Query 007212
Match_columns 612
No_of_seqs 268 out of 3348
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 20:02:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007212.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007212hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 100.0 2.9E-83 9.9E-88 712.7 50.1 529 83-612 8-536 (536)
2 2qzs_A Glycogen synthase; glyc 100.0 4.2E-49 1.4E-53 433.3 45.9 461 85-590 1-479 (485)
3 1rzu_A Glycogen synthase 1; gl 100.0 1.3E-49 4.5E-54 437.3 41.8 463 85-591 1-479 (485)
4 3fro_A GLGA glycogen synthase; 100.0 6E-47 2E-51 408.6 41.7 424 83-590 1-433 (439)
5 3c48_A Predicted glycosyltrans 100.0 3E-41 1E-45 365.2 40.8 407 72-594 8-432 (438)
6 2r60_A Glycosyl transferase, g 100.0 5.1E-40 1.7E-44 362.5 39.4 413 84-595 7-467 (499)
7 3okp_A GDP-mannose-dependent a 100.0 2.1E-40 7E-45 352.6 34.9 369 82-593 2-385 (394)
8 3s28_A Sucrose synthase 1; gly 100.0 2.1E-39 7.3E-44 372.1 29.2 428 83-588 277-770 (816)
9 2jjm_A Glycosyl transferase, g 100.0 2.1E-38 7.1E-43 338.6 33.9 371 84-591 13-389 (394)
10 2x6q_A Trehalose-synthase TRET 100.0 4.2E-37 1.4E-41 330.8 35.0 364 81-588 37-415 (416)
11 2gek_A Phosphatidylinositol ma 100.0 1.1E-37 3.6E-42 333.2 28.1 365 82-592 18-388 (406)
12 2iw1_A Lipopolysaccharide core 100.0 4.7E-38 1.6E-42 332.2 22.6 362 85-588 1-372 (374)
13 3oy2_A Glycosyltransferase B73 100.0 4.1E-37 1.4E-41 330.4 28.2 232 312-591 126-394 (413)
14 2iuy_A Avigt4, glycosyltransfe 100.0 2.3E-37 8E-42 324.0 25.6 316 82-591 1-339 (342)
15 3nb0_A Glycogen [starch] synth 100.0 7.7E-36 2.6E-40 328.5 28.3 441 90-590 33-636 (725)
16 2x0d_A WSAF; GT4 family, trans 100.0 1.2E-32 4E-37 296.8 15.9 357 82-588 44-410 (413)
17 2hy7_A Glucuronosyltransferase 100.0 7.5E-30 2.6E-34 274.4 20.3 202 309-589 170-381 (406)
18 1f0k_A MURG, UDP-N-acetylgluco 100.0 6.2E-29 2.1E-33 261.9 25.4 339 84-588 6-358 (364)
19 1l5w_A Maltodextrin phosphoryl 100.0 3.2E-28 1.1E-32 272.0 27.0 367 201-589 273-732 (796)
20 2c4m_A Glycogen phosphorylase; 100.0 2.5E-28 8.5E-33 272.9 25.6 473 99-589 112-721 (796)
21 1uqt_A Alpha, alpha-trehalose- 100.0 6.6E-27 2.2E-31 255.8 28.4 295 228-587 123-454 (482)
22 2vsy_A XCC0866; transferase, g 100.0 3.6E-27 1.2E-31 263.9 24.4 215 317-595 328-567 (568)
23 3beo_A UDP-N-acetylglucosamine 99.9 1E-26 3.4E-31 245.8 24.0 223 311-585 143-374 (375)
24 1vgv_A UDP-N-acetylglucosamine 99.9 1.2E-26 4.2E-31 246.1 22.0 231 315-589 139-378 (384)
25 2bfw_A GLGA glycogen synthase; 99.9 2E-25 6.8E-30 215.0 21.2 184 353-567 1-193 (200)
26 3t5t_A Putative glycosyltransf 99.9 1.3E-24 4.4E-29 235.7 27.6 294 230-590 151-476 (496)
27 2gj4_A Glycogen phosphorylase, 99.9 2.6E-25 8.9E-30 249.4 20.8 342 228-589 320-756 (824)
28 3qhp_A Type 1 capsular polysac 99.9 2.8E-24 9.7E-29 200.7 18.6 159 404-579 3-166 (166)
29 1v4v_A UDP-N-acetylglucosamine 99.9 7.3E-22 2.5E-26 209.0 29.6 219 314-589 143-366 (376)
30 2f9f_A First mannosyl transfer 99.9 6.1E-21 2.1E-25 180.6 17.3 141 402-555 22-164 (177)
31 3rhz_A GTF3, nucleotide sugar 99.8 1.5E-18 5.2E-23 181.2 27.6 245 227-579 73-328 (339)
32 2xci_A KDO-transferase, 3-deox 99.8 3E-19 1E-23 189.6 21.8 196 310-566 146-356 (374)
33 3ot5_A UDP-N-acetylglucosamine 99.8 1.2E-17 4.2E-22 178.9 25.4 225 312-589 163-393 (403)
34 3otg_A CALG1; calicheamicin, T 99.8 2E-18 6.8E-23 184.7 18.9 160 402-586 242-409 (412)
35 3dzc_A UDP-N-acetylglucosamine 99.8 1.1E-17 3.8E-22 178.8 24.4 229 311-585 159-395 (396)
36 3s2u_A UDP-N-acetylglucosamine 99.7 5.6E-15 1.9E-19 156.1 27.1 160 404-584 182-355 (365)
37 2iyf_A OLED, oleandomycin glyc 99.7 4.6E-15 1.6E-19 159.7 22.7 161 402-588 232-402 (430)
38 4fzr_A SSFS6; structural genom 99.7 1.3E-15 4.4E-20 162.4 16.9 153 402-582 227-397 (398)
39 3tsa_A SPNG, NDP-rhamnosyltran 99.6 1.4E-14 4.7E-19 153.8 17.4 158 403-585 219-388 (391)
40 3ia7_A CALG4; glycosysltransfe 99.6 3.1E-13 1.1E-17 143.5 25.6 157 402-586 231-399 (402)
41 3oti_A CALG3; calicheamicin, T 99.6 1.1E-13 3.8E-18 147.4 20.3 153 403-584 233-396 (398)
42 3rsc_A CALG2; TDP, enediyne, s 99.5 4.3E-12 1.5E-16 135.6 23.6 157 402-586 247-414 (415)
43 2p6p_A Glycosyl transferase; X 99.5 1.2E-11 4.2E-16 130.7 25.5 153 403-584 211-378 (384)
44 4hwg_A UDP-N-acetylglucosamine 99.4 2.4E-12 8.1E-17 136.8 17.9 194 312-553 140-342 (385)
45 2yjn_A ERYCIII, glycosyltransf 99.2 1.3E-10 4.5E-15 125.4 17.8 155 403-585 268-435 (441)
46 2iya_A OLEI, oleandomycin glyc 99.2 3.6E-09 1.2E-13 113.3 26.5 158 402-585 255-421 (424)
47 1ygp_A Yeast glycogen phosphor 99.1 1.1E-08 3.9E-13 114.5 27.8 292 229-527 360-761 (879)
48 4amg_A Snogd; transferase, pol 99.1 3.9E-10 1.3E-14 119.5 11.9 153 403-582 238-397 (400)
49 3h4t_A Glycosyltransferase GTF 99.0 1.7E-08 5.8E-13 107.6 21.4 125 403-552 222-351 (404)
50 3q3e_A HMW1C-like glycosyltran 98.9 1.7E-08 5.7E-13 111.3 15.2 179 393-589 431-625 (631)
51 2o6l_A UDP-glucuronosyltransfe 98.8 3.4E-08 1.2E-12 91.8 12.0 122 403-553 22-154 (170)
52 1rrv_A Glycosyltransferase GTF 98.7 9.4E-07 3.2E-11 94.3 22.2 155 403-589 238-401 (416)
53 1iir_A Glycosyltransferase GTF 98.1 1.1E-05 3.6E-10 86.0 12.4 155 403-590 239-401 (415)
54 1psw_A ADP-heptose LPS heptosy 97.8 0.0022 7.4E-08 66.1 22.4 112 388-507 167-286 (348)
55 4gyw_A UDP-N-acetylglucosamine 97.6 0.0023 8E-08 72.9 20.1 182 392-590 514-708 (723)
56 3tov_A Glycosyl transferase fa 97.4 0.0043 1.5E-07 64.3 17.5 111 390-508 174-287 (349)
57 3hbm_A UDP-sugar hydrolase; PS 95.4 0.084 2.9E-06 52.8 10.9 94 404-509 159-252 (282)
58 3hbf_A Flavonoid 3-O-glucosylt 95.0 0.16 5.5E-06 54.4 12.5 135 403-553 274-414 (454)
59 2c1x_A UDP-glucose flavonoid 3 94.6 0.15 5.1E-06 54.7 10.9 132 403-553 272-412 (456)
60 2pq6_A UDP-glucuronosyl/UDP-gl 93.5 0.77 2.6E-05 49.3 13.9 133 403-553 296-439 (482)
61 3l7i_A Teichoic acid biosynthe 93.3 0.58 2E-05 53.1 13.2 230 314-587 475-717 (729)
62 2vch_A Hydroquinone glucosyltr 92.5 1.7 5.6E-05 46.7 14.7 140 403-553 269-429 (480)
63 2acv_A Triterpene UDP-glucosyl 91.1 2.2 7.6E-05 45.5 13.7 137 403-552 277-424 (463)
64 2gt1_A Lipopolysaccharide hept 89.3 1.8 6.3E-05 43.4 10.8 97 404-507 180-278 (326)
65 2jzc_A UDP-N-acetylglucosamine 85.3 0.82 2.8E-05 43.9 4.9 37 470-510 124-161 (224)
66 1iir_A Glycosyltransferase GTF 79.7 1.3 4.5E-05 46.2 4.4 37 85-127 1-37 (415)
67 4b4o_A Epimerase family protei 75.5 1.7 5.8E-05 43.0 3.6 33 85-127 1-33 (298)
68 4gi5_A Quinone reductase; prot 75.2 3 0.0001 41.3 5.2 42 80-125 18-60 (280)
69 3e8x_A Putative NAD-dependent 73.9 2.3 7.8E-05 40.4 3.9 40 78-127 15-54 (236)
70 2d1p_A TUSD, hypothetical UPF0 72.3 5.1 0.00017 35.2 5.4 41 84-127 12-53 (140)
71 1hdo_A Biliverdin IX beta redu 72.1 3.2 0.00011 38.0 4.3 35 83-127 2-36 (206)
72 2hy5_A Putative sulfurtransfer 72.0 5 0.00017 34.6 5.3 40 85-127 1-41 (130)
73 2pq6_A UDP-glucuronosyl/UDP-gl 69.8 3.8 0.00013 43.8 4.8 41 82-128 6-46 (482)
74 3ty2_A 5'-nucleotidase SURE; s 67.5 3.6 0.00012 40.2 3.6 40 83-130 10-49 (261)
75 3ew7_A LMO0794 protein; Q8Y8U8 66.3 4.1 0.00014 37.8 3.8 33 85-127 1-33 (221)
76 2pzm_A Putative nucleotide sug 65.6 3.8 0.00013 41.1 3.6 43 75-127 11-53 (330)
77 3h2s_A Putative NADH-flavin re 65.3 4.4 0.00015 37.8 3.8 33 85-127 1-33 (224)
78 3grc_A Sensor protein, kinase; 65.1 58 0.002 26.9 11.8 109 432-553 6-127 (140)
79 2zay_A Response regulator rece 62.4 51 0.0018 27.6 10.1 109 432-553 8-128 (147)
80 3gpi_A NAD-dependent epimerase 59.7 6.8 0.00023 38.1 4.1 35 82-127 1-35 (286)
81 3dqp_A Oxidoreductase YLBE; al 59.4 5.4 0.00018 37.2 3.2 33 85-127 1-33 (219)
82 3qvo_A NMRA family protein; st 59.3 4.7 0.00016 38.2 2.8 25 100-127 32-57 (236)
83 2vch_A Hydroquinone glucosyltr 59.1 6.3 0.00022 42.1 4.0 40 83-128 5-45 (480)
84 3of5_A Dethiobiotin synthetase 58.4 12 0.0004 35.7 5.4 40 83-126 2-41 (228)
85 1lss_A TRK system potassium up 57.8 9.1 0.00031 32.4 4.2 34 83-127 3-36 (140)
86 3mc3_A DSRE/DSRF-like family p 57.3 15 0.00053 31.6 5.6 43 83-128 14-56 (134)
87 1rcu_A Conserved hypothetical 56.6 39 0.0013 31.2 8.5 128 416-549 42-191 (195)
88 2a5l_A Trp repressor binding p 56.5 12 0.00041 34.2 5.0 39 84-127 5-43 (200)
89 2z1m_A GDP-D-mannose dehydrata 56.3 6.7 0.00023 39.1 3.5 36 82-127 1-36 (345)
90 3d7l_A LIN1944 protein; APC893 56.0 7.4 0.00025 35.6 3.5 34 83-127 2-35 (202)
91 3jte_A Response regulator rece 55.2 89 0.003 25.8 12.4 108 433-553 4-123 (143)
92 1wcv_1 SOJ, segregation protei 54.9 10 0.00035 36.5 4.4 39 83-127 4-44 (257)
93 3fgn_A Dethiobiotin synthetase 54.7 17 0.00057 35.2 5.9 43 80-126 21-63 (251)
94 1jx7_A Hypothetical protein YC 54.6 13 0.00045 30.7 4.5 40 85-127 2-43 (117)
95 2q1w_A Putative nucleotide sug 54.6 8.4 0.00029 38.5 3.9 41 77-127 14-54 (333)
96 3i6i_A Putative leucoanthocyan 53.8 8.3 0.00028 38.8 3.7 36 82-127 8-43 (346)
97 2hy5_B Intracellular sulfur ox 53.7 13 0.00043 32.4 4.4 41 84-127 4-45 (136)
98 3cg4_A Response regulator rece 53.5 94 0.0032 25.6 11.3 110 431-553 6-127 (142)
99 3hly_A Flavodoxin-like domain; 53.4 13 0.00045 33.0 4.6 38 85-127 1-38 (161)
100 2x4g_A Nucleoside-diphosphate- 53.1 10 0.00034 37.8 4.2 34 84-127 13-46 (342)
101 2b69_A UDP-glucuronate decarbo 52.2 9.6 0.00033 38.2 3.9 38 80-127 23-60 (343)
102 4f3y_A DHPR, dihydrodipicolina 51.9 16 0.00056 35.8 5.3 44 471-514 67-110 (272)
103 3kht_A Response regulator; PSI 51.6 1E+02 0.0035 25.5 12.6 111 432-553 5-128 (144)
104 4egb_A DTDP-glucose 4,6-dehydr 51.3 7.1 0.00024 39.1 2.7 40 76-125 16-55 (346)
105 3enk_A UDP-glucose 4-epimerase 51.3 11 0.00036 37.7 4.0 35 83-127 4-38 (341)
106 3m2p_A UDP-N-acetylglucosamine 51.0 11 0.00036 37.3 3.9 34 84-127 2-35 (311)
107 3ruf_A WBGU; rossmann fold, UD 50.9 8.5 0.00029 38.6 3.2 36 82-127 23-58 (351)
108 3hzh_A Chemotaxis response reg 50.7 1.2E+02 0.0039 25.8 10.7 108 433-552 37-156 (157)
109 2e6c_A 5'-nucleotidase SURE; S 50.6 10 0.00035 36.6 3.5 38 85-130 1-38 (244)
110 4id9_A Short-chain dehydrogena 50.3 9.2 0.00031 38.3 3.3 37 81-127 16-52 (347)
111 3ghy_A Ketopantoate reductase 50.3 10 0.00035 38.2 3.7 35 82-127 1-35 (335)
112 3gt7_A Sensor protein; structu 50.1 1.1E+02 0.0039 25.8 10.3 109 432-553 7-127 (154)
113 2ydy_A Methionine adenosyltran 49.8 9.4 0.00032 37.6 3.3 33 84-126 2-34 (315)
114 1e6u_A GDP-fucose synthetase; 49.7 7 0.00024 38.7 2.3 34 82-125 1-34 (321)
115 2hun_A 336AA long hypothetical 49.6 9.2 0.00031 38.1 3.2 35 82-126 1-37 (336)
116 4huj_A Uncharacterized protein 49.5 10 0.00035 35.7 3.3 37 80-127 19-55 (220)
117 3f6r_A Flavodoxin; FMN binding 49.4 18 0.00063 31.2 4.8 38 85-127 2-39 (148)
118 2phj_A 5'-nucleotidase SURE; S 49.4 11 0.00037 36.6 3.5 38 85-130 2-39 (251)
119 3i83_A 2-dehydropantoate 2-red 49.3 11 0.00036 37.8 3.6 33 84-127 2-34 (320)
120 4b4t_W RPN10, 26S proteasome r 49.2 22 0.00077 34.7 5.8 122 404-553 109-238 (268)
121 2ew2_A 2-dehydropantoate 2-red 49.1 12 0.00041 36.9 3.9 34 83-127 2-35 (316)
122 1j9j_A Stationary phase surviV 49.0 11 0.00038 36.4 3.5 38 85-130 1-38 (247)
123 3heb_A Response regulator rece 48.7 1.2E+02 0.0041 25.4 11.5 109 432-553 4-135 (152)
124 2pln_A HP1043, response regula 48.5 1E+02 0.0036 25.2 9.6 106 432-553 18-133 (137)
125 3slg_A PBGP3 protein; structur 47.8 11 0.00039 38.1 3.6 36 82-127 22-58 (372)
126 3mcu_A Dipicolinate synthase, 47.8 16 0.00054 34.3 4.2 38 82-127 3-42 (207)
127 3sc6_A DTDP-4-dehydrorhamnose 47.5 6 0.00021 38.5 1.4 33 84-126 5-37 (287)
128 3vps_A TUNA, NAD-dependent epi 47.3 11 0.00037 37.1 3.3 34 84-127 7-40 (321)
129 2d1p_B TUSC, hypothetical UPF0 46.7 22 0.00076 29.9 4.7 39 86-127 3-41 (119)
130 3bq9_A Predicted rossmann fold 46.7 1.7E+02 0.0059 30.6 12.2 136 402-553 144-332 (460)
131 1fjh_A 3alpha-hydroxysteroid d 46.4 16 0.00054 34.8 4.2 34 85-127 1-34 (257)
132 1k68_A Phytochrome response re 46.2 1.2E+02 0.004 24.6 12.3 110 433-553 3-131 (140)
133 1l5x_A SurviVal protein E; str 46.2 12 0.00042 36.8 3.4 38 85-130 1-38 (280)
134 2a35_A Hypothetical protein PA 46.1 11 0.00036 34.7 2.8 35 83-127 4-40 (215)
135 3n53_A Response regulator rece 45.9 1.2E+02 0.0042 24.8 10.7 107 433-553 4-122 (140)
136 1f4p_A Flavodoxin; electron tr 45.8 19 0.00064 31.1 4.3 38 85-127 1-38 (147)
137 2bka_A CC3, TAT-interacting pr 45.6 12 0.0004 35.2 3.1 36 82-127 16-53 (242)
138 1rkx_A CDP-glucose-4,6-dehydra 45.6 13 0.00043 37.5 3.5 36 82-127 7-42 (357)
139 3ijp_A DHPR, dihydrodipicolina 45.5 20 0.00068 35.5 4.8 43 471-513 82-124 (288)
140 1ek6_A UDP-galactose 4-epimera 45.5 14 0.00048 36.9 3.9 33 84-126 2-34 (348)
141 3qxc_A Dethiobiotin synthetase 45.2 24 0.00083 33.8 5.3 41 82-126 18-58 (242)
142 2v4n_A Multifunctional protein 44.9 14 0.00049 35.8 3.6 39 84-130 1-39 (254)
143 3c1o_A Eugenol synthase; pheny 44.9 12 0.00042 36.9 3.3 34 84-127 4-37 (321)
144 3hdg_A Uncharacterized protein 44.9 1.3E+02 0.0043 24.6 11.4 109 432-553 7-125 (137)
145 1bg6_A N-(1-D-carboxylethyl)-L 44.8 16 0.00053 36.9 4.1 35 82-127 2-36 (359)
146 4dzz_A Plasmid partitioning pr 44.6 21 0.0007 32.5 4.6 39 85-127 1-39 (206)
147 1rpn_A GDP-mannose 4,6-dehydra 44.4 15 0.0005 36.5 3.8 35 83-127 13-47 (335)
148 1xq6_A Unknown protein; struct 44.2 18 0.00062 33.9 4.2 35 83-127 3-39 (253)
149 4g65_A TRK system potassium up 44.0 8.6 0.0003 40.9 2.0 111 405-518 211-344 (461)
150 3auf_A Glycinamide ribonucleot 44.0 2.1E+02 0.0072 26.9 11.8 36 83-127 21-58 (229)
151 3g17_A Similar to 2-dehydropan 44.0 9.8 0.00034 37.6 2.3 33 84-127 2-34 (294)
152 3ego_A Probable 2-dehydropanto 43.9 15 0.00051 36.6 3.7 32 84-127 2-33 (307)
153 3dhn_A NAD-dependent epimerase 43.9 16 0.00053 34.0 3.6 33 85-127 5-37 (227)
154 3kjh_A CO dehydrogenase/acetyl 43.8 15 0.00051 34.6 3.6 37 85-127 1-37 (254)
155 2dkn_A 3-alpha-hydroxysteroid 43.8 18 0.00062 34.0 4.2 34 85-127 1-34 (255)
156 1y1p_A ARII, aldehyde reductas 43.8 17 0.00058 36.0 4.1 36 82-127 9-44 (342)
