHhCCEEeecHHHhcC-------CCCCC------ceE-EeCCCCCCCccccCC--------CC--------HH
Confidence 34566778899999998843322 22221 144 9999999653 1111 11 11
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCCh---hHHHHHHHHHHH--CCCc
Q 007212 387 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEIL--YPEK 459 (612)
Q Consensus 387 ~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~--~~~~ 459 (612)
....+++++|++. +.++|+++||+.++||++.+++|++.+.+ ++++|+|+|+|+. +..+.++++... ..++
T Consensus 176 ~~~~~~~~~~~~~--~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~ 253 (372)
T cd03792 176 DIEYILEKYGIDP--ERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPD 253 (372)
T ss_pred HHHHHHHHhCCCC--CCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCC
Confidence 2445677888865 44899999999999999999999998865 6899999999852 233334444422 3345
Q ss_pred eEEEecc--ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCC
Q 007212 460 ARGVAKF--NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 460 v~~~~~~--~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~ 537 (612)
+.+.+.. +.+++..+++.||++++||.+|+||++++|||+||+|||+|+.+|..+++.++.+|+++ +
T Consensus 254 v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~----------~- 322 (372)
T cd03792 254 IHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV----------D- 322 (372)
T ss_pred eEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe----------C-
Confidence 7777665 67888899999999999999999999999999999999999999999999999999975 3
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 538 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 538 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
+.++++++|.+++++ ++.+++|++++ +.++|||+.++++|+++|+++
T Consensus 323 -~~~~~a~~i~~ll~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 323 -TVEEAAVRILYLLRD--PELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred -CcHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 567889999999987 66777777776 457999999999999999863
No 30
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=6.9e-34 Score=306.16 Aligned_cols=382 Identities=14% Similarity=0.127 Sum_probs=233.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
||||+|... ...||.|..+.+|++.|.++||+|.++..+......... .+++..
T Consensus 1 mkil~i~~~----l~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~----------------------~~~~~~ 54 (405)
T PRK10125 1 MNILQFNVR----LAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVS----------------------HQNYPQ 54 (405)
T ss_pred CeEEEEEee----ecCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccc----------------------cCCcce
Confidence 899999975 347999999999999999999999999987332111000 001111
Q ss_pred EEEeCc-------cccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCC
Q 007212 165 VFVDHP-------WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAND 237 (612)
Q Consensus 165 ~~v~~~-------~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~ 237 (612)
.....+ ..+.|+.++.+ ++ -..+..+.+.. .+ +||| ||+|.
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~---~~----------------~~~~~~~~i~~-~~-----------~pDv-iHlH~ 102 (405)
T PRK10125 55 VIKHTPRMTAMANIALFRLFNRDL---FG----------------NFNELYRTITR-TP-----------GPVV-LHFHV 102 (405)
T ss_pred EEEecccHHHHHHHHHHHhcchhh---cc----------------hHHHHHHHHhh-cc-----------CCCE-EEEec
Confidence 100000 01111111000 00 01112222211 22 4895 99998
Q ss_pred CcccchHHH--HHh--hhcCCCCcCCceEEEEEecCCc-ccccCccc-ccccCCCcccccccccccCCCC-C------cC
Q 007212 238 WHTSLIPCY--LKT--MYKPKGMYKSAKVVFCIHNIAY-QGRFAFED-FGLLNLPAQFKSSFDFIDGYNK-P------VR 304 (612)
Q Consensus 238 ~~~~~~~~~--l~~--~~~~~~~~~~~pvv~~iH~~~~-~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~-~------~~ 304 (612)
.+.+++... ++. ..+.. ..++|+|+|+|+... .|.+.... .. ++....... ....+|.. . .+
T Consensus 103 ~~~~~~~~~~l~~~~~~~~~~--~~~~piV~TlHd~~~~tg~c~~~~~C~--~~~~~c~~C-p~l~~~~~~~~d~~~~~~ 177 (405)
T PRK10125 103 LHSYWLNLKSVVRFCEKVKNH--KPDVTLVWTLHDHWSVTGRCAFTDGCE--GWKTGCQKC-PTLNNYPPVKVDRAHQLV 177 (405)
T ss_pred ccCceecHHHHHHHHhhhhcc--cCCCCEEEecccccccCCCcCCCcccc--cccccCCCC-CCccCCCCCccchHHHHH
Confidence 887644332 111 00001 147899999998753 33333210 00 000000000 00000100 0 01
Q ss_pred CchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhcc
Q 007212 305 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 305 ~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
.++..+.+...+.++.++++|+..++.+.+. ++. .++.+||||+|+..+.+...
T Consensus 178 ~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~--~~~--------~~i~vI~NGid~~~~~~~~~---------------- 231 (405)
T PRK10125 178 AGKRQLFREMLALGCQFISPSQHVADAFNSL--YGP--------GRCRIINNGIDMATEAILAE---------------- 231 (405)
T ss_pred HHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH--cCC--------CCEEEeCCCcCccccccccc----------------
Confidence 1122223334455789999999999988752 332 28999999999754322211
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEccC--ccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 385 PLLKEALQAEVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 385 ~~~~~~l~~~~gl~~~~~~~~i~~iGrl--~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
.... ..+ ++.++|+++|+. .+.||++.+++|++.+. ++++|+|+|.|++.. ..++.+
T Consensus 232 ---~~~~----~~~--~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~~v~~ 290 (405)
T PRK10125 232 ---LPPV----RET--QGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AGNVVN 290 (405)
T ss_pred ---cccc----ccC--CCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------ccceEE
Confidence 0000 011 245789999994 47899999999999874 589999999876321 123555
Q ss_pred Eecc-ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHH
Q 007212 463 VAKF-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 463 ~~~~-~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~ 541 (612)
.+.. +...+..+|+.||++|+||.+|+||++++||||||+|||+|+.||++|++.++ +|+++ +++|++
T Consensus 291 ~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv----------~~~d~~ 359 (405)
T PRK10125 291 HGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTV----------SEEEVL 359 (405)
T ss_pred ecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEE----------CCCCHH
Confidence 4433 45667789999999999999999999999999999999999999999999875 89976 999999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 542 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 542 ~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
+|++.+...+.+.........+++...+.|||+.++++|+++|+++
T Consensus 360 ~La~~~~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 360 QLAQLSKPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred HHHhccCHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 9998654322220000011223344578899999999999999864
No 31
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=6.6e-33 Score=293.28 Aligned_cols=356 Identities=18% Similarity=0.194 Sum_probs=243.1
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+.++.| ...||.+.++.+|+++|+++||+|+|+++....... .....|++++
T Consensus 1 ~i~~i~~~~~~-~~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~----------------------~~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIP-AKYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK----------------------ETEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCC-cccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc----------------------ccccCCceEE
Confidence 79999876555 358999999999999999999999999976321110 1123466666
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+..+.... ...+.......+.... . ++|. +|+|.+.....+.
T Consensus 58 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~~-~-------------~~~~-~~i~~~~~~~~~~ 100 (363)
T cd04955 58 HIPAPEIGG----------------------LGTIIYDILAILHALF-V-------------KRDI-DHVHALGPAIAPF 100 (363)
T ss_pred EcCCCCccc----------------------hhhhHHHHHHHHHHHh-c-------------cCCe-EEEEecCccHHHH
Confidence 653221000 0001011111111111 1 1342 4444333322222
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh-HHHHHHHhhCCEEEec
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLTV 324 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~l~~ad~vi~v 324 (612)
...... .+.|+++++|+..+... ..+. + ..... ...+..++.+|.++++
T Consensus 101 ~~~~~~------~~~~~v~~~h~~~~~~~---------~~~~--------------~-~~~~~~~~~~~~~~~ad~ii~~ 150 (363)
T cd04955 101 LPLLRL------KGKKVVVNMDGLEWKRA---------KWGR--------------P-AKRYLKFGEKLAVKFADRLIAD 150 (363)
T ss_pred HHHHHh------cCCCEEEEccCcceeec---------cccc--------------c-hhHHHHHHHHHHHhhccEEEeC
Confidence 211111 37899999997543210 0000 0 00111 2235567899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+... +|.. . .+||||+|...+.+. ....++.+++. ..
T Consensus 151 s~~~~~~~~~~--~~~~--------~-~~i~ngv~~~~~~~~----------------------~~~~~~~~~~~---~~ 194 (363)
T cd04955 151 SPGIKEYLKEK--YGRD--------S-TYIPYGADHVVSSEE----------------------DEILKKYGLEP---GR 194 (363)
T ss_pred CHHHHHHHHHh--cCCC--------C-eeeCCCcChhhcchh----------------------hhhHHhcCCCC---Cc
Confidence 99999998642 4432 3 899999998765431 12344455542 24
Q ss_pred EEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC--hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
.++|+||+.+.||++.+++|++++.+ +++|+++|+|+ ..+.+.+++. ....+++.+.+..+.++...++..||+++
T Consensus 195 ~i~~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~~~~~~~~~~~-~~~~~~V~~~g~~~~~~~~~~~~~ad~~v 272 (363)
T cd04955 195 YYLLVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHNTPYGKLLKEK-AAADPRIIFVGPIYDQELLELLRYAALFY 272 (363)
T ss_pred EEEEEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCcchHHHHHHHH-hCCCCcEEEccccChHHHHHHHHhCCEEE
Confidence 68899999999999999999999854 89999999974 2344444432 22345788888888888888999999999
Q ss_pred EcCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 483 IPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 483 ~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
+||.. |+||++++|||+||+|||+|+.|+..|++.+ +|+++ ++.|. ++++|.+++++ ++.+.+
T Consensus 273 ~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~----------~~~~~--l~~~i~~l~~~--~~~~~~ 336 (363)
T cd04955 273 LHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYF----------KVGDD--LASLLEELEAD--PEEVSA 336 (363)
T ss_pred eCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEe----------cCchH--HHHHHHHHHhC--HHHHHH
Confidence 99999 9999999999999999999999999999976 67765 66665 99999999998 566666
Q ss_pred HHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 562 MMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
+++++ ..++|||+.++++|+++|+
T Consensus 337 ~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 337 MAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 76665 4577999999999999984
No 32
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=7.6e-33 Score=291.25 Aligned_cols=360 Identities=23% Similarity=0.266 Sum_probs=252.7
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..|+|. .||.+.++..|+++|+++||+|+++++.......... ..+.+.
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----------------------~~~~~~ 55 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-----------------------RVVPVP 55 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-----------------------Cceeec
Confidence 799999999886 6999999999999999999999999987432111100 000010
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc-chH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS-LIP 244 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~-~~~ 244 (612)
....+.+.. .... +. ........++.. +||+ +|+|..... ...
T Consensus 56 ~~~~~~~~~-------~~~~-------~~--------~~~~~~~~~~~~-------------~pdi-i~~~~~~~~~~~~ 99 (364)
T cd03814 56 SVPLPGYPE-------IRLA-------LP--------PRRRVRRLLDAF-------------APDV-VHIATPGPLGLAA 99 (364)
T ss_pred ccccCcccc-------eEec-------cc--------chhhHHHHHHhc-------------CCCE-EEEeccchhhHHH
Confidence 000000000 0000 00 001111222222 4896 777743322 222
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
..+... .++|+++++|+...+- . ... ... +.........+..++.+|.++++
T Consensus 100 ~~~~~~-------~~~~~i~~~~~~~~~~--~----~~~-~~~--------------~~~~~~~~~~~~~~~~~d~i~~~ 151 (364)
T cd03814 100 LRAARR-------LGIPVVTSYHTDFPEY--L----RYY-GLG--------------PLSWLAWAYLRWFHNRADRVLVP 151 (364)
T ss_pred HHHHHH-------cCCCEEEEEecChHHH--h----hhc-ccc--------------hHhHhhHHHHHHHHHhCCEEEeC
Confidence 222222 4889999999643210 0 000 000 00001123456678899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+...+.+.. .+.. ++.+++||+|...+.|... +...+.+++ + .+.+
T Consensus 152 s~~~~~~~~~---~~~~--------~~~~~~~g~~~~~~~~~~~-------------------~~~~~~~~~-~--~~~~ 198 (364)
T cd03814 152 SPSLADELRA---RGFR--------RVRLWPRGVDTELFHPRRR-------------------DEALRARLG-P--PDRP 198 (364)
T ss_pred CHHHHHHHhc---cCCC--------ceeecCCCccccccCcccc-------------------cHHHHHHhC-C--CCCe
Confidence 9999996664 3322 7899999999988876532 222334444 2 2457
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
+|+|+|++.+.||++.++++++++.+ ++++|+|+|.++ ....++ ....++.+.+..+.+++..+++.||++++
T Consensus 199 ~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~--~~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ 272 (364)
T cd03814 199 VLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGP--ARARLE----ARYPNVHFLGFLDGEELAAAYASADVFVF 272 (364)
T ss_pred EEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCc--hHHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEE
Confidence 99999999999999999999999976 589999999987 333333 33456888888788888899999999999
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHH
Q 007212 484 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 563 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~ 563 (612)
||..|++|++++|||+||+|||+++.++..|++.++.+|+++ ++.|.++++++|.+++++ ++.+.+++
T Consensus 273 ~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~ 340 (364)
T cd03814 273 PSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLV----------EPGDAEAFAAALAALLAD--PELRRRMA 340 (364)
T ss_pred CcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEc----------CCCCHHHHHHHHHHHHcC--HHHHHHHH
Confidence 999999999999999999999999999999999998999976 999999999999999998 67777777
Q ss_pred HHHH--HhhcCcHHHHHHHHHHHH
Q 007212 564 KNGM--AQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 564 ~~~~--~~~fsw~~~a~~~~~~y~ 585 (612)
+++. .++|+|+.++++++++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 341 ARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhhC
Confidence 7773 368999999999999873
No 33
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=1.4e-32 Score=290.75 Aligned_cols=352 Identities=18% Similarity=0.218 Sum_probs=248.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++.. +. .||.+.++..++++|.++||+|++++....
T Consensus 1 MkIl~~~~~--~~--~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--DI--SGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--CC--CCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999864 32 699999999999999999999999997611
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
.+.. .++. .+||+ ||+|.+....+.
T Consensus 42 ------~~~~-----------------------------------~~~~-------------~~~di-ih~~~~~~~~~~ 66 (365)
T cd03825 42 ------ALIS-----------------------------------KIEI-------------INADI-VHLHWIHGGFLS 66 (365)
T ss_pred ------hhhh-----------------------------------Chhc-------------ccCCE-EEEEccccCccC
Confidence 0000 0111 14795 899987766655
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccc--cCcccccccCCCcccccccccccCCCC-CcCCchhHHHHHHH-hhCCE
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGR--FAFEDFGLLNLPAQFKSSFDFIDGYNK-PVRGRKINWMKAGI-LESDM 320 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~k~~l-~~ad~ 320 (612)
......+. .++|+|+++|+..+... ......... ..... ...+...+.. ......+.+.+..+ ..++.
T Consensus 67 ~~~~~~~~-----~~~~~v~~~hd~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (365)
T cd03825 67 IEDLSKLL-----DRKPVVWTLHDMWPFTGGCHYPGGCDRY--KTECG-NCPQLGSYPEKDLSRWIWRRKRKAWADLNLT 138 (365)
T ss_pred HHHHHHHH-----cCCCEEEEcccCcccccccCCccccccc--cccCC-CCCCCCCCCcccHHHHHHHHHHHHhccCCcE
Confidence 44433321 38899999997643210 000000000 00000 0000000000 00001112222222 45788
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 400 (612)
++++|+...+.+.+. +.++ ..++.+||||+|.+.|.|.. +...++.++++.+
T Consensus 139 ~v~~s~~~~~~~~~~--~~~~------~~~~~vi~ngi~~~~~~~~~--------------------~~~~~~~~~~~~~ 190 (365)
T cd03825 139 IVAPSRWLADCARSS--SLFK------GIPIEVIPNGIDTTIFRPRD--------------------KREARKRLGLPAD 190 (365)
T ss_pred EEehhHHHHHHHHhc--cccC------CCceEEeCCCCcccccCCCc--------------------HHHHHHHhCCCCC
Confidence 999999999888752 1122 23899999999998886643 4456777787754
Q ss_pred CCCcEEEEEccCcc--ccCHHHHHHHHHhccc---CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccC-hHHHHHH
Q 007212 401 RNIPVIGFIGRLEE--QKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-IPLAHMI 474 (612)
Q Consensus 401 ~~~~~i~~iGrl~~--~Kg~d~li~A~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~-~~~~~~i 474 (612)
.+++++.|+... .||++.+++|++.+.+ ++++++++|.++..... ....++.+.+..+ .+.+..+
T Consensus 191 --~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 261 (365)
T cd03825 191 --KKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLALI 261 (365)
T ss_pred --CeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHHH
Confidence 367777777655 8999999999999875 68999999998743221 2344577888877 7778889
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007212 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 475 ~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
++.||++++||..|++|++++|||++|+|||+++.||+.|++.++.+|+++ ++.|++++++++.+++++
T Consensus 262 ~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~l~~l~~~- 330 (365)
T cd03825 262 YSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLA----------KPGDPEDLAEGIEWLLAD- 330 (365)
T ss_pred HHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEe----------CCCCHHHHHHHHHHHHhC-
Confidence 999999999999999999999999999999999999999999998899976 889999999999999987
Q ss_pred CHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 555 GTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 555 ~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
++.+.++++++ ..++|||+.++++|+++|+++
T Consensus 331 -~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 331 -PDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred -HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 55566666655 568899999999999999864
No 34
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=1.1e-32 Score=290.81 Aligned_cols=338 Identities=22% Similarity=0.254 Sum_probs=240.6
Q ss_pred ccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeCccccccccC
Q 007212 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWG 178 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~g 178 (612)
..||.+.++.+|+++|+++||+|.++++.... .+. ....|++++.+.... .
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~----------------------~~~~~~~~~~~~~~~--~---- 58 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRL-VAE----------------------LEAEGSRHIKLPFIS--K---- 58 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCch-HHH----------------------HHhcCCeEEEccccc--c----
Confidence 35999999999999999999999999875211 110 011233333321100 0
Q ss_pred CCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHHHHHhhhcCCCCcC
Q 007212 179 KTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYK 258 (612)
Q Consensus 179 ~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~ 258 (612)
. ..............++.. +||+ ||+|.+.......+.... .
T Consensus 59 ----~-------------~~~~~~~~~~l~~~~~~~-------------~~di-i~~~~~~~~~~~~~~~~~-------~ 100 (355)
T cd03819 59 ----N-------------PLRILLNVARLRRLIREE-------------KVDI-VHARSRAPAWSAYLAARR-------T 100 (355)
T ss_pred ----c-------------hhhhHHHHHHHHHHHHHc-------------CCCE-EEECCCchhHHHHHHHHh-------c
Confidence 0 001111112233333332 5895 899876665555444433 4
Q ss_pred CceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCC
Q 007212 259 SAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK 338 (612)
Q Consensus 259 ~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~ 338 (612)
++|+++++|+..... .+.+..+..+|.++++|+...+.+.+ .+
T Consensus 101 ~~~~i~~~h~~~~~~-----------------------------------~~~~~~~~~~~~vi~~s~~~~~~~~~--~~ 143 (355)
T cd03819 101 RPPFVTTVHGFYSVN-----------------------------------FRYNAIMARGDRVIAVSNFIADHIRE--NY 143 (355)
T ss_pred CCCEEEEeCCchhhH-----------------------------------HHHHHHHHhcCEEEEeCHHHHHHHHH--hc
Confidence 899999999643210 03445677899999999999999884 25
Q ss_pred CccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCH
Q 007212 339 GVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 418 (612)
Q Consensus 339 G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~ 418 (612)
|++.+ ++.+||||+|...|.+.... ......++++++++. +.++|+|+||+.+.||+
T Consensus 144 ~~~~~------k~~~i~ngi~~~~~~~~~~~---------------~~~~~~~~~~~~~~~--~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 144 GVDPD------RIRVIPRGVDLDRFDPGAVP---------------PERILALAREWPLPK--GKPVILLPGRLTRWKGQ 200 (355)
T ss_pred CCChh------hEEEecCCccccccCccccc---------------hHHHHHHHHHcCCCC--CceEEEEeeccccccCH
Confidence 65544 89999999999888654321 111223667777654 44899999999999999
Q ss_pred HHHHHHHHhccc--CCeEEEEEecCCh--hHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEEEEcC-CCCCCc
Q 007212 419 DILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPS-RFEPCG 491 (612)
Q Consensus 419 d~li~A~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~v~pS-~~E~~g 491 (612)
+.+++++..+.+ ++++|+|+|.++. .+.+.+.+...+++ +++.+.+. .+++..+++.||++++|| ..|++|
T Consensus 201 ~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~ 278 (355)
T cd03819 201 EVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFG 278 (355)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCc
Confidence 999999999977 6899999999863 34455555555443 45776666 445668999999999999 789999
Q ss_pred HHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HH
Q 007212 492 LIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MA 568 (612)
Q Consensus 492 l~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~ 568 (612)
++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|..++... ++.+.++++++ +.
T Consensus 279 ~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 279 RTAVEAQAMGRPVIASDHGGARETVRPGETGLLV----------PPGDAEALAQALDQILSLL-PEGRAKMFAKARMCVE 347 (355)
T ss_pred hHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEe----------CCCCHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999986 9999999999997666531 45556666655 67
Q ss_pred hhcCcHHH
Q 007212 569 QDLSWKGP 576 (612)
Q Consensus 569 ~~fsw~~~ 576 (612)
++|||+.+
T Consensus 348 ~~f~~~~~ 355 (355)
T cd03819 348 TLFSYDRM 355 (355)
T ss_pred HhhhhccC
Confidence 99999853
No 35
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=3.5e-33 Score=297.05 Aligned_cols=220 Identities=17% Similarity=0.207 Sum_probs=177.2
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcC-CCcccccccccCcchhhhccHHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWN-PLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
+..+|.++++|+..++.+.. +|++.+ ++.+||||+|.+.+. |..
T Consensus 131 ~~~~d~~i~~S~~~~~~~~~---~~~~~~------ki~vi~N~id~~~~~~~~~-------------------------- 175 (359)
T PRK09922 131 ITCADYHLAISSGIKEQMMA---RGISAQ------RISVIYNPVEIKTIIIPPP-------------------------- 175 (359)
T ss_pred hhcCCEEEEcCHHHHHHHHH---cCCCHH------HEEEEcCCCCHHHccCCCc--------------------------
Confidence 46899999999999999986 566544 899999999965442 211
Q ss_pred HhCCCCCCCCcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccCh-
Q 007212 394 EVGLPVDRNIPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNI- 468 (612)
Q Consensus 394 ~~gl~~~~~~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~- 468 (612)
...+.++|+|+||+. ++||++.+++|+.++. ++++|+|+|+|+ ..+.++++..++ ++++.+.+..+.
T Consensus 176 -----~~~~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~-~~~~l~ivG~g~--~~~~l~~~~~~~~l~~~v~f~G~~~~~ 247 (359)
T PRK09922 176 -----ERDKPAVFLYVGRLKFEGQKNVKELFDGLSQTT-GEWQLHIIGDGS--DFEKCKAYSRELGIEQRIIWHGWQSQP 247 (359)
T ss_pred -----ccCCCcEEEEEEEEecccCcCHHHHHHHHHhhC-CCeEEEEEeCCc--cHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 112357899999996 5699999999999884 489999999997 455667776654 356877776533
Q ss_pred -HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC-CCCcccceecCcceEEecccccccccCCCCCHHHHHHH
Q 007212 469 -PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 469 -~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~ 546 (612)
+.+..+|+.||++++||.+|+||++++|||+||+|||+++ .||..|+|.++.+|+++ +++|+++++++
T Consensus 248 ~~~~~~~~~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv----------~~~d~~~la~~ 317 (359)
T PRK09922 248 WEVVQQKIKNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELY----------TPGNIDEFVGK 317 (359)
T ss_pred HHHHHHHHhcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEE----------CCCCHHHHHHH
Confidence 6677889999999999999999999999999999999999 89999999999999976 99999999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 547 VRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 547 i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
|.++++++.......+.+ ...+|+-+...+++.++|..++.
T Consensus 318 i~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 358 (359)
T PRK09922 318 LNKVISGEVKYQHDAIPN--SIERFYEVLYFKNLNNALFSKLQ 358 (359)
T ss_pred HHHHHhCcccCCHHHHHH--HHHHhhHHHHHHHHHHHHHHHhc
Confidence 999999843111222222 35678889999999999988763
No 36
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=1e-32 Score=292.85 Aligned_cols=272 Identities=21% Similarity=0.286 Sum_probs=213.5
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+ ||+|....+.....+.+. .++|++++.|+.......... .... +...
T Consensus 82 ~~dv-vh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~~~------~~~~---------------~~~~ 132 (367)
T cd05844 82 RPDL-VHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLALL------LRSR---------------WALY 132 (367)
T ss_pred CCCE-EEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccchhh------cccc---------------hhHH
Confidence 4895 899966555555544443 489999999964321100000 0000 0012
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHH
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
....+..++.+|.++++|+..++.+.+ .|.+.+ ++.+++||+|.+.+.|...
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~~~------~i~vi~~g~d~~~~~~~~~------------------- 184 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLA---LGFPPE------KVHVHPIGVDTAKFTPATP------------------- 184 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHH---cCCCHH------HeEEecCCCCHHhcCCCCC-------------------
Confidence 234466778999999999999999986 465544 8999999999887765421
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHH--CCCceEEE
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGV 463 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~ 463 (612)
..+.++++|+|++.+.||++.+++|++.+.+ ++++|+|+|.|+ ..+.++++..+ ..+++.+.
T Consensus 185 ------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFL 250 (367)
T ss_pred ------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEEC
Confidence 1244789999999999999999999999865 689999999987 55667777766 34678888
Q ss_pred eccChHHHHHHHHhccEEEEcCC------CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCC
Q 007212 464 AKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~ 537 (612)
+..+.+++..+++.||++++||. .|+||++++|||+||+|||+++.++..|++.++.+|+++ ++
T Consensus 251 g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~----------~~ 320 (367)
T cd05844 251 GAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLV----------PE 320 (367)
T ss_pred CCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEE----------CC
Confidence 88888888899999999999997 499999999999999999999999999999999999986 89
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHH
Q 007212 538 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 538 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~ 582 (612)
.|+++++++|.+++++ ++.+.+++.++ +.++|||+..++++++
T Consensus 321 ~d~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLAD--PDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999998 66666666665 4689999999999876
No 37
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=2.4e-32 Score=288.39 Aligned_cols=353 Identities=19% Similarity=0.242 Sum_probs=249.7
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+++++.+ ..||.+.++.+|+++|.++||+|++++...+....... .+....
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-----------------------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-----------------------hccceE
Confidence 588888663 36999999999999999999999999865221111000 000000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+... . ....+........++++.. +||+ +|+|.+++.++..
T Consensus 54 ~~~~~---~---------------------~~~~~~~~~~~~~~~~~~~-------------~pdi-v~~~~~~~~~~~~ 95 (360)
T cd04951 54 NLNMS---K---------------------NPLSFLLALWKLRKILRQF-------------KPDV-VHAHMFHANIFAR 95 (360)
T ss_pred Eeccc---c---------------------cchhhHHHHHHHHHHHHhc-------------CCCE-EEEcccchHHHHH
Confidence 11000 0 0001111112233344433 4895 8999887766666
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
+++... .+.|++++.|+....+. ......+.....++.++++|
T Consensus 96 l~~~~~------~~~~~v~~~h~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~s 138 (360)
T cd04951 96 LLRLFL------PSPPLICTAHSKNEGGR-------------------------------LRMLAYRLTDFLSDLTTNVS 138 (360)
T ss_pred HHHhhC------CCCcEEEEeeccCchhH-------------------------------HHHHHHHHHhhccCceEEEc
Confidence 655542 57899999996543110 01112233445688899999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+. .+.+. .++.+||||+|...|.+... .+..++++++++. +.++
T Consensus 139 ~~~~~~~~~~--~~~~~------~~~~~i~ng~~~~~~~~~~~------------------~~~~~~~~~~~~~--~~~~ 190 (360)
T cd04951 139 KEALDYFIAS--KAFNA------NKSFVVYNGIDTDRFRKDPA------------------RRLKIRNALGVKN--DTFV 190 (360)
T ss_pred HHHHHHHHhc--cCCCc------ccEEEEccccchhhcCcchH------------------HHHHHHHHcCcCC--CCEE
Confidence 9999988752 22232 38999999999887765421 2455778888864 4489
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
++|+||+.+.||++.+++|+.++.+ ++++|+|+|+|+ ..+.+++...+++ +++.+.+.. +++..+++.||++
T Consensus 191 ~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~ 266 (360)
T cd04951 191 ILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--LRATLERLIKALGLSNRVKLLGLR--DDIAAYYNAADLF 266 (360)
T ss_pred EEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--cHHHHHHHHHhcCCCCcEEEeccc--ccHHHHHHhhceE
Confidence 9999999999999999999999865 589999999988 4455555555443 457776643 3456799999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
++||..|++|++++|||++|+|||+++.|+..|++.+ +|+.+ +++|+++++++|.+++++. +.....
T Consensus 267 v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~----------~~~~~~~~~~~i~~ll~~~-~~~~~~ 333 (360)
T cd04951 267 VLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIV----------PISDPEALANKIDEILKMS-GEERDI 333 (360)
T ss_pred EecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEe----------CCCCHHHHHHHHHHHHhCC-HHHHHH
Confidence 9999999999999999999999999999999999987 67765 8899999999999999652 333333
Q ss_pred HHH--HHHHhhcCcHHHHHHHHHHHH
Q 007212 562 MMK--NGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~~--~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+.. +.+.+.|||+.++++|+++|.
T Consensus 334 ~~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 334 IGARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 333 346799999999999999996
No 38
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=1.6e-32 Score=287.58 Aligned_cols=357 Identities=19% Similarity=0.207 Sum_probs=256.0
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|...+.+ ||.+.++..|+++|.+.||+|.+++......... .....|++++
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~---------------------~~~~~~i~v~ 55 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGELGE---------------------ELEEAGVPVY 55 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchhhhH---------------------HHHhcCCeEE
Confidence 79999988644 9999999999999999999999998652211000 0001255555
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+..+.... .........+.++.. +||+ +|+|.++......
T Consensus 56 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~~-------------~~di-v~~~~~~~~~~~~ 96 (365)
T cd03807 56 CLGKRPGRP-------------------------DPGALLRLYKLIRRL-------------RPDV-VHTWMYHADLYGG 96 (365)
T ss_pred EEecccccc-------------------------cHHHHHHHHHHHHhh-------------CCCE-EEeccccccHHHH
Confidence 543221100 001112233334332 4895 8888777666555
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
...... .+.|++++.|+...... + .. ........+.....+|.++++|
T Consensus 97 ~~~~~~------~~~~~i~~~~~~~~~~~---------~---~~--------------~~~~~~~~~~~~~~~~~~i~~s 144 (365)
T cd03807 97 LAARLA------GVPPVIWGIRHSDLDLG---------K---KS--------------TRLVARLRRLLSSFIPLIVANS 144 (365)
T ss_pred HHHHhc------CCCcEEEEecCCccccc---------c---hh--------------HhHHHHHHHHhccccCeEEecc
Confidence 554432 37899999997554210 0 00 0011223344566789999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+ +|.+.+ ++.+++||+|...+.+.... +..++++++++. +.++
T Consensus 145 ~~~~~~~~~---~~~~~~------~~~vi~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~--~~~~ 195 (365)
T cd03807 145 AAAAEYHQA---IGYPPK------KIVVIPNGVDTERFSPDLDA------------------RARLREELGLPE--DTFL 195 (365)
T ss_pred HHHHHHHHH---cCCChh------heeEeCCCcCHHhcCCcccc------------------hHHHHHhcCCCC--CCeE
Confidence 999999886 455444 89999999998877665321 445567788864 4489
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHH-H--CCCceEEEeccChHHHHHHHHhccE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-L--YPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~--~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
|+|+||+.+.||++.+++|+..+.+ ++++|+++|.+.. ...++.... . ..+++.+.+. .+++..+++.||+
T Consensus 196 i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi 271 (365)
T cd03807 196 IGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPD--RANLELLALKELGLEDKVILLGE--RSDVPALLNALDV 271 (365)
T ss_pred EEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcc--hhHHHHHHHHhcCCCceEEEccc--cccHHHHHHhCCE
Confidence 9999999999999999999999865 6899999999873 222333322 2 3345655553 3446689999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
+++||..|++|++++|||+||+|||+++.|+..|++.+ +|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 272 ~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~ 337 (365)
T cd03807 272 FVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLV----------PPGDPEALAEAIEALLAD--PALRQ 337 (365)
T ss_pred EEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEe----------CCCCHHHHHHHHHHHHhC--hHHHH
Confidence 99999999999999999999999999999999999988 78876 889999999999999998 56666
Q ss_pred HHHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 561 EMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 561 ~~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
++++++ +.++|||+..+++|+++|+
T Consensus 338 ~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 338 ALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 666665 5688999999999999884
No 39
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=2.8e-32 Score=287.59 Aligned_cols=349 Identities=20% Similarity=0.253 Sum_probs=244.3
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
|||+|+.+|+|. .||.+.++.+|+++|.++||+|++++......... ....+++++
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~----------------------~~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRD----------------------EERNGHRVI 56 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchh----------------------hhccCceEE
Confidence 799999999996 89999999999999999999999999763321110 011122222
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+.... . .+. ...... + ...++... .+||+ +|+|.........
T Consensus 57 ~~~~~~--~---------~~~-------~~~~~~--~-----~~~~~~~~-----------~~~Di-i~~~~~~~~~~~~ 99 (357)
T cd03795 57 RAPSLL--N---------VAS-------TPFSPS--F-----FKQLKKLA-----------KKADV-IHLHFPNPLADLA 99 (357)
T ss_pred Eeeccc--c---------ccc-------ccccHH--H-----HHHHHhcC-----------CCCCE-EEEecCcchHHHH
Confidence 221110 0 000 000000 0 01111111 25895 8887533222211
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
..... .+.|++++.|+....... . ......+++..++.+|.++++|
T Consensus 100 ~~~~~-------~~~~~i~~~h~~~~~~~~-------------~--------------~~~~~~~~~~~~~~~d~vi~~s 145 (357)
T cd03795 100 LLLLP-------RKKPVVVHWHSDIVKQKL-------------L--------------LKLYRPLQRRFLRRADAIVATS 145 (357)
T ss_pred HHHhc-------cCceEEEEEcChhhccch-------------h--------------hhhhhHHHHHHHHhcCEEEeCc
Confidence 11111 378999999953221100 0 0011234566789999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+.+.+.+.....+. .++.+||||+|...+.+.... .. .....+ .+.++
T Consensus 146 ~~~~~~~~~~~~~~---------~~~~~i~~gi~~~~~~~~~~~------------------~~---~~~~~~--~~~~~ 193 (357)
T cd03795 146 PNYAETSPVLRRFR---------DKVRVIPLGLDPARYPRPDAL------------------EE---AIWRRA--AGRPF 193 (357)
T ss_pred HHHHHHHHHhcCCc---------cceEEecCCCChhhcCCcchh------------------hh---HhhcCC--CCCcE
Confidence 99999776421111 289999999999887654310 00 112222 24589
Q ss_pred EEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccEEEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
|+|+||+.+.||++.+++|++++. +++|+|+|+|+ ....++++..+. ..++.+.+..+.+++..+++.||++++
T Consensus 194 i~~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ 269 (357)
T cd03795 194 FLFVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP--LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVF 269 (357)
T ss_pred EEEecccccccCHHHHHHHHHhcc--CcEEEEEeCCh--hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEe
Confidence 999999999999999999999995 89999999987 555666666433 357888888888888899999999999
Q ss_pred cCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec-CcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 484 PSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 484 pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
||. .|++|++++|||++|+|||+++.++..+.+.+ +.+|+++ ++.|+++++++|.+++++ ++.++
T Consensus 270 ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~----------~~~d~~~~~~~i~~l~~~--~~~~~ 337 (357)
T cd03795 270 PSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVV----------PPGDPAALAEAIRRLLED--PELRE 337 (357)
T ss_pred CCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEe----------CCCCHHHHHHHHHHHHHC--HHHHH
Confidence 996 49999999999999999999999999998886 8899976 899999999999999998 66667
Q ss_pred HHHHHH---HHhhcCcHHHH
Q 007212 561 EMMKNG---MAQDLSWKGPA 577 (612)
Q Consensus 561 ~~~~~~---~~~~fsw~~~a 577 (612)
+|++++ +.+.|||+.++
T Consensus 338 ~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 338 RLGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHHhcchHhhC
Confidence 777666 57899999764
No 40
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=4.9e-32 Score=286.12 Aligned_cols=383 Identities=20% Similarity=0.210 Sum_probs=259.6
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. .||.+.++..++++|+++||+|+++++............ .......|++++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG---------------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc---------------ceEEecCCeEEE
Confidence 799999998886 599999999999999999999999997633221110000 111233466666
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCC-cccchH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDW-HTSLIP 244 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~-~~~~~~ 244 (612)
.+........ .+......+..+.......+.... .+||+ +|+|.+ .....+
T Consensus 64 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~D~-v~~~~~~~~~~~~ 115 (394)
T cd03794 64 RVPLPPYKKN----------------GLLKRLLNYLSFALSALLALLKRR-----------RRPDV-IIATSPPLLIALA 115 (394)
T ss_pred EEecCCCCcc----------------chHHHHHhhhHHHHHHHHHHHhcc-----------cCCCE-EEEcCChHHHHHH
Confidence 5543221110 011111222222222333222111 25896 777752 222222
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
....... .++|+++++|+..+....... ..... .........+++..++.+|.++++
T Consensus 116 ~~~~~~~------~~~~~i~~~h~~~~~~~~~~~-----~~~~~------------~~~~~~~~~~~~~~~~~~d~vi~~ 172 (394)
T cd03794 116 ALLLARL------KGAPFVLEVRDLWPESAVALG-----LLKNG------------SLLYRLLRKLERLIYRRADAIVVI 172 (394)
T ss_pred HHHHHHh------cCCCEEEEehhhcchhHHHcc-----Ccccc------------chHHHHHHHHHHHHHhcCCEEEEE
Confidence 2222221 488999999976432111000 00000 000001223456778899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+.. .+... .++.+||||+|...+.+.... .. +.+.... .+.+
T Consensus 173 s~~~~~~~~~---~~~~~------~~~~~i~~~~~~~~~~~~~~~-------------------~~-~~~~~~~--~~~~ 221 (394)
T cd03794 173 SPGMREYLVR---RGVPP------EKISVIPNGVDLELFKPPPAD-------------------ES-LRKELGL--DDKF 221 (394)
T ss_pred CHHHHHHHHh---cCCCc------CceEEcCCCCCHHHcCCccch-------------------hh-hhhccCC--CCcE
Confidence 9999999873 34332 389999999998877655321 11 2222222 3558
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHH-CCCceEEEeccChHHHHHHHHhccEEE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEIL-YPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~-~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
+|+|+|++.++||++.+++++.++.+ ++++|+|+|.|+ ..+.++++... ...++.+.+..+.+++..+++.||+++
T Consensus 222 ~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i 299 (394)
T cd03794 222 VVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGP--EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVGL 299 (394)
T ss_pred EEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcc--cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCeeE
Confidence 99999999999999999999999976 489999999987 34444444332 224688888778888889999999999
Q ss_pred EcCCCCCC-----cHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHH
Q 007212 483 IPSRFEPC-----GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 557 (612)
Q Consensus 483 ~pS~~E~~-----gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 557 (612)
+|+..|++ |++++|||++|+|||+++.++..+++.++.+|+++ ++.|+++++++|.+++++ ++
T Consensus 300 ~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~ 367 (394)
T cd03794 300 VPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVV----------PPGDPEALAAAILELLDD--PE 367 (394)
T ss_pred EeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEe----------CCCCHHHHHHHHHHHHhC--hH
Confidence 99998865 88899999999999999999999999998899976 889999999999999987 66
Q ss_pred HHHHHHHHH---HHhhcCcHHHHHHHH
Q 007212 558 ALAEMMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 558 ~~~~~~~~~---~~~~fsw~~~a~~~~ 581 (612)
.+.++++++ ..++|||+.++++|+
T Consensus 368 ~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 368 ERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 677777666 467999999999873
No 41
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-33 Score=280.51 Aligned_cols=368 Identities=20% Similarity=0.261 Sum_probs=265.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
++|+.|+.+|+|. .||++..++.|++.|-+.||.|.++|-.|++... + +...+|.++
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~g------------------i---rylt~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG------------------I---RYLTNGLKV 57 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCccc------------------e---eeecCCceE
Confidence 5899999999997 9999999999999999999999999998874322 2 234467888
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
|+++....+.. .|-..+|+. +.++- ..+.. ++.. |+|.|.-.+.+.-
T Consensus 58 yylp~~v~~n~---tT~ptv~~~------------~Pllr----~i~lr-------------E~I~-ivhghs~fS~lah 104 (426)
T KOG1111|consen 58 YYLPAVVGYNQ---TTFPTVFSD------------FPLLR----PILLR-------------ERIE-IVHGHSPFSYLAH 104 (426)
T ss_pred EEEeeeeeecc---cchhhhhcc------------Ccccc----hhhhh-------------hceE-EEecCChHHHHHH
Confidence 88865543321 111112211 11110 01111 1235 5888865444443
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
-.+.... ..|.++|||-|.+ |.+.++.....+ ..+...+...|++||+
T Consensus 105 e~l~har-----tMGlktVfTdHSl-----fGfad~~si~~n----------------------~ll~~sL~~id~~IcV 152 (426)
T KOG1111|consen 105 EALMHAR-----TMGLKTVFTDHSL-----FGFADIGSILTN----------------------KLLPLSLANIDRIICV 152 (426)
T ss_pred HHHHHHH-----hcCceEEEecccc-----ccccchhhhhhc----------------------ceeeeeecCCCcEEEE
Confidence 3332221 1478999999953 333333222111 1234457789999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|..-++...=. -. +...++.+|||.++...|.|.... - .+.+..
T Consensus 153 shtskentvlr--~~------L~p~kvsvIPnAv~~~~f~P~~~~---------------------------~-~S~~i~ 196 (426)
T KOG1111|consen 153 SHTSKENTVLR--GA------LAPAKVSVIPNAVVTHTFTPDAAD---------------------------K-PSADII 196 (426)
T ss_pred eecCCCceEEE--ec------cCHhHeeeccceeeccccccCccc---------------------------c-CCCCee
Confidence 98776654421 12 223499999999999999995321 1 123457
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCCh--hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
.|+.++||..+||+|.|+++++++.+ ++++|+|+|+|++ .+++.++++..+ +++.+.+..+.+...+.+...|+
T Consensus 197 ~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l~--~rV~~lG~v~h~~Vr~vl~~G~I 274 (426)
T KOG1111|consen 197 TIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFLQ--DRVVMLGTVPHDRVRDVLVRGDI 274 (426)
T ss_pred EEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhcc--CceEEecccchHHHHHHHhcCcE
Confidence 89999999999999999999999987 8999999999994 566666666544 56999999999999999999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
|++||..|+||++++|||+||+|||+++.||++|++.++ +++ ....++++++++++.++...... -
T Consensus 275 FlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d---~i~---------~~~~~~~dl~~~v~~ai~~~~~~--p 340 (426)
T KOG1111|consen 275 FLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED---MIT---------LGEPGPDDLVGAVEKAITKLRTL--P 340 (426)
T ss_pred EeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc---cee---------ccCCChHHHHHHHHHHHHHhccC--c
Confidence 999999999999999999999999999999999999875 221 26778999999999998863221 1
Q ss_pred HHHHHHHHhhcCcHHHHHHHHHHHHHHHHcCC
Q 007212 561 EMMKNGMAQDLSWKGPAKKWEETLLNLEVAGS 592 (612)
Q Consensus 561 ~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~~~ 592 (612)
.-..+...+.|+|+..+++.+++|.++.....
T Consensus 341 ~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~~ 372 (426)
T KOG1111|consen 341 LEFHDRVKKMYSWKDVAERTEKVYDRAATTSI 372 (426)
T ss_pred hhHHHHHHHhccHHHHHHHHHHHHHHHhhccC
Confidence 11123356789999999999999999987653
No 42
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=3.5e-32 Score=286.09 Aligned_cols=367 Identities=22% Similarity=0.255 Sum_probs=248.7
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. .||.+.++.+|+++|+++||+|+++++............ ++...
T Consensus 1 kIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 56 (375)
T cd03821 1 KILHVIPSFDPK--YGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALN----------------------GVPVK 56 (375)
T ss_pred CeEEEcCCCCcc--cCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhcc----------------------Cceee
Confidence 799999998775 899999999999999999999999997643222110000 00000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCC-CcccchH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAND-WHTSLIP 244 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~-~~~~~~~ 244 (612)
.... .... .. ....+ .+............ .+||+ +|+|+ |......
T Consensus 57 ~~~~--~~~~--------~~----------~~~~~-~~~~~~~~~~~~~~-----------~~~di-i~~~~~~~~~~~~ 103 (375)
T cd03821 57 LFSI--NVAY--------GL----------NLARY-LFPPSLLAWLRLNI-----------READI-VHVHGLWSYPSLA 103 (375)
T ss_pred eccc--chhh--------hh----------hhhhh-ccChhHHHHHHHhC-----------CCCCE-EEEecccchHHHH
Confidence 0000 0000 00 00000 00001111111111 24795 88886 4433222
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
....... .+.|++++.|+.......... .+... .......+..+..++.+++.
T Consensus 104 ~~~~~~~------~~~~~i~~~~~~~~~~~~~~~-----~~~~~----------------~~~~~~~~~~~~~~~~i~~~ 156 (375)
T cd03821 104 AARAARK------YGIPYVVSPHGMLDPWALPHK-----ALKKR----------------LAWFLFERRLLQAAAAVHAT 156 (375)
T ss_pred HHHHHHH------hCCCEEEEccccccccccccc-----hhhhH----------------HHHHHHHHHHHhcCCEEEEC
Confidence 2221111 488999999965431110000 00000 00112345567789999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|......+... + ...++.+||||+|.+.+.+... .. .++..+.+. +.+
T Consensus 157 s~~~~~~~~~~---~-------~~~~~~vi~~~~~~~~~~~~~~-------------------~~-~~~~~~~~~--~~~ 204 (375)
T cd03821 157 SEQEAAEIRRL---G-------LKAPIAVIPNGVDIPPFAALPS-------------------RG-RRRKFPILP--DKR 204 (375)
T ss_pred CHHHHHHHHhh---C-------CcccEEEcCCCcChhccCcchh-------------------hh-hhhhccCCC--CCc
Confidence 98877776641 1 1238999999999988866431 11 145555543 458
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
+|+|+||+.+.||++.+++|+..+.+ ++++|+++|.++......++.+..++ .+++.+.+..+.++...+++.||+
T Consensus 205 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv 284 (375)
T cd03821 205 IILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADL 284 (375)
T ss_pred EEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCE
Confidence 99999999999999999999999976 69999999998766666666653433 356888888888888899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
+++||..|+||++++|||+||+|||+++.+|..+++.+ .+|+++ +.+.++++++|.+++++ ++.+.
T Consensus 285 ~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~i~~l~~~--~~~~~ 350 (375)
T cd03821 285 FVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV-----------DDDVDALAAALRRALEL--PQRLK 350 (375)
T ss_pred EEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe-----------CCChHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999999999999999999999998 788864 45669999999999998 45666
Q ss_pred HHHHHH---HHhhcCcHHHHHHHHH
Q 007212 561 EMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 561 ~~~~~~---~~~~fsw~~~a~~~~~ 582 (612)
++++++ +.++|||+.++++|++
T Consensus 351 ~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 351 AMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 666655 5899999999999863
No 43
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=7.7e-32 Score=282.71 Aligned_cols=357 Identities=19% Similarity=0.216 Sum_probs=245.7
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+++++.++| ...||.+.++..|+++|+++||+|+++++............ +....
T Consensus 1 kIl~i~~~~~~-~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 57 (359)
T cd03823 1 RILVVNHLYPP-RSVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVI----------------------GVVVY 57 (359)
T ss_pred CeeEEcccCCc-ccccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccc----------------------cceee
Confidence 79999999888 45699999999999999999999999998744322211000 00000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
......... ..... ..+.........+.....+.++.. +||+ +|+|.+.......
T Consensus 58 ~~~~~~~~~-------~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-------------~~di-i~~~~~~~~~~~~ 112 (359)
T cd03823 58 GRPIDEVLR-------SALPR----DLFHLSDYDNPAVVAEFARLLEDF-------------RPDV-VHFHHLQGLGVSI 112 (359)
T ss_pred ccccccccC-------CCchh----hhhHHHhccCHHHHHHHHHHHHHc-------------CCCE-EEECCccchHHHH
Confidence 000000000 00000 000000000011222333333332 4895 8888763332222
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
...... .++|+++++|+....... ........|.++++|
T Consensus 113 ~~~~~~------~~~~~i~~~hd~~~~~~~-----------------------------------~~~~~~~~d~ii~~s 151 (359)
T cd03823 113 LRAARD------RGIPIVLTLHDYWLICPR-----------------------------------QGLFKKGGDAVIAPS 151 (359)
T ss_pred HHHHHh------cCCCEEEEEeeeeeecch-----------------------------------hhhhccCCCEEEEeC
Confidence 211111 378999999964321100 000112239999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+ .+... .++.+|+||+|...+.+... +.+ .+.++
T Consensus 152 ~~~~~~~~~---~~~~~------~~~~vi~n~~~~~~~~~~~~---------------------------~~~--~~~~~ 193 (359)
T cd03823 152 RFLLDRYVA---NGLFA------EKISVIRNGIDLDRAKRPRR---------------------------APP--GGRLR 193 (359)
T ss_pred HHHHHHHHH---cCCCc------cceEEecCCcChhhcccccc---------------------------CCC--CCceE
Confidence 999999886 34322 28999999999987755321 112 24579
Q ss_pred EEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcC
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 485 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS 485 (612)
|+|+|++.+.||++.++++++.+.+++++|+++|.+.......... ....++.+.+.++.+++..+++.||++++||
T Consensus 194 i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps 270 (359)
T cd03823 194 FGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPS 270 (359)
T ss_pred EEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcC
Confidence 9999999999999999999999976799999999987433322222 3345688888888888889999999999999
Q ss_pred C-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007212 486 R-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 486 ~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 564 (612)
. .|++|++++|||+||+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.++++
T Consensus 271 ~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~~~~~~~ 338 (359)
T cd03823 271 IWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLF----------PPGDAEDLAAALERLIDD--PDLLERLRA 338 (359)
T ss_pred cccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEE----------CCCCHHHHHHHHHHHHhC--hHHHHHHHH
Confidence 8 699999999999999999999999999999999899987 999999999999999997 677778877
Q ss_pred HHHHhhcCcHHHHHHHHHHHH
Q 007212 565 NGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 565 ~~~~~~fsw~~~a~~~~~~y~ 585 (612)
++.. .++.+.++++|+++|+
T Consensus 339 ~~~~-~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 339 GIEP-PRSIEDQAEEYLKLYR 358 (359)
T ss_pred hHHH-hhhHHHHHHHHHHHhh
Confidence 7643 3445999999999886
No 44
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=6.2e-32 Score=285.52 Aligned_cols=349 Identities=15% Similarity=0.105 Sum_probs=238.2
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+++++.+ + .||.+.++.+++++|.+.||+|+++++..... .+.. .....|++++
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~--~~~~------------------~~~~~~~~~~ 56 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEG--DYDD------------------EIEKLGGKIY 56 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCc--chHH------------------HHHHcCCeEE
Confidence 799999876 3 79999999999999999999999999874321 0000 0011234443
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+.... . ... .+.....+.++.. +||+ +|+|......++.
T Consensus 57 ~~~~~~--~---------------------~~~---~~~~~~~~~~~~~-------------~~Dv-v~~~~~~~~~~~~ 96 (358)
T cd03812 57 YIPARK--K---------------------NPL---KYFKKLYKLIKKN-------------KYDI-VHVHGSSASGFIL 96 (358)
T ss_pred EecCCC--c---------------------cHH---HHHHHHHHHHhcC-------------CCCE-EEEeCcchhHHHH
Confidence 321100 0 011 1112222333332 4895 8998766555555
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
.+.... ....++++.|+..+....... ......+.+..++.+|.++++|
T Consensus 97 ~~~~~~------~~~~~v~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~i~~s 145 (358)
T cd03812 97 LAAKKA------GVKVRIAHSHNTSDSHDKKKK-------------------------ILKYKVLRKLINRLATDYLACS 145 (358)
T ss_pred HHHhhC------CCCeEEEEeccccccccccch-------------------------hhHHHHHHHHHHhcCCEEEEcC
Confidence 444332 233456778865432211000 0000122455677899999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+. .. ..++.+||||+|.+.+.+.... ++. +++.+... +.++
T Consensus 146 ~~~~~~~~~~----~~------~~~~~vi~ngvd~~~~~~~~~~------------------~~~-~~~~~~~~--~~~~ 194 (358)
T cd03812 146 EEAGKWLFGK----VK------NKKFKVIPNGIDLEKFIFNEEI------------------RKK-RRELGILE--DKFV 194 (358)
T ss_pred HHHHHHHHhC----CC------cccEEEEeccCcHHHcCCCchh------------------hhH-HHHcCCCC--CCEE
Confidence 9999988752 12 2389999999999877654320 111 44455443 4589
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
|+|+||+.++||++.+++|+..+.+ ++++++|+|+|+ ..+.+++...++ ++++.+.+. .+++..+++.||++
T Consensus 195 i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~ 270 (358)
T cd03812 195 IGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE--LEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVF 270 (358)
T ss_pred EEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEE
Confidence 9999999999999999999999975 699999999988 455566665444 356776665 44566899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
|+||+.|++|++++|||++|+|||+|+.||..|++.++ .|++. .++++++++++|.+++++ ++..+.
T Consensus 271 v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~-~~~~~----------~~~~~~~~a~~i~~l~~~--~~~~~~ 337 (358)
T cd03812 271 LFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDL-VKFLS----------LDESPEIWAEEILKLKSE--DRRERS 337 (358)
T ss_pred EecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccC-ccEEe----------CCCCHHHHHHHHHHHHhC--cchhhh
Confidence 99999999999999999999999999999999999984 45543 667899999999999998 556666
Q ss_pred HHHHHHHhhcCcHHHH
Q 007212 562 MMKNGMAQDLSWKGPA 577 (612)
Q Consensus 562 ~~~~~~~~~fsw~~~a 577 (612)
+..++..+..+++...
T Consensus 338 ~~~~~~~~~~~~~~~~ 353 (358)
T cd03812 338 SESIKKKGLDADDEAN 353 (358)
T ss_pred hhhhhhccchhhhhhh
Confidence 6666655544554443
No 45
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=1.5e-31 Score=281.56 Aligned_cols=365 Identities=22% Similarity=0.297 Sum_probs=254.0
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..|+|. .||.+..+..++++|+++||+|+++++............ ++...
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEVV----------------------VVRPF 56 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCcccccc----------------------ccccc
Confidence 799999999887 899999999999999999999999998754322210000 00000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCC-CcccchH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAND-WHTSLIP 244 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~-~~~~~~~ 244 (612)
..... ...+ ....+ .+.....+.++.. +||+ +|+|. +..+...
T Consensus 57 ~~~~~-~~~~--------------------~~~~~-~~~~~~~~~~~~~-------------~~Di-v~~~~~~~~~~~~ 100 (374)
T cd03817 57 RVPTF-KYPD--------------------FRLPL-PIPRALIIILKEL-------------GPDI-VHTHTPFSLGLLG 100 (374)
T ss_pred ccccc-hhhh--------------------hhccc-cHHHHHHHHHhhc-------------CCCE-EEECCchhhhhHH
Confidence 00000 0000 00000 1111222223332 4895 77775 3333333
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh-HHHHHHHhhCCEEEe
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLT 323 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~l~~ad~vi~ 323 (612)
..+... .++|+++++|+.... +. .......... ..... .+++..+..+|.+++
T Consensus 101 ~~~~~~-------~~~~~i~~~~~~~~~--~~----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~d~i~~ 154 (374)
T cd03817 101 LRVARK-------LGIPVVATYHTMYED--YT----HYVPLGRLLA-------------RAVVRRKLSRRFYNRCDAVIA 154 (374)
T ss_pred HHHHHH-------cCCCEEEEecCCHHH--HH----HHHhcccchh-------------HHHHHHHHHHHHhhhCCEEEe
Confidence 333333 488999999965320 00 0000000000 00111 356778889999999
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
+|+..++.+.. ++.. .++.++|||+|...+.+... ...++++++.. +.
T Consensus 155 ~s~~~~~~~~~---~~~~-------~~~~vi~~~~~~~~~~~~~~--------------------~~~~~~~~~~~--~~ 202 (374)
T cd03817 155 PSEKIADLLRE---YGVK-------RPIEVIPTGIDLDRFEPVDG--------------------DDERRKLGIPE--DE 202 (374)
T ss_pred ccHHHHHHHHh---cCCC-------CceEEcCCccchhccCccch--------------------hHHHHhcCCCC--CC
Confidence 99999998875 3432 26899999999988766431 22245555543 45
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhcc
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
++|+|+|++.+.||++.++++++.+.+ ++++|+++|.|+ ..+.++++..++ .+++.+.+..+.+++..+++.||
T Consensus 203 ~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 280 (374)
T cd03817 203 PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVIFTGFVPREELPDYYKAAD 280 (374)
T ss_pred eEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcC
Confidence 899999999999999999999999876 789999999987 455566665443 35688888888888889999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 559 (612)
++++||..|++|++++|||++|+|||+++.|+..|++.++.+|+++ ++.|. +++++|.+++++ ++.+
T Consensus 281 ~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~-~~~~~i~~l~~~--~~~~ 347 (374)
T cd03817 281 LFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLF----------PPGDE-ALAEALLRLLQD--PELR 347 (374)
T ss_pred EEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEe----------CCCCH-HHHHHHHHHHhC--hHHH
Confidence 9999999999999999999999999999999999999999999986 77777 999999999998 6666
Q ss_pred HHHHHHHH--HhhcCcHHHHHHHHHHHHH
Q 007212 560 AEMMKNGM--AQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 560 ~~~~~~~~--~~~fsw~~~a~~~~~~y~~ 586 (612)
+++++++. .++++ .+++++++|++
T Consensus 348 ~~~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 348 RRLSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 77777763 34444 66777777765
No 46
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=1.7e-31 Score=281.34 Aligned_cols=341 Identities=20% Similarity=0.220 Sum_probs=247.1
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+|++..|+| |.+.++.+++++|.++||+|+|+++.........+.. . ..+..+
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~~--------------~-----~~~~~~- 55 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHPED--------------R-----AELART- 55 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCcccccccccc--------------c-----ccccch-
Confidence 79999998755 2677899999999999999999998743211100000 0 000000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
. |......+..+.......++. .+||+ +|+|.+.......
T Consensus 56 ------------------~--------~~~~~~~~~~~~~~~~~~~~~-------------~~~Di-i~~~~~~~~~~~~ 95 (355)
T cd03799 56 ------------------R--------YLARSLALLAQALVLARELRR-------------LGIDH-IHAHFGTTPATVA 95 (355)
T ss_pred ------------------H--------HHHHHHHHHHHHHHHHHHHHh-------------cCCCE-EEECCCCchHHHH
Confidence 0 000111111112222222222 24895 9999765544444
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
.+.... .+.|+++++|+...... ....+++..++.+|.++++|
T Consensus 96 ~~~~~~------~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~vi~~s 138 (355)
T cd03799 96 MLASRL------GGIPYSFTAHGKDIFRS-------------------------------PDAIDLDEKLARADFVVAIS 138 (355)
T ss_pred HHHHHh------cCCCEEEEEeccccccc-------------------------------CchHHHHHHHhhCCEEEECC
Confidence 444332 37899999995432110 00134677788999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+. +|.... ++.+||||+|.+.+.+... . ...+.+.
T Consensus 139 ~~~~~~l~~~--~~~~~~------~~~vi~~~~d~~~~~~~~~---------------------------~--~~~~~~~ 181 (355)
T cd03799 139 EYNRQQLIRL--LGCDPD------KIHVVHCGVDLERFPPRPP---------------------------P--PPGEPLR 181 (355)
T ss_pred HHHHHHHHHh--cCCCcc------cEEEEeCCcCHHHcCCccc---------------------------c--ccCCCeE
Confidence 9999999862 244333 8999999999887765420 0 1124578
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
|+|+|++.+.||++.+++++..+.+ ++++|+++|.++ ..+.+++...++ ++++.+.+..+.+++..+++.||++
T Consensus 182 i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~ 259 (355)
T cd03799 182 ILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP--LRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLF 259 (355)
T ss_pred EEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc--cHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEE
Confidence 9999999999999999999999876 589999999987 344555555543 4568888888888889999999999
Q ss_pred EEcCCC------CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 482 LIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 482 v~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
++||.. |++|++++|||++|+|+|+++.|+..|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 260 l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~-- 327 (355)
T cd03799 260 VLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLV----------PPGDPEALADAIERLLDD-- 327 (355)
T ss_pred EecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEe----------CCCCHHHHHHHHHHHHhC--
Confidence 999999 99999999999999999999999999999999899976 888999999999999998
Q ss_pred HHHHHHHHHHH---HHhhcCcHHHHHH
Q 007212 556 TQALAEMMKNG---MAQDLSWKGPAKK 579 (612)
Q Consensus 556 ~~~~~~~~~~~---~~~~fsw~~~a~~ 579 (612)
+..+.++++++ +.++|||+..+++
T Consensus 328 ~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 328 PELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 66677777766 4688999998875
No 47
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=1.1e-31 Score=302.08 Aligned_cols=227 Identities=16% Similarity=0.158 Sum_probs=173.6
Q ss_pred CCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCC
Q 007212 318 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 318 ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl 397 (612)
++.+++.|...++.+.. .+|++.+ ++.+||||+|...|.+... ....+..+..
T Consensus 459 ~~i~Vs~S~~~~~~l~~--~~g~~~~------kI~VI~NGVd~~~f~~~~~-------------------~~~~~~~~~~ 511 (694)
T PRK15179 459 GVALSSNSQFAAHRYAD--WLGVDER------RIPVVYNGLAPLKSVQDDA-------------------CTAMMAQFDA 511 (694)
T ss_pred CeEEEeCcHHHHHHHHH--HcCCChh------HEEEECCCcCHHhcCCCch-------------------hhHHHHhhcc
Confidence 45667777877777664 2566544 8999999999887765321 0111111211
Q ss_pred CCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHH
Q 007212 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHM 473 (612)
Q Consensus 398 ~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ 473 (612)
....+.++|+++||+.++||++.+++|++++.+ ++++|+|+|+|+ ..+.++++..+++ ++|.+.+. .. .+..
T Consensus 512 ~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l~~~lgL~~~V~flG~-~~-dv~~ 587 (694)
T PRK15179 512 RTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREFAQRLGMGERILFTGL-SR-RVGY 587 (694)
T ss_pred ccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHHHHHcCCCCcEEEcCC-cc-hHHH
Confidence 112245799999999999999999999998864 789999999987 5667777777654 56766554 33 4568
Q ss_pred HHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCC--HHHHHHHHHHHH
Q 007212 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRAL 551 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~i~~ll 551 (612)
+|+.+|++|+||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++ +++| .++++++|.+++
T Consensus 588 ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv----------~~~d~~~~~La~aL~~ll 657 (694)
T PRK15179 588 WLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL----------PADTVTAPDVAEALARIH 657 (694)
T ss_pred HHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEe----------CCCCCChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999986 7666 468999998888
Q ss_pred HhhC-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 552 ATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 552 ~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
.+.. .+.+.+.+++...++|||+.++++|+++|+
T Consensus 658 ~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 658 DMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred hChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 7532 133333444445689999999999999995
No 48
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=4.3e-31 Score=275.72 Aligned_cols=367 Identities=26% Similarity=0.382 Sum_probs=262.4
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..++|. .||...++..|+++|.+.||+|.++++............ .....
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~----------------------~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVG----------------------GIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeec----------------------Cccee
Confidence 799999998885 799999999999999999999999998744322210000 00000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.. ... . ..+ ...............++.. +||+ +|+|.+.......
T Consensus 57 ~~--~~~-~--------~~~----------~~~~~~~~~~~~~~~~~~~-------------~~Di-i~~~~~~~~~~~~ 101 (374)
T cd03801 57 RP--PPL-L--------RVR----------RLLLLLLLALRLRRLLRRE-------------RFDV-VHAHDWLALLAAA 101 (374)
T ss_pred cC--Ccc-c--------ccc----------hhHHHHHHHHHHHHHhhhc-------------CCcE-EEEechhHHHHHH
Confidence 00 000 0 000 0011111222223333332 4895 8888777666554
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
..... .+.|+++++|+..+...... .. ........+.+..++.+|.++++|
T Consensus 102 ~~~~~-------~~~~~i~~~h~~~~~~~~~~---------~~-------------~~~~~~~~~~~~~~~~~d~~i~~s 152 (374)
T cd03801 102 LAARL-------LGIPLVLTVHGLEFGRPGNE---------LG-------------LLLKLARALERRALRRADRIIAVS 152 (374)
T ss_pred HHHHh-------cCCcEEEEeccchhhccccc---------hh-------------HHHHHHHHHHHHHHHhCCEEEEec
Confidence 33322 58999999997655221110 00 000112344566788999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+. ++.+.+ ++.++|||+|...+.+.. ...+.....+ .+.++
T Consensus 153 ~~~~~~~~~~--~~~~~~------~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~--~~~~~ 201 (374)
T cd03801 153 EATREELREL--GGVPPE------KITVIPNGVDTERFRPAP---------------------RAARRRLGIP--EDEPV 201 (374)
T ss_pred HHHHHHHHhc--CCCCCC------cEEEecCcccccccCccc---------------------hHHHhhcCCc--CCCeE
Confidence 9999999862 332222 899999999988775531 1122222222 34579
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHH--CCCceEEEeccChHHHHHHHHhccEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
|+|+|++.+.||++.+++++..+.+ ++++|+++|.+. ..+.++++..+ .+.++.+.+..+.+++..+++.||++
T Consensus 202 i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~ 279 (374)
T cd03801 202 ILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVF 279 (374)
T ss_pred EEEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEE
Confidence 9999999999999999999999876 589999999776 45555555433 34578888888888888999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
++|+..|++|++++|||++|+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.+
T Consensus 280 i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~ 347 (374)
T cd03801 280 VLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLV----------PPGDPEALAEAILRLLDD--PELRRR 347 (374)
T ss_pred EecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEe----------CCCCHHHHHHHHHHHHcC--hHHHHH
Confidence 99999999999999999999999999999999999988999987 889999999999999998 666677
Q ss_pred HHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 562 MMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
+++++ ..+.|||+..++++.++|+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 348 LGEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 77765 4799999999999999873
No 49
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=3.7e-31 Score=278.94 Aligned_cols=349 Identities=21% Similarity=0.244 Sum_probs=241.0
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+||+.+ +|. .||.+.++.+|+++|+++||+|.+++........ ..... . .+....
T Consensus 1 kI~~v~~~-~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~--~~~~~----------~--------~~~~~~ 57 (366)
T cd03822 1 RIALVSPY-PPR--KCGIATFTTDLVNALSARGPDVLVVSVAALYPSL--LYGGE----------Q--------EVVRVI 57 (366)
T ss_pred CeEEecCC-CCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcc--cCCCc----------c--------cceeee
Confidence 79999876 454 7999999999999999999999999866321111 00000 0 000000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
. .+ +. .......+.++.. +||+ +|+|.|...+.+.
T Consensus 58 -~----------------~~----------~~----~~~~~~~~~~~~~-------------~~di-i~~~~~~~~~~~~ 92 (366)
T cd03822 58 -V----------------LD----------NP----LDYRRAARAIRLS-------------GPDV-VVIQHEYGIFGGE 92 (366)
T ss_pred -e----------------cC----------Cc----hhHHHHHHHHhhc-------------CCCE-EEEeeccccccch
Confidence 0 00 00 0111222333332 4895 7887765433222
Q ss_pred H---HHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 246 Y---LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 246 ~---l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
. +....+ ..+.|+|+++|+...... ......+++..++.+|.++
T Consensus 93 ~~~~~~~~~~----~~~~~~i~~~h~~~~~~~-----------------------------~~~~~~~~~~~~~~~d~ii 139 (366)
T cd03822 93 AGLYLLLLLR----GLGIPVVVTLHTVLLHEP-----------------------------RPGDRALLRLLLRRADAVI 139 (366)
T ss_pred hhHHHHHHHh----hcCCCEEEEEecCCcccc-----------------------------chhhhHHHHHHHhcCCEEE
Confidence 2 221111 148899999997511000 0012234566788999999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
++|....+.+... .+ ..++.+|+||+|...+.+... . ++...+ .+
T Consensus 140 ~~s~~~~~~~~~~--~~--------~~~~~~i~~~~~~~~~~~~~~---------------------~--~~~~~~--~~ 184 (366)
T cd03822 140 VMSSELLRALLLR--AY--------PEKIAVIPHGVPDPPAEPPES---------------------L--KALGGL--DG 184 (366)
T ss_pred EeeHHHHHHHHhh--cC--------CCcEEEeCCCCcCcccCCchh---------------------h--HhhcCC--CC
Confidence 9974444444321 11 128999999999876654311 0 222222 24
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHH-------HHHHHHHCCCceEEEec-cChHHHH
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQ-------LEQLEILYPEKARGVAK-FNIPLAH 472 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~-------l~~l~~~~~~~v~~~~~-~~~~~~~ 472 (612)
.++|+|+|++.+.||++.+++|+.++.+ ++++|+|+|.+....... ++++ ....++.+.+. .+.+++.
T Consensus 185 ~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~--~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 185 RPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERL--GLADRVIFINRYLPDEELP 262 (366)
T ss_pred CeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhc--CCCCcEEEecCcCCHHHHH
Confidence 5899999999999999999999999976 689999999976433222 2232 23457888888 5778888
Q ss_pred HHHHhccEEEEcCCCC--CCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHH
Q 007212 473 MIIAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~E--~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~l 550 (612)
.+++.||++++||.+| ++|++++|||++|+|||+++.|+ .+.+.++.+|+++ ++.|+++++++|..+
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~----------~~~d~~~~~~~l~~l 331 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLV----------PPGDPAALAEAIRRL 331 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEE----------cCCCHHHHHHHHHHH
Confidence 9999999999999999 99999999999999999999999 7778888899987 899999999999999
Q ss_pred HHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHH
Q 007212 551 LATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~ 585 (612)
+++ ++.+.++++++ ..+.|||+.++++|.++|+
T Consensus 332 ~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 332 LAD--PELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred HcC--hHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 998 66777777776 3455999999999999873
No 50
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=6.5e-31 Score=286.30 Aligned_cols=229 Identities=14% Similarity=0.102 Sum_probs=182.6
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
+.....+|.+++.|++.++.+.+. ++. . .++.+|+||+|...+.....
T Consensus 215 ~~~~~~ad~ii~nS~~t~~~l~~~--~~~-~------~~i~vvyp~vd~~~~~~~~~----------------------- 262 (463)
T PLN02949 215 GLVGRCAHLAMVNSSWTKSHIEAL--WRI-P------ERIKRVYPPCDTSGLQALPL----------------------- 262 (463)
T ss_pred HHHcCCCCEEEECCHHHHHHHHHH--cCC-C------CCeEEEcCCCCHHHcccCCc-----------------------
Confidence 445578999999999999998762 222 1 27899999999765532110
Q ss_pred HHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC----hhHHHHHHHHHHHC--CCc
Q 007212 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILY--PEK 459 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~--~~~ 459 (612)
....+.+.++++||++++||++.+|+|++++.+ ++++|+|+|++. .++.+++++++.++ .++
T Consensus 263 ------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 263 ------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred ------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCc
Confidence 011234789999999999999999999998643 589999999874 23456777777765 367
Q ss_pred eEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc-cceec---CcceEEecccccccccC
Q 007212 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 460 v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~---g~~G~~~~~~~~~~~~v 535 (612)
+.+.+..+.+++..+|+.||++++||..|+||++++|||++|+|||+++.||.. |++.+ +.+|+++
T Consensus 337 V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~---------- 406 (463)
T PLN02949 337 VEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA---------- 406 (463)
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC----------
Confidence 889888888888899999999999999999999999999999999999999875 77765 6789953
Q ss_pred CCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHHcC
Q 007212 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 536 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~~~ 591 (612)
.|+++++++|.+++++. ++.+++|++++ ..++|||+.++++|++.|.++++.+
T Consensus 407 --~~~~~la~ai~~ll~~~-~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~~ 461 (463)
T PLN02949 407 --TTVEEYADAILEVLRMR-ETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNSA 461 (463)
T ss_pred --CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhh
Confidence 49999999999999852 45566676665 2477999999999999999988654
No 51
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.9e-31 Score=281.07 Aligned_cols=359 Identities=19% Similarity=0.195 Sum_probs=251.2
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+.|. ..||++.++.+|+++|+++||+|+++++.............. ...
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~~~---------------------~~~- 57 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLRAA---------------------LRL- 57 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccchhc---------------------ccc-
Confidence 799999998872 489999999999999999999999999874432221100000 000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
..... + .....++............. .+||+ +|+|.+.....
T Consensus 58 -~~~~~-------------~--------~~~~~~~~~~~~~~~~~~~~-------------~~~Di-i~~~~~~~~~~-- 99 (365)
T cd03809 58 -LLRLP-------------R--------RLLWGLLFLLRAGDRLLLLL-------------LGLDL-LHSPHNTAPLL-- 99 (365)
T ss_pred -ccccc-------------c--------ccccchhhHHHHHHHHHhhh-------------cCCCe-eeecccccCcc--
Confidence 00000 0 00000111111111111221 14895 88887665554
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
+ ..+.|+++++|+..+... + ...... .......+++..++.+|.++++|
T Consensus 100 --~--------~~~~~~i~~~hd~~~~~~-~----------~~~~~~----------~~~~~~~~~~~~~~~~d~~i~~s 148 (365)
T cd03809 100 --R--------LRGVPVVVTIHDLIPLRF-P----------EYFSPG----------FRRYFRRLLRRALRRADAIITVS 148 (365)
T ss_pred --c--------CCCCCEEEEeccchhhhC-c----------ccCCHH----------HHHHHHHHHHHHHHHcCEEEEcc
Confidence 1 158999999997654211 0 000000 00112345677889999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+. ++...+ ++.+|+||+|...+.+... .. +...... .+.++
T Consensus 149 ~~~~~~~~~~--~~~~~~------~~~vi~~~~~~~~~~~~~~-------------------~~--~~~~~~~--~~~~~ 197 (365)
T cd03809 149 EATKRDLLRY--LGVPPD------KIVVIPLGVDPRFRPPPAE-------------------AE--VLRALYL--LPRPY 197 (365)
T ss_pred HHHHHHHHHH--hCcCHH------HEEeeccccCccccCCCch-------------------HH--HHHHhcC--CCCCe
Confidence 9999999862 333333 8999999999988765432 11 2222222 24579
Q ss_pred EEEEccCccccCHHHHHHHHHhcccC--CeEEEEEecCChhHHHHHHHHH-HHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLE-ILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~~--~~~lvivG~g~~~~~~~l~~l~-~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
|+|+|++.+.||++.+++++..+.+. +++|+++|.+........+.+. ....+++.+.+..+.+++..+++.||+++
T Consensus 198 i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 198 FLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred EEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhc
Confidence 99999999999999999999999774 6999999987643333333321 22346788888888888999999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 562 (612)
+||.+|++|++++|||++|+|||+++.|++.|++.+ +|+.+ ++.|+++++++|.+++++ ++.+.++
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~ 343 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYF----------DPLDPEALAAAIERLLED--PALREEL 343 (365)
T ss_pred ccchhccCCCCHHHHhcCCCcEEecCCCCccceecC--ceeee----------CCCCHHHHHHHHHHHhcC--HHHHHHH
Confidence 999999999999999999999999999999999864 57755 889999999999999988 6777777
Q ss_pred HHHH--HHhhcCcHHHHHHHH
Q 007212 563 MKNG--MAQDLSWKGPAKKWE 581 (612)
Q Consensus 563 ~~~~--~~~~fsw~~~a~~~~ 581 (612)
++++ ..++|||+..++++.
T Consensus 344 ~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 344 RERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHHHHHHhCCHHHHHHHHh
Confidence 7776 568899999999886
No 52
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=100.00 E-value=7e-33 Score=277.96 Aligned_cols=234 Identities=40% Similarity=0.701 Sum_probs=175.4
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCc-cEEEE--------EEeCCeeeEEEEEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIE--------LKVGDKIEKVRFFH 156 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~ 156 (612)
||++|+.|++|+.++||+++++..|+++|+++||+|.|++|.|+...+.... ....+ +.+.. ...+++++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 7999999999999999999999999999999999999999999877665421 11111 12221 15678888
Q ss_pred eeecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeC
Q 007212 157 CHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAN 236 (612)
Q Consensus 157 ~~~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h 236 (612)
...+||++++++++.++++ ..+|++. +.+|.|+..||.+|+++++++++.+++ +||| ||||
T Consensus 80 ~~~~~v~v~~i~~~~~f~r------~~iY~~~-~~~~~d~~~rf~~fs~a~le~~~~l~~-----------~pDI-IH~h 140 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDR------PGIYGDN-GGDYPDNAERFAFFSRAALELLKKLGW-----------KPDI-IHCH 140 (245)
T ss_dssp EEETTEEEEEEESHHHHGS------SSSSBST-SSBHTTHHHHHHHHHHHHHHHHCTCT------------S-SE-EEEE
T ss_pred EEcCCccEEEecChhhccc------cceeccC-CCcchhHHHHHHHHHHHHHHHHHhhCC-----------CCCE-EEec
Confidence 8889999999999999886 5699876 788999999999999999999999865 4995 8999
Q ss_pred CCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHh
Q 007212 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 316 (612)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~ 316 (612)
|||++++|.+++..++..+.+.++|+++||||+.+||.++...+..++++....... +.+ .....+|++|.++.