157 3t6k_A Response regulator rece 43.8 1.3E+02 0.0046 24.6 11.2 108 433-553 5-124 (136)
158 3k96_A Glycerol-3-phosphate de 43.7 14 0.00049 37.7 3.6 35 82-127 27-61 (356)
159 3lqk_A Dipicolinate synthase s 43.6 16 0.00055 34.1 3.6 39 82-128 5-45 (201)
160 3hn2_A 2-dehydropantoate 2-red 43.5 12 0.00042 37.2 2.9 33 84-127 2-34 (312)
161 1z82_A Glycerol-3-phosphate de 43.4 16 0.00054 36.7 3.8 34 83-127 13-46 (335)
162 1sb8_A WBPP; epimerase, 4-epim 43.3 14 0.00049 37.0 3.5 35 83-127 26-60 (352)
163 4e7p_A Response regulator; DNA 43.3 1.4E+02 0.0049 24.8 12.0 111 432-553 20-140 (150)
164 3guy_A Short-chain dehydrogena 43.1 16 0.00053 34.3 3.5 34 85-127 1-34 (230)
165 3ko8_A NAD-dependent epimerase 43.0 15 0.00051 36.0 3.5 33 85-127 1-33 (312)
166 3sxp_A ADP-L-glycero-D-mannohe 42.9 18 0.00061 36.5 4.2 36 82-127 8-45 (362)
167 1id1_A Putative potassium chan 42.8 22 0.00075 30.9 4.3 35 82-127 1-35 (153)
168 1cyd_A Carbonyl reductase; sho 42.8 20 0.00068 33.7 4.3 36 82-127 5-40 (244)
169 1qyc_A Phenylcoumaran benzylic 42.7 13 0.00045 36.3 3.1 34 84-127 4-37 (308)
170 3oh8_A Nucleoside-diphosphate 42.6 17 0.00059 38.9 4.2 34 84-127 147-180 (516)
171 1qyd_A Pinoresinol-lariciresin 42.4 14 0.00047 36.3 3.2 34 84-127 4-37 (313)
172 1ydg_A Trp repressor binding p 42.4 28 0.00095 32.1 5.2 39 84-127 6-44 (211)
173 3hdv_A Response regulator; PSI 42.3 1.4E+02 0.0047 24.3 11.2 109 432-553 7-127 (136)
174 3r6d_A NAD-dependent epimerase 42.3 24 0.00082 32.6 4.7 25 100-127 14-39 (221)
175 3to5_A CHEY homolog; alpha(5)b 41.8 1.2E+02 0.0043 25.7 8.9 32 82-123 10-41 (134)
176 3tem_A Ribosyldihydronicotinam 41.8 23 0.00079 33.6 4.5 40 84-127 1-41 (228)
177 4hb9_A Similarities with proba 41.7 16 0.00053 37.2 3.5 30 84-124 1-30 (412)
178 4e21_A 6-phosphogluconate dehy 41.6 19 0.00064 36.8 4.1 36 81-127 19-54 (358)
179 1kjn_A MTH0777; hypotethical p 41.2 38 0.0013 29.9 5.2 41 82-126 4-44 (157)
180 2zki_A 199AA long hypothetical 41.1 23 0.0008 32.2 4.3 38 84-127 4-41 (199)
181 1xgk_A Nitrogen metabolite rep 40.8 19 0.00065 36.5 4.0 35 83-127 4-38 (352)
182 1o5i_A 3-oxoacyl-(acyl carrier 40.7 24 0.00082 33.6 4.5 41 77-127 12-52 (249)
183 2xj4_A MIPZ; replication, cell 40.6 24 0.00082 34.5 4.6 39 85-127 4-42 (286)
184 3l6e_A Oxidoreductase, short-c 40.2 24 0.00081 33.3 4.3 34 85-127 3-36 (235)
185 2r6j_A Eugenol synthase 1; phe 40.1 16 0.00055 36.0 3.3 32 86-127 13-44 (318)
186 3gd5_A Otcase, ornithine carba 40.1 1.5E+02 0.005 29.7 10.2 103 354-486 128-234 (323)
187 3ic5_A Putative saccharopine d 39.9 25 0.00084 28.5 3.9 33 84-127 5-38 (118)
188 2qsj_A DNA-binding response re 39.6 1.7E+02 0.0057 24.5 11.1 111 432-553 3-124 (154)
189 1ja9_A 4HNR, 1,3,6,8-tetrahydr 39.5 17 0.0006 34.8 3.3 35 82-126 19-53 (274)
190 3cnb_A DNA-binding response re 38.4 1.6E+02 0.0055 24.0 11.8 110 432-554 8-131 (143)
191 4dad_A Putative pilus assembly 38.2 1.1E+02 0.0037 25.5 8.0 68 476-553 66-141 (146)
192 2p5y_A UDP-glucose 4-epimerase 38.2 19 0.00064 35.3 3.4 32 85-126 1-32 (311)
193 3nbm_A PTS system, lactose-spe 38.1 38 0.0013 28.1 4.7 43 82-130 4-46 (108)
194 1ooe_A Dihydropteridine reduct 38.1 20 0.00068 33.7 3.4 25 100-127 12-36 (236)
195 3l77_A Short-chain alcohol deh 37.9 28 0.00097 32.5 4.5 34 85-127 2-35 (235)
196 2gas_A Isoflavone reductase; N 37.9 16 0.00056 35.6 2.9 34 84-127 2-35 (307)
197 3ea0_A ATPase, para family; al 37.4 28 0.00097 32.6 4.4 41 83-127 2-43 (245)
198 2i6u_A Otcase, ornithine carba 37.3 2.3E+02 0.0078 28.0 11.1 107 350-486 116-226 (307)
199 2c5a_A GDP-mannose-3', 5'-epim 37.1 24 0.00083 35.8 4.1 34 84-127 29-62 (379)
200 2qr3_A Two-component system re 37.0 1.6E+02 0.0055 23.9 8.9 108 433-553 4-126 (140)
201 2afh_E Nitrogenase iron protei 36.9 34 0.0012 33.3 5.0 39 84-127 1-39 (289)
202 4e3z_A Putative oxidoreductase 36.9 24 0.00083 34.0 3.9 37 82-127 23-59 (272)
203 2gdz_A NAD+-dependent 15-hydro 36.6 30 0.001 33.1 4.5 33 86-127 8-40 (267)
204 1udb_A Epimerase, UDP-galactos 36.5 23 0.00079 35.1 3.8 31 85-125 1-31 (338)
205 2rh8_A Anthocyanidin reductase 36.4 26 0.0009 34.7 4.2 33 84-126 9-41 (338)
206 3dtt_A NADP oxidoreductase; st 36.4 29 0.00099 33.1 4.3 35 82-127 17-51 (245)
207 1mb3_A Cell division response 36.4 1.6E+02 0.0054 23.3 10.4 107 434-553 3-121 (124)
208 2acv_A Triterpene UDP-glucosyl 36.2 18 0.00062 38.2 3.1 39 84-128 9-49 (463)
209 1h5q_A NADP-dependent mannitol 36.1 25 0.00084 33.5 3.8 25 100-127 23-47 (265)
210 2qyt_A 2-dehydropantoate 2-red 36.0 18 0.00063 35.6 2.9 34 82-126 6-45 (317)
211 1gy8_A UDP-galactose 4-epimera 35.7 26 0.00089 35.6 4.1 34 84-127 2-36 (397)
212 1evy_A Glycerol-3-phosphate de 35.6 16 0.00053 37.2 2.3 33 84-127 14-47 (366)
213 2j48_A Two-component sensor ki 35.5 1.5E+02 0.0051 22.9 8.2 105 434-551 3-116 (119)
214 1e2b_A Enzyme IIB-cellobiose; 35.5 48 0.0016 27.3 4.9 45 82-132 1-45 (106)
215 2gk4_A Conserved hypothetical 35.3 26 0.0009 33.4 3.7 25 100-127 28-52 (232)
216 1dhr_A Dihydropteridine reduct 35.1 30 0.001 32.5 4.2 35 84-127 6-40 (241)
217 2vns_A Metalloreductase steap3 35.1 27 0.00094 32.5 3.8 33 84-127 28-60 (215)
218 3ius_A Uncharacterized conserv 35.0 22 0.00075 34.3 3.2 33 84-127 5-37 (286)
219 3bfv_A CAPA1, CAPB2, membrane 35.0 40 0.0014 32.7 5.1 41 83-127 80-120 (271)
220 2r85_A PURP protein PF1517; AT 34.9 22 0.00076 35.2 3.3 32 84-127 2-33 (334)
221 2vzf_A NADH-dependent FMN redu 34.9 38 0.0013 31.0 4.7 40 85-127 3-43 (197)
222 3nhm_A Response regulator; pro 34.7 1.8E+02 0.0061 23.4 11.8 107 433-553 5-122 (133)
223 3h5i_A Response regulator/sens 34.4 1.9E+02 0.0065 23.7 14.6 109 432-553 5-124 (140)
224 1ks9_A KPA reductase;, 2-dehyd 34.4 27 0.00091 33.8 3.7 32 85-127 1-32 (291)
225 2g1u_A Hypothetical protein TM 34.3 44 0.0015 29.0 4.9 34 83-127 18-51 (155)
226 2x6t_A ADP-L-glycero-D-manno-h 34.2 23 0.00079 35.5 3.3 36 82-127 44-80 (357)
227 1duv_G Octase-1, ornithine tra 34.1 1.7E+02 0.0058 29.4 9.6 105 354-486 124-233 (333)
228 3b6i_A Flavoprotein WRBA; flav 33.9 41 0.0014 30.4 4.8 38 85-127 2-40 (198)
229 2w37_A Ornithine carbamoyltran 33.9 1.6E+02 0.0054 29.9 9.4 104 354-486 147-254 (359)
230 2bgk_A Rhizome secoisolaricire 33.8 35 0.0012 32.7 4.4 24 100-126 25-48 (278)
231 3hwr_A 2-dehydropantoate 2-red 33.8 28 0.00097 34.6 3.9 36 80-127 15-50 (318)
232 1qkk_A DCTD, C4-dicarboxylate 33.6 2.1E+02 0.0071 23.9 10.6 108 433-553 4-121 (155)
233 2q1s_A Putative nucleotide sug 33.5 25 0.00085 35.7 3.5 34 84-127 32-66 (377)
234 1k66_A Phytochrome response re 33.5 2E+02 0.0067 23.5 11.6 109 432-553 6-138 (149)
235 3dfu_A Uncharacterized protein 33.5 22 0.00074 34.0 2.8 33 83-126 5-37 (232)
236 3h1g_A Chemotaxis protein CHEY 33.5 1.9E+02 0.0064 23.3 12.2 109 433-553 6-127 (129)
237 3g0o_A 3-hydroxyisobutyrate de 33.5 31 0.0011 34.0 4.1 34 83-127 6-39 (303)
238 1zmt_A Haloalcohol dehalogenas 33.3 21 0.00071 34.1 2.7 34 85-127 1-34 (254)
239 3rft_A Uronate dehydrogenase; 33.3 19 0.00065 34.6 2.4 35 84-127 2-36 (267)
240 2qzj_A Two-component response 33.3 2E+02 0.0068 23.5 9.3 109 432-553 4-121 (136)
241 4ep1_A Otcase, ornithine carba 33.2 2.2E+02 0.0075 28.6 10.3 86 388-486 167-256 (340)
242 1p9l_A Dihydrodipicolinate red 33.2 1.1E+02 0.0038 29.2 7.9 78 434-514 2-82 (245)
243 3sju_A Keto reductase; short-c 33.2 34 0.0012 33.2 4.3 37 82-127 21-57 (279)
244 2ixd_A LMBE-related protein; h 32.5 43 0.0015 32.0 4.8 42 82-129 1-42 (242)
245 1oth_A Protein (ornithine tran 32.5 3.8E+02 0.013 26.6 11.9 127 315-485 99-231 (321)
246 1w6u_A 2,4-dienoyl-COA reducta 32.5 41 0.0014 32.7 4.8 36 82-127 24-59 (302)
247 2ehd_A Oxidoreductase, oxidore 32.3 28 0.00095 32.5 3.4 25 100-127 14-38 (234)
248 1vl8_A Gluconate 5-dehydrogena 32.3 36 0.0012 32.7 4.2 34 85-127 21-54 (267)
249 3lua_A Response regulator rece 32.0 1.8E+02 0.0061 23.8 8.4 109 432-553 4-127 (140)
250 1i3c_A Response regulator RCP1 31.7 2.2E+02 0.0076 23.6 12.5 110 432-552 8-136 (149)
251 3tfo_A Putative 3-oxoacyl-(acy 31.7 37 0.0013 32.7 4.2 35 84-127 3-37 (264)
252 1uls_A Putative 3-oxoacyl-acyl 31.7 40 0.0014 31.9 4.4 25 100-127 14-38 (245)
253 2q62_A ARSH; alpha/beta, flavo 31.7 46 0.0016 31.9 4.9 42 82-127 32-74 (247)
254 2hq1_A Glucose/ribitol dehydro 31.7 30 0.001 32.5 3.5 25 100-127 14-38 (247)
255 3kb6_A D-lactate dehydrogenase 31.6 91 0.0031 31.3 7.3 43 472-514 189-236 (334)
256 2yy7_A L-threonine dehydrogena 31.6 20 0.00067 35.1 2.2 34 84-127 2-37 (312)
257 3oid_A Enoyl-[acyl-carrier-pro 31.5 35 0.0012 32.6 4.0 35 84-127 3-37 (258)
258 3gg2_A Sugar dehydrogenase, UD 31.5 33 0.0011 36.2 4.1 33 84-127 2-34 (450)
259 3e48_A Putative nucleoside-dip 31.5 27 0.00092 33.7 3.2 33 85-127 1-34 (289)
260 3end_A Light-independent proto 31.3 49 0.0017 32.4 5.1 39 84-127 40-78 (307)
261 1wma_A Carbonyl reductase [NAD 31.2 36 0.0012 32.3 4.0 35 84-127 3-38 (276)
262 3hv2_A Response regulator/HD d 31.0 2.3E+02 0.0079 23.6 11.4 109 432-553 14-133 (153)
263 2ywr_A Phosphoribosylglycinami 30.9 1.8E+02 0.0062 27.0 8.8 34 85-127 2-37 (216)
264 3q9l_A Septum site-determining 30.9 49 0.0017 31.2 4.9 39 85-127 2-40 (260)
265 3da8_A Probable 5'-phosphoribo 30.8 2E+02 0.0068 26.8 9.0 39 82-129 10-49 (215)
266 1uay_A Type II 3-hydroxyacyl-C 30.8 29 0.00098 32.4 3.2 25 100-127 11-35 (242)
267 3ilh_A Two component response 30.8 2.2E+02 0.0074 23.2 12.5 111 432-553 9-139 (146)
268 3fni_A Putative diflavin flavo 30.6 67 0.0023 28.2 5.4 39 84-127 4-42 (159)
269 3l4b_C TRKA K+ channel protien 30.5 39 0.0013 31.3 4.1 32 85-127 1-32 (218)
270 3to5_A CHEY homolog; alpha(5)b 30.5 2.5E+02 0.0084 23.7 10.4 111 430-552 10-132 (134)
271 2gn4_A FLAA1 protein, UDP-GLCN 30.4 32 0.0011 34.6 3.6 36 82-127 19-56 (344)
272 3eag_A UDP-N-acetylmuramate:L- 30.2 41 0.0014 33.6 4.4 33 84-126 4-36 (326)
273 1vlv_A Otcase, ornithine carba 30.2 2.5E+02 0.0085 28.0 10.0 104 354-486 138-245 (325)
274 3kht_A Response regulator; PSI 30.0 2.3E+02 0.0078 23.2 9.7 34 82-125 3-36 (144)
275 2fwm_X 2,3-dihydro-2,3-dihydro 29.9 44 0.0015 31.6 4.4 25 100-127 16-40 (250)
276 3eul_A Possible nitrate/nitrit 29.9 2.4E+02 0.0082 23.4 12.2 110 432-553 15-135 (152)
277 3osu_A 3-oxoacyl-[acyl-carrier 29.6 40 0.0014 31.8 4.0 34 85-127 4-37 (246)
278 3m6m_D Sensory/regulatory prot 29.6 2.4E+02 0.0081 23.3 10.6 109 432-553 14-136 (143)
279 3v2h_A D-beta-hydroxybutyrate 29.5 44 0.0015 32.4 4.4 34 84-126 24-57 (281)
280 4ekn_B Aspartate carbamoyltran 29.4 1.5E+02 0.005 29.5 8.1 112 354-491 121-233 (306)
281 1f0y_A HCDH, L-3-hydroxyacyl-C 29.4 44 0.0015 32.8 4.4 32 85-127 16-47 (302)
282 1fmc_A 7 alpha-hydroxysteroid 29.4 36 0.0012 32.0 3.6 36 82-127 9-44 (255)
283 1cp2_A CP2, nitrogenase iron p 29.3 50 0.0017 31.5 4.7 38 85-127 1-38 (269)
284 1d4a_A DT-diaphorase, quinone 29.1 62 0.0021 31.4 5.3 39 85-127 3-42 (273)
285 1dxh_A Ornithine carbamoyltran 29.1 1.4E+02 0.0048 30.0 8.0 105 354-486 125-233 (335)
286 3awd_A GOX2181, putative polyo 29.0 44 0.0015 31.5 4.2 25 100-127 22-46 (260)
287 2ph1_A Nucleotide-binding prot 29.0 58 0.002 31.1 5.1 39 85-127 18-56 (262)
288 1g3q_A MIND ATPase, cell divis 28.9 56 0.0019 30.3 4.9 39 85-127 2-40 (237)
289 3cio_A ETK, tyrosine-protein k 28.9 60 0.0021 31.9 5.3 41 83-127 102-142 (299)
290 2vo1_A CTP synthase 1; pyrimid 28.8 73 0.0025 31.0 5.5 43 81-126 19-61 (295)
291 3i4f_A 3-oxoacyl-[acyl-carrier 28.7 38 0.0013 32.2 3.7 35 84-127 6-40 (264)
292 1ys7_A Transcriptional regulat 28.7 3.2E+02 0.011 24.5 12.7 109 432-553 7-125 (233)
293 3doj_A AT3G25530, dehydrogenas 28.6 46 0.0016 32.8 4.4 33 84-127 21-53 (310)
294 2qxy_A Response regulator; reg 28.5 2.2E+02 0.0074 23.2 8.3 108 432-553 4-121 (142)
295 1u7z_A Coenzyme A biosynthesis 28.5 58 0.002 30.8 4.8 25 100-127 33-57 (226)
296 3zq6_A Putative arsenical pump 28.5 62 0.0021 32.2 5.4 42 83-128 11-52 (324)
297 2wsb_A Galactitol dehydrogenas 28.5 44 0.0015 31.4 4.1 25 100-127 20-44 (254)
298 1xu9_A Corticosteroid 11-beta- 28.5 48 0.0016 32.0 4.5 36 82-127 26-61 (286)
299 1hdc_A 3-alpha, 20 beta-hydrox 28.5 44 0.0015 31.7 4.1 25 100-127 14-38 (254)
300 2o23_A HADH2 protein; HSD17B10 28.4 47 0.0016 31.5 4.3 25 100-127 21-45 (265)
301 1bvy_F Protein (cytochrome P45 28.3 46 0.0016 30.5 4.0 39 84-127 21-59 (191)
302 2rcy_A Pyrroline carboxylate r 28.2 28 0.00094 33.3 2.6 35 82-127 2-40 (262)
303 1hyq_A MIND, cell division inh 28.2 60 0.002 30.8 5.0 39 85-127 2-40 (263)
304 1iy8_A Levodione reductase; ox 28.1 46 0.0016 31.8 4.2 25 100-127 22-46 (267)
305 3afn_B Carbonyl reductase; alp 28.1 33 0.0011 32.3 3.1 25 100-127 16-40 (258)
306 3rd5_A Mypaa.01249.C; ssgcid, 28.0 60 0.0021 31.4 5.1 25 100-127 25-49 (291)
307 2hrz_A AGR_C_4963P, nucleoside 28.0 29 0.001 34.4 2.8 36 82-127 12-54 (342)
308 1nff_A Putative oxidoreductase 27.9 45 0.0016 31.8 4.1 25 100-127 16-40 (260)
309 1sby_A Alcohol dehydrogenase; 27.9 44 0.0015 31.6 4.0 24 100-126 14-38 (254)
310 4ezb_A Uncharacterized conserv 27.9 39 0.0013 33.6 3.7 35 82-127 22-57 (317)
311 3cfy_A Putative LUXO repressor 27.9 2.5E+02 0.0084 22.9 10.8 107 434-553 6-122 (137)
312 3m1a_A Putative dehydrogenase; 27.7 40 0.0014 32.4 3.7 35 84-127 4-38 (281)
313 1yb1_A 17-beta-hydroxysteroid 27.7 49 0.0017 31.7 4.3 25 100-127 40-64 (272)
314 2izz_A Pyrroline-5-carboxylate 27.6 31 0.0011 34.4 2.9 35 82-127 20-58 (322)
315 1zq6_A Otcase, ornithine carba 27.6 2.9E+02 0.0098 28.0 10.0 91 388-486 176-274 (359)
316 2ae2_A Protein (tropinone redu 27.5 52 0.0018 31.3 4.4 25 100-127 18-42 (260)
317 2p4h_X Vestitone reductase; NA 27.4 39 0.0013 33.0 3.6 24 100-126 10-33 (322)
318 1yxm_A Pecra, peroxisomal tran 27.3 46 0.0016 32.4 4.1 25 100-127 27-51 (303)
319 3f6c_A Positive transcription 27.3 2.4E+02 0.0082 22.6 10.6 109 433-553 2-120 (134)
320 2dtx_A Glucose 1-dehydrogenase 27.3 49 0.0017 31.7 4.2 25 100-127 17-41 (264)
321 2a4k_A 3-oxoacyl-[acyl carrier 27.2 50 0.0017 31.6 4.3 25 100-127 15-39 (263)
322 2ph3_A 3-oxoacyl-[acyl carrier 27.1 37 0.0013 31.7 3.2 23 100-125 10-32 (245)
323 2c07_A 3-oxoacyl-(acyl-carrier 27.1 45 0.0015 32.2 4.0 23 100-125 53-75 (285)
324 1t0i_A YLR011WP; FMN binding p 27.1 72 0.0025 28.6 5.2 40 85-127 1-46 (191)
325 1xq1_A Putative tropinone redu 26.9 39 0.0013 32.2 3.4 25 100-127 23-47 (266)
326 3ak4_A NADH-dependent quinucli 26.9 49 0.0017 31.5 4.1 25 100-127 21-45 (263)
327 2bll_A Protein YFBG; decarboxy 26.9 43 0.0015 33.0 3.9 33 85-127 1-34 (345)
328 1iow_A DD-ligase, DDLB, D-ALA\ 26.9 47 0.0016 32.2 4.1 39 84-127 2-43 (306)
329 1uzm_A 3-oxoacyl-[acyl-carrier 26.8 45 0.0015 31.5 3.8 25 100-127 24-48 (247)
330 1i24_A Sulfolipid biosynthesis 26.8 39 0.0013 34.3 3.6 33 84-126 11-43 (404)
331 3d3w_A L-xylulose reductase; u 26.8 55 0.0019 30.5 4.4 25 100-127 16-40 (244)
332 2ark_A Flavodoxin; FMN, struct 26.8 63 0.0021 29.1 4.6 38 85-127 5-43 (188)
333 2pd6_A Estradiol 17-beta-dehyd 26.7 49 0.0017 31.3 4.1 25 100-127 16-40 (264)
334 3qjg_A Epidermin biosynthesis 26.7 46 0.0016 30.2 3.6 36 84-127 5-41 (175)
335 3cg0_A Response regulator rece 26.7 2.5E+02 0.0086 22.6 11.2 110 432-553 9-128 (140)
336 2vvp_A Ribose-5-phosphate isom 26.6 50 0.0017 29.6 3.7 37 82-126 1-37 (162)
337 2jah_A Clavulanic acid dehydro 26.6 55 0.0019 30.9 4.4 25 100-127 16-40 (247)
338 4hs4_A Chromate reductase; tri 26.3 32 0.0011 31.7 2.6 37 82-122 4-40 (199)
339 3tqq_A Methionyl-tRNA formyltr 26.3 67 0.0023 32.0 5.0 34 83-127 1-34 (314)
340 2d1y_A Hypothetical protein TT 26.3 51 0.0018 31.3 4.1 25 100-127 15-39 (256)
341 1p9o_A Phosphopantothenoylcyst 26.3 51 0.0017 32.9 4.1 21 107-127 68-88 (313)
342 2raf_A Putative dinucleotide-b 26.2 45 0.0015 30.8 3.6 33 84-127 19-51 (209)
343 1kyq_A Met8P, siroheme biosynt 26.1 50 0.0017 32.3 4.0 35 83-128 12-46 (274)
344 4dll_A 2-hydroxy-3-oxopropiona 26.1 48 0.0016 33.0 4.0 34 83-127 30-63 (320)
345 3gl9_A Response regulator; bet 26.1 2.5E+02 0.0084 22.3 12.1 106 434-552 4-121 (122)
346 1ml4_A Aspartate transcarbamoy 26.0 1.6E+02 0.0056 29.1 7.8 111 354-491 125-236 (308)
347 1yo6_A Putative carbonyl reduc 25.9 44 0.0015 31.2 3.5 25 100-127 12-38 (250)
348 1pvv_A Otcase, ornithine carba 25.8 2.4E+02 0.0084 27.9 9.1 103 354-486 126-232 (315)
349 1jay_A Coenzyme F420H2:NADP+ o 25.8 46 0.0016 30.4 3.6 33 85-127 1-33 (212)
350 2bw0_A 10-FTHFDH, 10-formyltet 25.8 63 0.0021 32.5 4.8 35 82-127 20-54 (329)
351 1x0v_A GPD-C, GPDH-C, glycerol 25.7 27 0.00092 35.1 2.1 35 82-127 6-47 (354)
352 1zk4_A R-specific alcohol dehy 25.7 40 0.0014 31.7 3.2 25 100-127 15-39 (251)
353 2ekp_A 2-deoxy-D-gluconate 3-d 25.6 50 0.0017 30.9 3.9 25 100-127 11-35 (239)
354 3pef_A 6-phosphogluconate dehy 25.6 51 0.0018 32.0 4.1 32 85-127 2-33 (287)
355 3ai3_A NADPH-sorbose reductase 25.6 61 0.0021 30.8 4.6 25 100-127 16-40 (263)
356 3p0r_A Azoreductase; structura 25.6 61 0.0021 30.0 4.4 42 84-127 4-48 (211)
357 3zqu_A Probable aromatic acid 25.5 67 0.0023 30.0 4.6 37 83-127 3-40 (209)
358 2pnf_A 3-oxoacyl-[acyl-carrier 25.4 42 0.0014 31.4 3.3 25 100-127 16-40 (248)
359 1n2s_A DTDP-4-, DTDP-glucose o 25.4 31 0.0011 33.4 2.4 32 85-127 1-32 (299)
360 2hna_A Protein MIOC, flavodoxi 25.4 49 0.0017 28.4 3.5 36 85-125 2-37 (147)
361 3rpe_A MDAB, modulator of drug 25.3 71 0.0024 30.0 4.8 42 84-127 25-69 (218)
362 3crn_A Response regulator rece 25.1 2.7E+02 0.0092 22.4 10.9 108 433-553 4-121 (132)
363 2fzv_A Putative arsenical resi 25.1 71 0.0024 31.3 4.9 42 82-127 56-98 (279)
364 1yb4_A Tartronic semialdehyde 25.1 32 0.0011 33.4 2.5 32 83-125 2-33 (295)
365 3q0i_A Methionyl-tRNA formyltr 24.9 58 0.002 32.6 4.3 35 82-127 5-39 (318)
366 1txg_A Glycerol-3-phosphate de 24.9 40 0.0014 33.4 3.1 31 85-126 1-31 (335)
367 1t2a_A GDP-mannose 4,6 dehydra 24.9 49 0.0017 33.2 3.9 25 100-127 33-57 (375)
368 3gk3_A Acetoacetyl-COA reducta 24.8 47 0.0016 31.8 3.6 35 84-127 24-58 (269)
369 3gem_A Short chain dehydrogena 24.8 38 0.0013 32.5 2.9 25 100-127 36-60 (260)
370 1oc2_A DTDP-glucose 4,6-dehydr 24.8 41 0.0014 33.3 3.2 25 100-127 13-39 (348)
371 2i87_A D-alanine-D-alanine lig 24.7 33 0.0011 34.8 2.5 43 82-127 1-44 (364)
372 3cky_A 2-hydroxymethyl glutara 24.7 46 0.0016 32.4 3.5 33 83-126 3-35 (301)
373 2zat_A Dehydrogenase/reductase 24.6 49 0.0017 31.4 3.6 25 100-127 23-47 (260)
374 3qvl_A Putative hydantoin race 24.6 2.1E+02 0.0073 27.1 8.2 40 84-128 1-40 (245)
375 2ew8_A (S)-1-phenylethanol deh 24.5 58 0.002 30.7 4.1 25 100-127 16-40 (249)
376 3qha_A Putative oxidoreductase 24.5 36 0.0012 33.4 2.6 33 84-127 15-47 (296)
377 2pk3_A GDP-6-deoxy-D-LYXO-4-he 24.4 51 0.0017 32.1 3.8 25 100-127 21-45 (321)
378 3k9g_A PF-32 protein; ssgcid, 24.4 55 0.0019 31.2 4.0 41 82-127 24-64 (267)
379 1fy2_A Aspartyl dipeptidase; s 24.4 1.3E+02 0.0046 28.1 6.6 103 406-511 4-123 (229)
380 2b4q_A Rhamnolipids biosynthes 24.2 59 0.002 31.3 4.2 33 86-127 30-62 (276)
381 3r0j_A Possible two component 24.2 4.2E+02 0.014 24.3 11.6 109 432-553 23-141 (250)
382 1meo_A Phosophoribosylglycinam 24.2 2.9E+02 0.01 25.4 8.8 35 85-128 1-37 (209)
383 4ds3_A Phosphoribosylglycinami 24.1 2.9E+02 0.0099 25.6 8.7 37 82-127 5-43 (209)
384 2nm0_A Probable 3-oxacyl-(acyl 24.1 67 0.0023 30.5 4.5 25 100-127 30-54 (253)
385 3la6_A Tyrosine-protein kinase 24.0 78 0.0027 30.9 5.0 41 83-127 90-130 (286)
386 2cfc_A 2-(R)-hydroxypropyl-COM 23.9 66 0.0022 30.1 4.4 25 100-127 11-35 (250)
387 3lyl_A 3-oxoacyl-(acyl-carrier 23.9 54 0.0018 30.8 3.7 25 100-127 14-38 (247)
388 1jbe_A Chemotaxis protein CHEY 23.9 2.7E+02 0.0093 22.0 10.8 109 432-553 4-125 (128)
389 2ag5_A DHRS6, dehydrogenase/re 23.8 50 0.0017 31.1 3.5 25 100-127 15-39 (246)
390 1sny_A Sniffer CG10964-PA; alp 23.7 53 0.0018 31.2 3.7 35 84-127 20-57 (267)
391 3ctm_A Carbonyl reductase; alc 23.7 70 0.0024 30.5 4.6 25 100-127 43-67 (279)
392 3dff_A Teicoplanin pseudoaglyc 23.6 80 0.0027 30.7 5.0 40 84-129 7-46 (273)
393 3o26_A Salutaridine reductase; 23.6 55 0.0019 31.7 3.9 35 84-127 11-45 (311)
394 2iz6_A Molybdenum cofactor car 23.5 1.6E+02 0.0056 26.5 6.7 136 404-553 14-174 (176)
395 1gee_A Glucose 1-dehydrogenase 23.5 45 0.0015 31.5 3.1 24 100-126 16-39 (261)
396 1kew_A RMLB;, DTDP-D-glucose 4 23.4 44 0.0015 33.3 3.2 32 85-126 1-33 (361)
397 1ybx_A Conserved hypothetical 23.4 1.9E+02 0.0067 25.1 6.8 51 501-553 66-116 (143)
398 1z45_A GAL10 bifunctional prot 23.4 50 0.0017 36.7 3.9 35 83-127 10-44 (699)
399 2y0c_A BCEC, UDP-glucose dehyd 23.3 56 0.0019 34.7 4.1 33 84-127 8-40 (478)
400 1byi_A Dethiobiotin synthase; 23.3 84 0.0029 28.8 5.0 25 100-124 12-36 (224)
401 2nwq_A Probable short-chain de 23.3 49 0.0017 31.9 3.4 33 86-127 22-54 (272)
402 1vl0_A DTDP-4-dehydrorhamnose 23.3 35 0.0012 32.9 2.3 33 84-126 12-44 (292)
403 1sqs_A Conserved hypothetical 23.3 69 0.0024 30.2 4.4 40 85-127 2-42 (242)
404 3pg5_A Uncharacterized protein 23.3 50 0.0017 33.5 3.6 37 85-127 1-39 (361)
405 2ahr_A Putative pyrroline carb 23.2 46 0.0016 31.7 3.1 34 83-127 2-35 (259)
406 3tpf_A Otcase, ornithine carba 23.2 5.4E+02 0.019 25.3 12.2 132 315-491 89-227 (307)
407 2fb6_A Conserved hypothetical 23.2 67 0.0023 26.9 3.7 40 84-127 7-48 (117)
408 2uvd_A 3-oxoacyl-(acyl-carrier 23.1 62 0.0021 30.4 4.0 24 100-126 13-36 (246)
409 1zem_A Xylitol dehydrogenase; 23.1 64 0.0022 30.7 4.1 25 100-127 16-40 (262)
410 3lte_A Response regulator; str 23.1 2.9E+02 0.0098 22.0 11.2 109 432-553 6-125 (132)
411 3orf_A Dihydropteridine reduct 23.1 67 0.0023 30.4 4.2 33 86-127 23-55 (251)
412 2z1n_A Dehydrogenase; reductas 23.1 64 0.0022 30.6 4.1 33 86-127 8-40 (260)
413 3f2v_A General stress protein 22.9 41 0.0014 30.9 2.5 38 85-127 2-39 (192)
414 3av3_A Phosphoribosylglycinami 22.9 3.5E+02 0.012 24.9 9.2 34 85-127 4-39 (212)
415 1mxh_A Pteridine reductase 2; 22.8 46 0.0016 31.9 3.1 24 100-126 20-43 (276)
416 3dfi_A Pseudoaglycone deacetyl 22.7 93 0.0032 30.1 5.2 40 84-129 7-46 (270)
417 3op4_A 3-oxoacyl-[acyl-carrier 22.6 67 0.0023 30.3 4.1 33 86-127 10-42 (248)
418 1t5b_A Acyl carrier protein ph 22.6 78 0.0027 28.4 4.5 41 85-127 2-44 (201)
419 3icc_A Putative 3-oxoacyl-(acy 22.6 65 0.0022 30.2 4.1 35 84-127 6-40 (255)
420 3lcm_A SMU.1420, putative oxid 22.6 63 0.0021 29.5 3.8 38 85-127 1-39 (196)
421 1vpd_A Tartronate semialdehyde 22.6 55 0.0019 31.8 3.6 33 84-127 5-37 (299)
422 1ehi_A LMDDL2, D-alanine:D-lac 22.6 61 0.0021 33.0 4.1 43 82-127 1-45 (377)
423 3l6d_A Putative oxidoreductase 22.6 60 0.0021 32.0 3.9 33 83-126 8-40 (306)
424 2x9g_A PTR1, pteridine reducta 22.5 39 0.0013 32.8 2.5 25 100-127 32-56 (288)
425 3tri_A Pyrroline-5-carboxylate 22.4 53 0.0018 32.0 3.4 35 82-127 1-38 (280)
426 2zyd_A 6-phosphogluconate dehy 22.4 51 0.0017 35.0 3.5 36 81-127 12-47 (480)
427 3kkl_A Probable chaperone prot 22.3 80 0.0027 30.1 4.6 44 84-127 3-51 (244)
428 3qiv_A Short-chain dehydrogena 22.3 81 0.0028 29.6 4.7 34 85-127 9-42 (253)
429 3uuw_A Putative oxidoreductase 22.2 1.8E+02 0.0063 28.1 7.5 91 404-508 7-97 (308)
430 2kyr_A Fructose-like phosphotr 22.2 1.2E+02 0.0041 25.3 5.0 39 84-127 5-45 (111)
431 3h7a_A Short chain dehydrogena 22.1 82 0.0028 29.8 4.7 34 85-127 7-40 (252)
432 1ae1_A Tropinone reductase-I; 22.0 75 0.0026 30.4 4.4 25 100-127 30-54 (273)
433 2pd4_A Enoyl-[acyl-carrier-pro 21.9 86 0.003 30.0 4.9 24 101-127 18-41 (275)
434 4f6c_A AUSA reductase domain p 21.9 45 0.0015 34.4 2.9 34 84-127 69-102 (427)
435 2f1k_A Prephenate dehydrogenas 21.8 61 0.0021 31.1 3.7 32 85-127 1-32 (279)
436 3qsg_A NAD-binding phosphogluc 21.8 51 0.0017 32.6 3.2 33 83-126 23-56 (312)
437 3r6w_A FMN-dependent NADH-azor 21.8 74 0.0025 29.3 4.2 40 85-127 2-44 (212)
438 2iz1_A 6-phosphogluconate dehy 21.8 60 0.002 34.4 3.9 35 82-127 3-37 (474)
439 1kgs_A DRRD, DNA binding respo 21.7 4.3E+02 0.015 23.5 11.0 108 433-553 3-120 (225)
440 1xg5_A ARPG836; short chain de 21.7 70 0.0024 30.7 4.1 25 100-127 41-65 (279)
441 1n7h_A GDP-D-mannose-4,6-dehyd 21.7 61 0.0021 32.6 3.8 25 100-127 37-61 (381)
442 3ph3_A Ribose-5-phosphate isom 21.7 89 0.003 28.1 4.3 43 76-126 12-54 (169)
443 2h78_A Hibadh, 3-hydroxyisobut 21.6 61 0.0021 31.6 3.7 33 84-127 3-35 (302)
444 1r6d_A TDP-glucose-4,6-dehydra 21.6 60 0.0021 31.9 3.7 32 85-126 1-38 (337)
445 3ug7_A Arsenical pump-driving 21.6 96 0.0033 31.2 5.3 40 84-127 24-63 (349)
446 2rhc_B Actinorhodin polyketide 21.6 88 0.003 30.0 4.8 33 86-127 23-55 (277)
447 1vhc_A Putative KHG/KDPG aldol 21.6 4E+02 0.014 24.8 9.3 85 419-506 29-115 (224)
448 3kkj_A Amine oxidase, flavin-c 21.5 54 0.0018 30.0 3.2 30 85-125 3-32 (336)
449 1yde_A Retinal dehydrogenase/r 21.5 74 0.0025 30.5 4.3 25 100-127 18-42 (270)
450 1i36_A Conserved hypothetical 21.5 60 0.0021 30.9 3.6 29 85-124 1-29 (264)
451 3c7a_A Octopine dehydrogenase; 21.5 44 0.0015 34.3 2.8 31 84-125 2-33 (404)
452 3rkr_A Short chain oxidoreduct 21.5 75 0.0026 30.1 4.3 33 86-127 30-62 (262)
453 1fmt_A Methionyl-tRNA FMet for 21.3 99 0.0034 30.8 5.2 35 82-127 1-35 (314)
454 4gwg_A 6-phosphogluconate dehy 21.3 61 0.0021 34.5 3.8 35 82-127 2-36 (484)
455 1p2f_A Response regulator; DRR 21.3 4.1E+02 0.014 23.6 9.4 106 434-553 4-117 (220)
456 1jkx_A GART;, phosphoribosylgl 21.3 4.8E+02 0.016 24.0 9.7 34 85-127 1-36 (212)
457 2m1z_A LMO0427 protein; homolo 21.3 1.2E+02 0.0042 24.9 4.8 39 84-127 2-42 (106)
458 3p19_A BFPVVD8, putative blue 21.3 76 0.0026 30.4 4.3 34 85-127 16-49 (266)
459 3un1_A Probable oxidoreductase 21.2 70 0.0024 30.5 4.0 34 85-127 28-61 (260)
460 1orr_A CDP-tyvelose-2-epimeras 21.2 64 0.0022 31.7 3.8 24 100-126 10-33 (347)
461 3f6p_A Transcriptional regulat 21.2 3E+02 0.01 21.6 9.9 106 434-552 4-118 (120)
462 2c20_A UDP-glucose 4-epimerase 21.2 65 0.0022 31.5 3.8 33 85-127 2-34 (330)
463 3kcn_A Adenylate cyclase homol 21.2 3.5E+02 0.012 22.3 13.4 108 432-553 4-123 (151)
464 3kto_A Response regulator rece 21.2 1.4E+02 0.0049 24.3 5.6 108 433-553 7-126 (136)
465 1xjc_A MOBB protein homolog; s 21.1 1.1E+02 0.0039 27.3 5.1 40 83-127 2-41 (169)
466 3tqr_A Phosphoribosylglycinami 21.1 4E+02 0.014 24.7 9.1 36 83-127 4-40 (215)
467 2rjn_A Response regulator rece 20.9 3.5E+02 0.012 22.3 10.9 109 432-553 7-126 (154)
468 1zmo_A Halohydrin dehalogenase 20.9 48 0.0016 31.2 2.7 31 85-124 1-31 (244)
469 2bi7_A UDP-galactopyranose mut 20.9 59 0.002 33.2 3.5 35 82-127 1-35 (384)
470 1p6q_A CHEY2; chemotaxis, sign 20.9 3.1E+02 0.011 21.6 9.8 107 433-552 7-126 (129)
471 1gsa_A Glutathione synthetase; 20.9 81 0.0028 30.5 4.5 40 85-127 2-41 (316)
472 1x1t_A D(-)-3-hydroxybutyrate 20.8 65 0.0022 30.5 3.7 25 100-127 13-37 (260)
473 1e7w_A Pteridine reductase; di 20.7 66 0.0023 31.2 3.7 32 85-125 9-40 (291)
474 2uyy_A N-PAC protein; long-cha 20.7 74 0.0025 31.2 4.2 33 84-127 30-62 (316)
475 2qip_A Protein of unknown func 20.7 1.6E+02 0.0056 25.9 6.1 67 414-483 90-158 (165)
476 1mv8_A GMD, GDP-mannose 6-dehy 20.6 61 0.0021 33.8 3.6 32 85-127 1-32 (436)
477 2hmt_A YUAA protein; RCK, KTN, 20.6 65 0.0022 26.9 3.2 32 85-127 7-38 (144)
478 2gwr_A DNA-binding response re 20.6 4.8E+02 0.016 23.6 11.4 108 433-553 6-122 (238)
479 2wyu_A Enoyl-[acyl carrier pro 20.5 72 0.0025 30.3 3.9 24 101-127 20-43 (261)
480 1e4e_A Vancomycin/teicoplanin 20.5 55 0.0019 32.7 3.2 43 82-127 1-44 (343)
481 1ykg_A SIR-FP, sulfite reducta 20.5 53 0.0018 29.1 2.7 38 85-127 10-47 (167)
482 3ek2_A Enoyl-(acyl-carrier-pro 20.5 82 0.0028 29.8 4.3 24 101-127 26-49 (271)
483 3q9s_A DNA-binding response re 20.4 3.9E+02 0.013 24.7 9.3 107 433-552 38-153 (249)
484 3cxt_A Dehydrogenase with diff 20.4 80 0.0027 30.7 4.3 25 100-127 43-67 (291)
485 3st7_A Capsular polysaccharide 20.4 42 0.0015 33.7 2.3 31 85-125 1-32 (369)
486 2q2v_A Beta-D-hydroxybutyrate 20.3 62 0.0021 30.6 3.4 25 100-127 13-37 (255)
487 2nzw_A Alpha1,3-fucosyltransfe 20.3 1.4E+02 0.0048 30.4 6.1 79 473-563 227-308 (371)