T Consensus 141 DW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~---~~~---~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 141 DWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNL---DEY---EFYGQINFLKAGIV 214 (245)
T ss_dssp CGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-ST---TTT---EETTEEEHHHHHHH
T ss_pred CchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccc---ccc---ccccccCHHHHHHH
Confidence 999999999999988777777899999999999999999988888888886432211 111 12357899999999
Q ss_pred hCCEEEecCHHHHHHHHcCcCCCccchhhh
Q 007212 317 ESDMVLTVSPHYAQELVSGEDKGVELDNII 346 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~ 346 (612)
.||.|+|||+.+++++++ ..+|..+++++
T Consensus 215 ~AD~v~TVS~~Ya~Ei~~-~~~g~GL~~~l 243 (245)
T PF08323_consen 215 YADKVTTVSPTYAREIQT-PEFGEGLEGLL 243 (245)
T ss_dssp HSSEEEESSHHHHHHTTS-HHHHTT-HHHH
T ss_pred hcCEeeeCCHHHHHHHhC-cccCCChHHHh
Confidence 999999999999999996 34455555444
No 53
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=1.3e-30 Score=273.07 Aligned_cols=372 Identities=24% Similarity=0.322 Sum_probs=257.9
Q ss_pred EEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007212 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (612)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (612)
|+++++.++| ...||.+.++..++++|.+.||+|+++++............... . ....
T Consensus 1 iLii~~~~p~-~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~~-----------------~---~~~~ 59 (377)
T cd03798 1 ILVISSLYPP-PNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGRL-----------------V---GVER 59 (377)
T ss_pred CeEeccCCCC-CCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhccccc-----------------c---cccc
Confidence 6888888766 24599999999999999999999999998643222211000000 0 0000
Q ss_pred EeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCC-CcccchHH
Q 007212 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVAND-WHTSLIPC 245 (612)
Q Consensus 167 v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~-~~~~~~~~ 245 (612)
...... ... ..........+.......++... .+||+ +|+|. +....+..
T Consensus 60 ~~~~~~-----------~~~------~~~~~~~~~~~~~~~~~~l~~~~-----------~~~di-i~~~~~~~~~~~~~ 110 (377)
T cd03798 60 LPVLLP-----------VVP------LLKGPLLYLLAARALLKLLKLKR-----------FRPDL-IHAHFAYPDGFAAA 110 (377)
T ss_pred cccCcc-----------hhh------ccccchhHHHHHHHHHHHHhccc-----------CCCCE-EEEeccchHHHHHH
Confidence 000000 000 00011122233333444443111 25896 67763 33333333
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
.+... .++|+++++|+........ .......++..+..+|.++++|
T Consensus 111 ~~~~~-------~~~~~i~~~h~~~~~~~~~---------------------------~~~~~~~~~~~~~~~d~ii~~s 156 (377)
T cd03798 111 LLKRK-------LGIPLVVTLHGSDVNLLPR---------------------------KRLLRALLRRALRRADAVIAVS 156 (377)
T ss_pred HHHHh-------cCCCEEEEeecchhcccCc---------------------------hhhHHHHHHHHHhcCCeEEeCC
Confidence 33332 3689999999765421100 0012345677889999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+ .+.. ..++.+++||+|...+.+.... .. ...+.. .+.++
T Consensus 157 ~~~~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~-------------------~~--~~~~~~--~~~~~ 204 (377)
T cd03798 157 EALADELKA---LGID------PEKVTVIPNGVDTERFSPADRA-------------------EA--RKLGLP--EDKKV 204 (377)
T ss_pred HHHHHHHHH---hcCC------CCceEEcCCCcCcccCCCcchH-------------------HH--HhccCC--CCceE
Confidence 999999986 2222 2389999999999888765321 00 222332 34589
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
|+|+|++.+.||++.++++++.+.+ ++++++++|.+. ..+.++++.... ..++.+.+..+.+++..+++.||++
T Consensus 205 i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~ 282 (377)
T cd03798 205 ILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP--LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVF 282 (377)
T ss_pred EEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc--chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCee
Confidence 9999999999999999999999976 589999999987 334455554432 3568888888888888999999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~ 561 (612)
++||..|++|++++|||++|+|+|+++.++..+++.++.+|+++ ++.|+++++++|.++++++.. ....
T Consensus 283 i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~~~-~~~~ 351 (377)
T cd03798 283 VLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLV----------PPGDPEALAEAILRLLADPWL-RLGR 351 (377)
T ss_pred ecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEE----------CCCCHHHHHHHHHHHhcCcHH-HHhH
Confidence 99999999999999999999999999999999999999999977 999999999999999998432 2333
Q ss_pred HHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 562 MMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 562 ~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
.+.....+.|||+..++++.++|+++
T Consensus 352 ~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 352 AARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 33344689999999999999999764
No 54
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=2.2e-30 Score=280.76 Aligned_cols=372 Identities=13% Similarity=0.059 Sum_probs=238.0
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
..+|++++.. -+|.+..+..++++|+++||+|+|++.......+. .....||.
T Consensus 3 ~~~~~~~~~~------~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~---------------------~~~~~~v~ 55 (415)
T cd03816 3 RKRVCVLVLG------DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDE---------------------ILSNPNIT 55 (415)
T ss_pred ccEEEEEEec------ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHH---------------------HhcCCCEE
Confidence 4567777763 35566678899999999999999999763211100 01134666
Q ss_pred EEEEeCcc-ccccccCCCCCcccCCCCCCCCchhhHHH-HHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcc-
Q 007212 164 RVFVDHPW-FLAKVWGKTQSKIYGPRTGEDYQDNQLRF-SLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHT- 240 (612)
Q Consensus 164 ~~~v~~~~-~~~~~~g~~~~~~y~~~~g~~~~~~~~r~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~- 240 (612)
++.+..+. ... ......++ .......+..++.+... .+||+ +|+|.-..
T Consensus 56 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~~Dv-i~~~~~~~~ 107 (415)
T cd03816 56 IHPLPPPPQRLN------------------KLPFLLFAPLKVLWQFFSLLWLLYKL---------RPADY-ILIQNPPSI 107 (415)
T ss_pred EEECCCCccccc------------------cchHHHHHHHHHHHHHHHHHHHHHhc---------CCCCE-EEEeCCCCc
Confidence 66664322 000 00111111 11111122222211100 25896 77875222
Q ss_pred --cchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH-HHHHHHhh
Q 007212 241 --SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN-WMKAGILE 317 (612)
Q Consensus 241 --~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~k~~l~~ 317 (612)
+.++.+++.. .++|+|+++|+..+. .. ..+... .....+... +++..++.
T Consensus 108 ~~~~~a~~~~~~-------~~~~~V~~~h~~~~~-~~------~~~~~~-------------~~~~~~~~~~~e~~~~~~ 160 (415)
T cd03816 108 PTLLIAWLYCLL-------RRTKLIIDWHNYGYT-IL------ALKLGE-------------NHPLVRLAKWYEKLFGRL 160 (415)
T ss_pred hHHHHHHHHHHH-------hCCeEEEEcCCchHH-HH------hcccCC-------------CCHHHHHHHHHHHHHhhc
Confidence 2223333333 488999999975321 00 000000 000001222 33556778
Q ss_pred CCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHH----
Q 007212 318 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA---- 393 (612)
Q Consensus 318 ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~---- 393 (612)
+|.++++|+.+++.+.+ +|...+ ++.+||||. ...|.|.... .....+.+
T Consensus 161 ad~ii~vS~~~~~~l~~---~~~~~~------ki~vI~Ng~-~~~f~p~~~~----------------~~~~~~~~~~~~ 214 (415)
T cd03816 161 ADYNLCVTKAMKEDLQQ---FNNWKI------RATVLYDRP-PEQFRPLPLE----------------EKHELFLKLAKT 214 (415)
T ss_pred CCEeeecCHHHHHHHHh---hhccCC------CeeecCCCC-HHHceeCcHH----------------HHHHHHHhcccc
Confidence 99999999999999985 555444 999999994 4556654310 00111111
Q ss_pred ---------HhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--------CCeEEEEEecCChhHHHHHHHHHHHC
Q 007212 394 ---------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--------ENVQIIVLGTGKKPMEKQLEQLEILY 456 (612)
Q Consensus 394 ---------~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--------~~~~lvivG~g~~~~~~~l~~l~~~~ 456 (612)
..++.. ++..+++++||+.++||++.|++|++.+.+ ++++|+|+|+|+ .++.++++..++
T Consensus 215 ~~~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~--~~~~l~~~~~~~ 291 (415)
T cd03816 215 FLTRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP--LKEKYLERIKEL 291 (415)
T ss_pred ccccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc--cHHHHHHHHHHc
Confidence 112222 234688899999999999999999999853 479999999998 566677776665
Q ss_pred C-CceEEEec-cChHHHHHHHHhccEEEEcCC---CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccc
Q 007212 457 P-EKARGVAK-FNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD 531 (612)
Q Consensus 457 ~-~~v~~~~~-~~~~~~~~i~~~aDv~v~pS~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~ 531 (612)
+ .++.++.+ .+.++++.+|+.||+++.|+. .|++|++++|||+||+|||+++.||..|+|+++.+|+++
T Consensus 292 ~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv------ 365 (415)
T cd03816 292 KLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVF------ 365 (415)
T ss_pred CCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEE------
Confidence 4 34666654 577888899999999997543 478999999999999999999999999999999999975
Q ss_pred cccCCCCCHHHHHHHHHHHHHhh-CHHHHHHHHHHHH-HhhcCcHHHHH
Q 007212 532 CEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGM-AQDLSWKGPAK 578 (612)
Q Consensus 532 ~~~v~~~d~~~la~~i~~ll~~~-~~~~~~~~~~~~~-~~~fsw~~~a~ 578 (612)
.|+++++++|.+++++. .++.+.+|++++. ...++|+...+
T Consensus 366 ------~d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~~~~~~~~ 408 (415)
T cd03816 366 ------GDSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESELRWDENWD 408 (415)
T ss_pred ------CCHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhcCHHHHHH
Confidence 38999999999999972 1567788888874 34566655443
No 55
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=1.3e-30 Score=270.83 Aligned_cols=340 Identities=21% Similarity=0.230 Sum_probs=236.4
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+.| .||.+.++..|+++|+++||+|+++++.... ...+. ...++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~~---------------------~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PPFYE---------------------LDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CCccc---------------------cCCcccee
Confidence 79999988766 6999999999999999999999999987442 11000 11223333
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+...... . .+ ..........+.++. .+||+ +++|.+. ...
T Consensus 56 ~~~~~~~~-~--------~~-------------~~~~~~~~~~~~l~~-------------~~~d~-i~~~~~~---~~~ 96 (348)
T cd03820 56 DLGDKRDS-K--------LL-------------ARFKKLRRLRKLLKN-------------NKPDV-VISFLTS---LLT 96 (348)
T ss_pred eccccccc-c--------hh-------------ccccchHHHHHhhcc-------------cCCCE-EEEcCch---HHH
Confidence 32211100 0 00 000111122222222 25896 7777655 222
Q ss_pred HHHhhhcCCCCcCC-ceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 246 YLKTMYKPKGMYKS-AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 246 ~l~~~~~~~~~~~~-~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
++.... .+ .|++++.|+........ .......+..++.+|.++++
T Consensus 97 ~~~~~~------~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~d~ii~~ 142 (348)
T cd03820 97 FLASLG------LKIVKLIVSEHNSPDAYKKR----------------------------LRRLLLRRLLYRRADAVVVL 142 (348)
T ss_pred HHHHHh------hccccEEEecCCCccchhhh----------------------------hHHHHHHHHHHhcCCEEEEe
Confidence 222221 23 48999999643311000 00111367788999999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+..+.... ... ..++.+||||++...+.+. . ..+.+
T Consensus 143 s~~~~~~~~-----~~~------~~~~~vi~~~~~~~~~~~~------------------------------~--~~~~~ 179 (348)
T cd03820 143 TEEDRALYY-----KKF------NKNVVVIPNPLPFPPEEPS------------------------------S--DLKSK 179 (348)
T ss_pred CHHHHHHhh-----ccC------CCCeEEecCCcChhhcccc------------------------------C--CCCCc
Confidence 999973222 111 2389999999998765432 0 12457
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
.++|+|++.+.||++.++++++.+.+ ++++|+|+|.+. ....++++..+.+ .++.+.+. .+++..+++.||+
T Consensus 180 ~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~ 255 (348)
T cd03820 180 RILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP--EREALEALIKELGLEDRVILLGF--TKNIEEYYAKASI 255 (348)
T ss_pred EEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC--CHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCE
Confidence 99999999999999999999999974 789999999987 3445555555443 34555444 4667789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 559 (612)
+++||.+|++|++++|||++|+|||+++.+ +..+++.++.+|+++ ++.|+++++++|.+++++ ++.+
T Consensus 256 ~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~~i~~ll~~--~~~~ 323 (348)
T cd03820 256 FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLV----------PNGDVEALAEALLRLMED--EELR 323 (348)
T ss_pred EEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEe----------CCCCHHHHHHHHHHHHcC--HHHH
Confidence 999999999999999999999999999975 556777777799976 999999999999999998 6777
Q ss_pred HHHHHHH--HHhhcCcHHHHHHHHH
Q 007212 560 AEMMKNG--MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 560 ~~~~~~~--~~~~fsw~~~a~~~~~ 582 (612)
+++++++ +.++|+|+.++++|.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (348)
T cd03820 324 KRMGANARESAERFSIENIIKQWEE 348 (348)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHhcC
Confidence 7777776 5788999999999863
No 56
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=1.3e-30 Score=282.59 Aligned_cols=218 Identities=17% Similarity=0.136 Sum_probs=173.7
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+++..++.+|.++++|+..++.+.+. ++. . .++.+|+||+|.+.+.+...
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~--~~~-~------~~~~vi~~gvd~~~~~~~~~--------------------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL--WKR-N------TKPSIVYPPCDVEELLKLPL--------------------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH--hCc-C------CCcEEEcCCCCHHHhccccc---------------------
Confidence 45677889999999999999998862 111 1 27899999999877754321
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C-----CeEEEEEecCCh----hHHHHHHHHHHHC--
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-----NVQIIVLGTGKK----PMEKQLEQLEILY-- 456 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~-----~~~lvivG~g~~----~~~~~l~~l~~~~-- 456 (612)
...++.++|+|+||+++.||++.+++|++++.+ + +++|+|+|++.. .+.+.+++++.++
T Consensus 232 --------~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l 303 (419)
T cd03806 232 --------DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGL 303 (419)
T ss_pred --------ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Confidence 001244799999999999999999999999875 2 599999998742 3567777777665
Q ss_pred CCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCc-cccee---cCcceEEeccccccc
Q 007212 457 PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL-VDTVE---EGFTGFQMGSFSVDC 532 (612)
Q Consensus 457 ~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~-~e~v~---~g~~G~~~~~~~~~~ 532 (612)
.++|.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|||+++.||. .|++. ++.+|+++
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~------- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA------- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe-------
Confidence 35788998888888999999999999999999999999999999999999999775 57887 78999975
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHH
Q 007212 533 EAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAK 578 (612)
Q Consensus 533 ~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~ 578 (612)
.|+++++++|.++++++ ...++.+.+++ ..++|||+...+
T Consensus 377 -----~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 377 -----STAEEYAEAIEKILSLS-EEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred -----CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 49999999999999973 23333333332 568899998653
No 57
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.8e-31 Score=294.05 Aligned_cols=287 Identities=18% Similarity=0.229 Sum_probs=217.0
Q ss_pred CCCcEEEEeCCCc-ccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCC
Q 007212 227 GKKNVVFVANDWH-TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 305 (612)
Q Consensus 227 ~~pDvVi~~h~~~-~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (612)
.++|+ +|+|... .++++..++.. .++|+|++.|++....+.. .+....+. ....+..+.
T Consensus 172 ~~~dv-iH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~~e~~~--~~~~~~~~----------~~~~~~~~~ 231 (475)
T cd03813 172 PKADV-YHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYTRERKI--ELLQADWE----------MSYFRRLWI 231 (475)
T ss_pred CCCCE-EeccCcchHHHHHHHHHHH-------hCCCEEEecCCccHHHHHH--HHHhcccc----------hHHHHHHHH
Confidence 46895 9999633 33444444444 4899999999764321100 00000000 000000111
Q ss_pred chh-HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhcc
Q 007212 306 RKI-NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 306 ~~~-~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
+.+ .+.+..++.||.|+++|+..++.+.+ +|.+.+ ++.+||||+|.+.|.+....
T Consensus 232 ~~~~~l~~~~~~~ad~Ii~~s~~~~~~~~~---~g~~~~------ki~vIpNgid~~~f~~~~~~--------------- 287 (475)
T cd03813 232 RFFESLGRLAYQAADRITTLYEGNRERQIE---DGADPE------KIRVIPNGIDPERFAPARRA--------------- 287 (475)
T ss_pred HHHHHHHHHHHHhCCEEEecCHHHHHHHHH---cCCCHH------HeEEeCCCcCHHHcCCcccc---------------
Confidence 111 23466788999999999999887765 676655 89999999999888765310
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCC--hhHHHHHHHHHHHCC--C
Q 007212 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK--KPMEKQLEQLEILYP--E 458 (612)
Q Consensus 385 ~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~--~~~~~~l~~l~~~~~--~ 458 (612)
.. ..+.++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+++ +.+.+.++++..+++ +
T Consensus 288 -----------~~--~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~ 354 (475)
T cd03813 288 -----------RP--EKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLED 354 (475)
T ss_pred -----------cc--CCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCC
Confidence 01 1245899999999999999999999999875 799999999984 467778888877654 5
Q ss_pred ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec------CcceEEeccccccc
Q 007212 459 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDC 532 (612)
Q Consensus 459 ~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------g~~G~~~~~~~~~~ 532 (612)
++.+.+ .+.+..+++.+|++++||..|++|++++|||+||+|||+|+.|+..|++.+ |.+|+++
T Consensus 355 ~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv------- 424 (475)
T cd03813 355 NVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV------- 424 (475)
T ss_pred eEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE-------
Confidence 677777 344567999999999999999999999999999999999999999999998 6689976
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 533 EAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 533 ~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
++.|+++++++|.+++++ ++.+.++++++ +.+.|+|+.++++|.++|+
T Consensus 425 ---~~~d~~~la~ai~~ll~~--~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 425 ---PPADPEALARAILRLLKD--PELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ---CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999998 66677777766 5788999999999999984
No 58
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=3.7e-30 Score=268.65 Aligned_cols=352 Identities=20% Similarity=0.219 Sum_probs=245.9
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+.. .||...++..|+++|.++||+|+++++...... .....|++.+
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEE
Confidence 68999976 588899999999999999999999997633211 0112345554
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~ 245 (612)
.+....... ...+.........+.++.. +||+ +|+|.+....+..
T Consensus 52 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~-------------~~dv-v~~~~~~~~~~~~ 96 (359)
T cd03808 52 PIPLDRRGI---------------------NPFKDLKALLRLYRLLRKE-------------RPDI-VHTHTPKPGILGR 96 (359)
T ss_pred ecccccccc---------------------ChHhHHHHHHHHHHHHHhc-------------CCCE-EEEccccchhHHH
Confidence 442211000 0001111112233333332 4895 8888766666655
Q ss_pred HHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
..+... ...++++++|+..+...... . .........+..+..+|.++++|
T Consensus 97 ~~~~~~------~~~~~i~~~~~~~~~~~~~~-----------~-------------~~~~~~~~~~~~~~~~d~ii~~s 146 (359)
T cd03808 97 LAARLA------GVPKVIYTVHGLGFVFTSGG-----------L-------------KRRLYLLLERLALRFTDKVIFQN 146 (359)
T ss_pred HHHHHc------CCCCEEEEecCcchhhccch-----------h-------------HHHHHHHHHHHHHhhccEEEEcC
Confidence 555422 46788888886543211000 0 00011233466778899999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcE
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+ .+... ...++.+++||+|...+.+... . . ..+.++
T Consensus 147 ~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~--------------------~-------~--~~~~~~ 190 (359)
T cd03808 147 EDDRDLALK---LGIIK----KKKTVLIPGSGVDLDRFSPSPE--------------------P-------I--PEDDPV 190 (359)
T ss_pred HHHHHHHHH---hcCCC----cCceEEecCCCCChhhcCcccc--------------------c-------c--CCCCcE
Confidence 999999986 23211 0227788899999887765421 0 1 124589
Q ss_pred EEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHH-HCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-LYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
|+|+|++.+.||++.++++++.+.+ ++++|+|+|.+..........+.. ....++.+.+. .+++..+++.||+++
T Consensus 191 i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~i 268 (359)
T cd03808 191 FLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGF--RDDVPELLAAADVFV 268 (359)
T ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeec--cccHHHHHHhccEEE
Confidence 9999999999999999999999874 789999999987432222111111 12345766665 445668999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 562 (612)
+||..|++|++++|||++|+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++.+ ++.+.++
T Consensus 269 ~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~ 336 (359)
T cd03808 269 LPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLV----------PPGDAEALADAIERLIED--PELRARM 336 (359)
T ss_pred ecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEE----------CCCCHHHHHHHHHHHHhC--HHHHHHH
Confidence 9999999999999999999999999999999999999999987 899999999999999988 6667777
Q ss_pred HHHH---HHhhcCcHHHHHHHH
Q 007212 563 MKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 563 ~~~~---~~~~fsw~~~a~~~~ 581 (612)
++++ +.++|||+.++++|+
T Consensus 337 ~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 337 GQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHHhcCHHHHHHHhh
Confidence 6666 478999999999886
No 59
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.97 E-value=4.4e-30 Score=277.03 Aligned_cols=222 Identities=12% Similarity=0.155 Sum_probs=173.6
Q ss_pred EEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHH--hCCC
Q 007212 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE--VGLP 398 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~gl~ 398 (612)
++++|...++.+.+. ++++.+ ++.+||||+|+..|.|.... ....++. .+++
T Consensus 342 ~v~~s~~v~~~l~~~--lgip~~------KI~VIyNGVD~~rf~p~~~~------------------~~~~r~~~~~~l~ 395 (578)
T PRK15490 342 FMSNNHCVTRHYADW--LKLEAK------HFQVVYNGVLPPSTEPSSEV------------------PHKIWQQFTQKTQ 395 (578)
T ss_pred hhhccHHHHHHHHHH--hCCCHH------HEEEEeCCcchhhcCccchh------------------hHHHHHHhhhccC
Confidence 667888878877642 466655 99999999999988775321 1122222 3344
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHH
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMI 474 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i 474 (612)
. +.++|+++||+.++||.+.+++++.++.+ ++++|+|+|+|+ .++.+++++.+++ +++.+.+. .+++..+
T Consensus 396 ~--~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~elgL~d~V~FlG~--~~Dv~~~ 469 (578)
T PRK15490 396 D--ADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQLGILERILFVGA--SRDVGYW 469 (578)
T ss_pred C--CCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHHcCCCCcEEECCC--hhhHHHH
Confidence 2 34799999999999999999999988755 689999999997 5667777776654 56777665 3456689
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHH---HH
Q 007212 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR---AL 551 (612)
Q Consensus 475 ~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~---ll 551 (612)
|+.+|++|+||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++ ++.|++++++.+.. +.
T Consensus 470 LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LV----------p~~D~~aLa~ai~lA~aL~ 539 (578)
T PRK15490 470 LQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFIL----------DDAQTVNLDQACRYAEKLV 539 (578)
T ss_pred HHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEE----------CCCChhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999987 88998888887643 33
Q ss_pred HhhCHHHHHHHHHH---HHHhhcCcHHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKN---GMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 552 ~~~~~~~~~~~~~~---~~~~~fsw~~~a~~~~~~y~~ 586 (612)
+. ......++++ .+.++|||+.++++|+++|.+
T Consensus 540 ~l--l~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 540 NL--WRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HH--HHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 33 2223334444 467899999999999999974
No 60
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.97 E-value=1.5e-29 Score=273.05 Aligned_cols=440 Identities=17% Similarity=0.211 Sum_probs=259.4
Q ss_pred ccccHHHHhhchHHHHHhC-CCeEEEEEecCCccc-cccCccEEEE--E-----EeCCeeeEEEEEEeeecCceEE-EEe
Q 007212 99 KTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQYK-DAWDTDVVIE--L-----KVGDKIEKVRFFHCHKRGVDRV-FVD 168 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~~~~~~-~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~gv~~~-~v~ 168 (612)
|.||+-+++..=|+.+++. |-+..++.|...+.. ...+...... + ......-.+++-+..++|-+++ .+|
T Consensus 14 KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~G~P~viL~D 93 (590)
T cd03793 14 KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIEGYPKVVLFD 93 (590)
T ss_pred cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcCCCCeEEEEe
Confidence 6899999998888888764 888888888754211 1110000000 0 0011123456666777777666 445
Q ss_pred Ccccc-------ccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhh-ccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 169 HPWFL-------AKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 169 ~~~~~-------~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
...++ ...|-..+ +=.+..+.||.+.. -|...+...++.+... .. +++| |+|+|||++
T Consensus 94 ~~~~~~~~~~~~~~lW~~~~--i~s~~~~~d~nea~-~fgy~~~~~i~~~~~~~~~----------~~~d-ViH~HeWm~ 159 (590)
T cd03793 94 IGSAAWKLDEWKGELWELCG--IGSPEGDRETNDAI-IFGFLVAWFLGEFAEQFDD----------EPAV-VAHFHEWQA 159 (590)
T ss_pred CchhhhhHHHHHHHHHHHcC--CCCCCCCCcchHHH-HHHHHHHHHHHHHHhhccC----------CCCe-EEEEcchhH
Confidence 44333 22553222 11222334554443 2444443333333222 11 3578 599999999
Q ss_pred cchHHHHHhhhcCCCCcCCceEEEEEecCCccccc-CcccccccCCCcccccccccccCCC---CCcCCchhHHHHHHHh
Q 007212 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYN---KPVRGRKINWMKAGIL 316 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~k~~l~ 316 (612)
+....+++... .++|+|+|+|.+.. ||. +... ..+...++..++-. +.-...+...++.+..
T Consensus 160 g~a~~~lK~~~------~~VptVfTtHAT~~-GR~l~~g~-------~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~ 225 (590)
T cd03793 160 GVGLPLLRKRK------VDVSTIFTTHATLL-GRYLCAGN-------VDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAH 225 (590)
T ss_pred hHHHHHHHHhC------CCCCEEEEeccccc-ccccccCC-------cccchhhhhcchhhhhhcccchHHHHHHHHHHh
Confidence 99999999632 58899999998776 553 1110 00111111011000 0001123345778889
Q ss_pred hCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhh-hcc----HHHHHHH
Q 007212 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM-DAK----PLLKEAL 391 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~-~~~----~~~~~~l 391 (612)
.||.++|||+.++.++.. .++.+++ + |||||+|+..|.+..+. ++.. .++ ...+..+
T Consensus 226 ~Ad~fttVS~it~~E~~~--Ll~~~pd------~--ViPNGid~~~f~~~~e~--------~~~~~~~k~ki~~f~~~~~ 287 (590)
T cd03793 226 CAHVFTTVSEITAYEAEH--LLKRKPD------V--VLPNGLNVKKFSALHEF--------QNLHAQSKEKINEFVRGHF 287 (590)
T ss_pred hCCEEEECChHHHHHHHH--HhCCCCC------E--EeCCCcchhhcccchhh--------hhhhHHhhhhhhHHHHHHH
Confidence 999999999999999996 3677655 3 99999999998765321 0000 011 1112335
Q ss_pred HHHhCCCCCCCCcEEEE-EccCcc-ccCHHHHHHHHHhccc------CC---eEEEEEecC-----------C---hhHH
Q 007212 392 QAEVGLPVDRNIPVIGF-IGRLEE-QKGSDILAAAIPHFIK------EN---VQIIVLGTG-----------K---KPME 446 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~-iGrl~~-~Kg~d~li~A~~~l~~------~~---~~lvivG~g-----------~---~~~~ 446 (612)
+..++++. ++++++| +||++. +||+|.+|+|++++.. .+ +-|+|+=.+ . +.+.
T Consensus 288 ~~~~~~~~--d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~ 365 (590)
T cd03793 288 YGHYDFDL--DKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLR 365 (590)
T ss_pred hhhcCCCC--CCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHH
Confidence 66667654 3367777 799998 9999999999999854 22 223333221 0 1112
Q ss_pred HHHHHHH-------------------------------------------------------------------HHC---
Q 007212 447 KQLEQLE-------------------------------------------------------------------ILY--- 456 (612)
Q Consensus 447 ~~l~~l~-------------------------------------------------------------------~~~--- 456 (612)
+.++++. .-+
T Consensus 366 ~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~ 445 (590)
T cd03793 366 DTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPE 445 (590)
T ss_pred HHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCC
Confidence 2222210 000
Q ss_pred -CCceEEEeccC-------hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCc----ccceecC-cceE
Q 007212 457 -PEKARGVAKFN-------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTVEEG-FTGF 523 (612)
Q Consensus 457 -~~~v~~~~~~~-------~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~v~~g-~~G~ 523 (612)
..++.+++.|. +....+++++||++|+||.+||||++++|||+||+|+|+|+.+|+ .|++.++ ..|+
T Consensus 446 drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~v~~~~~~gi 525 (590)
T cd03793 446 DRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEHIEDPESYGI 525 (590)
T ss_pred CeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHHhccCCCceE
Confidence 01455555551 122446899999999999999999999999999999999999998 4555444 3566
Q ss_pred EecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH-HHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 524 QMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 524 ~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~-~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
.+-+.+. .-.+.++++++++|.++++....+.....+. +..++.|+|++.++.|.+.|+.++.
T Consensus 526 ~V~~r~~---~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 526 YIVDRRF---KSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred EEecCCc---cchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 5411000 0014668889999988885421122222222 1257889999999999999998764
No 61
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.97 E-value=2.2e-29 Score=271.47 Aligned_cols=222 Identities=16% Similarity=0.134 Sum_probs=169.7
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+++..++.+|.++++|+..++.+.+. .+... .++.+||||+|.+.|.|....
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~~~--~~~~~------~~v~vipngvd~~~f~~~~~~------------------- 216 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFRRL--APEAA------GRITAFPNGVDADFFSPDRDY------------------- 216 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHHHh--CCCCC------CCeEEeecccchhhcCCCccc-------------------
Confidence 345778889999999999999998752 12222 289999999999988764310
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHH----HHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAA----AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~----A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
...++ .+.++|+|+||+.+.||++.+++ +++.+.+ ++++|+|+|+|+. +.++++... .++.+
T Consensus 217 -----~~~~~--~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~~--~~V~~ 284 (397)
T TIGR03087 217 -----PNPYP--PGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAAL--PGVTV 284 (397)
T ss_pred -----cCCCC--CCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhccC--CCeEE
Confidence 00111 23478999999999999999884 4555543 7899999999873 235555433 34777
Q ss_pred EeccChHHHHHHHHhccEEEEcCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHH
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~ 541 (612)
.+..+ ++..+++.||++|+||+. ||+|++++|||+||+|||+|+.++ ..+..++.+|+++ + +|++
T Consensus 285 ~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~-~~i~~~~~~g~lv----------~-~~~~ 350 (397)
T TIGR03087 285 TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA-EGIDALPGAELLV----------A-ADPA 350 (397)
T ss_pred eeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccc-ccccccCCcceEe----------C-CCHH
Confidence 77665 356799999999999985 999999999999999999999754 2333344578864 5 8999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHH
Q 007212 542 AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 542 ~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~ 585 (612)
+++++|.+++++ ++.+.+|++++ +.++|||+..+++++++|.
T Consensus 351 ~la~ai~~ll~~--~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 351 DFAAAILALLAN--PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999998 66677777776 4689999999999999875
No 62
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.97 E-value=3.5e-28 Score=252.69 Aligned_cols=334 Identities=22% Similarity=0.244 Sum_probs=224.8
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+. .||.+.++..|+++|.+.||+|.+++............... . .....
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~------------~-------~~~~~ 57 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPSNV------------K-------LIPVR 57 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCccccccccch------------h-------hhcee
Confidence 7899998753 59999999999999999999999999764322211000000 0 00000
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCC-cccchH
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDW-HTSLIP 244 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~-~~~~~~ 244 (612)
..... .+ ..........+.++.. +||+ +++|.+ ...++.
T Consensus 58 ~~~~~-------------~~-------------~~~~~~~~~~~~~~~~-------------~~di-i~~~~~~~~~~~~ 97 (353)
T cd03811 58 VLKLK-------------SL-------------RDLLAILRLRRLLRKE-------------KPDV-VISHLTTTPNVLA 97 (353)
T ss_pred eeecc-------------cc-------------cchhHHHHHHHHHHhc-------------CCCE-EEEcCccchhHHH
Confidence 00000 00 0001222333334433 4896 788766 222222
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
.+.. . .+.|+++++|+......... .......+..+..+|.++++
T Consensus 98 ~~~~-~-------~~~~~i~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~d~ii~~ 142 (353)
T cd03811 98 LLAA-R-------LGTKLIVWEHNSLSLELKRK---------------------------LRLLLLIRKLYRRADKIVAV 142 (353)
T ss_pred HHHh-h-------cCCceEEEEcCcchhhhccc---------------------------hhHHHHHHhhccccceEEEe
Confidence 2222 1 26899999997654221100 00002456678899999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+.+. ++... .++.+||||+|...+.+...+ .. ..+.+ .+.+
T Consensus 143 s~~~~~~~~~~--~~~~~------~~~~vi~~~~~~~~~~~~~~~-------------------~~---~~~~~--~~~~ 190 (353)
T cd03811 143 SEGVKEDLLKL--LGIPP------DKIEVIYNPIDIEEIRALAEE-------------------PL---ELGIP--PDGP 190 (353)
T ss_pred ccchhhhHHHh--hcCCc------cccEEecCCcChhhcCcccch-------------------hh---hcCCC--CCce
Confidence 99999998862 23212 289999999998887654321 00 12222 3558
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
+|+|+||+.+.||++.++++++.+.+ ++++|+++|.++ ..+.++++..+++ +++.+.+.. +.+..+++.||+
T Consensus 191 ~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~ 266 (353)
T cd03811 191 VILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP--LREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADL 266 (353)
T ss_pred EEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc--cHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCE
Confidence 99999999999999999999999976 589999999887 3444445544433 456666553 335679999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHH---HHHHHHHHhhCHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYGTQ 557 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la---~~i~~ll~~~~~~ 557 (612)
+++||.+|++|++++|||++|+|||+++.||..|++.++.+|+++ ++.|.++++ +.+..+.++ ++
T Consensus 267 ~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~~~~~~~i~~~~~~--~~ 334 (353)
T cd03811 267 FVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLV----------PVGDEAALAAAALALLDLLLD--PE 334 (353)
T ss_pred EEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEE----------CCCCHHHHHHHHHHHHhccCC--hH
Confidence 999999999999999999999999999999999999999999987 899999994 555555544 45
Q ss_pred HHHHHHHH
Q 007212 558 ALAEMMKN 565 (612)
Q Consensus 558 ~~~~~~~~ 565 (612)
.+.+++.+
T Consensus 335 ~~~~~~~~ 342 (353)
T cd03811 335 LRERLAAA 342 (353)
T ss_pred HHHHHHHH
Confidence 56666653
No 63
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=3.1e-28 Score=257.80 Aligned_cols=205 Identities=20% Similarity=0.253 Sum_probs=170.8
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+.+..++.+|.++++|+..++.+.+. ++ .+..+|+||+|.+.|.+..
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~~~~~--~~---------~~~~vi~~~~d~~~~~~~~---------------------- 192 (351)
T cd03804 146 WDRRSAARVDYFIANSRFVARRIKKY--YG---------RDATVIYPPVDTDRFTPAE---------------------- 192 (351)
T ss_pred HHHHHhcCCCEEEECCHHHHHHHHHH--hC---------CCcEEECCCCCHhhcCcCC----------------------
Confidence 44666789999999999999999752 22 1567899999988876542
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChH
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP 469 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 469 (612)
...+.++|+||+.+.||++.+++|+.++ + ++|+|+|+|+ ..+.+++ ...+++.+.+..+.+
T Consensus 193 -----------~~~~~il~~G~~~~~K~~~~li~a~~~~--~-~~l~ivG~g~--~~~~l~~---~~~~~V~~~g~~~~~ 253 (351)
T cd03804 193 -----------EKEDYYLSVGRLVPYKRIDLAIEAFNKL--G-KRLVVIGDGP--ELDRLRA---KAGPNVTFLGRVSDE 253 (351)
T ss_pred -----------CCCCEEEEEEcCccccChHHHHHHHHHC--C-CcEEEEECCh--hHHHHHh---hcCCCEEEecCCCHH
Confidence 1235799999999999999999999998 2 8999999987 3444444 345679999999999
Q ss_pred HHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 470 ~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
++..+++.||++++||. |+||++++|||+||+|||+++.||..|++.++.+|+++ ++.|+++++++|.+
T Consensus 254 ~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~----------~~~~~~~la~~i~~ 322 (351)
T cd03804 254 ELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF----------EEQTVESLAAAVER 322 (351)
T ss_pred HHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe----------CCCCHHHHHHHHHH
Confidence 89999999999999999 99999999999999999999999999999999999976 99999999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHhhcCcHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNGMAQDLSWKGPAKKW 580 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~ 580 (612)
+++++. ...+++.++ .+.|+|++..+++
T Consensus 323 l~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 350 (351)
T cd03804 323 FEKNED-FDPQAIRAH--AERFSESRFREKI 350 (351)
T ss_pred HHhCcc-cCHHHHHHH--HHhcCHHHHHHHh
Confidence 999842 333444443 3679999998875
No 64
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=2e-28 Score=266.41 Aligned_cols=208 Identities=16% Similarity=0.124 Sum_probs=160.0
Q ss_pred CCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCC
Q 007212 318 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 318 ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl 397 (612)
||.|+++|.... .+.. . .|. ..||||++.|.|... ...++++|+
T Consensus 499 cD~VIaPS~atq-~L~~---~-----------vI~-nVnGVDte~F~P~~r--------------------~~~~r~lgi 542 (794)
T PLN02501 499 CHKVLRLSAATQ-DLPK---S-----------VIC-NVHGVNPKFLKIGEK--------------------VAEERELGQ 542 (794)
T ss_pred CCEEEcCCHHHH-Hhcc---c-----------cee-ecccccccccCCcch--------------------hHHHHhcCC
Confidence 899999997766 3321 1 222 237999999988742 122255666
Q ss_pred CCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007212 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 398 ~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 475 (612)
+... ..++|+|||.++||++.|++|++.+.+ ++++|+|+|+|+ .++.+++++.+++..+.+.+..+ ....+|
T Consensus 543 ~~~~--kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP--~reeLe~la~eLgL~V~FLG~~d--d~~~ly 616 (794)
T PLN02501 543 QAFS--KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE--DAHEVQRAAKRLDLNLNFLKGRD--HADDSL 616 (794)
T ss_pred cccc--CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc--cHHHHHHHHHHcCCEEEecCCCC--CHHHHH
Confidence 5433 458999999999999999999998865 589999999998 56677777776664455554432 233689
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
+.+|+||+||..|+||++++||||||+|||+++.+|. +++.++.+|++ ..|+++++++|.++++++
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll------------~~D~EafAeAI~~LLsd~- 682 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLT------------YKTSEDFVAKVKEALANE- 682 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEe------------cCCHHHHHHHHHHHHhCc-
Confidence 9999999999999999999999999999999999985 55777888884 389999999999999983
Q ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 556 TQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 556 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+....+.. ...|||+..++++++.-+
T Consensus 683 -~~rl~~~a---~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 683 -PQPLTPEQ---RYNLSWEAATQRFMEYSD 708 (794)
T ss_pred -hhhhHHHH---HhhCCHHHHHHHHHHhhc
Confidence 32222222 458999999999998654
No 65
>PHA01633 putative glycosyl transferase group 1
Probab=99.96 E-value=1.8e-27 Score=246.81 Aligned_cols=225 Identities=16% Similarity=0.225 Sum_probs=170.7
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
++..+.+.+.+.++++|+..++.+.+ .|++. .+ +|+||+|.+.|.|.... .
T Consensus 84 ~~y~~~m~~~~~vIavS~~t~~~L~~---~G~~~-------~i-~I~~GVD~~~f~p~~~~------------------~ 134 (335)
T PHA01633 84 EIVNKYLLQDVKFIPNSKFSAENLQE---VGLQV-------DL-PVFHGINFKIVENAEKL------------------V 134 (335)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHH---hCCCC-------ce-eeeCCCChhhcCccchh------------------h
Confidence 34556677788999999999999986 56542 23 47899999988775321 2
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
..++++++.... +.++|+++||+.++||++.+++|++.+.+ + +++++++|.+ .++++ ..++++.+
T Consensus 135 ~~~r~~~~~~~~-~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l--~l~~~V~f 205 (335)
T PHA01633 135 PQLKQKLDKDFP-DTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQL--EVPANVHF 205 (335)
T ss_pred HHHHHHhCcCCC-CCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHc--CCCCcEEE
Confidence 445666664322 44799999999999999999999999865 3 4688888742 23333 24556877
Q ss_pred Eecc---ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec------------------Ccc
Q 007212 463 VAKF---NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------------------GFT 521 (612)
Q Consensus 463 ~~~~---~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------------------g~~ 521 (612)
.+.+ +.+++..+|++||++|+||.+|+||++++|||+||+|||+++.+|+.|++.+ ..+
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~ 285 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQ 285 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCc
Confidence 7533 5677889999999999999999999999999999999999999999997542 223
Q ss_pred eEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHH
Q 007212 522 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 582 (612)
Q Consensus 522 G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~ 582 (612)
||.+ +..|+++|+++|.++++...++.+ .+.....++.|+|+.+.++|++
T Consensus 286 g~~~----------~~~d~~~la~ai~~~~~~~~~~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 286 KWKI----------HKFQIEDMANAIILAFELQDREER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeee----------cCCCHHHHHHHHHHHHhccChhhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 5544 889999999999999776433333 2223346899999999999974
No 66
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.96 E-value=3.3e-28 Score=267.54 Aligned_cols=224 Identities=17% Similarity=0.115 Sum_probs=174.3
Q ss_pred HHhhCCEEEecCHHHHHHHHcCc-CCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGE-DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~-~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
....+|.++++|+..++.+.+.. .++... .++.+||||++...+.|..
T Consensus 267 ~~~~~D~iI~~S~~~~~~l~~~~~~~~~~~------~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 267 NADYIDFFITATDIQNQILKNQFKKYYNIE------PRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred chhhCCEEEECCHHHHHHHHHHhhhhcCCC------CcEEEEcCCCcccccCccc-------------------------
Confidence 35678999999999888877521 122211 2899999998754433321
Q ss_pred HHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccCh
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI 468 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~ 468 (612)
.++...|+|+||+.+.||++.+++|+..+.+ ++++|+|+|.|+ ..+.++++..+++ +.+.+.+..
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~--~~~~l~~~i~~~~l~~~V~f~G~~-- 384 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG--EKQKLQKIINENQAQDYIHLKGHR-- 384 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch--hHHHHHHHHHHcCCCCeEEEcCCC--
Confidence 1234689999999999999999999999865 799999999998 4567777776653 456666632
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCcceEEecc-cccccccCCCCC-HHHHHH
Q 007212 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGS-FSVDCEAVDPVD-VAAVST 545 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~-~~~~~~~v~~~d-~~~la~ 545 (612)
.+..+++.||++|+||..|+||++++|||+||+|||+++.+ |.+|+|.+|.+|+++.. +..+ ++.| +++|++
T Consensus 385 -~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~----d~~~~~~~la~ 459 (500)
T TIGR02918 385 -NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEED----DEDQIITALAE 459 (500)
T ss_pred -CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcccc----chhHHHHHHHH
Confidence 34578999999999999999999999999999999999986 89999999999998720 0000 1223 899999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l 587 (612)
+|.++++ ++.+.+|++++ .+++|||+.++++|+++++++
T Consensus 460 ~I~~ll~---~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 460 KIVEYFN---SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHhC---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999994 34577787777 468999999999999998764
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.96 E-value=3.9e-28 Score=254.18 Aligned_cols=231 Identities=14% Similarity=0.147 Sum_probs=172.7
Q ss_pred HHHHHH-HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHH
Q 007212 309 NWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 309 ~~~k~~-l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
.++... .+.+|.++++|+..++.+.+ .|... ..++.+||||+|.+.|.|....
T Consensus 85 ~~~~~~~~~~ad~ii~~S~~~~~~l~~---~g~~~-----~~~i~vIpNGVd~~~f~~~~~~------------------ 138 (331)
T PHA01630 85 TALYFFRNQPVDEIVVPSQWSKNAFYT---SGLKI-----PQPIYVIPHNLNPRMFEYKPKE------------------ 138 (331)
T ss_pred HHHHHHhhccCCEEEECCHHHHHHHHH---cCCCC-----CCCEEEECCCCCHHHcCCCccc------------------
Confidence 345555 67899999999999999976 44331 1289999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEec
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 465 (612)
..+.+++++.|++.++||++.|++|++.+.+ ++++++|+|++..+ ..+. ...+ ..+.
T Consensus 139 ------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~--~~l~----~~~~---~~~~ 197 (331)
T PHA01630 139 ------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD--PRLF----GLNG---VKTP 197 (331)
T ss_pred ------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc--hhhc----cccc---eecc
Confidence 1133677888899999999999999999975 68999999976522 1111 1111 1233
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccc---------cccccCC
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFS---------VDCEAVD 536 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~---------~~~~~v~ 536 (612)
.+.+++..+|+.||++++||++|+||++++||||||+|||+|+.||+.|++.++.+|+++.... .+|=.+-
T Consensus 198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccccc
Confidence 4667888999999999999999999999999999999999999999999999999998763110 0111122
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHH-HHHH--HHhhcCcHHHHHHHHHHHHH
Q 007212 537 PVDVAAVSTTVRRALATYGTQALAEM-MKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 537 ~~d~~~la~~i~~ll~~~~~~~~~~~-~~~~--~~~~fsw~~~a~~~~~~y~~ 586 (612)
+.|.+++++.+.+++.+++++.+.++ ..++ ..++|||+.++++|+++|++
T Consensus 278 ~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 278 DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 34788899999999987433333433 3333 57999999999999999974
No 68
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.96 E-value=2.5e-27 Score=256.15 Aligned_cols=220 Identities=14% Similarity=0.130 Sum_probs=180.9
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+.+..++.+|.++++|+..++.+.+. ++...+ ++.+++||+|...+.+..
T Consensus 175 ~~~~~~~~~~d~ii~~S~~~~~~l~~~--~~~~~~------ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 175 PLRRYLLSSLDAVFPCSEQGRNYLQKR--YPAYKE------KIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHH--CCCccc------cEEEEECCcccccccCCC---------------------
Confidence 344556889999999999999998853 444433 889999999987654321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C--CeEEEEEecCChhHHHHHHHHHHHC--CCceEE
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGTGKKPMEKQLEQLEILY--PEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~--~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~ 462 (612)
..++.+.|+++||+.+.||++.+++|+.++.+ + +++++++|+|+ ..+.+++++... .+++.+
T Consensus 226 ----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V~f 293 (407)
T cd04946 226 ----------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISVNF 293 (407)
T ss_pred ----------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceEEE
Confidence 11245799999999999999999999999976 2 57788899987 556677776543 346888
Q ss_pred EeccChHHHHHHHHh--ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCC-CC
Q 007212 463 VAKFNIPLAHMIIAG--ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP-VD 539 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~--aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~-~d 539 (612)
.+..+.+++..+++. +|+++.||..|++|++++|||++|+|||+|+.||..|++.++.+|+++ ++ .|
T Consensus 294 ~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~----------~~~~~ 363 (407)
T cd04946 294 TGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL----------SKDPT 363 (407)
T ss_pred ecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe----------CCCCC
Confidence 888888888788864 789999999999999999999999999999999999999999999986 55 58
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHH
Q 007212 540 VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 540 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~ 581 (612)
+++++++|.+++++ ++.+.+|++++ +.++|||+...++|.
T Consensus 364 ~~~la~~I~~ll~~--~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 364 PNELVSSLSKFIDN--EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999999997 66777777777 579999999998875
No 69
>PLN02275 transferase, transferring glycosyl groups
Probab=99.95 E-value=2.3e-26 Score=245.75 Aligned_cols=190 Identities=12% Similarity=0.065 Sum_probs=149.3
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+++..++.+|.++++|+.+++.+.+. +|+ ++.+|+||. .+.|.|....
T Consensus 158 ~e~~~~~~ad~ii~~S~~~~~~l~~~--~g~---------~i~vi~n~~-~~~f~~~~~~-------------------- 205 (371)
T PLN02275 158 YERHYGKMADGHLCVTKAMQHELDQN--WGI---------RATVLYDQP-PEFFRPASLE-------------------- 205 (371)
T ss_pred HHHHHHhhCCEEEECCHHHHHHHHHh--cCC---------CeEEECCCC-HHHcCcCCch--------------------
Confidence 34667888999999999999998751 232 378999984 4666554210
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcc-------------------cCCeEEEEEecCChhHHHHHH
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-------------------KENVQIIVLGTGKKPMEKQLE 450 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~-------------------~~~~~lvivG~g~~~~~~~l~ 450 (612)
. .+.. +...+++++||+.++||++.+++|+..+. .++++|+|+|+|+ ..+.++
T Consensus 206 ---~--~~~~-~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~--~~~~l~ 277 (371)
T PLN02275 206 ---I--RLRP-NRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP--QKAMYE 277 (371)
T ss_pred ---h--cccC-CCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC--CHHHHH
Confidence 0 0111 12357889999999999999999998872 2689999999998 556676
Q ss_pred HHHHHCC-CceEEEec-cChHHHHHHHHhccEEEEcCC---CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEe
Q 007212 451 QLEILYP-EKARGVAK-FNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 525 (612)
Q Consensus 451 ~l~~~~~-~~v~~~~~-~~~~~~~~i~~~aDv~v~pS~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~ 525 (612)
++..+.+ .++.+++. .+.++++.+|+.||++++|+. .|++|++++||||||+|||+++.||..|+|.++.+|+++
T Consensus 278 ~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv 357 (371)
T PLN02275 278 EKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLF 357 (371)
T ss_pred HHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEE
Confidence 7666554 34777665 577888899999999998642 388999999999999999999999999999999999986
Q ss_pred cccccccccCCCCCHHHHHHHHHHHH
Q 007212 526 GSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 526 ~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
+ |+++|+++|.+++
T Consensus 358 ----------~--~~~~la~~i~~l~ 371 (371)
T PLN02275 358 ----------S--SSSELADQLLELL 371 (371)
T ss_pred ----------C--CHHHHHHHHHHhC
Confidence 4 6999999998764
No 70
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.94 E-value=6.4e-26 Score=241.92 Aligned_cols=215 Identities=20% Similarity=0.210 Sum_probs=174.4
Q ss_pred HHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHH
Q 007212 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 311 ~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (612)
+...+..+|.++++|+..++.+.+. ++.. .++.+||||++...+.+...
T Consensus 151 ~~~~~~~~d~ii~~s~~~~~~l~~~--~~~~-------~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 151 VFENLDKVDGVIVATEQQKQDLQKQ--FGNY-------NPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred HHhChhhCCEEEEccHHHHHHHHHH--hCCC-------CceEEEcccccChhhcccch----------------------
Confidence 3344678999999999999998852 2211 15899999999877654310
Q ss_pred HHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEecc
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKF 466 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~ 466 (612)
..++...|+++||+.+.||++.+++|+.++.+ ++++|+|+|.|. ....++++.... ++.+.+.+ +
T Consensus 200 --------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g-~ 268 (372)
T cd04949 200 --------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGD--EEEKLKELIEELGLEDYVFLKG-Y 268 (372)
T ss_pred --------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCc--hHHHHHHHHHHcCCcceEEEcC-C
Confidence 01234689999999999999999999999965 789999999987 344455555443 34566555 4
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCcceEEecccccccccCCCCCHHHHHH
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~ 545 (612)
.+.+..+++.||++|+||..|+||++++|||++|+|||+++.+ |..+++.++.+|+++ ++.|+++|++
T Consensus 269 -~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv----------~~~d~~~la~ 337 (372)
T cd04949 269 -TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLV----------PKGDIEALAE 337 (372)
T ss_pred -CCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEe----------CCCcHHHHHH
Confidence 3446689999999999999999999999999999999999987 899999999999976 8999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 580 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~ 580 (612)
+|.+++++ ++.+.++++++. .++|||+.++++|
T Consensus 338 ~i~~ll~~--~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELLND--PKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHcC--HHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999998 677888888774 6899999999876
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=2.6e-25 Score=243.42 Aligned_cols=291 Identities=17% Similarity=0.201 Sum_probs=203.8
Q ss_pred CcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh
Q 007212 229 KNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 308 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (612)
.| +|++||+|..++|.+++... .+.|++|.+|-..+.. ..+..+ | ..
T Consensus 132 ~d-~iwihDyhl~llp~~lr~~~------~~~~i~~f~HipfP~~----e~~~~l--p--------------------~~ 178 (460)
T cd03788 132 GD-LVWVHDYHLLLLPQMLRERG------PDARIGFFLHIPFPSS----EIFRCL--P--------------------WR 178 (460)
T ss_pred CC-EEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCCCCCh----HHHhhC--C--------------------Ch
Confidence 47 59999999999999998753 5789999999433211 001111 0 11
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccch--h----hhhccCeEEeeCCccCCCcCCCcccccccccCcchh
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--N----IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 380 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~~--~----~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~ 380 (612)
..+-..+..+|.|.+.+..+.+.+.+... .+.+.. . .-+..++.+||||+|++.|.+....
T Consensus 179 ~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~~----------- 247 (460)
T cd03788 179 EELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAAS----------- 247 (460)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhcC-----------
Confidence 23345667799999999887766554210 111100 0 0012378999999999888654211
Q ss_pred hhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CC----eEEEEEecCC-------hhHHH
Q 007212 381 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTGK-------KPMEK 447 (612)
Q Consensus 381 ~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~----~~lvivG~g~-------~~~~~ 447 (612)
+..++.+++..+... +.++|+++||+++.||++.+++|++.+.+ ++ ++|+++|.+. ..+++
T Consensus 248 ----~~~~~~~~~~~~~~~--~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~~ 321 (460)
T cd03788 248 ----PEVQERAAELRERLG--GRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELRR 321 (460)
T ss_pred ----chhHHHHHHHHHhcC--CCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHHH
Confidence 111222333334432 45899999999999999999999998865 33 6788887532 24556
Q ss_pred HHHHHHHHCC--------CceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----eEEcCCCCccc
Q 007212 448 QLEQLEILYP--------EKARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVD 514 (612)
Q Consensus 448 ~l~~l~~~~~--------~~v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e 514 (612)
++++++.+.+ ..+.++. ..+.+++..+|+.||++++||..|+||++++|||+||+| +|+|+.+|..+
T Consensus 322 ~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~ 401 (460)
T cd03788 322 EVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAE 401 (460)
T ss_pred HHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchh
Confidence 6666644321 1244444 347888889999999999999999999999999999999 99999888887
Q ss_pred ceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHH
Q 007212 515 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEET 583 (612)
Q Consensus 515 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~ 583 (612)
. +.+|+++ +|.|+++++++|.++++++ .+.+.++.+++ ...+|||+..++++++-
T Consensus 402 ~---~~~g~lv----------~p~d~~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 402 E---LSGALLV----------NPYDIDEVADAIHRALTMP-LEERRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred h---cCCCEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 7 4678876 9999999999999999974 34445555444 35789999999998764
No 72
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.93 E-value=8.8e-25 Score=237.61 Aligned_cols=291 Identities=17% Similarity=0.194 Sum_probs=204.8
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|.+||+|..++|.+++... .+.++.|.+|-..+. .+.+..+ | ...
T Consensus 129 d-~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHipfP~----~e~f~~l--p--------------------~r~ 175 (456)
T TIGR02400 129 D-IVWVHDYHLMLLPAMLRELG------VQNKIGFFLHIPFPS----SEIYRTL--P--------------------WRR 175 (456)
T ss_pred C-EEEEecchhhHHHHHHHhhC------CCCeEEEEEeCCCCC----hHHHhhC--C--------------------cHH
Confidence 6 59999999999999999874 578999999943221 1111111 1 123
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccchh--h---hhccCeEEeeCCccCCCcCCCcccccccccCcchhhh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN--I---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 382 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~~~--~---~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~ 382 (612)
.+-.++..+|.|-+.+..+++.+.+... .|.+... + -+..+|.++|||+|++.|.+.... .
T Consensus 176 ~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~------------~ 243 (456)
T TIGR02400 176 ELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK------------P 243 (456)
T ss_pred HHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC------------h
Confidence 3556788999999999999988775321 1221100 0 133489999999999988664321 0
Q ss_pred ccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEEEEEec-----CC--hhHHHHH
Q 007212 383 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGT-----GK--KPMEKQL 449 (612)
Q Consensus 383 ~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~lvivG~-----g~--~~~~~~l 449 (612)
........++++++ ++++|+++||+++.||++.+++|++.+.+ + ++.|+++|. ++ ..+++++
T Consensus 244 ~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i 318 (456)
T TIGR02400 244 SVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQV 318 (456)
T ss_pred hHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHH
Confidence 00011223555552 45799999999999999999999999864 3 366887753 22 2345566
Q ss_pred HHHHHHCCC--------ceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----eEEcCCCCcccce
Q 007212 450 EQLEILYPE--------KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVDTV 516 (612)
Q Consensus 450 ~~l~~~~~~--------~v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~v 516 (612)
++++...++ .+.++. .++.+++..+|+.||++++||..||||++++||||||+| +|+|+.+|..+.+
T Consensus 319 ~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l 398 (456)
T TIGR02400 319 EELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQEL 398 (456)
T ss_pred HHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHh
Confidence 665332111 133333 446788889999999999999999999999999999999 9999998888877
Q ss_pred ecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHH
Q 007212 517 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 517 ~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y 584 (612)
. +|+++ +|.|+++++++|.++++++. +.+.++.++. ....||+...++++++-+
T Consensus 399 ~---~gllV----------nP~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 399 N---GALLV----------NPYDIDGMADAIARALTMPL-EEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred C---CcEEE----------CCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 4 68865 99999999999999999742 3333333322 356699999999988654
No 73
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.93 E-value=1.1e-23 Score=223.79 Aligned_cols=342 Identities=16% Similarity=0.029 Sum_probs=223.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++.. .||...+..+|+++|.++||+|++++.......+ .....|+++
T Consensus 2 ~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~----------------------~~~~~g~~~ 53 (357)
T PRK00726 2 KKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEAR----------------------LVPKAGIEF 53 (357)
T ss_pred cEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh----------------------ccccCCCcE
Confidence 999999864 5888888889999999999999999975311000 001136777
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+.++.+..... . ..........+......+.+.+.. .+||+ +|+|.|..++.+
T Consensus 54 ~~~~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~~~~~ik~----------~~pDv-v~~~~~~~~~~~ 106 (357)
T PRK00726 54 HFIPSGGLRRK-------G---------SLANLKAPFKLLKGVLQARKILKR----------FKPDV-VVGFGGYVSGPG 106 (357)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh----------cCCCE-EEECCCcchhHH
Confidence 77754321110 0 001111111222223333222221 14895 999988776665
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
....+. .++|++++.|+..+ . ...+..+..+|.+++.
T Consensus 107 ~~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~r~~~~~~d~ii~~ 143 (357)
T PRK00726 107 GLAARL-------LGIPLVIHEQNAVP----------------------------------G--LANKLLARFAKKVATA 143 (357)
T ss_pred HHHHHH-------cCCCEEEEcCCCCc----------------------------------c--HHHHHHHHHhchheEC
Confidence 544433 48899987664211 0 1123456789999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
++..... .+. .++.+|+||+|.+.+.+.. .+++++++. +.+
T Consensus 144 ~~~~~~~--------~~~------~~i~vi~n~v~~~~~~~~~-----------------------~~~~~~~~~--~~~ 184 (357)
T PRK00726 144 FPGAFPE--------FFK------PKAVVTGNPVREEILALAA-----------------------PPARLAGRE--GKP 184 (357)
T ss_pred chhhhhc--------cCC------CCEEEECCCCChHhhcccc-----------------------hhhhccCCC--CCe
Confidence 8844211 122 2999999999987664321 112345543 447
Q ss_pred EEEEEccCccccCHHHHH-HHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 405 VIGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li-~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
+|+++|+....|+...++ +|++++.+....++++|.|. .++..+.+ . .+.++.+.+. . +....+++.||+++.
T Consensus 185 ~i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~v~~~g~-~-~~~~~~~~~~d~~i~ 258 (357)
T PRK00726 185 TLLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAY-A-AGINAEVVPF-I-DDMAAAYAAADLVIC 258 (357)
T ss_pred EEEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCcEEEeeh-H-hhHHHHHHhCCEEEE
Confidence 889999998888876555 99988855335577889887 34443343 3 4433444433 3 456689999999998
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCcceEEecccccccccCCCCC--HHHHHHHHHHHHHh
Q 007212 484 PSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~i~~ll~~ 553 (612)
++- +.+++|||++|+|+|++..++ ..+.+.+..+|+++ ++.| +++|+++|++++++
T Consensus 259 ~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~----------~~~~~~~~~l~~~i~~ll~~ 324 (357)
T PRK00726 259 RAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLI----------PQSDLTPEKLAEKLLELLSD 324 (357)
T ss_pred CCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEE----------EcccCCHHHHHHHHHHHHcC
Confidence 763 689999999999999987643 23556677789976 6666 99999999999998
Q ss_pred hCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHH
Q 007212 554 YGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 554 ~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~ 585 (612)
++.+++|++++. .+.++-+.+++.|+++..
T Consensus 325 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 325 --PERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred --HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 777788888773 577888888888877654
No 74
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.92 E-value=1.7e-22 Score=213.47 Aligned_cols=321 Identities=14% Similarity=0.072 Sum_probs=200.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||+|++.+ .||-......|+++|.++||+|++++.......+ + ....|+++
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~--------------------~--~~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKR--------------------L--VPKAGIEF 52 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhc--------------------c--cccCCCce
Confidence 799988865 3555555569999999999999999864221000 0 01136666
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+.++...+... . .......+..+.....+..+.+.. .+||+ +|+|.+......
T Consensus 53 ~~i~~~~~~~~-------~---------~~~~l~~~~~~~~~~~~l~~~i~~----------~~pDv-Vi~~~~~~~~~~ 105 (348)
T TIGR01133 53 YFIPVGGLRRK-------G---------SFRLIKTPLKLLKAVFQARRILKK----------FKPDA-VIGFGGYVSGPA 105 (348)
T ss_pred EEEeccCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHh----------cCCCE-EEEcCCcccHHH
Confidence 66643221110 0 111111111112222222222221 25895 888866555544
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEec
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~v 324 (612)
..+... .++|++++.|+..+ . ...+...+.+|.++++
T Consensus 106 ~~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~d~ii~~ 142 (348)
T TIGR01133 106 GLAAKL-------LGIPLFHHEQNAVP----------------------------------G--LTNKLLSRFAKKVLIS 142 (348)
T ss_pred HHHHHH-------cCCCEEEECCCCCc----------------------------------c--HHHHHHHHHhCeeEEC
Confidence 444433 36788744332110 0 1123456789999999
Q ss_pred CHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCc
Q 007212 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~ 404 (612)
|+...+.+ +..+|+||+|...+.+... +++++++. +.+
T Consensus 143 ~~~~~~~~-----------------~~~~i~n~v~~~~~~~~~~-----------------------~~~~~~~~--~~~ 180 (348)
T TIGR01133 143 FPGAKDHF-----------------EAVLVGNPVRQEIRSLPVP-----------------------RERFGLRE--GKP 180 (348)
T ss_pred chhHhhcC-----------------CceEEcCCcCHHHhcccch-----------------------hhhcCCCC--CCe
Confidence 99876653 2378999999765543210 22456663 447
Q ss_pred EEEEEccCccccCHHH-HHHHHHhcccCCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 405 VIGFIGRLEEQKGSDI-LAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~-li~A~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
+|+++|+....|++.. +++|++.+.+.+++++++ |+++ . +.+++...+++ +.....|.......+|+.||++|
T Consensus 181 ~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~-~~l~~~~~~~~--l~~~v~~~~~~~~~~l~~ad~~v 255 (348)
T TIGR01133 181 TILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND--L-EKVKNVYQELG--IEAIVTFIDENMAAAYAAADLVI 255 (348)
T ss_pred EEEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch--H-HHHHHHHhhCC--ceEEecCcccCHHHHHHhCCEEE
Confidence 8999999888888654 568888886656676544 4443 2 45666555544 22223333325668999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCC-------cccceecCcceEEecccccccccCCCCC--HHHHHHHHHHHHHh
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGG-------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALAT 553 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg-------~~e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~i~~ll~~ 553 (612)
.++ + |++++|||++|+|+|+++.++ ..+++.++.+|+++ ++.| +++++++|.+++++
T Consensus 256 ~~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~----------~~~~~~~~~l~~~i~~ll~~ 321 (348)
T TIGR01133 256 SRA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVI----------RQKELLPEKLLEALLKLLLD 321 (348)
T ss_pred ECC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEE----------ecccCCHHHHHHHHHHHHcC
Confidence 865 2 789999999999999988644 23577788899976 7765 99999999999987
Q ss_pred hCHHHHHHHHHHH
Q 007212 554 YGTQALAEMMKNG 566 (612)
Q Consensus 554 ~~~~~~~~~~~~~ 566 (612)
++.+.+|++++
T Consensus 322 --~~~~~~~~~~~ 332 (348)
T TIGR01133 322 --PANLEAMAEAA 332 (348)
T ss_pred --HHHHHHHHHHH
Confidence 77778888776
No 75
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.92 E-value=2.5e-22 Score=212.38 Aligned_cols=321 Identities=14% Similarity=0.052 Sum_probs=207.1
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
+|++.+.+ +||...++..|+++|.++||+|++++.......+ .....|++++
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~----------------------~~~~~~~~~~ 52 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR----------------------LVPKAGIPLH 52 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh----------------------cccccCCceE
Confidence 46666654 6888888999999999999999999976321111 0012356666
Q ss_pred EEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHH---HHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 166 FVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQ---AALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 166 ~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
.+..+.+..+ . .......+..+.+ .+.+.++.. +||+ ||+|.+...+
T Consensus 53 ~~~~~~~~~~-------~---------~~~~~~~~~~~~~~~~~~~~~i~~~-------------~pDv-I~~~~~~~~~ 102 (350)
T cd03785 53 TIPVGGLRRK-------G---------SLKKLKAPFKLLKGVLQARKILKKF-------------KPDV-VVGFGGYVSG 102 (350)
T ss_pred EEEecCcCCC-------C---------hHHHHHHHHHHHHHHHHHHHHHHhc-------------CCCE-EEECCCCcch
Confidence 6643322110 0 0011111111122 233333332 5896 7888655544
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
......+. .++|+++..|+... . .+.+.....+|.++
T Consensus 103 ~~~~~a~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~~~vi 139 (350)
T cd03785 103 PVGLAAKL-------LGIPLVIHEQNAVP----------------------------------G--LANRLLARFADRVA 139 (350)
T ss_pred HHHHHHHH-------hCCCEEEEcCCCCc----------------------------------c--HHHHHHHHhhCEEE
Confidence 33333333 47888876553110 0 11233456799999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
++|+...+.+. ..++.+|+||+|.+.+.+.. . +++++++. +
T Consensus 140 ~~s~~~~~~~~--------------~~~~~~i~n~v~~~~~~~~~----------------------~-~~~~~~~~--~ 180 (350)
T cd03785 140 LSFPETAKYFP--------------KDKAVVTGNPVREEILALDR----------------------E-RARLGLRP--G 180 (350)
T ss_pred EcchhhhhcCC--------------CCcEEEECCCCchHHhhhhh----------------------h-HHhcCCCC--C
Confidence 99998776511 12899999999987664321 1 56667764 3
Q ss_pred CcEEEEEccCccccCHH-HHHHHHHhcccCCeEE-EEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRLEEQKGSD-ILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d-~li~A~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
.++|+++|+....|+.+ .+++|++.+.++++++ +++|+|. . +.+++...++.+++.+.+.. +....+|+.||+
T Consensus 181 ~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~--~-~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~ 255 (350)
T cd03785 181 KPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD--L-EEVKKAYEELGVNYEVFPFI--DDMAAAYAAADL 255 (350)
T ss_pred CeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc--H-HHHHHHHhccCCCeEEeehh--hhHHHHHHhcCE
Confidence 47888888877777765 4568888886666764 4678773 2 34444444444567766654 556689999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRA 550 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~l 550 (612)
+|.++. +++++|||++|+|+|+++.++ ..+.+.+..+|+++ ++. |+++++++|.++
T Consensus 256 ~v~~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v----------~~~~~~~~~l~~~i~~l 321 (350)
T cd03785 256 VISRAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLI----------PQEELTPERLAAALLEL 321 (350)
T ss_pred EEECCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEE----------ecCCCCHHHHHHHHHHH
Confidence 998763 689999999999999987654 24566667789976 665 899999999999
Q ss_pred HHhhCHHHHHHHHHHHH
Q 007212 551 LATYGTQALAEMMKNGM 567 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~~ 567 (612)
+++ ++.+++|++++.
T Consensus 322 l~~--~~~~~~~~~~~~ 336 (350)
T cd03785 322 LSD--PERLKAMAEAAR 336 (350)
T ss_pred hcC--HHHHHHHHHHHH
Confidence 987 677788888763
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.91 E-value=2.3e-22 Score=215.53 Aligned_cols=221 Identities=13% Similarity=0.094 Sum_probs=161.3
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (612)
.+++|.++++|+..++.+.+ +|++.+ ++.++.|.++.. |.+..+ +..++++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~---~gi~~~------ki~v~G~p~~~~-f~~~~~-------------------~~~~~~~ 195 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD---IGVPPE------QVVETGIPIRSS-FELKIN-------------------PDIIYNK 195 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh------HEEEECcccChH-HcCcCC-------------------HHHHHHH
Confidence 56899999999999999987 677655 777776655432 222111 3456788
Q ss_pred hCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHH
Q 007212 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 474 (612)
Q Consensus 395 ~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 474 (612)
++++.+. ..++++.|++...|+++.+++++.+. ++++++++|.+...+.+.++++....++++.+.+..+ ....+
T Consensus 196 ~~l~~~~-~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~--~~~~l 270 (380)
T PRK13609 196 YQLCPNK-KILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVE--NIDEL 270 (380)
T ss_pred cCCCCCC-cEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechh--hHHHH
Confidence 8987542 34566678898899999999998754 6899988764444466777777666665677775542 35679
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC-CCCcc----cceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 475 ~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
++.||+++. ++.|++++|||++|+|+|+++ .+|.. +.+.+ +|+.+ ...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~----------~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAV----------VIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEE----------EECCHHHHHHHHHH
Confidence 999999884 566999999999999999986 45531 23333 34432 45799999999999
Q ss_pred HHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l 587 (612)
++++ ++.+.+|++++ +...++++.+++.+++++...
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 335 LLQD--DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred HHCC--HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 9998 67778888776 356689999999998887643
No 77
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.90 E-value=4.9e-22 Score=228.86 Aligned_cols=298 Identities=17% Similarity=0.226 Sum_probs=207.4
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++... .++++.|.+|-..+.- ..|..+. ...
T Consensus 149 d-~vWvhDYhL~llp~~lR~~~------~~~~igfFlHiPFPs~----e~fr~lp----------------------~r~ 195 (797)
T PLN03063 149 D-VVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHTPFPSS----EIYKTLP----------------------SRS 195 (797)
T ss_pred C-EEEEecchhhhHHHHHHHhC------CCCcEEEEecCCCCCH----HHHhhCC----------------------CHH
Confidence 6 59999999999999999875 6899999999543311 1111111 112
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccc--hhhh---hccCeEEeeCCccCCCcCCCcccccccccCcchhhh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 382 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~--~~~~---~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~ 382 (612)
.+-.++..||.|-+.+..+++.+.+... .|.+. ..+. +..+|.+||||||++.|.+.... + .
T Consensus 196 ~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~~~I~viP~GID~~~f~~~~~~-------~----~ 264 (797)
T PLN03063 196 ELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKVTRVAVFPIGIDPERFINTCEL-------P----E 264 (797)
T ss_pred HHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeEEEEEEEecccCHHHHHHHhcC-------h----h
Confidence 3455788999999999999988775211 12111 1111 12478999999999888654210 0 0
Q ss_pred ccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CC----eEEEEEecC-----C--hhHHHHH
Q 007212 383 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTG-----K--KPMEKQL 449 (612)
Q Consensus 383 ~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~----~~lvivG~g-----~--~~~~~~l 449 (612)
.......+++.++ ++++|+++||+++.||++.+++|++.+.+ ++ +.|++++.+ + ..+++++
T Consensus 265 -~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v 338 (797)
T PLN03063 265 -VKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQV 338 (797)
T ss_pred -HHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHH
Confidence 0001123444443 34799999999999999999999999864 44 445544422 2 2355566
Q ss_pred HHHHHHCCCc--------eEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----eEEcCCCCcccce
Q 007212 450 EQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLVDTV 516 (612)
Q Consensus 450 ~~l~~~~~~~--------v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~v 516 (612)
+++....+++ +.++. .++.+++..+|+.||++|+||..||+|++.+|||+||+| +|+|..+|..+.+
T Consensus 339 ~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l 418 (797)
T PLN03063 339 HELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL 418 (797)
T ss_pred HHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh
Confidence 6664222111 22222 346678889999999999999999999999999999999 9999999988876
Q ss_pred ecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 517 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 517 ~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
+.+|+++ +|.|+++++++|.++++++ ++.++++.+.. ....++|...++.+++.|.++...
T Consensus 419 --~~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~ 481 (797)
T PLN03063 419 --GAGALLV----------NPWNITEVSSAIKEALNMS-DEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVE 481 (797)
T ss_pred --cCCeEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhh
Confidence 4468865 9999999999999999963 33333333322 468899999999999999887653
No 78
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.90 E-value=2.8e-21 Score=206.70 Aligned_cols=222 Identities=16% Similarity=0.173 Sum_probs=162.7
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+++..++.||.|+++|+...+.+.. ++ + ++.+|+||+|.+.|.+.... .
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~---~~-~--------~i~~i~ngvd~~~f~~~~~~------------------~ 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR---LN-P--------NVVLVPNGVDYEHFAAARDP------------------P 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh---CC-C--------CEEEcccccCHHHhhccccc------------------C
Confidence 56788899999999999999998875 33 2 89999999999988765321 0
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccCh
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 468 (612)
...+. .. ..+.++|+|+|++.+.++++.+.++++.. ++++|+|+|.++...+ ...+. . ..++.+.+..+.
T Consensus 195 ~~~~~-~~---~~~~~~i~y~G~l~~~~d~~ll~~la~~~--p~~~~vliG~~~~~~~--~~~~~-~-~~nV~~~G~~~~ 264 (373)
T cd04950 195 PPPAD-LA---ALPRPVIGYYGAIAEWLDLELLEALAKAR--PDWSFVLIGPVDVSID--PSALL-R-LPNVHYLGPKPY 264 (373)
T ss_pred CChhH-Hh---cCCCCEEEEEeccccccCHHHHHHHHHHC--CCCEEEEECCCcCccC--hhHhc-c-CCCEEEeCCCCH
Confidence 00001 10 12458999999999988888777666543 7899999999831111 11111 1 246999998888
Q ss_pred HHHHHHHHhccEEEEcCCC-----CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHH
Q 007212 469 PLAHMIIAGADFILIPSRF-----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~-----E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~l 543 (612)
++++.+++.+|++++|+.. +.+|++++||||||+|||+|+.+.+. ..+..+++ .++|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~---~~~~~~~~-----------~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVR---RYEDEVVL-----------IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHH---hhcCcEEE-----------eCCCHHHH
Confidence 9999999999999999864 36799999999999999999865444 33333443 56799999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHH
Q 007212 544 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 544 a~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~ 586 (612)
+++|.+++.+.......+ ..+ +.+.+||+..++++++.+.+
T Consensus 331 ~~ai~~~l~~~~~~~~~~-~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLEDGPARERR-RLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhcCCchHHHH-HHH-HHHHCCHHHHHHHHHHHHHh
Confidence 999999877643333222 222 67889999999999976654
No 79
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.88 E-value=8.5e-22 Score=227.07 Aligned_cols=297 Identities=16% Similarity=0.220 Sum_probs=205.4
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++.+. .+.++.|.+|-..++.. .+.. +| ...
T Consensus 135 d-~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~pfP~~~----~f~~--lp--------------------~~~ 181 (726)
T PRK14501 135 D-VVWVHDYQLMLLPAMLRERL------PDARIGFFLHIPFPSFE----VFRL--LP--------------------WRE 181 (726)
T ss_pred C-EEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCCCCChH----HHhh--CC--------------------ChH
Confidence 6 59999999999999999864 58899999995544221 1111 11 112
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccch--hh-h--hccCeEEeeCCccCCCcCCCcccccccccCcchhhh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--NI-I--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 382 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~~--~~-~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~ 382 (612)
.+-.++..+|.|-+.+..+++.+.+... .|.+.. .+ + +..++.++|||+|++.|.+.... .
T Consensus 182 ~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~------------~ 249 (726)
T PRK14501 182 EILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD------------P 249 (726)
T ss_pred HHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC------------c
Confidence 3455788999999999998887664211 111100 00 0 12368999999999988764210 0
Q ss_pred ccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEEEEEecCC-------hhHHHHH
Q 007212 383 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KPMEKQL 449 (612)
Q Consensus 383 ~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~lvivG~g~-------~~~~~~l 449 (612)
........+++..+ ++++|+++||+++.||++.+++|++.+.+ + +++|+++|.+. .++++++
T Consensus 250 ~~~~~~~~lr~~~~-----~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~ 324 (726)
T PRK14501 250 EVQEEIRRLRQDLR-----GRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREI 324 (726)
T ss_pred hHHHHHHHHHHHcC-----CCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHH
Confidence 00111223444432 45799999999999999999999999864 4 47898887431 2455566
Q ss_pred HHHHHHCCC--------ceE-EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC-----ceEEcCCCCcccc
Q 007212 450 EQLEILYPE--------KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGLVDT 515 (612)
Q Consensus 450 ~~l~~~~~~--------~v~-~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~~e~ 515 (612)
++++.+.++ .+. +...++.+++..+|+.||++++||..||||++++|||+||+ ||++...|+..++
T Consensus 325 ~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l 404 (726)
T PRK14501 325 DELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL 404 (726)
T ss_pred HHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHh
Confidence 665433211 133 33455778888999999999999999999999999999954 6666667887777
Q ss_pred eecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH-HHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 516 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 516 v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~-~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
+ .|+++ +|.|+++++++|.++++++..+...++.+. .....|||+..++++++.|.++...
T Consensus 405 ~----~~llv----------~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~ 466 (726)
T PRK14501 405 A----EALLV----------NPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEK 466 (726)
T ss_pred C----cCeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 5 37865 999999999999999987423333222211 1357899999999999999988653
No 80
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.88 E-value=3.9e-20 Score=198.49 Aligned_cols=216 Identities=16% Similarity=0.133 Sum_probs=159.1
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (612)
.+.+|.++++|+..++.+.+ +|++.+ ++.++++++|.+.+.+... +..++++
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~---~g~~~~------ki~v~g~~v~~~f~~~~~~-------------------~~~~r~~ 199 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALK---RGLEPS------QIRVYGLPIRPSFARAVRP-------------------KDELRRE 199 (382)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECcccCHhhccCCCC-------------------HHHHHHH
Confidence 46899999999999999987 677755 8999999998765443321 5678999
Q ss_pred hCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcc------cCCeE-EEEEecCChhHHHHHHHHHHHCCCceEEEeccC
Q 007212 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI------KENVQ-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 395 ~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~------~~~~~-lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 467 (612)
+|++.+ .++|+++|+....|++..+++++..+. .++.+ ++++|.+. .+.+.++++.. ..++.+.+..+
T Consensus 200 ~gl~~~--~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~--~~~v~~~G~~~ 274 (382)
T PLN02605 200 LGMDED--LPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDW--KIPVKVRGFVT 274 (382)
T ss_pred cCCCCC--CcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcc--cCCeEEEeccc
Confidence 999854 489999999999999999999998753 35666 56677653 34555655422 23466555543
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC------CCcccceecCcceEEecccccccccCCCCCHH
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST------GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~------gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~ 541 (612)
+++.+|++||++|.++ .|++++|||+||+|+|+++. |+. +.+.+++.|+. ..|++
T Consensus 275 --~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~------------~~~~~ 335 (382)
T PLN02605 275 --NMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAF------------SESPK 335 (382)
T ss_pred --cHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceee------------cCCHH
Confidence 4678999999999865 48899999999999999984 444 33444556763 38999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHH
Q 007212 542 AVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 583 (612)
Q Consensus 542 ~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~ 583 (612)
+++++|.+++++. ++.+++|++++. ....+.+.+++.+.++
T Consensus 336 ~la~~i~~ll~~~-~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 336 EIARIVAEWFGDK-SDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHcCC-HHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 9999999999862 456777877763 3445666666555543
No 81
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.87 E-value=4.1e-21 Score=182.02 Aligned_cols=164 Identities=27% Similarity=0.439 Sum_probs=140.3
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcc---cCCeEEEEEecCChhHHHHHHHHHHHC--CCceEE
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI---KENVQIIVLGTGKKPMEKQLEQLEILY--PEKARG 462 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~---~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~ 462 (612)
++..++..+.+. +.++|+|+||+.+.||++.+++|+..+. .+++.++|+|++. ....++.+...+ ..++.+
T Consensus 2 ~~~~~~~~~~~~--~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIPD--KKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT-T--TSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCCC--CCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 556677777764 4589999999999999999999999986 4799999999776 555566665554 357888
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHH
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 542 (612)
.+..+.+++..+++.||++++||..|++|++++|||++|+|||+++.|+..|++.++.+|+++ ++.|+++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~ 147 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLF----------DPNDIEE 147 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEE----------STTSHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEe----------CCCCHHH
Confidence 888888888899999999999999999999999999999999999999999999999999987 8899999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHH
Q 007212 543 VSTTVRRALATYGTQALAEMMKNGM 567 (612)
Q Consensus 543 la~~i~~ll~~~~~~~~~~~~~~~~ 567 (612)
++++|.+++++ ++.++.|++++.
T Consensus 148 l~~~i~~~l~~--~~~~~~l~~~~~ 170 (172)
T PF00534_consen 148 LADAIEKLLND--PELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--HHHHHHHHHHhc
Confidence 99999999999 678888888764
No 82
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.87 E-value=7.8e-21 Score=201.84 Aligned_cols=240 Identities=18% Similarity=0.179 Sum_probs=178.4
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
....+|.+++.|...+..+... -+.+ ....+.+.+-.+|.+.+.+... +.+...+...+.
T Consensus 206 ~~~~~~~~~~ns~~~~~~f~~~---~~~L----~~~d~~~~y~ei~~s~~~~~~~-------------~~~~~~~~~~r~ 265 (495)
T KOG0853|consen 206 TTGLAWKILVNSYFTKRQFKAT---FVSL----SNSDITSTYPEIDGSWFTYGQY-------------ESHLELRLPVRL 265 (495)
T ss_pred hhhccceEecchhhhhhhhhhh---hhhc----CCCCcceeeccccchhcccccc-------------ccchhcccccce
Confidence 4567899999998888887751 1111 2235888899999887765321 111122222333
Q ss_pred HhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc-------CCeEEEEEecC--C------hhHHHHHHHHHHHCC-
Q 007212 394 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTG--K------KPMEKQLEQLEILYP- 457 (612)
Q Consensus 394 ~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~-------~~~~lvivG~g--~------~~~~~~l~~l~~~~~- 457 (612)
..+.. .....+..+.|+.+.||++++++++..+.. .+.+++++|+. + .++.+.+.++.++++
T Consensus 266 ~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 266 YRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred eeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 33332 224688889999999999999999999865 36788999842 1 357778888888874
Q ss_pred --CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccC
Q 007212 458 --EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 458 --~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v 535 (612)
..+.+....+......+++.+...+.....|.||++.+|||+||+|||+++.||..|+|.++.+||++
T Consensus 344 ~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~---------- 413 (495)
T KOG0853|consen 344 LGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLI---------- 413 (495)
T ss_pred cCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceee----------
Confidence 33444455555555567777777776666699999999999999999999999999999999999986
Q ss_pred CCCCHH---HHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHH
Q 007212 536 DPVDVA---AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 536 ~~~d~~---~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+| +.+ .+++++.++.++ ++.+.+|++++ +.+.|||+.+.+++.++.....
T Consensus 414 dp-~~e~~~~~a~~~~kl~~~--p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~ 469 (495)
T KOG0853|consen 414 DP-GQEAVAELADALLKLRRD--PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYL 469 (495)
T ss_pred CC-chHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcC
Confidence 77 555 699999999999 77788888887 5678999999999888887554
No 83
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.87 E-value=2.3e-20 Score=200.84 Aligned_cols=223 Identities=13% Similarity=0.109 Sum_probs=159.8
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (612)
...+|.+++.|+..++.+.+ .|++.+ +|.++.|+++.....+. + +..++++
T Consensus 145 ~~~~d~~~v~s~~~~~~l~~---~gi~~~------ki~v~GiPv~~~f~~~~-~-------------------~~~~~~~ 195 (391)
T PRK13608 145 TPYSTRYYVATKETKQDFID---VGIDPS------TVKVTGIPIDNKFETPI-D-------------------QKQWLID 195 (391)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECeecChHhcccc-c-------------------HHHHHHH
Confidence 45799999999999999986 677655 78887777764332211 1 4456778
Q ss_pred hCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHH
Q 007212 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 474 (612)
Q Consensus 395 ~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 474 (612)
+|++.+. ..++++.|++...||++.+++++.+. .+++++++++.+.+.+.+.+++.... .+++.+.+ |. +.++.+
T Consensus 196 ~~l~~~~-~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~G-~~-~~~~~~ 270 (391)
T PRK13608 196 NNLDPDK-QTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFKS-NENVLILG-YT-KHMNEW 270 (391)
T ss_pred cCCCCCC-CEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEEe-cc-chHHHH
Confidence 8987542 34567799999999999999986432 26789876654333344444443222 23566555 43 346789
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 475 ~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
++.||++|. ++.|++++|||++|+|+|+++. +| ...++.+.+.|+. ..|.++++++|.+
T Consensus 271 ~~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~------------~~~~~~l~~~i~~ 334 (391)
T PRK13608 271 MASSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI------------ADTPEEAIKIVAS 334 (391)
T ss_pred HHhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE------------eCCHHHHHHHHHH
Confidence 999999995 4579999999999999999964 33 1123334455653 4699999999999
Q ss_pred HHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
++++ ++.+.+|++++. .+.++++.+++++++++..+..
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 335 LTNG--NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred HhcC--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 9988 678888888874 5679999999999998876654
No 84
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.87 E-value=4.1e-20 Score=201.23 Aligned_cols=234 Identities=16% Similarity=0.122 Sum_probs=164.2
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+++..++.+|.|+++|+..++.+.+ .|++ +. +.+++|+ +.+.+.+... ....
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~---~g~~------~~-i~vi~n~-~~d~~~~~~~----------------~~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA---LGAK------NE-VTVTGNL-KFDIEVPPEL----------------AARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCC------CC-cEecccc-cccCCCChhh----------------HHHH
Confidence 34567788999999999999999986 5654 12 7788884 3332221110 1123
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCc-e-----
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEK-A----- 460 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~-v----- 460 (612)
..++++++ + +.++++++|+. .|+.+.+++|++++.+ ++++|+|+|+|+.. .+.++++..+.+-. +
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPER-FKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhh-HHHHHHHHHhCCCcEEEccCC
Confidence 45677776 3 34788888874 6889999999999865 79999999998732 24455555544311 1
Q ss_pred --------EEEeccChHHHHHHHHhccEEEE-cCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecC-cceEEecccc
Q 007212 461 --------RGVAKFNIPLAHMIIAGADFILI-PSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEG-FTGFQMGSFS 529 (612)
Q Consensus 461 --------~~~~~~~~~~~~~i~~~aDv~v~-pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g-~~G~~~~~~~ 529 (612)
..++. ...++..+|+.||++++ +|..|++|.+++|||+||+|||+++. ++..|+++.. .+|+++
T Consensus 296 ~~~~~~~~v~l~~-~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~---- 370 (425)
T PRK05749 296 EPPSADTDVLLGD-TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAI---- 370 (425)
T ss_pred CCCCCCCcEEEEe-cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeE----
Confidence 11122 23456789999999666 67779999999999999999999864 6666665542 356655
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 530 VDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 530 ~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
.+.|+++|+++|.+++++ ++.+.+|++++...--+....++++.+++.+.+.
T Consensus 371 ------~~~d~~~La~~l~~ll~~--~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l~ 422 (425)
T PRK05749 371 ------QVEDAEDLAKAVTYLLTD--PDARQAYGEAGVAFLKQNQGALQRTLQLLEPYLP 422 (425)
T ss_pred ------EECCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhcc
Confidence 789999999999999998 7778888888743211225778888888877654
No 85
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.84 E-value=2.5e-19 Score=175.53 Aligned_cols=117 Identities=28% Similarity=0.442 Sum_probs=96.1
Q ss_pred EEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc-ChHHHHHHHHhccEEEEc
Q 007212 408 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIAGADFILIP 484 (612)
Q Consensus 408 ~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~i~~~aDv~v~p 484 (612)
|+|++.+.||++.+++++..+.+ ++++++++|.+.................++.+.+.+ ..+....+++.||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999976 599999999987432222111122234568777776 455666677779999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEE
Q 007212 485 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQ 524 (612)
Q Consensus 485 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~ 524 (612)
|..|++|++++|||++|+|+|+|+.++..|++.++.+|++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~ 228 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLL 228 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEE
Confidence 9999999999999999999999999999999999999986
No 86
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.84 E-value=3.4e-19 Score=193.07 Aligned_cols=290 Identities=16% Similarity=0.149 Sum_probs=206.0
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++... .+.++-|.+|-..+.. ..+..+ | ...
T Consensus 134 d-~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHiPFPs~----eifr~L--P--------------------~r~ 180 (487)
T TIGR02398 134 A-TVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHTPFPSA----DVFNIL--P--------------------WRE 180 (487)
T ss_pred C-EEEEecchhhHHHHHHHHhC------CCCeEEEEeeCCCCCh----HHHhhC--C--------------------chH
Confidence 6 59999999999999999874 5889999999543311 111111 1 123
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccchh-----------------------h---hhccCeEEeeCCccCC
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----------------------I---IRKTGIKGIVNGMDVQ 361 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~~~-----------------------~---~~~~~i~vI~ngvd~~ 361 (612)
.+-.++..+|.|-+.+..+++.+.+... .|.+... + =+..++.++|.|||++
T Consensus 181 ~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGID~~ 260 (487)
T TIGR02398 181 QIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGTDPE 260 (487)
T ss_pred HHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEecHH
Confidence 3455788999999999999988775221 1211100 0 0223589999999999
Q ss_pred CcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEE
Q 007212 362 EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQI 435 (612)
Q Consensus 362 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~l 435 (612)
.|.+.... ..-....+.++++++ ++++|++++|++..||++..++|++++.+ | ++.|
T Consensus 261 ~f~~~~~~------------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~L 323 (487)
T TIGR02398 261 RIRSALAA------------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTL 323 (487)
T ss_pred HHHHHhcC------------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEE
Confidence 88654210 001122445777776 34799999999999999999999999865 4 5799
Q ss_pred EEEecCC-------hhHHHHHHHHHHHCCC---------ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHH
Q 007212 436 IVLGTGK-------KPMEKQLEQLEILYPE---------KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMR 499 (612)
Q Consensus 436 vivG~g~-------~~~~~~l~~l~~~~~~---------~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma 499 (612)
+++|.+. .++.+++++++.+.++ .+.+...++.+++..+|+.||++++||..||++++..|+++
T Consensus 324 vqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva 403 (487)
T TIGR02398 324 VTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVA 403 (487)
T ss_pred EEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHh
Confidence 9998764 2466677776655321 13344455778888999999999999999999999999999
Q ss_pred cCC----ceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhcCcH
Q 007212 500 YGT----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWK 574 (612)
Q Consensus 500 ~G~----PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~ 574 (612)
|+. |+|.|..+|..+.+. .+++ |+|.|+++++++|.++|+++..++.+++.+.. ....++-.
T Consensus 404 ~~~~~~GvLILSefaGaa~~l~---~All----------VNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~ 470 (487)
T TIGR02398 404 AQGLLDGVLVLSEFAGAAVELK---GALL----------TNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQ 470 (487)
T ss_pred hhcCCCCCEEEeccccchhhcC---CCEE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHH
Confidence 988 999999999887763 3665 49999999999999999996444444443322 34556655
Q ss_pred HHHHHHHH
Q 007212 575 GPAKKWEE 582 (612)
Q Consensus 575 ~~a~~~~~ 582 (612)
.-++.+++
T Consensus 471 ~W~~~fl~ 478 (487)
T TIGR02398 471 RWADEFLA 478 (487)
T ss_pred HHHHHHHH
Confidence 55555554
No 87
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.78 E-value=2.2e-16 Score=166.33 Aligned_cols=185 Identities=16% Similarity=0.097 Sum_probs=136.3
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHH
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..+++..++.+|.++++|+.+++.+.+ .|+..+ ++.+++|+.+.....+..
T Consensus 114 ~~~~~~~~~~aD~iI~~S~~~~~~l~~---~g~~~~------~i~~~~~~~~~~~~~~~~-------------------- 164 (333)
T PRK09814 114 MKEEIDMLNLADVLIVHSKKMKDRLVE---EGLTTD------KIIVQGIFDYLNDIELVK-------------------- 164 (333)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcC------ceEecccccccccccccc--------------------
Confidence 356778899999999999999999986 566433 666666655432111100
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccC
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 467 (612)
.....+.|+|+|++....++. + ..++++|+|+|+|+... ...+++.+.+.++
T Consensus 165 -----------~~~~~~~i~yaG~l~k~~~l~---~-----~~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~ 216 (333)
T PRK09814 165 -----------TPSFQKKINFAGNLEKSPFLK---N-----WSQGIKLTVFGPNPEDL---------ENSANISYKGWFD 216 (333)
T ss_pred -----------cccCCceEEEecChhhchHHH---h-----cCCCCeEEEECCCcccc---------ccCCCeEEecCCC
Confidence 011346899999999543221 1 23679999999997321 2345799999999
Q ss_pred hHHHHHHHHhccEEEEcCCC-----------CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCC
Q 007212 468 IPLAHMIIAGADFILIPSRF-----------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~-----------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~ 536 (612)
.+++..+++. |+.+++... -.+|.++.++||||+|||+++.+++.|+|+++.+|+++ +
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v----------~ 285 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVV----------D 285 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEe----------C
Confidence 9999888888 776665421 35788999999999999999999999999999999975 4
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 007212 537 PVDVAAVSTTVRRALATYGTQALAEMMKNG 566 (612)
Q Consensus 537 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~ 566 (612)
+.+++++.+..+. ++.+.+|++++
T Consensus 286 --~~~el~~~l~~~~----~~~~~~m~~n~ 309 (333)
T PRK09814 286 --SLEELPEIIDNIT----EEEYQEMVENV 309 (333)
T ss_pred --CHHHHHHHHHhcC----HHHHHHHHHHH
Confidence 7889999998753 34677777776
No 88
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.77 E-value=4.8e-17 Score=172.99 Aligned_cols=216 Identities=17% Similarity=0.153 Sum_probs=145.7
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
..+.+|.++++|+..++.+.+ .|++.+ +|.+++|++ |...+.+... .....+
T Consensus 138 ~~~~ad~~~~~s~~~~~~l~~---~G~~~~------kI~vign~v~d~~~~~~~~~------------------~~~~~~ 190 (363)
T cd03786 138 IDKLSDLHFAPTEEARRNLLQ---EGEPPE------RIFVVGNTMIDALLRLLELA------------------KKELIL 190 (363)
T ss_pred HHHHhhhccCCCHHHHHHHHH---cCCCcc------cEEEECchHHHHHHHHHHhh------------------ccchhh
Confidence 356789999999999999886 677655 899999985 5433221110 011123
Q ss_pred HHhCCCCCCCCcEEEEEccCcc---ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHC---CCceEEEecc
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY---PEKARGVAKF 466 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~---~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~---~~~v~~~~~~ 466 (612)
+.++++. +..++++.||... .||++.+++|++++.+.++++++.|.+. ..+.+++...++ .+++.+.+..
T Consensus 191 ~~~~~~~--~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~ 266 (363)
T cd03786 191 ELLGLLP--KKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPL 266 (363)
T ss_pred hhcccCC--CCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCc
Confidence 5667753 3367788999874 7999999999999854457776666555 444555544443 2457666544
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCcceEEecccccccccCCCCCHHHHHH
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~ 545 (612)
....+..+++.||++|.+|- | ++.|||++|+|+|+++. +..++.++.|. +.. ...|++++++
T Consensus 267 ~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~-~~~-----------~~~~~~~i~~ 329 (363)
T cd03786 267 GYLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESGT-NVL-----------VGTDPEAILA 329 (363)
T ss_pred CHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-EEe-----------cCCCHHHHHH
Confidence 56677789999999999984 4 57999999999999975 44566666543 332 2347999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~ 583 (612)
+|.+++++ +.....|. ...|.--+.+++..++
T Consensus 330 ~i~~ll~~--~~~~~~~~----~~~~~~~~a~~~I~~~ 361 (363)
T cd03786 330 AIEKLLSD--EFAYSLMS----INPYGDGNASERIVEI 361 (363)
T ss_pred HHHHHhcC--chhhhcCC----CCCCCCCHHHHHHHHH
Confidence 99999987 44444443 2334433444554443
No 89
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.77 E-value=2.5e-16 Score=168.72 Aligned_cols=218 Identities=17% Similarity=0.118 Sum_probs=145.0
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
..+.+|.++++|+..++.+.+ .|+ ++.++.|.+..... +.. .+..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~~---~g~---------~~~~~G~p~~~~~~-~~~-------------------~~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYDK---LGV---------PVTFVGHPLADAIP-LLP-------------------DRAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHHh---cCC---------CeEEECcCHHHhcc-ccc-------------------ChHHHHH
Confidence 467889999999998888775 332 34444444432111 100 1456778
Q ss_pred HhCCCCCCCCcEE-EEEc-cCccc-cCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC-CCceEEEeccC
Q 007212 394 EVGLPVDRNIPVI-GFIG-RLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFN 467 (612)
Q Consensus 394 ~~gl~~~~~~~~i-~~iG-rl~~~-Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~-~~~v~~~~~~~ 467 (612)
+++++.+. +++ ++.| |..+. ++++.+++|++.+.+ ++++++++|.+. ..++.++++..+. +..+.. +.
T Consensus 179 ~l~~~~~~--~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~v~~---~~ 252 (380)
T PRK00025 179 RLGLDPDA--RVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-KRREQIEEALAEYAGLEVTL---LD 252 (380)
T ss_pred HcCCCCCC--CEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh-hhHHHHHHHHhhcCCCCeEE---Ec
Confidence 88887543 554 4445 44444 457999999998864 589999987632 2445566655554 322332 22
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-----------------CCCCcccceecCc--ceEEeccc
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-----------------STGGLVDTVEEGF--TGFQMGSF 528 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-----------------~~gg~~e~v~~g~--~G~~~~~~ 528 (612)
++...+|+.||++|.+| |.+.+|||++|+|+|++ +.+++++++.++. .+++
T Consensus 253 -~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---- 322 (380)
T PRK00025 253 -GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELL---- 322 (380)
T ss_pred -ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhc----
Confidence 35668999999999987 88999999999999987 4566677776653 3443
Q ss_pred ccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHH
Q 007212 529 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 529 ~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
++..|++++++.+.+++++ ++.+++|++++ ..+.. -...+++..+.+.++.
T Consensus 323 ------~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 323 ------QEEATPEKLARALLPLLAD--GARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred ------CCCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 3778999999999999998 77777887775 33333 3345566666555544
No 90
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.76 E-value=4.2e-16 Score=167.92 Aligned_cols=437 Identities=19% Similarity=0.237 Sum_probs=225.3
Q ss_pred ccccHHHHhhchHHHHHhC-CCeEEEEEecCCcccc----ccCccEE-EE---EEeCCeeeEEEEEEeeecCceEEE-Ee
Q 007212 99 KTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQYKD----AWDTDVV-IE---LKVGDKIEKVRFFHCHKRGVDRVF-VD 168 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~~~~~~~----~~~~~~~-~~---~~~~~~~~~~~~~~~~~~gv~~~~-v~ 168 (612)
+.||+-+|+..=|+.+++. |.+..+|.|...+... ..+.... +. .......-.+++-+..++|.+++. +|
T Consensus 9 KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~~~e~e~~e~~~~~l~~~~~~~~~~Gl~v~~GRWlI~G~P~vIL~D 88 (633)
T PF05693_consen 9 KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNARTEVEEIEPDNPLLKDALESMREEGLKVRYGRWLIPGRPIVILFD 88 (633)
T ss_dssp -SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTHHHHEEE--SSSGGHHHHHHHHHHTT-EEEEEEESSTT--EEEEEE
T ss_pred ccCCeehhhhccHHHHHHHHCCeEEEECCCCCcccCCCCCcCCCCCHHHHHHHHHHHhCCCeEEEeceeECCcCeEEEEe
Confidence 6899999999988888875 8889999886543211 0000000 00 000011123555666777877664 45
Q ss_pred Ccccccc-------ccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 169 HPWFLAK-------VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 169 ~~~~~~~-------~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
...++.+ .|-..+-. .+..+.||.+ ...|...+...++.+..... .++.||.|+|+|+++
T Consensus 89 ~~s~~~~ldeik~~lW~~~gId--S~~~~~dyne-a~~Fgyava~fi~~f~~~~~----------~~~~ViaHfHEWmaG 155 (633)
T PF05693_consen 89 FGSFFWKLDEIKGELWELFGID--SPHGDGDYNE-AVMFGYAVAWFIEEFYKFYE----------EKPKVIAHFHEWMAG 155 (633)
T ss_dssp GGGGGGGHHHHHHHHHHHH-------TT-HHHHH-HHHHHHHHHHHHHHHHHH-S-----------SEEEEEEEESGGGT
T ss_pred CchHHHHHHHHHHHHHHHcCCC--CCCCCcchhH-HHHHHHHHHHHHHHHHHhhc----------CCCcEEEEechHhHh
Confidence 5443322 44211100 0111112221 12233333333333333221 146899999999999
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCccccc-CcccccccCCCcccccccccccCCC---CCcCCchhHHHHHHHhh
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYN---KPVRGRKINWMKAGILE 317 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~k~~l~~ 317 (612)
....+++... ..+..|||.|.... ||. +... ..+...+...++-. ++-..-+...++.+...
T Consensus 156 ~gll~lr~~~------~~VaTvFTTHAT~l-GR~l~~~~-------~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA~~ 221 (633)
T PF05693_consen 156 VGLLYLRKRK------PDVATVFTTHATLL-GRYLAANN-------KDFYNNLDKFNGDQEAGERNIYHKHSIERAAAHY 221 (633)
T ss_dssp THHHHHHHTT-------SCEEEEEESS-HH-HHHHTTTS-------S-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHHHH
T ss_pred HHHHHHhccC------CCeeEEEEecccch-hhHhhcCC-------CcHHHHhhccCccccccCccchHHHHHHHHHHHh
Confidence 9999988764 58899999997754 432 1100 00111111000000 00011245667888999
Q ss_pred CCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHH----H
Q 007212 318 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ----A 393 (612)
Q Consensus 318 ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~----~ 393 (612)
||.+.|||+-.+.+.... .+.. .=.|+|||++...|..... ....+...|+.+. .
T Consensus 222 AdvFTTVSeITa~Ea~~L--L~r~--------pDvV~pNGl~v~~~~~~~e-----------fqnl~~~~k~ki~~fv~~ 280 (633)
T PF05693_consen 222 ADVFTTVSEITAKEAEHL--LKRK--------PDVVTPNGLNVDKFPALHE-----------FQNLHAKAKEKIHEFVRG 280 (633)
T ss_dssp SSEEEESSHHHHHHHHHH--HSS----------SEE----B-GGGTSSTTH-----------HHHHHHHHHHHHHHHHHH
T ss_pred cCeeeehhhhHHHHHHHH--hCCC--------CCEEcCCCccccccccchH-----------HHHHHHHHHHHHHHHHHH
Confidence 999999999999887741 2222 3367899999987754421 0111222333332 2
Q ss_pred Hh-CC-CCC-CCCcEEEEEccCc-cccCHHHHHHHHHhccc------CCe---EEEEEecCC--------------hhHH
Q 007212 394 EV-GL-PVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK------ENV---QIIVLGTGK--------------KPME 446 (612)
Q Consensus 394 ~~-gl-~~~-~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~------~~~---~lvivG~g~--------------~~~~ 446 (612)
.+ |. .-+ ++..+|...||.+ .+||+|.+|+|+..|.. .+. -|+|+=... +.+.
T Consensus 281 ~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l~~~a~~~~l~ 360 (633)
T PF05693_consen 281 HFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESLKGQAVTKQLR 360 (633)
T ss_dssp HSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHHHHHHHHHHHH
T ss_pred HhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHHhhHHHHHHHH
Confidence 22 21 112 2345777799998 79999999999998843 232 344432210 0000
Q ss_pred -------------------------------------------------------------------HHHHHHHHHC---
Q 007212 447 -------------------------------------------------------------------KQLEQLEILY--- 456 (612)
Q Consensus 447 -------------------------------------------------------------------~~l~~l~~~~--- 456 (612)
..++++...+
T Consensus 361 ~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~irr~~L~N~~~ 440 (633)
T PF05693_consen 361 DTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMIRRLGLFNNPE 440 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHHHHTT----TT
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHHHhCCCCCCCC
Confidence 0111111111
Q ss_pred -CCceEEEeccCh-------HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec-----CcceE
Q 007212 457 -PEKARGVAKFNI-------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-----GFTGF 523 (612)
Q Consensus 457 -~~~v~~~~~~~~-------~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-----g~~G~ 523 (612)
..+|.+++.|.. -...+++.+||+.|+||.+||+|.+.+|+.++|+|.|+|+..|+..++.+ ...|+
T Consensus 441 drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~~~~GV 520 (633)
T PF05693_consen 441 DRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDPEEYGV 520 (633)
T ss_dssp -SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HHGGGTE
T ss_pred CceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccCcCCcE
Confidence 124555555511 11236899999999999999999999999999999999999998766654 23565
Q ss_pred EecccccccccCCCCCHHHHHHHHHHHHHhh---CHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 524 QMGSFSVDCEAVDPVDVAAVSTTVRRALATY---GTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 524 ~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~---~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
.+-.. ...+.++.++.|.+.+.+. .+.++..+..++ +++.++|+.....|.+.|..++..
T Consensus 521 ~VvdR-------~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL~~ 585 (633)
T PF05693_consen 521 YVVDR-------RDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLALRR 585 (633)
T ss_dssp EEE-S-------SSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHHHH
T ss_pred EEEeC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHh
Confidence 54111 2245555555555555433 123333443333 679999999999999999987754
No 91
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.75 E-value=1.3e-16 Score=170.11 Aligned_cols=200 Identities=20% Similarity=0.157 Sum_probs=141.7
Q ss_pred hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHHHHHH
Q 007212 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (612)
+.+|.++++|+..++.+.+ .|++.+ +|.+++|++ |...+.+.. .....++++
T Consensus 140 ~~ad~~~~~s~~~~~~l~~---~G~~~~------~I~vign~~~d~~~~~~~~------------------~~~~~~~~~ 192 (365)
T TIGR00236 140 HIADLHFAPTEQAKDNLLR---ENVKAD------SIFVTGNTVIDALLTNVEI------------------AYSSPVLSE 192 (365)
T ss_pred HHHHhccCCCHHHHHHHHH---cCCCcc------cEEEeCChHHHHHHHHHhh------------------ccchhHHHh
Confidence 3589999999999999986 687765 899999996 432221110 002344555
Q ss_pred hCCCCCCCCcEEEEEc-cCc-cccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHH
Q 007212 395 VGLPVDRNIPVIGFIG-RLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 395 ~gl~~~~~~~~i~~iG-rl~-~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 470 (612)
++. +.+++++.+ |.+ ..||++.+++|+.++.+ +++++++.|.+.....+.+.+.. ...+++.+........
T Consensus 193 ~~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 267 (365)
T TIGR00236 193 FGE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLD 267 (365)
T ss_pred cCC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHH
Confidence 652 124555555 543 45899999999999854 58899988655433333333322 2334677777666666
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
...+++.||+++.+| |..++|||++|+|+|++ +.|+..+++.++ .++++ +.|++++++++.+
T Consensus 268 ~~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-----------~~d~~~i~~ai~~ 330 (365)
T TIGR00236 268 FLNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-----------GTDKENITKAAKR 330 (365)
T ss_pred HHHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-----------CCCHHHHHHHHHH
Confidence 668999999999887 66789999999999996 678888888766 45542 4799999999999
Q ss_pred HHHhhCHHHHHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNG 566 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~ 566 (612)
++++ ++.+++++.+.
T Consensus 331 ll~~--~~~~~~~~~~~ 345 (365)
T TIGR00236 331 LLTD--PDEYKKMSNAS 345 (365)
T ss_pred HHhC--hHHHHHhhhcC
Confidence 9987 66666666554
No 92
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.75 E-value=2.6e-16 Score=180.89 Aligned_cols=297 Identities=17% Similarity=0.206 Sum_probs=202.3
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|.+||+|..++|.+++... .++++-|.+|-..+.. ..|..+- ...
T Consensus 233 D-~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHiPFPs~----Eifr~LP----------------------~r~ 279 (934)
T PLN03064 233 D-VVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHTPFPSS----EIHRTLP----------------------SRS 279 (934)
T ss_pred C-EEEEecchhhHHHHHHHHhC------CCCcEEEEecCCCCCh----HHHhhCC----------------------cHH
Confidence 6 59999999999999999874 6889999999543311 1111111 123
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CCccc--hhhh---hccCeEEeeCCccCCCcCCCcccccccccCcchhhh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMD 382 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G~~~--~~~~---~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~ 382 (612)
-+-.++..||.|-+.+..+++.+.+... .|.+. ..+. +..++.++|-|||++.|...... .
T Consensus 280 elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~------------~ 347 (934)
T PLN03064 280 ELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET------------P 347 (934)
T ss_pred HHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC------------h
Confidence 3455788999999999999988875221 12211 1111 12257788999999888543210 0
Q ss_pred ccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CC----eEEEEEe-----cCC--hhHHHHH
Q 007212 383 AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLG-----TGK--KPMEKQL 449 (612)
Q Consensus 383 ~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~----~~lvivG-----~g~--~~~~~~l 449 (612)
.-....+.+++.++ ++.+|++++|++..||+...++|++.+.+ |+ +.|+-+. +++ .+++.++
T Consensus 348 ~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V 422 (934)
T PLN03064 348 QVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQV 422 (934)
T ss_pred hHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHH
Confidence 00112345666664 44799999999999999999999998754 43 3444333 222 2344555
Q ss_pred HHHHHHCCCc--------eEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC----ceEEcCCCCcccce
Q 007212 450 EQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLVDTV 516 (612)
Q Consensus 450 ~~l~~~~~~~--------v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~----PvI~s~~gg~~e~v 516 (612)
.++..+.+.+ +.++. .++.+++..+|+.||++++||..||++++.+|||+|+. ++|.|...|..+.+
T Consensus 423 ~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L 502 (934)
T PLN03064 423 HEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL 502 (934)
T ss_pred HHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh
Confidence 5554432211 22222 24677788899999999999999999999999999954 55668888888777
Q ss_pred ecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHH
Q 007212 517 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 517 ~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
+..++++ +|.|+++++++|.++++.+ .++++++.++. ....+||..-++.+++-+.....
T Consensus 503 --~~~AllV----------NP~D~~~vA~AI~~AL~M~-~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~ 564 (934)
T PLN03064 503 --GAGAILV----------NPWNITEVAASIAQALNMP-EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVV 564 (934)
T ss_pred --CCceEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHh
Confidence 3357765 9999999999999999963 33444443333 46779999999998887776653
No 93
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.72 E-value=1.5e-15 Score=156.47 Aligned_cols=223 Identities=28% Similarity=0.449 Sum_probs=169.9
Q ss_pred hCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhC
Q 007212 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 396 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 396 (612)
..+.+++.+......+.. .+. ..++.+++|+++...+.+. ..+
T Consensus 150 ~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~---------------------------~~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA---LGV-------PNKIVVIPNGIDTEKFAPA---------------------------RIG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH---hCC-------CCCceEecCCcCHHHcCcc---------------------------ccC
Confidence 478899999988666554 221 1168889999998877542 011
Q ss_pred CCCCCCCcEEEEEccCccccCHHHHHHHHHhcccC--CeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHH
Q 007212 397 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 472 (612)
Q Consensus 397 l~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~ 472 (612)
+..+.....++++||+.+.||++.+++++..+... ++.++++|.++.. ...+.++..+.. .++.+.+..+.++..
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHHHH
Confidence 22111136999999999999999999999999763 4899999998743 223333444332 457776666656666
Q ss_pred HHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
.+++.||++++||.+|++|++++|||++|+|+|+++.++..+++.++.+|+++ .+.|.+++++++..+++
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV----------PPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec----------CCCCHHHHHHHHHHHhc
Confidence 78999999999999999999999999999999999999999999998778843 66689999999999998
Q ss_pred hhCHHHHHHHHH---HHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMK---NGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 553 ~~~~~~~~~~~~---~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
+ .+.++.+.. +.....|+|+..++++.+++.....
T Consensus 342 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 342 D--PELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred C--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 8 344455543 2234799999999999999987753
No 94
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.68 E-value=1.9e-14 Score=143.49 Aligned_cols=223 Identities=15% Similarity=0.160 Sum_probs=168.2
Q ss_pred hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHh
Q 007212 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 395 (612)
..+|.+++.|......+.+. .+. ....+|+...+++.+ .+..
T Consensus 221 ~~ad~vm~NssWT~nHI~qi--W~~--------~~~~iVyPPC~~e~l----------------------------ks~~ 262 (465)
T KOG1387|consen 221 SKADIVMTNSSWTNNHIKQI--WQS--------NTCSIVYPPCSTEDL----------------------------KSKF 262 (465)
T ss_pred ccceEEEecchhhHHHHHHH--hhc--------cceeEEcCCCCHHHH----------------------------HHHh
Confidence 47899999999988888762 221 266777766665433 2223
Q ss_pred CCCCCCCCcEEEEEccCccccCHH-HHHHHHHhccc------CCeEEEEEecCC----hhHHHHHHHHHHHC--CCceEE
Q 007212 396 GLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILY--PEKARG 462 (612)
Q Consensus 396 gl~~~~~~~~i~~iGrl~~~Kg~d-~li~A~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~--~~~v~~ 462 (612)
+. ++.+.+.++++|.+.|.|+.. +-++|+-.... ++++|+|+|+-. .+.-+.+++++..+ +.++.+
T Consensus 263 ~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~F 341 (465)
T KOG1387|consen 263 GT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQF 341 (465)
T ss_pred cc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceEE
Confidence 33 334558999999999999999 33444444433 479999999843 34556667777654 467888
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc-cceec---CcceEEecccccccccCCCC
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~---g~~G~~~~~~~~~~~~v~~~ 538 (612)
....+-+.+-.++..|.+.|..-..|-||+.+.|+||+|+.+|+.+.||.. |+|.+ ..+||++ .
T Consensus 342 ~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla------------~ 409 (465)
T KOG1387|consen 342 EKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA------------P 409 (465)
T ss_pred EecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec------------C
Confidence 888888888899999999999999999999999999999999999988755 67764 3579964 6
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHHHc
Q 007212 539 DVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 539 d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
+.++.++++.+++... .+.+..|++++. ..+|+-....+.|...+..++.+
T Consensus 410 t~~EYaE~iLkIv~~~-~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 410 TDEEYAEAILKIVKLN-YDERNMMRRNARKSLARFGELKFDKDWENPICKLLEE 462 (465)
T ss_pred ChHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhcc
Confidence 7889999999999873 334666666663 57899999999999888888753
No 95
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=1.6e-12 Score=130.07 Aligned_cols=299 Identities=17% Similarity=0.224 Sum_probs=187.2
Q ss_pred CCcEEEEeCC-CcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCc
Q 007212 228 KKNVVFVAND-WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvVi~~h~-~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
.||.|++-|- -...++.|++.... ++++.+++.||..|. . .++ +..|...|+. +
T Consensus 103 ~~~~ilvQNPP~iPtliv~~~~~~l------~~~KfiIDWHNy~Ys-l-------~l~----------~~~g~~h~lV-~ 157 (444)
T KOG2941|consen 103 PPDIILVQNPPSIPTLIVCVLYSIL------TGAKFIIDWHNYGYS-L-------QLK----------LKLGFQHPLV-R 157 (444)
T ss_pred CCcEEEEeCCCCCchHHHHHHHHHH------hcceEEEEehhhHHH-H-------HHH----------hhcCCCCchH-H
Confidence 5797555542 11223444444332 699999999998873 0 000 1111111221 2
Q ss_pred hhHHH-HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCcc-----CCC----cCCCcccccccccC
Q 007212 307 KINWM-KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD-----VQE----WNPLTDKYIGVKYD 376 (612)
Q Consensus 307 ~~~~~-k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd-----~~~----~~p~~~~~~~~~~~ 376 (612)
...|. +..-+.||.-+||++.+++++.+. .|+. +..+++.-.. .+. |.+.. ..++
T Consensus 158 l~~~~E~~fgk~a~~nLcVT~AMr~dL~qn--Wgi~--------ra~v~YDrPps~~~~l~~~H~lf~~l~-----~d~~ 222 (444)
T KOG2941|consen 158 LVRWLEKYFGKLADYNLCVTKAMREDLIQN--WGIN--------RAKVLYDRPPSKPTPLDEQHELFMKLA-----GDHS 222 (444)
T ss_pred HHHHHHHHhhcccccchhhHHHHHHHHHHh--cCCc--------eeEEEecCCCCCCCchhHHHHHHhhhc-----cccc
Confidence 23333 444567999999999999988863 5543 3444543211 111 11111 1111
Q ss_pred cch--hhhccHHHHHHHHHHhC---CCCCCC-CcEEEEEccCccccCHHHHHHHHHhcc-----c----CCeEEEEEecC
Q 007212 377 AST--VMDAKPLLKEALQAEVG---LPVDRN-IPVIGFIGRLEEQKGSDILAAAIPHFI-----K----ENVQIIVLGTG 441 (612)
Q Consensus 377 ~~~--~~~~~~~~~~~l~~~~g---l~~~~~-~~~i~~iGrl~~~Kg~d~li~A~~~l~-----~----~~~~lvivG~g 441 (612)
+-. ..+.+..+..++-++.. ..-.++ ..+++..-.+++..++.+|++|+.... + |++-++|-|.|
T Consensus 223 ~f~ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKG 302 (444)
T KOG2941|consen 223 PFRAREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKG 302 (444)
T ss_pred hhhhcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCC
Confidence 111 12334444444444443 000112 246777777999999999999998442 1 57778888888
Q ss_pred C--hhHHHHHHHHHHHCCCceEE-EeccChHHHHHHHHhccEEEEcCCC---CCCcHHHHHHHHcCCceEEcCCCCcccc
Q 007212 442 K--KPMEKQLEQLEILYPEKARG-VAKFNIPLAHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTVPIVASTGGLVDT 515 (612)
Q Consensus 442 ~--~~~~~~l~~l~~~~~~~v~~-~~~~~~~~~~~i~~~aDv~v~pS~~---E~~gl~~lEAma~G~PvI~s~~gg~~e~ 515 (612)
+ +.|.+++++...+ ++.+ .++...++.+.+++.||+.|.--.. --.|+++++-.-||+||++-+...+.|+
T Consensus 303 PlkE~Y~~~I~~~~~~---~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~EL 379 (444)
T KOG2941|consen 303 PLKEKYSQEIHEKNLQ---HVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDEL 379 (444)
T ss_pred chhHHHHHHHHHhccc---ceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHH
Confidence 8 3444444444332 3443 3444778888999999997754332 3479999999999999999999999999
Q ss_pred eecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC--HHHHHHHHHHHH-HhhcCcHHHHHHHH
Q 007212 516 VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGM-AQDLSWKGPAKKWE 581 (612)
Q Consensus 516 v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~--~~~~~~~~~~~~-~~~fsw~~~a~~~~ 581 (612)
|+|+.||++| .|.++|++.++.+.++.. ...+.++.++.. .+...|+...++..
T Consensus 380 Vkh~eNGlvF------------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~~~ 436 (444)
T KOG2941|consen 380 VKHGENGLVF------------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWERTA 436 (444)
T ss_pred HhcCCCceEe------------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHHhh
Confidence 9999999988 899999999999999542 367777777775 46677776655443
No 96
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.58 E-value=6.5e-15 Score=133.67 Aligned_cols=130 Identities=29% Similarity=0.378 Sum_probs=94.5
Q ss_pred CcEEEEEccCccccCHHHHHH-HHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 403 IPVIGFIGRLEEQKGSDILAA-AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~-A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
.++|+++|++.+.|+++.+++ +++++.+ ++++|+|+|.+++ +++++ .. .++.+.+.. ++...+++.||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~----~l~~~-~~--~~v~~~g~~--~e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD----ELKRL-RR--PNVRFHGFV--EELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCH-HH--CTEEEE-S---HHHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH----HHHHh-cC--CCEEEcCCH--HHHHHHHHhCC
Confidence 378999999999999999999 9998865 7999999999875 24444 22 258888887 46778999999
Q ss_pred EEEEcCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 480 FILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 v~v~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+++.|+. .++++.+++|||++|+|+|+++. +..+++.....|.. -.+|+++++++|.++++|
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~-----------~~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVL-----------VANDPEELAEAIERLLND 135 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE------------TT-HHHHHHHHHHHHH-
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEE-----------ECCCHHHHHHHHHHHhcC
Confidence 9999997 57899999999999999999999 56777765556664 378999999999999875
No 97
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.53 E-value=5.4e-12 Score=135.47 Aligned_cols=191 Identities=15% Similarity=0.079 Sum_probs=120.3
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
+...+.+|.+++.++...+.+.. .|. +..++.|++-........ .+...
T Consensus 133 r~l~~~~d~v~~~~~~e~~~~~~---~g~---------~~~~vGnPv~~~~~~~~~-------------------~~~~~ 181 (385)
T TIGR00215 133 KKIEKATDFLLAILPFEKAFYQK---KNV---------PCRFVGHPLLDAIPLYKP-------------------DRKSA 181 (385)
T ss_pred HHHHHHHhHhhccCCCcHHHHHh---cCC---------CEEEECCchhhhccccCC-------------------CHHHH
Confidence 44567899999999998887764 332 455666766322111001 14556
Q ss_pred HHHhCCCCCCCCcEEEEE-c-cCcc-ccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEe
Q 007212 392 QAEVGLPVDRNIPVIGFI-G-RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVA 464 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~i-G-rl~~-~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~ 464 (612)
+++++++.+ .++|+++ | |..+ .|++..+++|++.+.+ +++++++.+.... ..+.++++...+ +..+..+.
T Consensus 182 r~~lgl~~~--~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~~ 258 (385)
T TIGR00215 182 REKLGIDHN--GETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLID 258 (385)
T ss_pred HHHcCCCCC--CCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEEC
Confidence 778888754 3666655 3 7766 7999999999999865 5788877654321 233444444433 22343332
Q ss_pred ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC-CCCccc----------------ceecCcceEEecc
Q 007212 465 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVD----------------TVEEGFTGFQMGS 527 (612)
Q Consensus 465 ~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e----------------~v~~g~~G~~~~~ 527 (612)
. ....+|++||++|.+| |.+.+|+|++|+|+|+.. ++.+.- ++.+. +. +++
T Consensus 259 ---~-~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~--~~-~pe 326 (385)
T TIGR00215 259 ---G-DARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANR--LL-VPE 326 (385)
T ss_pred ---c-hHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCC--cc-chh
Confidence 2 2346999999999999 788889999999998872 222221 12211 11 111
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHh
Q 007212 528 FSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+ +-+..+++.+++.+.+++++
T Consensus 327 l-----~q~~~~~~~l~~~~~~ll~~ 347 (385)
T TIGR00215 327 L-----LQEECTPHPLAIALLLLLEN 347 (385)
T ss_pred h-----cCCCCCHHHHHHHHHHHhcC
Confidence 1 11445789999999999987
No 98
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.49 E-value=1.3e-12 Score=144.39 Aligned_cols=162 Identities=13% Similarity=0.079 Sum_probs=133.4
Q ss_pred cEEEEEc--cCccccCHHHHHHHHHhccc--CCeEEEEEecCCh-hHHHHHHHHHHHC--C-------------------
Q 007212 404 PVIGFIG--RLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-PMEKQLEQLEILY--P------------------- 457 (612)
Q Consensus 404 ~~i~~iG--rl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~-~~~~~l~~l~~~~--~------------------- 457 (612)
..+++++ || +.|.++.+|+|+.++.. |+++|.+.|.+.. .+.+.++++..++ .
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPI 398 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhc
Confidence 4788888 99 99999999999999954 8999999998863 3444554443322 1
Q ss_pred ----------CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecc
Q 007212 458 ----------EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 527 (612)
Q Consensus 458 ----------~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~ 527 (612)
..+.+.+..+...+...+..+.++|.+|..|+++ .++||+++|+|+| .-|..++|.++.||+++
T Consensus 399 ~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li-- 472 (519)
T TIGR03713 399 LQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII-- 472 (519)
T ss_pred ccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe--
Confidence 2344444345546668999999999999999999 9999999999999 44569999999999975
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHH
Q 007212 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETL 584 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y 584 (612)
+|..+|+++|..+|.+ .+.+.++...++ .++||-+.+.++|.+++
T Consensus 473 ----------~d~~~l~~al~~~L~~--~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 473 ----------DDISELLKALDYYLDN--LKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred ----------CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 8999999999999998 788888888884 69999999999998863
No 99
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.48 E-value=5.2e-12 Score=136.00 Aligned_cols=295 Identities=15% Similarity=0.124 Sum_probs=200.9
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|-.||+|..++|.+++.+. .+.++-|.+|-..+.. +.|..+ | ...
T Consensus 125 D-~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHiPFPs~----eifr~L--P--------------------~r~ 171 (474)
T PRK10117 125 D-IIWIHDYHLLPFASELRKRG------VNNRIGFFLHIPFPTP----EIFNAL--P--------------------PHD 171 (474)
T ss_pred C-EEEEeccHhhHHHHHHHHhC------CCCcEEEEEeCCCCCh----HHHhhC--C--------------------ChH
Confidence 6 59999999999999999875 6889999999543311 111111 1 113
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCc--CCCccch---hhh---hccCeEEeeCCccCCCcCCCcccccccccCcchhh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD---NII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVM 381 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~G~~~~---~~~---~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~ 381 (612)
.+-.++..+|.|-+.+..+++.+.+.. ..|.+.. .+. +..++.+.|-|||++.|......
T Consensus 172 eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~------------ 239 (474)
T PRK10117 172 ELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG------------ 239 (474)
T ss_pred HHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc------------
Confidence 345678899999999999998877521 1122110 000 22367888999998877432110
Q ss_pred hccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC-------hhHHHH
Q 007212 382 DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK-------KPMEKQ 448 (612)
Q Consensus 382 ~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~-------~~~~~~ 448 (612)
. .......+++.++ ++.+|+-+.|++..||+..=++|++.+.+ .++.|+-+.... .++..+
T Consensus 240 ~-~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~ 313 (474)
T PRK10117 240 P-LPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQ 313 (474)
T ss_pred h-HHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHH
Confidence 0 0111344566554 34699999999999999999999999875 367788776543 245556
Q ss_pred HHHHHHH----CCC----ceEEE-eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC-----ceEEcCCCCccc
Q 007212 449 LEQLEIL----YPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGLVD 514 (612)
Q Consensus 449 l~~l~~~----~~~----~v~~~-~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~~e 514 (612)
++++..+ ++. -+.+. -.++.+++..+|..||++++++..+|+.++..|+.+|-. +.|.|...|..+
T Consensus 314 v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~ 393 (474)
T PRK10117 314 LETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAAN 393 (474)
T ss_pred HHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccchHH
Confidence 6655544 321 12211 124667777899999999999999999999999999965 378888877777
Q ss_pred ceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhcCcHHHHHHHHHHHHHHH
Q 007212 515 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 515 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
.+.+ .++ |+|.|.++++++|.++|+.+..+...++.... ....++-..-++.+++-+..+.
T Consensus 394 ~L~~---All----------VNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 394 ELTS---ALI----------VNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred HhCC---CeE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 7642 454 59999999999999999996444444443322 4566777777777777666554
No 100
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.47 E-value=1.1e-11 Score=135.11 Aligned_cols=295 Identities=18% Similarity=0.215 Sum_probs=168.5
Q ss_pred CcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh
Q 007212 229 KNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 308 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (612)
-| +|..||+|..++|.+++... +++++.|.+|...+.. +.|..+ ...
T Consensus 142 ~D-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiPFPs~----e~fr~l----------------------P~r 188 (474)
T PF00982_consen 142 GD-LVWVHDYHLMLLPQMLRERG------PDARIGFFLHIPFPSS----EIFRCL----------------------PWR 188 (474)
T ss_dssp T--EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S----H----HHHTTS----------------------TTH
T ss_pred CC-EEEEeCCcHHHHHHHHHhhc------CCceEeeEEecCCCCH----HHHhhC----------------------CcH
Confidence 36 59999999999999999875 6899999999543311 111111 122
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCc--CCCccchhh---h----hccCeEEeeCCccCCCcCCCcccccccccCcch
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDNI---I----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~G~~~~~~---~----~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
..+-.++..||.|-+.+..+++.+.+.. ..|.+...- + +...+.+.|-|||++.+......
T Consensus 189 ~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr~v~v~~~pigId~~~~~~~~~~---------- 258 (474)
T PF00982_consen 189 EEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGRRVRVGVFPIGIDPDAFAQLARS---------- 258 (474)
T ss_dssp HHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTEEEEEEE------HHHHHHHHH-----------
T ss_pred HHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCEEEEEEEeeccCChHHHHhhccC----------
Confidence 3455678899999999999998876421 222221110 0 12357778888888766321100
Q ss_pred hhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC----h---hHH
Q 007212 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---PME 446 (612)
Q Consensus 380 ~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~----~---~~~ 446 (612)
..-......++++++- +..+|+-+.|++..||+..=++|++++.+ .++.|+-++... + ++.
T Consensus 259 --~~v~~~~~~l~~~~~~----~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~ 332 (474)
T PF00982_consen 259 --PEVQERAEELREKFKG----KRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELR 332 (474)
T ss_dssp --S---HHHHHHHHHTTT-----SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHH
T ss_pred --hHHHHHHHHHHHhcCC----CcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHH
Confidence 0011123456666641 24799999999999999999999999865 368888777532 1 344
Q ss_pred HHHHHHHH----HCCC----ceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc----eEEcCCCCcc
Q 007212 447 KQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLV 513 (612)
Q Consensus 447 ~~l~~l~~----~~~~----~v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~ 513 (612)
.+++++.. +++. -|.++. .++.++...+|..||+++++|..+|+.++..|+.+|... +|.|...|..
T Consensus 333 ~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa 412 (474)
T PF00982_consen 333 REVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAA 412 (474)
T ss_dssp HHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGG
T ss_pred HHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHH
Confidence 45554443 3431 133333 356677778999999999999999999999999998665 7888888888
Q ss_pred cceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhcCcHHHHHHHHHHH
Q 007212 514 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 514 e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~~y 584 (612)
+.+.++ .++ |+|.|++++|++|.++|+.+..++..++.+.. ....++-..-++.+++-+
T Consensus 413 ~~L~~~--al~----------VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 413 EQLSEA--ALL----------VNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp GT-TTS---EE----------E-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred HHcCCc--cEE----------ECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHh
Confidence 877653 254 49999999999999999985333333332222 345566665555555543
No 101
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=99.40 E-value=1e-11 Score=138.06 Aligned_cols=433 Identities=20% Similarity=0.226 Sum_probs=273.6
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEecCCc-cc-------------cccC--------------ccEEEEEEeCC-eee
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK-------------DAWD--------------TDVVIELKVGD-KIE 150 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~-~~-------------~~~~--------------~~~~~~~~~~~-~~~ 150 (612)
.||+|...+.....++..|...+.++-+|.+ +. +.|. ....+.+...+ +..
T Consensus 114 gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~~~~~ 193 (750)
T COG0058 114 GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYDNRVV 193 (750)
T ss_pred cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEeccCcEE
Confidence 4999999999999999999998888877642 22 1121 11223444445 667
Q ss_pred EEEEEEeeecCceEEEEeCccccccccCC-CCCcccCCCCCCCCchhhHHH---HHHHHHHHHHhhhhc-cCCCCccCCC
Q 007212 151 KVRFFHCHKRGVDRVFVDHPWFLAKVWGK-TQSKIYGPRTGEDYQDNQLRF---SLLCQAALEAPRILN-LNSNKYFSGP 225 (612)
Q Consensus 151 ~~~~~~~~~~gv~~~~v~~~~~~~~~~g~-~~~~~y~~~~g~~~~~~~~r~---~~~~~~~~~~~~~l~-~~~~~~~~~~ 225 (612)
.+|.|......+++++.+...--.+.|.+ --..+|++.+ +.+|+ .+++.+.++.+..+. .. ..
T Consensus 194 ~lrlW~a~~~~~~~~l~~~n~~e~~~~~~~iT~~LYp~Ds------~elRl~Qeyfl~~agvq~I~~~~~~~------~~ 261 (750)
T COG0058 194 TLRLWQAQVGRVPLYLLDFNVGENKNDARNITRVLYPGDS------KELRLKQEYFLGSAGVQDILARGHLE------HH 261 (750)
T ss_pred EEEEEEEecCccceEeecCCCcccchhhhhHHhhcCCCCc------HHHHHhhhheeeeHHHHHHHHHhhhc------cc
Confidence 77888877777788877544311111111 1125676432 22332 456777777776662 11 00
Q ss_pred CCCCcEEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCccc--ccCcccccccC-----CCc---
Q 007212 226 YGKKNVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLN-----LPA--- 287 (612)
Q Consensus 226 ~~~pDvVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~-----l~~--- 287 (612)
--+ ..+.|.||-|.+++..-+-+ +.-..|+ ....-++||.|.+.+.+ .|+...+..+- +-.
T Consensus 262 ~~~-~~~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~in 340 (750)
T COG0058 262 DLD-VLADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEIN 340 (750)
T ss_pred ccc-chhhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHHH
Confidence 001 33578999888877665444 2222222 12346899999887755 35544443211 000
Q ss_pred -ccccccccccCC-----CCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCc---CCCccchhhhhccCeEEeeCCc
Q 007212 288 -QFKSSFDFIDGY-----NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIVNGM 358 (612)
Q Consensus 288 -~~~~~~~~~~~~-----~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~---~~G~~~~~~~~~~~i~vI~ngv 358 (612)
.+.......... ..+.. .+++--.++..|..+..||+-+.+.+.+.. .+++. +.+|.-+.|||
T Consensus 341 ~~~l~~~~~~~~~~~~~~~~~i~--~v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~------p~~i~nvTNGI 412 (750)
T COG0058 341 ARFLPEVRLLYLGDLIRRGSPIE--EVNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLY------PEKINNVTNGI 412 (750)
T ss_pred hhhhHHHHhhccccccccCCccc--ceehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccC------ccccccccCCc
Confidence 000000000000 00000 044555577888899999998887765432 22222 34889999999
Q ss_pred cCCCcCCCcccccccccCcc--------------------------hhhhccHHHHHH----HHHHhCCCCCCCCcEEEE
Q 007212 359 DVQEWNPLTDKYIGVKYDAS--------------------------TVMDAKPLLKEA----LQAEVGLPVDRNIPVIGF 408 (612)
Q Consensus 359 d~~~~~p~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~----l~~~~gl~~~~~~~~i~~ 408 (612)
.+..|.-...+.+...++.. .+...|..++.. ...+.|+..+++...+++
T Consensus 413 t~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~ 492 (750)
T COG0058 413 TPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQ 492 (750)
T ss_pred CCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeee
Confidence 99998655444454445444 223445555543 345667888888999999
Q ss_pred EccCccccCHHHHHHHHHhccc-------CCeEEEEEecCC------hhHHHHHHHHHHHCC--CceEEEeccChHHHHH
Q 007212 409 IGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTGK------KPMEKQLEQLEILYP--EKARGVAKFNIPLAHM 473 (612)
Q Consensus 409 iGrl~~~Kg~d~li~A~~~l~~-------~~~~lvivG~g~------~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~ 473 (612)
+-|+.++|...+.+.-+..+.+ +.+++++.|... +.+.+.+...+...+ .+|.|+..++...+..
T Consensus 493 ~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA~~ 572 (750)
T COG0058 493 ARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLAEL 572 (750)
T ss_pred ehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHHHh
Confidence 9999999988877655554432 468888888754 355666666666532 4789999999999999
Q ss_pred HHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCccccee--cCcceEEeccccccccc-----CCCC-CHHHH
Q 007212 474 IIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEA-----VDPV-DVAAV 543 (612)
Q Consensus 474 i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~~~~~~~~~~~~-----v~~~-d~~~l 543 (612)
++.+||+....|+ .|++|.+-+-+|..|.+-|+|-.|...|+.+ .+.|||+||....+.+. .++. +...+
T Consensus 573 iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~~~~~~~y~~~ 652 (750)
T COG0058 573 LIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADGYDPNALYYEL 652 (750)
T ss_pred hcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcccccHHHHHHH
Confidence 9999999999997 4999999999999999999999999999997 78999999965532211 1222 44455
Q ss_pred HHHHHHHHHh
Q 007212 544 STTVRRALAT 553 (612)
Q Consensus 544 a~~i~~ll~~ 553 (612)
...|..++..
T Consensus 653 ~~~v~~~~~~ 662 (750)
T COG0058 653 ENEVKPVLDE 662 (750)
T ss_pred hHHHHHHHHH
Confidence 5566666654
No 102
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.38 E-value=2.6e-12 Score=120.90 Aligned_cols=176 Identities=22% Similarity=0.276 Sum_probs=92.7
Q ss_pred EEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007212 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (612)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (612)
|+++..++ |. .||.+.++.+|+++|+++||+|+++++......... . .. ..
T Consensus 1 ili~~~~~-~~--~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~----~-----------~~-----------~~ 51 (177)
T PF13439_consen 1 ILITNIFL-PN--IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE----L-----------VK-----------IF 51 (177)
T ss_dssp -EEECC-T-TS--SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST----E-----------EE-----------E-
T ss_pred CEEEEecC-CC--CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh----c-----------cc-----------ee
Confidence 45566554 43 899999999999999999999999998754322210 0 00 00
Q ss_pred EeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHHH
Q 007212 167 VDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCY 246 (612)
Q Consensus 167 v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~ 246 (612)
... .+. ......+.......+.+.++.. +||+ ||+|.+........
T Consensus 52 ~~~--------------~~~------~~~~~~~~~~~~~~~~~~i~~~-------------~~Di-Vh~~~~~~~~~~~~ 97 (177)
T PF13439_consen 52 VKI--------------PYP------IRKRFLRSFFFMRRLRRLIKKE-------------KPDI-VHIHGPPAFWIALL 97 (177)
T ss_dssp --T--------------T-S------STSS--HHHHHHHHHHHHHHHH-------------T-SE-EECCTTHCCCHHHH
T ss_pred eee--------------ecc------cccccchhHHHHHHHHHHHHHc-------------CCCe-EEecccchhHHHHH
Confidence 000 000 0111112223334455555554 3796 79998666554443
Q ss_pred HHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecCH
Q 007212 247 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 326 (612)
Q Consensus 247 l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~ 326 (612)
... ++|+++++|+......+ ........ ......+++...+.+|.++++|+
T Consensus 98 ~~~---------~~~~v~~~H~~~~~~~~-------~~~~~~~~-------------~~~~~~~~~~~~~~~~~ii~vS~ 148 (177)
T PF13439_consen 98 ACR---------KVPIVYTIHGPYFERRF-------LKSKLSPY-------------SYLNFRIERKLYKKADRIIAVSE 148 (177)
T ss_dssp HHH---------CSCEEEEE-HHH--HHT-------TTTSCCCH-------------HHHHHCTTHHHHCCSSEEEESSH
T ss_pred hcc---------CCCEEEEeCCCcccccc-------cccccchh-------------hhhhhhhhhhHHhcCCEEEEECH
Confidence 331 67999999975531000 00000000 00011223444788999999999
Q ss_pred HHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCc
Q 007212 327 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 363 (612)
Q Consensus 327 ~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~ 363 (612)
..++.+.+ +|++.+ ++.+||||+|.+.|
T Consensus 149 ~~~~~l~~---~~~~~~------ki~vI~ngid~~~F 176 (177)
T PF13439_consen 149 STKDELIK---FGIPPE------KIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHHHHH---HT--SS-------EEE----B-CCCH
T ss_pred HHHHHHHH---hCCccc------CCEEEECCccHHHc
Confidence 99999996 666544 99999999999877
No 103
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.34 E-value=1.6e-10 Score=134.04 Aligned_cols=298 Identities=14% Similarity=0.158 Sum_probs=197.2
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++.+. ++.++-|.+|-..+.. ..|..+ | ...
T Consensus 203 d-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHiPFPs~----eifr~L--P--------------------~r~ 249 (854)
T PLN02205 203 D-FVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHSPFPSS----EIYKTL--P--------------------IRE 249 (854)
T ss_pred C-EEEEeCchhhHHHHHHHhhC------CCCcEEEEecCCCCCh----HHHhhC--C--------------------cHH
Confidence 7 59999999999999999874 6889999999543311 111111 1 123
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCc--CCCccchh-----hh----hccCeEEeeCCccCCCcCCCcccccccccCcc
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDN-----II----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 378 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~G~~~~~-----~~----~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~ 378 (612)
-+-.++..||.|-+.+..+++.+.+.. ..|.+.+. -+ +..+|.+.|-|||+..|......
T Consensus 250 eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~--------- 320 (854)
T PLN02205 250 ELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL--------- 320 (854)
T ss_pred HHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC---------
Confidence 345678899999999999999877621 12322111 00 23467888999998776432110
Q ss_pred hhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEEEEEecCC-------hhH
Q 007212 379 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KPM 445 (612)
Q Consensus 379 ~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~lvivG~g~-------~~~ 445 (612)
........+++++++- +++.+|+-+.|++..||+..=+.|++++.+ | ++.|+-+.... .++
T Consensus 321 ---~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~ 394 (854)
T PLN02205 321 ---PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEV 394 (854)
T ss_pred ---hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHH
Confidence 0001113345666542 245799999999999999999999999865 3 66777776532 234
Q ss_pred HHHHHHHHH----HCCC----ceEEE-eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC--------------
Q 007212 446 EKQLEQLEI----LYPE----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-------------- 502 (612)
Q Consensus 446 ~~~l~~l~~----~~~~----~v~~~-~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~-------------- 502 (612)
..++++++. +++. -|.+. -.++.+++..+|+.||++++++..+|+.++..|+.+|..
T Consensus 395 ~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~ 474 (854)
T PLN02205 395 QAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPS 474 (854)
T ss_pred HHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccc
Confidence 444455544 3431 13333 234667777899999999999999999999999998853
Q ss_pred -----ceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhcCcHHH
Q 007212 503 -----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGP 576 (612)
Q Consensus 503 -----PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~ 576 (612)
+.|.|..-|....+. ..+ +|+|.|+++++++|.++|+.+..++..++.+.. ....++-..-
T Consensus 475 ~~~~gvLiLSEfaGaa~~L~---~Ai----------~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W 541 (854)
T PLN02205 475 TPKKSMLVVSEFIGCSPSLS---GAI----------RVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYW 541 (854)
T ss_pred cCCCCceEeeeccchhHHhC---cCe----------EECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHH
Confidence 356666655555442 134 359999999999999999986444444443322 3456676666
Q ss_pred HHHHHHHHHHHH
Q 007212 577 AKKWEETLLNLE 588 (612)
Q Consensus 577 a~~~~~~y~~l~ 588 (612)
++.+++-++++.
T Consensus 542 ~~~fl~~l~~~~ 553 (854)
T PLN02205 542 ARSFLQDLERTC 553 (854)
T ss_pred HHHHHHHHHHHH
Confidence 777776666553
No 104
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.33 E-value=4.7e-12 Score=117.06 Aligned_cols=160 Identities=22% Similarity=0.227 Sum_probs=85.5
Q ss_pred ccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeCccccccccCCC
Q 007212 101 GGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT 180 (612)
Q Consensus 101 GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~ 180 (612)
||++.++.+|+++|+++||+|+|+++..+...+. ....|++++.+..+.....
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~----- 53 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPWP----- 53 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSSG-----
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccchh-----
Confidence 8999999999999999999999999875433221 1234666666643321100
Q ss_pred CCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCc
Q 007212 181 QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSA 260 (612)
Q Consensus 181 ~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~ 260 (612)
+. ..+ +......++.... .+||+ ||+|++..+++...++.. .++
T Consensus 54 ---~~-----------~~~---~~~~~~~~l~~~~-----------~~~Dv-v~~~~~~~~~~~~~~~~~-------~~~ 97 (160)
T PF13579_consen 54 ---LR-----------LLR---FLRRLRRLLAARR-----------ERPDV-VHAHSPTAGLVAALARRR-------RGI 97 (160)
T ss_dssp ---GG-----------HCC---HHHHHHHHCHHCT--------------SE-EEEEHHHHHHHHHHHHHH-------HT-
T ss_pred ---hh-----------hHH---HHHHHHHHHhhhc-----------cCCeE-EEecccchhHHHHHHHHc-------cCC
Confidence 00 001 1122222331111 35895 899987766666666533 489
Q ss_pred eEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCc
Q 007212 261 KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGV 340 (612)
Q Consensus 261 pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~ 340 (612)
|+|+++|+....... .+... ....+++..++.+|.++++|+..++.+.+ +|+
T Consensus 98 p~v~~~h~~~~~~~~--------~~~~~-----------------~~~~~~~~~~~~ad~vi~~S~~~~~~l~~---~g~ 149 (160)
T PF13579_consen 98 PLVVTVHGTLFRRGS--------RWKRR-----------------LYRWLERRLLRRADRVIVVSEAMRRYLRR---YGV 149 (160)
T ss_dssp -EEEE-SS-T--------------HHHH-----------------HHHHHHHHHHHH-SEEEESSHHHHHHHHH---H--
T ss_pred cEEEEECCCchhhcc--------chhhH-----------------HHHHHHHHHHhcCCEEEECCHHHHHHHHH---hCC
Confidence 999999964431110 00000 11234577899999999999999999997 777
Q ss_pred cchhhhhccCeEEeeCC
Q 007212 341 ELDNIIRKTGIKGIVNG 357 (612)
Q Consensus 341 ~~~~~~~~~~i~vI~ng 357 (612)
+.+ ++.+||||
T Consensus 150 ~~~------ri~vipnG 160 (160)
T PF13579_consen 150 PPD------RIHVIPNG 160 (160)
T ss_dssp -GG------GEEE----
T ss_pred CCC------cEEEeCcC
Confidence 766 99999998
No 105
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.32 E-value=7.9e-10 Score=118.73 Aligned_cols=294 Identities=19% Similarity=0.215 Sum_probs=193.1
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++.+. .+.++.|.+|-..+.. +.+..+- ...
T Consensus 149 D-iIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHiPfPss----Evfr~lP----------------------~r~ 195 (486)
T COG0380 149 D-IIWVHDYHLLLVPQMLRERI------PDAKIGFFLHIPFPSS----EVFRCLP----------------------WRE 195 (486)
T ss_pred C-EEEEEechhhhhHHHHHHhC------CCceEEEEEeCCCCCH----HHHhhCc----------------------hHH
Confidence 7 59999999999999999875 6889999999543311 1111110 112
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcC--CC------ccchhh-hhccCeEEeeCCccCCCcCCCcccccccccCcchh
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGED--KG------VELDNI-IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 380 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~--~G------~~~~~~-~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~ 380 (612)
-+-.++..||.|-+.++.+++.+.+... .| +..... =+..++..+|-|+|+..|.-.... +.
T Consensus 196 eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~~~v~v~a~PIgID~~~~~~~~~~-------~~-- 266 (486)
T COG0380 196 EILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADGRIVKVGAFPIGIDPEEFERALKS-------PS-- 266 (486)
T ss_pred HHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCCceEEEEEEeeecCHHHHHHhhcC-------Cc--
Confidence 2345788999999999999988765321 11 111100 011367788999998877533210 00
Q ss_pred hhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC----h---hHHH
Q 007212 381 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----K---PMEK 447 (612)
Q Consensus 381 ~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~----~---~~~~ 447 (612)
-.....++++.++- ++.+|+.+.|++.-||+..=+.|+++|.. .++.++-++... . .+..
T Consensus 267 ---v~~~~~el~~~~~~----~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~ 339 (486)
T COG0380 267 ---VQEKVLELKAELGR----NKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRL 339 (486)
T ss_pred ---hhhHHHHHHHHhcC----CceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCceEEEEecCCCccccHHHHHHHH
Confidence 00113445555542 35799999999999999999999999975 367788777754 2 2444
Q ss_pred HHHHHHH----HCCC----ceEEEe-ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHc----CCceEEcCCCCccc
Q 007212 448 QLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY----GTVPIVASTGGLVD 514 (612)
Q Consensus 448 ~l~~l~~----~~~~----~v~~~~-~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~----G~PvI~s~~gg~~e 514 (612)
+++++.. +++. -+.++- ..+.+++..++..||++++++..||+.++..|+-+| +-|.|.|...|...
T Consensus 340 ~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~ 419 (486)
T COG0380 340 QIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAAS 419 (486)
T ss_pred HHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHHHHhhcCCCCcEEEeccccchh
Confidence 5555444 3331 122222 246677778999999999999999999999999987 34677887766666
Q ss_pred ceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhhcCcHHHHHHHHHHHH
Q 007212 515 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 515 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~-~~~~fsw~~~a~~~~~~y~ 585 (612)
.+.+ .++ |+|.|.++++++|.++|+.+..+..+++.... ....++-..-+..+++-+.
T Consensus 420 ~L~~---Ali----------VNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~~d~~~W~~~fl~~la 478 (486)
T COG0380 420 ELRD---ALI----------VNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLTHDVARWANSFLDDLA 478 (486)
T ss_pred hhcc---CEe----------ECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 6654 454 49999999999999999985333333332222 2344565555555555444
No 106
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.19 E-value=4.4e-08 Score=103.94 Aligned_cols=168 Identities=16% Similarity=0.160 Sum_probs=95.8
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCH-HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccC
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGS-DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~-d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 467 (612)
+..++.+++..+ +++|+.+|.=.-.+.+ +.+.+++..+. .+++++++- |...+++.+.. .+ ++.. ..|.
T Consensus 173 ~~~~~~~~l~~~--~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~-G~~~~~~~~~~----~~-~~~~-~~f~ 242 (352)
T PRK12446 173 EKGLAFLGFSRK--KPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLC-GKGNLDDSLQN----KE-GYRQ-FEYV 242 (352)
T ss_pred hHHHHhcCCCCC--CcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEe-CCchHHHHHhh----cC-CcEE-ecch
Confidence 344566777643 4667666654334445 44445555553 347766542 22224443332 12 1222 2444
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC-----C----cccceecCcceEEecccccccccCCCC
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-----G----LVDTVEEGFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-----g----~~e~v~~g~~G~~~~~~~~~~~~v~~~ 538 (612)
.+.++.+|+.||++|.- +-++++.|++++|+|.|.-... + ..+.+.+...+..+ .-+.-
T Consensus 243 ~~~m~~~~~~adlvIsr----~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l--------~~~~~ 310 (352)
T PRK12446 243 HGELPDILAITDFVISR----AGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVL--------YEEDV 310 (352)
T ss_pred hhhHHHHHHhCCEEEEC----CChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEc--------chhcC
Confidence 45566899999999943 3478899999999999977542 1 11233343445543 11233
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 539 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 539 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+++.+.+++.+++++ ++.+++ ..+.+.....+++..+++.
T Consensus 311 ~~~~l~~~l~~ll~~--~~~~~~-----~~~~~~~~~aa~~i~~~i~ 350 (352)
T PRK12446 311 TVNSLIKHVEELSHN--NEKYKT-----ALKKYNGKEAIQTIIDHIS 350 (352)
T ss_pred CHHHHHHHHHHHHcC--HHHHHH-----HHHHcCCCCHHHHHHHHHH
Confidence 678999999999877 444432 2233555566666655543
No 107
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=99.15 E-value=2e-09 Score=121.06 Aligned_cols=294 Identities=16% Similarity=0.187 Sum_probs=190.2
Q ss_pred CCcEEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCccc--ccCcccccccCCCcccc--ccc--
Q 007212 228 KKNVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQFK--SSF-- 293 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~~~~~--~~~-- 293 (612)
++. +||.||-|++++..-+-+ +.-..|+ ....-++||-|++.+.+ .|+...+..+- |..+. ...
T Consensus 302 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~L-pr~~~ii~~in~ 379 (798)
T PRK14985 302 DYE-VIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLL-PRHMQIIKEINT 379 (798)
T ss_pred CCc-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHh-HHHHHHHHHHHH
Confidence 556 599999888876665443 3221121 12456899999887655 35554443221 11100 000
Q ss_pred ccc----cCCCC---------CcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccC
Q 007212 294 DFI----DGYNK---------PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV 360 (612)
Q Consensus 294 ~~~----~~~~~---------~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~ 360 (612)
.|. ..+.. .+....+++-..++..|..|-.||.-+.+.+.+.-..... .+ -+.++.-|.|||..