488 3fwz_A Inner membrane protein 20.2 45 0.0016 28.4 2.1 33 84-127 7-39 (140)
489 3dii_A Short-chain dehydrogena 20.2 86 0.0029 29.5 4.3 25 100-127 11-35 (247)
490 3iqw_A Tail-anchored protein t 20.2 87 0.003 31.4 4.5 41 82-127 13-53 (334)
491 3sbx_A Putative uncharacterize 20.1 2.9E+02 0.0098 25.2 7.7 138 397-547 8-187 (189)
492 2pi1_A D-lactate dehydrogenase 20.1 2.9E+02 0.01 27.5 8.5 44 471-514 188-236 (334)
493 1sbz_A Probable aromatic acid 20.1 84 0.0029 29.0 4.0 36 85-127 1-37 (197)
494 4egs_A Ribose 5-phosphate isom 20.0 1E+02 0.0036 27.8 4.6 44 78-127 28-72 (180)
495 3n74_A 3-ketoacyl-(acyl-carrie 20.0 95 0.0033 29.2 4.7 33 86-127 10-42 (261)
496 3dm5_A SRP54, signal recogniti 20.0 7.4E+02 0.025 25.6 12.6 84 490-585 254-342 (443)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=2.9e-83 Score=712.70 Aligned_cols=529 Identities=70% Similarity=1.187 Sum_probs=459.9
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
..||||||++|++|+.|+||++++++.|+++|+++||+|.|++|.|+++.+.++......+.+.++.+.+++++...+||
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 87 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGV 87 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTE
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCc
Confidence 36999999999999999999999999999999999999999999999999988888888999999999999999999999
Q ss_pred eEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
+++++++|.++.+.+++++..+|++..|.+|.|+..||.+|+++++++++.+++....++.+.++++| |+|+||||+++
T Consensus 88 ~~y~id~~~~~~r~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~dd-IiH~hDW~t~l 166 (536)
T 3vue_A 88 DRVFIDHPSFLEKVWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDV-VFVCNDWHTGP 166 (536)
T ss_dssp EEEEEECTTTTCC------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCE-EEEEESGGGST
T ss_pred eEEEecChhhhccccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCE-EEEECcchHHH
Confidence 99999999999999999999999999999999999999999999999999998888888888877766 69999999999
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
+|.+++..+...+.+.++|+|+|+||+.+||.++...+..++++.......++...+..+.+...+++++.++..||.|+
T Consensus 167 ~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v~ 246 (536)
T 3vue_A 167 LASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVL 246 (536)
T ss_dssp HHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEEE
T ss_pred HHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEEE
Confidence 99999999888888889999999999999999999999999999888777777777777777788999999999999999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
|||+.+++++.+...+|.+++...+..++.+|+||+|.+.|+|.+++++..+|+..+....|...|..+++++|++.+++
T Consensus 247 tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~ 326 (536)
T 3vue_A 247 TVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRK 326 (536)
T ss_dssp ESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTT
T ss_pred EcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCC
Confidence 99999999998766777777767777899999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
.|+|+|+||+.++||++.|++|++++.+.+.+|+|+|.|+...+..++.+...+++++.+.+.++.++.+.+|++||++|
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v 406 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLA 406 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSEEE
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhheee
Confidence 99999999999999999999999999888999999999998888899999999999999999999999999999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~ 562 (612)
+||++|+||++++|||+||+|||+|++||++|+|.++.+||+++....++.+|++.|+++|+++|.++++.++++.++++
T Consensus 407 ~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~ 486 (536)
T 3vue_A 407 VPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEM 486 (536)
T ss_dssp ECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred cccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999888899999999999999999999987666788999
Q ss_pred HHHHHHhhcCcHHHHHHHHHHHHHHHHcCCCCCCCCCccchhhhhhcCCC
Q 007212 563 MKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 612 (612)
Q Consensus 563 ~~~~~~~~fsw~~~a~~~~~~y~~l~~~~~~~~~~~~~~~p~a~~~~~~~ 612 (612)
++++++++|||++++++|+++|++|...++.|+.++++++|+|.|+++||
T Consensus 487 ~~~am~~~fSW~~~A~~y~~ly~~L~~~~~~p~~~~~~~aP~~~~~~~~p 536 (536)
T 3vue_A 487 VRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 536 (536)
T ss_dssp HHHHHHSCCSSHHHHHHHHHHHHTTCC-----------------------
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCCCCCCC
Confidence 99999999999999999999999998888999999999999999999998
No 2
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=4.2e-49 Score=433.30 Aligned_cols=461 Identities=32% Similarity=0.576 Sum_probs=348.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEE-EEE-eCCeeeEEEEEEeeecCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVI-ELK-VGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~gv 162 (612)
|||++|+.+++|+...||++.++.+|+++|+++||+|+|+++.++...+.+...... +.. .++ ...+.+....|+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gv 77 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAG---HITLLFGHYNGV 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTC---CEEEEEEEETTE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCC---cEEEEEEEECCc
Confidence 899999999988656899999999999999999999999999865433222111110 000 000 122333345799
Q ss_pred eEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
++++++.+.++.+ . ..+|+...+.+|.++..++..+...+.++++.+... .+||+ ||+|+|..++
T Consensus 78 ~v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~Di-vh~~~~~~~~ 142 (485)
T 2qzs_A 78 GIYLIDAPHLYDR----P-GSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDPF---------WRPDV-VHAHDWHAGL 142 (485)
T ss_dssp EEEEEECHHHHCC----S-SCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSSTT---------CCCSE-EEEETGGGTT
T ss_pred EEEEEeChhhccC----C-CCccCCcccCCCCchHHHHHHHHHHHHHHHHHhccC---------CCCCE-EEeeccchhH
Confidence 9999876654432 0 014554445567778778877777777777654310 15895 9999999888
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
++.+++... .++|+|+++|+..+++.+....+..++++...... .... +.....+++..++.+|.++
T Consensus 143 ~~~~~~~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~ad~vi 209 (485)
T 2qzs_A 143 APAYLAARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNI----HGLE---FNGQISFLKAGLYYADHIT 209 (485)
T ss_dssp HHHHHHHTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCST----TTTE---ETTEEEHHHHHHHHCSEEE
T ss_pred HHHHHhhcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhccc----cccc---ccccccHHHHHHHhcCeEE
Confidence 877766211 48999999999876555443333334443322110 0000 0112356778899999999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhh--hc--cCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNII--RK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~--~~--~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~ 398 (612)
++|+.+++.+.+. .+|...+.++ +. .++.+||||+|.+.|.|...+.+..+|+..+. ..+...+..+++++|++
T Consensus 210 ~~S~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~ 287 (485)
T 2qzs_A 210 AVSPTYAREITEP-QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTL-EDKAENKRQLQIAMGLK 287 (485)
T ss_dssp ESSHHHHHHTTSH-HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCG-GGGHHHHHHHHHHHTCC
T ss_pred ecCHHHHHHHhcc-ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccch-hHHHHhHHHHHHHcCCC
Confidence 9999999988741 1232211111 11 48999999999999998877666677777665 46666788899999998
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
.+++.++|+|+||+.++||++.+++|++.+.+++++|+|+|+|+..+.+.+++++.++++++.++.++..+.+..+|+.|
T Consensus 288 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~a 367 (485)
T 2qzs_A 288 VDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGA 367 (485)
T ss_dssp CCTTSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHHC
T ss_pred CCCCCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHhC
Confidence 65466899999999999999999999999977899999999998778889999998887778767777888878999999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------cceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
|++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ ++.|+++|+++|.+
T Consensus 368 dv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~ 437 (485)
T 2qzs_A 368 DVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIRR 437 (485)
T ss_dssp SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------CSSSHHHHHHHHHH
T ss_pred CEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEE----------CCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 899987 99999999999999
Q ss_pred HH---HhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 550 AL---ATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 550 ll---~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++ ++ ++.+.++++++..++|||+.++++|+++|+++...
T Consensus 438 ll~~~~~--~~~~~~~~~~~~~~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 438 AFVLWSR--PSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp HHHHHTS--HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHcCC--HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhhhh
Confidence 99 45 67888999999889999999999999999998654
No 3
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=1.3e-49 Score=437.31 Aligned_cols=463 Identities=35% Similarity=0.569 Sum_probs=351.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEE-EEEeCCeeeEEEEEEeeecCce
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVI-ELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
|||++|+.+++|+...||++.++.+|+++|+++||+|+|+++.++.....++..... +..+... ...+..+....|++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gv~ 79 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLG-EKADLLEVQHERLD 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSS-CCEEEEEEEETTEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecC-CeEEEEEEEecCce
Confidence 899999999999645799999999999999999999999999865433221111000 0000000 01233334468999
Q ss_pred EEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhh-ccCCCCccCCCCCCCcEEEEeCCCcccc
Q 007212 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYGKKNVVFVANDWHTSL 242 (612)
Q Consensus 164 ~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~pDvVi~~h~~~~~~ 242 (612)
+++++.+.++.+ . ..+|+...+.+|.++..++..+..++.++++.+ .. .+||+ ||+|+|.+++
T Consensus 80 v~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~Di-Ih~~~~~~~~ 143 (485)
T 1rzu_A 80 LLILDAPAYYER----S-GGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPG----------WRPDM-VHAHDWQAAM 143 (485)
T ss_dssp EEEEECHHHHCS----S-SCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCSSS----------CCCSE-EEEEHHHHTT
T ss_pred EEEEeChHHhCC----C-ccccCCcccccccchHHHHHHHHHHHHHHHHHhccC----------CCCCE-EEecccchhH
Confidence 999877654432 0 125554445667788888888888777777654 11 25895 9999998888
Q ss_pred hHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEE
Q 007212 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi 322 (612)
++.+++... ..++|+|+++|+..+++.+....+..++++...... +.. .+.....+++..++.+|.++
T Consensus 144 ~~~~~~~~~-----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~ad~vi 211 (485)
T 1rzu_A 144 TPVYMRYAE-----TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGM----EGI---EYYNDVSFLKGGLQTATALS 211 (485)
T ss_dssp HHHHHHHSS-----SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSST----TTT---EETTEEEHHHHHHHHCSEEE
T ss_pred HHHHHhhcc-----cCCCCEEEEecCccccCCCCHHHHhhcCCChhhccc----ccc---cccccccHHHHHHhhcCEEE
Confidence 877776531 038899999999877665554444444444332110 000 00112356788899999999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhh--hccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~--~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~ 400 (612)
++|+..++.+.+. .+|..++.++ ...++.+||||+|.+.|.|..+..+..+|+..+. ..+...+..+++++|++.+
T Consensus 212 ~~S~~~~~~~~~~-~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~ 289 (485)
T 1rzu_A 212 TVSPSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDDD 289 (485)
T ss_dssp ESCHHHHHHTTSH-HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCCS
T ss_pred ecCHhHHHHHhcc-ccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccch-hhHHHhHHHHHHhcCCCCC
Confidence 9999999998741 1231111111 1238999999999999998876666667776654 5666678889999999864
Q ss_pred CCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 401 ~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
+ .++|+|+||+.++||++.+++|++.+.+++++|+|+|+|+..+++.+++++.++++++.++.+++.+.+..+|+.||+
T Consensus 290 ~-~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv 368 (485)
T 1rzu_A 290 G-SPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDA 368 (485)
T ss_dssp S-SCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred C-CeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCE
Confidence 2 369999999999999999999999997789999999999877888999999888777886777788887899999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------cceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
+|+||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ ++.|+++|+++|.+++
T Consensus 369 ~v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~ll 438 (485)
T 1rzu_A 369 IIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTV 438 (485)
T ss_dssp EEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHH
T ss_pred EEECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEe----------CCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998 899987 8999999999999999
Q ss_pred ---HhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHcC
Q 007212 552 ---ATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 552 ---~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~~ 591 (612)
++ ++.+.++++++..++|||+.++++|+++|++++...
T Consensus 439 ~~~~~--~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 479 (485)
T 1rzu_A 439 RYYHD--PKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLISKG 479 (485)
T ss_dssp HHHTC--HHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC--
T ss_pred HHhCC--HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhCCC
Confidence 45 778889999998899999999999999999987543
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=6e-47 Score=408.56 Aligned_cols=424 Identities=24% Similarity=0.337 Sum_probs=327.4
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
++|||++|+.+++| ...||.+.++.+|+++|+++||+|+|+++.++...+.. ...+.+-+.....+......+|+
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~gv 75 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE----IGKIRVFGEEVQVKVSYEERGNL 75 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE----EEEEEETTEEEEEEEEEEEETTE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh----hccccccCcccceeeeeccCCCc
Confidence 47999999999988 56899999999999999999999999999876554421 11122233445566666678999
Q ss_pred eEEEEeCccccccccCCCCCcccCCCCCCCCchh-hHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 163 DRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 163 ~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~-~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
++++++. .++.+ ..+|+. |.++ ..++..+...+.+.++.+-.. ..+||+ ||+|+|..+
T Consensus 76 ~v~~~~~-~~~~~------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~Di-i~~~~~~~~ 134 (439)
T 3fro_A 76 RIYRIGG-GLLDS------EDVYGP-----GWDGLIRKAVTFGRASVLLLNDLLRE--------EPLPDV-VHFHDWHTV 134 (439)
T ss_dssp EEEEEES-GGGGC------SSTTCS-----HHHHHHHHHHHHHHHHHHHHHHHTTT--------SCCCSE-EEEESGGGH
T ss_pred eEEEecc-hhccc------cccccC-----CcchhhhhhHHHHHHHHHHHHHHhcc--------CCCCeE-EEecchhhh
Confidence 9999987 44443 234432 5566 677778888888888876100 025895 999999988
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEE
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~v 321 (612)
+++.+++.. .++|+|+++|+....+. +...+....+ ..........+++..++.+|.+
T Consensus 135 ~~~~~~~~~-------~~~~~v~~~h~~~~~~~-~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~ad~i 192 (439)
T 3fro_A 135 FAGALIKKY-------FKIPAVFTIHRLNKSKL-PAFYFHEAGL--------------SELAPYPDIDPEHTGGYIADIV 192 (439)
T ss_dssp HHHHHHHHH-------HCCCEEEEESCCCCCCE-EHHHHHHTTC--------------GGGCCSSEECHHHHHHHHCSEE
T ss_pred hhHHHHhhc-------cCCCEEEEecccccccC-chHHhCcccc--------------ccccccceeeHhhhhhhhccEE
Confidence 888887754 48999999998764221 1100000000 0000112235678889999999
Q ss_pred EecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007212 322 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~ 401 (612)
+++|+.+++.... .++.. ..++.+||||+|.+.|.|...+ ..+...+..+++++|++.
T Consensus 193 i~~S~~~~~~~~~--~~~~~------~~~i~vi~ngvd~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~-- 250 (439)
T 3fro_A 193 TTVSRGYLIDEWG--FFRNF------EGKITYVFNGIDCSFWNESYLT------------GSRDERKKSLLSKFGMDE-- 250 (439)
T ss_dssp EESCHHHHHHTHH--HHGGG------TTSEEECCCCCCTTTSCGGGSC------------SCHHHHHHHHHHHHTCCS--
T ss_pred EecCHHHHHHHhh--hhhhc------CCceeecCCCCCchhcCccccc------------chhhhhHHHHHHHcCCCC--
Confidence 9999999888432 11222 3399999999999998775211 123455788999999963
Q ss_pred CCcEEEEEccCc-cccCHHHHHHHHHhccc----CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH
Q 007212 402 NIPVIGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 402 ~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~ 476 (612)
+ ++|+|+||+. +.||++.+++|++.+.+ ++++|+|+|+|+..+++.++++..++++.+.+.+.++.+++..+++
T Consensus 251 ~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 329 (439)
T 3fro_A 251 G-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYG 329 (439)
T ss_dssp C-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHT
T ss_pred C-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHH
Confidence 3 8999999999 99999999999999977 6999999999997788999999999884444455478888999999
Q ss_pred hccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH-hhC
Q 007212 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYG 555 (612)
Q Consensus 477 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~-~~~ 555 (612)
.||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ +|+++ ++.|+++++++|.++++ +
T Consensus 330 ~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~----------~~~d~~~la~~i~~ll~~~-- 396 (439)
T 3fro_A 330 SVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV----------KAGDPGELANAILKALELS-- 396 (439)
T ss_dssp TCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE----------CTTCHHHHHHHHHHHHHHT--
T ss_pred HCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEe----------CCCCHHHHHHHHHHHHhcC--
Confidence 9999999999999999999999999999999999999999887 99987 99999999999999999 6
Q ss_pred HHHHHHHHHHHHH--hhcCcHHHHHHHHHHHHHHHHc
Q 007212 556 TQALAEMMKNGMA--QDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 556 ~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++.+.++++++.. ++|||+.++++|+++|++++.+
T Consensus 397 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 433 (439)
T 3fro_A 397 RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSIDR 433 (439)
T ss_dssp TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHh
Confidence 4556666666632 7899999999999999998754
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=3e-41 Score=365.23 Aligned_cols=407 Identities=17% Similarity=0.232 Sum_probs=284.7
Q ss_pred cCCCccccccCCCceEEEEEecccCcc-----ccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeC
Q 007212 72 QNGPSLMIVCGVGLNILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVG 146 (612)
Q Consensus 72 ~~~~~~~~~~~~~MkIl~v~~~~~P~~-----~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~ 146 (612)
+..+++....++.|||++|+..|+|.. ..||.+.++..|+++|+++||+|+|+++........
T Consensus 8 ~~~~~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~------------ 75 (438)
T 3c48_A 8 HHHSSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE------------ 75 (438)
T ss_dssp -----------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS------------
T ss_pred cccccCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc------------
Confidence 344556666677899999999988832 369999999999999999999999999874321110
Q ss_pred CeeeEEEEEEeeecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHH-hhhhccCCCCccCCC
Q 007212 147 DKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGP 225 (612)
Q Consensus 147 ~~~~~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~-~~~l~~~~~~~~~~~ 225 (612)
......|++++.+....+... . ..+....+..+....++. ++..
T Consensus 76 --------~~~~~~~v~v~~~~~~~~~~~----------~------~~~~~~~~~~~~~~~~~~~~~~~----------- 120 (438)
T 3c48_A 76 --------IVRVAENLRVINIAAGPYEGL----------S------KEELPTQLAAFTGGMLSFTRREK----------- 120 (438)
T ss_dssp --------EEEEETTEEEEEECCSCSSSC----------C------GGGGGGGHHHHHHHHHHHHHHHT-----------
T ss_pred --------cccccCCeEEEEecCCCcccc----------c------hhHHHHHHHHHHHHHHHHHHhcc-----------
Confidence 011235677776643221100 0 000011112222333333 3322
Q ss_pred CCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCC
Q 007212 226 YGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 305 (612)
Q Consensus 226 ~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (612)
.+||+ ||+|.|..++++..++.. .++|+|+++|+........ +...... ...
T Consensus 121 -~~~Di-v~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~~~------~~~~~~~-------------~~~ 172 (438)
T 3c48_A 121 -VTYDL-IHSHYWLSGQVGWLLRDL-------WRIPLIHTAHTLAAVKNSY------RDDSDTP-------------ESE 172 (438)
T ss_dssp -CCCSE-EEEEHHHHHHHHHHHHHH-------HTCCEEEECSSCHHHHSCC----------CCH-------------HHH
T ss_pred -CCCCE-EEeCCccHHHHHHHHHHH-------cCCCEEEEecCCccccccc------ccccCCc-------------chH
Confidence 13795 899987766666655544 3889999999754311000 0000000 000
Q ss_pred chhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccH
Q 007212 306 RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 306 ~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
....+.+..++.+|.++++|+..++.+.+. +|++.+ ++.+||||+|.+.|.+....
T Consensus 173 ~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~--~g~~~~------k~~vi~ngvd~~~~~~~~~~---------------- 228 (438)
T 3c48_A 173 ARRICEQQLVDNADVLAVNTQEEMQDLMHH--YDADPD------RISVVSPGADVELYSPGNDR---------------- 228 (438)
T ss_dssp HHHHHHHHHHHHCSEEEESSHHHHHHHHHH--HCCCGG------GEEECCCCCCTTTSCCC-------------------
T ss_pred HHHHHHHHHHhcCCEEEEcCHHHHHHHHHH--hCCChh------heEEecCCccccccCCcccc----------------
Confidence 112334667889999999999999998752 455544 89999999999988765321
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C--CeEEEEEec----CChhHHHHHHHHHHHCC
Q 007212 386 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGT----GKKPMEKQLEQLEILYP 457 (612)
Q Consensus 386 ~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~--~~~lvivG~----g~~~~~~~l~~l~~~~~ 457 (612)
.+..++++++++.+ .++|+|+||+.++||++.+++|++.+.+ + +++|+|+|. |+ ..+.++++..+++
T Consensus 229 -~~~~~r~~~~~~~~--~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~--~~~~l~~~~~~~~ 303 (438)
T 3c48_A 229 -ATERSRRELGIPLH--TKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA--TPDTYRHMAEELG 303 (438)
T ss_dssp --CHHHHHHTTCCSS--SEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC--------CHHHHHHHHTT
T ss_pred -hhhhhHHhcCCCCC--CcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc--HHHHHHHHHHHcC
Confidence 12347888898754 4899999999999999999999999975 3 799999998 54 5566777766643
Q ss_pred --CceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccC
Q 007212 458 --EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 458 --~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v 535 (612)
+++.+.+..+.+++..+|+.||++|+||..|+||++++|||+||+|||+++.||+.|++.++.+|+++
T Consensus 304 l~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~---------- 373 (438)
T 3c48_A 304 VEKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLV---------- 373 (438)
T ss_dssp CTTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEE----------
T ss_pred CCCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEEC----------
Confidence 57888888888888899999999999999999999999999999999999999999999999999987
Q ss_pred CCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHHHcCCCC
Q 007212 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAGSEP 594 (612)
Q Consensus 536 ~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~~~~~~~ 594 (612)
++.|+++++++|.+++++ ++.+.++++++. .+.|||+.++++|+++|++++......
T Consensus 374 ~~~d~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 432 (438)
T 3c48_A 374 DGHSPHAWADALATLLDD--DETRIRMGEDAVEHARTFSWAATAAQLSSLYNDAIANENVD 432 (438)
T ss_dssp SSCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhhcccC
Confidence 899999999999999998 677777777662 334999999999999999999765443
No 6
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=5.1e-40 Score=362.55 Aligned_cols=413 Identities=15% Similarity=0.135 Sum_probs=289.6
Q ss_pred CceEEEEEecccCcc---------ccccHHHHhhchHHHHHhCCCeEEEEEecCCccc-cccCccEEEEEEeCCeeeEEE
Q 007212 84 GLNILFVGTEVAPWS---------KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVR 153 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~---------~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (612)
+|||++|+..++|.. ..||.+.++.+|+++|+++||+|+|+++...... ..+...
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~--------------- 71 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGE--------------- 71 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCS---------------
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhh---------------
Confidence 599999999887732 4699999999999999999999999998643211 111000
Q ss_pred EEEee--ecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcE
Q 007212 154 FFHCH--KRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNV 231 (612)
Q Consensus 154 ~~~~~--~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDv 231 (612)
.... ..|++++.+....... .. ...-...+..+...+.+.++.... +||+
T Consensus 72 -~~~~~~~~gv~v~~~~~~~~~~----------~~------~~~~~~~~~~~~~~l~~~l~~~~~-----------~~Di 123 (499)
T 2r60_A 72 -IDYYQETNKVRIVRIPFGGDKF----------LP------KEELWPYLHEYVNKIINFYREEGK-----------FPQV 123 (499)
T ss_dssp -EEECTTCSSEEEEEECCSCSSC----------CC------GGGCGGGHHHHHHHHHHHHHHHTC-----------CCSE
T ss_pred -HHhccCCCCeEEEEecCCCcCC----------cC------HHHHHHHHHHHHHHHHHHHHhcCC-----------CCCE
Confidence 0001 2467777764321100 00 000000111223344445554311 4895
Q ss_pred EEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCC-cccccccccccCCCCCcCCchhHH
Q 007212 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINW 310 (612)
Q Consensus 232 Vi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 310 (612)
||+|.+..++++..++.. .++|+|+++|+..+..... +...+.. ..+...+. +.....+
T Consensus 124 -vh~~~~~~~~~~~~~~~~-------~~~p~v~~~H~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~ 183 (499)
T 2r60_A 124 -VTTHYGDGGLAGVLLKNI-------KGLPFTFTGHSLGAQKMEK---LNVNTSNFKEMDERFK---------FHRRIIA 183 (499)
T ss_dssp -EEEEHHHHHHHHHHHHHH-------HCCCEEEECSSCHHHHHHT---TCCCSTTSHHHHHHHC---------HHHHHHH
T ss_pred -EEEcCCcchHHHHHHHHh-------cCCcEEEEccCcccccchh---hccCCCCcchhhhhHH---------HHHHHHH
Confidence 899987666666655554 3889999999764321100 0000000 00000000 0011123
Q ss_pred HHHHHhhCCEEEecCHHHHHHHHcCcCCC-c----cchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccH
Q 007212 311 MKAGILESDMVLTVSPHYAQELVSGEDKG-V----ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 311 ~k~~l~~ad~vi~vS~~~~~~l~~~~~~G-~----~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
.+..++.+|.++++|+..++.+.+...+| + ..+ ++.+||||+|.+.|.|... .
T Consensus 184 ~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~------ki~vi~ngvd~~~~~~~~~----------------~ 241 (499)
T 2r60_A 184 ERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDD------KFSVIPPGVNTRVFDGEYG----------------D 241 (499)
T ss_dssp HHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGG------GEEECCCCBCTTTSSSCCC----------------H
T ss_pred HHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCC------CeEEECCCcChhhcCccch----------------h
Confidence 46778899999999999999987521134 3 333 8999999999998876532 1
Q ss_pred HHHHHHHHHhC-----CCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C-CeEEEEEec--CC-----------hh
Q 007212 386 LLKEALQAEVG-----LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-NVQIIVLGT--GK-----------KP 444 (612)
Q Consensus 386 ~~~~~l~~~~g-----l~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~-~~~lvivG~--g~-----------~~ 444 (612)
..+..+++++| ++. +.++|+|+||+.++||++.+++|++.+.+ + .++|+|+|+ |+ ..
T Consensus 242 ~~~~~~r~~~~~~~~~~~~--~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~ 319 (499)
T 2r60_A 242 KIKAKITKYLERDLGSERM--ELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKE 319 (499)
T ss_dssp HHHHHHHHHHHHHSCGGGT--TSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHH
T ss_pred hhHHHHHHHhcccccccCC--CCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchH
Confidence 22466788887 654 34899999999999999999999999965 2 468999998 32 11
Q ss_pred HHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc----cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec
Q 007212 445 MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518 (612)
Q Consensus 445 ~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~a----Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 518 (612)
+.+.++++..+++ +++.+.+..+.+++..+|+.| |++|+||.+|+||++++|||+||+|||+|+.||+.|++.+
T Consensus 320 y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~ 399 (499)
T 2r60_A 320 ILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDG 399 (499)
T ss_dssp HHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGG
T ss_pred HHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcC
Confidence 2677888877654 579999888888899999999 9999999999999999999999999999999999999999
Q ss_pred CcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHHHcCCCCC
Q 007212 519 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSEPG 595 (612)
Q Consensus 519 g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~~~~~~~~ 595 (612)
+.+|+++ ++.|+++++++|.+++++ ++.+.++++++ +.++|||+.++++|+++|++++.......
T Consensus 400 ~~~g~l~----------~~~d~~~la~~i~~ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~~~ 467 (499)
T 2r60_A 400 GKYGVLV----------DPEDPEDIARGLLKAFES--EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDEED 467 (499)
T ss_dssp GTSSEEE----------CTTCHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC-----
T ss_pred CceEEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhhhc
Confidence 9999987 999999999999999997 67777777766 35669999999999999999998755443
No 7
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=2.1e-40 Score=352.56 Aligned_cols=369 Identities=21% Similarity=0.275 Sum_probs=280.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccc-cccCccEEEEEEeCCeeeEEEEEEeeec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|++|||++|+..|+|. .||.+.++..|+++| +||+|+|+++...... ..++ ...
T Consensus 2 ~~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~---------------------~~~ 56 (394)
T 3okp_A 2 SASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD---------------------KTL 56 (394)
T ss_dssp --CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH---------------------TTC
T ss_pred CCCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc---------------------ccc
Confidence 5679999999998886 899999999999999 7999999998754321 1100 123
Q ss_pred CceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
|++++.+.....+. . ..+...+.+.++.. +||+ ||+|.+..
T Consensus 57 ~~~~~~~~~~~~~~--------------------~-----~~~~~~l~~~~~~~-------------~~Dv-v~~~~~~~ 97 (394)
T 3okp_A 57 DYEVIRWPRSVMLP--------------------T-----PTTAHAMAEIIRER-------------EIDN-VWFGAAAP 97 (394)
T ss_dssp SSEEEEESSSSCCS--------------------C-----HHHHHHHHHHHHHT-------------TCSE-EEESSCTT
T ss_pred ceEEEEcccccccc--------------------c-----hhhHHHHHHHHHhc-------------CCCE-EEECCcch
Confidence 45555553321111 0 02233444455544 4896 78886544
Q ss_pred c-chHHHHHhhhcCCCCcCCc-eEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhC
Q 007212 241 S-LIPCYLKTMYKPKGMYKSA-KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILES 318 (612)
Q Consensus 241 ~-~~~~~l~~~~~~~~~~~~~-pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~a 318 (612)
. ++...++. .++ ++|+++|+...... .......+++..++.+
T Consensus 98 ~~~~~~~~~~--------~~~~~~i~~~h~~~~~~~----------------------------~~~~~~~~~~~~~~~~ 141 (394)
T 3okp_A 98 LALMAGTAKQ--------AGASKVIASTHGHEVGWS----------------------------MLPGSRQSLRKIGTEV 141 (394)
T ss_dssp GGGGHHHHHH--------TTCSEEEEECCSTHHHHT----------------------------TSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHh--------cCCCcEEEEeccchhhhh----------------------------hcchhhHHHHHHHHhC
Confidence 3 33334333 255 48899996432000 0001234457788999
Q ss_pred CEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007212 319 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 319 d~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~ 398 (612)
|.++++|+..++.+.+. ++. ..++.+||||+|.+.|.|.. ...+..++++++++
T Consensus 142 d~ii~~s~~~~~~~~~~--~~~-------~~~~~vi~ngv~~~~~~~~~-----------------~~~~~~~~~~~~~~ 195 (394)
T 3okp_A 142 DVLTYISQYTLRRFKSA--FGS-------HPTFEHLPSGVDVKRFTPAT-----------------PEDKSATRKKLGFT 195 (394)
T ss_dssp SEEEESCHHHHHHHHHH--HCS-------SSEEEECCCCBCTTTSCCCC-----------------HHHHHHHHHHTTCC
T ss_pred CEEEEcCHHHHHHHHHh--cCC-------CCCeEEecCCcCHHHcCCCC-----------------chhhHHHHHhcCCC
Confidence 99999999999999862 221 12899999999999887732 22367789999997
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~ 476 (612)
.+ .++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+|+ ..+.++++.....+++.+.+..+.+++..+++
T Consensus 196 ~~--~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~ 271 (394)
T 3okp_A 196 DT--TPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRLEYQDMINTLA 271 (394)
T ss_dssp TT--CCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESCCHHHHHHHHH
T ss_pred cC--ceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHH
Confidence 54 4899999999999999999999999866 699999999987 66777777755557799999988899999999
Q ss_pred hccEEEEcCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 477 GADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 477 ~aDv~v~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
.||++|+||.+ |++|++++|||++|+|||+++.||..|++.++ +|+++ ++.|+++++++|.+
T Consensus 272 ~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~----------~~~d~~~l~~~i~~ 340 (394)
T 3okp_A 272 AADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVV----------EGSDVDKLSELLIE 340 (394)
T ss_dssp HCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEEC----------CTTCHHHHHHHHHH
T ss_pred hCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEe----------CCCCHHHHHHHHHH
Confidence 99999999999 99999999999999999999999999999999 99976 89999999999999
Q ss_pred HHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHHHcCCC
Q 007212 550 ALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSE 593 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~~~~~~ 593 (612)
++++ ++.+.++++++ +.++|||+.++++|+++|+++....+.