T Consensus 380 ~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~--~l-~p~kf~nvTNGVt~ 456 (798)
T PRK14985 380 RFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYH--QL-WPNKFHNVTNGITP 456 (798)
T ss_pred HHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhH--hh-CCCccCCcCCCcCc
Confidence 000 00000 0011235566667778888888888777654431110000 00 02377789999999
Q ss_pred CCcC----CCcc----cccc-------------cccCc-ch----hhhccHHHHHHH----HHHhCCCCCCCCcEEEEEc
Q 007212 361 QEWN----PLTD----KYIG-------------VKYDA-ST----VMDAKPLLKEAL----QAEVGLPVDRNIPVIGFIG 410 (612)
Q Consensus 361 ~~~~----p~~~----~~~~-------------~~~~~-~~----~~~~~~~~~~~l----~~~~gl~~~~~~~~i~~iG 410 (612)
..|- |.-. .++. .+|.. .. +.+.+..+|..| +++.|+..+++...++++-
T Consensus 457 rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~k 536 (798)
T PRK14985 457 RRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIK 536 (798)
T ss_pred chhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHh
Confidence 9984 3211 1111 11222 12 245555555554 5677888888889999999
Q ss_pred cCccccCHHH-HHHHHHhccc----C-----CeEEEEEecCC------hhHHHHHHHHHHHC------CC--ceEEEecc
Q 007212 411 RLEEQKGSDI-LAAAIPHFIK----E-----NVQIIVLGTGK------KPMEKQLEQLEILY------PE--KARGVAKF 466 (612)
Q Consensus 411 rl~~~Kg~d~-li~A~~~l~~----~-----~~~lvivG~g~------~~~~~~l~~l~~~~------~~--~v~~~~~~ 466 (612)
|+.++|...+ ++..+..+.+ + +.++++.|... +.+.+.+..++... .+ +|.|+..|
T Consensus 537 R~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY 616 (798)
T PRK14985 537 RLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDY 616 (798)
T ss_pred hhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCC
Confidence 9999999988 6666554432 2 48899999854 34555666666432 22 79999999
Q ss_pred ChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEec
Q 007212 467 NIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~ 526 (612)
+...+..++.+||+....|+ .|++|..=+-+|..|.+.+.+-.|...|+.++ +.|||.||
T Consensus 617 ~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 617 CVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred ChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeC
Confidence 99999999999999999998 49999999999999999999999999999886 78999996
No 108
>PRK14986 glycogen phosphorylase; Provisional
Probab=99.14 E-value=3.6e-09 Score=119.44 Aligned_cols=295 Identities=18% Similarity=0.208 Sum_probs=193.7
Q ss_pred cEEEEeCCCcccchHHHHHhh-hcCCCC-------cCCceEEEEEecCCccc--ccCcccccccCCC---------cccc
Q 007212 230 NVVFVANDWHTSLIPCYLKTM-YKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLP---------AQFK 290 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~-~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~---------~~~~ 290 (612)
.++||.||-|.+++...+-+. ....|+ ....-++||-|++.+.+ .|+.+.+..+--. .++.
T Consensus 314 ~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~fl 393 (815)
T PRK14986 314 KIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFL 393 (815)
T ss_pred ccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHHH
Confidence 346999999988776655432 211121 13457899999987655 3555544332110 1111
Q ss_pred cccc--ccc-----CCC---CCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccC
Q 007212 291 SSFD--FID-----GYN---KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV 360 (612)
Q Consensus 291 ~~~~--~~~-----~~~---~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~ 360 (612)
..+. +.. +.. ..-.+..+++-..++..|..|..||.-+.+.+.+.-... ... +-+.++.-|.|||..
T Consensus 394 ~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~d--f~~-l~P~kf~niTNGV~~ 470 (815)
T PRK14986 394 KTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFAD--FAK-IFPGRFCNVTNGVTP 470 (815)
T ss_pred HHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHH--HHh-hCCCcccccCCCCCh
Confidence 0000 000 000 000012456667788889999999998877653311000 000 112366779999999
Q ss_pred CCcC----CCccc----cccccc---------------Cc---chhhhccHHHHHHH----HHHhCCCCCCCCcEEEEEc
Q 007212 361 QEWN----PLTDK----YIGVKY---------------DA---STVMDAKPLLKEAL----QAEVGLPVDRNIPVIGFIG 410 (612)
Q Consensus 361 ~~~~----p~~~~----~~~~~~---------------~~---~~~~~~~~~~~~~l----~~~~gl~~~~~~~~i~~iG 410 (612)
..|- |.-.. ++...+ ++ ..+.+.+..+|..| +++.|...+++...++++-
T Consensus 471 rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qak 550 (815)
T PRK14986 471 RRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIK 550 (815)
T ss_pred hhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeeeh
Confidence 8886 32111 111111 11 22445566666554 5577988888999999999
Q ss_pred cCccccCHHH-HHHHHHhc---cc-C-----CeEEEEEecCC------hhHHHHHHHHHH------HCCC--ceEEEecc
Q 007212 411 RLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGK------KPMEKQLEQLEI------LYPE--KARGVAKF 466 (612)
Q Consensus 411 rl~~~Kg~d~-li~A~~~l---~~-~-----~~~lvivG~g~------~~~~~~l~~l~~------~~~~--~v~~~~~~ 466 (612)
|+.++|...+ ++..+..+ ++ + +.++++.|... +.+.+.+.+++. ...+ +|.|+..|
T Consensus 551 R~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlenY 630 (815)
T PRK14986 551 RIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNY 630 (815)
T ss_pred hhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCCC
Confidence 9999999998 66665544 33 2 58899999854 355666666665 2333 79999999
Q ss_pred ChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEecc
Q 007212 467 NIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGS 527 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~ 527 (612)
+...+..++.+||+....|+ .|++|.+-+-+|..|.+.+.+-.|...|+.++ +.|||.||.
T Consensus 631 ~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG~ 695 (815)
T PRK14986 631 SVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFGN 695 (815)
T ss_pred CHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeCC
Confidence 99999999999999999998 49999999999999999999999999999986 789999973
No 109
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.12 E-value=2.5e-10 Score=96.64 Aligned_cols=89 Identities=22% Similarity=0.287 Sum_probs=79.6
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 559 (612)
+.+.|+..++++..++|+|+||+|+|+++.+++.+++.++.+++.+ .|++++.++|..++++ ++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~------------~~~~el~~~i~~ll~~--~~~~ 66 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITY------------NDPEELAEKIEYLLEN--PEER 66 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEE------------CCHHHHHHHHHHHHCC--HHHH
Confidence 4678898999999999999999999999999999999999888876 3999999999999998 7777
Q ss_pred HHHHHHH---HHhhcCcHHHHHHHHH
Q 007212 560 AEMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 560 ~~~~~~~---~~~~fsw~~~a~~~~~ 582 (612)
+++++++ +.++|||+..++++++
T Consensus 67 ~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 67 RRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 7777777 5789999999999864
No 110
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.11 E-value=2.6e-07 Score=97.46 Aligned_cols=342 Identities=17% Similarity=0.136 Sum_probs=185.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCe-EEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR-VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~-V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
|+|++... .+||--.....|+++|.++|++ |.++...+. .+ +... ...++.
T Consensus 1 ~~ivl~~g------GTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~~--~e-------------------~~l~-~~~~~~ 52 (357)
T COG0707 1 KKIVLTAG------GTGGHVFPALALAEELAKRGWEQVIVLGTGDG--LE-------------------AFLV-KQYGIE 52 (357)
T ss_pred CeEEEEeC------CCccchhHHHHHHHHHHhhCccEEEEeccccc--ce-------------------eeec-cccCce
Confidence 45666653 2788888888999999999996 555532211 00 1111 112666
Q ss_pred EEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccch
Q 007212 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~ 243 (612)
++.++...+..+ .+ +. +......+++...++.+.+.. .+||+|+-+..+.+ .-
T Consensus 53 ~~~I~~~~~~~~--------~~-------~~-~~~~~~~~~~~~~~a~~il~~----------~kPd~vig~Ggyvs-~P 105 (357)
T COG0707 53 FELIPSGGLRRK--------GS-------LK-LLKAPFKLLKGVLQARKILKK----------LKPDVVIGTGGYVS-GP 105 (357)
T ss_pred EEEEeccccccc--------Cc-------HH-HHHHHHHHHHHHHHHHHHHHH----------cCCCEEEecCCccc-cH
Confidence 777765443221 11 11 232223344444444444432 25998665554443 33
Q ss_pred HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEe
Q 007212 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~ 323 (612)
+.+.... .++|+++...|... |. .-+...+.++.|.+
T Consensus 106 ~~~Aa~~-------~~iPv~ihEqn~~~-G~-----------------------------------ank~~~~~a~~V~~ 142 (357)
T COG0707 106 VGIAAKL-------LGIPVIIHEQNAVP-GL-----------------------------------ANKILSKFAKKVAS 142 (357)
T ss_pred HHHHHHh-------CCCCEEEEecCCCc-ch-----------------------------------hHHHhHHhhceeee
Confidence 3333333 47898877766443 10 11234556777666
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
.-+. .. .+.+ +.++.++-|.+..+... .. ....+..... ++
T Consensus 143 ~f~~----~~----~~~~------~~~~~~tG~Pvr~~~~~-~~--------------------~~~~~~~~~~----~~ 183 (357)
T COG0707 143 AFPK----LE----AGVK------PENVVVTGIPVRPEFEE-LP--------------------AAEVRKDGRL----DK 183 (357)
T ss_pred cccc----cc----ccCC------CCceEEecCcccHHhhc-cc--------------------hhhhhhhccC----CC
Confidence 5443 11 1221 22567777777765543 11 1112222221 34
Q ss_pred cEEEEEcc-CccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 404 PVIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~i~~iGr-l~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
++|+.+|. ....+=-+.+.++...+. ++++++....... +++....+ .+.+. ..+..|..+ +..+|+.||++|
T Consensus 184 ~~ilV~GGS~Ga~~ln~~v~~~~~~l~-~~~~v~~~~G~~~-~~~~~~~~-~~~~~--~~v~~f~~d-m~~~~~~ADLvI 257 (357)
T COG0707 184 KTILVTGGSQGAKALNDLVPEALAKLA-NRIQVIHQTGKND-LEELKSAY-NELGV--VRVLPFIDD-MAALLAAADLVI 257 (357)
T ss_pred cEEEEECCcchhHHHHHHHHHHHHHhh-hCeEEEEEcCcch-HHHHHHHH-hhcCc--EEEeeHHhh-HHHHHHhccEEE
Confidence 66666665 444443333444444443 3677766553332 33333333 23332 344455555 557999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 552 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~ 552 (612)
. + +=++++-|..++|+|.|.-..+.- ...+.+...|.++ +.. .++.+.+.|.++++
T Consensus 258 s--R--aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i----------~~~~lt~~~l~~~i~~l~~ 323 (357)
T COG0707 258 S--R--AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVI----------RQSELTPEKLAELILRLLS 323 (357)
T ss_pred e--C--CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEe----------ccccCCHHHHHHHHHHHhc
Confidence 3 3 336899999999999987665332 2234444556655 444 48999999999999
Q ss_pred hhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
+ ++.+.+|..++ +.+.-...++++.++...+
T Consensus 324 ~--~~~l~~m~~~a--~~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 324 N--PEKLKAMAENA--KKLGKPDAAERIADLLLAL 354 (357)
T ss_pred C--HHHHHHHHHHH--HhcCCCCHHHHHHHHHHHH
Confidence 8 77888887775 3334444555555554443
No 111
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.09 E-value=3.2e-09 Score=114.85 Aligned_cols=171 Identities=8% Similarity=0.009 Sum_probs=130.6
Q ss_pred hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHh
Q 007212 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 395 (612)
.+.|.||+.++...+.+.+.... ..++.+||-|+=.. + +..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~---------~~~~~~ip~g~i~~-~-~~~---------------------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN---------EYQEQISQLGYLYP-F-KKD---------------------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc---------ccCceEEEEEEEEe-e-ccc----------------------------
Confidence 57899999998877777753211 12566677665421 1 110
Q ss_pred CCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007212 396 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 396 gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 473 (612)
++....++.++. +..|++++++.+ |+++|.| |.+. ++...|.++ .+++ ++..+..+..+.+.+
T Consensus 279 ----~r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~t-e~s~kL~~L-~~y~-nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 279 ----NKYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALT-EMSSKLMSL-DKYD-NVKLYPNITTQKIQE 343 (438)
T ss_pred ----cCCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecC-cccHHHHHH-HhcC-CcEEECCcChHHHHH
Confidence 112245666662 889999999866 8999999 7665 246788888 6674 577888888867779
Q ss_pred HHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
++..||+++-.|..|++++++.||+.+|+|+++-+. -|..+++.+ |.++ +.+|+++|+++|..++.
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~----------~~~~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIF----------EHNEVDQLISKLKDLLN 410 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Ccee----------cCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999985 455677766 6665 89999999999999999
Q ss_pred h
Q 007212 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 411 d 411 (438)
T TIGR02919 411 D 411 (438)
T ss_pred C
Confidence 8
No 112
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=99.08 E-value=4e-09 Score=118.81 Aligned_cols=292 Identities=21% Similarity=0.237 Sum_probs=194.5
Q ss_pred CCcEEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCccc--ccCccccccc---------CCCcc
Q 007212 228 KKNVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLL---------NLPAQ 288 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~---------~l~~~ 288 (612)
++. +||.||-|++++...+-+ +.-..|+ ....-++||-|++.+.+ .|+.+.+..+ ++..+
T Consensus 297 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~ 375 (794)
T TIGR02093 297 KKV-AIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRR 375 (794)
T ss_pred cce-EEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHH
Confidence 456 599999888876665443 2221121 13456899999887655 3555444321 11111
Q ss_pred cccccc--cccCCC-----CCc---CCchhHHHHHHHhhCCEEEecCHHHHHHHHcCc---CCCccchhhhhccCeEEee
Q 007212 289 FKSSFD--FIDGYN-----KPV---RGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIV 355 (612)
Q Consensus 289 ~~~~~~--~~~~~~-----~~~---~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~---~~G~~~~~~~~~~~i~vI~ 355 (612)
+..... +..... ..+ .++.+++-..++..|..|..||+-+.+.+.+.. .+..- +.++.-+.
T Consensus 376 fl~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l~------P~kf~n~T 449 (794)
T TIGR02093 376 FLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYELY------PEKFNNKT 449 (794)
T ss_pred HHHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhhC------CCccCCcC
Confidence 111000 000000 000 012467777788899999999998887776410 11111 13677899
Q ss_pred CCccCCCcCCCcc---cccccc------------------c-Cc----chhhhccHHHHHHH----HHHhCCCCCCCCcE
Q 007212 356 NGMDVQEWNPLTD---KYIGVK------------------Y-DA----STVMDAKPLLKEAL----QAEVGLPVDRNIPV 405 (612)
Q Consensus 356 ngvd~~~~~p~~~---~~~~~~------------------~-~~----~~~~~~~~~~~~~l----~~~~gl~~~~~~~~ 405 (612)
|||.+..|--... ..+..+ + +. ..+.+.|..+|..| ++..|...+++...
T Consensus 450 NGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slf 529 (794)
T TIGR02093 450 NGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIF 529 (794)
T ss_pred CCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccc
Confidence 9999988852111 111111 1 11 33455666666665 55778888888899
Q ss_pred EEEEccCccccCHHH-HHHHHHhc---cc-C-----CeEEEEEecCC------hhHHHHHHHHHHH------CCC--ceE
Q 007212 406 IGFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGK------KPMEKQLEQLEIL------YPE--KAR 461 (612)
Q Consensus 406 i~~iGrl~~~Kg~d~-li~A~~~l---~~-~-----~~~lvivG~g~------~~~~~~l~~l~~~------~~~--~v~ 461 (612)
++++-|+.++|...+ ++..+..+ ++ + +.++++.|... +...+.+..++.. ..+ +|.
T Consensus 530 dvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVV 609 (794)
T TIGR02093 530 DVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVV 609 (794)
T ss_pred hhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEE
Confidence 999999999999998 66665544 33 2 56899999754 3455666666643 223 799
Q ss_pred EEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEec
Q 007212 462 GVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 462 ~~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~ 526 (612)
|+..|+...+..++.+||+....|+ .|++|..=+-+|..|.+.+.+-.|...|+.++ +.|+|+||
T Consensus 610 FlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 610 FVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred EeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcC
Confidence 9999999999999999999999998 49999999999999999999999999999987 78999996
No 113
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.07 E-value=1.7e-08 Score=114.36 Aligned_cols=315 Identities=19% Similarity=0.220 Sum_probs=205.3
Q ss_pred HHHHHHHHHHh-hhhccCCCCccCCCCCCCcEEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCc
Q 007212 201 SLLCQAALEAP-RILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAY 271 (612)
Q Consensus 201 ~~~~~~~~~~~-~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~ 271 (612)
.+|+.+.++.+ +.+..... -+.+ +.++. +||.||-|++++...+-+ +.-..|+ ....-++||-|++.+
T Consensus 274 yfl~sag~qdilr~~~~~~~-~~~~-l~~~~-~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lp 350 (797)
T cd04300 274 YFFVSASLQDIIRRFKKTHG-PLSE-FPDKV-AIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLP 350 (797)
T ss_pred HHHhhhHHHHHHHHHHHhCC-Chhh-CCCce-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCch
Confidence 45666666664 55421111 1111 23556 599999888876665443 3211221 134568999998876
Q ss_pred cc--ccCcccccccCCCcccc------------------------cccccccCCCCCcCCchhHHHHHHHhhCCEEEecC
Q 007212 272 QG--RFAFEDFGLLNLPAQFK------------------------SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 272 ~~--~~~~~~~~~~~l~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS 325 (612)
.+ .|+.+.+..+- |..+. ..+.-++.- ..+.+++-..++..|..|..||
T Consensus 351 ealE~wp~~l~~~~l-pr~~~II~~In~~~~~~~~~~~~~~~~~~~~l~ii~~~----~~~~v~Ma~LAi~~S~~vNGVS 425 (797)
T cd04300 351 EALEKWPVDLFERLL-PRHLEIIYEINRRFLEEVRAKYPGDEDRIRRMSIIEEG----GEKQVRMAHLAIVGSHSVNGVA 425 (797)
T ss_pred HHhCccCHHHHHHHC-hHHHHHHHHHHHHHHHHHHHhcCCCHHHHHhhcccccC----CCCEEehHHHHHhcCcchhhhH
Confidence 55 35544443321 11110 000000100 1134667777888999999999
Q ss_pred HHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCccc---ccccc------------------c--Cc---ch
Q 007212 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDK---YIGVK------------------Y--DA---ST 379 (612)
Q Consensus 326 ~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~---~~~~~------------------~--~~---~~ 379 (612)
.-+.+.+++...... ..+. +.++.-+.|||....|--...+ .+..+ | |+ ..
T Consensus 426 ~lH~ei~k~~~~~df--~~l~-P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~ 502 (797)
T cd04300 426 ALHSELLKETVFKDF--YELY-PEKFNNKTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKE 502 (797)
T ss_pred HHHHHHHHHhhHHHH--HhhC-CCccCCcCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHH
Confidence 988887775310000 0011 1367789999999888521111 11111 1 11 33
Q ss_pred hhhccHHHHHHH----HHHhCCCCCCCCcEEEEEccCccccCHHH-HHHHHHh---ccc-C-----CeEEEEEecCC---
Q 007212 380 VMDAKPLLKEAL----QAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPH---FIK-E-----NVQIIVLGTGK--- 442 (612)
Q Consensus 380 ~~~~~~~~~~~l----~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~-li~A~~~---l~~-~-----~~~lvivG~g~--- 442 (612)
+.+.+..+|..| ++..|+..+++...++++-|+.++|...+ ++..+.. +++ + +.++++.|...
T Consensus 503 l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y 582 (797)
T cd04300 503 FRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGY 582 (797)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCc
Confidence 446666666665 55788888889999999999999999999 6666544 433 2 47888988754
Q ss_pred ---hhHHHHHHHHHHH------CCC--ceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCC
Q 007212 443 ---KPMEKQLEQLEIL------YPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 443 ---~~~~~~l~~l~~~------~~~--~v~~~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+...+.+..++.. ..+ +|.|+..|+...+..++.+||+....|+ .|++|..=+-+|..|.+.+.|-.
T Consensus 583 ~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlD 662 (797)
T cd04300 583 YMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLD 662 (797)
T ss_pred HHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeeccc
Confidence 3556666666653 223 7899999999999999999999999998 49999999999999999999999
Q ss_pred CCcccceec--CcceEEec
Q 007212 510 GGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 510 gg~~e~v~~--g~~G~~~~ 526 (612)
|...|+.++ +.|+|+||
T Consensus 663 GanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 663 GANVEIAEEVGEENIFIFG 681 (797)
T ss_pred chhHHHHHHhCcCcEEEeC
Confidence 999999987 78999997
No 114
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=98.96 E-value=3.5e-08 Score=110.18 Aligned_cols=288 Identities=19% Similarity=0.256 Sum_probs=168.6
Q ss_pred EEEEeCCCcccchHHHHHh-hhcCCCC-------cCCceEEEEEecCCccc--ccCcccccccCCCc----------ccc
Q 007212 231 VVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QFK 290 (612)
Q Consensus 231 vVi~~h~~~~~~~~~~l~~-~~~~~~~-------~~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~~----------~~~ 290 (612)
++||.||-|++++..-+-+ +....|+ ....-++||.|.+.+.+ +|+.+.+..+ +|. ++.
T Consensus 216 ~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~-Lpr~~~ii~ein~~f~ 294 (713)
T PF00343_consen 216 VVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERY-LPRHLEIIYEINRRFL 294 (713)
T ss_dssp EEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHH-SHHHHHHHHHHHHHHH
T ss_pred eEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHH-ChHHHHHHHHHhHHHH
Confidence 5699999998887665443 3333343 12346899999987765 3554443321 111 110
Q ss_pred c--------------ccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeC
Q 007212 291 S--------------SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356 (612)
Q Consensus 291 ~--------------~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~n 356 (612)
. .+..++. -....+++-..++..|..+-.||+-+.+.+.+...... .++ -+.++.-|.|
T Consensus 295 ~~~~~~~~~d~~~~~~l~ii~~----~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f--~~l-~P~kf~nvTN 367 (713)
T PF00343_consen 295 DELRRKYPGDEDQIRRLSIIEE----GNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDF--YEL-WPEKFGNVTN 367 (713)
T ss_dssp HHHHHHSTT-HHHHHHHSSEET----SSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHH--HHH-SGGGEEE---
T ss_pred HHHHHHhcCcchhhhhcccccc----cchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhh--hhc-CCceeecccc
Confidence 0 0000100 01235677788899999999999988887664211111 111 1237999999
Q ss_pred CccCCCcCCCcc--------ccccccc--Ccchh----------------hhccHHHHH----HHHHHhCCCCCCCCcEE
Q 007212 357 GMDVQEWNPLTD--------KYIGVKY--DASTV----------------MDAKPLLKE----ALQAEVGLPVDRNIPVI 406 (612)
Q Consensus 357 gvd~~~~~p~~~--------~~~~~~~--~~~~~----------------~~~~~~~~~----~l~~~~gl~~~~~~~~i 406 (612)
||.+..|-.... +++...+ +++.+ .+.|..+|. .++++.|+..+++...+
T Consensus 368 GVh~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfd 447 (713)
T PF00343_consen 368 GVHPRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFD 447 (713)
T ss_dssp -B-TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEE
T ss_pred CccCcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhh
Confidence 999999853211 1222111 12211 123333333 34567787777788899
Q ss_pred EEEccCccccCHHH-HH---HHHHhccc------CCeEEEEEecCC------hhHHHHHHHHHHH------CCC--ceEE
Q 007212 407 GFIGRLEEQKGSDI-LA---AAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQLEIL------YPE--KARG 462 (612)
Q Consensus 407 ~~iGrl~~~Kg~d~-li---~A~~~l~~------~~~~lvivG~g~------~~~~~~l~~l~~~------~~~--~v~~ 462 (612)
+++-|+.++|...+ ++ +-..++++ .++++++.|... +.+.+.+.+++.. ..+ +|.|
T Consensus 448 v~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvF 527 (713)
T PF00343_consen 448 VQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVF 527 (713)
T ss_dssp EEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEE
T ss_pred hhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEe
Confidence 99999999999888 33 33444443 268999999854 3455555555542 122 6899
Q ss_pred EeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEec
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~ 526 (612)
+..|+..++..++.+||+.+..|+ .|++|.+-+-+|..|.+.+++-.|...|+.++ ..+.|+||
T Consensus 528 lenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG 595 (713)
T PF00343_consen 528 LENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFG 595 (713)
T ss_dssp ETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES
T ss_pred ecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcC
Confidence 999999999999999999999998 49999999999999999999999999998764 46889996
No 115
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.85 E-value=1.5e-07 Score=89.32 Aligned_cols=182 Identities=19% Similarity=0.206 Sum_probs=112.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
.||++|++---| +..||.++++.+|+..|+++||+|+|.|..... .. ....++|++.
T Consensus 2 kkIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~-~~---------------------~~~~y~gv~l 58 (185)
T PF09314_consen 2 KKIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYY-PY---------------------KEFEYNGVRL 58 (185)
T ss_pred ceEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCC-CC---------------------CCcccCCeEE
Confidence 379999999778 689999999999999999999999999976221 11 0224568888
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCc-ccch
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWH-TSLI 243 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~-~~~~ 243 (612)
+.+..+..-. ...+.....+++.+++....+ -.+.|+ ++.+... .+++
T Consensus 59 ~~i~~~~~g~----------------------~~si~yd~~sl~~al~~~~~~--------~~~~~i-i~ilg~~~g~~~ 107 (185)
T PF09314_consen 59 VYIPAPKNGS----------------------AESIIYDFLSLLHALRFIKQD--------KIKYDI-ILILGYGIGPFF 107 (185)
T ss_pred EEeCCCCCCc----------------------hHHHHHHHHHHHHHHHHHhhc--------cccCCE-EEEEcCCccHHH
Confidence 8886543210 111222233334444221100 012575 6666555 3444
Q ss_pred HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh-HHHHHHHhhCCEEE
Q 007212 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVL 322 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~l~~ad~vi 322 (612)
..+++.+.+ .+.|+++.+|.+++.. - .++.+.+ ..+ .-++.+.+.||.+|
T Consensus 108 ~~~~r~~~~-----~g~~v~vN~DGlEWkR-~------KW~~~~k-----------------~~lk~~E~~avk~ad~lI 158 (185)
T PF09314_consen 108 LPFLRKLRK-----KGGKVVVNMDGLEWKR-A------KWGRPAK-----------------KYLKFSEKLAVKYADRLI 158 (185)
T ss_pred HHHHHhhhh-----cCCcEEECCCcchhhh-h------hcCHHHH-----------------HHHHHHHHHHHHhCCEEE
Confidence 444444321 3679999999877522 0 1111110 111 12356788999999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCcc
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 359 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd 359 (612)
+.|+...+.+.+. ++. .+..+|++|.|
T Consensus 159 aDs~~I~~y~~~~--y~~--------~~s~~IaYGad 185 (185)
T PF09314_consen 159 ADSKGIQDYIKER--YGR--------KKSTFIAYGAD 185 (185)
T ss_pred EcCHHHHHHHHHH--cCC--------CCcEEecCCCC
Confidence 9999999999963 441 27899999986
No 116
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.66 E-value=5.9e-06 Score=88.20 Aligned_cols=263 Identities=15% Similarity=0.164 Sum_probs=155.1
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+|+..-|-.+.+.+.+.... .++|++ .+|+ |....+ .++
T Consensus 93 ~Pd~vlv~GD~~~~la~alaA~~-------~~IPv~-Hvea----G~rs~~------~~e-------------------- 134 (365)
T TIGR03568 93 KPDLVVVLGDRFEMLAAAIAAAL-------LNIPIA-HIHG----GEVTEG------AID-------------------- 134 (365)
T ss_pred CCCEEEEeCCchHHHHHHHHHHH-------hCCcEE-EEEC----CccCCC------Cch--------------------
Confidence 58986666566666666666554 488988 4553 211100 011
Q ss_pred hHHHHHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeC-CccCCCcCCCcccccccccCcchhhhccH
Q 007212 308 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 308 ~~~~k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~n-gvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
+..+..+ +.|+..++.++..++.+.+ .|.+.+ +|.++-| ++|.-.+....
T Consensus 135 -E~~r~~i~~la~l~f~~t~~~~~~L~~---eg~~~~------~i~~tG~~~iD~l~~~~~~------------------ 186 (365)
T TIGR03568 135 -ESIRHAITKLSHLHFVATEEYRQRVIQ---MGEDPD------RVFNVGSPGLDNILSLDLL------------------ 186 (365)
T ss_pred -HHHHHHHHHHHhhccCCCHHHHHHHHH---cCCCCC------cEEEECCcHHHHHHhhhcc------------------
Confidence 1122233 4578999999999998886 566544 6776655 55543221110
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEccCc--c---ccCHHHHHHHHHhcccCCeEEEEE-e-cCChhHHHHHHHHHHHCCC
Q 007212 386 LLKEALQAEVGLPVDRNIPVIGFIGRLE--E---QKGSDILAAAIPHFIKENVQIIVL-G-TGKKPMEKQLEQLEILYPE 458 (612)
Q Consensus 386 ~~~~~l~~~~gl~~~~~~~~i~~iGrl~--~---~Kg~d~li~A~~~l~~~~~~lviv-G-~g~~~~~~~l~~l~~~~~~ 458 (612)
.+..+.+++|++.+. ..+++.+-+-+ . .+.+..+++++..+ ..++.++.- + .+.+...+.++++... ..
T Consensus 187 -~~~~~~~~lgl~~~~-~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~-~~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~ 262 (365)
T TIGR03568 187 -SKEELEEKLGIDLDK-PYALVTFHPVTLEKESAEEQIKELLKALDEL-NKNYIFTYPNADAGSRIINEAIEEYVNE-HP 262 (365)
T ss_pred -CHHHHHHHhCCCCCC-CEEEEEeCCCcccccCchHHHHHHHHHHHHh-ccCCEEEEeCCCCCchHHHHHHHHHhcC-CC
Confidence 145677888886432 23334444322 2 33455555555554 224433221 2 2223455566665422 24
Q ss_pred ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCC
Q 007212 459 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 459 ~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~ 538 (612)
++.........+...+++.||++|--| .|.. .||.++|+|+|+ .+.-+|.+..|.+.+++ ..
T Consensus 263 ~v~l~~~l~~~~~l~Ll~~a~~vitdS----Sggi-~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-----------g~ 324 (365)
T TIGR03568 263 NFRLFKSLGQERYLSLLKNADAVIGNS----SSGI-IEAPSFGVPTIN--IGTRQKGRLRADSVIDV-----------DP 324 (365)
T ss_pred CEEEECCCChHHHHHHHHhCCEEEEcC----hhHH-HhhhhcCCCEEe--ecCCchhhhhcCeEEEe-----------CC
Confidence 588888888888889999999999433 2333 899999999994 45677888777777753 56
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHH
Q 007212 539 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 539 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~ 583 (612)
|++++.+++.++++ ...+..+.. ....|...+.++++.++
T Consensus 325 ~~~~I~~a~~~~~~---~~~~~~~~~--~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 325 DKEEIVKAIEKLLD---PAFKKSLKN--VKNPYGDGNSSERIIEI 364 (365)
T ss_pred CHHHHHHHHHHHhC---hHHHHHHhh--CCCCCCCChHHHHHHHh
Confidence 89999999998543 222222211 23446666667776654
No 117
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.56 E-value=1.2e-07 Score=98.16 Aligned_cols=320 Identities=17% Similarity=0.241 Sum_probs=175.4
Q ss_pred CcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCccccc-CcccccccCCCcccccccccccCCCCCcCCch
Q 007212 229 KNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+-||-|.|+|+.+...++.+... ..+-.|||.|.... |++ +...+...+-.+.+ ..+...|-.+ .+-.
T Consensus 174 ~~vVahFHEW~AGVgL~l~R~rr------l~iaTifTTHATLL-GRyLCA~~~DfYNnLd~f--~vD~EAGkr~--IYHr 242 (692)
T KOG3742|consen 174 TAVVAHFHEWQAGVGLILCRARR------LDIATIFTTHATLL-GRYLCAGNVDFYNNLDSF--DVDKEAGKRQ--IYHR 242 (692)
T ss_pred hHHHHHHHHHHhccchheehhcc------cceEEEeehhHHHH-HHHHhcccchhhhchhhc--ccchhhccch--hHHH
Confidence 45667889999987666555432 37778999997654 332 22222211111111 0111111111 1123
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHH
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
.-+++++...|+.+.|||+-.+-+... +++++.=.+.|||.++..|..... + . .-.+..
T Consensus 243 YC~ERaa~h~AhVFTTVSeITa~EAeH----------lLkRKPD~itPNGLNV~KFsA~HE-F-------Q---NLHA~~ 301 (692)
T KOG3742|consen 243 YCLERAAAHTAHVFTTVSEITALEAEH----------LLKRKPDVITPNGLNVKKFSAVHE-F-------Q---NLHAQK 301 (692)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHHHHH----------HHhcCCCeeCCCCcceeehhHHHH-H-------H---HHHHHH
Confidence 345677777888999999876544332 233334566799999988754321 0 0 011222
Q ss_pred HHHHHHH--------hCCCCCCCCcEEEEEccCc-cccCHHHHHHHHHhccc------CC---eEEEEEecC--------
Q 007212 388 KEALQAE--------VGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN---VQIIVLGTG-------- 441 (612)
Q Consensus 388 ~~~l~~~--------~gl~~~~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~------~~---~~lvivG~g-------- 441 (612)
|+.+..- +...-+ +...+...||.+ .+||-|.+||+++.|-- .+ +.|+|.-..
T Consensus 302 KekIndFVRGHF~GhlDFdLd-kTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVes 380 (692)
T KOG3742|consen 302 KEKINDFVRGHFHGHLDFDLD-KTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVES 380 (692)
T ss_pred HHHHHHHhhhhcccccccccc-ceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhh
Confidence 3333222 111212 335667789998 69999999999998832 11 334443221
Q ss_pred ---C---hhHHH-----------------------------------HHHH----HHH-HCC------------------
Q 007212 442 ---K---KPMEK-----------------------------------QLEQ----LEI-LYP------------------ 457 (612)
Q Consensus 442 ---~---~~~~~-----------------------------------~l~~----l~~-~~~------------------ 457 (612)
. +.+.+ .+++ +.. .+|
T Consensus 381 LkgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~ 460 (692)
T KOG3742|consen 381 LKGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSS 460 (692)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHH
Confidence 0 00000 0000 000 011
Q ss_pred -------------CceEEEeccCh---H----HHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCccc---
Q 007212 458 -------------EKARGVAKFNI---P----LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD--- 514 (612)
Q Consensus 458 -------------~~v~~~~~~~~---~----~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e--- 514 (612)
.++.+.+.|.. + +..++..+|.+.|+||.+||+|.+..|+-.+|+|-|.++.+|+.-
T Consensus 461 iRr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMe 540 (692)
T KOG3742|consen 461 IRRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFME 540 (692)
T ss_pred hHhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHH
Confidence 12333333311 1 122578899999999999999999999999999999999988654
Q ss_pred -ceecC-cceEEeccccccccc-CCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH----HHhhcCcHHHHHHHHHHHHHH
Q 007212 515 -TVEEG-FTGFQMGSFSVDCEA-VDPVDVAAVSTTVRRALATYGTQALAEMMKNG----MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 515 -~v~~g-~~G~~~~~~~~~~~~-v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~----~~~~fsw~~~a~~~~~~y~~l 587 (612)
.|.+. ..|+.+ +|--. -..+++++|++.+...... ..++++.++. ...-.+|+.+...|.+.=.-+
T Consensus 541 ehi~d~~ayGIYI----vDRRfks~deSv~qL~~~m~~F~~q---sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~la 613 (692)
T KOG3742|consen 541 EHIEDPQAYGIYI----VDRRFKSPDESVQQLASFMYEFCKQ---SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLA 613 (692)
T ss_pred HHhcCchhceEEE----EecccCChhhHHHHHHHHHHHHHHH---HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHH
Confidence 44432 234433 11000 1224556677666666553 3444444433 466789999988887765444
Q ss_pred H
Q 007212 588 E 588 (612)
Q Consensus 588 ~ 588 (612)
+
T Consensus 614 L 614 (692)
T KOG3742|consen 614 L 614 (692)
T ss_pred H
Confidence 3
No 118
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.54 E-value=2.2e-05 Score=84.75 Aligned_cols=124 Identities=19% Similarity=0.176 Sum_probs=80.6
Q ss_pred CCcEEEEEccCcc---ccCHHHHHHHHHhcccCCeEEE-EEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007212 402 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 402 ~~~~i~~iGrl~~---~Kg~d~li~A~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 477 (612)
+.++++..|.... .+-...+++++..+ +.+++ .+|..... . ...++++......+.. .++..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~--~------~~~~~~v~~~~~~p~~---~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG--A------EDLPDNVRVVDFVPHD---WLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc--c------cCCCCceEEeCCCCHH---HHhhh
Confidence 3467778888743 45556667777665 55544 45544311 1 2345567655554433 47999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll 551 (612)
||++|.- +=..++.||+++|+|+|+....+ ..+.+.+.+.|... +.. +.+++.+++.+++
T Consensus 305 ~d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l----------~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 305 CAAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL----------DPRELTAERLAAALRRLL 370 (401)
T ss_pred hheeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC----------CcccCCHHHHHHHHHHHh
Confidence 9999932 33488999999999999887654 23344444566643 333 7899999999999
Q ss_pred Hh
Q 007212 552 AT 553 (612)
Q Consensus 552 ~~ 553 (612)
++
T Consensus 371 ~~ 372 (401)
T cd03784 371 DP 372 (401)
T ss_pred CH
Confidence 85
No 119
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.53 E-value=1.5e-05 Score=83.16 Aligned_cols=119 Identities=19% Similarity=0.269 Sum_probs=80.7
Q ss_pred CCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
...+++++|..... .++++++++ ++.+++++|....+ ....++. +..|..+...++++.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~~----------~~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAAD----------PRPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCccc----------ccCCCEE-EeecChHHHHHHHHhCCEE
Confidence 44689999988766 667888886 57888888765310 1134455 4556656677899999999
Q ss_pred EEcCCCCCCcHH-HHHHHHcCCceEEcCCCCccc------ceecCcceEEecccccccccCCCCCHHHHHHHHHHH
Q 007212 482 LIPSRFEPCGLI-QLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 482 v~pS~~E~~gl~-~lEAma~G~PvI~s~~gg~~e------~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~l 550 (612)
|.- .|.. +.||+++|+|+|+-...+..| .+++.+.|..+ -...-+++.|.+.|+++
T Consensus 255 Is~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~--------~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 255 ISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL--------SQEDLTPERLAEFLERL 317 (318)
T ss_pred EEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc--------ccccCCHHHHHHHHhcC
Confidence 954 3555 999999999999888765444 33334445543 01234678888877653
No 120
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.47 E-value=2.4e-05 Score=81.80 Aligned_cols=175 Identities=20% Similarity=0.205 Sum_probs=99.7
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEe-eCCccCCC----cCCCcccccccccCcchhhhccHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI-VNGMDVQE----WNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI-~ngvd~~~----~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+..||.+++..-.-...+.. +|.. + .+. +||++.-- |.| .
T Consensus 122 t~Pla~~i~~P~~~~~~~~~~---~G~~-~--------~i~~y~G~~E~ayl~~F~P----------------------d 167 (335)
T PF04007_consen 122 TLPLADVIITPEAIPKEFLKR---FGAK-N--------QIRTYNGYKELAYLHPFKP----------------------D 167 (335)
T ss_pred ehhcCCeeECCcccCHHHHHh---cCCc-C--------CEEEECCeeeEEeecCCCC----------------------C
Confidence 456789988877654444443 4533 2 234 67776433 444 3
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccC------HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKG------SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg------~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
..+.+++|+.. + ++|+. |.++.+. -+.+-+.++.|.+..-.++++-...+ . .++..+++ +..
T Consensus 168 ~~vl~~lg~~~--~-~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~-~----~~~~~~~~--~~i 235 (335)
T PF04007_consen 168 PEVLKELGLDD--E-PYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED-Q----RELFEKYG--VII 235 (335)
T ss_pred hhHHHHcCCCC--C-CEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc-h----hhHHhccC--ccc
Confidence 46788899652 2 45543 5444332 23345666666553333666654331 1 12222332 211
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC---CcccceecCcceEEecccccccccCCCCC
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d 539 (612)
... .-..+.++..||++|- +-|....||...|+|.|.+-.| +..+.+.+ .|+++ ...|
T Consensus 236 ~~~--~vd~~~Ll~~a~l~Ig-----~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~----------~~~~ 296 (335)
T PF04007_consen 236 PPE--PVDGLDLLYYADLVIG-----GGGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLY----------HSTD 296 (335)
T ss_pred cCC--CCCHHHHHHhcCEEEe-----CCcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeE----------ecCC
Confidence 111 1123368999999993 3468899999999999986543 33333333 47766 7789
Q ss_pred HHHHHHHHHHHHHh
Q 007212 540 VAAVSTTVRRALAT 553 (612)
Q Consensus 540 ~~~la~~i~~ll~~ 553 (612)
++++.+.+...+..
T Consensus 297 ~~ei~~~v~~~~~~ 310 (335)
T PF04007_consen 297 PDEIVEYVRKNLGK 310 (335)
T ss_pred HHHHHHHHHHhhhc
Confidence 99999877665543
No 121
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.44 E-value=0.00012 Score=78.88 Aligned_cols=191 Identities=15% Similarity=0.042 Sum_probs=112.9
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
.-+.|+.+++..+...+.+.+ .|+ ++.++=|.+=.... +.. +
T Consensus 157 ~~~~a~~v~~~~~~t~~~l~~---~g~---------k~~~vGnPv~d~l~-~~~--------------------~----- 198 (396)
T TIGR03492 157 RSRRCLAVFVRDRLTARDLRR---QGV---------RASYLGNPMMDGLE-PPE--------------------R----- 198 (396)
T ss_pred hchhhCEEeCCCHHHHHHHHH---CCC---------eEEEeCcCHHhcCc-ccc--------------------c-----
Confidence 446799999999988888875 332 45555554422111 100 0
Q ss_pred HhCCCCCCCCcEEEEEccC--ccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCCC------------
Q 007212 394 EVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPE------------ 458 (612)
Q Consensus 394 ~~gl~~~~~~~~i~~iGrl--~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~------------ 458 (612)
.+++.+ ...++++-|.- +-.+++..++++++.+.+ +++++++.-.+.... +.+++...+.+-
T Consensus 199 -~~l~~~-~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 199 -KPLLTG-RFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL-EKLQAILEDLGWQLEGSSEDQTSL 275 (396)
T ss_pred -cccCCC-CCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH-HHHHHHHHhcCceecCCccccchh
Confidence 033322 22344555554 235688899999999954 578887654232212 223332222110
Q ss_pred ----ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc---cceecC----cceEEecc
Q 007212 459 ----KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV---DTVEEG----FTGFQMGS 527 (612)
Q Consensus 459 ----~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~---e~v~~g----~~G~~~~~ 527 (612)
.+.... + ......+++.||++|..| |.+..|++++|+|+|.....+.. .+.+.. ..+..
T Consensus 276 ~~~~~~~v~~-~-~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g~~~~--- 345 (396)
T TIGR03492 276 FQKGTLEVLL-G-RGAFAEILHWADLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLGGSVF--- 345 (396)
T ss_pred hccCceEEEe-c-hHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcCCEEe---
Confidence 122222 2 234567999999999774 57779999999999998743331 111220 12222
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007212 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 564 (612)
+...+++.+++.+.+++++ ++.+.+|.+
T Consensus 346 -------l~~~~~~~l~~~l~~ll~d--~~~~~~~~~ 373 (396)
T TIGR03492 346 -------LASKNPEQAAQVVRQLLAD--PELLERCRR 373 (396)
T ss_pred -------cCCCCHHHHHHHHHHHHcC--HHHHHHHHH
Confidence 2567789999999999987 666666653
No 122
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.41 E-value=3.9e-05 Score=78.79 Aligned_cols=96 Identities=16% Similarity=0.172 Sum_probs=69.3
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEE-EEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
.+++++|..++.+....+++++.++. .++++ +++|.+.+ ..+.+++.....+ ++... . ..+.+..+++.||++|
T Consensus 172 ~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~-~~~~l~~~~~~~~-~i~~~-~-~~~~m~~lm~~aDl~I 246 (279)
T TIGR03590 172 RVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNP-NLDELKKFAKEYP-NIILF-I-DVENMAELMNEADLAI 246 (279)
T ss_pred eEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCc-CHHHHHHHHHhCC-CEEEE-e-CHHHHHHHHHHCCEEE
Confidence 57899999998887788899998763 34443 36677653 3355666665544 45532 3 3455668999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
.+ .|.++.|++++|+|+|+-..
T Consensus 247 s~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 247 GA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred EC-----CchHHHHHHHcCCCEEEEEe
Confidence 73 67999999999999997754
No 123
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.40 E-value=4.9e-05 Score=80.44 Aligned_cols=271 Identities=14% Similarity=0.140 Sum_probs=147.2
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+|++.=|-.+.+.+...... .++| |..+|. |.-..+. ..+.++
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~-------~~ip-v~Hiea----GlRs~d~--~~g~~d-------------------- 112 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFY-------LNIP-VAHIEA----GLRSGDR--TEGMPD-------------------- 112 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHH-------TT-E-EEEES---------S-T--TSSTTH--------------------
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-------hCCC-EEEecC----CCCcccc--CCCCch--------------------
Confidence 48987666677777776766665 4899 446663 2110000 001111
Q ss_pred hHHHHHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeC-CccCCCcCCCcccccccccCcchhhhccH
Q 007212 308 INWMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 308 ~~~~k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~n-gvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
+..|..+ +.|+.-++.++..++.+.+ .|.+.+ +|.++=| ++|.-.... .
T Consensus 113 -e~~R~~i~~la~lhf~~t~~~~~~L~~---~G~~~~------rI~~vG~~~~D~l~~~~-------------------~ 163 (346)
T PF02350_consen 113 -EINRHAIDKLAHLHFAPTEEARERLLQ---EGEPPE------RIFVVGNPGIDALLQNK-------------------E 163 (346)
T ss_dssp -HHHHHHHHHH-SEEEESSHHHHHHHHH---TT--GG------GEEE---HHHHHHHHHH-------------------H
T ss_pred -hhhhhhhhhhhhhhccCCHHHHHHHHh---cCCCCC------eEEEEChHHHHHHHHhH-------------------H
Confidence 2334444 4599999999999999997 788766 7887765 333211100 0
Q ss_pred HHHHHH-HHHhCCCCCCCCcEEEEEccCc--c-ccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCCCce
Q 007212 386 LLKEAL-QAEVGLPVDRNIPVIGFIGRLE--E-QKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKA 460 (612)
Q Consensus 386 ~~~~~l-~~~~gl~~~~~~~~i~~iGrl~--~-~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v 460 (612)
...+.+ ...+... ..+..+++..=|.+ . ......+.++++.+.+ .++++++.....+...+.+.+...++ .++
T Consensus 164 ~~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v 241 (346)
T PF02350_consen 164 EIEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNV 241 (346)
T ss_dssp TTCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTE
T ss_pred HHhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCE
Confidence 000000 1111001 12334444443333 2 3456777788887766 58999998886666677777666666 478
Q ss_pred EEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC-CCCcccceecCcceEEecccccccccCCCCC
Q 007212 461 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 461 ~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d 539 (612)
..+..........+++.|+++|-= .|.++-||..+|+|+|.-. .|--.+.+..+.+-+ + ..|
T Consensus 242 ~~~~~l~~~~~l~ll~~a~~vvgd-----SsGI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v-----------~~~ 304 (346)
T PF02350_consen 242 RLIEPLGYEEYLSLLKNADLVVGD-----SSGIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-V-----------GTD 304 (346)
T ss_dssp EEE----HHHHHHHHHHESEEEES-----SHHHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-E-----------TSS
T ss_pred EEECCCCHHHHHHHHhcceEEEEc-----CccHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-e-----------CCC
Confidence 888888888888899999999833 3544449999999999885 455567766665544 4 489
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHH
Q 007212 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 540 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y 584 (612)
.+++.+++.+++++ ...+.++.. ....|.-.+.++++.+++
T Consensus 305 ~~~I~~ai~~~l~~--~~~~~~~~~--~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 305 PEAIIQAIEKALSD--KDFYRKLKN--RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHC--S--TT-SS-HHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--hHHHHhhcc--CCCCCCCCcHHHHHHHhh
Confidence 99999999999986 344443322 123455556666666655
No 124
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.29 E-value=1.2e-05 Score=72.98 Aligned_cols=34 Identities=29% Similarity=0.463 Sum_probs=28.5
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
|||+|+... +.++..++++|.++||+|++++++.
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~ 34 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRN 34 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 789998763 2367899999999999999999963
No 125
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.11 E-value=0.0083 Score=62.93 Aligned_cols=223 Identities=17% Similarity=0.108 Sum_probs=142.5
Q ss_pred hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHHHHHH
Q 007212 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 394 (612)
.-||.-++.++..++.|.+ .|++.+ +|.++-|.+ |.-.+.-. +..........
T Consensus 144 ~~S~~hfapte~ar~nLl~---EG~~~~------~IfvtGnt~iDal~~~~~-----------------~~~~~~~~~~~ 197 (383)
T COG0381 144 HLSDLHFAPTEIARKNLLR---EGVPEK------RIFVTGNTVIDALLNTRD-----------------RVLEDSKILAK 197 (383)
T ss_pred HhhhhhcCChHHHHHHHHH---cCCCcc------ceEEeCChHHHHHHHHHh-----------------hhccchhhHHh
Confidence 3589999999999999997 777755 788887754 22111100 00001112222
Q ss_pred -hCCCCCCCCcEEEEEccCcc-ccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHH
Q 007212 395 -VGLPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 395 -~gl~~~~~~~~i~~iGrl~~-~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 470 (612)
++.. .++.+++..=|-+- .+++..+++++.++.+ ++++++.--...+...+.. ....+...++..+..+.-..
T Consensus 198 ~~~~~--~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~-~~~L~~~~~v~li~pl~~~~ 274 (383)
T COG0381 198 GLDDK--DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV-LKRLKNVERVKLIDPLGYLD 274 (383)
T ss_pred hhccc--cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH-HHHhCCCCcEEEeCCcchHH
Confidence 2222 22355555556543 3899999999988876 4777666544332232222 22222224588888888888
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
.+.++..|-+++- ..|..+=||-..|+||++-+.. .-+|.++.| +-.+ -..|.+.+.+.+..
T Consensus 275 f~~L~~~a~~ilt-----DSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~l-----------vg~~~~~i~~~~~~ 337 (383)
T COG0381 275 FHNLMKNAFLILT-----DSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNIL-----------VGTDEENILDAATE 337 (383)
T ss_pred HHHHHHhceEEEe-----cCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEE-----------eCccHHHHHHHHHH
Confidence 8889999966663 3578899999999999988753 345666554 3333 45688999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
++++ ++.+++|+.. ...|.--+.++++.+++++-.
T Consensus 338 ll~~--~~~~~~m~~~--~npYgdg~as~rIv~~l~~~~ 372 (383)
T COG0381 338 LLED--EEFYERMSNA--KNPYGDGNASERIVEILLNYF 372 (383)
T ss_pred HhhC--hHHHHHHhcc--cCCCcCcchHHHHHHHHHHHh
Confidence 9998 6677666553 455666666777777666544
No 126
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=98.08 E-value=0.00027 Score=73.69 Aligned_cols=193 Identities=14% Similarity=0.074 Sum_probs=118.1
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (612)
....+.+|.++++=|...+.+.+ +|.+ .+.|-|.+ |.-.+.+ +++.
T Consensus 131 ~~i~~~~D~lLailPFE~~~y~k---~g~~---------~~yVGHpl~d~i~~~~---------------------~r~~ 177 (381)
T COG0763 131 VKIAKYVDHLLAILPFEPAFYDK---FGLP---------CTYVGHPLADEIPLLP---------------------DREA 177 (381)
T ss_pred HHHHHHhhHeeeecCCCHHHHHh---cCCC---------eEEeCChhhhhccccc---------------------cHHH
Confidence 34566799999999999988886 4432 23333322 2211222 2677
Q ss_pred HHHHhCCCCCCCCcEEEEEcc-Ccc-ccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc
Q 007212 391 LQAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 466 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGr-l~~-~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~ 466 (612)
.++++|++.+. +.+.+..|. -.+ .+-...+.+|+..++. ++.++++--... ..+.+.....+.+. .......
T Consensus 178 ar~~l~~~~~~-~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~--~~~~~~~~~~~~~~-~~~~~~~ 253 (381)
T COG0763 178 AREKLGIDADE-KTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA--KYRRIIEEALKWEV-AGLSLIL 253 (381)
T ss_pred HHHHhCCCCCC-CeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH--HHHHHHHHHhhccc-cCceEEe
Confidence 99999998764 345566664 333 5678889999999974 789998866544 22223333222221 1112223
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCc----------------ccceecCcceEEecccc
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGL----------------VDTVEEGFTGFQMGSFS 529 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~----------------~e~v~~g~~G~~~~~~~ 529 (612)
.+...++.+..||+.+..| |.+.||++.+|+|.|++ .+..+ +.++-+. .+++++-
T Consensus 254 ~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~---~ivPEli 325 (381)
T COG0763 254 IDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGR---EIVPELI 325 (381)
T ss_pred cCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCC---ccchHHH
Confidence 3445567899999988654 89999999999999876 33322 2222111 1111110
Q ss_pred cccccCCCCCHHHHHHHHHHHHHhh
Q 007212 530 VDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 530 ~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
-....++.+++++..++.+.
T Consensus 326 -----q~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 326 -----QEDCTPENLARALEELLLNG 345 (381)
T ss_pred -----hhhcCHHHHHHHHHHHhcCh
Confidence 12345788999999998883
No 127
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.05 E-value=0.0018 Score=68.74 Aligned_cols=192 Identities=18% Similarity=0.148 Sum_probs=116.5
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
+..-+.+|.++++=|+..+.+.+ .|+ +++.+-|.+= +...+.. .+...
T Consensus 128 ~~i~~~~D~ll~ifPFE~~~y~~---~g~---------~~~~VGHPl~-d~~~~~~-------------------~~~~~ 175 (373)
T PF02684_consen 128 KKIKKYVDHLLVIFPFEPEFYKK---HGV---------PVTYVGHPLL-DEVKPEP-------------------DRAEA 175 (373)
T ss_pred HHHHHHHhheeECCcccHHHHhc---cCC---------CeEEECCcch-hhhccCC-------------------CHHHH
Confidence 44456789999999999998886 454 3444444321 1111111 03445
Q ss_pred HHHhCCCCCCCCcEEEEEcc-Ccc-ccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccC
Q 007212 392 QAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGr-l~~-~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~ 467 (612)
++.+ ++.++ ..+.+..|. -.+ .+.+..++++++.+.+ +++++++..... ...+.+++.....+..+.....
T Consensus 176 ~~~~-l~~~~-~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~~~-- 250 (373)
T PF02684_consen 176 REKL-LDPDK-PIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIVII-- 250 (373)
T ss_pred HHhc-CCCCC-cEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEEEc--
Confidence 5555 66443 234455554 334 4567999999999976 789998876543 3444455555444433332221
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCC----------------cccceecCcceEEeccccc
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGG----------------LVDTVEEGFTGFQMGSFSV 530 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg----------------~~e~v~~g~~G~~~~~~~~ 530 (612)
.......+++||+.+..| |.+.||++.+|+|.|+. .++. ++.++-+. -+++++
T Consensus 251 ~~~~~~~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~---~v~PEl-- 320 (373)
T PF02684_consen 251 EGESYDAMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGR---EVVPEL-- 320 (373)
T ss_pred CCchHHHHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCC---Ccchhh--
Confidence 223446899999999766 89999999999998754 3432 22222211 112222
Q ss_pred ccccCCCCCHHHHHHHHHHHHHh
Q 007212 531 DCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 531 ~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+-+..+++.+++.+..++++
T Consensus 321 ---iQ~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 321 ---IQEDATPENIAAELLELLEN 340 (373)
T ss_pred ---hcccCCHHHHHHHHHHHhcC
Confidence 12456899999999999988
No 128
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.98 E-value=0.0026 Score=70.72 Aligned_cols=196 Identities=14% Similarity=0.114 Sum_probs=113.3
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (612)
+..-+..|.++++=|...+.+.+ .|+ +++.+-|.. |. ..+.. .+++
T Consensus 356 kki~k~vD~ll~IfPFE~~~y~~---~gv---------~v~yVGHPL~d~--i~~~~-------------------~~~~ 402 (608)
T PRK01021 356 TILEKYLDLLLLILPFEQNLFKD---SPL---------RTVYLGHPLVET--ISSFS-------------------PNLS 402 (608)
T ss_pred HHHHHHhhhheecCccCHHHHHh---cCC---------CeEEECCcHHhh--cccCC-------------------CHHH
Confidence 44456789999999999888886 454 334444432 22 11111 1556
Q ss_pred HHHHhCCCCCCCCcEEEEEcc-Ccc-ccCHHHHHHHHH--hcccCCeEEEEEecCChhHHHHHHHHHHHCC-CceEEEec
Q 007212 391 LQAEVGLPVDRNIPVIGFIGR-LEE-QKGSDILAAAIP--HFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAK 465 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGr-l~~-~Kg~d~li~A~~--~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~ 465 (612)
.++++|++.+. ..+-+..|. -.+ .+.+..+++|++ .+. ++.++++.... ....+.+++.....+ ..+....
T Consensus 403 ~r~~lgl~~~~-~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~-~~l~fvvp~a~-~~~~~~i~~~~~~~~~~~~~ii~- 478 (608)
T PRK01021 403 WKEQLHLPSDK-PIVAAFPGSRRGDILRNLTIQVQAFLASSLA-STHQLLVSSAN-PKYDHLILEVLQQEGCLHSHIVP- 478 (608)
T ss_pred HHHHcCCCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHHHHhc-cCeEEEEecCc-hhhHHHHHHHHhhcCCCCeEEec-
Confidence 78889996543 334455554 333 567899999998 553 46888775432 234455555543322 1122221
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceec-------CcceE---Eeccccccccc
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEE-------GFTGF---QMGSFSVDCEA 534 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~-------g~~G~---~~~~~~~~~~~ 534 (612)
+...++++++||+.+..| |.+.||++.+|+|.|+. ..+.+.-.+.. ..-|+ +.| -.+-.++
T Consensus 479 --~~~~~~~m~aaD~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIag-r~VvPEl 550 (608)
T PRK01021 479 --SQFRYELMRECDCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILG-STIFPEF 550 (608)
T ss_pred --CcchHHHHHhcCeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcC-CCcchhh
Confidence 112357999999999776 89999999999998764 33322221110 00000 000 0111233
Q ss_pred C---CCCCHHHHHHHHHHHHHh
Q 007212 535 V---DPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 535 v---~~~d~~~la~~i~~ll~~ 553 (612)
+ +..+++.+++.+ +++.+
T Consensus 551 lqgQ~~~tpe~La~~l-~lL~d 571 (608)
T PRK01021 551 IGGKKDFQPEEVAAAL-DILKT 571 (608)
T ss_pred cCCcccCCHHHHHHHH-HHhcC
Confidence 3 456789999986 77776
No 129
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=97.95 E-value=0.0057 Score=68.17 Aligned_cols=122 Identities=11% Similarity=0.021 Sum_probs=79.8
Q ss_pred cEEEEEccCcc-----ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--H
Q 007212 404 PVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--A 476 (612)
Q Consensus 404 ~~i~~iGrl~~-----~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~ 476 (612)
++++..|.... .+-...+++|++.+ +.++++..++.. . . ...|+++.....++... ++ .
T Consensus 298 ~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~-~-~------~~~p~Nv~i~~w~Pq~~---lL~hp 363 (507)
T PHA03392 298 VVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV-E-A------INLPANVLTQKWFPQRA---VLKHK 363 (507)
T ss_pred EEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc-C-c------ccCCCceEEecCCCHHH---HhcCC
Confidence 67777888642 33456777777776 457666554431 1 0 23466787766666543 67 4
Q ss_pred hccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCC--CCHHHHHHHHHHH
Q 007212 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRA 550 (612)
Q Consensus 477 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~--~d~~~la~~i~~l 550 (612)
.++++|. -|=..++.||+.+|+|+|+-...+ ...-+.+-+.|... +. -+.+++.++|.++
T Consensus 364 ~v~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l----------~~~~~t~~~l~~ai~~v 429 (507)
T PHA03392 364 NVKAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRAL----------DTVTVSAAQLVLAIVDV 429 (507)
T ss_pred CCCEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEe----------ccCCcCHHHHHHHHHHH
Confidence 5888883 333567999999999999876532 33334444567654 33 3678999999999
Q ss_pred HHh
Q 007212 551 LAT 553 (612)
Q Consensus 551 l~~ 553 (612)
+++
T Consensus 430 l~~ 432 (507)
T PHA03392 430 IEN 432 (507)
T ss_pred hCC
Confidence 987
No 130
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.89 E-value=0.00065 Score=73.65 Aligned_cols=178 Identities=16% Similarity=0.059 Sum_probs=103.9
Q ss_pred HHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC---CceEEEec
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAK 465 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~~ 465 (612)
.|+++|||.+. ++++...++ .|=.+..++++.++.+ |+..|++...+. ..++.+++...+.+ +++.+...
T Consensus 275 ~R~~~gLp~d~--vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~-~~~~~l~~~~~~~Gv~~~Ri~f~~~ 349 (468)
T PF13844_consen 275 TRAQYGLPEDA--VVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPA-SGEARLRRRFAAHGVDPDRIIFSPV 349 (468)
T ss_dssp ETGGGT--SSS--EEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETST-THHHHHHHHHHHTTS-GGGEEEEE-
T ss_pred CHHHcCCCCCc--eEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCH-HHHHHHHHHHHHcCCChhhEEEcCC
Confidence 37889999654 566665554 6666777777777765 899998876543 23455555555543 57777665
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCccccee------cCcceEEecccccccccCCCCC
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~------~g~~G~~~~~~~~~~~~v~~~d 539 (612)
-..++.-..++.+|+++=|.-+ +-+.+.+||+.+|+|||+-....+..=+. -|..-+ -..|
T Consensus 350 ~~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El------------IA~s 416 (468)
T PF13844_consen 350 APREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL------------IADS 416 (468)
T ss_dssp --HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG------------B-SS
T ss_pred CCHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh------------cCCC
Confidence 5555544678999999977432 34688999999999999876433322111 011222 2367
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH---H--HhhcCcHHHHHHHHHHHHHHH
Q 007212 540 VAAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 540 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~--~~~fsw~~~a~~~~~~y~~l~ 588 (612)
.++.++...++.++ .+.++++.++- + ..-|+-...++++++.|+.+.
T Consensus 417 ~~eYv~~Av~La~D--~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~mW 468 (468)
T PF13844_consen 417 EEEYVEIAVRLATD--PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQMW 468 (468)
T ss_dssp HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHhC
Confidence 89999998898888 44444443332 2 345888999999999998763
No 131
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.87 E-value=0.0009 Score=72.38 Aligned_cols=158 Identities=17% Similarity=0.148 Sum_probs=95.9
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
.++....|..... .+.+-.+++.+.+-+.++++...+.+ ......++++.....++... ++..||++|
T Consensus 238 ~~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~-------~~~~~~p~n~~v~~~~p~~~---~l~~ad~vI 305 (406)
T COG1819 238 PIVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGAR-------DTLVNVPDNVIVADYVPQLE---LLPRADAVI 305 (406)
T ss_pred CeEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEeccccc-------cccccCCCceEEecCCCHHH---HhhhcCEEE
Confidence 3566667776655 44444444444445888888764421 11123455666665555544 799999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 558 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~ 558 (612)
...- -.++.||+.+|+|+|+-..+ ...+-+++-+.|... ..+....+.++++|.+++++..-..
T Consensus 306 ~hGG----~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l--------~~~~l~~~~l~~av~~vL~~~~~~~ 373 (406)
T COG1819 306 HHGG----AGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL--------PFEELTEERLRAAVNEVLADDSYRR 373 (406)
T ss_pred ecCC----cchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec--------CcccCCHHHHHHHHHHHhcCHHHHH
Confidence 6653 45789999999999877544 244556666778765 2346899999999999999732122
Q ss_pred HHHHHHHHHHhhcCcHHHHHHHHHHH
Q 007212 559 LAEMMKNGMAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 559 ~~~~~~~~~~~~fsw~~~a~~~~~~y 584 (612)
..+..++.+.+.-.-+..++..++..
T Consensus 374 ~~~~~~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 374 AAERLAEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHHHHHhhhcccHHHHHHHHHHHH
Confidence 22222222344444444444444433
No 132
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.87 E-value=0.0029 Score=66.79 Aligned_cols=209 Identities=18% Similarity=0.116 Sum_probs=132.7
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+.+..++..|.|++.|+..++.+.+ .|.. ++.+.-| ........ .......
T Consensus 169 ~~~~~~~~~i~li~aQse~D~~Rf~~---LGa~--------~v~v~GN---lKfd~~~~--------------~~~~~~~ 220 (419)
T COG1519 169 FLARLLFKNIDLILAQSEEDAQRFRS---LGAK--------PVVVTGN---LKFDIEPP--------------PQLAAEL 220 (419)
T ss_pred HHHHHHHHhcceeeecCHHHHHHHHh---cCCc--------ceEEecc---eeecCCCC--------------hhhHHHH
Confidence 45677889999999999999999998 6765 3333333 21111111 1112234
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEE---
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV--- 463 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~--- 463 (612)
..++..++.+ +++++..+. +..--+.+++++.++++ ++..++++=. .++-.+.++++..+.+-.+..+
T Consensus 221 ~~~r~~l~~~----r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPR-HpERf~~v~~l~~~~gl~~~~rS~~ 293 (419)
T COG1519 221 AALRRQLGGH----RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPR-HPERFKAVENLLKRKGLSVTRRSQG 293 (419)
T ss_pred HHHHHhcCCC----CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecC-ChhhHHHHHHHHHHcCCeEEeecCC
Confidence 5677777653 368888887 34445668999999877 5777766654 3444555666666543222111
Q ss_pred -----------eccChHHHHHHHHhccEEEEcCCCC-CCcHHHHHHHHcCCceEEcC-CCCccccee---cCcceEEecc
Q 007212 464 -----------AKFNIPLAHMIIAGADFILIPSRFE-PCGLIQLHAMRYGTVPIVAS-TGGLVDTVE---EGFTGFQMGS 527 (612)
Q Consensus 464 -----------~~~~~~~~~~i~~~aDv~v~pS~~E-~~gl~~lEAma~G~PvI~s~-~gg~~e~v~---~g~~G~~~~~ 527 (612)
+.--++ +..+|..||+.++--.+- -=|--+||+.++|+|+|.-. +-...|+.+ ..+.|+.+
T Consensus 294 ~~~~~~tdV~l~DtmGE-L~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v-- 370 (419)
T COG1519 294 DPPFSDTDVLLGDTMGE-LGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQV-- 370 (419)
T ss_pred CCCCCCCcEEEEecHhH-HHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEE--
Confidence 111122 346899999988776553 34557999999999999765 334444333 34456654
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 007212 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 567 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~ 567 (612)
.|.+.+++.+..++.+ ...++++++++.
T Consensus 371 ----------~~~~~l~~~v~~l~~~--~~~r~~~~~~~~ 398 (419)
T COG1519 371 ----------EDADLLAKAVELLLAD--EDKREAYGRAGL 398 (419)
T ss_pred ----------CCHHHHHHHHHHhcCC--HHHHHHHHHHHH
Confidence 5678888888888877 677788877773
No 133
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.78 E-value=0.0042 Score=62.82 Aligned_cols=185 Identities=20% Similarity=0.238 Sum_probs=111.4
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
+..+..||.+++.+......+.. +|..+.++..-..+.-+.| ...|.|. .++
T Consensus 121 kl~~Pla~~ii~P~~~~~~~~~~---~G~~p~~i~~~~giae~~~---v~~f~pd----------------------~ev 172 (346)
T COG1817 121 KLTLPLADVIITPEAIDEEELLD---FGADPNKISGYNGIAELAN---VYGFVPD----------------------PEV 172 (346)
T ss_pred hcchhhhhheecccccchHHHHH---hCCCccceecccceeEEee---cccCCCC----------------------HHH
Confidence 44677899999999888877775 6766554443334444433 2335554 457
Q ss_pred HHHhCCCCCCCCcEEEE-Ecc-----CccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEec
Q 007212 392 QAEVGLPVDRNIPVIGF-IGR-----LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~-iGr-----l~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~ 465 (612)
.+++|+..+. +.|++ .-. ...+++.+.+.++++.|.+.. ++++-... +..+.+ +.+.+.+ ...
T Consensus 173 lkeLgl~~~~--~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr~~-~~~eif----e~~~n~i--~pk 241 (346)
T COG1817 173 LKELGLEEGE--TYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPREK-EQAEIF----EGYRNII--IPK 241 (346)
T ss_pred HHHcCCCCCC--ceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecCch-hHHHHH----hhhcccc--CCc
Confidence 8889998652 34433 111 235778888999999996544 44444322 222222 2322111 111
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC---CcccceecCcceEEecccccccccCCCCCHHH
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 542 (612)
-..+.+ .++-.|++++ -+-|.-.-||...|+|.|...-| +..+...+ .|.++ ...|+.+
T Consensus 242 ~~vD~l-~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~lie--~G~~~----------~s~~~~~ 303 (346)
T COG1817 242 KAVDTL-SLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLIE--KGLLY----------HSTDEIA 303 (346)
T ss_pred ccccHH-HHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHHh--cCcee----------ecCCHHH
Confidence 111212 4677788887 34567789999999999988744 23333333 57766 6677777
Q ss_pred HHHHHHHHHHh
Q 007212 543 VSTTVRRALAT 553 (612)
Q Consensus 543 la~~i~~ll~~ 553 (612)
..+.+.+.+.+
T Consensus 304 ~~~~a~~~l~~ 314 (346)
T COG1817 304 IVEYAVRNLKY 314 (346)
T ss_pred HHHHHHHHhhc
Confidence 77777777766
No 134
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=97.77 E-value=0.0022 Score=67.15 Aligned_cols=119 Identities=13% Similarity=0.161 Sum_probs=72.0
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
.+++|.|. -+...+++++.++ +++.+++ |..+. .. ..+++++... .+..+.+..++..||++|.
T Consensus 190 ~iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~-~~-------~~~~~~v~~~-~~~~~~~~~~l~~ad~vI~ 253 (321)
T TIGR00661 190 YILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEV-AK-------NSYNENVEIR-RITTDNFKELIKNAELVIT 253 (321)
T ss_pred cEEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCC-Cc-------cccCCCEEEE-ECChHHHHHHHHhCCEEEE
Confidence 45566544 3456777887776 4555544 43221 11 1234456655 4554556789999999997
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCCCCccc------ceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 484 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e------~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
-+-+ .++.||+++|+|+|+....+..| .+.+.+.|... +..+. ++.+++...+++
T Consensus 254 ~~G~----~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l----------~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 254 HGGF----SLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL----------EYKEL-RLLEAILDIRNM 314 (321)
T ss_pred CCCh----HHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc----------ChhhH-HHHHHHHhcccc
Confidence 6632 46999999999999988765444 34444567654 55665 444444444443
No 135
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.55 E-value=0.19 Score=54.64 Aligned_cols=215 Identities=13% Similarity=0.114 Sum_probs=111.7
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+.+..++++|.|.+=-+.-.+.+.+ .|++.. ++.+.+ |+.+.-|.... . ....
T Consensus 168 ~l~r~vl~~~~~ItvRD~~S~~~Lk~---lGv~~~------~v~~~a---DpAF~L~~~~~-------------~-~~~~ 221 (426)
T PRK10017 168 QLANYVFGHCDALILRESVSLDLMKR---SNITTA------KVEHGV---DTAWLVDHHTE-------------D-FTAS 221 (426)
T ss_pred HHHHHHHhcCCEEEEccHHHHHHHHH---hCCCcc------ceEEec---ChhhhCCcccc-------------c-cccc
Confidence 34577889999987777766777765 676533 444443 54432221100 0 0000
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcc-Ccc---------ccCHHHHHHHHHhcccCCeEEEEEec--C----ChhHHHHHHHH
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGR-LEE---------QKGSDILAAAIPHFIKENVQIIVLGT--G----KKPMEKQLEQL 452 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGr-l~~---------~Kg~d~li~A~~~l~~~~~~lvivG~--g----~~~~~~~l~~l 452 (612)
..+....+.+. ..++|++.-| +.+ +.-...+.+++..+.+.+.+++++-. + .+......+++
T Consensus 222 ~~~~~~~~~~~--~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l 299 (426)
T PRK10017 222 YAVQHWLDVAA--QQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNL 299 (426)
T ss_pred hhhhhhhcccc--cCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHH
Confidence 01111122222 2246655433 321 11224566777777666666665543 1 11122223344
Q ss_pred HHHCCC--ceE-EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC-cccceec-CcceEEecc
Q 007212 453 EILYPE--KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEE-GFTGFQMGS 527 (612)
Q Consensus 453 ~~~~~~--~v~-~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~-g~~G~~~~~ 527 (612)
...++. ++. ....++..++..+++.||++|-.-. =.++=|++.|+|+|+-.... ...++++ |...+.+
T Consensus 300 ~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~-- 372 (426)
T PRK10017 300 RQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAI-- 372 (426)
T ss_pred HHhcccccceeEecCCCChHHHHHHHhhCCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEe--
Confidence 444332 222 2334666677789999999874433 24566999999999877521 1222221 1122221
Q ss_pred cccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 007212 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG 566 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~ 566 (612)
-++.-+.++|.+.+.+++++ .+.+++.-++.
T Consensus 373 ------~~~~l~~~~Li~~v~~~~~~--r~~~~~~l~~~ 403 (426)
T PRK10017 373 ------DIRHLLDGSLQAMVADTLGQ--LPALNARLAEA 403 (426)
T ss_pred ------chhhCCHHHHHHHHHHHHhC--HHHHHHHHHHH
Confidence 12455678999999999998 54444433333
No 136
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.31 E-value=0.021 Score=58.23 Aligned_cols=165 Identities=16% Similarity=0.163 Sum_probs=110.5
Q ss_pred cEEEEEccC-ccccCHHHHHHHHHhcccCCeEEEE-Eec--CChhHHHHHHHHHHHC-C-CceEEEecc-ChHHHHHHHH
Q 007212 404 PVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIV-LGT--GKKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 476 (612)
Q Consensus 404 ~~i~~iGrl-~~~Kg~d~li~A~~~l~~~~~~lvi-vG~--g~~~~~~~l~~l~~~~-~-~~v~~~~~~-~~~~~~~i~~ 476 (612)
++-+.+|+= ++.-++..+++++++....++++++ +|- |++.|.+++.+.+.++ + +++.....+ +-++...+++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 455566765 5778888999999888778888776 354 6788999999988874 4 577766665 4455568999
Q ss_pred hccEEEEcCC-CCCCcHHHHHHHHcCCceEEcC-CCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007212 477 GADFILIPSR-FEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 477 ~aDv~v~pS~-~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
.||+.++--. .++.|+.++ .+..|+||+.++ +.-..++.+.|. -++| . -+.-|...+.++=+++
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv-~Vlf---~-----~d~L~~~~v~e~~rql---- 291 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGL-PVLF---T-----GDDLDEDIVREAQRQL---- 291 (322)
T ss_pred hCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCC-eEEe---c-----CCcccHHHHHHHHHHH----
Confidence 9999998775 589999877 799999998885 455556555443 3323 0 0222322222211111
Q ss_pred CHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
...-++.+. |+-++..+.|.++|..+..
T Consensus 292 -----~~~dk~~I~--Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 292 -----ASVDKNIIA--FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred -----HhhCcceee--ecCHhHHHHHHHHHHHhhC
Confidence 111112223 9999999999999987654
No 137
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=97.17 E-value=0.0081 Score=64.71 Aligned_cols=156 Identities=14% Similarity=0.094 Sum_probs=86.4
Q ss_pred CcEEEEEccCcccc--CHHHHHHHHHhcccCCeEEE-EEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 403 IPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 403 ~~~i~~iGrl~~~K--g~d~li~A~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
.++++..|.+...+ -++.+++++.+ .+++++ ..|.+.. ...+. ..++++......+.. .+++.||
T Consensus 226 ~~v~vs~Gs~~~~~~~~~~~~~~al~~---~~~~~i~~~g~~~~--~~~~~----~~~~~v~~~~~~p~~---~ll~~~~ 293 (392)
T TIGR01426 226 PVVLISLGTVFNNQPSFYRTCVEAFRD---LDWHVVLSVGRGVD--PADLG----ELPPNVEVRQWVPQL---EILKKAD 293 (392)
T ss_pred CEEEEecCccCCCCHHHHHHHHHHHhc---CCCeEEEEECCCCC--hhHhc----cCCCCeEEeCCCCHH---HHHhhCC
Confidence 35677788864332 22334444433 355655 4455431 11222 234567655554432 5799999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
++|..+- ..+++||+++|+|+|+....+ ..+.+.+.+.|..+. -..-+.++++++|++++.++.
T Consensus 294 ~~I~hgG----~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~--------~~~~~~~~l~~ai~~~l~~~~ 361 (392)
T TIGR01426 294 AFITHGG----MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP--------PEEVTAEKLREAVLAVLSDPR 361 (392)
T ss_pred EEEECCC----chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec--------cccCCHHHHHHHHHHHhcCHH
Confidence 9996553 247899999999999976443 223344445666541 123367899999999998732
Q ss_pred H-HHHHHHHHHHHHhhcCcHHHHHHHHHH
Q 007212 556 T-QALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 556 ~-~~~~~~~~~~~~~~fsw~~~a~~~~~~ 583 (612)
- +..+++.+. +.+.-.-+..++..+++
T Consensus 362 ~~~~~~~l~~~-~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 362 YAERLRKMRAE-IREAGGARRAADEIEGF 389 (392)
T ss_pred HHHHHHHHHHH-HHHcCCHHHHHHHHHHh
Confidence 1 122222222 23333445555555443
No 138
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.02 E-value=0.063 Score=56.05 Aligned_cols=188 Identities=12% Similarity=0.063 Sum_probs=121.1
Q ss_pred CeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcc
Q 007212 350 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 429 (612)
Q Consensus 350 ~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~ 429 (612)
+...++.++|.+.|.|.... ..-.--+.++|.-.+. ..+.++++.