T Consensus 341 l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~~~ 385 (394)
T 3okp_A 341 LLDD--PIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKLAA 385 (394)
T ss_dssp HHTC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC----
T ss_pred HHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCcch
Confidence 9998 67777777776 457799999999999999988755433
No 8
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=2.1e-39 Score=372.11 Aligned_cols=428 Identities=15% Similarity=0.169 Sum_probs=284.5
Q ss_pred CCceEEEEEeccc---------CccccccHHHHhhc--------hHHHHHhCCCeEE----EEEecCCccccccCccEEE
Q 007212 83 VGLNILFVGTEVA---------PWSKTGGLGDVLGG--------LPPALAANGHRVM----TIAPRYDQYKDAWDTDVVI 141 (612)
Q Consensus 83 ~~MkIl~v~~~~~---------P~~~~GG~~~~~~~--------L~~~L~~~Gh~V~----vit~~~~~~~~~~~~~~~~ 141 (612)
+.|+|++|+...+ |+ +||...|+.+ |+++|+++||+|+ |+|...+.. ...+.....
T Consensus 277 ~~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~ 353 (816)
T 3s28_A 277 MVFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERL 353 (816)
T ss_dssp CCCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSE
T ss_pred ceeEEEEEcCCcccCccccCCCCC--CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcc
Confidence 3699999999877 87 9999999984 7777788999886 998875432 111111111
Q ss_pred EEEeCCeeeEEEEEEeeecCceEEEEeCccc---cccccCCCCCcccCCCCCCCCchhhHHHHHHH-HHHHHHhhhhccC
Q 007212 142 ELKVGDKIEKVRFFHCHKRGVDRVFVDHPWF---LAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLC-QAALEAPRILNLN 217 (612)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~gv~~~~v~~~~~---~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~-~~~~~~~~~l~~~ 217 (612)
+. ....+|++++++..... +.+ |- ....++ ... ..|. .++...++...
T Consensus 354 e~------------i~~~~gv~I~RvP~~~~~g~l~~-~l-~k~~L~---------~~L---~~F~~~~l~~il~~~~-- 405 (816)
T 3s28_A 354 ER------------VYDSEYCDILRVPFRTEKGIVRK-WI-SRFEVW---------PYL---ETYTEDAAVELSKELN-- 405 (816)
T ss_dssp EE------------CTTCSSEEEEEECEEETTEEECS-CC-CTTTCG---------GGH---HHHHHHHHHHHHHHCS--
T ss_pred ee------------ecCcCCeEEEEecCCCccccccc-cc-cHHHHH---------HHH---HHHHHHHHHHHHHhcC--
Confidence 00 01124777777743221 010 00 001111 111 1222 33334444432
Q ss_pred CCCccCCCCCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCccccccccccc
Q 007212 218 SNKYFSGPYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFID 297 (612)
Q Consensus 218 ~~~~~~~~~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 297 (612)
++||+ ||+|.|.+++++..++... ++|+|+|.|++....... .+..... + ..
T Consensus 406 ---------~~PDV-IHsH~~~sglva~llar~~-------gvP~V~T~Hsl~~~k~~~------~~~~~~~---~--~~ 457 (816)
T 3s28_A 406 ---------GKPDL-IIGNYSDGNLVASLLAHKL-------GVTQCTIAHALEKTKYPD------SDIYWKK---L--DD 457 (816)
T ss_dssp ---------SCCSE-EEEEHHHHHHHHHHHHHHH-------TCCEEEECSCCHHHHSTT------TTTTHHH---H--HH
T ss_pred ---------CCCeE-EEeCCchHHHHHHHHHHHc-------CCCEEEEEeccccccccc------ccchhhh---H--HH
Confidence 35895 8999999988888887763 899999999765422110 0000000 0 00
Q ss_pred CCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCc-CCCcc----ch---------hhhhccCeEEeeCCccCCCc
Q 007212 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE----LD---------NIIRKTGIKGIVNGMDVQEW 363 (612)
Q Consensus 298 ~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~-~~G~~----~~---------~~~~~~~i~vI~ngvd~~~~ 363 (612)
.|. ....+...+..++.||.|+++|+..++.+.... .++.. .. +.+ ..++.+||||+|.+.|
T Consensus 458 ~y~---~~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~-~~ki~VIpnGVD~~~F 533 (816)
T 3s28_A 458 KYH---FSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVF-DPKFNIVSPGADMSIY 533 (816)
T ss_dssp HHC---HHHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTT-CTTEEECCCCCCTTTS
T ss_pred HHH---HHHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccC-CCCEEEECCCcCHHHc
Confidence 000 001122345688999999999999998643210 11110 00 011 1289999999999999
Q ss_pred CCCcccc--cccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEe
Q 007212 364 NPLTDKY--IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG 439 (612)
Q Consensus 364 ~p~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG 439 (612)
.|...+. +...++ .......++...++.+|+..+++.++|+|+||+.+.||++.+++|++++.+ ++++|+|+|
T Consensus 534 ~P~~~~~~Rl~~~~~---~i~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG 610 (816)
T 3s28_A 534 FPYTEEKRRLTKFHS---EIEELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVG 610 (816)
T ss_dssp CCTTCTTTCCGGGHH---HHHHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEEC
T ss_pred Cccchhhhhhhhccc---cccccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEe
Confidence 8865321 000000 000000011123455666445567999999999999999999999999976 689999999
Q ss_pred cCCh---------hHHHHHHHHHHHCC--CceEEEecc----ChHHHHHHHH-hccEEEEcCCCCCCcHHHHHHHHcCCc
Q 007212 440 TGKK---------PMEKQLEQLEILYP--EKARGVAKF----NIPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTV 503 (612)
Q Consensus 440 ~g~~---------~~~~~l~~l~~~~~--~~v~~~~~~----~~~~~~~i~~-~aDv~v~pS~~E~~gl~~lEAma~G~P 503 (612)
+|+. ...+.+++++.+++ +++.+.+.. +.+++..+++ +||++|+||.+|+||++++|||+||+|
T Consensus 611 ~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~P 690 (816)
T 3s28_A 611 GDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 690 (816)
T ss_dssp CCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCC
T ss_pred CCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCC
Confidence 9872 35667777777765 578887743 3356666777 689999999999999999999999999
Q ss_pred eEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHH----HhhCHHHHHHHHHHH---HHhhcCcHHH
Q 007212 504 PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL----ATYGTQALAEMMKNG---MAQDLSWKGP 576 (612)
Q Consensus 504 vI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll----~~~~~~~~~~~~~~~---~~~~fsw~~~ 576 (612)
||+|+.||+.|++.++.+|+++ ++.|+++++++|.+++ .+ ++.+.++++++ +.++|||+.+
T Consensus 691 VIasd~GG~~EiV~dg~~Gllv----------~p~D~e~LA~aI~~lL~~Ll~d--~~~~~~m~~~ar~~a~~~fSwe~~ 758 (816)
T 3s28_A 691 TFATCKGGPAEIIVHGKSGFHI----------DPYHGDQAADTLADFFTKCKED--PSHWDEISKGGLQRIEEKYTWQIY 758 (816)
T ss_dssp EEEESSBTHHHHCCBTTTBEEE----------CTTSHHHHHHHHHHHHHHHHHC--THHHHHHHHHHHHHHHHSCCHHHH
T ss_pred EEEeCCCChHHHHccCCcEEEe----------CCCCHHHHHHHHHHHHHHhccC--HHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999987 9999999999998777 66 66777787777 3588999999
Q ss_pred HHHHHHHHHHHH
Q 007212 577 AKKWEETLLNLE 588 (612)
Q Consensus 577 a~~~~~~y~~l~ 588 (612)
+++|+++|+...
T Consensus 759 a~~ll~lY~~~g 770 (816)
T 3s28_A 759 SQRLLTLTGVYG 770 (816)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999999764
No 9
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=2.1e-38 Score=338.55 Aligned_cols=371 Identities=18% Similarity=0.190 Sum_probs=264.2
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
-|+.-+...+|++ .||.+.++..|+++|+++||+|+|+++..+.... ...+|+.
T Consensus 13 ~~~~~~~~~~~p~---~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-----------------------~~~~~i~ 66 (394)
T 2jjm_A 13 HMKLKIGITCYPS---VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN-----------------------KVYPNIY 66 (394)
T ss_dssp --CCEEEEECCC-----CHHHHHHHHHHHHHHHTTCEEEEECSSCC---------------------------CCCTTEE
T ss_pred hheeeeehhcCCC---CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc-----------------------ccCCceE
Confidence 3777777777644 7999999999999999999999999976321100 1122333
Q ss_pred EEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccch
Q 007212 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~ 243 (612)
+..+..+.+.. +. +. ...+ .+...+.+.++.. +||+ ||+|.+....+
T Consensus 67 ~~~~~~~~~~~----------~~------~~--~~~~-~~~~~l~~~l~~~-------------~~Dv-v~~~~~~~~~~ 113 (394)
T 2jjm_A 67 FHEVTVNQYSV----------FQ------YP--PYDL-ALASKMAEVAQRE-------------NLDI-LHVHYAIPHAI 113 (394)
T ss_dssp EECCCCC--------------CC------SC--CHHH-HHHHHHHHHHHHH-------------TCSE-EEECSSTTHHH
T ss_pred EEecccccccc----------cc------cc--cccH-HHHHHHHHHHHHc-------------CCCE-EEEcchhHHHH
Confidence 33332211100 00 00 0011 1233344445543 4895 89986554333
Q ss_pred HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEe
Q 007212 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~ 323 (612)
..++..... + .++|+|+++|+.... . .+. ......+++..++.+|.+++
T Consensus 114 ~~~~~~~~~--~--~~~p~v~~~h~~~~~-~--------~~~------------------~~~~~~~~~~~~~~ad~ii~ 162 (394)
T 2jjm_A 114 CAYLAKQMI--G--ERIKIVTTLHGTDIT-V--------LGS------------------DPSLNNLIRFGIEQSDVVTA 162 (394)
T ss_dssp HHHHHHHHT--T--TCSEEEEECCHHHHH-T--------TTT------------------CTTTHHHHHHHHHHSSEEEE
T ss_pred HHHHHHHhh--c--CCCCEEEEEecCccc-c--------cCC------------------CHHHHHHHHHHHhhCCEEEE
Confidence 333332211 0 268999999974320 0 000 00122456777899999999
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
+|+..++.+.+. ++. . .++.+||||+|.+.|.|.. +..++++++++.+ .
T Consensus 163 ~s~~~~~~~~~~--~~~-~------~~~~vi~ngv~~~~~~~~~--------------------~~~~~~~~~~~~~--~ 211 (394)
T 2jjm_A 163 VSHSLINETHEL--VKP-N------KDIQTVYNFIDERVYFKRD--------------------MTQLKKEYGISES--E 211 (394)
T ss_dssp SCHHHHHHHHHH--TCC-S------SCEEECCCCCCTTTCCCCC--------------------CHHHHHHTTCC-----
T ss_pred CCHHHHHHHHHh--hCC-c------ccEEEecCCccHHhcCCcc--------------------hHHHHHHcCCCCC--C
Confidence 999999998862 222 1 2899999999999887653 3456788888643 4
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhccE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
++|+|+||+.++||++.+++|++.+.+ .+++|+|+|+|+ ..+.++++..+++ +++.+.+. .+++..+++.||+
T Consensus 212 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~g~--~~~~~~~~~~adv 287 (394)
T 2jjm_A 212 KILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGP--EFCTILQLVKNLHIEDRVLFLGK--QDNVAELLAMSDL 287 (394)
T ss_dssp CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCT--THHHHHHHHHTTTCGGGBCCCBS--CSCTHHHHHTCSE
T ss_pred eEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCch--HHHHHHHHHHHcCCCCeEEEeCc--hhhHHHHHHhCCE
Confidence 899999999999999999999999976 579999999987 5566777776654 45766663 3446689999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
+|+||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 288 ~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~----------~~~d~~~la~~i~~l~~~--~~~~~ 355 (394)
T 2jjm_A 288 MLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLC----------EVGDTTGVADQAIQLLKD--EELHR 355 (394)
T ss_dssp EEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred EEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEe----------CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 999999999999999999999999999999999999999999987 899999999999999998 67777
Q ss_pred HHHHHH---HHhhcCcHHHHHHHHHHHHHHHHcC
Q 007212 561 EMMKNG---MAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 561 ~~~~~~---~~~~fsw~~~a~~~~~~y~~l~~~~ 591 (612)
++++++ +.+.|||+.++++|+++|++++...
T Consensus 356 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 389 (394)
T 2jjm_A 356 NMGERARESVYEQFRSEKIVSQYETIYYDVLRDD 389 (394)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh
Confidence 777776 3489999999999999999998654
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=4.2e-37 Score=330.84 Aligned_cols=364 Identities=14% Similarity=0.115 Sum_probs=256.9
Q ss_pred cCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeec
Q 007212 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
.|++|||++++.. +. .||.+.++..|+++|+++||+|++++...+..... .. ..+ .....
T Consensus 37 ~~~~mkIl~v~~~--~~--~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~~--~~-----------~~~---~~~~~ 96 (416)
T 2x6q_A 37 KLKGRSFVHVNST--SF--GGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFN--VT-----------KTF---HNALQ 96 (416)
T ss_dssp TTTTCEEEEEESC--SS--SSTHHHHHHHHHHHHHHTTCEEEEEECCCCHHHHH--HH-----------HHH---HHHHT
T ss_pred hhhccEEEEEeCC--CC--CCCHHHHHHHHHHHHHhCCCeEEEEEccCCcchhh--hh-----------ccc---ceeec
Confidence 3668999999986 33 79999999999999999999999998653210000 00 000 00000
Q ss_pred CceEEEEeCccccccccCCCCCcccCCCCCCCCchhhH-HHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCc
Q 007212 161 GVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQL-RFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWH 239 (612)
Q Consensus 161 gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~-r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~ 239 (612)
++. .+ .+..... .+..+.....+.++.. +||+ ||+|++.
T Consensus 97 ~~~--------------------~~------~~~~~~~~~~~~~~~~~~~~l~~~-------------~~Dv-v~~~~~~ 136 (416)
T 2x6q_A 97 GNE--------------------SL------KLTEEMKELYLNVNRENSKFIDLS-------------SFDY-VLVHDPQ 136 (416)
T ss_dssp TCC--------------------SC------CCCHHHHHHHHHHHHHHHHSSCGG-------------GSSE-EEEESST
T ss_pred ccc--------------------cc------cccHHHHHHHHHHHHHHHHHHhhc-------------CCCE-EEEeccc
Confidence 000 00 0111111 1111222233333322 4895 8999876
Q ss_pred ccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCC
Q 007212 240 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad 319 (612)
...+..+++ ..+|+|+++|+..... ......+++..+..+|
T Consensus 137 ~~~~~~~~~---------~~~p~v~~~h~~~~~~------------------------------~~~~~~~~~~~~~~~~ 177 (416)
T 2x6q_A 137 PAALIEFYE---------KKSPWLWRCHIDLSSP------------------------------NREFWEFLRRFVEKYD 177 (416)
T ss_dssp TGGGGGGSC---------CCSCEEEECCSCCSSC------------------------------CHHHHHHHHHHHTTSS
T ss_pred hhhHHHHHH---------hcCCEEEEEccccCCc------------------------------cHHHHHHHHHHHHhCC
Confidence 554432221 2489999999643210 0012344566677888
Q ss_pred EEE-ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCC
Q 007212 320 MVL-TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 320 ~vi-~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~ 398 (612)
.++ ++|+...+.+ . ..++.+||||+|...+.+... ....+..++++++++
T Consensus 178 ~~i~~~s~~~~~~~--------~------~~~~~vi~ngvd~~~~~~~~~---------------~~~~~~~~r~~~~~~ 228 (416)
T 2x6q_A 178 RYIFHLPEYVQPEL--------D------RNKAVIMPPSIDPLSEKNVEL---------------KQTEILRILERFDVD 228 (416)
T ss_dssp EEEESSGGGSCTTS--------C------TTTEEECCCCBCTTSTTTSCC---------------CHHHHHHHHHHTTCC
T ss_pred EEEEechHHHHhhC--------C------ccceEEeCCCCChhhhccccc---------------ChhhHHHHHHHhCCC
Confidence 876 5555433321 1 138999999999876654321 122356788899987
Q ss_pred CCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCC---hhHHHHHHHHHHHCC--CceEEEeccC---h
Q 007212 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK---KPMEKQLEQLEILYP--EKARGVAKFN---I 468 (612)
Q Consensus 399 ~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~---~~~~~~l~~l~~~~~--~~v~~~~~~~---~ 468 (612)
.+ .++|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+ +...+.++++..+++ +++.+.+.++ .
T Consensus 229 ~~--~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~ 306 (416)
T 2x6q_A 229 PE--KPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHA 306 (416)
T ss_dssp TT--SCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCH
T ss_pred CC--CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCH
Confidence 54 4899999999999999999999999965 699999999986 234556666665543 5788887553 5
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
+++..+++.||++|+||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ + |+++++++|.
T Consensus 307 ~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~----------~--d~~~la~~i~ 374 (416)
T 2x6q_A 307 REVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLV----------R--DANEAVEVVL 374 (416)
T ss_dssp HHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEE----------S--SHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEE----------C--CHHHHHHHHH
Confidence 678899999999999999999999999999999999999999999999999999986 5 9999999999
Q ss_pred HHHHhhCHHHHHHHHHHH---HHhhcCcHHHHHHHHHHHHHHH
Q 007212 549 RALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 549 ~ll~~~~~~~~~~~~~~~---~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+++++ ++.+.++++++ +.++|||+.++++|+++|++++
T Consensus 375 ~ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 375 YLLKH--PEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHHC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HHHhC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 99998 67777777776 3578999999999999999765
No 11
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=1.1e-37 Score=333.23 Aligned_cols=365 Identities=18% Similarity=0.190 Sum_probs=263.5
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecC
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
.++|||+|++..++|. .||.+.++..|+++|+++||+|+++++...... +..... ..|
T Consensus 18 ~~~MkIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--~~~~~~------------------~~~ 75 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDV--PGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVK--LPDYVV------------------SGG 75 (406)
T ss_dssp ---CEEEEECSSCTTS--CCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSC--CCTTEE------------------ECC
T ss_pred CCcceEEEEeccCCCC--CCcHHHHHHHHHHHHHHCCCeEEEEecCCcccc--CCcccc------------------cCC
Confidence 3469999999876664 699999999999999999999999998744220 000000 001
Q ss_pred ceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCccc
Q 007212 162 VDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~ 241 (612)
+++.+....... .+. +.. .+...+.+.++.. +||+ ||+|.+...
T Consensus 76 -~~~~~~~~~~~~--------~~~-------~~~------~~~~~l~~~l~~~-------------~~Di-i~~~~~~~~ 119 (406)
T 2gek_A 76 -KAVPIPYNGSVA--------RLR-------FGP------ATHRKVKKWIAEG-------------DFDV-LHIHEPNAP 119 (406)
T ss_dssp -CCC---------------------------CCH------HHHHHHHHHHHHH-------------CCSE-EEEECCCSS
T ss_pred -cEEeccccCCcc--------ccc-------ccH------HHHHHHHHHHHhc-------------CCCE-EEECCccch
Confidence 111110000000 000 000 1223344444443 3795 888876666
Q ss_pred chHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEE
Q 007212 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~v 321 (612)
.+...+... .++|+|+++|+...... ... ....+++..++.+|.+
T Consensus 120 ~~~~~~~~~-------~~~~~i~~~h~~~~~~~--------------~~~--------------~~~~~~~~~~~~~d~i 164 (406)
T 2gek_A 120 SLSMLALQA-------AEGPIVATFHTSTTKSL--------------TLS--------------VFQGILRPYHEKIIGR 164 (406)
T ss_dssp SHHHHHHHH-------EESSEEEEECCCCCSHH--------------HHH--------------HHHSTTHHHHTTCSEE
T ss_pred HHHHHHHHh-------cCCCEEEEEcCcchhhh--------------hHH--------------HHHHHHHHHHhhCCEE
Confidence 554444443 37899999997432110 000 0111223567899999
Q ss_pred EecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCC
Q 007212 322 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~ 401 (612)
+++|+..++.+.+. ++. .++ +||||+|...|.+.... .+++.
T Consensus 165 i~~s~~~~~~~~~~--~~~--------~~~-vi~~~v~~~~~~~~~~~-------------------------~~~~~-- 206 (406)
T 2gek_A 165 IAVSDLARRWQMEA--LGS--------DAV-EIPNGVDVASFADAPLL-------------------------DGYPR-- 206 (406)
T ss_dssp EESSHHHHHHHHHH--HSS--------CEE-ECCCCBCHHHHHTCCCC-------------------------TTCSC--
T ss_pred EECCHHHHHHHHHh--cCC--------CcE-EecCCCChhhcCCCchh-------------------------hhccC--
Confidence 99999999988752 222 278 99999998777554310 11221
Q ss_pred CCcEEEEEccC-ccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 402 NIPVIGFIGRL-EEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~i~~iGrl-~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
+.++|+|+||+ .+.||++.+++|++.+.+ ++++|+|+|.|+. +.++++..++.+++.+.+..+.+++..+|+.|
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 283 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE---DELREQAGDLAGHLRFLGQVDDATKASAMRSA 283 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH---HHHHHHTGGGGGGEEECCSCCHHHHHHHHHHS
T ss_pred CCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH---HHHHHHHHhccCcEEEEecCCHHHHHHHHHHC
Confidence 34799999999 999999999999999976 6899999999983 66666666555678888888888888999999
Q ss_pred cEEEEcCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHH
Q 007212 479 DFILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 557 (612)
Q Consensus 479 Dv~v~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 557 (612)
|++|+||. .|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++ ++
T Consensus 284 dv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~ 351 (406)
T 2gek_A 284 DVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLV----------PVDDADGMAAALIGILED--DQ 351 (406)
T ss_dssp SEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEEC----------CTTCHHHHHHHHHHHHHC--HH
T ss_pred CEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHcC--HH
Confidence 99999996 899999999999999999999999999999999999976 899999999999999998 66
Q ss_pred HHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHHHcCC
Q 007212 558 ALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAGS 592 (612)
Q Consensus 558 ~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~~~~~ 592 (612)
.+.++++++. .+.|||+..+++|+++|++++....
T Consensus 352 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 388 (406)
T 2gek_A 352 LRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAGI 388 (406)
T ss_dssp HHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhcc
Confidence 7777777662 3489999999999999999986543
No 12
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=4.7e-38 Score=332.21 Aligned_cols=362 Identities=15% Similarity=0.168 Sum_probs=258.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++..++| .||.+.++.+|+++|+++||+|+|+++..... ...|+++
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------------------------~~~~~~v 51 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGD--------------------------CPKAFEL 51 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSC--------------------------CCTTCEE
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCC--------------------------CCCCcEE
Confidence 899999998877 59999999999999999999999999763210 0135666
Q ss_pred EEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccchH
Q 007212 165 VFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~ 244 (612)
+.+..+.+. +..++..+...+.+.++.. +||+ ||+|.+..+...
T Consensus 52 ~~~~~~~~~----------------------~~~~~~~~~~~l~~~i~~~-------------~~Dv-v~~~~~~~~~~~ 95 (374)
T 2iw1_A 52 IQVPVKSHT----------------------NHGRNAEYYAWVQNHLKEH-------------PADR-VVGFNKMPGLDV 95 (374)
T ss_dssp EECCCCCSS----------------------HHHHHHHHHHHHHHHHHHS-------------CCSE-EEESSCCTTCSE
T ss_pred EEEccCccc----------------------chhhHHHHHHHHHHHHhcc-------------CCCE-EEEecCCCCcee
Confidence 555322111 1122223334444455443 4895 888875443321
Q ss_pred HHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHh--hCCEEE
Q 007212 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL--ESDMVL 322 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~--~ad~vi 322 (612)
.+.... ...+.+.+.|+.... ..... .....+.+..+. .+|.++
T Consensus 96 ~~~~~~-------~~~~~~~~~~~~~~~------------~~~~~---------------~~~~~~~~~~~~~~~~d~ii 141 (374)
T 2iw1_A 96 YFAADV-------CYAEKVAQEKGFLYR------------LTSRY---------------RHYAAFERATFEQGKSTKLM 141 (374)
T ss_dssp EECCSC-------CHHHHHHHHCCHHHH------------TSHHH---------------HHHHHHHHHHHSTTCCCEEE
T ss_pred eecccc-------ccceeeeecccchhh------------hcHHH---------------HHHHHHHHHHhhccCCcEEE
Confidence 111100 122333333321100 00000 001112233333 699999
Q ss_pred ecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCC
Q 007212 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~ 402 (612)
++|+..++.+.+. +|++.+ ++.+||||+|.+.|.|... ...+..+++++|++.+
T Consensus 142 ~~s~~~~~~~~~~--~~~~~~------~~~vi~ngv~~~~~~~~~~----------------~~~~~~~~~~~~~~~~-- 195 (374)
T 2iw1_A 142 MLTDKQIADFQKH--YQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKNGIKEQ-- 195 (374)
T ss_dssp ESCHHHHHHHHHH--HCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHTTCCTT--
T ss_pred EcCHHHHHHHHHH--hCCChh------heEEecCCcCHHhcCcccc----------------hhHHHHHHHHhCCCCC--
Confidence 9999999998852 455544 8999999999988866432 1225678899998754
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhccc---CCeEEEEEecCChhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHh
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~--~~v~~~~~~~~~~~~~i~~~ 477 (612)
.++|+|+||+.+.||++.+++|++.+.+ ++++|+|+|+|+. +.++++..+++ +++.+.+. .+++..+++.
T Consensus 196 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ 270 (374)
T 2iw1_A 196 QNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKLGVRSNVHFFSG--RNDVSELMAA 270 (374)
T ss_dssp CEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHH
T ss_pred CeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHcCCCCcEEECCC--cccHHHHHHh
Confidence 4899999999999999999999999965 4899999999873 34555554433 46887775 3456689999
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCC-CCCHHHHHHHHHHHHHhhCH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD-PVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~-~~d~~~la~~i~~ll~~~~~ 556 (612)
||++|+||.+|+||++++|||+||+|||+++.||..|++.++.+|+++ + +.|+++++++|.+++++ +
T Consensus 271 ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~l~~~i~~l~~~--~ 338 (374)
T 2iw1_A 271 ADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI----------AEPFSQEQLNEVLRKALTQ--S 338 (374)
T ss_dssp CSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE----------CSSCCHHHHHHHHHHHHHC--H
T ss_pred cCEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEe----------CCCCCHHHHHHHHHHHHcC--h
Confidence 999999999999999999999999999999999999999999999986 6 88999999999999998 7
Q ss_pred HHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHH
Q 007212 557 QALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 557 ~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+.+.++++++ ..++++|+..++++.++++..+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 339 PLRMAWAENARHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 7788888877 3567899999999999998654
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=4.1e-37 Score=330.39 Aligned_cols=232 Identities=15% Similarity=0.116 Sum_probs=196.2
Q ss_pred HHHHhhCC--EEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 312 KAGILESD--MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 312 k~~l~~ad--~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+..++.+| .++++|+..++.+.+ +|.+ + ++.+||||+|.+.|.
T Consensus 126 ~~~~~~~~~~~ii~~S~~~~~~~~~---~~~~-~------~~~vi~ngvd~~~~~------------------------- 170 (413)
T 3oy2_A 126 WWIFSHPKVVGVMAMSKCWISDICN---YGCK-V------PINIVSHFVDTKTIY------------------------- 170 (413)
T ss_dssp GGGGGCTTEEEEEESSTHHHHHHHH---TTCC-S------CEEECCCCCCCCCCT-------------------------
T ss_pred HHHHhccCCceEEEcCHHHHHHHHH---cCCC-C------ceEEeCCCCCHHHHH-------------------------
Confidence 44577888 999999999999987 5542 2 899999999988771
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChh----HHHHHHHHHHHCC--Cc--
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EK-- 459 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~-- 459 (612)
..+++++++.+.+.++|+|+||+.++||++.+++|++.+.+ ++++|+|+|+|+.. +++.+++++.+++ ++
T Consensus 171 ~~~~~~~~~~~~~~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~ 250 (413)
T 3oy2_A 171 DARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFT 250 (413)
T ss_dssp THHHHTTCGGGTTSEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHH
T ss_pred HHHHhcCCCcccCceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccc
Confidence 23667788753356899999999999999999999999865 78999999998743 4577777776654 33
Q ss_pred -----eEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcc-------------
Q 007212 460 -----ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT------------- 521 (612)
Q Consensus 460 -----v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~------------- 521 (612)
+.+.+..+.+++..+|+.||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+
T Consensus 251 ~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~ 330 (413)
T 3oy2_A 251 HLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDD 330 (413)
T ss_dssp HHTTEEEECSCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTT
T ss_pred cccceeeccCcCCHHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCccccccccccccccc
Confidence 55556678888999999999999999999999999999999999999999999999999887
Q ss_pred --eE--EecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH---HhhcCcHHHHHHHHHHHHHHHHcC
Q 007212 522 --GF--QMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 522 --G~--~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~---~~~fsw~~~a~~~~~~y~~l~~~~ 591 (612)
|+ ++ ++.|+++|+++| +++++ ++.+.++++++. .++|||+.++++|+++|++++.+.
T Consensus 331 ~~G~~gl~----------~~~d~~~la~~i-~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 331 RDGIGGIE----------GIIDVDDLVEAF-TFFKD--EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp TCSSCCEE----------EECCHHHHHHHH-HHTTS--HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred ccCcceee----------CCCCHHHHHHHH-HHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 88 87 889999999999 99998 777778877774 478999999999999999998654
No 14
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=2.3e-37 Score=324.04 Aligned_cols=316 Identities=15% Similarity=0.116 Sum_probs=245.2
Q ss_pred CCCceEEEEEec--------c---cCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeee
Q 007212 82 GVGLNILFVGTE--------V---APWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIE 150 (612)
Q Consensus 82 ~~~MkIl~v~~~--------~---~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (612)
|++|||++++.. + +| ...||.+.++..|+++|+++||+|+++++.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p-~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~----------------- 62 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPP-QGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR----------------- 62 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSC-SSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS-----------------
T ss_pred CCccEEEEEeccccccCcccccccCc-ccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC-----------------
Confidence 557999999998 3 44 246999999999999999999999999987332110
Q ss_pred EEEEEEeeecCceEEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCc
Q 007212 151 KVRFFHCHKRGVDRVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKN 230 (612)
Q Consensus 151 ~~~~~~~~~~gv~~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pD 230 (612)
++++++.. + .. ..+.+.++.. +||
T Consensus 63 ---------~~~~~~~~--~-------------------------~~-------~~l~~~l~~~-------------~~D 86 (342)
T 2iuy_A 63 ---------PGLTVVPA--G-------------------------EP-------EEIERWLRTA-------------DVD 86 (342)
T ss_dssp ---------TTEEECSC--C-------------------------SH-------HHHHHHHHHC-------------CCS
T ss_pred ---------CcceeccC--C-------------------------cH-------HHHHHHHHhc-------------CCC
Confidence 12221100 0 00 0223334433 489
Q ss_pred EEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHH
Q 007212 231 VVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW 310 (612)
Q Consensus 231 vVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (612)
+ ||+|.+...... .. ..++| |+++|+..... .
T Consensus 87 v-i~~~~~~~~~~~---~~-------~~~~p-v~~~h~~~~~~--------------------------------~---- 118 (342)
T 2iuy_A 87 V-VHDHSGGVIGPA---GL-------PPGTA-FISSHHFTTRP--------------------------------V---- 118 (342)
T ss_dssp E-EEECSSSSSCST---TC-------CTTCE-EEEEECSSSBC--------------------------------S----
T ss_pred E-EEECCchhhHHH---Hh-------hcCCC-EEEecCCCCCc--------------------------------c----
Confidence 5 899986655432 11 14889 99999754310 0
Q ss_pred HHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHH
Q 007212 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 311 ~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (612)
.+|.++++|+..++.+.+ ..++.+||||+|.+.|.+...
T Consensus 119 ------~~d~ii~~S~~~~~~~~~-------------~~~~~vi~ngvd~~~~~~~~~---------------------- 157 (342)
T 2iuy_A 119 ------NPVGCTYSSRAQRAHCGG-------------GDDAPVIPIPVDPARYRSAAD---------------------- 157 (342)
T ss_dssp ------CCTTEEESCHHHHHHTTC-------------CTTSCBCCCCBCGGGSCCSTT----------------------
T ss_pred ------cceEEEEcCHHHHHHHhc-------------CCceEEEcCCCChhhcCcccc----------------------
Confidence 189999999999998874 128999999999988876531
Q ss_pred HHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHH
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~ 470 (612)
.. .+.++|+|+||+.+.||++.+++|++.+ +++|+|+|+|+ ..+.++++..++++++.+.+..+.++
T Consensus 158 -----~~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~ 224 (342)
T 2iuy_A 158 -----QV---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTVEPIGEVGGER 224 (342)
T ss_dssp -----CC---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTEEECCCCCHHH
T ss_pred -----cC---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCEEEeccCCHHH
Confidence 11 1346899999999999999999999998 89999999987 56667777766667899988888888
Q ss_pred HHHHHHhccEEEEcCC----------CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CcceEEecccccccccCCCC
Q 007212 471 AHMIIAGADFILIPSR----------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~----------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~~~~~~~~~~~~v~~~ 538 (612)
+..+++.||++|+||. .|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ ++
T Consensus 225 l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~----------~~- 293 (342)
T 2iuy_A 225 RLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGT----------DF- 293 (342)
T ss_dssp HHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSS----------CC-
T ss_pred HHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEc----------CC-
Confidence 8899999999999999 79999999999999999999999999999999 8999965 88
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHcC
Q 007212 539 DVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 539 d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~~ 591 (612)
|+++++++|.++++ .+.+++.+.++|||+.++++|+++|++++.+.
T Consensus 294 d~~~l~~~i~~l~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 294 APDEARRTLAGLPA-------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp CHHHHHHHHHTSCC-------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHH-------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 99999999998876 23334445688999999999999999998654
No 15
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=100.00 E-value=7.7e-36 Score=328.51 Aligned_cols=441 Identities=17% Similarity=0.178 Sum_probs=289.9
Q ss_pred EEecccCccccccHHHHhhchHHHHHhC-CCeEEEEEecCCcccc----ccCc-cEE--------EEE---EeCCeeeEE
Q 007212 90 VGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQYKD----AWDT-DVV--------IEL---KVGDKIEKV 152 (612)
Q Consensus 90 v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~~~~~~~----~~~~-~~~--------~~~---~~~~~~~~~ 152 (612)
++.|+.- +.||+-+|+..=|+.+.+. |-+...|.|....... .++. ... +.. ....+.-.+
T Consensus 33 ~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 110 (725)
T 3nb0_A 33 TATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQTMESRGVHF 110 (725)
T ss_dssp EETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHHHHTTTCCE
T ss_pred eehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecCCCCchhhcchhHHHHHHHHHHHHCCCeE
Confidence 4555543 6999999999999888875 8889999985321111 0000 000 000 001112345
Q ss_pred EEEEeeecCceEEE-EeCcccccc-------ccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCC
Q 007212 153 RFFHCHKRGVDRVF-VDHPWFLAK-------VWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSG 224 (612)
Q Consensus 153 ~~~~~~~~gv~~~~-v~~~~~~~~-------~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~ 224 (612)
++-+..++|.+++. +|...++.+ .|-..|-. .+. +..+.+...+|.+++.++++.+..+..
T Consensus 111 ~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~i~--s~~-~yg~~dd~~~F~y~~~avl~~l~~~~~-------- 179 (725)
T 3nb0_A 111 VYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVGIP--SPE-NDFETNDAILLGYTVAWFLGEVAHLDS-------- 179 (725)
T ss_dssp EEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHCCC--CCS-SCHHHHHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred EEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhCcC--CCC-cccchhHHHHHHHHHHHHHHHHHhcCC--------
Confidence 66677788887764 466555432 45221110 111 112445678899999999998877641
Q ss_pred CCCCCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCc------ccccCc-ccccccCCCccccccccccc
Q 007212 225 PYGKKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAY------QGRFAF-EDFGLLNLPAQFKSSFDFID 297 (612)
Q Consensus 225 ~~~~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~------~~~~~~-~~~~~~~l~~~~~~~~~~~~ 297 (612)
..|| |+|+|||++++++.+++..+ .++|+|||+|++.+ ||.++. ..+...+++.....