T Consensus 162 ~~~~~~~a~d~~~~~~i~~d------------------------------a~~~~dL~~ign~~pD-----r~e~~ke~~ 206 (373)
T COG4641 162 NCYYLPWAVDDSLFHPIPPD------------------------------ASYDVDLNLIGNPYPD-----RVEEIKEFF 206 (373)
T ss_pred ceeccCccCCchhcccCCcc------------------------------ccceeeeEEecCCCcc-----HHHHHHHHh
Confidence 77889999999988876420 0112358888887665 344444432
Q ss_pred c-C------CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccCh-HHHHHHHHhccEEEEcCCC---CC---CcHHHH
Q 007212 430 K-E------NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI-PLAHMIIAGADFILIPSRF---EP---CGLIQL 495 (612)
Q Consensus 430 ~-~------~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~-~~~~~i~~~aDv~v~pS~~---E~---~gl~~l 495 (612)
. + +-++...|..- -..+.. .....++...++++. ...+..++.-|+.+.-++. ++ +.+-++
T Consensus 207 ~~ps~kl~v~rr~~~~g~~y---~~~~~~--~~~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvF 281 (373)
T COG4641 207 VEPSFKLMVDRRFYVLGPRY---PDDIWG--RTWEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVF 281 (373)
T ss_pred hccchhhhccceeeecCCcc---chhhhc--ccccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHH
Confidence 2 1 34566666651 111111 111112333344444 4555678888887776653 22 367899
Q ss_pred HHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhhcCcH
Q 007212 496 HAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWK 574 (612)
Q Consensus 496 EAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~ 574 (612)
|+++||.+.|++..-++.-++.+|..-. -..|..++.+.++.++..+. +.+..+.+.+.+...|+.+
T Consensus 282 eiagc~~~liT~~~~~~e~~f~pgk~~i------------v~~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~ 349 (373)
T COG4641 282 EIAGCGGFLITDYWKDLEKFFKPGKDII------------VYQDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYE 349 (373)
T ss_pred HHhhcCCccccccHHHHHHhcCCchheE------------EecCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHH
Confidence 9999999999998888888888876555 45899999999999999842 2344444444456669999
Q ss_pred HHHHHHHHHHHHHHH
Q 007212 575 GPAKKWEETLLNLEV 589 (612)
Q Consensus 575 ~~a~~~~~~y~~l~~ 589 (612)
.-+.++.+...++..
T Consensus 350 ~r~~~~~~~i~sI~~ 364 (373)
T COG4641 350 ERIFKLLNEIASINI 364 (373)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888888877776543
No 139
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.93 E-value=0.34 Score=50.36 Aligned_cols=164 Identities=15% Similarity=0.141 Sum_probs=109.1
Q ss_pred cEEEEEccC-ccccCHHHHHHHHHhcccCCeEEEE-EecC--ChhHHHHHHHHHHHC-C-CceEEEecc-ChHHHHHHHH
Q 007212 404 PVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIV-LGTG--KKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 476 (612)
Q Consensus 404 ~~i~~iGrl-~~~Kg~d~li~A~~~l~~~~~~lvi-vG~g--~~~~~~~l~~l~~~~-~-~~v~~~~~~-~~~~~~~i~~ 476 (612)
+.-+.+|+= ++.-++-.+++++++....++++++ +|-| .++|.+++.+.+.++ + +++.....+ +-++...+++
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~ 264 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLS 264 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHH
Confidence 455566664 5777888888888876557788766 3444 467888888888874 4 356555444 5566668999
Q ss_pred hccEEEEcCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 477 GADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 477 ~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
.||+.++.... .+.|+.++ .+.+|+||+.+....+-..+.+..--++| ..|.-|.+.+.++=+++..-.
T Consensus 265 ~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~~ipVlf--------~~d~L~~~~v~ea~rql~~~d- 334 (360)
T PF07429_consen 265 RCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQGIPVLF--------YGDELDEALVREAQRQLANVD- 334 (360)
T ss_pred hCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhCCCeEEe--------ccccCCHHHHHHHHHHHhhCc-
Confidence 99999999864 89999877 79999999998876555555554333444 124445555555544444321
Q ss_pred HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 556 TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 556 ~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
. + .-.|.-.+..+.|.+.+..+
T Consensus 335 k--------~--~iaFf~pny~~~w~~~l~~~ 356 (360)
T PF07429_consen 335 K--------Q--QIAFFAPNYLQGWRQALRLA 356 (360)
T ss_pred c--------c--ceeeeCCchHHHHHHHHHHH
Confidence 0 1 12366677777787777644
No 140
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=96.90 E-value=0.041 Score=58.78 Aligned_cols=199 Identities=14% Similarity=0.137 Sum_probs=96.9
Q ss_pred HHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHH
Q 007212 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 311 ~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (612)
........|.+++.|+...+.+.+. +|.+.+ .++..|..- ++. +.......++.
T Consensus 128 ~~~~~~~~d~~~~~s~~~~~~~~~~--f~~~~~--------~i~~~G~PR--~D~--------------l~~~~~~~~~~ 181 (369)
T PF04464_consen 128 YKRNYRNYDYFIVSSEFEKEIFKKA--FGYPED--------KILVTGYPR--NDY--------------LFNKSKENRNR 181 (369)
T ss_dssp HHHHHTT-SEEEESSHHHHHHHHHH--TT--GG--------GEEES--GG--GHH--------------HHHSTT-HHHH
T ss_pred hhhhccCCcEEEECCHHHHHHHHHH--hccCcc--------eEEEeCCCe--EhH--------------HhccCHHHHHH
Confidence 4456778999999999999988852 555533 344555531 100 00111122567
Q ss_pred HHHHhCCCCCCCCcEEEEEccCccccCH--------HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGS--------DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl~~~Kg~--------d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
+++.++++.+ +.+|+|+=.+...... ..-.+.+..+.+.++.+++-... ......... .....++..
T Consensus 182 i~~~~~~~~~--~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp--~~~~~~~~~-~~~~~~i~~ 256 (369)
T PF04464_consen 182 IKKKLGIDKD--KKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHP--NMKKKFKDF-KEDNSNIIF 256 (369)
T ss_dssp HHHHTT--SS---EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SH--HHHTT-----TT-TTTEEE
T ss_pred HHHHhccCCC--CcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCc--hhhhchhhh-hccCCcEEE
Confidence 8888888754 4699998666443322 11223333344468877776542 233333222 222334544
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc--CCCCcccceecCcceEEecccccccccCCCCCH
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA--STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV 540 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s--~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~ 540 (612)
.... ..+..++..||++|- -++-+++|++.+++|+|.- |..... + ..|+.+. +..++--....+.
T Consensus 257 ~~~~--~~~~~ll~~aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~----~-~rg~~~~-~~~~~pg~~~~~~ 323 (369)
T PF04464_consen 257 VSDN--EDIYDLLAAADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYE----K-ERGFYFD-YEEDLPGPIVYNF 323 (369)
T ss_dssp -TT---S-HHHHHHT-SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTT----T-TSSBSS--TTTSSSS-EESSH
T ss_pred CCCC--CCHHHHHHhcCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHh----h-ccCCCCc-hHhhCCCceeCCH
Confidence 3332 356689999999992 2567899999999999954 432111 1 1233221 0000000023689
Q ss_pred HHHHHHHHHHHHh
Q 007212 541 AAVSTTVRRALAT 553 (612)
Q Consensus 541 ~~la~~i~~ll~~ 553 (612)
++|.++|+.++++
T Consensus 324 ~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 324 EELIEAIENIIEN 336 (369)
T ss_dssp HHHHHHHTTHHHH
T ss_pred HHHHHHHHhhhhC
Confidence 9999999998876
No 141
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.87 E-value=0.029 Score=61.21 Aligned_cols=180 Identities=14% Similarity=0.066 Sum_probs=111.6
Q ss_pred HHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCC-hhHHHHHHHHHHHCC---CceEEEec
Q 007212 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYP---EKARGVAK 465 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~---~~v~~~~~ 465 (612)
|.++|||++. .++++.+ ...|-...+++...++.+ |+-.|++.|.|+ ++....+++++++.+ .++++.+.
T Consensus 421 R~~lglp~~a--vVf~c~~--n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLPEDA--VVFCCFN--NYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCCCCe--EEEEecC--CcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 7788999653 4444444 456665666666665555 888888888765 577888999988765 57788888
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc-----ccee-cCcceEEecccccccccCCCCC
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-----DTVE-EGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-----e~v~-~g~~G~~~~~~~~~~~~v~~~d 539 (612)
-..+....-+.-||+++=+.-+ +-..+.+||+.+|+||++-.-.-+. .++. -|..-+ |.. +
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~-----------vA~-s 563 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPEL-----------VAD-S 563 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchh-----------hcC-C
Confidence 7777666889999999955432 3456899999999999875321111 0111 111111 122 3
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH---H--HhhcCcHHHHHHHHHHHHHHHHc
Q 007212 540 VAAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 540 ~~~la~~i~~ll~~~~~~~~~~~~~~~---~--~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
.++.++.-..+-++ ...+++....- + ..-|+.+..+++++.+|.++..+
T Consensus 564 ~~dYV~~av~~g~d--ral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 564 RADYVEKAVAFGSD--RALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHHHHHHHHHhccc--HHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 33333333233333 22222221111 1 13588999999999999998754
No 142
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.81 E-value=0.15 Score=50.56 Aligned_cols=103 Identities=12% Similarity=0.014 Sum_probs=56.1
Q ss_pred CCcEEEEEccCccccCH--HHHHHHHHhccc----CCeEEEEEecCC--hhHHHHHHHHHHHCCCceEEEecc--ChHHH
Q 007212 402 NIPVIGFIGRLEEQKGS--DILAAAIPHFIK----ENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKF--NIPLA 471 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~--d~li~A~~~l~~----~~~~lvivG~g~--~~~~~~l~~l~~~~~~~v~~~~~~--~~~~~ 471 (612)
...+-+++|.-.++-.+ |...+.+..+.+ ....|++--+.. +.....++.--...+ ..+...- ...-.
T Consensus 161 rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~~~~s~l~~~l~s~~--~i~w~~~d~g~NPY 238 (329)
T COG3660 161 RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPDTVKSILKNNLNSSP--GIVWNNEDTGYNPY 238 (329)
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcHHHHHHHHhccccCc--eeEeCCCCCCCCch
Confidence 55788999986655443 333333333322 466776655432 333333333111112 1111111 11112
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
..+++.||.+|.+... =.-.-||.+.|+||.+--.
T Consensus 239 ~~~La~Adyii~TaDS---inM~sEAasTgkPv~~~~~ 273 (329)
T COG3660 239 IDMLAAADYIISTADS---INMCSEAASTGKPVFILEP 273 (329)
T ss_pred HHHHhhcceEEEecch---hhhhHHHhccCCCeEEEec
Confidence 3689999999987653 2336799999999976543
No 143
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=96.69 E-value=0.0036 Score=67.31 Aligned_cols=82 Identities=12% Similarity=0.193 Sum_probs=46.5
Q ss_pred CCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCc
Q 007212 227 GKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 227 ~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+.||+ ||.|.-..++++.++.... ++|.+++-|.+.-+. +..+++.+..+...++- ..
T Consensus 400 ~~Pdl-I~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLek~K-y~~s~~~w~e~e~~Yhf-------------s~ 457 (550)
T PF00862_consen 400 GKPDL-IIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLEKTK-YEDSDLYWKEIEEKYHF-------------SC 457 (550)
T ss_dssp S--SE-EEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-HHHH-HHTTTTTSHHHHHHH-H-------------HH
T ss_pred CCCcE-EEeccCcchHHHHHHHhhc-------CCceehhhhcccccc-ccccCCCHHHHHhhccc-------------hh
Confidence 46996 9999877888888888774 999999999774321 11111111111111100 12
Q ss_pred hhHHHHHHHhhCCEEEecCHHHHH
Q 007212 307 KINWMKAGILESDMVLTVSPHYAQ 330 (612)
Q Consensus 307 ~~~~~k~~l~~ad~vi~vS~~~~~ 330 (612)
.+.....+++.||.|||-+.....
T Consensus 458 qftAd~iamn~adfIItST~QEI~ 481 (550)
T PF00862_consen 458 QFTADLIAMNAADFIITSTYQEIA 481 (550)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHH
T ss_pred hhhHHHHHhhcCCEEEEcchHhhc
Confidence 344456688999999998765443
No 144
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.41 E-value=0.18 Score=53.28 Aligned_cols=90 Identities=19% Similarity=0.106 Sum_probs=58.8
Q ss_pred cEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.+.++.|.-. -.+-+..+++++.++.+...++++.|... . +.+++...+.. .+.+. . ....+++.||+.
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~-~~i~~~~~~~~-~~~~~----~-~~~~~m~~aDla 239 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--G-KDLKEIYGDIS-EFEIS----Y-DTHKALLEAEFA 239 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--H-HHHHHHHhcCC-CcEEe----c-cHHHHHHhhhHH
Confidence 3445555532 23566778899999876557788877654 2 34444333222 22222 1 234689999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
+..| |.+.+|++.+|+|.|+.
T Consensus 240 l~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 240 FICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred HhcC-----cHHHHHHHHhCCCEEEE
Confidence 8665 78888999999999874
No 145
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=96.37 E-value=0.02 Score=53.96 Aligned_cols=41 Identities=12% Similarity=0.253 Sum_probs=31.7
Q ss_pred HHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCc
Q 007212 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 363 (612)
Q Consensus 312 k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~ 363 (612)
-..+..||..++.|.+.++.+-.. + ..+|.||+-|||++.+
T Consensus 130 l~~l~~~D~~isPT~wQ~~~fP~~----------~-r~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 130 LLALEQADAGISPTRWQRSQFPAE----------F-RSKISVIHDGIDTDRF 170 (171)
T ss_pred HHHHHhCCcCcCCCHHHHHhCCHH----------H-HcCcEEeecccchhhc
Confidence 335678999999999988876541 1 1399999999998754
No 146
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.06 E-value=0.32 Score=56.10 Aligned_cols=264 Identities=19% Similarity=0.223 Sum_probs=160.0
Q ss_pred CcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchh
Q 007212 229 KNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI 308 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (612)
.| ++..||+|..++|-+++... .++++-+..|...+.- ..+..+- ..
T Consensus 141 ~d-~vwihdyhlmllp~~lr~~~------~~~~ig~flhspfpss----Ei~r~lp----------------------~r 187 (732)
T KOG1050|consen 141 GD-IVWIHDYHLMLLPQMLRERF------NSAKIGFFLHSPFPSS----EIYRCLP----------------------VR 187 (732)
T ss_pred CC-cEEEEcchhhccchhhhccc------ccceEEEeccCCCChH----HHHHhcc----------------------cH
Confidence 37 58999999999998888764 4777778888432211 0011110 11
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCc--CCCccch---------hhhhccCeEEeeCCccCCCcCCCcccccccccCc
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD---------NIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 377 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~G~~~~---------~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~ 377 (612)
.-+-.++..+|.+-..+..++..+.+.. ..|.+.. ..-+...+..+|-|+|+..+.-....
T Consensus 188 ~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~-------- 259 (732)
T KOG1050|consen 188 KEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRDVSVKALPIGIDVQRFVKLLEL-------- 259 (732)
T ss_pred HHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccceeeeeecccccchHHhhccccc--------
Confidence 1123345566666666666665544311 0111111 00122356778888888776433210
Q ss_pred chhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc------CCeEEEEEecCC----hh---
Q 007212 378 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KP--- 444 (612)
Q Consensus 378 ~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~------~~~~lvivG~g~----~~--- 444 (612)
.....-..+++..+ .++.+|+-+-|++.-||+..=+.|+.++.+ ..+.++.+..+. ++
T Consensus 260 ----~~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~ 330 (732)
T KOG1050|consen 260 ----PYVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEE 330 (732)
T ss_pred ----hhHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHH
Confidence 00001122333333 255789999999999999888888887765 245555554432 22
Q ss_pred HHHHHHHHHHH----CCC----ceE-EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcC----CceEEcCCCC
Q 007212 445 MEKQLEQLEIL----YPE----KAR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG----TVPIVASTGG 511 (612)
Q Consensus 445 ~~~~l~~l~~~----~~~----~v~-~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G----~PvI~s~~gg 511 (612)
+...+..+..+ +.. .+. ..-.++..++-+.+.-+|+.++.+..+|..++.+|+..|. .+.|.+..-|
T Consensus 331 ~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G 410 (732)
T KOG1050|consen 331 LKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIG 410 (732)
T ss_pred HHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEeeecc
Confidence 23333333322 221 121 2223356666689999999999999999999999999873 6678888777
Q ss_pred cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007212 512 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 512 ~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
-.++.+++. . ++.|-|.++++..|..+++.+
T Consensus 411 ~~~tl~d~a---i---------vvnpw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 411 DDTTLEDAA---I---------VVNPWDGDEFAILISKALTMS 441 (732)
T ss_pred ccccccccC---E---------EECCcchHHHHHHHHHHhhcC
Confidence 777775543 2 248999999999999999984
No 147
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=95.36 E-value=4.3 Score=42.41 Aligned_cols=136 Identities=13% Similarity=0.221 Sum_probs=74.2
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhccc-CCe---EEEEEecCC-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK-ENV---QIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~---~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 477 (612)
..+++.+|. -+-|-+.+..++..... +++ -++|.|.-- ....+++...+.+.| ++.. ..|..+. .+++++
T Consensus 220 ~~Ilvs~GG--G~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p-~i~I-~~f~~~~-~~ll~g 294 (400)
T COG4671 220 FDILVSVGG--GADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRP-HISI-FEFRNDF-ESLLAG 294 (400)
T ss_pred ceEEEecCC--ChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCC-CeEE-EEhhhhH-HHHHHh
Confidence 357777774 34454444444443322 333 355666532 334455555555444 3543 3444433 369999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc-c-ceec---CcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-D-TVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e-~v~~---g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
|+..|.-.-+ ++..|-++.|+|.+.-....-. | ++.. ..-|+. |..+-+.-.++.|+++|..++.
T Consensus 295 A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~------dvL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 295 ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLV------DVLLPENLTPQNLADALKAALA 364 (400)
T ss_pred hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcc------eeeCcccCChHHHHHHHHhccc
Confidence 9999965543 5688999999998655432222 2 2221 122321 0001133457889999988887
Q ss_pred h
Q 007212 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
-
T Consensus 365 ~ 365 (400)
T COG4671 365 R 365 (400)
T ss_pred C
Confidence 4
No 148
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=94.96 E-value=1.4 Score=44.40 Aligned_cols=88 Identities=16% Similarity=0.277 Sum_probs=56.4
Q ss_pred EEEEEccCccccCHHHHHHHHHhcccCCeEEE-EEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
+++..|.-+ .|+ +..+.++.|.+.++.+. ++|.+.+.+.+ +.+....++ ++..+ .+.+.+..++..||..+.
T Consensus 161 ilI~lGGsD-pk~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~~-l~k~~~~~~-~i~~~--~~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGSD-PKN--LTLKVLAELEQKNVNLHIVVGSSNPTLKN-LRKRAEKYP-NINLY--IDTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCCC-hhh--hHHHHHHHhhccCeeEEEEecCCCcchhH-HHHHHhhCC-CeeeE--ecchhHHHHHHhcchhee
Confidence 566666544 344 55667777765454444 34655554444 444555555 34433 345666789999999985
Q ss_pred cCCCCCCcHHHHHHHHcCCce
Q 007212 484 PSRFEPCGLIQLHAMRYGTVP 504 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~Pv 504 (612)
. -|.++.||...|+|.
T Consensus 234 A-----aGstlyEa~~lgvP~ 249 (318)
T COG3980 234 A-----AGSTLYEALLLGVPS 249 (318)
T ss_pred c-----cchHHHHHHHhcCCc
Confidence 3 589999999999994
No 149
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=94.81 E-value=0.52 Score=49.09 Aligned_cols=104 Identities=16% Similarity=0.060 Sum_probs=67.9
Q ss_pred cEEEEEccCcccc--CHH---HHHHHHHhccc-CCeEEEEEecC--ChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007212 404 PVIGFIGRLEEQK--GSD---ILAAAIPHFIK-ENVQIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 404 ~~i~~iGrl~~~K--g~d---~li~A~~~l~~-~~~~lvivG~g--~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 475 (612)
.+.+.+|.=.... +.+ .+++.+..+.+ .+.++.|..+. +++.++.+.++....+ .+.++..-...-...++
T Consensus 148 ~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~-~~~~~~~~~~nPy~~~L 226 (311)
T PF06258_consen 148 RVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNP-GVYIWDGTGENPYLGFL 226 (311)
T ss_pred eEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCC-ceEEecCCCCCcHHHHH
Confidence 4667788643322 333 56666666554 46788887763 3567777777765444 34333222222244799
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC
Q 007212 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg 511 (612)
+.||.++++.. .-.-+-||.+.|+||.+-...+
T Consensus 227 a~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 227 AAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 99999999876 3345899999999999888765
No 150
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=94.68 E-value=5.5 Score=40.17 Aligned_cols=137 Identities=14% Similarity=0.147 Sum_probs=75.0
Q ss_pred EEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCC-hhHHHHHHH--------------HHHHCCCceEEEeccChHH
Q 007212 407 GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGK-KPMEKQLEQ--------------LEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 407 ~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~-~~~~~~l~~--------------l~~~~~~~v~~~~~~~~~~ 470 (612)
.|+||....||+..+++.-++..+ ++..-++-|-.. ......++. ....-..-+..++.+-.++
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~~~~~~pN~~~~v~~~Yi~~E 266 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCDEPKPAPNSPVPVYGPYIRSE 266 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGGG---SSS--EEEESS--HHH
T ss_pred eeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCccccccCcccCCCCcceecchhhhHH
Confidence 899999999999999999988766 678888877422 111111111 1111112355566676666
Q ss_pred HHHHHHhccEEEEcCCC------CCCcHHHHHHHHcCCceEEc-CCCCccc-------ceecCcceEEecccccccccCC
Q 007212 471 AHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVA-STGGLVD-------TVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~------E~~gl~~lEAma~G~PvI~s-~~gg~~e-------~v~~g~~G~~~~~~~~~~~~v~ 536 (612)
.-..++.+-+...-+.. +.+-.+.+|..|||+.+|-- ++|.... .+.+....+. +|
T Consensus 267 ~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~~I~----------~D 336 (355)
T PF11440_consen 267 GLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYSAIY----------FD 336 (355)
T ss_dssp HHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S-EE----------E-
T ss_pred HHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcceeE----------ec
Confidence 66788888888777652 45778999999999977755 3444333 2222222333 38
Q ss_pred CCCHHHHHHHHHHHHHh
Q 007212 537 PVDVAAVSTTVRRALAT 553 (612)
Q Consensus 537 ~~d~~~la~~i~~ll~~ 553 (612)
..|.++-.+.|.++.++
T Consensus 337 e~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 337 ENDLESTVEKLIEVANN 353 (355)
T ss_dssp TTSHHHHHHHHHHHHT-
T ss_pred cchHHHHHHHHHHHhcc
Confidence 88888877777776554
No 151
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=94.62 E-value=0.057 Score=55.00 Aligned_cols=43 Identities=16% Similarity=0.317 Sum_probs=35.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
|+|++|+...+|+ ..||++.-+.+|.+.|-+.-..|..++++.
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~~ 43 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGANP 43 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCCc
Confidence 8999999999995 789999999999998877656666666663
No 152
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=93.32 E-value=0.96 Score=47.46 Aligned_cols=112 Identities=18% Similarity=0.166 Sum_probs=70.3
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcc-CccccCH--HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceE-EE
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGR-LEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-GV 463 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGr-l~~~Kg~--d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~-~~ 463 (612)
.+.+..+++++.+ +..+++..|. ..+.|.+ +...+.+..+.+.+.+++++|+.. ..+..+++....+..+. ..
T Consensus 161 ~~~~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~--e~~~~~~i~~~~~~~~~~l~ 237 (334)
T TIGR02195 161 QAAALAKFGLDTE-RPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAK--DHPAGNEIEALLPGELRNLA 237 (334)
T ss_pred HHHHHHHcCCCCC-CCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChh--hHHHHHHHHHhCCcccccCC
Confidence 3445566666532 2245556665 3466654 477777777766678999999754 23334455444443332 33
Q ss_pred eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
+..+-.++..+++.||++|-.-. ..+-=|.|.|+|+|+-
T Consensus 238 g~~sL~el~ali~~a~l~I~~DS-----Gp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 238 GETSLDEAVDLIALAKAVVTNDS-----GLMHVAAALNRPLVAL 276 (334)
T ss_pred CCCCHHHHHHHHHhCCEEEeeCC-----HHHHHHHHcCCCEEEE
Confidence 45566777789999999996553 3344478999999864
No 153
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=92.68 E-value=0.28 Score=41.67 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=58.4
Q ss_pred EEEEecCChhHHHHHHHHHHHCCCceEEE---eccChHH--HHHHHHhccEEEEcCCC---CCCcHHHHHHHHcCCceEE
Q 007212 435 IIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPL--AHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTVPIV 506 (612)
Q Consensus 435 lvivG~g~~~~~~~l~~l~~~~~~~v~~~---~~~~~~~--~~~i~~~aDv~v~pS~~---E~~gl~~lEAma~G~PvI~ 506 (612)
++|+|. .+.+...++++..+++.++..+ .++.... ++..+..||++|++..+ ..+-.+--+|-..|+|++.
T Consensus 2 vliVGG-~~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGG-REDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcC-CcccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 467775 1226777888888888777777 5555554 77889999999999876 3455567778899999999
Q ss_pred cCCCCcccc
Q 007212 507 ASTGGLVDT 515 (612)
Q Consensus 507 s~~gg~~e~ 515 (612)
+...|...+
T Consensus 81 ~~~~~~~~l 89 (97)
T PF10087_consen 81 SRSRGVSSL 89 (97)
T ss_pred ECCCCHHHH
Confidence 986665543
No 154
>PLN02448 UDP-glycosyltransferase family protein
Probab=92.62 E-value=2.3 Score=46.96 Aligned_cols=134 Identities=13% Similarity=0.059 Sum_probs=74.4
Q ss_pred CcEEEEEccCcc--ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl~~--~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
..+++..|.... ..-+..++++++. .+..++++..++. ..+.+. .+++.....+.+.. .++++.++
T Consensus 275 ~vvyvsfGs~~~~~~~~~~~~~~~l~~---~~~~~lw~~~~~~---~~~~~~---~~~~~~v~~w~pQ~---~iL~h~~v 342 (459)
T PLN02448 275 SVLYVSLGSFLSVSSAQMDEIAAGLRD---SGVRFLWVARGEA---SRLKEI---CGDMGLVVPWCDQL---KVLCHSSV 342 (459)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCch---hhHhHh---ccCCEEEeccCCHH---HHhccCcc
Confidence 357777887642 2224455555554 4778887665431 112121 22334444433433 37888887
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
..+-+. +=-++++||+.+|+|+|+-...+ ....+.+. +.|+-+... .+ .-...+.+++++++++++.+
T Consensus 343 ~~fvtH--gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~-~~--~~~~~~~~~l~~av~~vl~~ 415 (459)
T PLN02448 343 GGFWTH--CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKRE-VG--EETLVGREEIAELVKRFMDL 415 (459)
T ss_pred ceEEec--CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecc-cc--cCCcCcHHHHHHHHHHHhcC
Confidence 443343 22357999999999999876533 33344332 345543100 00 00124779999999999975
No 155
>PLN02670 transferase, transferring glycosyl groups
Probab=92.47 E-value=2.6 Score=46.65 Aligned_cols=170 Identities=12% Similarity=0.056 Sum_probs=88.2
Q ss_pred CcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCCh--------hHHHHHHHHHHHCCCceEEEeccChHHHH
Q 007212 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKK--------PMEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 403 ~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~--------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~ 472 (612)
..+++..|.+. ...-+..|+.++... ...|+++=..+. .+-+.+.+-... ..+....+.++.
T Consensus 279 sVvyvsfGS~~~l~~~q~~ela~gl~~s---~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~--rG~vv~~W~PQ~--- 350 (472)
T PLN02670 279 SVVYVALGTEASLRREEVTELALGLEKS---ETPFFWVLRNEPGTTQNALEMLPDGFEERVKG--RGMIHVGWVPQV--- 350 (472)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCcccccchhhcCChHHHHhccC--CCeEEeCcCCHH---
Confidence 46777788875 344555555666555 335555433210 011111111111 113323343443
Q ss_pred HHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCC----CCcccceecCcceEEecccccccccCCCCCHHHHHHHH
Q 007212 473 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVAST----GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~----gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i 547 (612)
.++++..+..+-+. || ++++||+++|+|+|+... ......+.+-+.|..+.....+ ..-+.+++.++|
T Consensus 351 ~IL~H~~v~~FvtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~----~~~~~e~i~~av 423 (472)
T PLN02670 351 KILSHESVGGFLTH---CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD----GSFTSDSVAESV 423 (472)
T ss_pred HHhcCcccceeeec---CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC----CcCcHHHHHHHH
Confidence 37888777554454 54 479999999999998764 3334444445677754110000 113689999999
Q ss_pred HHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHH
Q 007212 548 RRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 548 ~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l 587 (612)
++++.+..-+.+++.+++. +...=+-+..++.+++.+.+.
T Consensus 424 ~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 424 RLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 9999763112333222221 233344455555555555443
No 156
>PLN02562 UDP-glycosyltransferase
Probab=92.46 E-value=2 Score=47.15 Aligned_cols=128 Identities=10% Similarity=0.027 Sum_probs=75.8
Q ss_pred cEEEEEccCc---cccCHHHHHHHHHhcccCCeEEEE-EecCCh-hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 404 PVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 404 ~~i~~iGrl~---~~Kg~d~li~A~~~l~~~~~~lvi-vG~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
.+++..|... +.+-+..++.+++++ ..+|++ +..+.. .+.+.+. ...++++....+.+... ++++.
T Consensus 275 vvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~~~~---~~~~~~~~v~~w~PQ~~---iL~h~ 345 (448)
T PLN02562 275 VIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPPGYV---ERVSKQGKVVSWAPQLE---VLKHQ 345 (448)
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCHHHH---HHhccCEEEEecCCHHH---HhCCC
Confidence 5777888864 444566666666665 446554 332211 1211111 12234455444444443 78887
Q ss_pred cEEEEcCCCCCCc-HHHHHHHHcCCceEEcCC----CCcccceec-CcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCG-LIQLHAMRYGTVPIVAST----GGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 Dv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~----gg~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
++..+-+. || ++.+||+.+|+|+|+... ......+.+ -..|+.+ ...+.++++++|++++.
T Consensus 346 ~v~~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~----------~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 346 AVGCYLTH---CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----------SGFGQKEVEEGLRKVME 412 (448)
T ss_pred ccceEEec---CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe----------CCCCHHHHHHHHHHHhC
Confidence 76554454 44 479999999999998754 333444433 2456643 34578999999999997
Q ss_pred h
Q 007212 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 413 ~ 413 (448)
T PLN02562 413 D 413 (448)
T ss_pred C
Confidence 6
No 157
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=92.05 E-value=0.61 Score=43.40 Aligned_cols=35 Identities=17% Similarity=0.193 Sum_probs=24.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+++.+++ .|--......|+..+ -|+++++|-.
T Consensus 1 M~ILlle~y~-----ggSHk~~~~~L~~~~---~~~~~lltLP 35 (168)
T PF12038_consen 1 MRILLLEPYY-----GGSHKQWADGLAAHS---EHEWTLLTLP 35 (168)
T ss_pred CeEEEEcccc-----ccCHHHHHHHHHHhc---cCCEEEEEcC
Confidence 9999999875 344454555555554 4899999853
No 158
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=91.97 E-value=0.8 Score=43.09 Aligned_cols=27 Identities=19% Similarity=0.292 Sum_probs=23.4
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchh
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDN 344 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~ 344 (612)
-..+|..++.|+..++++.+ .|++.++
T Consensus 135 ~~~~D~y~Vase~~~~~l~~---~Gi~~~~ 161 (169)
T PF06925_consen 135 HPGVDRYFVASEEVKEELIE---RGIPPER 161 (169)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChhH
Confidence 34789999999999999997 8998773
No 159
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=90.56 E-value=2.3 Score=42.33 Aligned_cols=102 Identities=14% Similarity=0.035 Sum_probs=61.8
Q ss_pred CCcEEEEEccCccccCHH--HHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCC-ceEEEeccChHHHHHHHHhc
Q 007212 402 NIPVIGFIGRLEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d--~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~~~~~~~~~~~i~~~a 478 (612)
+..+++..|.-.+.|.+. ...+.+..+.+...+++++|.+.+..++..+++....+. .+...+..+-.++..+++.|
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a 184 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRA 184 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTS
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcC
Confidence 345677777767777654 488888888766688999998764334455555544432 34455556777777899999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
|++|-+-. ..+-=|.+.|+|+|+-=
T Consensus 185 ~~~I~~Dt-----g~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 185 DLVIGNDT-----GPMHLAAALGTPTVALF 209 (247)
T ss_dssp SEEEEESS-----HHHHHHHHTT--EEEEE
T ss_pred CEEEecCC-----hHHHHHHHHhCCEEEEe
Confidence 99997654 33444889999998763
No 160
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=90.32 E-value=1.9 Score=44.00 Aligned_cols=98 Identities=17% Similarity=0.224 Sum_probs=64.0
Q ss_pred EEEEEccCcccc--CHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhccE
Q 007212 405 VIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~i~~iGrl~~~K--g~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~--~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
+++..|.-.+.| ..+...+.++.+.+.+++++++|..+ .++..+++.... +..+...+..+-.++..+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 455565555555 45788888888876689999998755 334445554443 122333444455677789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+|-+.. |..-+ |.+.|+|+|+--.
T Consensus 202 ~I~~Ds----g~~Hl-A~a~~~p~i~l~g 225 (279)
T cd03789 202 VVTNDS----GPMHL-AAALGTPTVALFG 225 (279)
T ss_pred EEeeCC----HHHHH-HHHcCCCEEEEEC
Confidence 997653 44444 5699999987643
No 161
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=90.15 E-value=3.7 Score=43.44 Aligned_cols=101 Identities=13% Similarity=-0.014 Sum_probs=64.6
Q ss_pred CcEEEEEccCccccC--HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc
Q 007212 403 IPVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg--~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~a 478 (612)
..+++..|.-.+.|. .+...+.++.|.+.+.+++++|...+...+..+++..... ..+...+..+-.++..+++.|
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a 263 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDHA 263 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHhC
Confidence 356677777666775 4467777777766688999987644222233344443321 123334555667777899999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
|++|-.-. | .+-=|-|.|+|+|+--
T Consensus 264 ~l~v~nDS----G-p~HlAaA~g~P~v~lf 288 (352)
T PRK10422 264 QLFIGVDS----A-PAHIAAAVNTPLICLF 288 (352)
T ss_pred CEEEecCC----H-HHHHHHHcCCCEEEEE
Confidence 99996543 3 3344779999998653
No 162
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=89.75 E-value=0.081 Score=49.57 Aligned_cols=91 Identities=14% Similarity=0.187 Sum_probs=51.5
Q ss_pred ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCcceEEeccccc
Q 007212 459 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSV 530 (612)
Q Consensus 459 ~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~~~~~~~~ 530 (612)
++..+...+ .+..+++.||++|.-. =+.++.|++++|+|.|+-...+ ....+.+...|..+
T Consensus 56 ~v~~~~~~~--~m~~~m~~aDlvIs~a----G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~----- 124 (167)
T PF04101_consen 56 NVKVFGFVD--NMAELMAAADLVISHA----GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML----- 124 (167)
T ss_dssp CCEEECSSS--SHHHHHHHHSEEEECS-----CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS-----
T ss_pred cEEEEechh--hHHHHHHHcCEEEeCC----CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc-----
Confidence 455444432 2557999999988422 2478999999999998766554 12223333334432
Q ss_pred ccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH
Q 007212 531 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 565 (612)
Q Consensus 531 ~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~ 565 (612)
.-...+.+.|.++|..++++ +....++..+
T Consensus 125 ---~~~~~~~~~L~~~i~~l~~~--~~~~~~~~~~ 154 (167)
T PF04101_consen 125 ---DESELNPEELAEAIEELLSD--PEKLKEMAKA 154 (167)
T ss_dssp ---ECCC-SCCCHHHHHHCHCCC--HH-SHHHCCC
T ss_pred ---CcccCCHHHHHHHHHHHHcC--cHHHHHHHHH
Confidence 01223467899999998887 4444444433
No 163
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=89.11 E-value=6.4 Score=41.45 Aligned_cols=99 Identities=12% Similarity=0.045 Sum_probs=63.2
Q ss_pred cEEEEEccCccccC--HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCC-Cce-EEEeccChHHHHHHHHhcc
Q 007212 404 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKA-RGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg--~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~v-~~~~~~~~~~~~~i~~~aD 479 (612)
.+++..|.-.+.|. .+...+.+..+.+.+.+++++|...+...+..+++....+ .++ ...+..+-.++..+++.||
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~ 262 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHAR 262 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCC
Confidence 45566666556664 4567777777755678999998654222233444443332 123 2445556677778999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
++|-.-. ..+-=|.|.|+|+|+-
T Consensus 263 l~Vs~DS-----Gp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 263 LFIGVDS-----VPMHMAAALGTPLVAL 285 (344)
T ss_pred EEEecCC-----HHHHHHHHcCCCEEEE
Confidence 9996643 3344488999999875
No 164
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=88.90 E-value=11 Score=39.17 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=64.0
Q ss_pred cEEEEEccCccccCH--HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~--d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.++++.|.=.+.|.+ +...+.+..+.+.+.+++++|.++. ..+..+++....+. ....+..+-.++..+++.||++
T Consensus 181 ~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~~a~l~ 258 (319)
T TIGR02193 181 YAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EKQRAERIAEALPG-AVVLPKMSLAEVAALLAGADAV 258 (319)
T ss_pred EEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHhhCCC-CeecCCCCHHHHHHHHHcCCEE
Confidence 466677765567765 5777777777656788888854442 22334455544443 2344556667777899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
|-.-. ..+-=|-+.|+|+|+-=
T Consensus 259 I~~DS-----gp~HlAaa~g~P~i~lf 280 (319)
T TIGR02193 259 VGVDT-----GLTHLAAALDKPTVTLY 280 (319)
T ss_pred EeCCC-----hHHHHHHHcCCCEEEEE
Confidence 96553 23334778999998653
No 165
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=88.79 E-value=6.4 Score=43.29 Aligned_cols=134 Identities=16% Similarity=0.090 Sum_probs=72.2
Q ss_pred CcEEEEEccCcc--ccCHHHHHHHHHhcccCCeEEEEEec-C----ChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007212 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGT-G----KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 403 ~~~i~~iGrl~~--~Kg~d~li~A~~~l~~~~~~lvivG~-g----~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 475 (612)
..+++..|.+.. .+-+..+..+++.. ...|+++=. + .......-....++.+++.....+.+... ++
T Consensus 265 sVvyvsfGS~~~~~~~q~~ela~gLe~s---~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~---iL 338 (451)
T PLN02410 265 SVIFVSLGSLALMEINEVMETASGLDSS---NQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKE---VL 338 (451)
T ss_pred cEEEEEccccccCCHHHHHHHHHHHHhc---CCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHH---Hh
Confidence 467777888752 33344444444443 335554422 1 11000001111222233444444444443 78
Q ss_pred HhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecC-cceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 476 AGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
++.++..+-+. || ++++||+++|+|+|+.... .....+.+. +.|+.+. ..-+.++++++|++
T Consensus 339 ~h~~v~~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~---------~~~~~~~v~~av~~ 406 (451)
T PLN02410 339 SHPAVGGFWSH---CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE---------GDLDRGAVERAVKR 406 (451)
T ss_pred CCCccCeeeec---CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC---------CcccHHHHHHHHHH
Confidence 88666433343 44 4799999999999987542 333444333 4676541 23477899999999
Q ss_pred HHHhh
Q 007212 550 ALATY 554 (612)
Q Consensus 550 ll~~~ 554 (612)
++.+.
T Consensus 407 lm~~~ 411 (451)
T PLN02410 407 LMVEE 411 (451)
T ss_pred HHcCC
Confidence 99763
No 166
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=88.16 E-value=2.2 Score=47.50 Aligned_cols=126 Identities=17% Similarity=0.135 Sum_probs=71.4
Q ss_pred CCcEEEEEccCcc---ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 402 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~i~~iGrl~~---~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
+..+++..|.+.. .+-.+.+++|++++ +. ++++.-++... .. .+.++....+.++. ++++..
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~--~~-~~iW~~~~~~~-----~~----l~~n~~~~~W~PQ~---~lL~hp 340 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENL--PQ-RFIWKYEGEPP-----EN----LPKNVLIVKWLPQN---DLLAHP 340 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCS--TT-EEEEEETCSHG-----CH----HHTTEEEESS--HH---HHHTST
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhC--CC-ccccccccccc-----cc----ccceEEEeccccch---hhhhcc
Confidence 3467777888752 22245567777766 33 77776655311 11 22346555555544 478776
Q ss_pred cEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 479 DFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 479 Dv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
.+-++=+. +| .+++||+.+|+|+|+-..- .....+.+-+.|.... ...-+.+++.++|++++++
T Consensus 341 ~v~~fitH---gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~--------~~~~~~~~l~~ai~~vl~~ 409 (500)
T PF00201_consen 341 RVKLFITH---GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLD--------KNDLTEEELRAAIREVLEN 409 (500)
T ss_dssp TEEEEEES-----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEG--------GGC-SHHHHHHHHHHHHHS
T ss_pred cceeeeec---cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEE--------ecCCcHHHHHHHHHHHHhh
Confidence 66544444 44 4799999999999997642 2333444445676541 1223568999999999998
No 167
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=87.94 E-value=11 Score=39.75 Aligned_cols=98 Identities=20% Similarity=0.204 Sum_probs=69.7
Q ss_pred cEEEEEc-cCccccCH--HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 404 PVIGFIG-RLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 404 ~~i~~iG-rl~~~Kg~--d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
.+++..| .-...|.+ +...+.+..+.+...++++.|.. +.++..+++...+++.+...+.-+-.++..+++.||+
T Consensus 177 ~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~--~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 177 YIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP--DEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred eEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh--HHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 4566677 55566654 47777777777767899999977 3666777787777643334555566777789999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+|-+.. |.. -=|-|.|+|+|+--
T Consensus 255 ~I~~DS----g~~-HlAaA~~~P~I~iy 277 (334)
T COG0859 255 VIGNDS----GPM-HLAAALGTPTIALY 277 (334)
T ss_pred EEccCC----hHH-HHHHHcCCCEEEEE
Confidence 996654 333 33889999998764
No 168
>PLN03004 UDP-glycosyltransferase
Probab=87.78 E-value=7.1 Score=42.96 Aligned_cols=137 Identities=12% Similarity=0.000 Sum_probs=76.8
Q ss_pred CcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCCh-------hHHHHH-HHHHHHC-CCceEEEeccChHHH
Q 007212 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQL-EQLEILY-PEKARGVAKFNIPLA 471 (612)
Q Consensus 403 ~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~-------~~~~~l-~~l~~~~-~~~v~~~~~~~~~~~ 471 (612)
..+++..|.+. +.+-+..|..+++.. ...|+++=..+. .....+ +...++. +.++....+.++..
T Consensus 271 sVvyvsfGS~~~~~~~q~~ela~gL~~s---~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~- 346 (451)
T PLN03004 271 SVVFLCFGSLGLFSKEQVIEIAVGLEKS---GQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP- 346 (451)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH-
Confidence 36777788873 344555666666655 335555443221 011101 0111111 12354444555543
Q ss_pred HHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCC----CCccccee-cCcceEEecccccccccCCCCCHHHHHH
Q 007212 472 HMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVAST----GGLVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~----gg~~e~v~-~g~~G~~~~~~~~~~~~v~~~d~~~la~ 545 (612)
+++++++..+-+. || ++++||+++|+|+|+... ......+. +-+.|..+... + -..-+.+++++
T Consensus 347 --iL~H~~v~~FvTH---~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~--~---~~~~~~e~l~~ 416 (451)
T PLN03004 347 --VLNHKAVGGFVTH---CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES--E---TGFVSSTEVEK 416 (451)
T ss_pred --HhCCCccceEecc---CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC--c---CCccCHHHHHH
Confidence 7999998555454 44 479999999999998754 33444443 33567654100 0 00237789999
Q ss_pred HHHHHHHh
Q 007212 546 TVRRALAT 553 (612)
Q Consensus 546 ~i~~ll~~ 553 (612)
+|++++.+
T Consensus 417 av~~vm~~ 424 (451)
T PLN03004 417 RVQEIIGE 424 (451)
T ss_pred HHHHHhcC
Confidence 99999975
No 169
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=87.73 E-value=22 Score=36.56 Aligned_cols=100 Identities=14% Similarity=0.002 Sum_probs=58.9
Q ss_pred cEEEEEccCc---cccCHHHHHHHHHhcccC-CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 404 PVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~i~~iGrl~---~~Kg~d~li~A~~~l~~~-~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
+.|++.-|-. .....+.+.+++..+.+. +.+++++.-....-.+..+++....+.........+.++.-.+++.||
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~ 252 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASAR 252 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCC
Confidence 4555544431 223466778888887653 777766553222223444555555433222233445666667999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
++|-... =..+=|+.+|+|+|+-+
T Consensus 253 ~vI~~Rl-----H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 253 LVIGMRL-----HALILAAAAGVPFVALS 276 (298)
T ss_pred EEEEech-----HHHHHHHHcCCCEEEee
Confidence 7774443 24566999999999664
No 170
>PLN02210 UDP-glucosyl transferase
Probab=87.51 E-value=9.1 Score=42.19 Aligned_cols=138 Identities=11% Similarity=0.091 Sum_probs=74.1
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEE-ecCC-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lviv-G~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
..+++..|.+... ..+.+-+.+..|...+.+|+++ +... ......+.+... +++.... .+-++. .+++++++
T Consensus 270 svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~--~~~g~v~-~w~PQ~--~iL~h~~v 343 (456)
T PLN02210 270 SVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK--EGQGVVL-EWSPQE--KILSHMAI 343 (456)
T ss_pred ceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc--CCCeEEE-ecCCHH--HHhcCcCc
Confidence 3677778887532 3344444444444446666653 3211 111112222211 1223223 343333 37888885
Q ss_pred EEEcCCCCCCcH-HHHHHHHcCCceEEcCCCC----cccceec-CcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 481 ILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 481 ~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
..+-+. ||. +++||+.+|+|+|+-...+ ....+.+ -+.|..+.....+ ..-+.++++++|++++.+
T Consensus 344 g~FitH---~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~----~~~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 344 SCFVTH---CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVD----GELKVEEVERCIEAVTEG 415 (456)
T ss_pred CeEEee---CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccC----CcCCHHHHHHHHHHHhcC
Confidence 444444 443 7999999999999876432 3334444 3567654210000 124778999999999976
No 171
>PLN03007 UDP-glucosyltransferase family protein
Probab=86.76 E-value=8.4 Score=42.79 Aligned_cols=137 Identities=15% Similarity=0.072 Sum_probs=72.1
Q ss_pred CcEEEEEccCcc--ccCHHHHHHHHHhcccCCeEEEE-EecCCh------hHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007212 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIV-LGTGKK------PMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 403 ~~~i~~iGrl~~--~Kg~d~li~A~~~l~~~~~~lvi-vG~g~~------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 473 (612)
..+++..|.... .+.+..++++++.+ +.+|++ ++.... .+.+.+.+.. .+.++....+.+.. .
T Consensus 286 svvyvsfGS~~~~~~~~~~~~~~~l~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~--~~~g~~v~~w~PQ~---~ 357 (482)
T PLN03007 286 SVIYLSFGSVASFKNEQLFEIAAGLEGS---GQNFIWVVRKNENQGEKEEWLPEGFEERT--KGKGLIIRGWAPQV---L 357 (482)
T ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHHC---CCCEEEEEecCCcccchhhcCCHHHHHHh--ccCCEEEecCCCHH---H
Confidence 367778888743 34444455554444 555554 342110 0111111111 13345544555554 4
Q ss_pred HHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CcceEEecccc---cccccCCCCCHHHHH
Q 007212 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFS---VDCEAVDPVDVAAVS 544 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~~~---~~~~~v~~~d~~~la 544 (612)
+++++++-.+-+. || ++++||+.+|+|+|+....+ ....+.+ -..|+-++... .+ -..-+.++++
T Consensus 358 iL~h~~v~~fvtH---~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~---~~~~~~~~l~ 431 (482)
T PLN03007 358 ILDHQATGGFVTH---CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVK---GDFISREKVE 431 (482)
T ss_pred HhccCccceeeec---CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccc---cCcccHHHHH
Confidence 7888887444444 33 47999999999999876432 2222221 12343221000 00 0124688999
Q ss_pred HHHHHHHHh
Q 007212 545 TTVRRALAT 553 (612)
Q Consensus 545 ~~i~~ll~~ 553 (612)
++|++++.+
T Consensus 432 ~av~~~m~~ 440 (482)
T PLN03007 432 KAVREVIVG 440 (482)
T ss_pred HHHHHHhcC
Confidence 999999976
No 172
>PLN00164 glucosyltransferase; Provisional
Probab=86.34 E-value=19 Score=39.90 Aligned_cols=75 Identities=16% Similarity=0.028 Sum_probs=46.5
Q ss_pred HHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCC----CCcccce-ecCcceEEecccccccccCCCCCHHHHHHH
Q 007212 473 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVAST----GGLVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~----gg~~e~v-~~g~~G~~~~~~~~~~~~v~~~d~~~la~~ 546 (612)
.++++.++..+-+. || ++.+||+.+|+|+|+-.. ......+ +.-+.|+.+.....+ -..-+.++++++
T Consensus 351 ~iL~h~~vg~fvtH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~---~~~~~~e~l~~a 424 (480)
T PLN00164 351 EILAHAAVGGFVTH---CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKR---DNFVEAAELERA 424 (480)
T ss_pred HHhcCcccCeEEee---cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccccc---CCcCcHHHHHHH
Confidence 37888886544444 44 479999999999998754 2233333 333567654100000 011367999999
Q ss_pred HHHHHHh
Q 007212 547 VRRALAT 553 (612)
Q Consensus 547 i~~ll~~ 553 (612)
|++++.+
T Consensus 425 v~~vm~~ 431 (480)
T PLN00164 425 VRSLMGG 431 (480)
T ss_pred HHHHhcC
Confidence 9999975
No 173
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=86.23 E-value=7.3 Score=41.14 Aligned_cols=109 Identities=15% Similarity=0.095 Sum_probs=64.2
Q ss_pred HHHHhCCCCCCCCcEEEEEccC-ccccC--HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCC----c-eEE
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRL-EEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE----K-ARG 462 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl-~~~Kg--~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~----~-v~~ 462 (612)
+.+.+++..+ +..+.+..|.- .+.|. .+...+.++.+.+.+++++++|... .++..+++....+. + +..
T Consensus 170 ~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T PRK10916 170 TCAAFSLSSE-RPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_pred HHHHcCCCCC-CCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhcccccccceeec
Confidence 4455554322 22455566653 35664 3456777776655678999998654 23333444333321 1 223
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
.+..+-.++..+++.||++|-.-. | .+-=|-|.|+|+|+-
T Consensus 247 ~g~~sL~el~ali~~a~l~I~nDT----G-p~HlAaA~g~P~val 286 (348)
T PRK10916 247 AGETQLEQAVILIAACKAIVTNDS----G-LMHVAAALNRPLVAL 286 (348)
T ss_pred cCCCCHHHHHHHHHhCCEEEecCC----h-HHHHHHHhCCCEEEE
Confidence 344466667789999999996543 2 334488999999864
No 174
>PLN02173 UDP-glucosyl transferase family protein
Probab=85.62 E-value=11 Score=41.31 Aligned_cols=137 Identities=7% Similarity=0.052 Sum_probs=73.1
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
.+++..|.... -..+.+.+.+.-|...++-.++-.+....+.+.+.+.. .++++....+.++. .++++.++..+
T Consensus 266 vvyvsfGS~~~-~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~--~~~~~~i~~W~PQ~---~iL~H~~v~~F 339 (449)
T PLN02173 266 VVYIAFGSMAK-LSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETV--DKDKSLVLKWSPQL---QVLSNKAIGCF 339 (449)
T ss_pred eEEEEeccccc-CCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhh--cCCceEEeCCCCHH---HHhCCCccceE
Confidence 67777887642 23344555555553334322222111111111111111 13445555544443 37888886665
Q ss_pred cCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 484 PSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
-+. || ++++||+++|+|+|+-..- -....+.+. +.|.-+.. .+.+ ..-+.++++++|++++.+
T Consensus 340 vtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~--~~~~--~~~~~e~v~~av~~vm~~ 408 (449)
T PLN02173 340 MTH---CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKA--EKES--GIAKREEIEFSIKEVMEG 408 (449)
T ss_pred Eec---CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEee--cccC--CcccHHHHHHHHHHHhcC
Confidence 555 44 5899999999999987643 233444442 45664310 0000 012679999999999976
No 175
>PLN02167 UDP-glycosyltransferase family protein
Probab=85.25 E-value=13 Score=41.33 Aligned_cols=140 Identities=14% Similarity=0.013 Sum_probs=69.9
Q ss_pred CcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEE-ecCChhH---HHHH-HHHHHHCCCceEEEeccChHHHHHHH
Q 007212 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPM---EKQL-EQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 403 ~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lviv-G~g~~~~---~~~l-~~l~~~~~~~v~~~~~~~~~~~~~i~ 475 (612)
.++++..|.+. ..+-+..++.+++.. +.+|+++ +...... ...+ ....++..++.....+.+.. .++
T Consensus 281 svvyvsfGS~~~~~~~~~~ela~~l~~~---~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~---~iL 354 (475)
T PLN02167 281 SVVFLCFGSLGSLPAPQIKEIAQALELV---GCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQV---EIL 354 (475)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHhC---CCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHH---HHh
Confidence 36677778863 234456666666655 5566544 3211000 0000 01111111223333333333 378
Q ss_pred HhccEEEEcCCCCCCcH-HHHHHHHcCCceEEcCCCC----ccc-ceecCcceEEecccc-cccccCCCCCHHHHHHHHH
Q 007212 476 AGADFILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVD-TVEEGFTGFQMGSFS-VDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e-~v~~g~~G~~~~~~~-~~~~~v~~~d~~~la~~i~ 548 (612)
++..+-.+-+. ||. +.+||+++|+|+|+-...+ ... .++.-+.|..+.... .+ --..-+.++++++|+
T Consensus 355 ~h~~vg~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~--~~~~~~~~~l~~av~ 429 (475)
T PLN02167 355 AHKAIGGFVSH---CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSA--YGEIVKADEIAGAVR 429 (475)
T ss_pred cCcccCeEEee---CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccc--cCCcccHHHHHHHHH
Confidence 77554332233 443 7999999999999876432 222 233334566541000 00 001136789999999
Q ss_pred HHHHh
Q 007212 549 RALAT 553 (612)
Q Consensus 549 ~ll~~ 553 (612)
+++.+
T Consensus 430 ~~m~~ 434 (475)
T PLN02167 430 SLMDG 434 (475)
T ss_pred HHhcC
Confidence 99965
No 176
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=85.17 E-value=12 Score=41.63 Aligned_cols=135 Identities=9% Similarity=-0.065 Sum_probs=68.9
Q ss_pred CcEEEEEccCcc--ccCHHHHHHHHHhcccCCeEEEEEecCCh-------hHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007212 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 403 ~~~i~~iGrl~~--~Kg~d~li~A~~~l~~~~~~lvivG~g~~-------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~ 473 (612)
..+++..|.+.. .+-+..+++++... +..|+++-..+. .+-..+.+... +..+....+.+.. .
T Consensus 284 svVyvsfGS~~~~~~~~~~ela~gL~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~~v~~w~PQ~---~ 355 (477)
T PLN02863 284 KVVYVCFGSQVVLTKEQMEALASGLEKS---GVHFIWCVKEPVNEESDYSNIPSGFEDRVA--GRGLVIRGWAPQV---A 355 (477)
T ss_pred ceEEEEeeceecCCHHHHHHHHHHHHhC---CCcEEEEECCCcccccchhhCCHHHHHHhc--cCCEEecCCCCHH---H
Confidence 356777787642 23355555555554 556665543210 01111111111 2234434444443 3
Q ss_pred HHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC----Ccccceec-CcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
++++..+.++-+. +=-++.+||+++|+|+|+-... -....+.+ -+.|..+..-. + ..-+.+++.++|.
T Consensus 356 vL~h~~v~~fvtH--~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~-~----~~~~~~~v~~~v~ 428 (477)
T PLN02863 356 ILSHRAVGAFLTH--CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGA-D----TVPDSDELARVFM 428 (477)
T ss_pred HhcCCCcCeEEec--CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCC-C----CCcCHHHHHHHHH
Confidence 6776443333233 2234799999999999987643 23333333 25676541000 0 1126788889998
Q ss_pred HHHH
Q 007212 549 RALA 552 (612)
Q Consensus 549 ~ll~ 552 (612)
+++.
T Consensus 429 ~~m~ 432 (477)
T PLN02863 429 ESVS 432 (477)
T ss_pred HHhh
Confidence 8774
No 177
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=85.09 E-value=0.92 Score=43.90 Aligned_cols=39 Identities=31% Similarity=0.438 Sum_probs=29.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..-. .+.-+..|.++|.+.||+|+|++|...+
T Consensus 1 M~ILlTNDDGi-------~a~Gi~aL~~~L~~~g~~V~VvAP~~~~ 39 (196)
T PF01975_consen 1 MRILLTNDDGI-------DAPGIRALAKALSALGHDVVVVAPDSEQ 39 (196)
T ss_dssp SEEEEE-SS-T-------TSHHHHHHHHHHTTTSSEEEEEEESSST
T ss_pred CeEEEEcCCCC-------CCHHHHHHHHHHHhcCCeEEEEeCCCCC
Confidence 99999998632 2334678999998889999999998664
No 178
>PLN02208 glycosyltransferase family protein
Probab=84.40 E-value=24 Score=38.67 Aligned_cols=84 Identities=7% Similarity=0.015 Sum_probs=52.4
Q ss_pred eEEEeccChHHHHHHHHhccEEEEcCCCCCCcH-HHHHHHHcCCceEEcCCC----Ccccceec-CcceEEecccccccc
Q 007212 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGL-IQLHAMRYGTVPIVASTG----GLVDTVEE-GFTGFQMGSFSVDCE 533 (612)
Q Consensus 460 v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~g----g~~e~v~~-g~~G~~~~~~~~~~~ 533 (612)
+....+.++. +++++..+..+-+. ||. +++||+++|+|+|+-..- .....+.+ -+.|..+.... +
T Consensus 313 ~~v~~W~PQ~---~iL~H~~v~~FvtH---cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~-~-- 383 (442)
T PLN02208 313 VVWGGWVQQP---LILDHPSIGCFVNH---CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK-T-- 383 (442)
T ss_pred cEeeccCCHH---HHhcCCccCeEEcc---CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc-C--
Confidence 4433444444 37888887665565 555 799999999999987642 23333333 34566541000 0
Q ss_pred cCCCCCHHHHHHHHHHHHHhh
Q 007212 534 AVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 534 ~v~~~d~~~la~~i~~ll~~~ 554 (612)
..-+.+++.++|++++++.
T Consensus 384 --~~~~~~~l~~ai~~~m~~~ 402 (442)
T PLN02208 384 --GWFSKESLSNAIKSVMDKD 402 (442)
T ss_pred --CcCcHHHHHHHHHHHhcCC
Confidence 0137789999999999763
No 179
>PLN02207 UDP-glycosyltransferase
Probab=84.30 E-value=21 Score=39.54 Aligned_cols=139 Identities=11% Similarity=0.026 Sum_probs=72.7
Q ss_pred CcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCChh-HHHHH-HHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKP-MEKQL-EQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~-~~~~l-~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
..+++..|.+. ..+-+..++.++..+ +..|+++=..+.. ..+.+ +...++.+++.....+.++.+ ++++.
T Consensus 276 sVVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~---IL~H~ 349 (468)
T PLN02207 276 SVVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVE---ILAHK 349 (468)
T ss_pred cEEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHH---Hhccc
Confidence 36777788764 234455666666655 4455554322100 00000 111122333444444444443 67777
Q ss_pred cEEEEcCCCCCCcH-HHHHHHHcCCceEEcCCCC----cccceec-CcceEEecc-cccccccCCCCCHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGL-IQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 479 Dv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~-~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
.+..+-+. ||. +.+||+.+|+|+|+-...+ ....+.+ -+.|.-++. ...+. -..-+.+++.++|++++
T Consensus 350 ~vg~FvTH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~--~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 350 AVGGFVSH---CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHS--DEIVNANEIETAIRCVM 424 (468)
T ss_pred ccceeeec---CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEeccccccc--CCcccHHHHHHHHHHHH
Confidence 76544444 444 7899999999999876432 3333222 345653310 00000 01236789999999999
Q ss_pred H
Q 007212 552 A 552 (612)
Q Consensus 552 ~ 552 (612)
.
T Consensus 425 ~ 425 (468)
T PLN02207 425 N 425 (468)
T ss_pred h
Confidence 6
No 180
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=83.97 E-value=18 Score=39.85 Aligned_cols=137 Identities=12% Similarity=0.083 Sum_probs=75.9
Q ss_pred CcEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEE-EecCC-------hhHH---HHHHHHHHHCCCceEEEeccChH
Q 007212 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIV-LGTGK-------KPME---KQLEQLEILYPEKARGVAKFNIP 469 (612)
Q Consensus 403 ~~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvi-vG~g~-------~~~~---~~l~~l~~~~~~~v~~~~~~~~~ 469 (612)
..+++..|.+. +.+-++.+..++..+. .+|++ +.... .... ...+...++.+++.....+.++.
T Consensus 262 sVvyvsfGS~~~l~~~q~~ela~gL~~s~---~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~ 338 (455)
T PLN02152 262 SVIYVSFGTMVELSKKQIEELARALIEGK---RPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQI 338 (455)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHcC---CCeEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHH
Confidence 46777788865 4556677777777762 25554 33210 0000 00122222334444444444433
Q ss_pred HHHHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecC-cceEEecccccccccCCCCCHHHH
Q 007212 470 LAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 470 ~~~~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~l 543 (612)
.++++.++..+-+. || ++++||+.+|+|+|+-... .....+.+. +.|+-+.. + .-+.-+.+++
T Consensus 339 ---~iL~h~~vg~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~---~--~~~~~~~e~l 407 (455)
T PLN02152 339 ---EVLRHRAVGCFVTH---CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRE---N--SEGLVERGEI 407 (455)
T ss_pred ---HHhCCcccceEEee---CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeec---C--cCCcCcHHHH
Confidence 37888887655555 33 4799999999999987642 233333331 23443210 0 0012367999
Q ss_pred HHHHHHHHHh
Q 007212 544 STTVRRALAT 553 (612)
Q Consensus 544 a~~i~~ll~~ 553 (612)
+++|++++++
T Consensus 408 ~~av~~vm~~ 417 (455)
T PLN02152 408 RRCLEAVMEE 417 (455)
T ss_pred HHHHHHHHhh
Confidence 9999999975
No 181
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=82.80 E-value=24 Score=37.52 Aligned_cols=165 Identities=15% Similarity=0.159 Sum_probs=107.5
Q ss_pred EEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-----hhHHHHHHHHHHH-CCCceEEEeccC-----hHHHHH
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----KPMEKQLEQLEIL-YPEKARGVAKFN-----IPLAHM 473 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-----~~~~~~l~~l~~~-~~~~v~~~~~~~-----~~~~~~ 473 (612)
.|=|.|..++.+-..+..+.+.+++++++.++|+-+.. .++.+++.+.... .|+.+.++..-. .+.+..
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~a 235 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARA 235 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHH
Confidence 45567788889999999999999999999999998742 3455556666554 367777766542 233334
Q ss_pred HHHhccE--EEEcCCC----CCCcHHHHHHHHcCCceEEcCCCCcccceecCc----ceEEecccccccccCCCCCHHHH
Q 007212 474 IIAGADF--ILIPSRF----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF----TGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 474 i~~~aDv--~v~pS~~----E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~----~G~~~~~~~~~~~~v~~~d~~~l 543 (612)
+-...|+ +|++-.. -|..++..+ +.++|||--.+|..-|-++.-. .+-+ .--+|++.|
T Consensus 236 Fk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~pk~Fvsrl----------LGmGDi~gl 303 (483)
T KOG0780|consen 236 FKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDPKPFVSRL----------LGMGDIEGL 303 (483)
T ss_pred HHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCChHHHHHHH----------hccccHHHH
Confidence 5556666 3333321 234455554 5689998888876655444311 1111 144899999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 544 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 544 a~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
.+.+.++..+. ..++.++-..-+|+...+.+++..++.
T Consensus 304 vek~~ev~~~d----~~el~~kl~~gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 304 VEKVQEVGKDD----AKELVEKLKQGKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHHHHHhhhh----HHHHHHHHHhCCccHHHHHHHHHHHHh
Confidence 99999988442 223333444568999988888887765
No 182
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=82.29 E-value=74 Score=33.94 Aligned_cols=115 Identities=12% Similarity=0.046 Sum_probs=68.4
Q ss_pred HHHHHHHHHhCCCC-CCCCcEEEEEccCccccC-HHHHHHHHHhcccCCeEEEEEecCC-hhHHHHHHH--HH--H--HC
Q 007212 386 LLKEALQAEVGLPV-DRNIPVIGFIGRLEEQKG-SDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQ--LE--I--LY 456 (612)
Q Consensus 386 ~~~~~l~~~~gl~~-~~~~~~i~~iGrl~~~Kg-~d~li~A~~~l~~~~~~lvivG~g~-~~~~~~l~~--l~--~--~~ 456 (612)
..+.++.+++|++. .++..+|..++ ..+. +..++++++.. ...+.+.|.++-. ..+...+.. +. . +.
T Consensus 166 ~~~~~~~~~lg~~~~~~~~~~vslF~---Ye~~~l~~ll~~~~~~-~~pv~llvp~g~~~~~~~~~~~~~~~~~g~~~~~ 241 (374)
T PF10093_consen 166 AARAAFLRRLGLPEPEPGALRVSLFC---YENAALASLLDAWAAS-PKPVHLLVPEGRALNSLAAWLGDALLQAGDSWQR 241 (374)
T ss_pred HHHHHHHHHcCCCCCCCCCeEEEEEe---CCchHHHHHHHHHhcC-CCCeEEEecCCccHHHHHHHhccccccCcccccc
Confidence 34677888999963 23334443333 2333 78888888865 3567777766432 222222210 00 0 11
Q ss_pred C-CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 457 P-EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 457 ~-~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+ ..+..++-.+.+....++..||+-++=-. =+++-|..+|+|.|=.-.
T Consensus 242 g~l~l~~lPF~~Q~~yD~LLw~cD~NfVRGE-----DSfVRAqwAgkPFvWhIY 290 (374)
T PF10093_consen 242 GNLTLHVLPFVPQDDYDRLLWACDFNFVRGE-----DSFVRAQWAGKPFVWHIY 290 (374)
T ss_pred CCeEEEECCCCCHHHHHHHHHhCccceEecc-----hHHHHHHHhCCCceEecC
Confidence 1 23444445578888899999999885332 257889999999885543
No 183
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=82.05 E-value=1.6 Score=38.50 Aligned_cols=40 Identities=25% Similarity=0.279 Sum_probs=25.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+|+-. |.....=-.+-+..|+.+.+++||+|.++.+.
T Consensus 1 Mki~fvmD---pi~~i~~~kDTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 1 MKIAFVMD---PIESIKPYKDTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GG
T ss_pred CeEEEEeC---CHHHCCCCCChHHHHHHHHHHCCCEEEEEEcC
Confidence 89999986 32111111345678999999999999999987
No 184
>PLN02554 UDP-glycosyltransferase family protein
Probab=81.39 E-value=26 Score=38.94 Aligned_cols=140 Identities=12% Similarity=0.077 Sum_probs=71.2
Q ss_pred cEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEEecCCh------------hHHHH-HHHHHHHCCCceEEEeccCh
Q 007212 404 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKK------------PMEKQ-LEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 404 ~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lvivG~g~~------------~~~~~-l~~l~~~~~~~v~~~~~~~~ 468 (612)
.+++..|.+. ..+-+..++.+++.+ +.+|+++-.++. ...+. -....++.+++.....+.+.
T Consensus 276 vvyvsfGS~~~~~~~~~~~la~~l~~~---~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ 352 (481)
T PLN02554 276 VVFLCFGSMGGFSEEQAREIAIALERS---GHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQ 352 (481)
T ss_pred EEEEeccccccCCHHHHHHHHHHHHHc---CCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCH
Confidence 5677788863 344666666666665 446555432210 00000 01111112233444444444
Q ss_pred HHHHHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCC----Ccc-cceecCcceEEeccc-cccc--ccCCCCC
Q 007212 469 PLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLV-DTVEEGFTGFQMGSF-SVDC--EAVDPVD 539 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~-e~v~~g~~G~~~~~~-~~~~--~~v~~~d 539 (612)
. .++++..+..+-+. || ++++||+.+|+|+|+.... ... ..++.-+.|..+..- ..+- .--..-+
T Consensus 353 ~---~iL~H~~v~~FvtH---~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~ 426 (481)
T PLN02554 353 V---AVLAKPAIGGFVTH---CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVT 426 (481)
T ss_pred H---HHhCCcccCccccc---CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEc
Confidence 3 36755544333343 44 4799999999999987643 222 234443456654200 0000 0001236
Q ss_pred HHHHHHHHHHHHH
Q 007212 540 VAAVSTTVRRALA 552 (612)
Q Consensus 540 ~~~la~~i~~ll~ 552 (612)
.+++.++|++++.
T Consensus 427 ~e~l~~av~~vm~ 439 (481)
T PLN02554 427 AEEIERGIRCLME 439 (481)
T ss_pred HHHHHHHHHHHhc
Confidence 7899999999996
No 185
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=81.36 E-value=27 Score=38.78 Aligned_cols=82 Identities=12% Similarity=0.015 Sum_probs=51.1
Q ss_pred eEEEeccChHHHHHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccce-ecCcceEEecccccccc
Q 007212 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCE 533 (612)
Q Consensus 460 v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~~~~~~~~~~~ 533 (612)
+....+.++.. ++++..+..+-+. || ++.+||+.+|+|+|+....+ ....+ +.-+.|..+...+
T Consensus 340 ~vv~~W~PQ~~---iL~h~~vg~FitH---~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~---- 409 (481)
T PLN02992 340 FVVPSWAPQAE---ILAHQAVGGFLTH---CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK---- 409 (481)
T ss_pred EEEeecCCHHH---HhCCcccCeeEec---CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC----
Confidence 44444544443 7888887444343 44 47999999999999886432 33344 2334566541000
Q ss_pred cCCCCCHHHHHHHHHHHHHh
Q 007212 534 AVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 534 ~v~~~d~~~la~~i~~ll~~ 553 (612)
..-+.++++++|.+++.+
T Consensus 410 --~~~~~~~l~~av~~vm~~ 427 (481)
T PLN02992 410 --EVISRSKIEALVRKVMVE 427 (481)
T ss_pred --CcccHHHHHHHHHHHhcC
Confidence 124778999999999975
No 186
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=80.80 E-value=6.1 Score=40.06 Aligned_cols=100 Identities=15% Similarity=0.139 Sum_probs=58.0
Q ss_pred CCCcEEEEEccCccc-------cCHHHHHHHHHhccc--CCeEEEEEecCCh---hHHHHHHHHHHHCCCceEEEeccCh
Q 007212 401 RNIPVIGFIGRLEEQ-------KGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 401 ~~~~~i~~iGrl~~~-------Kg~d~li~A~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~~~~~v~~~~~~~~ 468 (612)
.+++.|++....... .....+++.+..+.+ ++.+++|==.... .....+.++.. .++ +.... +.
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~-~~~-~~~~~--~~ 190 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN-LPN-VVIID--DD 190 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc-CCC-eEEEC--CC
Confidence 355788888887654 234445555555543 5788876443210 01122222222 222 22221 22
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
-....++..||.++.-+ +.+.+||+.+|+||++-..
T Consensus 191 ~~~~~Ll~~s~~Vvtin-----StvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 191 VNLYELLEQSDAVVTIN-----STVGLEALLHGKPVIVFGR 226 (269)
T ss_pred CCHHHHHHhCCEEEEEC-----CHHHHHHHHcCCceEEecC
Confidence 23446899999988543 5789999999999999754
No 187
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=80.64 E-value=13 Score=38.80 Aligned_cols=98 Identities=11% Similarity=0.093 Sum_probs=61.2
Q ss_pred cEEEEEccCccccC--HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg--~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.+++..|.-.+.|. .+...+.+..+.+.+.++++.|.++. .++..+++....+ .+...+..+-.++..+++.||++
T Consensus 180 ~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e~~~~~~i~~~~~-~~~l~g~~sL~elaali~~a~l~ 257 (322)
T PRK10964 180 YLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH-EEQRAKRLAEGFP-YVEVLPKLSLEQVARVLAGAKAV 257 (322)
T ss_pred eEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHccCC-cceecCCCCHHHHHHHHHhCCEE
Confidence 33344554345564 34677777777656788888633331 2334455544333 34445666777777899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
|-... ..+-=|-|+|+|+|+-=
T Consensus 258 I~nDS-----Gp~HlA~A~g~p~valf 279 (322)
T PRK10964 258 VSVDT-----GLSHLTAALDRPNITLY 279 (322)
T ss_pred EecCC-----cHHHHHHHhCCCEEEEE
Confidence 96543 33444889999998754
No 188
>PLN02764 glycosyltransferase family protein
Probab=80.44 E-value=42 Score=36.95 Aligned_cols=73 Identities=4% Similarity=-0.061 Sum_probs=45.3
Q ss_pred HHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceec-CcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
++++..+..+-+. +=-++.+||+.+|+|+|+-...+ ....+.+ -+.|+.+... +. ..-+.+++.++|+
T Consensus 330 vL~h~~v~~FvtH--~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~--~~---~~~~~e~i~~av~ 402 (453)
T PLN02764 330 ILSHPSVGCFVSH--CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVARE--ET---GWFSKESLRDAIN 402 (453)
T ss_pred HhcCcccCeEEec--CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccc--cC---CccCHHHHHHHHH
Confidence 6777655333343 22357999999999999876533 3334432 3456543100 00 0237899999999
Q ss_pred HHHHh
Q 007212 549 RALAT 553 (612)
Q Consensus 549 ~ll~~ 553 (612)
+++++
T Consensus 403 ~vm~~ 407 (453)
T PLN02764 403 SVMKR 407 (453)
T ss_pred HHhcC
Confidence 99976
No 189
>PLN02555 limonoid glucosyltransferase
Probab=80.15 E-value=19 Score=39.96 Aligned_cols=137 Identities=13% Similarity=0.043 Sum_probs=69.6
Q ss_pred cEEEEEccCc--cccCHHHHHHHHHhcccCCeEEEEE-ecC--ChhHH-HHH-HHHHHHCCCceEEEeccChHHHHHHHH
Q 007212 404 PVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVL-GTG--KKPME-KQL-EQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 404 ~~i~~iGrl~--~~Kg~d~li~A~~~l~~~~~~lviv-G~g--~~~~~-~~l-~~l~~~~~~~v~~~~~~~~~~~~~i~~ 476 (612)
.+++..|.+. ..+-+..++.++. ..+.+|+++ ... ..... ..+ +....+.+++.....+.+... +++
T Consensus 279 VvyvsfGS~~~~~~~q~~ela~~l~---~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~---iL~ 352 (480)
T PLN02555 279 VVYISFGTVVYLKQEQIDEIAYGVL---NSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEK---VLA 352 (480)
T ss_pred eeEEEeccccCCCHHHHHHHHHHHH---hcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHH---HhC
Confidence 5677778764 2333444444444 345576665 311 00000 000 112222334454444444433 674
Q ss_pred h--ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecC-cceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 477 G--ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 477 ~--aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
+ +..|| +. +=-++.+||+.+|+|+|+...- .....+.+. +.|+.++....+- ..-+.+++.++|++
T Consensus 353 H~~v~~Fv--tH--~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~---~~v~~~~v~~~v~~ 425 (480)
T PLN02555 353 HPSVACFV--TH--CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAEN---KLITREEVAECLLE 425 (480)
T ss_pred CCccCeEE--ec--CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCcccc---CcCcHHHHHHHHHH
Confidence 4 44455 33 1234799999999999987643 233334443 5676542100000 11257899999999
Q ss_pred HHHh
Q 007212 550 ALAT 553 (612)
Q Consensus 550 ll~~ 553 (612)
++.+
T Consensus 426 vm~~ 429 (480)
T PLN02555 426 ATVG 429 (480)
T ss_pred HhcC
Confidence 9965
No 190
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=76.00 E-value=31 Score=33.50 Aligned_cols=119 Identities=19% Similarity=0.291 Sum_probs=65.3
Q ss_pred CcEEEEEccC-ccccCHHHHHHHHHhcccCC--eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 403 IPVIGFIGRL-EEQKGSDILAAAIPHFIKEN--VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 403 ~~~i~~iGrl-~~~Kg~d~li~A~~~l~~~~--~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
..+++|+|.- .+.+. .|++.++++++.+ +.++..|..... .+.+.+.....+.+ -..+.
T Consensus 108 ~riVvFvGSpi~e~ek--eLv~~akrlkk~~Vaidii~FGE~~~~-~e~l~~fida~N~~---------------~~gsh 169 (259)
T KOG2884|consen 108 QRIVVFVGSPIEESEK--ELVKLAKRLKKNKVAIDIINFGEAENN-TEKLFEFIDALNGK---------------GDGSH 169 (259)
T ss_pred eEEEEEecCcchhhHH--HHHHHHHHHHhcCeeEEEEEecccccc-HHHHHHHHHHhcCC---------------CCCce
Confidence 3588999984 33333 6777778887755 455555654322 23333333322210 13456
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
++.+|+- + +|+-...-.|++.-+.|+..--.....+-|-| - |+|.+-.+||.+|+--++.
T Consensus 170 lv~Vppg----~--~L~d~l~ssPii~ge~g~a~~~~~a~g~~f~f---g-----vdp~~DPELAlALRlSMEE 229 (259)
T KOG2884|consen 170 LVSVPPG----P--LLSDALLSSPIIQGEDGGAAAGLGANGMDFEF---G-----VDPEDDPELALALRLSMEE 229 (259)
T ss_pred EEEeCCC----c--cHHHHhhcCceeccCccccccccccccccccc---C-----CCcccCHHHHHHHHhhHHH
Confidence 6666653 1 44445556778877654433222222223333 2 4777778999999866664
No 191
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=75.91 E-value=3.7 Score=36.65 Aligned_cols=28 Identities=32% Similarity=0.302 Sum_probs=21.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|--.=...|+++|.++||+|.+.++.
T Consensus 8 t~Ghv~P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT-EEEEEETG
T ss_pred ChhHHHHHHHHHHHHhccCCeEEEeecc
Confidence 4555556678999999999999988865
No 192
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=74.95 E-value=4.4 Score=35.98 Aligned_cols=45 Identities=13% Similarity=0.040 Sum_probs=30.3
Q ss_pred HHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCccc
Q 007212 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 470 ~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
.+..++..+|++|--|.-+..--.+-.++.+|+|+|+-.+|.-.+
T Consensus 60 ~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~~ 104 (124)
T PF01113_consen 60 DLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSDE 104 (124)
T ss_dssp -HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHHH
T ss_pred hHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCHH
Confidence 355788889999988865555555777888999999988876543
No 193
>PLN00414 glycosyltransferase family protein
Probab=74.40 E-value=86 Score=34.49 Aligned_cols=72 Identities=8% Similarity=0.022 Sum_probs=46.3
Q ss_pred HHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCC----Cccccee-cCcceEEecccccccccCCCCCHHHHHHHH
Q 007212 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~-~g~~G~~~~~~~~~~~~v~~~d~~~la~~i 547 (612)
+++++.+..+-+. || ++.+||+.+|+|+|+-... .....+. +-+.|..+... .+ ..-+.+++++++
T Consensus 325 vL~h~~v~~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~-~~----~~~~~~~i~~~v 396 (446)
T PLN00414 325 ILSHPSVGCFVNH---CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRE-DS----GWFSKESLRDTV 396 (446)
T ss_pred HhcCCccceEEec---CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccc-cC----CccCHHHHHHHH
Confidence 7887755333343 44 5799999999999987643 2334443 34567654110 00 024789999999
Q ss_pred HHHHHh
Q 007212 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
++++.+
T Consensus 397 ~~~m~~ 402 (446)
T PLN00414 397 KSVMDK 402 (446)
T ss_pred HHHhcC
Confidence 999976
No 194
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=72.60 E-value=31 Score=32.49 Aligned_cols=71 Identities=17% Similarity=0.244 Sum_probs=43.3
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+ |.+|.-.++...+++.+..+.-++ .+.|+||.-- + .|+. .+.+ .
T Consensus 92 rPdv-ii~nGpg~~vp~~~~~~l~~~~~~-~~~kiIyIES-~---aRv~-----~lSl------------------T--- 139 (170)
T PF08660_consen 92 RPDV-IISNGPGTCVPVCLAAKLLRLLGL-RGSKIIYIES-F---ARVK-----TLSL------------------T--- 139 (170)
T ss_pred CCCE-EEEcCCceeeHHHHHHHHHHHhhc-cCCcEEEEEe-e---eecC-----CCch------------------H---
Confidence 5996 889887777777776666433332 2778876532 0 0000 0000 0
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHH
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELV 333 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~ 333 (612)
=|....-+|.+++.-+.+++...
T Consensus 140 ---Gklly~~aD~f~VQW~~l~~~yp 162 (170)
T PF08660_consen 140 ---GKLLYPFADRFIVQWEELAEKYP 162 (170)
T ss_pred ---HHHHHHhCCEEEEcCHHHHhHCC
Confidence 13345579999999999988754
No 195
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=71.63 E-value=6.7 Score=35.15 Aligned_cols=40 Identities=15% Similarity=0.131 Sum_probs=30.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeE-EEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V-~vit~~ 127 (612)
|||+++... +|+ .+-...-...+++++.+.||+| .|+-..
T Consensus 1 m~~~iv~~~-~Py--~~~~~~~al~~A~aa~~~gh~v~~vFf~~ 41 (128)
T PRK00207 1 MRYAIAVTG-PAY--GTQQASSAYQFAQALLAEGHELVSVFFYQ 41 (128)
T ss_pred CEEEEEEcC-CCC--CCHHHHHHHHHHHHHHhCCCCeeEEEEeh
Confidence 899999876 676 4445566778999999999994 666644
No 196
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=71.20 E-value=5.3 Score=41.58 Aligned_cols=36 Identities=25% Similarity=0.247 Sum_probs=28.2
Q ss_pred cCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|+.|||++|+ .|++|. .++..|++.||+|++++..
T Consensus 2 ~~~~m~I~IiG--------~GaiG~---~lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 2 DSETPRIGIIG--------TGAIGG---FYGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CCcCcEEEEEC--------CCHHHH---HHHHHHHHCCCeEEEEEeC
Confidence 35679999997 477774 4566689999999999865
No 197
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=69.55 E-value=30 Score=33.10 Aligned_cols=39 Identities=15% Similarity=0.091 Sum_probs=28.0
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeC
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~n 356 (612)
.+.+..++..|.|.+.|+..++.+.+ .|.+.+ ++.+.-|
T Consensus 141 ~~~r~~l~~f~~i~aqs~~da~r~~~---lG~~~~------~v~v~Gn 179 (186)
T PF04413_consen 141 FLFRPLLSRFDRILAQSEADAERFRK---LGAPPE------RVHVTGN 179 (186)
T ss_dssp HHHHHHGGG-SEEEESSHHHHHHHHT---TT-S--------SEEE---
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcc------eEEEeCc
Confidence 45688899999999999999999997 888766 7777665
No 198
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=68.11 E-value=39 Score=37.31 Aligned_cols=93 Identities=17% Similarity=0.135 Sum_probs=57.4
Q ss_pred HHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCc-eEEcCC--CCcccceecCcceEEecccccccccCCCCCHHHHHHH
Q 007212 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV-PIVAST--GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 470 ~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~P-vI~s~~--gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~ 546 (612)
...+.++.+-+.+.|.-.++..-.++||+.+||. ||.++. ....++++-..-.+. |+..++..+
T Consensus 336 ~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~----------v~~~~v~~~--- 402 (464)
T KOG1021|consen 336 NYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVF----------VPEKDVPEL--- 402 (464)
T ss_pred hHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEE----------EEHHHhhhH---
Confidence 3447899999999999999888899999999985 566664 333344433322332 233344444
Q ss_pred HHHHHHhhCHHHHHHHHHHH---HHhhcCcHH
Q 007212 547 VRRALATYGTQALAEMMKNG---MAQDLSWKG 575 (612)
Q Consensus 547 i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~ 575 (612)
|.+.|......+...|.++. +...|-|..
T Consensus 403 ~~~iL~~i~~~~~~~m~~~v~~~v~r~~~~~~ 434 (464)
T KOG1021|consen 403 IKNILLSIPEEEVLRMRENVIRLVPRHFLKKP 434 (464)
T ss_pred HHHHHHhcCHHHHHHHHHHHHHHHHhhEEeCC
Confidence 56666554445555555554 334444443
No 199
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=67.82 E-value=7.3 Score=37.08 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=27.0
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||.+|+.. |-+| ..+.++..++||+|+.|..+
T Consensus 1 mKIaiIgAs-------G~~G---s~i~~EA~~RGHeVTAivRn 33 (211)
T COG2910 1 MKIAIIGAS-------GKAG---SRILKEALKRGHEVTAIVRN 33 (211)
T ss_pred CeEEEEecC-------chhH---HHHHHHHHhCCCeeEEEEeC
Confidence 899999974 3333 56888899999999999876
No 200
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=64.52 E-value=31 Score=28.67 Aligned_cols=36 Identities=14% Similarity=0.144 Sum_probs=22.7
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecC
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNI 269 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~ 269 (612)
+.| |+|.|.-.+.+..-.+.... ..+.|.|||-|++
T Consensus 50 ~I~-IVHgH~a~S~l~hE~i~hA~-----~mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RID-IVHGHQAFSTLCHEAILHAR-----TMGLKTVFTDHSL 85 (90)
T ss_pred Cee-EEEeehhhhHHHHHHHHHHH-----hCCCcEEeecccc
Confidence 468 59999755554433332211 1489999999964
No 201
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=63.94 E-value=23 Score=36.25 Aligned_cols=68 Identities=16% Similarity=0.251 Sum_probs=46.1
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CC--CCcccceecCcceEEecccccccccCCCCCHHHHHHHH
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-ST--GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~--gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i 547 (612)
..+.++.+.+.++|.-..+...-++|||++||.+|.- +. -.+.|+++=....+. ++..+..+|.+.|
T Consensus 230 ~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~----------v~~~~~~~l~~iL 299 (302)
T PF03016_consen 230 YMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVR----------VPEADLPELPEIL 299 (302)
T ss_pred HHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEE----------ECHHHHHHHHHHH
Confidence 4468999999999888777889999999999976654 42 223455532233333 3666666666555
Q ss_pred H
Q 007212 548 R 548 (612)
Q Consensus 548 ~ 548 (612)
+
T Consensus 300 ~ 300 (302)
T PF03016_consen 300 R 300 (302)
T ss_pred h
Confidence 4
No 202
>PLN00016 RNA-binding protein; Provisional
Probab=63.34 E-value=7.5 Score=41.55 Aligned_cols=38 Identities=26% Similarity=0.287 Sum_probs=29.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|||++++.. .||.|..-..|++.|.++||+|++++..
T Consensus 52 ~~~VLVt~~~------~GatG~iG~~lv~~L~~~G~~V~~l~R~ 89 (378)
T PLN00016 52 KKKVLIVNTN------SGGHAFIGFYLAKELVKAGHEVTLFTRG 89 (378)
T ss_pred cceEEEEecc------CCCceeEhHHHHHHHHHCCCEEEEEecC
Confidence 4789888655 4555655577999999999999999865
No 203
>PF12996 DUF3880: DUF based on E. rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=60.72 E-value=21 Score=28.93 Aligned_cols=44 Identities=14% Similarity=0.238 Sum_probs=38.6
Q ss_pred HHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCc
Q 007212 313 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLT 367 (612)
Q Consensus 313 ~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~ 367 (612)
......|.|++.-+...+.+++ .|++ ++..+|-++|+..+.|..
T Consensus 14 ~i~~~~~~iFt~D~~~~~~~~~---~G~~--------~V~yLPLAa~~~~~~p~~ 57 (79)
T PF12996_consen 14 SIANSYDYIFTFDRSFVEEYRN---LGAE--------NVFYLPLAANPERFRPIP 57 (79)
T ss_pred hhCCCCCEEEEECHHHHHHHHH---cCCC--------CEEEccccCCHHHhCccc
Confidence 4466899999999999999997 6766 899999999999998874
No 204
>PLN02572 UDP-sulfoquinovose synthase
Probab=60.11 E-value=13 Score=40.80 Aligned_cols=34 Identities=18% Similarity=0.254 Sum_probs=24.8
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
.++|||++.+. +|++| ..|++.|+++||+|.++.
T Consensus 45 ~~~k~VLVTGa-------tGfIG---s~Lv~~L~~~G~~V~~~d 78 (442)
T PLN02572 45 SKKKKVMVIGG-------DGYCG---WATALHLSKRGYEVAIVD 78 (442)
T ss_pred ccCCEEEEECC-------CcHHH---HHHHHHHHHCCCeEEEEe
Confidence 44577766553 35555 578899999999998874
No 205
>PRK05866 short chain dehydrogenase; Provisional
Probab=58.78 E-value=17 Score=37.36 Aligned_cols=42 Identities=29% Similarity=0.422 Sum_probs=29.1
Q ss_pred ccccccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 76 SLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 76 ~~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.....++++++|++++. .||+| ..+++.|+++|++|.++..+
T Consensus 32 ~~~~~~~~~k~vlItGa-------sggIG---~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 32 PRQPVDLTGKRILLTGA-------SSGIG---EAAAEQFARRGATVVAVARR 73 (293)
T ss_pred CCCCcCCCCCEEEEeCC-------CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 33345555666666553 47777 56888899999999887654
No 206
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=58.00 E-value=17 Score=33.10 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=31.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++|+...- +.|-...++..+.+.+.+.|++|.++-..
T Consensus 1 Mkilii~gS~r---~~~~t~~l~~~~~~~l~~~g~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGSPR---KNSNTRKLAEAVAEQLEEAGAEVEVIDLA 40 (152)
T ss_dssp -EEEEEESSSS---TTSHHHHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEEECcCC---CCCHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 99999987632 35667777788888888889999999866
No 207
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=56.82 E-value=1.8e+02 Score=32.08 Aligned_cols=129 Identities=12% Similarity=-0.008 Sum_probs=69.3
Q ss_pred cEEEEEccCc-----cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHC----CCceEEEeccChHHHHHH
Q 007212 404 PVIGFIGRLE-----EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY----PEKARGVAKFNIPLAHMI 474 (612)
Q Consensus 404 ~~i~~iGrl~-----~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~----~~~v~~~~~~~~~~~~~i 474 (612)
.+++..|... +.+-...++.+++.+ +++.|++.=..+.... +.... ++++....+.++.++-
T Consensus 279 vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~--~~~~FiW~~~~~~~~~-----~~~~~~~~~~~nV~~~~W~PQ~~ll-- 349 (496)
T KOG1192|consen 279 VVYISFGSMVNSADLPEEQKKELAKALESL--QGVTFLWKYRPDDSIY-----FPEGLPNRGRGNVVLSKWAPQNDLL-- 349 (496)
T ss_pred eEEEECCcccccccCCHHHHHHHHHHHHhC--CCceEEEEecCCcchh-----hhhcCCCCCcCceEEecCCCcHHHh--
Confidence 5666677764 455666777788777 5777666554432111 22222 2346655566555431
Q ss_pred HHhccEEEEcCCCCCCcH-HHHHHHHcCCceEEcCC----CCccc-ceecCcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 475 IAGADFILIPSRFEPCGL-IQLHAMRYGTVPIVAST----GGLVD-TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 475 ~~~aDv~v~pS~~E~~gl-~~lEAma~G~PvI~s~~----gg~~e-~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
+...-+..+-+. ||+ +.+|+..+|+|+|+... .-... +.+++..+.+. ..+..+.+ +.+++.
T Consensus 350 l~H~~v~~FvTH---gG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~--------~~~~~~~~-~~~~~~ 417 (496)
T KOG1192|consen 350 LDHPAVGGFVTH---GGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLD--------KRDLVSEE-LLEAIK 417 (496)
T ss_pred cCCCcCcEEEEC---CcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEe--------hhhcCcHH-HHHHHH
Confidence 232222222232 444 46999999999995432 22333 33444444442 12233334 778888
Q ss_pred HHHHh
Q 007212 549 RALAT 553 (612)
Q Consensus 549 ~ll~~ 553 (612)
.++++
T Consensus 418 ~il~~ 422 (496)
T KOG1192|consen 418 EILEN 422 (496)
T ss_pred HHHcC
Confidence 88775
No 208
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=56.45 E-value=20 Score=34.65 Aligned_cols=38 Identities=24% Similarity=0.031 Sum_probs=29.8
Q ss_pred CCCceEEEEEecccCccccccHHHHh--hchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~--~~L~~~L~~~Gh~V~vit~~ 127 (612)
++++||++-- +||.+.+- .+|.+.|.+.||+|.|+.+.
T Consensus 3 l~~k~IllgV--------TGsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 3 LKGKRIGFGL--------TGSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CCCCEEEEEE--------cCHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 3567877654 57777664 79999999999999999865
No 209
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=55.92 E-value=12 Score=37.84 Aligned_cols=40 Identities=23% Similarity=0.292 Sum_probs=29.8
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
++||||+.+..-.. .-| +..|.++|.+.| +|+|++|.-++
T Consensus 4 ~~M~ILltNDDGi~---a~G----i~aL~~~l~~~g-~V~VvAP~~~~ 43 (257)
T PRK13932 4 KKPHILVCNDDGIE---GEG----IHVLAASMKKIG-RVTVVAPAEPH 43 (257)
T ss_pred CCCEEEEECCCCCC---CHH----HHHHHHHHHhCC-CEEEEcCCCCC
Confidence 56999999887322 223 568889998888 79999998543
No 210
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=54.30 E-value=82 Score=29.59 Aligned_cols=99 Identities=22% Similarity=0.322 Sum_probs=63.3
Q ss_pred ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEec----cChHHHHHHH-----HhccEEEEcC
Q 007212 415 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK----FNIPLAHMII-----AGADFILIPS 485 (612)
Q Consensus 415 ~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~----~~~~~~~~i~-----~~aDv~v~pS 485 (612)
--|.|.+.+.+....+++.++.++|+.+...++..+.+...+|+ +...+. |+.++...+. ..+|++++-.
T Consensus 31 v~g~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~-l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vgl 109 (172)
T PF03808_consen 31 VTGSDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPG-LRIVGYHHGYFDEEEEEAIINRINASGPDIVFVGL 109 (172)
T ss_pred cCHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCC-eEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEEC
Confidence 56889999999988778889999999887788888888888884 444433 3333333332 5778888754
Q ss_pred CC---CCCcHHHHHHHHcCCceEEcCCCCccccee
Q 007212 486 RF---EPCGLIQLHAMRYGTVPIVASTGGLVDTVE 517 (612)
Q Consensus 486 ~~---E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 517 (612)
-. |-| +.+-....-+.|.-..|+.-++..
T Consensus 110 G~PkQE~~---~~~~~~~l~~~v~i~vG~~~d~~a 141 (172)
T PF03808_consen 110 GAPKQERW---IARHRQRLPAGVIIGVGGAFDFLA 141 (172)
T ss_pred CCCHHHHH---HHHHHHHCCCCEEEEECchhhhhc
Confidence 32 222 222222222225666677766653
No 211
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=53.38 E-value=1.1e+02 Score=34.31 Aligned_cols=159 Identities=14% Similarity=0.088 Sum_probs=95.9
Q ss_pred cEEEEEccCc-cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 404 PVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~i~~iGrl~-~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
...+-.|.-. -.||-+..++++.+. -.++-.|.+... .. ...|..|.-++..+.++...++..+-++|
T Consensus 278 ~~AlVyGK~~~~w~~k~~~l~~l~~~--~eih~tV~~~~~--~~-------~~~P~~V~NHG~l~~~ef~~lL~~akvfi 346 (559)
T PF15024_consen 278 NQALVYGKERYMWKGKEKYLDVLHKY--MEIHGTVYDEPQ--RP-------PNVPSFVKNHGILSGDEFQQLLRKAKVFI 346 (559)
T ss_pred ceeEEEccchhhhcCcHHHHHHHHhh--cEEEEEeccCCC--CC-------cccchhhhhcCcCCHHHHHHHHHhhhEee
Confidence 3444455543 467888888888775 355555544322 00 11222344456678888889999999999
Q ss_pred EcCC-CCCCcHHHHHHHHcCCceEEcCCCCc-----ccceecCcc---------eE--EecccccccccCCCCCHHHHHH
Q 007212 483 IPSR-FEPCGLIQLHAMRYGTVPIVASTGGL-----VDTVEEGFT---------GF--QMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 483 ~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~-----~e~v~~g~~---------G~--~~~~~~~~~~~v~~~d~~~la~ 545 (612)
=... +| |=+.+||++.|+|.|-...... .++.++..+ .. .+|.-+| -.||-.|.+++.+
T Consensus 347 GlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhV--ytVd~~n~~~v~~ 422 (559)
T PF15024_consen 347 GLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHV--YTVDINNSTEVEA 422 (559)
T ss_pred ecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeE--EEEcCCCHHHHHH
Confidence 4432 23 4468999999999987764211 111211000 00 1221111 1468999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+|+++++..-+ -.+--.||-+.+.++...+++
T Consensus 423 Avk~il~~~v~--------Py~P~efT~egmLeRv~~~ie 454 (559)
T PF15024_consen 423 AVKAILATPVE--------PYLPYEFTCEGMLERVNALIE 454 (559)
T ss_pred HHHHHHhcCCC--------CcCCcccCHHHHHHHHHHHHH
Confidence 99999997311 112356777887777766665
No 212
>PRK10037 cell division protein; Provisional
Probab=53.31 E-value=14 Score=36.89 Aligned_cols=36 Identities=28% Similarity=0.421 Sum_probs=26.5
Q ss_pred ceEEEEEecccCccccccHHH--HhhchHHHHHhCCCeEEEEEe
Q 007212 85 LNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~--~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|||+-|... .||+|. .+.+|+.+|+++|++|.+|=.
T Consensus 1 ~~~iav~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID~ 38 (250)
T PRK10037 1 MAILGLQGV------RGGVGTTSITAALAWSLQMLGENVLVIDA 38 (250)
T ss_pred CcEEEEecC------CCCccHHHHHHHHHHHHHhcCCcEEEEeC
Confidence 666555543 566654 557899999999999998843
No 213
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=53.05 E-value=22 Score=34.20 Aligned_cols=41 Identities=17% Similarity=0.321 Sum_probs=31.0
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..||++.|+..- + .-|-...+.+|+.+|+++|++|.+|=..
T Consensus 15 ~~~kvI~v~s~k-g---G~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 15 AEIKVLLITSVK-P---GEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred CCCcEEEEecCC-C---CCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 348888887541 1 3466778999999999999999888543
No 214
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=52.44 E-value=1.7e+02 Score=28.37 Aligned_cols=106 Identities=15% Similarity=0.100 Sum_probs=64.9
Q ss_pred EEEEccCcc--ccCHHHHHHHHHhcccCCeEEEEEecCC---hhHHHHHHHHHHHC-CCceEEEeccChHHHHHHHHhcc
Q 007212 406 IGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGK---KPMEKQLEQLEILY-PEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 406 i~~iGrl~~--~Kg~d~li~A~~~l~~~~~~lvivG~g~---~~~~~~l~~l~~~~-~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
++.-|.... ..+.+.+.+.+..+.+++.+++++.+.. +++...+.+.-.++ +-.+..+..++.+...+.+..||
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad 82 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLTKARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEAD 82 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhccCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCC
Confidence 444444443 4577777777777755678899998864 34444444444455 43344333333344457889999
Q ss_pred EEEEcCC--------CCCCcH--HHHHHHHcCCceEEcCCCC
Q 007212 480 FILIPSR--------FEPCGL--IQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 480 v~v~pS~--------~E~~gl--~~lEAma~G~PvI~s~~gg 511 (612)
++++|-- +...++ .+-++...|+|++.++.|.
T Consensus 83 ~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 83 VIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred EEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 9999962 112232 3445566799999888664
No 215
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=51.80 E-value=76 Score=30.11 Aligned_cols=98 Identities=18% Similarity=0.205 Sum_probs=60.6
Q ss_pred CHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCC-ceEEE-eccChHHHH----HH-HHhccEEEEcCC---
Q 007212 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGV-AKFNIPLAH----MI-IAGADFILIPSR--- 486 (612)
Q Consensus 417 g~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~-~~~~~~~~~----~i-~~~aDv~v~pS~--- 486 (612)
|.|++.+.++...+.+.++.++|..+...++..+.+..++|+ ++... +.|+.++.. .+ -.++|++++---
T Consensus 33 G~dl~~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~Pk 112 (177)
T TIGR00696 33 GPDLMEELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVGLGCPK 112 (177)
T ss_pred hHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCCcH
Confidence 889999999888667889999999888888888999989984 33333 344433222 22 246788886542
Q ss_pred CCCCcHHHHHHHHcCCceEEcCCCCccccee
Q 007212 487 FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 517 (612)
Q Consensus 487 ~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 517 (612)
.|-+-... .-....+++ -.+||.-|+..
T Consensus 113 QE~~~~~~--~~~~~~~v~-~gvGg~fd~~a 140 (177)
T TIGR00696 113 QEIWMRNH--RHLKPDAVM-IGVGGSFDVFS 140 (177)
T ss_pred hHHHHHHh--HHhCCCcEE-EEeceeeeecc
Confidence 23222111 112233333 34777777653
No 216
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=51.55 E-value=3.6e+02 Score=29.47 Aligned_cols=165 Identities=15% Similarity=0.172 Sum_probs=100.2
Q ss_pred EEccCccccCHHHHHHHHHhcccCCeEEEEEecC-----ChhHHHHHHHHHHH-CCCceEEEecc-ChHH----HHHHHH
Q 007212 408 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG-----KKPMEKQLEQLEIL-YPEKARGVAKF-NIPL----AHMIIA 476 (612)
Q Consensus 408 ~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g-----~~~~~~~l~~l~~~-~~~~v~~~~~~-~~~~----~~~i~~ 476 (612)
|.+.-..++=+++.-+++++++.....++|+-+. ++++.++++++... .|+.+.+++.- .+++ +..+-.
T Consensus 158 ~f~~~~~~~Pv~Iak~al~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e 237 (451)
T COG0541 158 FFGSGTEKDPVEIAKAALEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNE 237 (451)
T ss_pred eecCCCCCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhh
Confidence 3444234445667788888887777777888762 25677777777665 46666666543 2332 334444
Q ss_pred hccE-EEEcCCCC--CCcHHHHH-HHHcCCceEEcCCCCcccceec----CcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 477 GADF-ILIPSRFE--PCGLIQLH-AMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 477 ~aDv-~v~pS~~E--~~gl~~lE-Ama~G~PvI~s~~gg~~e~v~~----g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
+.++ .|+-+..+ +-|-..|- .-..|+|+---.+|.-.+-++. -....+. --+|+..|.+.++
T Consensus 238 ~l~itGvIlTKlDGdaRGGaALS~~~~tg~PIkFiGtGEki~dLE~F~P~R~asRIL----------GMGDv~sLvEk~~ 307 (451)
T COG0541 238 ALGITGVILTKLDGDARGGAALSARAITGKPIKFIGTGEKIDDLEPFHPDRFASRIL----------GMGDVLSLIEKAE 307 (451)
T ss_pred hcCCceEEEEcccCCCcchHHHhhHHHHCCCeEEEecCCCcccCCCcChHHHHHHhc----------CcccHHHHHHHHH
Confidence 4455 33444443 34444333 3467999876666543332221 1111111 3388999999998
Q ss_pred HHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 549 RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 549 ~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+.++. +..+++.+.-..-.|+.+.+.+++.++-.
T Consensus 308 ~~~d~---e~a~~~~~kl~~g~FtL~Df~~Ql~~m~k 341 (451)
T COG0541 308 EVVDE---EEAEKLAEKLKKGKFTLEDFLEQLEQMKK 341 (451)
T ss_pred HhhhH---HHHHHHHHHHHhCCCCHHHHHHHHHHHHc
Confidence 88874 45566666666777999999999888643
No 217
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=50.89 E-value=85 Score=35.54 Aligned_cols=181 Identities=16% Similarity=0.049 Sum_probs=104.3
Q ss_pred HHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEec---CChhHHHHHHHHHHHCCCceEEEec
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGT---GKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~---g~~~~~~~l~~l~~~~~~~v~~~~~ 465 (612)
.+..++||.+. +++..+..| +|==...++.+.++.+ |+-.|++.-- |...+...+++++.+ ++++.+..-
T Consensus 749 ~r~~y~Lp~d~--vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~-p~riifs~v 823 (966)
T KOG4626|consen 749 TRSQYGLPEDA--VVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLE-PDRIIFSPV 823 (966)
T ss_pred CCCCCCCCCCe--EEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCC-ccceeeccc
Confidence 46778998653 555555554 3333345555555544 6766665543 333345555555443 356665544
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCccccee-----cCcceEEecccccccccCCCCCH
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-----EGFTGFQMGSFSVDCEAVDPVDV 540 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~-----~g~~G~~~~~~~~~~~~v~~~d~ 540 (612)
-..++-..-.+-+|+.+-+...-| -.+-+|.+..|+|+|+-...-+..-|. .-+.|-+ -..+-
T Consensus 824 a~k~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hl-----------iak~~ 891 (966)
T KOG4626|consen 824 AAKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHL-----------IAKNR 891 (966)
T ss_pred cchHHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHH-----------HhhhH
Confidence 444443356778899886665432 134578899999999876432222111 1112222 23556
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHH---H--HhhcCcHHHHHHHHHHHHHHHHc
Q 007212 541 AAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 541 ~~la~~i~~ll~~~~~~~~~~~~~~~---~--~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++..+.-.++-.+ .+.++++...- + ..-|+-.+.+..++++|.++.+.
T Consensus 892 eEY~~iaV~Latd--~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 892 EEYVQIAVRLATD--KEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred HHHHHHHHHhhcC--HHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 6666666666665 44444443332 2 35688899999999999999875
No 218
>PRK09739 hypothetical protein; Provisional
Probab=50.41 E-value=30 Score=33.27 Aligned_cols=43 Identities=16% Similarity=0.178 Sum_probs=30.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+.|||++|... |. ..+-....+..+.+++.+.||+|.++-..
T Consensus 1 ~~mmkiliI~~s--p~-~~s~s~~l~~~~~~~~~~~g~~v~~~dL~ 43 (199)
T PRK09739 1 MQSMRIYLVWAH--PR-HDSLTAKVAEAIHQRAQERGHQVEELDLY 43 (199)
T ss_pred CCCceEEEEEcC--CC-CCCcHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 346999999875 53 22334556666777888899999988643
No 219
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=50.39 E-value=15 Score=40.65 Aligned_cols=146 Identities=21% Similarity=0.190 Sum_probs=95.2
Q ss_pred hccHHHHHH----HHHHhCCCCCCCCcEEEEEccCccccC----HHHHHHHHHhccc-C----CeEEEEEecCC-h--hH
Q 007212 382 DAKPLLKEA----LQAEVGLPVDRNIPVIGFIGRLEEQKG----SDILAAAIPHFIK-E----NVQIIVLGTGK-K--PM 445 (612)
Q Consensus 382 ~~~~~~~~~----l~~~~gl~~~~~~~~i~~iGrl~~~Kg----~d~li~A~~~l~~-~----~~~lvivG~g~-~--~~ 445 (612)
.+|..+|.. +.+++|...+++...=+.+-|+.++|. +--++-.+.++++ + --+.+++|... + .+
T Consensus 538 ~vK~~NKlk~a~~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~e~~k~fvprtvm~GGKaapgY~m 617 (843)
T KOG2099|consen 538 KVKQENKLKLAAYLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKEEPAKAFVPRTVMIGGKAAPGYHM 617 (843)
T ss_pred HHHHhhHHHHHHHHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCceEEEEcCccCchhHH
Confidence 444444433 345666655554444456888888884 3344555555554 2 23556777532 1 23
Q ss_pred HHHHHHHHH----HC---C-----CceEEEeccChHHHHHHHHhccEEEEcC--CCCCCcHHHHHHHHcCCceEEcCCCC
Q 007212 446 EKQLEQLEI----LY---P-----EKARGVAKFNIPLAHMIIAGADFILIPS--RFEPCGLIQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 446 ~~~l~~l~~----~~---~-----~~v~~~~~~~~~~~~~i~~~aDv~v~pS--~~E~~gl~~lEAma~G~PvI~s~~gg 511 (612)
.+++-++.. .. | .+|.|+..+....+..++.++|+-=.-| -.|+.|..=+.-|..|+-.|.|-.|.
T Consensus 618 AK~Iiklit~V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGA 697 (843)
T KOG2099|consen 618 AKLIIKLITAVADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGA 697 (843)
T ss_pred HHHHHHHHHHHHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEeccccc
Confidence 344444332 11 1 2688888888888888999999864444 46999999999999999999999999
Q ss_pred cccceec--CcceEEecc
Q 007212 512 LVDTVEE--GFTGFQMGS 527 (612)
Q Consensus 512 ~~e~v~~--g~~G~~~~~ 527 (612)
.+|+-++ ..|=|+||.
T Consensus 698 NVEm~eE~GeeN~FiFG~ 715 (843)
T KOG2099|consen 698 NVEMAEEAGEENFFIFGM 715 (843)
T ss_pred chHHHHHcCcccEEEecc
Confidence 8887765 256788884
No 220
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=50.37 E-value=18 Score=37.43 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=26.2
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++++ .|++|.++.. .|++.||+|++++..
T Consensus 2 ~m~I~IiG--------aGaiG~~~a~---~L~~~G~~V~lv~r~ 34 (305)
T PRK05708 2 SMTWHILG--------AGSLGSLWAC---RLARAGLPVRLILRD 34 (305)
T ss_pred CceEEEEC--------CCHHHHHHHH---HHHhCCCCeEEEEec
Confidence 69999998 4778765444 478899999999875
No 221
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=49.71 E-value=1.4e+02 Score=27.90 Aligned_cols=99 Identities=22% Similarity=0.312 Sum_probs=61.7
Q ss_pred cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEe----ccChHH----HHHH-HHhccEEEEc
Q 007212 414 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA----KFNIPL----AHMI-IAGADFILIP 484 (612)
Q Consensus 414 ~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~----~~~~~~----~~~i-~~~aDv~v~p 484 (612)
.--|.|.+.+.++...+.+.++.++|+.+...++..+.+...+|+ +...+ .|..++ +..+ -..+|++++-
T Consensus 28 r~~g~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~-l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vg 106 (171)
T cd06533 28 RVTGSDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPG-LKIVGYHHGYFGPEEEEEIIERINASGADILFVG 106 (171)
T ss_pred ccCcHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCC-cEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEE
Confidence 456899999999998777899999999887788888888888884 33333 333222 2222 2467888875
Q ss_pred CC---CCCCcHHHHHHHHcCCceEEcCCCCcccce
Q 007212 485 SR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTV 516 (612)
Q Consensus 485 S~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v 516 (612)
.- .|-|.....+.+ ..+++. .+||.-|+.
T Consensus 107 lG~PkQE~~~~~~~~~l--~~~v~~-~vG~~~d~~ 138 (171)
T cd06533 107 LGAPKQELWIARHKDRL--PVPVAI-GVGGSFDFL 138 (171)
T ss_pred CCCCHHHHHHHHHHHHC--CCCEEE-EeceeeEec
Confidence 43 244443333333 233333 366665554
No 222
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=49.45 E-value=17 Score=37.83 Aligned_cols=76 Identities=24% Similarity=0.426 Sum_probs=41.0
Q ss_pred ceEEEEEecccCccccccHHHH--hhchHHHHHhCCCeEEEEEecCC-ccccccCccEEEEEEeCCeeeEEEEEEeeecC
Q 007212 85 LNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAPRYD-QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~--~~~L~~~L~~~Gh~V~vit~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
|||+|++. .||+|.- ...+|..++++|++|.+++.... ...+.+... +++. ..++ .-.++
T Consensus 1 ~r~~~~~G-------KGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~~L~d~l~~~------~~~~--~~~v--~~~~~ 63 (305)
T PF02374_consen 1 MRILFFGG-------KGGVGKTTVAAALALALARRGKRTLLVSTDPAHSLSDVLGQK------LGGE--PTKV--EGVPN 63 (305)
T ss_dssp -SEEEEEE-------STTSSHHHHHHHHHHHHHHTTS-EEEEESSTTTHHHHHHTS--------BSS---EEE--TTCSS
T ss_pred CeEEEEec-------CCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCccHHHHhCCc------CCCC--CeEe--cCCCC
Confidence 89999985 3666554 45588889999999999986633 333433331 1111 1110 01245
Q ss_pred ceEEEEeCcccccccc
Q 007212 162 VDRVFVDHPWFLAKVW 177 (612)
Q Consensus 162 v~~~~v~~~~~~~~~~ 177 (612)
....-+|....+++.|
T Consensus 64 L~a~eid~~~~~~~~~ 79 (305)
T PF02374_consen 64 LSAMEIDPEAELEEYW 79 (305)
T ss_dssp EEEEE--HHHHHHHHH
T ss_pred ceeeecCHHHHHHHHH
Confidence 6666677666666555
No 223
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=48.78 E-value=18 Score=36.22 Aligned_cols=38 Identities=24% Similarity=0.285 Sum_probs=28.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..- =.+.-+..|.++|.+.| +|+|++|..++
T Consensus 1 M~ILltNDDG-------i~a~Gi~aL~~~l~~~g-~V~VvAP~~~~ 38 (244)
T TIGR00087 1 MKILLTNDDG-------IHSPGIRALYQALKELG-EVTVVAPARQR 38 (244)
T ss_pred CeEEEECCCC-------CCCHhHHHHHHHHHhCC-CEEEEeCCCCc
Confidence 8999888762 22334678999999998 99999998543
No 224
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=48.51 E-value=22 Score=36.69 Aligned_cols=38 Identities=18% Similarity=0.264 Sum_probs=28.2
Q ss_pred CCCceEEEEEecccCccccccHH--HHhhchHHHHHhCCCeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~--~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|.+|||+-|. . .||+| +.+.+|+.+|++.|++|-+|=.
T Consensus 1 ~~~~~~iai~-~------KGGvGKTt~~~nLa~~la~~g~kVLliD~ 40 (295)
T PRK13234 1 MSKLRQIAFY-G------KGGIGKSTTSQNTLAALVEMGQKILIVGC 40 (295)
T ss_pred CCcceEEEEE-C------CCCccHHHHHHHHHHHHHHCCCeEEEEec
Confidence 4578866664 2 45555 4568899999999999988853
No 225
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=48.24 E-value=25 Score=32.57 Aligned_cols=38 Identities=13% Similarity=0.174 Sum_probs=31.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||+|++-+. ..|-.......++..|.+.||+|.+.-..
T Consensus 1 Mk~LIlYst-----r~GqT~kIA~~iA~~L~e~g~qvdi~dl~ 38 (175)
T COG4635 1 MKTLILYST-----RDGQTRKIAEYIASHLRESGIQVDIQDLH 38 (175)
T ss_pred CceEEEEec-----CCCcHHHHHHHHHHHhhhcCCeeeeeehh
Confidence 888888653 47888889999999999999999987543
No 226
>PLN03015 UDP-glucosyl transferase
Probab=47.29 E-value=3.6e+02 Score=29.90 Aligned_cols=72 Identities=17% Similarity=0.170 Sum_probs=43.7
Q ss_pred HHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccce-ecCcceEEecccccccccCCCCCHHHHHHHH
Q 007212 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i 547 (612)
++++..+..+-+. || ++.+||+.+|+|+|+-...+ ....+ +.-..|.-+.....+ ..-..++++++|
T Consensus 348 vL~h~~vg~fvtH---~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~----~~v~~e~i~~~v 420 (470)
T PLN03015 348 ILSHRSIGGFLSH---CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSE----KVIGREEVASLV 420 (470)
T ss_pred HhccCccCeEEec---CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccC----CccCHHHHHHHH
Confidence 6777666444444 44 47999999999999886432 22233 333456544100000 123668999999
Q ss_pred HHHHH
Q 007212 548 RRALA 552 (612)
Q Consensus 548 ~~ll~ 552 (612)
++++.
T Consensus 421 ~~lm~ 425 (470)
T PLN03015 421 RKIVA 425 (470)
T ss_pred HHHHc
Confidence 99995
No 227
>PRK09271 flavodoxin; Provisional
Probab=46.66 E-value=32 Score=31.85 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=30.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
|||+++-.. .+|-.+.+...++..|.+.|++|.+.-
T Consensus 1 mkv~IvY~S-----~tGnTe~~A~~ia~~l~~~g~~v~~~~ 36 (160)
T PRK09271 1 MRILLAYAS-----LSGNTREVAREIEERCEEAGHEVDWVE 36 (160)
T ss_pred CeEEEEEEc-----CCchHHHHHHHHHHHHHhCCCeeEEEe
Confidence 888888753 379999999999999999999987654
No 228
>TIGR01380 glut_syn glutathione synthetase, prokaryotic. This model was built using glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions.
Probab=46.34 E-value=18 Score=37.70 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=30.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+|+-. |.....--.+.+..|..+.+++||+|.++.|.
T Consensus 1 m~~~~~~~---~~~~~~~~~~st~~L~~aa~~rG~~v~~~~~~ 40 (312)
T TIGR01380 1 LKVAFQMD---PIESINIGKDTTFALMEEAQKRGHELFFYEPG 40 (312)
T ss_pred CeEEEEeC---CHHHCCCCcChHHHHHHHHHHcCCEEEEEehh
Confidence 89999985 33222223446778999999999999999987
No 229
>PLN02534 UDP-glycosyltransferase
Probab=46.15 E-value=4.6e+02 Score=29.21 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=30.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
+++|+++- +| .-|--.-+.+|++.|+.+|+.|+++++..
T Consensus 8 ~~Hvv~vP---fp---aqGHi~P~l~LAk~La~~G~~vT~v~t~~ 46 (491)
T PLN02534 8 QLHFVLIP---LM---AQGHMIPMIDMARLLAERGVIVSLVTTPQ 46 (491)
T ss_pred CCEEEEEC---CC---CcchHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 46887776 34 34566677899999999999999999764
No 230
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=45.83 E-value=27 Score=34.02 Aligned_cols=35 Identities=29% Similarity=0.513 Sum_probs=24.8
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|+|++.+. .||+| ..+++.|+++||+|.++...
T Consensus 4 ~~~~ilItGa-------sg~iG---~~l~~~l~~~g~~v~~~~r~ 38 (246)
T PRK05653 4 QGKTALVTGA-------SRGIG---RAIALRLAADGAKVVIYDSN 38 (246)
T ss_pred CCCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3456766653 46666 56888899999998666644
No 231
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=45.62 E-value=30 Score=35.12 Aligned_cols=27 Identities=33% Similarity=0.571 Sum_probs=23.5
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEecCC
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~ 129 (612)
++|+| .++++.|+++||+|.+++.+-+
T Consensus 15 SsGIG---~~~A~~lA~~g~~liLvaR~~~ 41 (265)
T COG0300 15 SSGIG---AELAKQLARRGYNLILVARRED 41 (265)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCcHH
Confidence 58888 6899999999999999987755
No 232
>PRK12827 short chain dehydrogenase; Provisional
Probab=44.81 E-value=27 Score=34.16 Aligned_cols=35 Identities=31% Similarity=0.502 Sum_probs=26.4
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+++|+|++++. .||+| ..+++.|+++||+|.++..
T Consensus 4 ~~~~~ilItGa-------sg~iG---~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 4 LDSRRVLITGG-------SGGLG---RAIAVRLAADGADVIVLDI 38 (249)
T ss_pred cCCCEEEEECC-------CChHH---HHHHHHHHHCCCeEEEEcC
Confidence 34678877664 47777 5788999999999988763
No 233
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=44.72 E-value=24 Score=37.02 Aligned_cols=33 Identities=33% Similarity=0.368 Sum_probs=25.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 2 ~mkI~IiG~--------G~mG---~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 2 MARICVLGA--------GSIG---CYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred CceEEEECC--------CHHH---HHHHHHHHhcCCcEEEEecH
Confidence 489999983 5555 45777799999999998753
No 234
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=44.42 E-value=28 Score=36.13 Aligned_cols=34 Identities=32% Similarity=0.385 Sum_probs=26.0
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+|||+|++. |-. -..++..|+++||+|+++...
T Consensus 3 ~~m~I~iiG~--------G~~---G~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 3 QPKTIAILGA--------GAW---GSTLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCEEEEECc--------cHH---HHHHHHHHHHCCCEEEEEeCC
Confidence 4799999873 333 357888899999999887654
No 235
>PRK06756 flavodoxin; Provisional
Probab=43.75 E-value=37 Score=30.80 Aligned_cols=37 Identities=5% Similarity=0.161 Sum_probs=31.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|||++|-.. .+|-.+.+...+++.|.+.|++|.++-.
T Consensus 2 mkv~IiY~S-----~tGnTe~vA~~ia~~l~~~g~~v~~~~~ 38 (148)
T PRK06756 2 SKLVMIFAS-----MSGNTEEMADHIAGVIRETENEIEVIDI 38 (148)
T ss_pred ceEEEEEEC-----CCchHHHHHHHHHHHHhhcCCeEEEeeh
Confidence 788888743 3799999999999999999999987754
No 236
>PLN02240 UDP-glucose 4-epimerase
Probab=43.48 E-value=29 Score=36.34 Aligned_cols=35 Identities=29% Similarity=0.372 Sum_probs=25.4
Q ss_pred cCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
++++++|++.+. +|++| ..|++.|.++||+|+++.
T Consensus 2 ~~~~~~vlItGa-------tG~iG---~~l~~~L~~~g~~V~~~~ 36 (352)
T PLN02240 2 SLMGRTILVTGG-------AGYIG---SHTVLQLLLAGYKVVVID 36 (352)
T ss_pred CCCCCEEEEECC-------CChHH---HHHHHHHHHCCCEEEEEe
Confidence 455677776553 46665 567888999999998876
No 237
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=43.42 E-value=30 Score=33.70 Aligned_cols=35 Identities=29% Similarity=0.395 Sum_probs=24.9
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+.|+|++++. +||+| ..|++.|.++||+|.+++.+
T Consensus 5 ~~~~vlItGa-------sg~iG---~~l~~~l~~~g~~v~~~~~~ 39 (249)
T PRK12825 5 MGRVALVTGA-------ARGLG---RAIALRLARAGADVVVHYRS 39 (249)
T ss_pred CCCEEEEeCC-------CchHH---HHHHHHHHHCCCeEEEEeCC
Confidence 3456776654 46666 57888899999999776654
No 238
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=43.09 E-value=27 Score=34.18 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=23.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+||+ |.|.+-..|+..|++.||+|+++...
T Consensus 1 MkI~IIG----------G~G~mG~ala~~L~~~G~~V~v~~r~ 33 (219)
T TIGR01915 1 MKIAVLG----------GTGDQGKGLALRLAKAGNKIIIGSRD 33 (219)
T ss_pred CEEEEEc----------CCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 7787764 22334467888899999999887544
No 239
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=42.89 E-value=35 Score=34.19 Aligned_cols=39 Identities=23% Similarity=0.298 Sum_probs=28.0
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||++.|.. + ...-|..+.+.+|+.+|++.|++|.+|=..
T Consensus 1 M~~iai~s---~-kGGvG~TTltAnLA~aL~~~G~~VlaID~d 39 (243)
T PF06564_consen 1 MKVIAIVS---P-KGGVGKTTLTANLAWALARLGESVLAIDLD 39 (243)
T ss_pred CcEEEEec---C-CCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 77666663 2 112355568889999999999999988543
No 240
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=42.51 E-value=24 Score=35.51 Aligned_cols=38 Identities=26% Similarity=0.463 Sum_probs=28.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..-.. .-| +..|+++|.+ +|+|+|++|.-++
T Consensus 1 M~ILvtNDDGi~---apG----l~aL~~~l~~-~~~V~VvAP~~~~ 38 (253)
T PRK13933 1 MNILLTNDDGIN---AEG----INTLAELLSK-YHEVIIVAPENQR 38 (253)
T ss_pred CeEEEEcCCCCC---Chh----HHHHHHHHHh-CCcEEEEccCCCC
Confidence 899999987332 234 5678888876 6899999998554
No 241
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=42.25 E-value=24 Score=35.48 Aligned_cols=38 Identities=26% Similarity=0.405 Sum_probs=27.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..-.- .-| +..|.++|++ +|+|+|++|..+|
T Consensus 1 M~ILlTNDDGi~---a~G----i~aL~~~l~~-~~~V~VvAP~~~q 38 (253)
T PRK13935 1 MNILVTNDDGIT---SPG----IIILAEYLSE-KHEVFVVAPDKER 38 (253)
T ss_pred CeEEEECCCCCC---CHH----HHHHHHHHHh-CCcEEEEccCCCC
Confidence 899999876322 223 5678888875 5899999998654
No 242
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=41.93 E-value=26 Score=35.93 Aligned_cols=31 Identities=29% Similarity=0.515 Sum_probs=24.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|||++++. |.+| ..++..|++.||+|++++.
T Consensus 1 mkI~IiG~--------G~iG---~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVGA--------GAVG---GTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEECC--------CHHH---HHHHHHHHHCCCceEEEec
Confidence 78999873 5555 3567778999999999876
No 243
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=41.92 E-value=40 Score=34.66 Aligned_cols=44 Identities=11% Similarity=-0.052 Sum_probs=31.8
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|++|||++++....|. ..=.-.....+.++|.+.||+|.++-+.
T Consensus 2 ~~~~~v~~~~g~~~~~--~~~~~~s~~~i~~al~~~g~~v~~i~~~ 45 (304)
T PRK01372 2 KMFGKVAVLMGGTSAE--REVSLNSGAAVLAALREAGYDAHPIDPG 45 (304)
T ss_pred CCCcEEEEEeCCCCCC--ceEeHHhHHHHHHHHHHCCCEEEEEecC
Confidence 5678999998665553 1211224478999999999999999655
No 244
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=41.68 E-value=25 Score=35.25 Aligned_cols=38 Identities=29% Similarity=0.459 Sum_probs=28.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..- .+ .-| +..|+++|. .+++|+|++|..++
T Consensus 1 mrILlTNDDG-i~--a~G----i~aL~~al~-~~~dV~VVAP~~~q 38 (252)
T COG0496 1 MRILLTNDDG-IH--APG----IRALARALR-EGADVTVVAPDREQ 38 (252)
T ss_pred CeEEEecCCc-cC--CHH----HHHHHHHHh-hCCCEEEEccCCCC
Confidence 8999998762 22 223 557888888 89999999998553
No 245
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=40.94 E-value=1.1e+02 Score=30.70 Aligned_cols=97 Identities=18% Similarity=0.187 Sum_probs=59.9
Q ss_pred CHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEE--EeccChHHHH----HH-HHhccEEEEcCC---
Q 007212 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG--VAKFNIPLAH----MI-IAGADFILIPSR--- 486 (612)
Q Consensus 417 g~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~--~~~~~~~~~~----~i-~~~aDv~v~pS~--- 486 (612)
|.|++.+.++...+.+.++.++|..+...++..+.+..+++.++.+ .+.|+.++.. .+ -..+|++++---
T Consensus 90 G~dl~~~ll~~~~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~Pk 169 (243)
T PRK03692 90 GADLWEALMARAGKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSPK 169 (243)
T ss_pred hHHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCcH
Confidence 8999999888876667899999988877777888887777544432 3445433322 22 347898887542
Q ss_pred CCCCcHHHHHHHHcCCceEEcCCCCcccce
Q 007212 487 FEPCGLIQLHAMRYGTVPIVASTGGLVDTV 516 (612)
Q Consensus 487 ~E~~gl~~lEAma~G~PvI~s~~gg~~e~v 516 (612)
.|-|-....+ ..+.++ .-.+||.-|++
T Consensus 170 QE~~~~~~~~--~~~~~v-~~gvGg~fD~~ 196 (243)
T PRK03692 170 QEIFMRDCRL--VYPDAL-YMGVGGTYDVF 196 (243)
T ss_pred HHHHHHHHHH--hCCCCE-EEEeCeEEEEe
Confidence 2444322222 123444 33467766664
No 246
>PRK07454 short chain dehydrogenase; Provisional
Probab=40.47 E-value=34 Score=33.49 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=26.5
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+..||.++|+.. .||+| ..+++.|.++|++|.++...
T Consensus 3 ~~~~k~vlItG~------sg~iG---~~la~~l~~~G~~V~~~~r~ 39 (241)
T PRK07454 3 LNSMPRALITGA------SSGIG---KATALAFAKAGWDLALVARS 39 (241)
T ss_pred CCCCCEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 345777777632 46666 57888899999999887744
No 247
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=40.12 E-value=38 Score=36.11 Aligned_cols=36 Identities=22% Similarity=0.298 Sum_probs=27.2
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|||++.+ |.|.+-..|++.|.++||+|..+...
T Consensus 19 ~~~~~IlVtG----------gtGfIG~~l~~~L~~~G~~V~~v~r~ 54 (370)
T PLN02695 19 SEKLRICITG----------AGGFIASHIARRLKAEGHYIIASDWK 54 (370)
T ss_pred CCCCEEEEEC----------CccHHHHHHHHHHHhCCCEEEEEEec
Confidence 4679998764 44445578999999999999988743
No 248
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=39.76 E-value=33 Score=35.15 Aligned_cols=32 Identities=41% Similarity=0.700 Sum_probs=24.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++. |.+| ..++..|++.||+|+++..+
T Consensus 1 m~I~IiG~--------G~~G---~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 1 MKIAILGA--------GAIG---GLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 78888883 5555 45677789999999999864
No 249
>PRK13849 putative crown gall tumor protein VirC1; Provisional
Probab=38.80 E-value=37 Score=33.67 Aligned_cols=37 Identities=35% Similarity=0.521 Sum_probs=27.4
Q ss_pred ceEEEEEecccCccccccHHHH--hhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~--~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+-|... .||+|.- ...|+.+|+++|++|.++=..
T Consensus 1 M~iI~v~n~------KGGvGKTT~a~nLA~~la~~G~~VlliD~D 39 (231)
T PRK13849 1 MKLLTFCSF------KGGAGKTTALMGLCAALASDGKRVALFEAD 39 (231)
T ss_pred CeEEEEECC------CCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 666666543 5776654 567999999999999988654
No 250
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=38.58 E-value=5.5e+02 Score=28.05 Aligned_cols=83 Identities=7% Similarity=0.023 Sum_probs=51.7
Q ss_pred CcHHHHHHHHcCCceEEcCCCCcccceecC----cceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH
Q 007212 490 CGLIQLHAMRYGTVPIVASTGGLVDTVEEG----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 565 (612)
Q Consensus 490 ~gl~~lEAma~G~PvI~s~~gg~~e~v~~g----~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~ 565 (612)
.|..+--+...|+|+....+|.-.+-++.- ....+ ..-+|+..|++.+++.++. +..+++.++
T Consensus 255 ~G~~lsi~~~~~~PI~fi~~Ge~i~dl~~f~p~~~~~~i----------Lg~gD~~~l~e~~~~~~~~---~~~~~~~~~ 321 (428)
T TIGR00959 255 GGAALSVRSVTGKPIKFIGVGEKIDDLEPFHPERMASRI----------LGMGDILSLVEKAQEVVDE---EEAKKLAEK 321 (428)
T ss_pred ccHHHHHHHHHCcCEEEEeCCCChhhCccCCHHHHHHHH----------hCCCChHHHHHHHHHhhCH---HHHHHHHHH
Confidence 455555556789999887776433322211 11121 2457888888888887654 233444444
Q ss_pred HHHhhcCcHHHHHHHHHHHH
Q 007212 566 GMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 566 ~~~~~fsw~~~a~~~~~~y~ 585 (612)
-....|+.+.+.+++.++-.
T Consensus 322 ~~~~~f~l~d~~~q~~~~~k 341 (428)
T TIGR00959 322 MKKGQFDLEDFLEQLRQIKK 341 (428)
T ss_pred HHhCCCCHHHHHHHHHHHHh
Confidence 45577999998888887654
No 251
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=38.58 E-value=25 Score=34.23 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=31.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
|.+++++. +| ..|-..+..+|+++|.+++|+|..++..|
T Consensus 1 mpLiIlTG--yP---gsGKTtfakeLak~L~~~i~~vi~l~kdy 39 (261)
T COG4088 1 MPLIILTG--YP---GSGKTTFAKELAKELRQEIWRVIHLEKDY 39 (261)
T ss_pred CceEEEec--CC---CCCchHHHHHHHHHHHHhhhhccccchhh
Confidence 55666664 36 57888899999999999999999988754
No 252
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=38.51 E-value=2.6e+02 Score=28.93 Aligned_cols=106 Identities=20% Similarity=0.216 Sum_probs=64.8
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCe
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 433 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~ 433 (612)
|.|+.|-....|... -.+--.+++.+|-- +...|.|+|-+.+.+=...++.++..+ ++
T Consensus 120 VINa~~g~~~HPtQ~----------------LaDl~Ti~e~~g~l---~g~~va~vGD~~~~~v~~Sl~~~~a~~---g~ 177 (301)
T TIGR00670 120 VINAGDGSNQHPTQT----------------LLDLYTIYEEFGRL---DGLKIALVGDLKYGRTVHSLAEALTRF---GV 177 (301)
T ss_pred EEeCCCCCCCCcHHH----------------HHHHHHHHHHhCCC---CCCEEEEEccCCCCcHHHHHHHHHHHc---CC
Confidence 567777556677532 11233455666632 337899999776667788889999888 78
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCC
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
++.+++...-+..+.+.+.+.+.+..+... +.+.+.++.||++...+.
T Consensus 178 ~v~~~~P~~~~~~~~~~~~~~~~G~~v~~~-----~d~~~a~~~aDvvyt~~~ 225 (301)
T TIGR00670 178 EVYLISPEELRMPKEILEELKAKGIKVRET-----ESLEEVIDEADVLYVTRI 225 (301)
T ss_pred EEEEECCccccCCHHHHHHHHHcCCEEEEE-----CCHHHHhCCCCEEEECCc
Confidence 999998644112233333333444333321 223357899999877654
No 253
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=38.44 E-value=93 Score=26.55 Aligned_cols=42 Identities=10% Similarity=0.276 Sum_probs=28.8
Q ss_pred HHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEE
Q 007212 420 ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 420 ~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~ 463 (612)
.+.+.+..+ |+.+++++|+....-.+...+++.++|+++..+
T Consensus 54 ~i~~i~~~f--P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai 95 (100)
T PF09949_consen 54 NIERILRDF--PERKFILIGDSGQHDPEIYAEIARRFPGRILAI 95 (100)
T ss_pred HHHHHHHHC--CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEE
Confidence 344444444 778999999965444667778888999877643
No 254
>PRK05920 aromatic acid decarboxylase; Validated
Probab=38.41 E-value=54 Score=31.92 Aligned_cols=38 Identities=16% Similarity=-0.062 Sum_probs=27.7
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|||++--.. +........+.+.|.+.||+|.|+...
T Consensus 2 ~~krIllgITG-------siaa~ka~~lvr~L~~~g~~V~vi~T~ 39 (204)
T PRK05920 2 KMKRIVLAITG-------ASGAIYGVRLLECLLAADYEVHLVISK 39 (204)
T ss_pred CCCEEEEEEeC-------HHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 46787766531 222346678999999999999999876
No 255
>PLN02778 3,5-epimerase/4-reductase
Probab=38.01 E-value=35 Score=35.16 Aligned_cols=33 Identities=21% Similarity=0.132 Sum_probs=23.5
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEE
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vi 124 (612)
.++|||++.+. .|..=..|++.|.++||+|++.
T Consensus 7 ~~~~kiLVtG~----------tGfiG~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 7 SATLKFLIYGK----------TGWIGGLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCCCeEEEECC----------CCHHHHHHHHHHHhCCCEEEEe
Confidence 45699887654 3333367888999999999753
No 256
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=38.00 E-value=4.2e+02 Score=26.90 Aligned_cols=101 Identities=13% Similarity=0.047 Sum_probs=62.1
Q ss_pred EEEccCccccCHHHHHHHHHhcccCCeEEEEEec-----------CC-hhHHHHHHHHHHHCCCceEEEeccChHHHHHH
Q 007212 407 GFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT-----------GK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 474 (612)
Q Consensus 407 ~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~-----------g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i 474 (612)
+.+..-.--...+.+++.++.+++..++++..|. |. .+..+.++++..+.+-.+ ...-++...+..+
T Consensus 29 ~~iaGPCsie~~~~~~~~A~~lk~~g~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~-~te~~d~~~~~~l 107 (266)
T PRK13398 29 IIIAGPCAVESEEQMVKVAEKLKELGVHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPV-VTEVMDTRDVEEV 107 (266)
T ss_pred EEEEeCCcCCCHHHHHHHHHHHHHcCCCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCE-EEeeCChhhHHHH
Confidence 3333334445678888888888776778888882 11 233455666666666322 2233455555555
Q ss_pred HHhccEEEEcCCC-CCCcHHHHHHHHcCCceEEcCC
Q 007212 475 IAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 475 ~~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~ 509 (612)
...+|++-++|+. +.+++ +-++-..|+||+.+.-
T Consensus 108 ~~~vd~~kIga~~~~n~~L-L~~~a~~gkPV~lk~G 142 (266)
T PRK13398 108 ADYADMLQIGSRNMQNFEL-LKEVGKTKKPILLKRG 142 (266)
T ss_pred HHhCCEEEECcccccCHHH-HHHHhcCCCcEEEeCC
Confidence 5669999999984 44332 3334467999998874
No 257
>PRK06180 short chain dehydrogenase; Provisional
Probab=37.89 E-value=44 Score=33.71 Aligned_cols=25 Identities=36% Similarity=0.566 Sum_probs=19.7
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 13 sggiG---~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 13 SSGFG---RALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CChHH---HHHHHHHHhCcCEEEEEeCC
Confidence 57777 56788899999999887754
No 258
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=37.81 E-value=2.4e+02 Score=27.55 Aligned_cols=72 Identities=15% Similarity=0.168 Sum_probs=43.1
Q ss_pred ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhccEEEEcCC
Q 007212 415 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSR 486 (612)
Q Consensus 415 ~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~i~~~aDv~v~pS~ 486 (612)
....+..++.++.+.+..++++=++-..+.-.+.++++..++|+.+.+.+.. +.+++. .+-++||+++.|..
T Consensus 23 ~~~~~~a~~i~~al~~~Gi~~iEitl~~~~~~~~I~~l~~~~p~~~IGAGTVl~~~~a~~a~~aGA~FivsP~~ 96 (212)
T PRK05718 23 INKLEDAVPLAKALVAGGLPVLEVTLRTPAALEAIRLIAKEVPEALIGAGTVLNPEQLAQAIEAGAQFIVSPGL 96 (212)
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEecCCccHHHHHHHHHHHCCCCEEEEeeccCHHHHHHHHHcCCCEEECCCC
Confidence 3455666666666655444444444333445667777777777655555555 333333 46678888888875
No 259
>PRK10481 hypothetical protein; Provisional
Probab=37.76 E-value=3.3e+02 Score=26.91 Aligned_cols=126 Identities=15% Similarity=0.074 Sum_probs=65.0
Q ss_pred chhhhccHHHHHHHHHHhCCCCC--CCCcEEEEEccC-----------ccccCHHHHHHHHHhcccCCeEEEEEecCChh
Q 007212 378 STVMDAKPLLKEALQAEVGLPVD--RNIPVIGFIGRL-----------EEQKGSDILAAAIPHFIKENVQIIVLGTGKKP 444 (612)
Q Consensus 378 ~~~~~~~~~~~~~l~~~~gl~~~--~~~~~i~~iGrl-----------~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~ 444 (612)
+.+..++......+++...--++ -+.+++++.|.+ .|.+++.-++.|+.. .-++-++..-.+.
T Consensus 66 ~~v~~s~~~v~~~lq~~i~~l~~~g~d~ivl~Ctgdfp~l~a~r~~l~~P~~~i~~lv~Al~~----g~riGVitP~~~q 141 (224)
T PRK10481 66 QQVHVSKQKVERDLQSVIEVLDNQGYDVILLLCTGEFPSLTARNAILLEPSRILPPLVAAIVG----GHQVGVIVPVEEQ 141 (224)
T ss_pred CEEEEEHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCCCccccCccccCchhhHHHHHHHhcC----CCeEEEEEeCHHH
Confidence 33444455555566655432222 244678888862 356666666666554 3466677665444
Q ss_pred HHHHHHHHHHHCCCceEEEe--c--cChHHHH----HH-HHhccEEEEcCCCCCCcHH-HHHHHHcCCceEEcCC
Q 007212 445 MEKQLEQLEILYPEKARGVA--K--FNIPLAH----MI-IAGADFILIPSRFEPCGLI-QLHAMRYGTVPIVAST 509 (612)
Q Consensus 445 ~~~~l~~l~~~~~~~v~~~~--~--~~~~~~~----~i-~~~aDv~v~pS~~E~~gl~-~lEAma~G~PvI~s~~ 509 (612)
..+..+++... +..+.+.. . -..+.+. .+ -.+||++++-...=.+... .+| -..|+|||.++.
T Consensus 142 i~~~~~kw~~~-G~~v~~~~aspy~~~~~~l~~aa~~L~~~gaD~Ivl~C~G~~~~~~~~le-~~lg~PVI~~n~ 214 (224)
T PRK10481 142 LAQQAQKWQVL-QKPPVFALASPYHGSEEELIDAGKELLDQGADVIVLDCLGYHQRHRDLLQ-KALDVPVLLSNV 214 (224)
T ss_pred HHHHHHHHHhc-CCceeEeecCCCCCCHHHHHHHHHHhhcCCCCEEEEeCCCcCHHHHHHHH-HHHCcCEEcHHH
Confidence 44444444332 33333322 1 1221222 12 2479999876652222222 333 478999998875
No 260
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=37.68 E-value=1e+02 Score=32.28 Aligned_cols=81 Identities=25% Similarity=0.400 Sum_probs=51.6
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccCh------------HHHHHHHHhccEEEE--cCCCCCCcH---HH
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI------------PLAHMIIAGADFILI--PSRFEPCGL---IQ 494 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~------------~~~~~i~~~aDv~v~--pS~~E~~gl---~~ 494 (612)
+-.+-|+|-|. .-.++.+....++-++..+..+.. +.+..+++.||++++ |..-|.-|+ ..
T Consensus 142 gkTvGIiG~G~--IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~i~~~~ 219 (324)
T COG0111 142 GKTVGIIGLGR--IGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGLINAEE 219 (324)
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcccCHHH
Confidence 44566677666 555566666666555655555422 235679999999765 555576655 47
Q ss_pred HHHHHcCCceEEcCCCCccc
Q 007212 495 LHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 495 lEAma~G~PvI~s~~gg~~e 514 (612)
+..|--|.-.|-+.-|++.+
T Consensus 220 ~a~MK~gailIN~aRG~vVd 239 (324)
T COG0111 220 LAKMKPGAILINAARGGVVD 239 (324)
T ss_pred HhhCCCCeEEEECCCcceec
Confidence 77777777666666666554
No 261
>CHL00175 minD septum-site determining protein; Validated
Probab=37.60 E-value=56 Score=33.16 Aligned_cols=47 Identities=17% Similarity=0.058 Sum_probs=31.5
Q ss_pred ccccccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 76 SLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 76 ~~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
++++.....+||+.|...- + .-|-.+++.+|+.+|++.|++|.++=.
T Consensus 6 ~~~~~~~~~~~vi~v~s~K-G---GvGKTt~a~nLA~~La~~g~~vlliD~ 52 (281)
T CHL00175 6 EDKEKSATMSRIIVITSGK-G---GVGKTTTTANLGMSIARLGYRVALIDA 52 (281)
T ss_pred hhhhhcCCCceEEEEEcCC-C---CCcHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 3444443345777776541 1 235567788999999999999988843
No 262
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=37.51 E-value=24 Score=35.83 Aligned_cols=31 Identities=32% Similarity=0.431 Sum_probs=26.8
Q ss_pred ccccHHHHhhchHHHHHhCCCeEEEEEecCC
Q 007212 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~ 129 (612)
.+||.|-+=..|+..|.+.||+|++++.+..
T Consensus 3 iTGgTGlIG~~L~~~L~~~gh~v~iltR~~~ 33 (297)
T COG1090 3 ITGGTGLIGRALTARLRKGGHQVTILTRRPP 33 (297)
T ss_pred EeccccchhHHHHHHHHhCCCeEEEEEcCCc
Confidence 4788888888899999999999999997643
No 263
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=37.50 E-value=47 Score=33.95 Aligned_cols=30 Identities=33% Similarity=0.465 Sum_probs=21.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vi 124 (612)
||||+++.. |=+ -..|.+.|.++||+|..+
T Consensus 1 MriLI~Gas-------G~l---G~~l~~~l~~~~~~v~~~ 30 (286)
T PF04321_consen 1 MRILITGAS-------GFL---GSALARALKERGYEVIAT 30 (286)
T ss_dssp EEEEEETTT-------SHH---HHHHHHHHTTTSEEEEEE
T ss_pred CEEEEECCC-------CHH---HHHHHHHHhhCCCEEEEe
Confidence 899988753 333 356778889999887666
No 264
>CHL00194 ycf39 Ycf39; Provisional
Probab=37.30 E-value=38 Score=35.04 Aligned_cols=33 Identities=15% Similarity=0.295 Sum_probs=24.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++ |.|..-..|+++|.++||+|.+++..
T Consensus 1 MkIlVtG----------atG~iG~~lv~~Ll~~g~~V~~l~R~ 33 (317)
T CHL00194 1 MSLLVIG----------ATGTLGRQIVRQALDEGYQVRCLVRN 33 (317)
T ss_pred CEEEEEC----------CCcHHHHHHHHHHHHCCCeEEEEEcC
Confidence 6776654 33434466888999999999998754
No 265
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=37.28 E-value=34 Score=34.41 Aligned_cols=38 Identities=21% Similarity=0.294 Sum_probs=28.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..-.- +.-+..|.++|.+. |+|+|++|..++
T Consensus 1 M~ILlTNDDGi~-------a~Gi~aL~~~l~~~-~~V~VvAP~~~q 38 (250)
T PRK00346 1 MRILLTNDDGIH-------APGIRALAEALREL-ADVTVVAPDRER 38 (250)
T ss_pred CeEEEECCCCCC-------ChhHHHHHHHHHhC-CCEEEEeCCCCC
Confidence 899999886322 22356888999998 799999998543
No 266
>PRK05993 short chain dehydrogenase; Provisional
Probab=37.26 E-value=45 Score=33.62 Aligned_cols=34 Identities=21% Similarity=0.381 Sum_probs=24.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.. .||+| ..+++.|+++|++|.++..+
T Consensus 4 ~k~vlItGa------sggiG---~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 4 KRSILITGC------SSGIG---AYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCEEEEeCC------CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 455555532 57777 56788899999999887654
No 267
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase
Probab=37.16 E-value=41 Score=38.91 Aligned_cols=34 Identities=24% Similarity=0.331 Sum_probs=26.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.++++|++|+.. .+|+ .+|.+|+++|++|+|+=.
T Consensus 79 ~~~~~VlIVGgG------IaGL-----alAlaL~r~Gi~V~V~Er 112 (668)
T PLN02927 79 KKKSRVLVAGGG------IGGL-----VFALAAKKKGFDVLVFEK 112 (668)
T ss_pred cCCCCEEEECCC------HHHH-----HHHHHHHhcCCeEEEEec
Confidence 457899999853 3554 478889999999999853
No 268
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=37.10 E-value=4e+02 Score=25.83 Aligned_cols=91 Identities=10% Similarity=0.090 Sum_probs=50.1
Q ss_pred cccCHHHHHHHHHhcccC--CeEEEEEecCC-hhHHHHHHHHH--HHCCCceE-EEeccChHHHHHHHHhccEEEEcCCC
Q 007212 414 EQKGSDILAAAIPHFIKE--NVQIIVLGTGK-KPMEKQLEQLE--ILYPEKAR-GVAKFNIPLAHMIIAGADFILIPSRF 487 (612)
Q Consensus 414 ~~Kg~d~li~A~~~l~~~--~~~lvivG~g~-~~~~~~l~~l~--~~~~~~v~-~~~~~~~~~~~~i~~~aDv~v~pS~~ 487 (612)
...-.+.+.+.+..+.+. .+.++.....+ ........... .....++. .....+..+...+++.||++|-....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~RlH 267 (286)
T PF04230_consen 188 NEEYIEEIAELIQRLLDKGYKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRLH 267 (286)
T ss_pred hhhHHHHHHHHHHHhhcccceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCCH
Confidence 344566667777776553 33333333322 22222222211 11112233 23333667777899999999966542
Q ss_pred CCCcHHHHHHHHcCCceEEcCC
Q 007212 488 EPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 488 E~~gl~~lEAma~G~PvI~s~~ 509 (612)
..+=|+++|+|+|+-+.
T Consensus 268 -----~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 268 -----GAILALSLGVPVIAISY 284 (286)
T ss_pred -----HHHHHHHcCCCEEEEec
Confidence 35559999999998654
No 269
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=37.06 E-value=33 Score=34.75 Aligned_cols=38 Identities=24% Similarity=0.297 Sum_probs=28.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..-.- .-| +..|.++|.+.| +|+|++|..++
T Consensus 1 M~ILlTNDDGi~---apG----i~aL~~al~~~g-~V~VvAP~~eq 38 (266)
T PRK13934 1 MKILVTNDDGVH---SPG----LRLLYEFVSPLG-EVDVVAPETPK 38 (266)
T ss_pred CeEEEEcCCCCC---CHH----HHHHHHHHHhCC-cEEEEccCCCC
Confidence 899999886322 233 568888898887 89999998544
No 270
>PRK10427 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=37.06 E-value=62 Score=28.33 Aligned_cols=39 Identities=10% Similarity=-0.072 Sum_probs=30.1
Q ss_pred CceEEEEEecccCccccccHHHHh--hchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~--~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||+.|+.. | .|-.-.|+ ..|.++-.++||++.|=+-.
T Consensus 2 ~mkivaVtac--p---~GiAht~lAAeaL~kAA~~~G~~i~VE~qg 42 (114)
T PRK10427 2 MAYLVAVTAC--V---SGVAHTYMAAERLEKLCQLEKWGVKIETQG 42 (114)
T ss_pred CceEEEEeeC--C---CcHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 3999999874 5 57666666 55778888899999988754
No 271
>PRK05246 glutathione synthetase; Provisional
Probab=37.00 E-value=29 Score=36.13 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=31.2
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||+|+-. |+....--.+.+..|+++.+++||+|.+++|.
T Consensus 1 ~~~~~~~~~---~~~~~~~~~~st~~l~~aa~~~G~~v~~~~~~ 41 (316)
T PRK05246 1 MMKVAFQMD---PIESINIKKDSTFAMMLEAQRRGHELFYYEPD 41 (316)
T ss_pred CceEEEEeC---CHHHCCCCCChHHHHHHHHHHcCCEEEEEehh
Confidence 389999985 33333333445677999999999999999987
No 272
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=36.99 E-value=2.6e+02 Score=27.00 Aligned_cols=68 Identities=21% Similarity=0.284 Sum_probs=37.6
Q ss_pred HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhccEEEEcCC
Q 007212 419 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSR 486 (612)
Q Consensus 419 d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~i~~~aDv~v~pS~ 486 (612)
+..++.++.+.+..++++=+--..+...+.++.+..++|+-+.+.+.. +.+++. .+-++|++++.|..
T Consensus 20 ~~a~~~~~al~~gGi~~iEiT~~t~~a~~~I~~l~~~~p~~~vGAGTV~~~e~a~~a~~aGA~FivSP~~ 89 (196)
T PF01081_consen 20 EDAVPIAEALIEGGIRAIEITLRTPNALEAIEALRKEFPDLLVGAGTVLTAEQAEAAIAAGAQFIVSPGF 89 (196)
T ss_dssp GGHHHHHHHHHHTT--EEEEETTSTTHHHHHHHHHHHHTTSEEEEES--SHHHHHHHHHHT-SEEEESS-
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHHCCCCeeEEEeccCHHHHHHHHHcCCCEEECCCC
Confidence 334444444444455544344333445667777777788766677766 444443 46778888888875
No 273
>COG1553 DsrE Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]
Probab=36.76 E-value=67 Score=28.52 Aligned_cols=40 Identities=18% Similarity=0.092 Sum_probs=29.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCC-CeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G-h~V~vit~~ 127 (612)
||+.++... +|+ .---......+|+++.+.| ++|.++--.
T Consensus 1 m~~~Ivvt~-ppY--g~q~a~~A~~fA~all~~gh~~v~iFly~ 41 (126)
T COG1553 1 MKYTIVVTG-PPY--GTESAFSALRFAEALLEQGHELVRLFLYQ 41 (126)
T ss_pred CeEEEEEec-CCC--ccHHHHHHHHHHHHHHHcCCeEEEEEEee
Confidence 788888876 776 2234556788999999997 567777654
No 274
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=36.75 E-value=54 Score=30.61 Aligned_cols=39 Identities=28% Similarity=0.272 Sum_probs=32.2
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|+|+-|+.+ +.+|-.+.+..|.+.|.++||+|.++=..
T Consensus 1 m~~Il~ivG~-----k~SGKTTLie~lv~~L~~~G~rVa~iKH~ 39 (161)
T COG1763 1 MMKILGIVGY-----KNSGKTTLIEKLVRKLKARGYRVATVKHA 39 (161)
T ss_pred CCcEEEEEec-----CCCChhhHHHHHHHHHHhCCcEEEEEEec
Confidence 3788877753 36778889999999999999999999754
No 275
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=36.74 E-value=44 Score=34.38 Aligned_cols=35 Identities=29% Similarity=0.535 Sum_probs=27.2
Q ss_pred ceEEEEEecccCccccccHH--HHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~--~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++.+ .||+| +.+.+|+.+|+++|++|.+|=..
T Consensus 1 m~ia~~g--------KGGVGKTTta~nLA~~La~~G~rVLlID~D 37 (290)
T CHL00072 1 MKLAVYG--------KGGIGKSTTSCNISIALARRGKKVLQIGCD 37 (290)
T ss_pred CeEEEEC--------CCCCcHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 7877776 35554 56788999999999999888643
No 276
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=36.28 E-value=43 Score=33.25 Aligned_cols=34 Identities=24% Similarity=0.299 Sum_probs=25.3
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..+++.|.++||+|.+++..
T Consensus 17 ~~~ilItGa-------sG~iG---~~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 17 TKTVFVAGA-------TGRTG---KRIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred CCeEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEecC
Confidence 478887775 46666 56777889999999887644
No 277
>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.
Probab=36.25 E-value=1e+02 Score=22.74 Aligned_cols=64 Identities=14% Similarity=0.204 Sum_probs=41.6
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+.|.+.|.-+......++++...+++++.. .++ ..++.+|.+.....- ...+|...|+|+|..+
T Consensus 2 ~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~--~~~--------~~~thvI~~~~~~~~--~~~~~~~~~~~iV~~~ 65 (72)
T cd00027 2 LTFVITGDLPSEERDELKELIEKLGGKVTS--SVS--------KKTTHVIVGSDAGPK--KLLKAIKLGIPIVTPE 65 (72)
T ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCEEec--ccc--------CCceEEEECCCCCch--HHHHHHHcCCeEecHH
Confidence 567778865334667788888888765542 111 467777777553221 2778889999888654
No 278
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=35.86 E-value=44 Score=32.95 Aligned_cols=33 Identities=27% Similarity=0.590 Sum_probs=24.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+|++++. +||+| ..+++.|.++|++|.+++.+
T Consensus 1 ~~vlItGa-------sg~iG---~~la~~l~~~G~~V~~~~r~ 33 (248)
T PRK10538 1 MIVLVTGA-------TAGFG---ECITRRFIQQGHKVIATGRR 33 (248)
T ss_pred CEEEEECC-------CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 66666654 46776 45788899999999887654
No 279
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=35.31 E-value=41 Score=34.89 Aligned_cols=31 Identities=29% Similarity=0.512 Sum_probs=23.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
|||++++. +|++| ..|++.|.++||+|.++.
T Consensus 1 m~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~ 31 (338)
T PRK10675 1 MRVLVTGG-------SGYIG---SHTCVQLLQNGHDVVILD 31 (338)
T ss_pred CeEEEECC-------CChHH---HHHHHHHHHCCCeEEEEe
Confidence 67776653 35555 568888999999998875
No 280
>PRK05693 short chain dehydrogenase; Provisional
Probab=35.10 E-value=47 Score=33.32 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=24.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.. +||+| ..+++.|+++|++|.+++..
T Consensus 1 mk~vlItGa------sggiG---~~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 1 MPVVLITGC------SSGIG---RALADAFKAAGYEVWATARK 34 (274)
T ss_pred CCEEEEecC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 566666632 57777 56788899999999887654
No 281
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=35.08 E-value=6.4e+02 Score=27.61 Aligned_cols=154 Identities=14% Similarity=0.099 Sum_probs=85.0
Q ss_pred HHHHHHHHhcccCCeEEEEEecCC-----hhHHHHHHHHHHHC-CCceEEEecc----C-hHHHHHHHH--hccEEEEcC
Q 007212 419 DILAAAIPHFIKENVQIIVLGTGK-----KPMEKQLEQLEILY-PEKARGVAKF----N-IPLAHMIIA--GADFILIPS 485 (612)
Q Consensus 419 d~li~A~~~l~~~~~~lvivG~g~-----~~~~~~l~~l~~~~-~~~v~~~~~~----~-~~~~~~i~~--~aDv~v~pS 485 (612)
....+++..+.+.+..++|+-+.. ..+.+++.++.... |+.+.++..- + .+.+..+-. ..+-+|++-
T Consensus 169 ~i~~~~l~~~~~~~~DvViIDTaGr~~~d~~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlTK 248 (429)
T TIGR01425 169 KIASEGVEKFKKENFDIIIVDTSGRHKQEDSLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIITK 248 (429)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCCCcchHHHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEEC
Confidence 444456666554556666665521 23444444444332 3334444322 1 112222222 234456555
Q ss_pred CCCC--CcHHHHHHHHcCCceEEcCCCCcccceecCc----ceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007212 486 RFEP--CGLIQLHAMRYGTVPIVASTGGLVDTVEEGF----TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 486 ~~E~--~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~----~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~ 559 (612)
.-|. .|..+-=+...|+|+..-.+|--.+-+..-. ...+ ..-+|+..|.+.+++.++. +..
T Consensus 249 lD~~argG~aLs~~~~t~~PI~fig~Ge~v~Dle~f~p~~~~~ri----------lgmgDi~~L~ek~~~~~~~---~~~ 315 (429)
T TIGR01425 249 LDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEIFKTQPFISKL----------LGMGDIEGLIDKVQDLKLD---DNE 315 (429)
T ss_pred ccCCCCccHHhhhHHHHCCCeEEEcCCCChhhcCcCChHHHHHHH----------hcCCCcHHHHHHHHHhhhH---HHH
Confidence 4443 5666666788899998777765443332211 1111 1458899999999887764 234
Q ss_pred HHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 560 AEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 560 ~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+++.++-....|+.+.+.+++.++-.
T Consensus 316 ~~~~~k~~~~~f~l~D~~~q~~~i~k 341 (429)
T TIGR01425 316 KALIEKLKEGTFTLRDMYEQFQNLLK 341 (429)
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 45555555678999998888887653
No 282
>PF02525 Flavodoxin_2: Flavodoxin-like fold; InterPro: IPR003680 This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) 1.6.99.2 from EC. These enzymes catalyse the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species []. This enzyme uses a FAD cofactor. The equation for this reaction is NAD(P)H + acceptor = NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy []. The family also includes acyl carrier protein phosphodiesterase 3.1.4.14 from EC. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP []. This family is related to FMN_red IPR005025 from INTERPRO and Flavodoxin_1 IPR008254 from INTERPRO.; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0050662 coenzyme binding; PDB: 1T5B_B 1DXQ_B 2B3D_A 2Z9D_B 2Z9C_A 2Z98_A 2D5I_A 2Z9B_A 1TIK_A 1V4B_A ....
Probab=35.05 E-value=50 Score=31.60 Aligned_cols=39 Identities=21% Similarity=0.362 Sum_probs=27.3
Q ss_pred ceEEEEEecccCccccccH-HHHhhchHHHHHhCC-CeEEEEEe
Q 007212 85 LNILFVGTEVAPWSKTGGL-GDVLGGLPPALAANG-HRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~-~~~~~~L~~~L~~~G-h~V~vit~ 126 (612)
||||+|... |. ..++. ......+.+++.++| |+|.++=-
T Consensus 1 mkiLvI~as--p~-~~~S~s~~l~~~~~~~~~~~~~~~v~~~dL 41 (199)
T PF02525_consen 1 MKILVINAS--PR-PEGSFSRALADAFLEGLQEAGPHEVEIRDL 41 (199)
T ss_dssp EEEEEEE----SS-TTTSHHHHHHHHHHHHHHHHTTSEEEEEET
T ss_pred CEEEEEEcC--CC-CccCHHHHHHHHHHHHHHHcCCCEEEEEEC
Confidence 899999975 53 12344 455577889999999 99988753
No 283
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=35.01 E-value=4.8e+02 Score=26.47 Aligned_cols=101 Identities=10% Similarity=-0.038 Sum_probs=47.9
Q ss_pred cCHHHHHHHHHhcccCC-eEE-EEEecCCh---hHHHHHHHHHHHCCCceEEEeccChHHHH----HHHHhccEEEEcCC
Q 007212 416 KGSDILAAAIPHFIKEN-VQI-IVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNIPLAH----MIIAGADFILIPSR 486 (612)
Q Consensus 416 Kg~d~li~A~~~l~~~~-~~l-vivG~g~~---~~~~~l~~l~~~~~~~v~~~~~~~~~~~~----~i~~~aDv~v~pS~ 486 (612)
--+..-++.+.++. |+ -++ ++..+... ...+.+++.+.+++-++....--+.+++. .+-...|+++++..
T Consensus 115 ~~~~~~l~l~~~l~-P~~k~igvl~~~~~~~~~~~~~~~~~~a~~~g~~l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~ 193 (294)
T PF04392_consen 115 PPIEKQLELIKKLF-PDAKRIGVLYDPSEPNSVAQIEQLRKAAKKLGIELVEIPVPSSEDLEQALEALAEKVDALYLLPD 193 (294)
T ss_dssp --HHHHHHHHHHHS-TT--EEEEEEETT-HHHHHHHHHHHHHHHHTT-EEEEEEESSGGGHHHHHHHHCTT-SEEEE-S-
T ss_pred cCHHHHHHHHHHhC-CCCCEEEEEecCCCccHHHHHHHHHHHHHHcCCEEEEEecCcHhHHHHHHHHhhccCCEEEEECC
Confidence 34445555555542 22 234 34444332 34556666666666444433322333322 34457788877764
Q ss_pred C---CCCcHHHHHHHHcCCceEEcCCCCcccceecCcc
Q 007212 487 F---EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT 521 (612)
Q Consensus 487 ~---E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~ 521 (612)
. ..+...+..+..+++|++++. ...+.+|.-
T Consensus 194 ~~~~~~~~~i~~~~~~~~iPv~~~~----~~~v~~Gal 227 (294)
T PF04392_consen 194 NLVDSNFEAILQLANEAKIPVFGSS----DFYVKAGAL 227 (294)
T ss_dssp HHHHHTHHHHHHHCCCTT--EEESS----HHHHCTT-S
T ss_pred cchHhHHHHHHHHHHhcCCCEEECC----HHHhcCCcE
Confidence 2 344445666778999999876 344555543
No 284
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=34.92 E-value=12 Score=41.68 Aligned_cols=28 Identities=25% Similarity=0.236 Sum_probs=21.8
Q ss_pred ccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 101 GGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 101 GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
+.--..+..++++|+++||+|+++++..
T Consensus 10 ~SH~~~~~~l~~~L~~rGH~VTvl~~~~ 37 (500)
T PF00201_consen 10 YSHFIFMRPLAEELAERGHNVTVLTPSP 37 (500)
T ss_dssp --SHHHHHHHHHHHHHH-TTSEEEHHHH
T ss_pred cCHHHHHHHHHHHHHhcCCceEEEEeec
Confidence 3455678899999999999999999863
No 285
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=34.85 E-value=52 Score=32.01 Aligned_cols=36 Identities=28% Similarity=0.368 Sum_probs=25.1
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++++|++.+. +||+| ..+++.|.++|++|.+++.+
T Consensus 3 ~~~~~vlItG~-------sg~iG---~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 3 LEGKVALVTGA-------SRGIG---RAIAERLAAQGANVVINYAS 38 (248)
T ss_pred CCCCEEEEECC-------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34456655543 46666 67888899999999877754
No 286
>PRK07577 short chain dehydrogenase; Provisional
Probab=34.70 E-value=53 Score=31.82 Aligned_cols=35 Identities=37% Similarity=0.519 Sum_probs=24.7
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+.++|++++. +||+| ..+++.|+++|++|.++...
T Consensus 2 ~~k~vlItG~-------s~~iG---~~ia~~l~~~G~~v~~~~r~ 36 (234)
T PRK07577 2 SSRTVLVTGA-------TKGIG---LALSLRLANLGHQVIGIARS 36 (234)
T ss_pred CCCEEEEECC-------CCcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3456665543 46666 46788899999999887654
No 287
>PRK06179 short chain dehydrogenase; Provisional
Probab=34.32 E-value=55 Score=32.67 Aligned_cols=25 Identities=28% Similarity=0.453 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++|++|.+++.+
T Consensus 13 sg~iG---~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 13 SSGIG---RATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46776 57888999999999877654
No 288
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=34.26 E-value=48 Score=32.82 Aligned_cols=25 Identities=32% Similarity=0.537 Sum_probs=20.2
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|++| ..|+++|.++||+|++++..
T Consensus 25 SG~iG---~aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 25 TGQLG---KIIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred chHHH---HHHHHHHHhCCCEEEEEECc
Confidence 56666 67889999999999998743
No 289
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative. This model represents a family of proteins found immediately downstream of ribonucleotide reductase genes in Xyella fastidiosa and some Gram-positive bacteria. It appears to be a highly divergent flavodoxin of the short chain type, more like the flavodoxins of the sulfate-reducing genus Desulfovibrio than like the NifF flavodoxins associated with nitrogen fixation.
Probab=33.94 E-value=59 Score=29.22 Aligned_cols=34 Identities=26% Similarity=0.283 Sum_probs=28.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMT 123 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~v 123 (612)
|||+++-. +.+|-...+...++..|...|++|.+
T Consensus 1 M~i~IiY~-----S~tGnTe~iA~~ia~~l~~~g~~v~~ 34 (140)
T TIGR01754 1 MRILLAYL-----SLSGNTEEVAFMIQDYLQKDGHEVDI 34 (140)
T ss_pred CeEEEEEE-----CCCChHHHHHHHHHHHHhhCCeeEEe
Confidence 78888764 34788999999999999999999873
No 290
>COG1192 Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=33.89 E-value=51 Score=32.93 Aligned_cols=37 Identities=32% Similarity=0.554 Sum_probs=26.8
Q ss_pred ceEEEEEecccCccccccHHH--HhhchHHHHH-hCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGD--VLGGLPPALA-ANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~--~~~~L~~~L~-~~Gh~V~vit~~ 127 (612)
|+|+-|... .||+|. ....|+.+|+ ..||+|.++=..
T Consensus 2 ~~iI~v~n~------KGGvGKTT~a~nLa~~La~~~~~kVLliDlD 41 (259)
T COG1192 2 MKIIAVANQ------KGGVGKTTTAVNLAAALAKRGGKKVLLIDLD 41 (259)
T ss_pred CEEEEEEec------CCCccHHHHHHHHHHHHHHhcCCcEEEEeCC
Confidence 677777654 566654 5567999999 566999988544
No 291
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=33.74 E-value=3.4e+02 Score=26.31 Aligned_cols=89 Identities=11% Similarity=0.076 Sum_probs=52.1
Q ss_pred CHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhccEEEEcCCCCC-----
Q 007212 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRFEP----- 489 (612)
Q Consensus 417 g~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~i~~~aDv~v~pS~~E~----- 489 (612)
..+..++.++.+.+..++.+=+--..+...+.++++..++++-+.+.+.. +.+++. .+-++|+++|.|...+.
T Consensus 14 ~~~~a~~ia~al~~gGi~~iEit~~tp~a~~~I~~l~~~~~~~~vGAGTVl~~e~a~~ai~aGA~FivSP~~~~~vi~~a 93 (201)
T PRK06015 14 DVEHAVPLARALAAGGLPAIEITLRTPAALDAIRAVAAEVEEAIVGAGTILNAKQFEDAAKAGSRFIVSPGTTQELLAAA 93 (201)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccHHHHHHHHHHHCCCCEEeeEeCcCHHHHHHHHHcCCCEEECCCCCHHHHHHH
Confidence 55666666666665443333222222335567777777777655666665 444443 46678888888875321
Q ss_pred ------------CcHHHHHHHHcCCceE
Q 007212 490 ------------CGLIQLHAMRYGTVPI 505 (612)
Q Consensus 490 ------------~gl~~lEAma~G~PvI 505 (612)
-+.-+++|+.+|.-+|
T Consensus 94 ~~~~i~~iPG~~TptEi~~A~~~Ga~~v 121 (201)
T PRK06015 94 NDSDVPLLPGAATPSEVMALREEGYTVL 121 (201)
T ss_pred HHcCCCEeCCCCCHHHHHHHHHCCCCEE
Confidence 1334677777777665
No 292
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=33.69 E-value=49 Score=34.67 Aligned_cols=34 Identities=29% Similarity=0.264 Sum_probs=25.2
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
++|+|++.+. +|++| ..+++.|.++||+|+++..
T Consensus 3 ~~k~ilItGa-------tG~IG---~~l~~~L~~~G~~V~~~~r 36 (349)
T TIGR02622 3 QGKKVLVTGH-------TGFKG---SWLSLWLLELGAEVYGYSL 36 (349)
T ss_pred CCCEEEEECC-------CChhH---HHHHHHHHHCCCEEEEEeC
Confidence 4577766654 46666 6788999999999987763
No 293
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=33.10 E-value=61 Score=31.79 Aligned_cols=35 Identities=34% Similarity=0.525 Sum_probs=27.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..+|++++.. .||+| +.|++++++.|++|...+.+
T Consensus 7 ~k~VlItgcs------~GGIG---~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 7 PKKVLITGCS------SGGIG---YALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCeEEEeecC------Ccchh---HHHHHHHHhCCeEEEEEccc
Confidence 4567777643 79998 68999999999999777654
No 294
>PLN00198 anthocyanidin reductase; Provisional
Probab=33.00 E-value=53 Score=34.20 Aligned_cols=37 Identities=24% Similarity=0.087 Sum_probs=25.0
Q ss_pred cCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+++|+|++.+. .|.+| ..|+++|.++||+|.++...
T Consensus 6 ~~~~~~vlItG~-------~GfIG---~~l~~~L~~~g~~V~~~~r~ 42 (338)
T PLN00198 6 PTGKKTACVIGG-------TGFLA---SLLIKLLLQKGYAVNTTVRD 42 (338)
T ss_pred CCCCCeEEEECC-------chHHH---HHHHHHHHHCCCEEEEEECC
Confidence 345677665443 24444 66899999999999777643
No 295
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=32.90 E-value=49 Score=29.38 Aligned_cols=36 Identities=19% Similarity=0.061 Sum_probs=24.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++.... .++ ...+.++.+.|.+.|++|.++...
T Consensus 1 k~i~l~vtG------s~~-~~~~~~~l~~L~~~g~~v~vv~S~ 36 (129)
T PF02441_consen 1 KRILLGVTG------SIA-AYKAPDLLRRLKRAGWEVRVVLSP 36 (129)
T ss_dssp -EEEEEE-S------SGG-GGGHHHHHHHHHTTTSEEEEEESH
T ss_pred CEEEEEEEC------HHH-HHHHHHHHHHHhhCCCEEEEEECC
Confidence 677777643 122 223678999999999999998765
No 296
>PF02635 DrsE: DsrE/DsrF-like family; InterPro: IPR003787 Four small, soluble proteins (DsrE, DsrF, DsrH and DsrC) are encoded in the dsr gene region of the phototrophic sulphur bacterium Chromatium vinosum D. The dsrAB genes encoding dissimilatory sulphite reductase are part of the gene cluster, dsrABEFHCMK. The remaining proteins that are encoded are a transmembrane protein (DsrM) with similarity to haem-b-binding polypeptides and a soluble protein (DsrK) resembling [4Fe-4S]-cluster-containing heterodisulphide reductase from methanogenic archaea. DsrE is a small soluble protein involved in intracellular sulphur reduction [].; PDB: 1L1S_A 2HYB_B 2HY5_B 2PD2_B 3MC3_A 2D1P_H 1JX7_B 2FB6_A.
Probab=32.80 E-value=93 Score=26.51 Aligned_cols=40 Identities=25% Similarity=0.345 Sum_probs=28.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCC---CeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG---HRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G---h~V~vit~~ 127 (612)
|||++|... +|+ ..........++......| ++|.|+...
T Consensus 1 k~v~~i~~~-~p~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~g 43 (122)
T PF02635_consen 1 KKVFFIVTS-GPY--DDERAKIALRLANAAAAMGDYGHDVVVFFHG 43 (122)
T ss_dssp EEEEEEE-S--TT--TBSHHHHHHHHHHHHHHTTHTTSEEEEEE-G
T ss_pred CEEEEEecC-CCC--CCHHHHHHHHHHHHHHHcCCCCCcEEEEEEc
Confidence 788888875 454 2333666777888899999 999999866
No 297
>PRK11104 hemG protoporphyrinogen oxidase; Provisional
Probab=32.77 E-value=53 Score=31.08 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=29.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|||+++-. +.+|-...+...+++.|.. ||+|.++-.
T Consensus 1 MkilIvY~-----S~~G~T~~iA~~Ia~~l~~-g~~v~~~~~ 36 (177)
T PRK11104 1 MKTLILYS-----SRDGQTRKIASYIASELKE-GIQCDVVNL 36 (177)
T ss_pred CcEEEEEE-----CCCChHHHHHHHHHHHhCC-CCeEEEEEh
Confidence 78888875 4578888888999999988 999987753
No 298
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=32.25 E-value=1.2e+02 Score=30.40 Aligned_cols=42 Identities=19% Similarity=0.118 Sum_probs=30.6
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007212 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 513 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 513 (612)
..+++.+|+++.-+.-+...-.+..|+..|+|+|+..+|...
T Consensus 55 ~~ll~~~DvVid~t~p~~~~~~~~~al~~G~~vvigttG~s~ 96 (257)
T PRK00048 55 EAVLADADVLIDFTTPEATLENLEFALEHGKPLVIGTTGFTE 96 (257)
T ss_pred HHhccCCCEEEECCCHHHHHHHHHHHHHcCCCEEEECCCCCH
Confidence 345668999997775555555678899999999987665443
No 299
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=32.23 E-value=45 Score=36.55 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=25.6
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+.|||++.+ |.|-+-..|++.|.++||+|.++..
T Consensus 119 ~~mkILVTG----------atGFIGs~Lv~~Ll~~G~~V~~ldr 152 (436)
T PLN02166 119 KRLRIVVTG----------GAGFVGSHLVDKLIGRGDEVIVIDN 152 (436)
T ss_pred CCCEEEEEC----------CccHHHHHHHHHHHHCCCEEEEEeC
Confidence 469987755 4444446799999999999988763
No 300
>PRK13931 stationary phase survival protein SurE; Provisional
Probab=32.20 E-value=54 Score=33.21 Aligned_cols=39 Identities=26% Similarity=0.357 Sum_probs=26.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC---CCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN---GHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~---Gh~V~vit~~~~~ 130 (612)
||||+.+..-.- .-|+ ..|.++|.+. |++|+|++|..++
T Consensus 1 M~ILlTNDDGI~---a~Gl----~aL~~~l~~~~~~~~~V~VVAP~~eq 42 (261)
T PRK13931 1 MRILITNDDGIN---APGL----EVLEQIATELAGPDGEVWTVAPAFEQ 42 (261)
T ss_pred CeEEEEcCCCCC---CHhH----HHHHHHHHHhccCCCeEEEEeCCCCC
Confidence 899999876321 2344 4566666653 4799999998554
No 301
>PRK07023 short chain dehydrogenase; Provisional
Probab=32.19 E-value=58 Score=31.87 Aligned_cols=33 Identities=27% Similarity=0.484 Sum_probs=24.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+|++.+. +||+| ..+++.|+++|++|.+++.+
T Consensus 2 ~~vlItGa-------sggiG---~~ia~~l~~~G~~v~~~~r~ 34 (243)
T PRK07023 2 VRAIVTGH-------SRGLG---AALAEQLLQPGIAVLGVARS 34 (243)
T ss_pred ceEEEecC-------CcchH---HHHHHHHHhCCCEEEEEecC
Confidence 56766654 47777 56788899999999887643
No 302
>PRK06924 short chain dehydrogenase; Provisional
Probab=32.06 E-value=56 Score=32.09 Aligned_cols=25 Identities=28% Similarity=0.551 Sum_probs=19.7
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..++++|+++|++|.+++..
T Consensus 10 sggiG---~~ia~~l~~~g~~V~~~~r~ 34 (251)
T PRK06924 10 SQGLG---EAIANQLLEKGTHVISISRT 34 (251)
T ss_pred CchHH---HHHHHHHHhcCCEEEEEeCC
Confidence 46776 56899999999999877643
No 303
>PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria. They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A.
Probab=32.05 E-value=2.7e+02 Score=28.24 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=63.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 466 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~ 466 (612)
.+++.+++|-. ....+.|.-++ ....+..+.-+..|.. ++++.+|+-.+.+.....+++..++.|+ +..+...
T Consensus 22 Ae~l~~~Yg~~---~I~h~tyPdnf--~~e~EttIskI~~lAdDp~mKaIVv~q~vpGt~~af~kIkekRpD-Il~ia~~ 95 (275)
T PF12683_consen 22 AEELIKKYGDV---MIKHVTYPDNF--MSEQETTISKIVSLADDPDMKAIVVSQAVPGTAEAFRKIKEKRPD-ILLIAGE 95 (275)
T ss_dssp HHHHHHHHHHH---EEEEEE--TTG--GGCHHHHHHHHHGGGG-TTEEEEEEE-SS---HHHHHHHHHH-TT-SEEEESS
T ss_pred HHHHHHHhCcc---eEEEEeCCCcc--cchHHHHHHHHHHhccCCCccEEEEeCCCcchHHHHHHHHhcCCC-eEEEcCC
Confidence 35566666631 12234444443 3447888888888765 8999999998888888888898888886 6666666
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHH-HHHHcCCce
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQL-HAMRYGTVP 504 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~l-EAma~G~Pv 504 (612)
..+....+-..+|+.+.+.. ...|..+. -|-.+|.-.
T Consensus 96 ~~EDp~~i~~~aDi~~~~D~-~~~G~~i~~~Ak~mGAkt 133 (275)
T PF12683_consen 96 PHEDPEVISSAADIVVNPDE-ISRGYTIVWAAKKMGAKT 133 (275)
T ss_dssp --S-HHHHHHHSSEEEE--H-HHHHHHHHHHHHHTT-S-
T ss_pred CcCCHHHHhhccCeEeccch-hhccHHHHHHHHHcCCce
Confidence 66666678899999998653 33444332 233444433
No 304
>PRK06182 short chain dehydrogenase; Validated
Probab=31.67 E-value=62 Score=32.42 Aligned_cols=25 Identities=36% Similarity=0.481 Sum_probs=19.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++||+|.++..+
T Consensus 12 sggiG---~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 12 SSGIG---KATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888899999999887654
No 305
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=31.38 E-value=4.6e+02 Score=24.89 Aligned_cols=110 Identities=9% Similarity=0.068 Sum_probs=63.8
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc-ChHHHHHHHH--hccEEEEcCCCCC----CcHHHHHHHHc---C
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIA--GADFILIPSRFEP----CGLIQLHAMRY---G 501 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~i~~--~aDv~v~pS~~E~----~gl~~lEAma~---G 501 (612)
+++++|+.+.+ .....++.+-...+. +.....+ +.+.....+. ..|++++-....+ .|+.+++.+.. .
T Consensus 3 ~~~Ilivdd~~-~~~~~l~~~L~~~~~-~~~v~~~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~ 80 (216)
T PRK10840 3 NMNVIIADDHP-IVLFGIRKSLEQIEW-VNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPS 80 (216)
T ss_pred ceEEEEECCcH-HHHHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCC
Confidence 35666666544 344445555444332 2222222 3333333333 4799888655433 57777777653 4
Q ss_pred CceEEc-CCCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 502 TVPIVA-STGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 502 ~PvI~s-~~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+|+|+- +... ..+.++.|..||+. .+.+++++.++|..++..
T Consensus 81 ~~iIvls~~~~~~~~~~a~~~Ga~~yl~----------K~~~~~~l~~ai~~v~~g 126 (216)
T PRK10840 81 LSIIVLTMNNNPAILSAVLDLDIEGIVL----------KQGAPTDLPKALAALQKG 126 (216)
T ss_pred CcEEEEEecCCHHHHHHHHHCCCeEEEE----------CCCCHHHHHHHHHHHHCC
Confidence 566543 3322 22345678889976 888999999999988764
No 306
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=31.21 E-value=61 Score=32.19 Aligned_cols=30 Identities=30% Similarity=0.357 Sum_probs=22.5
Q ss_pred ccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 101 GGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 101 GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||.|.+-..++++|.++||+|.+++.+...
T Consensus 7 GatG~~G~~~~~~L~~~~~~v~~~~r~~~~ 36 (275)
T COG0702 7 GATGFVGGAVVRELLARGHEVRAAVRNPEA 36 (275)
T ss_pred ecccchHHHHHHHHHhCCCEEEEEEeCHHH
Confidence 334444467889999999999999988443
No 307
>PLN02712 arogenate dehydrogenase
Probab=30.86 E-value=83 Score=36.53 Aligned_cols=35 Identities=29% Similarity=0.455 Sum_probs=26.5
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+.+|||++|+ .|.+| ..++.+|.+.||+|.++...
T Consensus 50 ~~~~kIgIIG--------~G~mG---~slA~~L~~~G~~V~~~dr~ 84 (667)
T PLN02712 50 TTQLKIAIIG--------FGNYG---QFLAKTLISQGHTVLAHSRS 84 (667)
T ss_pred CCCCEEEEEc--------cCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4579999998 24444 46888899999999887654
No 308
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=30.77 E-value=4.2e+02 Score=25.75 Aligned_cols=70 Identities=17% Similarity=0.199 Sum_probs=41.7
Q ss_pred CHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhccEEEEcCC
Q 007212 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSR 486 (612)
Q Consensus 417 g~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~i~~~aDv~v~pS~ 486 (612)
..+..++.++.+.+..++++=+--..+.-.+.++++..++++-+.+.+.. +.+++. .+-++|+++|.|..
T Consensus 18 ~~e~a~~~~~al~~~Gi~~iEit~~t~~a~~~i~~l~~~~~~~~vGAGTVl~~~~a~~a~~aGA~FivsP~~ 89 (204)
T TIGR01182 18 DVDDALPLAKALIEGGLRVLEVTLRTPVALDAIRLLRKEVPDALIGAGTVLNPEQLRQAVDAGAQFIVSPGL 89 (204)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHcCCCEEECCCC
Confidence 55666666666655444444333333345566777777777655566665 444443 45678888888875
No 309
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=30.67 E-value=2.6e+02 Score=26.22 Aligned_cols=81 Identities=20% Similarity=0.274 Sum_probs=47.8
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChH------------HHHHHHHhccEEEEcC--CCCC---CcHHH
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP------------LAHMIIAGADFILIPS--RFEP---CGLIQ 494 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~------------~~~~i~~~aDv~v~pS--~~E~---~gl~~ 494 (612)
+-.+-|+|-|. .-+.+.++...++-++..+.....+ .+.++++.||++++.. .-|. ++-..
T Consensus 36 g~tvgIiG~G~--IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li~~~~ 113 (178)
T PF02826_consen 36 GKTVGIIGYGR--IGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLINAEF 113 (178)
T ss_dssp TSEEEEESTSH--HHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSBSHHH
T ss_pred CCEEEEEEEcC--CcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceeeeeee
Confidence 45566666665 4444555555555445555544332 2336899999988643 3344 56679
Q ss_pred HHHHHcCCceEEcCCCCccc
Q 007212 495 LHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 495 lEAma~G~PvI~s~~gg~~e 514 (612)
++.|--|.-+|-..-|++.+
T Consensus 114 l~~mk~ga~lvN~aRG~~vd 133 (178)
T PF02826_consen 114 LAKMKPGAVLVNVARGELVD 133 (178)
T ss_dssp HHTSTTTEEEEESSSGGGB-
T ss_pred eeccccceEEEeccchhhhh
Confidence 99999898788777666544
No 310
>COG0716 FldA Flavodoxins [Energy production and conversion]
Probab=30.60 E-value=71 Score=29.20 Aligned_cols=36 Identities=28% Similarity=0.302 Sum_probs=30.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
|||+++... .+|..+.+...++..|...|++|.+..
T Consensus 2 ~ki~Ivy~S-----~tGnTe~vA~~i~~~l~~~~~~~~~~~ 37 (151)
T COG0716 2 MKILIVYGS-----RTGNTEKVAEIIAEELGADGFEVDIDI 37 (151)
T ss_pred CeEEEEEEc-----CCCcHHHHHHHHHHHhccCCceEEEee
Confidence 788888763 389999999999999999999995544
No 311
>PRK07308 flavodoxin; Validated
Probab=30.48 E-value=69 Score=28.97 Aligned_cols=27 Identities=22% Similarity=0.185 Sum_probs=23.6
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+|..+.+...++..|.+.|++|.+.-.
T Consensus 12 tGnTe~iA~~ia~~l~~~g~~~~~~~~ 38 (146)
T PRK07308 12 TGNTEEIADIVADKLRELGHDVDVDEC 38 (146)
T ss_pred CchHHHHHHHHHHHHHhCCCceEEEec
Confidence 799999999999999999999887643
No 312
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=30.43 E-value=59 Score=32.26 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=24.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|++++++. .+|+| ..+++.|+++|++|.++...
T Consensus 1 m~vlItGa-------s~gIG---~aia~~l~~~G~~V~~~~r~ 33 (259)
T PRK08340 1 MNVLVTAS-------SRGIG---FNVARELLKKGARVVISSRN 33 (259)
T ss_pred CeEEEEcC-------CcHHH---HHHHHHHHHcCCEEEEEeCC
Confidence 67777664 46666 57889999999998777644
No 313
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=30.41 E-value=63 Score=31.56 Aligned_cols=35 Identities=29% Similarity=0.455 Sum_probs=24.5
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|+|++.+. .||+| ..+++.|.++|++|.+++.+
T Consensus 5 ~~~~ilItGa-------sg~iG---~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 5 EGRVALVTGA-------ARGIG---RAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCCEEEEcCC-------CCcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3456665543 35665 56888899999999887654
No 314
>PRK02102 ornithine carbamoyltransferase; Validated
Probab=30.40 E-value=5.8e+02 Score=26.82 Aligned_cols=103 Identities=13% Similarity=0.163 Sum_probs=61.5
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCe
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 433 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~ 433 (612)
|.|+.| ....|... -.+--.+++.+|-- +...|.|+|-+.. .=...++.++..+ ++
T Consensus 126 VINa~~-~~~HPtQa----------------LaDl~Ti~e~~g~l---~g~~va~vGd~~~-~v~~Sl~~~~~~~---g~ 181 (331)
T PRK02102 126 VWNGLT-DEWHPTQM----------------LADFMTMKEHFGPL---KGLKLAYVGDGRN-NMANSLMVGGAKL---GM 181 (331)
T ss_pred EEECCC-CCCChHHH----------------HHHHHHHHHHhCCC---CCCEEEEECCCcc-cHHHHHHHHHHHc---CC
Confidence 557777 46777532 12233455666632 2368999998742 3566777777776 78
Q ss_pred EEEEEecCC----hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcC
Q 007212 434 QIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 485 (612)
Q Consensus 434 ~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS 485 (612)
.+.+++... +++.+..++++...+.++... +.+.+.+..||++....
T Consensus 182 ~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~-----~d~~ea~~~aDvvyt~~ 232 (331)
T PRK02102 182 DVRICAPKELWPEEELVALAREIAKETGAKITIT-----EDPEEAVKGADVIYTDV 232 (331)
T ss_pred EEEEECCcccccCHHHHHHHHHHHHHcCCeEEEE-----cCHHHHhCCCCEEEEcC
Confidence 999999743 233344445555445333221 12335689999988753
No 315
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=30.37 E-value=66 Score=33.71 Aligned_cols=76 Identities=24% Similarity=0.427 Sum_probs=48.2
Q ss_pred CceEEEEEecccCccccccHHH--HhhchHHHHHhCCCeEEEEEecC-CccccccCccEEEEEEeCCeeeEEEEEEeeec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIAPRY-DQYKDAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~--~~~~L~~~L~~~Gh~V~vit~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
+|+|+|++. .||+|. ....++-.|++.|.+|.+++... +...+.++. .++.....+. +
T Consensus 1 ~~riv~f~G-------KGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhsL~d~f~~------elg~~~~~I~------~ 61 (322)
T COG0003 1 MTRIVFFTG-------KGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHSLGDVFDL------ELGHDPRKVG------P 61 (322)
T ss_pred CcEEEEEec-------CCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCchHhhhcc------ccCCchhhcC------C
Confidence 378888875 588888 67778899999998898887542 344444332 1222111111 5
Q ss_pred CceEEEEeCccccccccC
Q 007212 161 GVDRVFVDHPWFLAKVWG 178 (612)
Q Consensus 161 gv~~~~v~~~~~~~~~~g 178 (612)
++...-+|....+++-|+
T Consensus 62 nL~a~eiD~~~~l~ey~~ 79 (322)
T COG0003 62 NLDALELDPEKALEEYWD 79 (322)
T ss_pred CCceeeecHHHHHHHHHH
Confidence 677777777766666564
No 316
>PRK05884 short chain dehydrogenase; Provisional
Probab=30.31 E-value=67 Score=31.23 Aligned_cols=33 Identities=24% Similarity=0.553 Sum_probs=24.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||+++.+. .||+| ..+++.|+++|++|.++..+
T Consensus 1 m~vlItGa-------s~giG---~~ia~~l~~~g~~v~~~~r~ 33 (223)
T PRK05884 1 VEVLVTGG-------DTDLG---RTIAEGFRNDGHKVTLVGAR 33 (223)
T ss_pred CeEEEEeC-------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57666554 36666 56888899999999887654
No 317
>PRK08883 ribulose-phosphate 3-epimerase; Provisional
Probab=30.18 E-value=4.1e+02 Score=26.08 Aligned_cols=124 Identities=18% Similarity=0.115 Sum_probs=65.4
Q ss_pred cCHHHHHHHHHhcccCCeEEEEEec---CC-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCCCCCc
Q 007212 416 KGSDILAAAIPHFIKENVQIIVLGT---GK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCG 491 (612)
Q Consensus 416 Kg~d~li~A~~~l~~~~~~lvivG~---g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~g 491 (612)
++++..++.+.+. .+.++.+=- .. ....+.+++...+.+ +..-+.-+.+.+..++...|.+++-|..-+||
T Consensus 68 ~~p~~~i~~~~~~---gad~i~~H~Ea~~~~~~~l~~ik~~g~k~G--lalnP~Tp~~~i~~~l~~~D~vlvMtV~PGfg 142 (220)
T PRK08883 68 KPVDRIIPDFAKA---GASMITFHVEASEHVDRTLQLIKEHGCQAG--VVLNPATPLHHLEYIMDKVDLILLMSVNPGFG 142 (220)
T ss_pred CCHHHHHHHHHHh---CCCEEEEcccCcccHHHHHHHHHHcCCcEE--EEeCCCCCHHHHHHHHHhCCeEEEEEecCCCC
Confidence 3577777777775 222222221 11 122233333332222 33334446677778999999988877654443
Q ss_pred H---------HHHHH--HHc----CCceEEcCCCCcc-----cceecCcceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 492 L---------IQLHA--MRY----GTVPIVASTGGLV-----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 492 l---------~~lEA--ma~----G~PvI~s~~gg~~-----e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
. .+-+. +.- .+|+.+ .||+. ++++.|.+++.+|+. ++...|+.+.++.+++.+
T Consensus 143 Gq~fi~~~lekI~~l~~~~~~~~~~~~I~v--dGGI~~eni~~l~~aGAd~vVvGSa-----If~~~d~~~~i~~l~~~~ 215 (220)
T PRK08883 143 GQSFIPHTLDKLRAVRKMIDESGRDIRLEI--DGGVKVDNIREIAEAGADMFVAGSA-----IFGQPDYKAVIDEMRAEL 215 (220)
T ss_pred CceecHhHHHHHHHHHHHHHhcCCCeeEEE--ECCCCHHHHHHHHHcCCCEEEEeHH-----HhCCCCHHHHHHHHHHHH
Confidence 3 12221 211 255544 44443 355668889988854 234556666666665544
No 318
>PRK06849 hypothetical protein; Provisional
Probab=30.07 E-value=62 Score=34.70 Aligned_cols=36 Identities=19% Similarity=0.295 Sum_probs=28.0
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|+||+++... | ....++++|.+.||+|+++...
T Consensus 2 ~~~~~VLI~G~~~-~---------~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 2 NTKKTVLITGARA-P---------AALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCCCEEEEeCCCc-H---------HHHHHHHHHHHCCCEEEEEeCC
Confidence 3579999987542 1 3568999999999999999765
No 319
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=29.77 E-value=68 Score=32.25 Aligned_cols=37 Identities=24% Similarity=0.307 Sum_probs=26.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+|++.+ - . .-|-.+.+.+|+.+|+++|++|.++=..
T Consensus 1 ~~i~v~g-K--G---GvGKTT~a~nLA~~la~~G~rvlliD~D 37 (267)
T cd02032 1 MVLAVYG-K--G---GIGKSTTSSNLSVALAKRGKKVLQIGCD 37 (267)
T ss_pred CEEEEec-C--C---CCCHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 6677664 1 1 2345566788999999999999888543
No 320
>PRK07236 hypothetical protein; Provisional
Probab=29.51 E-value=48 Score=35.36 Aligned_cols=34 Identities=24% Similarity=0.245 Sum_probs=26.5
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|+.|+|++|+.- .+|+ .+|..|++.|++|+|+=.
T Consensus 4 ~~~~~ViIVGaG------~aGl-----~~A~~L~~~G~~v~v~E~ 37 (386)
T PRK07236 4 MSGPRAVVIGGS------LGGL-----FAALLLRRAGWDVDVFER 37 (386)
T ss_pred CCCCeEEEECCC------HHHH-----HHHHHHHhCCCCEEEEec
Confidence 667999999853 2444 578889999999999864
No 321
>TIGR03012 sulf_tusD_dsrE sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=29.50 E-value=90 Score=27.78 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=27.8
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeE-EEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V-~vit~~ 127 (612)
|++++... +|+ .+-.+.-...++.++.+.||+| .|+--.
T Consensus 1 ~~~iv~~~-~P~--~~~~~~~al~~A~aa~~~gh~v~~vFf~~ 40 (127)
T TIGR03012 1 KYTLLVTG-PPY--GTQAASSAYQFAQALLAKGHEIVRVFFYQ 40 (127)
T ss_pred CEEEEEeC-CCC--CcHHHHHHHHHHHHHHHCCCcEEEEEEeh
Confidence 45666655 676 4445667788999999999995 666544
No 322
>PRK06101 short chain dehydrogenase; Provisional
Probab=29.43 E-value=69 Score=31.39 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=23.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+.++|+.- +||+| ..+++.|+++|++|.++..+
T Consensus 1 ~~~vlItGa------s~giG---~~la~~L~~~G~~V~~~~r~ 34 (240)
T PRK06101 1 MTAVLITGA------TSGIG---KQLALDYAKQGWQVIACGRN 34 (240)
T ss_pred CcEEEEEcC------CcHHH---HHHHHHHHhCCCEEEEEECC
Confidence 455555532 56766 67888899999998877643
No 323
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=29.26 E-value=53 Score=33.26 Aligned_cols=27 Identities=26% Similarity=0.577 Sum_probs=21.5
Q ss_pred cccHH--HHhhchHHHHHhCCCeEEEEEe
Q 007212 100 TGGLG--DVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~--~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.||+| +.+.+|+-+|+++|++|.++=.
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVllvD~ 37 (273)
T PRK13232 9 KGGIGKSTTTQNLTAALSTMGNKILLVGC 37 (273)
T ss_pred CCCCcHHHHHHHHHHHHHhhCCCeEEEec
Confidence 45555 5568899999999999999843
No 324
>PLN03007 UDP-glucosyltransferase family protein
Probab=29.25 E-value=72 Score=35.43 Aligned_cols=39 Identities=15% Similarity=0.130 Sum_probs=30.8
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++++|+++.. | .-|--.=+.+|++.|+.+|++|+++++.
T Consensus 4 ~~~hVvlvp~---p---a~GHi~P~L~LAk~L~~rG~~VT~vtt~ 42 (482)
T PLN03007 4 EKLHILFFPF---M---AHGHMIPTLDMAKLFSSRGAKSTILTTP 42 (482)
T ss_pred CCcEEEEECC---C---ccccHHHHHHHHHHHHhCCCEEEEEECC
Confidence 3568888873 4 3455567789999999999999999976
No 325
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=29.19 E-value=68 Score=33.49 Aligned_cols=33 Identities=30% Similarity=0.466 Sum_probs=25.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |..| ..++..|++.||+|+++...
T Consensus 4 ~m~I~iIG~--------G~mG---~~ia~~L~~~G~~V~~~~r~ 36 (328)
T PRK14618 4 GMRVAVLGA--------GAWG---TALAVLAASKGVPVRLWARR 36 (328)
T ss_pred CCeEEEECc--------CHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 589999973 4444 46777899999999998765
No 326
>PRK08703 short chain dehydrogenase; Provisional
Probab=29.14 E-value=79 Score=30.81 Aligned_cols=25 Identities=36% Similarity=0.530 Sum_probs=19.7
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 15 sggiG---~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 15 SQGLG---EQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCcHH---HHHHHHHHHcCCEEEEEeCC
Confidence 57777 45788899999998887654
No 327
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=29.05 E-value=86 Score=33.71 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=26.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.++|||++++. +|++| ..++++|.++||+|.+++..
T Consensus 58 ~~~~kVLVtGa-------tG~IG---~~l~~~Ll~~G~~V~~l~R~ 93 (390)
T PLN02657 58 PKDVTVLVVGA-------TGYIG---KFVVRELVRRGYNVVAVARE 93 (390)
T ss_pred CCCCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEEec
Confidence 34688877654 35555 56788899999999888754
No 328
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=28.97 E-value=72 Score=31.18 Aligned_cols=35 Identities=29% Similarity=0.541 Sum_probs=25.4
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++++|++++. +||+| ..+++.|.++|++|.++...
T Consensus 4 ~~~~vlItGa-------sg~iG---~~l~~~l~~~G~~V~~~~r~ 38 (251)
T PRK07231 4 EGKVAIVTGA-------SSGIG---EGIARRFAAEGARVVVTDRN 38 (251)
T ss_pred CCcEEEEECC-------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3456666654 46666 57888899999998777654
No 329
>PRK07806 short chain dehydrogenase; Provisional
Probab=28.95 E-value=75 Score=31.14 Aligned_cols=33 Identities=27% Similarity=0.437 Sum_probs=23.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+++|++++. .||+| ..+++.|.++||+|.++..
T Consensus 6 ~k~vlItGa-------sggiG---~~l~~~l~~~G~~V~~~~r 38 (248)
T PRK07806 6 GKTALVTGS-------SRGIG---ADTAKILAGAGAHVVVNYR 38 (248)
T ss_pred CcEEEEECC-------CCcHH---HHHHHHHHHCCCEEEEEeC
Confidence 455665553 57777 5578889999999977654
No 330
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=28.82 E-value=63 Score=33.68 Aligned_cols=32 Identities=22% Similarity=0.365 Sum_probs=24.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++. |.+| ..++..|++.||+|+++..+
T Consensus 1 MkI~IiGa--------Ga~G---~ala~~L~~~g~~V~l~~r~ 32 (326)
T PRK14620 1 MKISILGA--------GSFG---TAIAIALSSKKISVNLWGRN 32 (326)
T ss_pred CEEEEECc--------CHHH---HHHHHHHHHCCCeEEEEecC
Confidence 78888873 4444 45777799999999988764
No 331
>COG0512 PabA Anthranilate/para-aminobenzoate synthases component II [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=28.76 E-value=64 Score=30.93 Aligned_cols=34 Identities=18% Similarity=0.143 Sum_probs=28.1
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|+||+|..+ -.++++|++.|...|++|+|+--.
T Consensus 1 ~~~IL~IDNy----------DSFtyNLv~yl~~lg~~v~V~rnd 34 (191)
T COG0512 1 MMMILLIDNY----------DSFTYNLVQYLRELGAEVTVVRND 34 (191)
T ss_pred CceEEEEECc----------cchHHHHHHHHHHcCCceEEEECC
Confidence 3789999875 228899999999999999988654
No 332
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=28.38 E-value=75 Score=31.95 Aligned_cols=34 Identities=32% Similarity=0.531 Sum_probs=25.6
Q ss_pred ceEEEEEecccCccccccHH--HHhhchHHHHHhCCCeEEEEEe
Q 007212 85 LNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~--~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|+|++.. .||+| +.+.+|+.+|+++|++|.+|=.
T Consensus 1 ~~i~~~g--------KGGVGKTT~~~nLA~~La~~g~rVLliD~ 36 (268)
T TIGR01281 1 MILAVYG--------KGGIGKSTTSSNLSVAFAKLGKRVLQIGC 36 (268)
T ss_pred CEEEEEc--------CCcCcHHHHHHHHHHHHHhCCCeEEEEec
Confidence 6666662 46555 5568899999999999988843
No 333
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=28.33 E-value=1.5e+02 Score=30.11 Aligned_cols=37 Identities=19% Similarity=0.050 Sum_probs=29.2
Q ss_pred HHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC
Q 007212 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 475 ~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg 511 (612)
...+|+++.-|.-+..--.+..|+.+|+|+|+..+|.
T Consensus 66 ~~~~DvVIdfT~p~~~~~~~~~al~~g~~vVigttg~ 102 (266)
T TIGR00036 66 ETDPDVLIDFTTPEGVLNHLKFALEHGVRLVVGTTGF 102 (266)
T ss_pred cCCCCEEEECCChHHHHHHHHHHHHCCCCEEEECCCC
Confidence 3568999988865655667889999999999877754
No 334
>PRK08177 short chain dehydrogenase; Provisional
Probab=28.24 E-value=74 Score=30.79 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=24.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.. .||+| ..+++.|+++|++|.+++..
T Consensus 1 ~k~vlItG~------sg~iG---~~la~~l~~~G~~V~~~~r~ 34 (225)
T PRK08177 1 KRTALIIGA------SRGLG---LGLVDRLLERGWQVTATVRG 34 (225)
T ss_pred CCEEEEeCC------CchHH---HHHHHHHHhCCCEEEEEeCC
Confidence 555555532 46666 45788899999999888755
No 335
>PRK11891 aspartate carbamoyltransferase; Provisional
Probab=28.22 E-value=4.5e+02 Score=28.73 Aligned_cols=135 Identities=14% Similarity=0.099 Sum_probs=75.3
Q ss_pred HhhCCEEEecCH--HHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 315 ILESDMVLTVSP--HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 315 l~~ad~vi~vS~--~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
-..+|.++.=.. ...+++.+. ..+- |.|+.|-+...|... -.+--.++
T Consensus 180 s~y~D~IviR~~~~~~~~e~A~~-------------s~vP-VINAgdg~~~HPtQa----------------LaDl~Ti~ 229 (429)
T PRK11891 180 SGYVDALVIRHPEQGSVAEFARA-------------TNLP-VINGGDGPGEHPSQA----------------LLDLYTIQ 229 (429)
T ss_pred HHhCCEEEEeCCchhHHHHHHHh-------------CCCC-EEECCCCCCCCcHHH----------------HHHHHHHH
Confidence 345888776543 344454431 1222 568887667777632 11233455
Q ss_pred HHhCCCCC-CCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007212 393 AEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 393 ~~~gl~~~-~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 471 (612)
+.+|-..+ -+...|.|+|-+...+=...++.++..+ .++++++++...-...+.+.+...+.+..+... +.+
T Consensus 230 E~~g~~g~~l~G~kIa~vGD~~~~rv~~Sl~~~la~~--~G~~v~l~~P~~~~~~~~~~~~~~~~G~~v~~~-----~d~ 302 (429)
T PRK11891 230 REFSRLGKIVDGAHIALVGDLKYGRTVHSLVKLLALY--RGLKFTLVSPPTLEMPAYIVEQISRNGHVIEQT-----DDL 302 (429)
T ss_pred HHhCccCCCcCCCEEEEECcCCCChHHHHHHHHHHHh--cCCEEEEECCCccccCHHHHHHHHhcCCeEEEE-----cCH
Confidence 66642100 1236899999875566677778877654 378889988744112223333333344333322 223
Q ss_pred HHHHHhccEEEEcCC
Q 007212 472 HMIIAGADFILIPSR 486 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~ 486 (612)
.+.+..||++...+.
T Consensus 303 ~eav~~ADVVYt~~~ 317 (429)
T PRK11891 303 AAGLRGADVVYATRI 317 (429)
T ss_pred HHHhCCCCEEEEcCc
Confidence 357999999887664
No 336
>PRK00124 hypothetical protein; Validated
Probab=28.10 E-value=1.4e+02 Score=27.53 Aligned_cols=84 Identities=15% Similarity=0.069 Sum_probs=57.7
Q ss_pred EEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCccc
Q 007212 435 IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 435 lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.|=++.=+ ..+.+.+++.+++-.+.++..++.......-......++++-++.-=..++|-..-|=-||+.|.|-...
T Consensus 3 I~VDADACP-Vk~~i~r~a~r~~i~v~~Vas~n~~~~~~~~~~v~~v~V~~g~D~AD~~Iv~~~~~gDiVIT~Di~LAa~ 81 (151)
T PRK00124 3 IYVDADACP-VKDIIIRVAERHGIPVTLVASFNHFLRVPYSPFIRTVYVDAGFDAADNEIVQLAEKGDIVITQDYGLAAL 81 (151)
T ss_pred EEEECCCCc-HHHHHHHHHHHHCCeEEEEEeCCcccCCCCCCceEEEEeCCCCChHHHHHHHhCCCCCEEEeCCHHHHHH
Confidence 444444333 6777888888887667777766554321112234567788888888888999999998888888876666
Q ss_pred ceecC
Q 007212 515 TVEEG 519 (612)
Q Consensus 515 ~v~~g 519 (612)
.+..|
T Consensus 82 ~l~Kg 86 (151)
T PRK00124 82 ALEKG 86 (151)
T ss_pred HHHCC
Confidence 66654
No 337
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=28.08 E-value=66 Score=30.70 Aligned_cols=32 Identities=31% Similarity=0.486 Sum_probs=21.0
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++..| . | .-+|..|++.||+|..+=..
T Consensus 1 M~I~ViGlGy-----v-G-----l~~A~~lA~~G~~V~g~D~~ 32 (185)
T PF03721_consen 1 MKIAVIGLGY-----V-G-----LPLAAALAEKGHQVIGVDID 32 (185)
T ss_dssp -EEEEE--ST-----T-H-----HHHHHHHHHTTSEEEEE-S-
T ss_pred CEEEEECCCc-----c-h-----HHHHHHHHhCCCEEEEEeCC
Confidence 8999988653 2 2 35788899999999888654
No 338
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=27.92 E-value=89 Score=31.00 Aligned_cols=38 Identities=18% Similarity=0.134 Sum_probs=31.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+|+.|... + ..|-.+.+..|++.|.++|++|.++-+.
T Consensus 1 m~vi~ivG~--~---gsGKTtl~~~l~~~L~~~G~~V~viK~~ 38 (229)
T PRK14494 1 MRAIGVIGF--K---DSGKTTLIEKILKNLKERGYRVATAKHT 38 (229)
T ss_pred CeEEEEECC--C---CChHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 787777753 2 6788889999999999999999999654
No 339
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=27.90 E-value=66 Score=31.91 Aligned_cols=25 Identities=32% Similarity=0.379 Sum_probs=20.5
Q ss_pred cHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 102 GLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 102 G~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|-.+.+.+|+.+|++.|++|.++=.
T Consensus 14 GKTt~a~~lA~~la~~g~~vlliD~ 38 (261)
T TIGR01968 14 GKTTTTANLGTALARLGKKVVLIDA 38 (261)
T ss_pred cHHHHHHHHHHHHHHcCCeEEEEEC
Confidence 4455788899999999999988843
No 340
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=27.77 E-value=40 Score=33.25 Aligned_cols=26 Identities=31% Similarity=0.468 Sum_probs=21.7
Q ss_pred cHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 102 GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 102 G~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+|.+-..+|+.|.++||+|+++=..
T Consensus 7 G~G~vG~~va~~L~~~g~~Vv~Id~d 32 (225)
T COG0569 7 GAGRVGRSVARELSEEGHNVVLIDRD 32 (225)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEEcC
Confidence 44667788999999999999999755
No 341
>PLN02206 UDP-glucuronate decarboxylase
Probab=27.67 E-value=61 Score=35.58 Aligned_cols=33 Identities=33% Similarity=0.493 Sum_probs=25.1
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
+.|||++.+ |.|.+=..|++.|.++||+|.++.
T Consensus 118 ~~~kILVTG----------atGfIGs~Lv~~Ll~~G~~V~~ld 150 (442)
T PLN02206 118 KGLRVVVTG----------GAGFVGSHLVDRLMARGDSVIVVD 150 (442)
T ss_pred CCCEEEEEC----------cccHHHHHHHHHHHHCcCEEEEEe
Confidence 569987654 444445678999999999998875
No 342
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=27.42 E-value=89 Score=31.28 Aligned_cols=26 Identities=31% Similarity=0.405 Sum_probs=21.2
Q ss_pred cHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 102 GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 102 G~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|-.+.+.+||.+|+++|++|.+|=..
T Consensus 13 GKTT~~~nLA~~La~~G~kVlliD~D 38 (270)
T cd02040 13 GKSTTTQNLSAALAEMGKKVMIVGCD 38 (270)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEEcC
Confidence 44566788999999999999998543
No 343
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=27.34 E-value=86 Score=30.83 Aligned_cols=39 Identities=18% Similarity=0.206 Sum_probs=27.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+-|... ...-|-.+.+.+|+.+|+++|++|.++=..
T Consensus 1 m~iI~v~s~----KGGvGKTt~a~nla~~la~~g~~VlliD~D 39 (246)
T TIGR03371 1 MKVIAIVGV----KGGVGKTTLTANLASALKLLGEPVLAIDLD 39 (246)
T ss_pred CcEEEEEeC----CCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 665555432 112355567788999999999999988654
No 344
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=27.30 E-value=1.1e+02 Score=28.41 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=27.6
Q ss_pred HHHHhccEEEEcCC----CCCCcH--HHHHHHHcCCceEEcCC
Q 007212 473 MIIAGADFILIPSR----FEPCGL--IQLHAMRYGTVPIVAST 509 (612)
Q Consensus 473 ~i~~~aDv~v~pS~----~E~~gl--~~lEAma~G~PvI~s~~ 509 (612)
.+-..+|++|+--. .|+-|+ .+.+|++.|+||+++-.
T Consensus 89 al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~ 131 (159)
T PF10649_consen 89 ALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVP 131 (159)
T ss_pred HHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEEC
Confidence 45567999888654 245555 58999999999998754
No 345
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=27.28 E-value=68 Score=29.72 Aligned_cols=37 Identities=41% Similarity=0.505 Sum_probs=30.1
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
+++||++|+. +-+.++..++..+++.|.+|++++|..
T Consensus 1 ~gl~i~~vGD---------~~~rv~~Sl~~~~~~~g~~~~~~~P~~ 37 (158)
T PF00185_consen 1 KGLKIAYVGD---------GHNRVAHSLIELLAKFGMEVVLIAPEG 37 (158)
T ss_dssp TTEEEEEESS---------TTSHHHHHHHHHHHHTTSEEEEESSGG
T ss_pred CCCEEEEECC---------CCChHHHHHHHHHHHcCCEEEEECCCc
Confidence 4789999984 124578899999999999999999873
No 346
>PRK06703 flavodoxin; Provisional
Probab=27.27 E-value=96 Score=28.14 Aligned_cols=38 Identities=21% Similarity=0.203 Sum_probs=30.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+++-.. .+|-...+...++..|.+.|++|.++-..
T Consensus 2 mkv~IiY~S-----~tGnT~~iA~~ia~~l~~~g~~v~~~~~~ 39 (151)
T PRK06703 2 AKILIAYAS-----MSGNTEDIADLIKVSLDAFDHEVVLQEMD 39 (151)
T ss_pred CeEEEEEEC-----CCchHHHHHHHHHHHHHhcCCceEEEehh
Confidence 677777643 37999999999999999999999887543
No 347
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=26.92 E-value=8.2e+02 Score=26.33 Aligned_cols=72 Identities=24% Similarity=0.368 Sum_probs=46.0
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc-cceec-CcceEEecccccccccCCCCCHHHHHHH
Q 007212 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~-g~~G~~~~~~~~~~~~v~~~d~~~la~~ 546 (612)
+++..+++++|+.|-.-. =.++=||+.|+|+|+-....=. .+.++ |-.++.. -.++.|.+.+...
T Consensus 277 ~~~~~~l~~~dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~--------~i~~~~~~~l~~~ 343 (385)
T COG2327 277 EELGGILAACDLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAI--------DIDPLDAEILSAV 343 (385)
T ss_pred HHHHHHhccCceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccc--------cCCCCchHHHHHH
Confidence 344568999999884432 2466699999999988754322 22222 2223322 2467788888888
Q ss_pred HHHHHHh
Q 007212 547 VRRALAT 553 (612)
Q Consensus 547 i~~ll~~ 553 (612)
+.+.+..
T Consensus 344 ~~e~~~~ 350 (385)
T COG2327 344 VLERLTK 350 (385)
T ss_pred HHHHHhc
Confidence 8887776
No 348
>PRK04155 chaperone protein HchA; Provisional
Probab=26.90 E-value=1.5e+02 Score=30.61 Aligned_cols=46 Identities=13% Similarity=-0.041 Sum_probs=27.5
Q ss_pred CCCceEEEEEecccCcc-cc-----ccHH-HHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWS-KT-----GGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~-~~-----GG~~-~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..+||||+|.+...-+. .. .|.. .=+..-...|.+.|++|+++++.
T Consensus 47 ~~~kkiL~v~t~~~~~~~~~g~~~~tG~~~~E~~~P~~~L~~AG~eVdiAS~~ 99 (287)
T PRK04155 47 RGGKKILMIAADERYLPMDNGKLFSTGNHPVETLLPMYHLHKAGFEFDVATLS 99 (287)
T ss_pred CCCCeEEEEEcCcccccCCCCCcCCCCccHHHHHHHHHHHHHCCCEEEEEecC
Confidence 34579999987643321 11 1221 11122345678899999999986
No 349
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=26.82 E-value=2.3e+02 Score=26.48 Aligned_cols=67 Identities=7% Similarity=0.065 Sum_probs=44.1
Q ss_pred ccCHHHHHHHHHhcccC--CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcC
Q 007212 415 QKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 485 (612)
Q Consensus 415 ~Kg~d~li~A~~~l~~~--~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS 485 (612)
.=++.+.++|+..+..+ |.-+++-|+++ +...++.+.+. +..|..++ ...-....+.++||-|+.-.
T Consensus 88 ~~Dv~laIDame~~~~~~iD~~vLvSgD~D--F~~Lv~~lre~-G~~V~v~g-~~~~ts~~L~~acd~FI~L~ 156 (160)
T TIGR00288 88 DVDVRMAVEAMELIYNPNIDAVALVTRDAD--FLPVINKAKEN-GKETIVIG-AEPGFSTALQNSADIAIILG 156 (160)
T ss_pred cccHHHHHHHHHHhccCCCCEEEEEeccHh--HHHHHHHHHHC-CCEEEEEe-CCCCChHHHHHhcCeEEeCC
Confidence 34688899999888554 44444555555 88888877765 55566555 23333446889999887543
No 350
>PRK09072 short chain dehydrogenase; Provisional
Probab=26.81 E-value=87 Score=31.09 Aligned_cols=25 Identities=40% Similarity=0.735 Sum_probs=19.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.+++.+
T Consensus 14 s~~iG---~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 14 SGGIG---QALAEALAAAGARLLLVGRN 38 (263)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 35666 67888899999999888754
No 351
>PRK12829 short chain dehydrogenase; Provisional
Probab=26.67 E-value=83 Score=31.08 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=25.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
++.++|++++. .||++ ..+++.|.++||+|.++..
T Consensus 9 ~~~~~vlItGa-------~g~iG---~~~a~~L~~~g~~V~~~~r 43 (264)
T PRK12829 9 LDGLRVLVTGG-------ASGIG---RAIAEAFAEAGARVHVCDV 43 (264)
T ss_pred cCCCEEEEeCC-------CCcHH---HHHHHHHHHCCCEEEEEeC
Confidence 34677777764 46766 5678889999999877764
No 352
>PRK06057 short chain dehydrogenase; Provisional
Probab=26.65 E-value=83 Score=31.07 Aligned_cols=36 Identities=25% Similarity=0.251 Sum_probs=25.1
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++++|++++. .||+| ..+++.|+++|++|.++...
T Consensus 5 ~~~~~vlItGa-------sggIG---~~~a~~l~~~G~~v~~~~r~ 40 (255)
T PRK06057 5 LAGRVAVITGG-------GSGIG---LATARRLAAEGATVVVGDID 40 (255)
T ss_pred CCCCEEEEECC-------CchHH---HHHHHHHHHcCCEEEEEeCC
Confidence 34456665553 46776 56788899999999887643
No 353
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=26.62 E-value=5e+02 Score=23.73 Aligned_cols=108 Identities=18% Similarity=0.191 Sum_probs=62.5
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEecc-ChHHHHHHH--HhccEEEEcCCC-CCCcHHHHHHHHcCCceEEcCC
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~~i~--~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+++|+.+.+ .....+.+.-...++ ......+ +.......+ ...|++++-... +.-|..+++.+....|+|+...
T Consensus 3 ~ilivd~~~-~~~~~l~~~L~~~~~-~~~~~~~~~~~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~ 80 (196)
T PRK10360 3 TVALIDDHL-IVRSGFAQLLGLEPD-LQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSV 80 (196)
T ss_pred EEEEECCcH-HHHHHHHHHHccCCC-cEEEEEECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEEC
Confidence 566666543 333444444332222 2222222 233332333 246888886554 4457778888877788765433
Q ss_pred CCcc----cceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 510 GGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 510 gg~~----e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
.... +.+..|..|++. .|.+.+++.++|..++..
T Consensus 81 ~~~~~~~~~~~~~ga~~~i~----------kp~~~~~l~~~i~~~~~~ 118 (196)
T PRK10360 81 HDSPALVEQALNAGARGFLS----------KRCSPDELIAAVHTVATG 118 (196)
T ss_pred CCCHHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHcC
Confidence 2222 334567788876 889999999999988753
No 354
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=26.59 E-value=72 Score=32.99 Aligned_cols=32 Identities=38% Similarity=0.547 Sum_probs=24.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+||+. |.+| ..++..|++.||+|+++...
T Consensus 2 mkI~iiG~--------G~mG---~~~a~~L~~~g~~V~~~~r~ 33 (325)
T PRK00094 2 MKIAVLGA--------GSWG---TALAIVLARNGHDVTLWARD 33 (325)
T ss_pred CEEEEECC--------CHHH---HHHHHHHHhCCCEEEEEECC
Confidence 78999873 5454 46777789999999888754
No 355
>PRK12746 short chain dehydrogenase; Provisional
Probab=26.56 E-value=83 Score=30.93 Aligned_cols=25 Identities=28% Similarity=0.385 Sum_probs=19.1
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|.++|++|.++..+
T Consensus 15 sg~iG---~~la~~l~~~G~~v~i~~~r 39 (254)
T PRK12746 15 SRGIG---RAIAMRLANDGALVAIHYGR 39 (254)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 47776 67888899999999776433
No 356
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=26.49 E-value=70 Score=32.37 Aligned_cols=28 Identities=29% Similarity=0.489 Sum_probs=22.1
Q ss_pred cccHHH--HhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGD--VLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~--~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+|. .+.+|+-+|+++|++|.+|=..
T Consensus 9 KGGVGKTT~~~nLA~~La~~G~rVLlID~D 38 (274)
T PRK13235 9 KGGIGKSTTTQNTVAGLAEMGKKVMVVGCD 38 (274)
T ss_pred CCCccHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 466554 5678999999999999998543
No 357
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=26.47 E-value=1.1e+02 Score=29.43 Aligned_cols=40 Identities=20% Similarity=0.165 Sum_probs=28.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHh-CCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~-~Gh~V~vit~~ 127 (612)
.||++.|+.. ...-|-.....+||.+|++ .|++|.++=..
T Consensus 34 ~~~vi~v~s~----kgG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 34 NNNLIMVTSS----LPGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CCeEEEEECC----CCCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 4676666643 1134667778899999997 69999998654
No 358
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=26.46 E-value=71 Score=34.72 Aligned_cols=35 Identities=14% Similarity=0.032 Sum_probs=25.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+.|||++|+.-+ +=..++..|++.||+|.++-..
T Consensus 1 m~~~kI~VIGlG~-----------~G~~~A~~La~~G~~V~~~D~~ 35 (415)
T PRK11064 1 MSFETISVIGLGY-----------IGLPTAAAFASRQKQVIGVDIN 35 (415)
T ss_pred CCccEEEEECcch-----------hhHHHHHHHHhCCCEEEEEeCC
Confidence 3458999988532 2246888899999999888654
No 359
>PRK07825 short chain dehydrogenase; Provisional
Probab=26.46 E-value=87 Score=31.29 Aligned_cols=35 Identities=31% Similarity=0.305 Sum_probs=24.2
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++++|++.+. +||+| ..+++.|+++|++|.++..+
T Consensus 4 ~~~~ilVtGa-------sggiG---~~la~~l~~~G~~v~~~~r~ 38 (273)
T PRK07825 4 RGKVVAITGG-------ARGIG---LATARALAALGARVAIGDLD 38 (273)
T ss_pred CCCEEEEeCC-------CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 3455555443 47777 67888899999998776543
No 360
>PRK06444 prephenate dehydrogenase; Provisional
Probab=26.39 E-value=78 Score=30.62 Aligned_cols=28 Identities=36% Similarity=0.547 Sum_probs=21.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVM 122 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~ 122 (612)
|||++|+. .|++|.. ++..|.+.||.|.
T Consensus 1 ~~~~iiG~-------~G~mG~~---~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGK-------NGRLGRV---LCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEec-------CCcHHHH---HHHHHHhCCCEEE
Confidence 78999984 4888865 4555888999986
No 361
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=26.23 E-value=5.9e+02 Score=24.44 Aligned_cols=100 Identities=14% Similarity=0.051 Sum_probs=60.3
Q ss_pred cccCHHHHHHHHHhcccCCeEEEEEecCC---hhHHHHHHHHHHHCCCceEEEecc---ChHHHHHHHHhccEEEEcCC-
Q 007212 414 EQKGSDILAAAIPHFIKENVQIIVLGTGK---KPMEKQLEQLEILYPEKARGVAKF---NIPLAHMIIAGADFILIPSR- 486 (612)
Q Consensus 414 ~~Kg~d~li~A~~~l~~~~~~lvivG~g~---~~~~~~l~~l~~~~~~~v~~~~~~---~~~~~~~i~~~aDv~v~pS~- 486 (612)
.....+.+-+.+......+.+++++.+.. ..+.+...+.-.+++-.+..+..+ +.+...+.+..||+++++--
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~ 90 (210)
T cd03129 11 KAHARPILQDFLARAGGAGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGN 90 (210)
T ss_pred ccChHHHHHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCc
Confidence 34445555555555533567788887754 234444444445555444444443 34566678999999998752
Q ss_pred -------CCCC--cHHHHHHHHcCCceEEcCCCCcc
Q 007212 487 -------FEPC--GLIQLHAMRYGTVPIVASTGGLV 513 (612)
Q Consensus 487 -------~E~~--gl~~lEAma~G~PvI~s~~gg~~ 513 (612)
+... --.+.+....|+|++.++.|.+.
T Consensus 91 ~~~~~~~l~~t~~~~~i~~~~~~G~v~~G~SAGA~~ 126 (210)
T cd03129 91 QLRLLSVLRETPLLDAILKRVARGVVIGGTSAGAAV 126 (210)
T ss_pred HHHHHHHHHhCChHHHHHHHHHcCCeEEEcCHHHHH
Confidence 2222 22477888889999988876543
No 362
>PRK07024 short chain dehydrogenase; Provisional
Probab=26.17 E-value=86 Score=31.03 Aligned_cols=25 Identities=28% Similarity=0.470 Sum_probs=19.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++|++|.++..+
T Consensus 11 s~gIG---~~la~~l~~~G~~v~~~~r~ 35 (257)
T PRK07024 11 SSGIG---QALAREYARQGATLGLVARR 35 (257)
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46777 67888899999999887654
No 363
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=26.15 E-value=3.3e+02 Score=23.77 Aligned_cols=15 Identities=27% Similarity=0.496 Sum_probs=11.0
Q ss_pred hccCeEEeeCCccCC
Q 007212 347 RKTGIKGIVNGMDVQ 361 (612)
Q Consensus 347 ~~~~i~vI~ngvd~~ 361 (612)
+.....+++.|.+.+
T Consensus 24 ~~~G~~vi~lG~~vp 38 (122)
T cd02071 24 RDAGFEVIYTGLRQT 38 (122)
T ss_pred HHCCCEEEECCCCCC
Confidence 444788999998853
No 364
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=26.15 E-value=9.2e+02 Score=26.67 Aligned_cols=107 Identities=22% Similarity=0.252 Sum_probs=65.1
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh--ccEEEEcCCC-CCCcHHHHHHHHc---CCceEE-
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMRY---GTVPIV- 506 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~--aDv~v~pS~~-E~~gl~~lEAma~---G~PvI~- 506 (612)
.++++-+. ......+.+.-...+-.+. ..-+...+...+.. .|+++.-.+. +.-|+.+++.+.. ++|||.
T Consensus 6 ~iLvVDDd-~~ir~~l~~~L~~~G~~v~--~a~~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~~ 82 (464)
T COG2204 6 RILVVDDD-PDIRELLEQALELAGYEVV--TAESAEEALEALSESPFDLVLLDIRMPGMDGLELLKEIKSRDPDLPVIVM 82 (464)
T ss_pred CEEEEeCC-HHHHHHHHHHHHHcCCeEE--EeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCCEEEE
Confidence 34555543 3345555555444442233 22244444444444 4666655554 5678888887766 688875
Q ss_pred cCCCCcc---cceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 507 ASTGGLV---DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s~~gg~~---e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|..|.+. +-++.|..-|+. -|-|++.|...|.++++.
T Consensus 83 Tg~g~i~~AV~A~k~GA~Dfl~----------KP~~~~~L~~~v~ral~~ 122 (464)
T COG2204 83 TGHGDIDTAVEALRLGAFDFLE----------KPFDLDRLLAIVERALEL 122 (464)
T ss_pred eCCCCHHHHHHHHhcCcceeee----------CCCCHHHHHHHHHHHHHH
Confidence 4555543 344456666654 899999999999999997
No 365
>PRK13671 hypothetical protein; Provisional
Probab=26.11 E-value=2.4e+02 Score=29.15 Aligned_cols=36 Identities=19% Similarity=0.318 Sum_probs=24.4
Q ss_pred EEEEEccCcc-ccCHHHHHHHHHhcccCC-eEEEEEec
Q 007212 405 VIGFIGRLEE-QKGSDILAAAIPHFIKEN-VQIIVLGT 440 (612)
Q Consensus 405 ~i~~iGrl~~-~Kg~d~li~A~~~l~~~~-~~lvivG~ 440 (612)
+++.|..++| +.|+-.+++.+.+....+ +-++..|+
T Consensus 2 ~~GIIaeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~ 39 (298)
T PRK13671 2 AIGIIAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGK 39 (298)
T ss_pred ceeEEeeeCCccHHHHHHHHHHHHhcCCCEEEEEECcC
Confidence 4567777776 789999999988865544 33444444
No 366
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=26.10 E-value=76 Score=32.48 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=23.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+|++++. .|++| ..|++.|.++||+|.++...
T Consensus 1 ~~vlItG~-------~G~iG---~~l~~~L~~~g~~V~~~~r~ 33 (328)
T TIGR03466 1 MKVLVTGA-------TGFVG---SAVVRLLLEQGEEVRVLVRP 33 (328)
T ss_pred CeEEEECC-------ccchh---HHHHHHHHHCCCEEEEEEec
Confidence 56665543 35555 56888899999999888754
No 367
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=25.97 E-value=52 Score=30.57 Aligned_cols=28 Identities=29% Similarity=0.339 Sum_probs=23.2
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||.|..-..++++|.++||+|++++.+
T Consensus 4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~ 31 (183)
T PF13460_consen 4 FGATGFVGRALAKQLLRRGHEVTALVRS 31 (183)
T ss_dssp ETTTSHHHHHHHHHHHHTTSEEEEEESS
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEecC
Confidence 4555666678999999999999999976
No 368
>PRK12939 short chain dehydrogenase; Provisional
Probab=25.97 E-value=88 Score=30.52 Aligned_cols=35 Identities=31% Similarity=0.408 Sum_probs=24.6
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++++|++++. .||+| ..+++.|.++||+|.++..+
T Consensus 6 ~~~~vlItGa-------~g~iG---~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 6 AGKRALVTGA-------ARGLG---AAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred CCCEEEEeCC-------CChHH---HHHHHHHHHcCCEEEEEeCC
Confidence 3466665553 46666 56888899999998887543
No 369
>PLN02253 xanthoxin dehydrogenase
Probab=25.88 E-value=1e+02 Score=30.96 Aligned_cols=25 Identities=16% Similarity=0.380 Sum_probs=19.7
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 27 s~gIG---~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 27 ATGIG---ESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred CchHH---HHHHHHHHHcCCEEEEEeCC
Confidence 46766 56888999999999887643
No 370
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=25.81 E-value=99 Score=31.76 Aligned_cols=38 Identities=29% Similarity=0.394 Sum_probs=28.0
Q ss_pred ccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+..++||++.+ |.|-+-.-|+..|..+||+|.++---
T Consensus 23 ~p~~~lrI~itG----------gaGFIgSHLvdkLm~egh~VIa~Dn~ 60 (350)
T KOG1429|consen 23 KPSQNLRILITG----------GAGFIGSHLVDKLMTEGHEVIALDNY 60 (350)
T ss_pred cCCCCcEEEEec----------CcchHHHHHHHHHHhcCCeEEEEecc
Confidence 345569998754 44545567999999999999887543
No 371
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=25.73 E-value=85 Score=31.92 Aligned_cols=32 Identities=34% Similarity=0.462 Sum_probs=23.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||.+|+. |-+ -..++.+|.+.||+|.++..+
T Consensus 1 m~I~IIG~--------G~m---G~sla~~L~~~g~~V~~~d~~ 32 (279)
T PRK07417 1 MKIGIVGL--------GLI---GGSLGLDLRSLGHTVYGVSRR 32 (279)
T ss_pred CeEEEEee--------cHH---HHHHHHHHHHCCCEEEEEECC
Confidence 68888873 333 356888899999999888765
No 372
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=25.72 E-value=1.2e+02 Score=30.60 Aligned_cols=40 Identities=18% Similarity=0.221 Sum_probs=30.5
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
++.|++.|+.. .| ..|-.....+||.+|++.|++|.+|=.
T Consensus 101 ~~~~vi~vts~-~~---g~Gktt~a~nLA~~la~~g~~VllID~ 140 (274)
T TIGR03029 101 EGRKALAVVSA-KS---GEGCSYIAANLAIVFSQLGEKTLLIDA 140 (274)
T ss_pred CCCeEEEEECC-CC---CCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 34666666654 23 567888999999999999999998854
No 373
>PRK07890 short chain dehydrogenase; Provisional
Probab=25.71 E-value=89 Score=30.74 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=24.4
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++++|++++. +||+| ..+++.|+++|++|.++...
T Consensus 4 ~~k~vlItGa-------~~~IG---~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 4 KGKVVVVSGV-------GPGLG---RTLAVRAARAGADVVLAART 38 (258)
T ss_pred CCCEEEEECC-------CCcHH---HHHHHHHHHcCCEEEEEeCC
Confidence 3455555543 46776 57888899999999777643
No 374
>PRK02255 putrescine carbamoyltransferase; Provisional
Probab=25.40 E-value=7.2e+02 Score=26.21 Aligned_cols=88 Identities=9% Similarity=-0.014 Sum_probs=52.0
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC----hhHHHHHHHHHHHCCCceEEEe
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVA 464 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~ 464 (612)
-.+++.+|...+-+...|.|+|-+ ..=...++.++..+ ++++.+++... +.+.+.+++.+...+..+...
T Consensus 140 ~Ti~e~~g~g~~l~glkv~~vGD~--~~v~~Sl~~~~~~~---g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~- 213 (338)
T PRK02255 140 FTMIEHLPEGKKLEDCKVVFVGDA--TQVCVSLMFIATKM---GMDFVHFGPKGYQLPEEHLAIAEENCEVSGGSVLVT- 213 (338)
T ss_pred HHHHHHhCCCCCCCCCEEEEECCC--chHHHHHHHHHHhC---CCEEEEECCCccccCHHHHHHHHHHHHhcCCeEEEE-
Confidence 345566642101123789999976 23456667777766 78999998743 234444455444444434322
Q ss_pred ccChHHHHHHHHhccEEEEcCC
Q 007212 465 KFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 465 ~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
..+.+.+..||++.....
T Consensus 214 ----~d~~eav~~aDvvy~~~w 231 (338)
T PRK02255 214 ----DDVDEAVKDADFVYTDVW 231 (338)
T ss_pred ----cCHHHHhCCCCEEEEccc
Confidence 223357999999888653
No 375
>PLN02527 aspartate carbamoyltransferase
Probab=25.36 E-value=6.3e+02 Score=26.18 Aligned_cols=107 Identities=16% Similarity=0.177 Sum_probs=62.0
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCe
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 433 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~ 433 (612)
|.|+.|-....|... -.+--.+++.+|-- +...|.|+|-....+=...++.++..+ .++
T Consensus 121 VINa~~g~~~HPtQ~----------------LaDl~Ti~e~~g~l---~g~kva~vGD~~~~rv~~Sl~~~~~~~--~g~ 179 (306)
T PLN02527 121 VINAGDGPGQHPTQA----------------LLDVYTIQREIGRL---DGIKVGLVGDLANGRTVRSLAYLLAKY--EDV 179 (306)
T ss_pred EEECCCCCCCChHHH----------------HHHHHHHHHHhCCc---CCCEEEEECCCCCChhHHHHHHHHHhc--CCC
Confidence 567776556677532 11233455666632 237899999765445578888888776 578
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCC
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
++.+++...-...+.+.+.+.+.+..+... + .+.+.++.||++.....
T Consensus 180 ~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~---~--d~~~a~~~aDvvyt~~~ 227 (306)
T PLN02527 180 KIYFVAPDVVKMKDDIKDYLTSKGVEWEES---S--DLMEVASKCDVLYQTRI 227 (306)
T ss_pred EEEEECCCccCCCHHHHHHHHHcCCEEEEE---c--CHHHHhCCCCEEEECCc
Confidence 899998643111223333333333333221 1 23357899999887653
No 376
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=25.34 E-value=5.5e+02 Score=27.41 Aligned_cols=115 Identities=11% Similarity=0.031 Sum_probs=67.3
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-hhHHHHHHH--HH--H--HCC-
Q 007212 386 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQ--LE--I--LYP- 457 (612)
Q Consensus 386 ~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-~~~~~~l~~--l~--~--~~~- 457 (612)
..+.++.+.+|++..++..+|..++ -+.-.+..++++++.. ..++++.+-.+-. ......+-. +. . +.+
T Consensus 165 ~~~~~~~~~lg~~~~~~~~~vSLF~--Ye~~al~~ll~~~~~~-~~pv~lLvp~Gr~~~~v~~~l~~~~~~~g~~~~~g~ 241 (371)
T TIGR03837 165 AAQRALLRRLGVGPEPDALLVSLFC--YENAALPALLDALAQS-GSPVHLLVPEGRALAAVAAWLGDALLAAGDVHRRGA 241 (371)
T ss_pred HHHHHHHHHcCCCCCCCCeEEEEEe--cCChhHHHHHHHHHhC-CCCeEEEecCCccHHHHHHHhCccccCCccccccCc
Confidence 3456677888996444444443333 2445688999999875 2456665544321 222222210 00 0 111
Q ss_pred CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 458 EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 458 ~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
..+..++-.+.+....++..||+-++=-. =+++-|...|+|.|=--
T Consensus 242 L~~~~LPf~~Q~~yD~LLW~cD~NfVRGE-----DSFVRAqWAgkPfvWhI 287 (371)
T TIGR03837 242 LTVAVLPFVPQDDYDRLLWACDLNFVRGE-----DSFVRAQWAGKPFVWHI 287 (371)
T ss_pred eEEEEcCCCChhhHHHHHHhChhcEeech-----hHHHHHHHcCCCceeec
Confidence 13444444577788889999999875432 25889999999987544
No 377
>PLN02208 glycosyltransferase family protein
Probab=25.05 E-value=1.1e+02 Score=33.71 Aligned_cols=39 Identities=23% Similarity=0.185 Sum_probs=31.1
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+++|+++. +| .-|--.=+.+|++.|+.+|++|+++++.
T Consensus 3 ~~~hvv~~P---~p---aqGHi~P~l~LAk~La~~G~~VT~vtt~ 41 (442)
T PLN02208 3 PKFHAFMFP---WF---AFGHMIPFLHLANKLAEKGHRVTFLLPK 41 (442)
T ss_pred CCCEEEEec---Cc---cccHHHHHHHHHHHHHhCCCEEEEEecc
Confidence 357788776 24 3566777889999999999999999965
No 378
>PRK00211 sulfur relay protein TusC; Validated
Probab=24.95 E-value=1.1e+02 Score=26.87 Aligned_cols=39 Identities=23% Similarity=0.055 Sum_probs=28.1
Q ss_pred ceEEEEEecccCcccccc-HHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGG-LGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG-~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+||... +|+ |. .+.-..+++-+++..+++|.|+-..
T Consensus 2 ~ki~~i~~~-~Py---g~~~~~eaLd~ala~~a~~~~v~vff~~ 41 (119)
T PRK00211 2 KRIAFVFRQ-APH---GTASGREGLDALLATSAFTEDIGVFFID 41 (119)
T ss_pred ceEEEEecC-CCC---CCHHHHHHHHHHHHHhcccCCeeEEEEh
Confidence 579999887 685 43 3333344578888889999999876
No 379
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=24.86 E-value=2.6e+02 Score=29.02 Aligned_cols=45 Identities=22% Similarity=0.386 Sum_probs=32.6
Q ss_pred HHHHHHHhccEEEE--cCCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007212 470 LAHMIIAGADFILI--PSRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 470 ~~~~i~~~aDv~v~--pS~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
.+.++++.||++++ |..-|. ++-..++.|--|.-+|-+.-|++.|
T Consensus 189 ~l~ell~~sDvv~lh~Plt~~T~~li~~~~~~~Mk~~a~lIN~aRG~vVD 238 (311)
T PRK08410 189 SLEELLKTSDIISIHAPLNEKTKNLIAYKELKLLKDGAILINVGRGGIVN 238 (311)
T ss_pred cHHHHhhcCCEEEEeCCCCchhhcccCHHHHHhCCCCeEEEECCCccccC
Confidence 35678999999876 334454 5556888888888888777777654
No 380
>PRK06932 glycerate dehydrogenase; Provisional
Probab=24.84 E-value=2.8e+02 Score=28.84 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=33.1
Q ss_pred HHHHHHhccEEEE--cCCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007212 471 AHMIIAGADFILI--PSRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~i~~~aDv~v~--pS~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++ |..-|. ++-..++.|--|.-+|-+.-|++.+
T Consensus 191 l~ell~~sDiv~l~~Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~~Vd 239 (314)
T PRK06932 191 FEEVLKQADIVTLHCPLTETTQNLINAETLALMKPTAFLINTGRGPLVD 239 (314)
T ss_pred HHHHHHhCCEEEEcCCCChHHhcccCHHHHHhCCCCeEEEECCCccccC
Confidence 5578999999886 333344 5667999998898888888777665
No 381
>PRK04148 hypothetical protein; Provisional
Probab=24.80 E-value=98 Score=27.98 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=23.0
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|||+.|+.- .+ ..++..|++.||+|+.+=-.
T Consensus 17 ~~kileIG~G---------fG---~~vA~~L~~~G~~ViaIDi~ 48 (134)
T PRK04148 17 NKKIVELGIG---------FY---FKVAKKLKESGFDVIVIDIN 48 (134)
T ss_pred CCEEEEEEec---------CC---HHHHHHHHHCCCEEEEEECC
Confidence 5889988843 11 24677889999999888543
No 382
>PRK06523 short chain dehydrogenase; Provisional
Probab=24.76 E-value=93 Score=30.73 Aligned_cols=34 Identities=35% Similarity=0.489 Sum_probs=24.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|++.+. .||+| ..+++.|+++|++|.++...
T Consensus 9 ~k~vlItGa-------s~gIG---~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 9 GKRALVTGG-------TKGIG---AATVARLLEAGARVVTTARS 42 (260)
T ss_pred CCEEEEECC-------CCchh---HHHHHHHHHCCCEEEEEeCC
Confidence 455655543 47777 57888899999998877643
No 383
>PRK07326 short chain dehydrogenase; Provisional
Probab=24.73 E-value=96 Score=30.05 Aligned_cols=33 Identities=33% Similarity=0.455 Sum_probs=23.3
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+++|++++. +||+| ..+++.|+++|++|.++..
T Consensus 6 ~~~ilItGa-------tg~iG---~~la~~l~~~g~~V~~~~r 38 (237)
T PRK07326 6 GKVALITGG-------SKGIG---FAIAEALLAEGYKVAITAR 38 (237)
T ss_pred CCEEEEECC-------CCcHH---HHHHHHHHHCCCEEEEeeC
Confidence 345665553 46666 5688889999999888764
No 384
>PRK05723 flavodoxin; Provisional
Probab=24.72 E-value=1e+02 Score=28.33 Aligned_cols=36 Identities=17% Similarity=0.174 Sum_probs=29.0
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
|||.++-. +.+|-.+.+...|+..|.++|++|.++.
T Consensus 1 ~~i~I~yg-----S~tG~ae~~A~~la~~l~~~g~~~~~~~ 36 (151)
T PRK05723 1 MKVAILSG-----SVYGTAEEVARHAESLLKAAGFEAWHNP 36 (151)
T ss_pred CeEEEEEE-----cCchHHHHHHHHHHHHHHHCCCceeecC
Confidence 67777743 2378889999999999999999998753
No 385
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=24.61 E-value=52 Score=32.12 Aligned_cols=27 Identities=33% Similarity=0.449 Sum_probs=21.3
Q ss_pred ccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 101 GGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 101 GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|.|..=..|+..|++.||+|++-+.+
T Consensus 7 ~GtGniG~alA~~~a~ag~eV~igs~r 33 (211)
T COG2085 7 IGTGNIGSALALRLAKAGHEVIIGSSR 33 (211)
T ss_pred eccChHHHHHHHHHHhCCCeEEEecCC
Confidence 344445578999999999999988776
No 386
>PRK09135 pteridine reductase; Provisional
Probab=24.61 E-value=95 Score=30.20 Aligned_cols=25 Identities=28% Similarity=0.368 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 15 ~g~iG---~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 15 ARRIG---AAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 46666 56888899999999888754
No 387
>PRK06914 short chain dehydrogenase; Provisional
Probab=24.61 E-value=97 Score=31.06 Aligned_cols=25 Identities=24% Similarity=0.247 Sum_probs=19.4
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++||+|.++..+
T Consensus 12 sg~iG---~~la~~l~~~G~~V~~~~r~ 36 (280)
T PRK06914 12 SSGFG---LLTTLELAKKGYLVIATMRN 36 (280)
T ss_pred CchHH---HHHHHHHHhCCCEEEEEeCC
Confidence 46666 67888899999999887644
No 388
>PRK10446 ribosomal protein S6 modification protein; Provisional
Probab=24.53 E-value=84 Score=32.33 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=27.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++.+..=+ ....+.+++.++||+|.++.+.
T Consensus 1 m~~~i~~~~~s~~--------s~~~~~~a~~~~g~~v~~i~~~ 35 (300)
T PRK10446 1 MKIAILSRDGTLY--------SCKRLREAAIQRGHLVEILDPL 35 (300)
T ss_pred CeEEEEecCCcch--------hHHHHHHHHHHcCCeEEEEehH
Confidence 8999999763222 3357899999999999999765
No 389
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=24.46 E-value=91 Score=32.70 Aligned_cols=34 Identities=24% Similarity=0.184 Sum_probs=24.8
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.+|||++++. .|.+| ..|++.|.++|++|.++..
T Consensus 9 ~~~~vLVtG~-------~GfIG---~~l~~~L~~~G~~V~~~~r 42 (353)
T PLN02896 9 ATGTYCVTGA-------TGYIG---SWLVKLLLQRGYTVHATLR 42 (353)
T ss_pred CCCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 3688887653 24444 5688889999999988753
No 390
>PRK09186 flagellin modification protein A; Provisional
Probab=24.46 E-value=96 Score=30.47 Aligned_cols=25 Identities=24% Similarity=0.295 Sum_probs=19.4
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 13 s~giG---~~~a~~l~~~g~~v~~~~r~ 37 (256)
T PRK09186 13 GGLIG---SALVKAILEAGGIVIAADID 37 (256)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEecC
Confidence 46766 56788899999999777543
No 391
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=24.45 E-value=82 Score=31.94 Aligned_cols=28 Identities=29% Similarity=0.623 Sum_probs=21.7
Q ss_pred cccHH--HHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~--~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| +.+.+|+.+|+++|++|.+|=..
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVLliD~D 38 (279)
T PRK13230 9 KGGIGKSTTVCNIAAALAESGKKVLVVGCD 38 (279)
T ss_pred CCCCcHHHHHHHHHHHHHhCCCEEEEEeeC
Confidence 45555 55678999999999999888543
No 392
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=24.20 E-value=78 Score=30.84 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=23.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..+++.|+++||+|.++..+
T Consensus 1 ~~~~lItGa------~g~iG---~~l~~~l~~~g~~v~~~~~~ 34 (247)
T PRK09730 1 MAIALVTGG------SRGIG---RATALLLAQEGYTVAVNYQQ 34 (247)
T ss_pred CCEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 566666532 45665 56888899999999876543
No 393
>PLN02256 arogenate dehydrogenase
Probab=24.14 E-value=1e+02 Score=31.92 Aligned_cols=36 Identities=28% Similarity=0.394 Sum_probs=27.0
Q ss_pred cCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+++|||++|+ .|.+| ..++..|.+.|++|.++.+.
T Consensus 33 ~~~~~kI~IIG--------~G~mG---~slA~~L~~~G~~V~~~d~~ 68 (304)
T PLN02256 33 KSRKLKIGIVG--------FGNFG---QFLAKTFVKQGHTVLATSRS 68 (304)
T ss_pred cCCCCEEEEEe--------eCHHH---HHHHHHHHhCCCEEEEEECc
Confidence 34679999998 24444 35788888999999887755
No 394
>PRK08267 short chain dehydrogenase; Provisional
Probab=24.13 E-value=96 Score=30.69 Aligned_cols=25 Identities=28% Similarity=0.367 Sum_probs=19.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++|++|.++..+
T Consensus 10 sg~iG---~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 10 ASGIG---RATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred CchHH---HHHHHHHHHCCCeEEEEeCC
Confidence 46666 67888899999999888754
No 395
>PRK05854 short chain dehydrogenase; Provisional
Probab=24.07 E-value=1.2e+02 Score=31.23 Aligned_cols=34 Identities=32% Similarity=0.336 Sum_probs=24.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|.++|+.. ++|+| ..+++.|+++|++|.+++.+
T Consensus 14 gk~~lITGa------s~GIG---~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 14 GKRAVVTGA------SDGLG---LGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred CCEEEEeCC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 345556532 57877 57889999999999877654
No 396
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=24.03 E-value=3.6e+02 Score=24.88 Aligned_cols=75 Identities=11% Similarity=0.149 Sum_probs=49.1
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCCh------hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK------PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~------~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 477 (612)
..|.|+|- .+..=...++.++.++ +..+.+++...- ++.+..++...+.+.++... +...+.++.
T Consensus 3 l~i~~vGD-~~~rv~~Sl~~~~~~~---g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~g~~i~~~-----~~~~e~l~~ 73 (158)
T PF00185_consen 3 LKIAYVGD-GHNRVAHSLIELLAKF---GMEVVLIAPEGLRYPPDPEVLEKAKKNAKKNGGKITIT-----DDIEEALKG 73 (158)
T ss_dssp EEEEEESS-TTSHHHHHHHHHHHHT---TSEEEEESSGGGGGSHHHHHHHHHHHHHHHHTTEEEEE-----SSHHHHHTT
T ss_pred CEEEEECC-CCChHHHHHHHHHHHc---CCEEEEECCCcccCCCCHHHHHHHHHHHHHhCCCeEEE-----eCHHHhcCC
Confidence 57999996 4556678888888888 778888887441 23344455555555545444 223357999
Q ss_pred ccEEEEcCCC
Q 007212 478 ADFILIPSRF 487 (612)
Q Consensus 478 aDv~v~pS~~ 487 (612)
||++......
T Consensus 74 aDvvy~~~~~ 83 (158)
T PF00185_consen 74 ADVVYTDRWQ 83 (158)
T ss_dssp -SEEEEESSS
T ss_pred CCEEEEcCcc
Confidence 9998776654
No 397
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=23.99 E-value=4.9e+02 Score=22.76 Aligned_cols=54 Identities=17% Similarity=0.034 Sum_probs=41.6
Q ss_pred ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCccc
Q 007212 459 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 459 ~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
.+......+.++....++.+|+++..+.. .+.-.+++++ -++-.|++...|...
T Consensus 20 ~v~~~~~~~~~~~~~~l~~~d~ii~~~~~-~~~~~~l~~~-~~Lk~I~~~~~G~d~ 73 (133)
T PF00389_consen 20 EVEFCDSPSEEELAERLKDADAIIVGSGT-PLTAEVLEAA-PNLKLISTAGAGVDN 73 (133)
T ss_dssp EEEEESSSSHHHHHHHHTTESEEEESTTS-TBSHHHHHHH-TT-SEEEESSSSCTT
T ss_pred eEEEeCCCCHHHHHHHhCCCeEEEEcCCC-CcCHHHHhcc-ceeEEEEEcccccCc
Confidence 47777777788888899999999976543 5778899888 888888888777653
No 398
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=23.91 E-value=3.1e+02 Score=26.24 Aligned_cols=31 Identities=13% Similarity=0.058 Sum_probs=22.8
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
..=|++++..-.+ -...+.||...|.|+|+-
T Consensus 126 ~~Pdlviv~~~~~-~~~ai~Ea~~l~IP~I~i 156 (193)
T cd01425 126 RLPDLVIVLDPRK-EHQAIREASKLGIPVIAI 156 (193)
T ss_pred cCCCEEEEeCCcc-chHHHHHHHHcCCCEEEE
Confidence 4556766665432 377899999999999865
No 399
>PRK06953 short chain dehydrogenase; Provisional
Probab=23.89 E-value=1e+02 Score=29.77 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=23.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.. .||+| ..+++.|+++|++|.++...
T Consensus 1 ~~~vlvtG~------sg~iG---~~la~~L~~~G~~v~~~~r~ 34 (222)
T PRK06953 1 MKTVLIVGA------SRGIG---REFVRQYRADGWRVIATARD 34 (222)
T ss_pred CceEEEEcC------CCchh---HHHHHHHHhCCCEEEEEECC
Confidence 555556532 45665 57888899999999887644
No 400
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=23.84 E-value=1.2e+02 Score=31.16 Aligned_cols=43 Identities=9% Similarity=-0.052 Sum_probs=30.2
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|.+|||+++..-..+. .--.-......+++|.+.||+|..+-.
T Consensus 1 ~~~~~i~vl~gg~s~e--~~vsl~s~~~v~~aL~~~g~~~~~~~~ 43 (296)
T PRK14569 1 MKNEKIVVLYGGDSPE--REVSLKSGKAVLDSLISQGYDAVGVDA 43 (296)
T ss_pred CCCcEEEEEeCCCCCc--hHhHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 4578999998654442 222334556789999999999987753
No 401
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=23.76 E-value=95 Score=34.24 Aligned_cols=30 Identities=23% Similarity=0.376 Sum_probs=26.2
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEecCC
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~ 129 (612)
..|--..+..+++.|+++||+|+++++...
T Consensus 15 ~~sH~~~~~~la~~L~~~gh~vt~~~~~~~ 44 (496)
T KOG1192|consen 15 GQSHLNPMLQLAKRLAERGHNVTVVTPSFN 44 (496)
T ss_pred cccHHHHHHHHHHHHHHcCCceEEEEeech
Confidence 467778899999999999999999998754
No 402
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=23.75 E-value=3.6e+02 Score=22.79 Aligned_cols=76 Identities=13% Similarity=0.179 Sum_probs=46.0
Q ss_pred HHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCCCCCcHHHHHHHH
Q 007212 422 AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFEPCGLIQLHAMR 499 (612)
Q Consensus 422 i~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~E~~gl~~lEAma 499 (612)
+.++... .++++++-+=+.. .+..++...+++ +. .|.. ..++++ ..|++++.+....-.-.+.+++.
T Consensus 16 ~~~~~~~-~~~~~v~~v~d~~---~~~~~~~~~~~~--~~---~~~~--~~~ll~~~~~D~V~I~tp~~~h~~~~~~~l~ 84 (120)
T PF01408_consen 16 LRALLRS-SPDFEVVAVCDPD---PERAEAFAEKYG--IP---VYTD--LEELLADEDVDAVIIATPPSSHAEIAKKALE 84 (120)
T ss_dssp HHHHHHT-TTTEEEEEEECSS---HHHHHHHHHHTT--SE---EESS--HHHHHHHTTESEEEEESSGGGHHHHHHHHHH
T ss_pred HHHHHhc-CCCcEEEEEEeCC---HHHHHHHHHHhc--cc---chhH--HHHHHHhhcCCEEEEecCCcchHHHHHHHHH
Confidence 4444443 2567766443333 233444555655 33 2222 224555 78999988876666667889999
Q ss_pred cCCceEEcC
Q 007212 500 YGTVPIVAS 508 (612)
Q Consensus 500 ~G~PvI~s~ 508 (612)
.|++|++-.
T Consensus 85 ~g~~v~~EK 93 (120)
T PF01408_consen 85 AGKHVLVEK 93 (120)
T ss_dssp TTSEEEEES
T ss_pred cCCEEEEEc
Confidence 999888876
No 403
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=23.71 E-value=1.1e+02 Score=33.11 Aligned_cols=38 Identities=29% Similarity=0.378 Sum_probs=28.5
Q ss_pred CCceEEEEEecccCccccccHH--HHhhchHHHHHhCCCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~--~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.+|+|+-|... .||+| +.+..|+.+|+.+|++|.+|=.
T Consensus 119 ~~~~vIav~n~------KGGvGKTTta~nLA~~LA~~G~rVLlIDl 158 (405)
T PRK13869 119 EHLQVIAVTNF------KGGSGKTTTSAHLAQYLALQGYRVLAVDL 158 (405)
T ss_pred CCceEEEEEcC------CCCCCHHHHHHHHHHHHHhcCCceEEEcC
Confidence 46887777654 56655 4567899999999999988843
No 404
>PRK06701 short chain dehydrogenase; Provisional
Probab=23.63 E-value=1e+02 Score=31.38 Aligned_cols=36 Identities=19% Similarity=0.292 Sum_probs=25.6
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|+|++++. .||+| ..+++.|+++|++|.++..+
T Consensus 44 ~~~k~iLItGa-------sggIG---~~la~~l~~~G~~V~l~~r~ 79 (290)
T PRK06701 44 LKGKVALITGG-------DSGIG---RAVAVLFAKEGADIAIVYLD 79 (290)
T ss_pred CCCCEEEEeCC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34556655553 46776 67889999999999877654
No 405
>PRK07102 short chain dehydrogenase; Provisional
Probab=23.60 E-value=98 Score=30.26 Aligned_cols=25 Identities=24% Similarity=0.252 Sum_probs=19.7
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++|++|.++...
T Consensus 10 s~giG---~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 10 TSDIA---RACARRYAAAGARLYLAARD 34 (243)
T ss_pred CcHHH---HHHHHHHHhcCCEEEEEeCC
Confidence 46666 67888999999999887654
No 406
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=23.51 E-value=2.8e+02 Score=24.90 Aligned_cols=68 Identities=18% Similarity=0.092 Sum_probs=39.6
Q ss_pred HHHHhccEEEEcCCCCC-----CcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHH
Q 007212 473 MIIAGADFILIPSRFEP-----CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~E~-----~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i 547 (612)
.++..||++|+-.- |- -.+-.--|.+.|+|.|+-....+.--+++-...-+ +-..++++.++.+
T Consensus 68 ~li~~aDvVVvrFG-ekYKQWNaAfDAg~a~AlgKplI~lh~~~~~HpLKEvda~A~----------a~~et~~Qvv~iL 136 (141)
T PF11071_consen 68 TLIEKADVVVVRFG-EKYKQWNAAFDAGYAAALGKPLITLHPEELHHPLKEVDAAAL----------AVAETPEQVVEIL 136 (141)
T ss_pred HHHhhCCEEEEEec-hHHHHHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHhhH----------hhhCCHHHHHHHH
Confidence 58999999986431 21 12223446799999998876544444443222221 1346677777666
Q ss_pred HHHH
Q 007212 548 RRAL 551 (612)
Q Consensus 548 ~~ll 551 (612)
..++
T Consensus 137 ~Yv~ 140 (141)
T PF11071_consen 137 RYVL 140 (141)
T ss_pred HHHh
Confidence 5543
No 407
>PRK08105 flavodoxin; Provisional
Probab=23.50 E-value=1.1e+02 Score=28.10 Aligned_cols=28 Identities=25% Similarity=0.177 Sum_probs=24.5
Q ss_pred ccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 99 KTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.+|-.+.+...|+..|.++|++|.++..
T Consensus 11 ~tGnte~~A~~l~~~l~~~g~~~~~~~~ 38 (149)
T PRK08105 11 VYGNALLVAEEAEAILTAQGHEVTLFED 38 (149)
T ss_pred CchHHHHHHHHHHHHHHhCCCceEEech
Confidence 3788899999999999999999988764
No 408
>PRK07060 short chain dehydrogenase; Provisional
Probab=23.25 E-value=1.1e+02 Score=29.85 Aligned_cols=36 Identities=33% Similarity=0.501 Sum_probs=24.4
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++++|++++. .||+| ..+++.|+++||+|.+++..
T Consensus 7 ~~~~~~lItGa-------~g~iG---~~~a~~l~~~g~~V~~~~r~ 42 (245)
T PRK07060 7 FSGKSVLVTGA-------SSGIG---RACAVALAQRGARVVAAARN 42 (245)
T ss_pred cCCCEEEEeCC-------cchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34456665543 46666 45677899999998877643
No 409
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=23.13 E-value=1e+02 Score=30.15 Aligned_cols=25 Identities=24% Similarity=0.400 Sum_probs=19.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++|++|.++..+
T Consensus 13 ~g~iG---~~~a~~l~~~g~~v~~~~~r 37 (250)
T PRK08063 13 SRGIG---KAIALRLAEEGYDIAVNYAR 37 (250)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 46776 56888899999998775443
No 410
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=23.09 E-value=1.2e+02 Score=32.57 Aligned_cols=40 Identities=33% Similarity=0.423 Sum_probs=29.6
Q ss_pred CCCceEEEEEecccCccccccHH--HHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~--~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..+|+|+.|+.. .||+| +...+||.+|+.+|++|.+|=..
T Consensus 101 g~~~~vI~v~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID~D 142 (387)
T TIGR03453 101 GEHLQVIAVTNF------KGGSGKTTTAAHLAQYLALRGYRVLAIDLD 142 (387)
T ss_pred CCCceEEEEEcc------CCCcCHHHHHHHHHHHHHhcCCCEEEEecC
Confidence 356887777754 45554 55678999999999999888543
No 411
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=22.97 E-value=47 Score=29.71 Aligned_cols=35 Identities=34% Similarity=0.447 Sum_probs=24.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
...|||.||+.- .+-..|+.+|.+.||.|.-+..+
T Consensus 8 ~~~l~I~iIGaG-----------rVG~~La~aL~~ag~~v~~v~sr 42 (127)
T PF10727_consen 8 AARLKIGIIGAG-----------RVGTALARALARAGHEVVGVYSR 42 (127)
T ss_dssp ----EEEEECTS-----------CCCCHHHHHHHHTTSEEEEESSC
T ss_pred CCccEEEEECCC-----------HHHHHHHHHHHHCCCeEEEEEeC
Confidence 347999999852 23367999999999999888765
No 412
>PRK08265 short chain dehydrogenase; Provisional
Probab=22.88 E-value=1.1e+02 Score=30.28 Aligned_cols=25 Identities=28% Similarity=0.372 Sum_probs=19.7
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++|++|.++..+
T Consensus 15 s~gIG---~~ia~~l~~~G~~V~~~~r~ 39 (261)
T PRK08265 15 ATLIG---AAVARALVAAGARVAIVDID 39 (261)
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46666 67889999999999877644
No 413
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=22.77 E-value=2.6e+02 Score=25.91 Aligned_cols=94 Identities=18% Similarity=0.224 Sum_probs=51.4
Q ss_pred cEEEEEccCccccCHHHHHHHH------HhcccCC-eEEEE-EecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007212 404 PVIGFIGRLEEQKGSDILAAAI------PHFIKEN-VQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~------~~l~~~~-~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 475 (612)
-+++.+|.-. +|.||.++ .+|.+.. .+|+| +|.|..-..+...... +..+-....-.|... +.+++
T Consensus 5 ~vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~-k~~gl~id~y~f~ps-l~e~I 78 (170)
T KOG3349|consen 5 TVFVTVGTTS----FDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIR-KNGGLTIDGYDFSPS-LTEDI 78 (170)
T ss_pred EEEEEecccc----HHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhc-ccCCeEEEEEecCcc-HHHHH
Confidence 3667777643 67777655 2333333 33433 5776432333333332 222212222234333 34688
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
+.||+++.- +=.-+++|.+..|+|.|+-
T Consensus 79 ~~AdlVIsH----AGaGS~letL~l~KPlivV 106 (170)
T KOG3349|consen 79 RSADLVISH----AGAGSCLETLRLGKPLIVV 106 (170)
T ss_pred hhccEEEec----CCcchHHHHHHcCCCEEEE
Confidence 889999933 2345789999999998754
No 414
>PRK06197 short chain dehydrogenase; Provisional
Probab=22.62 E-value=1.3e+02 Score=30.74 Aligned_cols=25 Identities=36% Similarity=0.426 Sum_probs=19.6
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 25 s~gIG---~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 25 NTGLG---YETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred CCcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57877 56788899999998777643
No 415
>PRK06194 hypothetical protein; Provisional
Probab=22.61 E-value=1.1e+02 Score=30.74 Aligned_cols=24 Identities=21% Similarity=0.245 Sum_probs=18.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++|++|.++..
T Consensus 15 sggIG---~~la~~l~~~G~~V~~~~r 38 (287)
T PRK06194 15 ASGFG---LAFARIGAALGMKLVLADV 38 (287)
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEeC
Confidence 46666 5688899999999977653
No 416
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=22.52 E-value=96 Score=32.27 Aligned_cols=34 Identities=32% Similarity=0.303 Sum_probs=24.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|+|++.+. +|++| ..|+++|.++|++|.++...
T Consensus 6 ~~~vlVTGa-------tGfiG---~~l~~~L~~~G~~V~~~~r~ 39 (340)
T PLN02653 6 RKVALITGI-------TGQDG---SYLTEFLLSKGYEVHGIIRR 39 (340)
T ss_pred CCEEEEECC-------CCccH---HHHHHHHHHCCCEEEEEecc
Confidence 466655543 46666 67889999999999887643
No 417
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=22.49 E-value=1.2e+02 Score=30.63 Aligned_cols=121 Identities=14% Similarity=-0.063 Sum_probs=69.1
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
.+++..| .|.+..+... .....+.+.++ ... +-.+.+.+++....+-+...+.|+.+.-..+++..++=++
T Consensus 131 ~i~lttG----~k~l~~f~~~---~~~~~~~~RvL-P~~-~~l~~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~l 201 (256)
T TIGR00715 131 RVFLTAG----ASWLSHFSLS---QDEAVVFVRVL-PYP-QALAQALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAV 201 (256)
T ss_pred cEEEecC----cchHHHHhhc---cCCceEEEEEC-CCc-hhhHHHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEE
Confidence 4777777 4666666442 21233444454 222 2223444443322234667788888777778876655333
Q ss_pred cCCC--C--CCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 484 PSRF--E--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 484 pS~~--E--~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
-+.. + ++--++--|+.+|+|||+-+-+-.+ +. +- ...+.+++.+.+.+++
T Consensus 202 VtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~-----~~-~~------------~~~~~~el~~~l~~~~ 255 (256)
T TIGR00715 202 VTKASGEQGGELEKVKAAEALGINVIRIARPQTI-----PG-VA------------IFDDISQLNQFVARLL 255 (256)
T ss_pred EEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCC-----CC-Cc------------cCCCHHHHHHHHHHhc
Confidence 3442 2 3555788899999999988765321 11 11 1267888888777654
No 418
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=22.44 E-value=1.1e+02 Score=31.50 Aligned_cols=24 Identities=13% Similarity=0.090 Sum_probs=18.2
Q ss_pred ccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 101 GGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 101 GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|++| ..|++.|.++||+|.++...
T Consensus 15 G~IG---~~l~~~L~~~G~~V~~~~r~ 38 (325)
T PLN02989 15 GYIA---SWIVKLLLFRGYTINATVRD 38 (325)
T ss_pred hHHH---HHHHHHHHHCCCEEEEEEcC
Confidence 5554 67888899999999876543
No 419
>PRK05875 short chain dehydrogenase; Provisional
Probab=22.43 E-value=1.1e+02 Score=30.61 Aligned_cols=36 Identities=28% Similarity=0.425 Sum_probs=24.6
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++.++|++.+. .||+| ..+++.|+++|++|.+++..
T Consensus 5 ~~~k~vlItGa-------sg~IG---~~la~~l~~~G~~V~~~~r~ 40 (276)
T PRK05875 5 FQDRTYLVTGG-------GSGIG---KGVAAGLVAAGAAVMIVGRN 40 (276)
T ss_pred CCCCEEEEECC-------CcHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 34456655443 46666 67888899999999877643
No 420
>COG4007 Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase [General function prediction only]
Probab=22.41 E-value=52 Score=33.08 Aligned_cols=34 Identities=29% Similarity=0.534 Sum_probs=26.2
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEecCCccccc-cCcc
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDTD 138 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~-~~~~ 138 (612)
.||. .++-++++.||+|.+.-|..+-..+. |+..
T Consensus 31 yGGa-----~mAiefAeAGHDVVLaePn~d~~dd~~w~~v 65 (340)
T COG4007 31 YGGA-----RMAIEFAEAGHDVVLAEPNRDIMDDEHWKRV 65 (340)
T ss_pred CCch-----HHHHHHHHcCCcEEeecCCccccCHHHHHHH
Confidence 5876 47888999999999988987765554 6543
No 421
>PRK06398 aldose dehydrogenase; Validated
Probab=22.31 E-value=1.2e+02 Score=30.12 Aligned_cols=24 Identities=21% Similarity=0.419 Sum_probs=18.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++||+|.++..
T Consensus 15 s~gIG---~~ia~~l~~~G~~Vi~~~r 38 (258)
T PRK06398 15 SQGIG---KAVVNRLKEEGSNVINFDI 38 (258)
T ss_pred CchHH---HHHHHHHHHCCCeEEEEeC
Confidence 46777 5688899999999987754
No 422
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=22.24 E-value=5.3e+02 Score=24.11 Aligned_cols=66 Identities=11% Similarity=0.087 Sum_probs=38.6
Q ss_pred HHHHHHHHhccc--CCeEEEEEecCChhH-HHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCC
Q 007212 419 DILAAAIPHFIK--ENVQIIVLGTGKKPM-EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF 487 (612)
Q Consensus 419 d~li~A~~~l~~--~~~~lvivG~g~~~~-~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~ 487 (612)
...++.++++.. .+-+++|+|.|. + ...+.+.-.+.+-++....+. .+.+.+.++.||++|...-.
T Consensus 29 ~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~r~-~~~l~~~l~~aDiVIsat~~ 97 (168)
T cd01080 29 AGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCHSK-TKNLKEHTKQADIVIVAVGK 97 (168)
T ss_pred HHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEECC-chhHHHHHhhCCEEEEcCCC
Confidence 344555555532 578899999986 3 221222222233234444443 34556799999999987764
No 423
>TIGR00041 DTMP_kinase thymidylate kinase. Function: phosphorylation of DTMP to form DTDP in both de novo and salvage pathways of DTTP synthesis. Catalytic activity: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate.
Probab=22.22 E-value=1.4e+02 Score=28.09 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=29.3
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
++|-|++.+. | ..|-++.+..|+++|...|+.|.++..
T Consensus 2 ~g~~IvieG~---~---GsGKsT~~~~L~~~l~~~g~~v~~~~~ 39 (195)
T TIGR00041 2 RGMFIVIEGI---D---GAGKTTQANLLKKLLQENGYDVLFTRE 39 (195)
T ss_pred CceEEEEECC---C---CCCHHHHHHHHHHHHHHcCCeEEEEeC
Confidence 3555666553 3 789999999999999999999876543
No 424
>PRK06753 hypothetical protein; Provisional
Probab=22.19 E-value=74 Score=33.57 Aligned_cols=32 Identities=28% Similarity=0.509 Sum_probs=23.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+|++|+.- | +|+ .+|..|+++|++|+|+=.+
T Consensus 1 ~~V~IvGgG--~----aGl-----~~A~~L~~~g~~v~v~E~~ 32 (373)
T PRK06753 1 MKIAIIGAG--I----GGL-----TAAALLQEQGHEVKVFEKN 32 (373)
T ss_pred CEEEEECCC--H----HHH-----HHHHHHHhCCCcEEEEecC
Confidence 789998852 2 343 4678899999999888533
No 425
>PRK13243 glyoxylate reductase; Reviewed
Probab=22.10 E-value=3e+02 Score=28.91 Aligned_cols=44 Identities=18% Similarity=0.275 Sum_probs=31.9
Q ss_pred HHHHHHhccEEEEcCC--CCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007212 471 AHMIIAGADFILIPSR--FEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~--~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++..- -|. ++-..+++|--|.-+|-+..|++.+
T Consensus 198 l~ell~~aDiV~l~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~~vd 246 (333)
T PRK13243 198 LEELLRESDFVSLHVPLTKETYHMINEERLKLMKPTAILVNTARGKVVD 246 (333)
T ss_pred HHHHHhhCCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECcCchhcC
Confidence 4468999999876443 233 4556889998898888888777664
No 426
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=21.98 E-value=1.3e+02 Score=31.96 Aligned_cols=76 Identities=13% Similarity=0.049 Sum_probs=48.2
Q ss_pred HHHHhccEEEEcCCC--CCC-cHHHHHHHHcCCceEEcC--CCCcccceecCcceEEecccccccccCCCCCHHHHHHHH
Q 007212 473 MIIAGADFILIPSRF--EPC-GLIQLHAMRYGTVPIVAS--TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~--E~~-gl~~lEAma~G~PvI~s~--~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i 547 (612)
.+++..-+++..-.. +.+ -=++.+|+.+|+.+|+-. .....+++.. +.|+. +-+..++++||+-|
T Consensus 223 ~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~--~SfI~--------~~df~s~~~La~yl 292 (349)
T PF00852_consen 223 ELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPP--NSFIH--------VDDFKSPKELADYL 292 (349)
T ss_dssp HHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-G--GGSEE--------GGGSSSHHHHHHHH
T ss_pred ccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCC--CCccc--------hhcCCCHHHHHHHH
Confidence 466666666654333 222 225889999999999877 5566666654 33432 22567899999999
Q ss_pred HHHHHhhCHHHHH
Q 007212 548 RRALATYGTQALA 560 (612)
Q Consensus 548 ~~ll~~~~~~~~~ 560 (612)
..+.++ ++++.
T Consensus 293 ~~l~~n--~~~Y~ 303 (349)
T PF00852_consen 293 KYLDKN--DELYN 303 (349)
T ss_dssp HHHHT---HHHHH
T ss_pred HHHhcC--HHHHh
Confidence 999887 55543
No 427
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=21.88 E-value=8.7e+02 Score=25.80 Aligned_cols=102 Identities=12% Similarity=0.062 Sum_probs=62.4
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC------------hhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK------------KPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~------------~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 471 (612)
+.++..| -..-..-+.+++.++.+++..++++.-|.-+ .+-.+.+.+...+.+-.+ ...-++...+
T Consensus 101 ~l~vIAG-PCsIEs~eq~l~~A~~lk~~g~~~~r~g~~kpRtsp~sf~G~g~~gl~~L~~~~~e~Gl~~-~tev~d~~~v 178 (352)
T PRK13396 101 PVVVVAG-PCSVENEEMIVETAKRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREATGLGI-ITEVMDAADL 178 (352)
T ss_pred eEEEEEe-CCcccCHHHHHHHHHHHHHcCCCEEEeeeecCCCCCcccCCchHHHHHHHHHHHHHcCCcE-EEeeCCHHHH
Confidence 4555555 3334556677777777766566776655311 233455566666666322 2334466666
Q ss_pred HHHHHhccEEEEcCCC-CCCcHHHHHHH-HcCCceEEcCC
Q 007212 472 HMIIAGADFILIPSRF-EPCGLIQLHAM-RYGTVPIVAST 509 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~-E~~gl~~lEAm-a~G~PvI~s~~ 509 (612)
..+...+|++=++|+. ..+. +|++. ..|+||+.+.-
T Consensus 179 ~~~~~~~d~lqIga~~~~n~~--LL~~va~t~kPVllk~G 216 (352)
T PRK13396 179 EKIAEVADVIQVGARNMQNFS--LLKKVGAQDKPVLLKRG 216 (352)
T ss_pred HHHHhhCCeEEECcccccCHH--HHHHHHccCCeEEEeCC
Confidence 5566679999999984 4444 45555 67999998873
No 428
>PRK01713 ornithine carbamoyltransferase; Provisional
Probab=21.84 E-value=9.4e+02 Score=25.26 Aligned_cols=86 Identities=9% Similarity=0.095 Sum_probs=52.0
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC----hhHHHHHHHHHHHCCCceEEEe
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVA 464 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~ 464 (612)
-.+++..|-.- +...|.|+|-+... =...++.++..+ ++++.+++... +.+.+..++.+...+.++...
T Consensus 144 ~Ti~e~~g~~l--~gl~ia~vGD~~~~-v~~Sl~~~~~~~---g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g~~~~~~- 216 (334)
T PRK01713 144 LTMIENCDKPL--SEISYVYIGDARNN-MGNSLLLIGAKL---GMDVRICAPKALLPEASLVEMCEKFAKESGARITVT- 216 (334)
T ss_pred HHHHHHcCCCc--CCcEEEEECCCccC-HHHHHHHHHHHc---CCEEEEECCchhcCCHHHHHHHHHHHHHcCCeEEEE-
Confidence 34555555211 23689999976432 456678888877 78999988643 123344455555555444322
Q ss_pred ccChHHHHHHHHhccEEEEcC
Q 007212 465 KFNIPLAHMIIAGADFILIPS 485 (612)
Q Consensus 465 ~~~~~~~~~i~~~aDv~v~pS 485 (612)
+.+.+.+..||++....
T Consensus 217 ----~d~~~a~~~aDvVyt~~ 233 (334)
T PRK01713 217 ----DDIDKAVKGVDFVHTDV 233 (334)
T ss_pred ----cCHHHHhCCCCEEEEcc
Confidence 22335799999998754
No 429
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=21.77 E-value=1.4e+02 Score=30.03 Aligned_cols=25 Identities=28% Similarity=0.391 Sum_probs=20.5
Q ss_pred cHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 102 GLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 102 G~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|-.+.+.+||.+|+++|++|.+|=.
T Consensus 14 GKTT~~~nLA~~la~~G~kVLliD~ 38 (270)
T PRK13185 14 GKSTTSSNLSAAFAKLGKKVLQIGC 38 (270)
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEec
Confidence 4455678899999999999988853
No 430
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=21.74 E-value=8.3e+02 Score=24.58 Aligned_cols=91 Identities=11% Similarity=-0.062 Sum_probs=57.9
Q ss_pred CHHHHHHHHHhcccCCeEEEEEecCC------------hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEc
Q 007212 417 GSDILAAAIPHFIKENVQIIVLGTGK------------KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 484 (612)
Q Consensus 417 g~d~li~A~~~l~~~~~~lvivG~g~------------~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~p 484 (612)
.-+.+++.++.+++.+++++.-|.=+ .+-.+.+.+.+.+++-.+ ...-++...+..+...+|++=+|
T Consensus 27 s~e~~~~~a~~~~~~g~~~~r~g~~kpRts~~sf~G~G~~gl~~L~~~~~~~Gl~~-~Tev~d~~~v~~~~e~vdilqIg 105 (250)
T PRK13397 27 SYDHIRLAASSAKKLGYNYFRGGAYKPRTSAASFQGLGLQGIRYLHEVCQEFGLLS-VSEIMSERQLEEAYDYLDVIQVG 105 (250)
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccCCCCCCcccCCCCHHHHHHHHHHHHHcCCCE-EEeeCCHHHHHHHHhcCCEEEEC
Confidence 34556666666655578887777511 123456666666766322 23345666666667789999999
Q ss_pred CCCCCCcHHHHHHH-HcCCceEEcCC
Q 007212 485 SRFEPCGLIQLHAM-RYGTVPIVAST 509 (612)
Q Consensus 485 S~~E~~gl~~lEAm-a~G~PvI~s~~ 509 (612)
|+. ..-..++++. ..|+||+.+.-
T Consensus 106 s~~-~~n~~LL~~va~tgkPVilk~G 130 (250)
T PRK13397 106 ARN-MQNFEFLKTLSHIDKPILFKRG 130 (250)
T ss_pred ccc-ccCHHHHHHHHccCCeEEEeCC
Confidence 973 3335566666 56999998874
No 431
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=21.73 E-value=63 Score=34.48 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=18.8
Q ss_pred hhchHHHHHhCCCeEEEEEec
Q 007212 107 LGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 107 ~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+..|+++|+++||+|+++++.
T Consensus 12 ~l~lA~~L~~~Gh~V~~~~~~ 32 (392)
T TIGR01426 12 TLGVVEELVARGHRVTYATTE 32 (392)
T ss_pred cHHHHHHHHhCCCeEEEEeCH
Confidence 457999999999999999975
No 432
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=21.49 E-value=2.3e+02 Score=30.45 Aligned_cols=44 Identities=20% Similarity=0.312 Sum_probs=32.9
Q ss_pred HHHHHHhccEEE--EcCCCC----CC---cHHHHHHHHcCCceEEcCCCCccc
Q 007212 471 AHMIIAGADFIL--IPSRFE----PC---GLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~i~~~aDv~v--~pS~~E----~~---gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||+++ .|...+ .. +-..++.|.-|.-+|-+.-|++.|
T Consensus 161 L~ell~~sDiI~lh~PLt~~g~~~T~~li~~~~l~~mk~gailIN~aRG~vVD 213 (378)
T PRK15438 161 LDELVQEADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVD 213 (378)
T ss_pred HHHHHhhCCEEEEeCCCCCCcccccccccCHHHHhcCCCCcEEEECCCchhcC
Confidence 457899999998 565443 43 456889999999888888777665
No 433
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=21.49 E-value=64 Score=29.87 Aligned_cols=35 Identities=17% Similarity=0.310 Sum_probs=26.2
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
++.||++|+. |.+....++.|.+.|++|+||+|..
T Consensus 12 ~~~~vlVvGG-----------G~va~rka~~Ll~~ga~V~VIsp~~ 46 (157)
T PRK06719 12 HNKVVVIIGG-----------GKIAYRKASGLKDTGAFVTVVSPEI 46 (157)
T ss_pred CCCEEEEECC-----------CHHHHHHHHHHHhCCCEEEEEcCcc
Confidence 4567777652 3356788899999999999998763
No 434
>TIGR03010 sulf_tusC_dsrF sulfur relay protein TusC/DsrF. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=21.45 E-value=1.4e+02 Score=26.00 Aligned_cols=38 Identities=21% Similarity=0.079 Sum_probs=27.6
Q ss_pred eEEEEEecccCcccccc-HHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGG-LGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG-~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||+||... +|+ |. .+.-..+++-+++..+++|.|+-..
T Consensus 1 kil~i~~~-~Py---g~~~~~e~l~~al~~aa~~~eV~vff~~ 39 (116)
T TIGR03010 1 KLAFVFRQ-APH---GTASGREGLDALLAASAFDEDIGVFFID 39 (116)
T ss_pred CEEEEEcC-CCC---CcchHHHHHHHHHHHHhccCCeEEEEec
Confidence 58888876 676 33 3333445688888999999999876
No 435
>KOG2452 consensus Formyltetrahydrofolate dehydrogenase [Nucleotide transport and metabolism]
Probab=21.45 E-value=1.2e+02 Score=32.89 Aligned_cols=32 Identities=22% Similarity=0.332 Sum_probs=22.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++|+... =|.. .-..|.+.||+|.++..-
T Consensus 1 mkiaiigqs~------fg~~-----vy~~lrk~gheiv~vfti 32 (881)
T KOG2452|consen 1 MKIAVIGQSL------FGQE-----VYCHLRKEGHEVVGVFTV 32 (881)
T ss_pred CeeEEechhh------hhHH-----HHHHHHhcCceEEEEEEe
Confidence 8999998752 2333 345689999998777643
No 436
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=21.40 E-value=1e+02 Score=32.40 Aligned_cols=36 Identities=19% Similarity=0.083 Sum_probs=25.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|||++. ||.|..-..|++.|.++|++|+.+...
T Consensus 13 ~~~~~vlVt----------GatGfiG~~lv~~L~~~g~~V~~~d~~ 48 (348)
T PRK15181 13 LAPKRWLIT----------GVAGFIGSGLLEELLFLNQTVIGLDNF 48 (348)
T ss_pred ccCCEEEEE----------CCccHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345786664 445545567999999999999887643
No 437
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=21.40 E-value=1.7e+02 Score=26.35 Aligned_cols=28 Identities=29% Similarity=0.283 Sum_probs=22.4
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..|....+.+||..|++.|++|.++-..
T Consensus 11 g~G~t~~a~~lA~~la~~~~~Vllid~~ 38 (157)
T PF13614_consen 11 GVGKTTLALNLAAALARKGKKVLLIDFD 38 (157)
T ss_dssp TSSHHHHHHHHHHHHHHTTT-EEEEE--
T ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 5788889999999999999998888654
No 438
>PF05686 Glyco_transf_90: Glycosyl transferase family 90; InterPro: IPR006598 Cryptococcus neoformans is a pathogenic fungus which most commonly affects the central nervous system and causes fatal meningoencephalitis primarily in patients with AIDS. This fungus produces a thick extracellular polysaccharide capsule which is well recognised as a virulence factor. CAP10 is required for capsule formation and virulence [].
Probab=21.39 E-value=3.7e+02 Score=29.04 Aligned_cols=84 Identities=12% Similarity=0.102 Sum_probs=52.8
Q ss_pred HHHHHHHcCCceEEcCCC---CcccceecCcceEEecccccccccCCC-CCHHHHHHHHHHHHHhhCHHHHHHHHHHH--
Q 007212 493 IQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDP-VDVAAVSTTVRRALATYGTQALAEMMKNG-- 566 (612)
Q Consensus 493 ~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~~~~~~~~~~~~v~~-~d~~~la~~i~~ll~~~~~~~~~~~~~~~-- 566 (612)
.+---|+||-+|+..... -+.+.+......+-+ .. .|..+|.++|+.+.++ ++..+++++++
T Consensus 229 RlkylL~c~SvVl~~~~~~~e~f~~~L~P~vHYVPV----------~~~~d~sdL~~~v~w~~~~--~~~A~~IA~~g~~ 296 (395)
T PF05686_consen 229 RLKYLLACNSVVLKVKSPYYEFFYRALKPWVHYVPV----------KRDDDLSDLEEKVEWLNAH--DDEAQRIAENGQR 296 (395)
T ss_pred hHHHHHcCCceEEEeCCcHHHHHHhhhcccccEEEe----------ccccchhhHHHHhhhcccC--hHHHHHHHHHHHH
Confidence 344446777666654321 122233334444432 33 5789999999988877 56667777766
Q ss_pred -HHhhcCcHHHHHHHHHHHHHHH
Q 007212 567 -MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 567 -~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+.+.++.+.+..-|..++.+-.
T Consensus 297 f~~~~L~~~~~~~Y~~~LL~eYa 319 (395)
T PF05686_consen 297 FAREYLTMEDVYCYWRRLLLEYA 319 (395)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHH
Confidence 4688888888887777776544
No 439
>TIGR00658 orni_carb_tr ornithine carbamoyltransferase. Most OTCases are homotrimers, but the homotrimers are organized into dodecamers built from four trimers in at least two species; the catabolic OTCase of Pseudomonas aeruginosa is allosterically regulated, while OTCase of the extreme thermophile Pyrococcus furiosus shows both allostery and thermophily.
Probab=21.38 E-value=9.2e+02 Score=24.93 Aligned_cols=84 Identities=12% Similarity=0.079 Sum_probs=52.5
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC----hhHHHHHHHHHHHCCCceEEEe
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVA 464 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~ 464 (612)
-.+++.+|-- +...|.|+|-+ ..=...++.++..+ ++++.+++... +.+.+.+++.+.+.+.++...
T Consensus 137 ~Ti~e~~g~l---~g~~v~~vGd~--~~v~~Sl~~~l~~~---g~~v~~~~P~~~~~~~~~~~~~~~~~~~~g~~~~~~- 207 (304)
T TIGR00658 137 LTIIEHFGKL---KGVKVVYVGDG--NNVCNSLMLAGAKL---GMDVVVATPEGYEPDADIVKKAQEIAKENGGSVELT- 207 (304)
T ss_pred HHHHHHhCCC---CCcEEEEEeCC--CchHHHHHHHHHHc---CCEEEEECCchhcCCHHHHHHHHHHHHHcCCeEEEE-
Confidence 4455666642 23689999987 34567778888777 78999999643 233344444455544334322
Q ss_pred ccChHHHHHHHHhccEEEEcC
Q 007212 465 KFNIPLAHMIIAGADFILIPS 485 (612)
Q Consensus 465 ~~~~~~~~~i~~~aDv~v~pS 485 (612)
....+.+..||++....
T Consensus 208 ----~d~~~a~~~aDvvy~~~ 224 (304)
T TIGR00658 208 ----HDPVEAVKGADVIYTDV 224 (304)
T ss_pred ----cCHHHHhCCCCEEEEcC
Confidence 12235789999998865
No 440
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=21.31 E-value=1.3e+02 Score=31.01 Aligned_cols=34 Identities=21% Similarity=0.275 Sum_probs=24.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 6 ~k~vlVTGa------s~gIG---~~~a~~L~~~G~~V~~~~r~ 39 (322)
T PRK07453 6 KGTVIITGA------SSGVG---LYAAKALAKRGWHVIMACRN 39 (322)
T ss_pred CCEEEEEcC------CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 455555532 57777 56789999999999887643
No 441
>PRK08163 salicylate hydroxylase; Provisional
Probab=21.31 E-value=88 Score=33.29 Aligned_cols=33 Identities=33% Similarity=0.427 Sum_probs=24.9
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
++++|++|+.. .+|+ .+|.+|++.|++|+|+=.
T Consensus 3 ~~~~V~IvGaG------iaGl-----~~A~~L~~~g~~v~v~Er 35 (396)
T PRK08163 3 KVTPVLIVGGG------IGGL-----AAALALARQGIKVKLLEQ 35 (396)
T ss_pred CCCeEEEECCc------HHHH-----HHHHHHHhCCCcEEEEee
Confidence 46899999853 2454 467788999999998853
No 442
>PRK10569 NAD(P)H-dependent FMN reductase; Provisional
Probab=21.26 E-value=1.6e+02 Score=28.18 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=26.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++|+.. |. +.+=....+....+.+.+.|++|.++--.
T Consensus 1 mkIl~I~GS--pr-~~S~t~~l~~~~~~~l~~~g~ev~~idL~ 40 (191)
T PRK10569 1 MRVITLAGS--PR-FPSRSSALLEYAREWLNGLGVEVYHWNLQ 40 (191)
T ss_pred CEEEEEEcC--CC-CCChHHHHHHHHHHHHHhCCCEEEEEEcc
Confidence 899999875 42 22223334455566777789999988643
No 443
>PRK06196 oxidoreductase; Provisional
Probab=21.23 E-value=1.2e+02 Score=31.18 Aligned_cols=25 Identities=40% Similarity=0.436 Sum_probs=19.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++|++|.+++.+
T Consensus 35 sggIG---~~~a~~L~~~G~~Vv~~~R~ 59 (315)
T PRK06196 35 YSGLG---LETTRALAQAGAHVIVPARR 59 (315)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56788899999999877643
No 444
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=21.14 E-value=2.3e+02 Score=31.45 Aligned_cols=38 Identities=16% Similarity=0.162 Sum_probs=28.6
Q ss_pred CCCceEEEEEecccCccccccHH-HHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~-~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+++||++.. +||.+ ....+|.+.|.+.|++|.|+...
T Consensus 68 l~~k~IllgV--------tGsIAayka~~lvr~L~k~G~~V~VvmT~ 106 (475)
T PRK13982 68 LASKRVTLII--------GGGIAAYKALDLIRRLKERGAHVRCVLTK 106 (475)
T ss_pred cCCCEEEEEE--------ccHHHHHHHHHHHHHHHhCcCEEEEEECc
Confidence 4467887776 34444 35667999999999999999765
No 445
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=21.12 E-value=1e+02 Score=31.74 Aligned_cols=32 Identities=28% Similarity=0.468 Sum_probs=24.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||.||+ +|.+=..++..|.++||+|+|+-..
T Consensus 1 ~kIafIG-----------LG~MG~pmA~~L~~aG~~v~v~~r~ 32 (286)
T COG2084 1 MKIAFIG-----------LGIMGSPMAANLLKAGHEVTVYNRT 32 (286)
T ss_pred CeEEEEc-----------CchhhHHHHHHHHHCCCEEEEEeCC
Confidence 5777776 3444467999999999999998754
No 446
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=21.10 E-value=8.5e+02 Score=24.47 Aligned_cols=157 Identities=19% Similarity=0.201 Sum_probs=75.0
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhh---ccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMD---AKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK 430 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~ 430 (612)
++-|-....|+|...+||...-+.--+.+ .-+..+.++.---.... +.-.|+|+|. ...+.+.+.+++...-.
T Consensus 14 vHfGhqtr~wnpkm~~fIf~~RngihIIDL~kT~~~l~~A~~~v~~~~~--~~g~ILfVgT--K~~a~~~V~~~A~r~g~ 89 (252)
T COG0052 14 VHFGHQTRRWNPKMKPFIFGERNGIHIIDLQKTLERLREAYKFLRRIAA--NGGKILFVGT--KKQAQEPVKEFAERTGA 89 (252)
T ss_pred ccccccccccCCcccccceeecCCcEEEEHHHHHHHHHHHHHHHHHHHc--CCCEEEEEec--hHHHHHHHHHHHHHhCC
Confidence 56777888899988888877665333221 11222222211111121 1247888885 34455566666655533
Q ss_pred CCeEEEEEecCC---hhHHHHHHHH---HHHCCCceEEEeccChHHHHH-------HHH-------hccEEEEcC-CCCC
Q 007212 431 ENVQIIVLGTGK---KPMEKQLEQL---EILYPEKARGVAKFNIPLAHM-------IIA-------GADFILIPS-RFEP 489 (612)
Q Consensus 431 ~~~~lvivG~g~---~~~~~~l~~l---~~~~~~~v~~~~~~~~~~~~~-------i~~-------~aDv~v~pS-~~E~ 489 (612)
.-+.=.++|.-= +.....++.+ .....+.+..+.+-..-.+.. .+. .=|++++.- ..|
T Consensus 90 ~yV~~RwLgG~LTN~~ti~~si~rl~~lE~~~~~~~~~~tKkE~l~l~re~~kL~k~lgGIk~m~~~Pd~l~ViDp~~e- 168 (252)
T COG0052 90 YYVNGRWLGGMLTNFKTIRKSIKRLKELEKMEEDGFDGLTKKEALMLTRELEKLEKSLGGIKDMKGLPDVLFVIDPRKE- 168 (252)
T ss_pred ceecCcccCccccCchhHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHHHhhcchhhccCCCCEEEEeCCcHh-
Confidence 323333455321 1222333333 322222222222211111111 111 145655432 223
Q ss_pred CcHHHHHHHHcCCceEEc-CCCCcccce
Q 007212 490 CGLIQLHAMRYGTVPIVA-STGGLVDTV 516 (612)
Q Consensus 490 ~gl~~lEAma~G~PvI~s-~~gg~~e~v 516 (612)
-+.+.||--.|.|||+- |+-.-++.|
T Consensus 169 -~iAv~EA~klgIPVvAlvDTn~dpd~V 195 (252)
T COG0052 169 -KIAVKEANKLGIPVVALVDTNCDPDGV 195 (252)
T ss_pred -HHHHHHHHHcCCCEEEEecCCCCCccC
Confidence 46799999999999975 555555554
No 447
>PRK07856 short chain dehydrogenase; Provisional
Probab=20.95 E-value=1.3e+02 Score=29.60 Aligned_cols=25 Identities=36% Similarity=0.613 Sum_probs=19.5
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 15 s~gIG---~~la~~l~~~g~~v~~~~r~ 39 (252)
T PRK07856 15 TRGIG---AGIARAFLAAGATVVVCGRR 39 (252)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46666 67888899999999877654
No 448
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=20.85 E-value=3.6e+02 Score=25.83 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=22.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCC--eEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh--~V~vit~~ 127 (612)
|||+++.+ |-+..+..+..++.+.++ +|.++.+.
T Consensus 1 ~riail~s---------g~gs~~~~ll~~~~~~~l~~~I~~vi~~ 36 (190)
T TIGR00639 1 KRIVVLIS---------GNGSNLQAIIDACKEGKIPASVVLVISN 36 (190)
T ss_pred CeEEEEEc---------CCChhHHHHHHHHHcCCCCceEEEEEEC
Confidence 68888874 223466788888888776 55554444
No 449
>PRK08263 short chain dehydrogenase; Provisional
Probab=20.84 E-value=1.3e+02 Score=30.15 Aligned_cols=25 Identities=28% Similarity=0.432 Sum_probs=19.3
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++||+|.++...
T Consensus 12 sg~iG---~~~a~~l~~~g~~V~~~~r~ 36 (275)
T PRK08263 12 SRGFG---RAWTEAALERGDRVVATARD 36 (275)
T ss_pred CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 46776 56888899999998877643
No 450
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=20.83 E-value=1.2e+02 Score=29.48 Aligned_cols=30 Identities=27% Similarity=0.545 Sum_probs=21.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vi 124 (612)
++|++++. +||+| ..+++.|+++||+|.++
T Consensus 6 ~~ilI~Ga-------sg~iG---~~la~~l~~~g~~v~~~ 35 (247)
T PRK05565 6 KVAIVTGA-------SGGIG---RAIAELLAKEGAKVVIA 35 (247)
T ss_pred CEEEEeCC-------CcHHH---HHHHHHHHHCCCEEEEE
Confidence 45655543 36665 67888899999999877
No 451
>PRK06487 glycerate dehydrogenase; Provisional
Probab=20.63 E-value=3.3e+02 Score=28.39 Aligned_cols=44 Identities=25% Similarity=0.357 Sum_probs=33.1
Q ss_pred HHHHHHhccEEEEc--CCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007212 471 AHMIIAGADFILIP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~i~~~aDv~v~p--S~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++- ..-|. ++-..+..|--|.-+|-+.-|++.+
T Consensus 191 l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~mk~ga~lIN~aRG~vVd 239 (317)
T PRK06487 191 LDELLPQVDALTLHCPLTEHTRHLIGARELALMKPGALLINTARGGLVD 239 (317)
T ss_pred HHHHHHhCCEEEECCCCChHHhcCcCHHHHhcCCCCeEEEECCCccccC
Confidence 56789999998863 33344 5667999999898888888777665
No 452
>PRK09620 hypothetical protein; Provisional
Probab=20.61 E-value=1.4e+02 Score=29.47 Aligned_cols=20 Identities=15% Similarity=0.189 Sum_probs=17.4
Q ss_pred hchHHHHHhCCCeEEEEEec
Q 007212 108 GGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 108 ~~L~~~L~~~Gh~V~vit~~ 127 (612)
..||++|.++|++|+++...
T Consensus 33 s~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 33 RIIAEELISKGAHVIYLHGY 52 (229)
T ss_pred HHHHHHHHHCCCeEEEEeCC
Confidence 67999999999999999743
No 453
>PF09198 T4-Gluco-transf: Bacteriophage T4 beta-glucosyltransferase; InterPro: IPR015281 Members of this family are DNA-modifying enzymes encoded by bacteriophage T4 that transfer glucose from uridine diphosphoglucose to 5-hydroxymethyl cytosine bases of phage T4 DNA []. ; PDB: 1J39_A 1SXQ_B 1NZF_A 1M5R_B 1JEJ_A 1JIV_A 1NZD_A 1NVK_A 2BGU_A 1JIU_A ....
Probab=20.53 E-value=2.7e+02 Score=18.63 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=19.3
Q ss_pred ceEEEEEec--ccCccccccHHHHhhchHHHHHhCCCeEE
Q 007212 85 LNILFVGTE--VAPWSKTGGLGDVLGGLPPALAANGHRVM 122 (612)
Q Consensus 85 MkIl~v~~~--~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~ 122 (612)
|||++++-. .-.+ ++- -+.-+-.|.+.+.+.|.+|.
T Consensus 1 mkiai~n~gnni~~f-kt~-p~setiyl~~~~~~mgl~vd 38 (38)
T PF09198_consen 1 MKIAIINMGNNIQNF-KTT-PSSETIYLFKCISDMGLNVD 38 (38)
T ss_dssp -EEEEEESSS--SSS-SSH-HHHHHHHHHHHHHTTT-EEE
T ss_pred CeEEEEecCCceece-eec-CccceEeHHHHHHHhCCCCC
Confidence 788888742 1111 111 12234568888999998874
No 454
>PRK08219 short chain dehydrogenase; Provisional
Probab=20.44 E-value=1.2e+02 Score=29.11 Aligned_cols=24 Identities=21% Similarity=0.421 Sum_probs=17.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|++| ..+++.|.++ |+|.++...
T Consensus 12 ~g~iG---~~l~~~l~~~-~~V~~~~r~ 35 (227)
T PRK08219 12 SRGIG---AAIARELAPT-HTLLLGGRP 35 (227)
T ss_pred CcHHH---HHHHHHHHhh-CCEEEEeCC
Confidence 46666 5678888888 999888754
No 455
>PRK08226 short chain dehydrogenase; Provisional
Probab=20.34 E-value=1.3e+02 Score=29.74 Aligned_cols=25 Identities=20% Similarity=0.476 Sum_probs=19.2
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 15 s~giG---~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 15 LQGIG---EGIARVFARHGANLILLDIS 39 (263)
T ss_pred CChHH---HHHHHHHHHCCCEEEEecCC
Confidence 46666 56888899999998777643
No 456
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=20.31 E-value=1.3e+02 Score=29.62 Aligned_cols=25 Identities=24% Similarity=0.452 Sum_probs=19.5
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 16 s~gIG---~~~a~~l~~~G~~v~~~~~~ 40 (255)
T PRK06463 16 TRGIG---RAIAEAFLREGAKVAVLYNS 40 (255)
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46777 56889999999999876543
No 457
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=20.30 E-value=1.3e+02 Score=29.38 Aligned_cols=35 Identities=31% Similarity=0.491 Sum_probs=26.1
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+|+++|+.. .+|+| ..+++.|+++|+.|.++..+
T Consensus 4 ~~~~ilITGa------s~GiG---~aia~~l~~~G~~v~~~~~~ 38 (251)
T COG1028 4 SGKVALVTGA------SSGIG---RAIARALAREGARVVVAARR 38 (251)
T ss_pred CCCEEEEeCC------CCHHH---HHHHHHHHHCCCeEEEEcCC
Confidence 4566666643 45776 67889999999999888766
No 458
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=20.30 E-value=1.1e+02 Score=31.76 Aligned_cols=32 Identities=34% Similarity=0.665 Sum_probs=24.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++ .|++|.+ ++-.|++.||+|+++...
T Consensus 1 mkI~IlG--------aGAvG~l---~g~~L~~~g~~V~~~~R~ 32 (307)
T COG1893 1 MKILILG--------AGAIGSL---LGARLAKAGHDVTLLVRS 32 (307)
T ss_pred CeEEEEC--------CcHHHHH---HHHHHHhCCCeEEEEecH
Confidence 8999998 3777744 455599999888887654
No 459
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=20.21 E-value=1.8e+02 Score=29.79 Aligned_cols=32 Identities=25% Similarity=0.342 Sum_probs=19.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||||+++. .|++-..|++.|. .+++|..++..
T Consensus 1 M~iLi~G~----------~GqLG~~L~~~l~-~~~~v~a~~~~ 32 (281)
T COG1091 1 MKILITGA----------NGQLGTELRRALP-GEFEVIATDRA 32 (281)
T ss_pred CcEEEEcC----------CChHHHHHHHHhC-CCceEEeccCc
Confidence 67666653 3444466777676 55777766544
No 460
>PLN02427 UDP-apiose/xylose synthase
Probab=20.20 E-value=1.1e+02 Score=32.64 Aligned_cols=34 Identities=24% Similarity=0.298 Sum_probs=23.8
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhC-CCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vit~ 126 (612)
++|||++.+ |.|..=..|++.|.++ ||+|.++..
T Consensus 13 ~~~~VlVTG----------gtGfIGs~lv~~L~~~~g~~V~~l~r 47 (386)
T PLN02427 13 KPLTICMIG----------AGGFIGSHLCEKLMTETPHKVLALDV 47 (386)
T ss_pred cCcEEEEEC----------CcchHHHHHHHHHHhcCCCEEEEEec
Confidence 358877654 4443446789999998 599988763
No 461
>PRK09004 FMN-binding protein MioC; Provisional
Probab=20.18 E-value=1.4e+02 Score=27.24 Aligned_cols=26 Identities=27% Similarity=0.308 Sum_probs=23.1
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
+|-.+.+...|+..+.++|++|.++.
T Consensus 12 tGnae~~A~~l~~~~~~~g~~~~~~~ 37 (146)
T PRK09004 12 LGGAEYVADHLAEKLEEAGFSTETLH 37 (146)
T ss_pred chHHHHHHHHHHHHHHHcCCceEEec
Confidence 78888899999999999999998864
No 462
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=20.10 E-value=4.2e+02 Score=27.67 Aligned_cols=98 Identities=16% Similarity=0.162 Sum_probs=53.3
Q ss_pred HHHHHHHHhcccCCeE-E-EEEecCC---hhHHHHHHHHHHHCCCceEEEeccChHH----HHHHHHhccEEEEcCCC-C
Q 007212 419 DILAAAIPHFIKENVQ-I-IVLGTGK---KPMEKQLEQLEILYPEKARGVAKFNIPL----AHMIIAGADFILIPSRF-E 488 (612)
Q Consensus 419 d~li~A~~~l~~~~~~-l-vivG~g~---~~~~~~l~~l~~~~~~~v~~~~~~~~~~----~~~i~~~aDv~v~pS~~-E 488 (612)
+.-+++++++. |+++ + ++...+. ....+.++..+.+.+-.+....--+..+ ...+....|++..|... .
T Consensus 146 ~q~i~lik~~~-Pnak~Igv~Y~p~E~ns~~l~eelk~~A~~~Gl~vve~~v~~~ndi~~a~~~l~g~~d~i~~p~dn~i 224 (322)
T COG2984 146 AQQIELIKALL-PNAKSIGVLYNPGEANSVSLVEELKKEARKAGLEVVEAAVTSVNDIPRAVQALLGKVDVIYIPTDNLI 224 (322)
T ss_pred HHHHHHHHHhC-CCCeeEEEEeCCCCcccHHHHHHHHHHHHHCCCEEEEEecCcccccHHHHHHhcCCCcEEEEecchHH
Confidence 34444444442 4433 2 3444443 2344455555555553333222211111 22345788998888764 2
Q ss_pred --CCcHHHHHHHHcCCceEEcCCCCcccceecCcc
Q 007212 489 --PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT 521 (612)
Q Consensus 489 --~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~ 521 (612)
++...+.+|...++|++++++ +.|++|..
T Consensus 225 ~s~~~~l~~~a~~~kiPli~sd~----~~V~~Ga~ 255 (322)
T COG2984 225 VSAIESLLQVANKAKIPLIASDT----SSVKEGAL 255 (322)
T ss_pred HHHHHHHHHHHHHhCCCeecCCH----HHHhcCcc
Confidence 455568899999999999995 44555543
No 463
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.08 E-value=3.9e+02 Score=26.84 Aligned_cols=72 Identities=18% Similarity=0.211 Sum_probs=44.7
Q ss_pred HHHHhccEEEEcC-CCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 473 MIIAGADFILIPS-RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 473 ~i~~~aDv~v~pS-~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
.-++.||++|.-. .+|++=-.+++.+ .+.+++....++..+--. ..--+ ..+|.+...+++.|.+.|
T Consensus 48 ~~l~~ADliv~~G~~lE~~~~k~~~~~-~~~~v~~~~~~~~~~~~~-~dPH~----------Wldp~n~~~~a~~I~~~L 115 (264)
T cd01020 48 AKVSTADIVVYNGGGYDPWMTKLLADT-KDVIVIAADLDGHDDKEG-DNPHL----------WYDPETMSKVANALADAL 115 (264)
T ss_pred HHHhhCCEEEEeCCCchHHHHHHHHhc-CCceEEeeecccccCCCC-CCCce----------ecCHhHHHHHHHHHHHHH
Confidence 4688999998765 3576656666655 455666554443211000 01112 348999999999999999
Q ss_pred HhhCH
Q 007212 552 ATYGT 556 (612)
Q Consensus 552 ~~~~~ 556 (612)
..-.+
T Consensus 116 ~~~dP 120 (264)
T cd01020 116 VKADP 120 (264)
T ss_pred HHhCc
Confidence 86434
No 464
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=20.04 E-value=1.2e+02 Score=32.67 Aligned_cols=36 Identities=28% Similarity=0.303 Sum_probs=26.5
Q ss_pred CceEEEEEecccCccccccHHH--HhhchHHHHHhCCCeEEEEE
Q 007212 84 GLNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~--~~~~L~~~L~~~Gh~V~vit 125 (612)
+++|+-|... .||+|. .+.+|+.+|+.+|++|.+|=
T Consensus 105 ~~~vIai~n~------KGGVGKTT~a~nLA~~LA~~G~rVLlID 142 (388)
T PRK13705 105 FPPVIGVAAH------KGGVYKTSVSVHLAQDLALKGLRVLLVE 142 (388)
T ss_pred CCeEEEEECC------CCCchHHHHHHHHHHHHHhcCCCeEEEc
Confidence 4666655543 566665 56789999999999998883
No 465
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=20.00 E-value=4.4e+02 Score=26.52 Aligned_cols=103 Identities=15% Similarity=0.197 Sum_probs=66.4
Q ss_pred EEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCC----hhHHHHHHHHHHHCCCceEEEe--ccChHHHHHHHHh
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVA--KFNIPLAHMIIAG 477 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~--~~~~~~~~~i~~~ 477 (612)
.++|+|-+.-.-|...+-+-++.+++ -++.|+|+.... ..+.+.+-+.-.+.+-.+.-.+ .|+..++..++..
T Consensus 2 riLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~G~dviT~GNH~wd~~ei~~~i~~ 81 (266)
T COG1692 2 RILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEAGADVITLGNHTWDQKEILDFIDN 81 (266)
T ss_pred eEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHhCCCEEecccccccchHHHHHhhc
Confidence 58999999999999999999999976 478889987521 1222222222233443344333 3467777789999
Q ss_pred ccEEEEcCCC-CC---CcHHHHHHHHcCCceEEcCC
Q 007212 478 ADFILIPSRF-EP---CGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 478 aDv~v~pS~~-E~---~gl~~lEAma~G~PvI~s~~ 509 (612)
.+.+|-|..+ ++ .|..+++ ..|.-+.+++.
T Consensus 82 ~~~ilRP~N~p~~~~G~G~~~f~--~ng~ki~V~Nl 115 (266)
T COG1692 82 ADRILRPANYPDGTPGKGSRIFK--INGKKLAVINL 115 (266)
T ss_pred ccceeccCCCCCCCCcceEEEEE--eCCcEEEEEEe
Confidence 9999999986 33 3444444 44554444443
Done!