T Consensus 180 --~~pd-IiH~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~------ 244 (725)
T 3nb0_A 180 --QHAI-VAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGR------ 244 (725)
T ss_dssp --SEEE-EEEEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHH------
T ss_pred --CCCc-EEEeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhh------
Confidence 1378 59999999999999999764 59999999999853 343321 11222222211100
Q ss_pred CCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCc
Q 007212 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 377 (612)
Q Consensus 298 ~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~ 377 (612)
.-.....+++|.++..||.|+|||+.+++++... ++...+ . +||||+|+..|+|...
T Consensus 245 ----~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~L--l~r~~d------~--iIpNGID~~~f~p~~~--------- 301 (725)
T 3nb0_A 245 ----FGIYHRYCIERAAAHSADVFTTVSQITAFEAEHL--LKRKPD------G--ILPNGLNVIKFQAFHE--------- 301 (725)
T ss_dssp ----TTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHHH--TSSCCS------E--ECCCCBCCCCCSSTTH---------
T ss_pred ----hchhHHHHHHHHHHHhCCEEEECCHHHHHHHHHH--hcCCCC------E--EEcCCccccccCcchh---------
Confidence 0012357889999999999999999999999962 343332 3 3999999999988521
Q ss_pred chhhhccHHHHHHHHHHh------CCCCC-CCCcEEEEEccCc-cccCHHHHHHHHHhccc---------CCeEEEEEec
Q 007212 378 STVMDAKPLLKEALQAEV------GLPVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK---------ENVQIIVLGT 440 (612)
Q Consensus 378 ~~~~~~~~~~~~~l~~~~------gl~~~-~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~---------~~~~lvivG~ 440 (612)
....+...|..+++.+ +++.+ ++.++|+.+||++ ++||+|.+++|+.+|.. .-+.|+|+..
T Consensus 302 --~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~p~ 379 (725)
T 3nb0_A 302 --FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVMPA 379 (725)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEECCC
T ss_pred --hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEeCC
Confidence 1133445556665544 34433 2445666689999 79999999999999863 1366777766
Q ss_pred CChh--------------HHHH----------------------------------------------------------
Q 007212 441 GKKP--------------MEKQ---------------------------------------------------------- 448 (612)
Q Consensus 441 g~~~--------------~~~~---------------------------------------------------------- 448 (612)
+... +.+.
T Consensus 380 ~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~~l 459 (725)
T 3nb0_A 380 KNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEGQL 459 (725)
T ss_dssp CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTTCC
T ss_pred CCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCCCC
Confidence 5211 0000
Q ss_pred -------------------HHHHHHHC----CCceEEEeccChH-------HHHHHHHhccEEEEcCCCCCCcHHHHHHH
Q 007212 449 -------------------LEQLEILY----PEKARGVAKFNIP-------LAHMIIAGADFILIPSRFEPCGLIQLHAM 498 (612)
Q Consensus 449 -------------------l~~l~~~~----~~~v~~~~~~~~~-------~~~~i~~~aDv~v~pS~~E~~gl~~lEAm 498 (612)
++++.... ..++.+++.|... ....++++||++|+||.+|+||++++|||
T Consensus 460 pp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LEAm 539 (725)
T 3nb0_A 460 PPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAECT 539 (725)
T ss_dssp CCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHHHH
T ss_pred CCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHHHH
Confidence 01111000 0135666666322 35679999999999999999999999999
Q ss_pred HcCCceEEcCCCCcccceecC-------cceEEecccccccccCCCCCHHHHHHHHHHHHHhh---CHHHHHHHHHHH--
Q 007212 499 RYGTVPIVASTGGLVDTVEEG-------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY---GTQALAEMMKNG-- 566 (612)
Q Consensus 499 a~G~PvI~s~~gg~~e~v~~g-------~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~---~~~~~~~~~~~~-- 566 (612)
|||+|||+|++||+.|+|.++ .+|+++... ++.|+++++++|.+++... .+..+.++++++
T Consensus 540 A~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~r-------d~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~ar~ 612 (725)
T 3nb0_A 540 VMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDR-------RFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEA 612 (725)
T ss_dssp HTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECC-------SSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HcCCCEEEeCCCChhhhhhccccccCCCCceEEEeCC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999999875 369875111 3567777777777776531 255666777766
Q ss_pred HHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 567 MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 567 ~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++++|||+.++++|+++|+.++..
T Consensus 613 ~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 613 LSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp GGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHHhh
Confidence 568999999999999999998854
No 16
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=99.98 E-value=1.2e-32 Score=296.84 Aligned_cols=357 Identities=12% Similarity=0.102 Sum_probs=229.2
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecC
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
..+|||++++..|.|....||.. .+.+|+++|+++||+|+|+++......... ....+
T Consensus 44 ~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~~~~~~---------------------~~~~~ 101 (413)
T 2x0d_A 44 IKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATPNPKDL---------------------QSFKS 101 (413)
T ss_dssp CCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCCCHHHH---------------------GGGTT
T ss_pred CCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCCChHHH---------------------Hhhhc
Confidence 56899999999998842347765 688999999999999999998732100000 00001
Q ss_pred ceEEEEeCc-cccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcc
Q 007212 162 VDRVFVDHP-WFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHT 240 (612)
Q Consensus 162 v~~~~v~~~-~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~ 240 (612)
.....+... .+..+ +.. +.. . ....+.. .+||+ +|+|.|.+
T Consensus 102 ~~~~~~~~~~~~~~~--------i~~------~~~----------~---~~~~~~~----------~~~Dv-v~a~~~~~ 143 (413)
T 2x0d_A 102 FKYVMPEEDKDFALQ--------IVP------FND----------R---YNRTIPV----------AKHDI-FIATAWWT 143 (413)
T ss_dssp SEECCTTCCCCCSEE--------EEE------CSC----------C---TTCCEEE----------CTTEE-EEECSHHH
T ss_pred cceeeccCCccccce--------eee------ccc----------c---ccccccC----------CCCCE-EEEehHHH
Confidence 000000000 00000 000 000 0 0000000 24795 89998877
Q ss_pred cchHHHHHhhh-cCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCC
Q 007212 241 SLIPCYLKTMY-KPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 241 ~~~~~~l~~~~-~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad 319 (612)
+.....+.... ...+ ....|.++.+|+.... +. + +.....+.+..+..++
T Consensus 144 ~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~--~~-------------------------~-~~~~~~~~~~~~~~~~ 194 (413)
T 2x0d_A 144 AYAAQRIVSWQSDTYG-IPPNKILYIIQDFEPG--FY-------------------------Q-WSSQYVLAESTYKYRG 194 (413)
T ss_dssp HHHHHHHHHHHHHHHT-CCCCCEEEEECSCGGG--GS-------------------------C-SSHHHHHHHHTTSCCS
T ss_pred HHHHHHhhhhhhhhcc-cccCcEEEEEeechhh--cC-------------------------c-cChHHHHHHHHhccCC
Confidence 66554442110 0000 0255778778764320 00 0 0011122344555555
Q ss_pred --EEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCC
Q 007212 320 --MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 320 --~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl 397 (612)
.++++|+..++.+.+ +|.+.. ++.+|+||+|.+.|.+.. .+.
T Consensus 195 ~~~vi~~S~~~~~~l~~---~g~~~~------~~~~i~~g~d~~~~~~~~---------------------------~~~ 238 (413)
T 2x0d_A 195 PQIAVFNSELLKQYFNN---KGYNFT------DEYFFQPKINTTLKNYIN---------------------------DKR 238 (413)
T ss_dssp CEEEEEESHHHHHHHHH---HTCCCS------EEEEECCCCCHHHHTTTT---------------------------SCC
T ss_pred ceEEEEcCHHHHHHHHH---cCCCCC------ceEEeCCCcCchhhcccc---------------------------ccc
Confidence 589999999999986 344322 688999999976543311 011
Q ss_pred CCCCCCcEEEEEccC-ccccCHHHHHHHHHhccc--C---CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007212 398 PVDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK--E---NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 398 ~~~~~~~~i~~iGrl-~~~Kg~d~li~A~~~l~~--~---~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 471 (612)
++.+.|+++||+ .+.||++.+++|++.+.+ + +++|+|+|+|+... ++ ...+++.+.+..+.+++
T Consensus 239 ---~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~~-----~l--~~~~~v~f~G~~~~~~l 308 (413)
T 2x0d_A 239 ---QKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKDI-----AL--GKGIHLNSLGKLTLEDY 308 (413)
T ss_dssp ---CCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCCE-----EE--ETTEEEEEEESCCHHHH
T ss_pred ---CCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchhh-----hc--CCcCcEEEcCCCCHHHH
Confidence 134688999997 689999999999999865 4 38999999987321 11 12346888888889999
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
..+|+.||++++||..|+||++++||||||+|||++ .+|..|++.++.+|+++ ++.|+++|+++|.+++
T Consensus 309 ~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv----------~~~d~~~la~ai~~ll 377 (413)
T 2x0d_A 309 ADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSL----------EQLNPENIAETLVELC 377 (413)
T ss_dssp HHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEE----------SSCSHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEe----------CCCCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999995 46778999999999976 9999999999999999
Q ss_pred HhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+++. .+.+ ......+.|||+..+++ .+.|+++.
T Consensus 378 ~~~~--~~~~-~~~~~~~~~~W~~~~~~-~~~~~~l~ 410 (413)
T 2x0d_A 378 MSFN--NRDV-DKKESSNMMFYINEFNE-FSFIKEIE 410 (413)
T ss_dssp HHTC----------CCBSCGGGCCCC----TTHHHHH
T ss_pred cCHH--HHHH-hHHHHHHhCCHHHHHHH-HHHHHHHH
Confidence 9843 3333 21223568999999887 66677665
No 17
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.97 E-value=7.5e-30 Score=274.41 Aligned_cols=202 Identities=15% Similarity=0.119 Sum_probs=164.1
Q ss_pred HHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+++..++.+|.++++|+..++.+.+ .| ++.+||||+|.+.|.|...
T Consensus 170 ~~~~~~~~~ad~vi~~S~~~~~~~~~---~~----------~i~vipngvd~~~f~~~~~-------------------- 216 (406)
T 2hy7_A 170 REFDRVAPTLDVIALVSPAMAAEVVS---RD----------NVFHVGHGVDHNLDQLGDP-------------------- 216 (406)
T ss_dssp HHHHHHGGGCSEEEESCGGGGGGCSC---ST----------TEEECCCCBCTTHHHHHCS--------------------
T ss_pred HHHHHHHHhCCEEEEcCHHHHHHHHh---cC----------CEEEEcCCcChHhcCcccc--------------------
Confidence 45677889999999999999888764 22 7899999999887754321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccCh
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 468 (612)
.+ .++.++|+|+||+.+.||+ ++++.+. .++++|+|+|+|+ ++++ ...++|.+.+..+.
T Consensus 217 --------~~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~------~~~~--~l~~~V~f~G~~~~ 275 (406)
T 2hy7_A 217 --------SP-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM------GRHP--GYGDNVIVYGEMKH 275 (406)
T ss_dssp --------CS-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS------CCCT--TCCTTEEEECCCCH
T ss_pred --------cc-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch------HHhc--CCCCCEEEcCCCCH
Confidence 01 1233799999999999999 4444332 3789999999986 1111 23467999998888
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHH-------HcCCceEEcCCCCcccceecCcceEE-ecccccccccCCCCCH
Q 007212 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAM-------RYGTVPIVASTGGLVDTVEEGFTGFQ-MGSFSVDCEAVDPVDV 540 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~gl~~lEAm-------a~G~PvI~s~~gg~~e~v~~g~~G~~-~~~~~~~~~~v~~~d~ 540 (612)
+++..+|+.||++|+||..|+||++++||| +||+|||+|+. +.++.+|++ + +++|+
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v----------~~~d~ 339 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGY----------TPGNA 339 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEE----------CTTCH
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEe----------CCCCH
Confidence 888999999999999999999999999999 99999999997 667789997 6 99999
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHH--HHHHHH
Q 007212 541 AAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET--LLNLEV 589 (612)
Q Consensus 541 ~~la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~--y~~l~~ 589 (612)
++|+++|.++++++. . ...+.|||+.++++++++ |+++..
T Consensus 340 ~~la~ai~~ll~~~~---~------~~~~~~sw~~~a~~~~~~~~y~~~~~ 381 (406)
T 2hy7_A 340 DSVIAAITQALEAPR---V------RYRQCLNWSDTTDRVLDPRAYPETRL 381 (406)
T ss_dssp HHHHHHHHHHHHCCC---C------CCSCCCBHHHHHHHHHCGGGSGGGBS
T ss_pred HHHHHHHHHHHhCcc---h------hhhhcCCHHHHHHHHHHhhcccccCc
Confidence 999999999999854 1 235789999999999999 887664
No 18
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.97 E-value=6.2e-29 Score=261.90 Aligned_cols=339 Identities=15% Similarity=0.026 Sum_probs=227.3
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccccccCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
.|||++++. + .||....+..|+++|+++||+|+++++......+.. ...|++
T Consensus 6 ~mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----------------------~~~g~~ 57 (364)
T 1f0k_A 6 GKRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLV----------------------PKHGIE 57 (364)
T ss_dssp -CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHG----------------------GGGTCE
T ss_pred CcEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhc----------------------cccCCc
Confidence 489999973 2 588888899999999999999999998632111100 112455
Q ss_pred EEEEeCccccccccCCCCCcccCCCCCCCCchhhHHHHHHHHHHHHHhhhhccCCCCccCCCCCCCcEEEEeCCCcccch
Q 007212 164 RVFVDHPWFLAKVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGKKNVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~v~~~~~~~~~~g~~~~~~y~~~~g~~~~~~~~r~~~~~~~~~~~~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~ 243 (612)
++.+..+.+... .... ......++......+.+.++.. +||+ ||+|.....+.
T Consensus 58 ~~~~~~~~~~~~-------~~~~------~~~~~~~~~~~~~~l~~~l~~~-------------~pDv-v~~~~~~~~~~ 110 (364)
T 1f0k_A 58 IDFIRISGLRGK-------GIKA------LIAAPLRIFNAWRQARAIMKAY-------------KPDV-VLGMGGYVSGP 110 (364)
T ss_dssp EEECCCCCCTTC-------CHHH------HHTCHHHHHHHHHHHHHHHHHH-------------CCSE-EEECSSTTHHH
T ss_pred eEEecCCccCcC-------ccHH------HHHHHHHHHHHHHHHHHHHHhc-------------CCCE-EEEeCCcCchH
Confidence 554432211000 0000 0000111112233344444443 4895 78875443333
Q ss_pred HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhHHHHHHHhhCCEEEe
Q 007212 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~ 323 (612)
...+... .++|++++.|+... + ...+...+.+|.+++
T Consensus 111 ~~~~~~~-------~~~p~v~~~~~~~~-~-----------------------------------~~~~~~~~~~d~v~~ 147 (364)
T 1f0k_A 111 GGLAAWS-------LGIPVVLHEQNGIA-G-----------------------------------LTNKWLAKIATKVMQ 147 (364)
T ss_dssp HHHHHHH-------TTCCEEEEECSSSC-C-----------------------------------HHHHHHTTTCSEEEE
T ss_pred HHHHHHH-------cCCCEEEEecCCCC-c-----------------------------------HHHHHHHHhCCEEEe
Confidence 3333333 48899999986321 0 012334567999999
Q ss_pred cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCC
Q 007212 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~ 403 (612)
.++.. .+ ++.+|+||+|...+.+.. .+++++++.+ +.
T Consensus 148 ~~~~~-----------~~--------~~~~i~n~v~~~~~~~~~-----------------------~~~~~~~~~~-~~ 184 (364)
T 1f0k_A 148 AFPGA-----------FP--------NAEVVGNPVRTDVLALPL-----------------------PQQRLAGREG-PV 184 (364)
T ss_dssp SSTTS-----------SS--------SCEECCCCCCHHHHTSCC-----------------------HHHHHTTCCS-SE
T ss_pred cChhh-----------cC--------CceEeCCccchhhcccch-----------------------hhhhcccCCC-Cc
Confidence 87643 11 578999999987665431 1345566533 22
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeE-EEEEecCChhHHHHHHHHHHHCC-CceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQ-IIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~-lvivG~g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.++++.|++.+.||.+.+++|++.+.+ +++ ++++|+|+ . +.++++..+++ .++.+.+.. +++..+|+.||++
T Consensus 185 ~il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~--~-~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~ 258 (364)
T 1f0k_A 185 RVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS--Q-QSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVV 258 (364)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC--H-HHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEE
T ss_pred EEEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch--H-HHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEE
Confidence 355566799999999999999999966 788 56788887 2 45666665554 467777765 4456799999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc--------cceecCcceEEecccccccccCCCCC--HHHHHHHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV--------DTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRAL 551 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~--------e~v~~g~~G~~~~~~~~~~~~v~~~d--~~~la~~i~~ll 551 (612)
|+||. |++++|||++|+|+|+++.+|.. ++++++ .|+++ ++.| +++++++|.++
T Consensus 259 v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~----------~~~d~~~~~la~~i~~l- 322 (364)
T 1f0k_A 259 VCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKII----------EQPQLSVDAVANTLAGW- 322 (364)
T ss_dssp EECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEEC----------CGGGCCHHHHHHHHHTC-
T ss_pred EECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEe----------ccccCCHHHHHHHHHhc-
Confidence 99994 99999999999999999999865 355555 59976 8888 99999999998
Q ss_pred HhhCHHHHHHHHHHHH--HhhcCcHHHHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~~y~~l~ 588 (612)
+ ++.+.++++++. .+.|+|+.++++|+++|++..
T Consensus 323 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 323 -S--RETLLTMAERARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp -C--HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred -C--HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 5 677788887773 478999999999999998764
No 19
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=99.96 E-value=3.2e-28 Score=272.03 Aligned_cols=367 Identities=15% Similarity=0.174 Sum_probs=265.2
Q ss_pred HHHHHHHHHH-hhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH-HHHhhhcCCCC-----c--CCceEEEEEecCCc
Q 007212 201 SLLCQAALEA-PRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVFCIHNIAY 271 (612)
Q Consensus 201 ~~~~~~~~~~-~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~-~l~~~~~~~~~-----~--~~~pvv~~iH~~~~ 271 (612)
.+|+.++++. ++.+...... +.. +++|| |||+||||+++++. +++.++-..|+ + .+..++||+|++.+
T Consensus 273 ~ff~~a~lq~ilr~~~~~~~~-~~~-l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~ 349 (796)
T 1l5w_A 273 YFQCACSVADILRRHHLAGRK-LHE-LADYE-VIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMP 349 (796)
T ss_dssp HHHHHHHHHHHHHHHHHTTCC-GGG-HHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSG
T ss_pred HHHHHHHHHHHHHHHHHcCCC-hhh-cCCcc-EEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcH
Confidence 5788888876 5543210000 000 11478 59999999999988 55544321121 1 36789999999999
Q ss_pred ccc--cCcccccccC---------CCcccccc-----------cccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHH
Q 007212 272 QGR--FAFEDFGLLN---------LPAQFKSS-----------FDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYA 329 (612)
Q Consensus 272 ~~~--~~~~~~~~~~---------l~~~~~~~-----------~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~ 329 (612)
+|. |+...+..+- ++..+... +.. .+. .....+++++.++..|+.|.+||+-+.
T Consensus 350 egle~wp~~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~~~~~~~~-~~i---~~~~~vnMa~lai~~S~~VNgVS~lH~ 425 (796)
T 1l5w_A 350 EALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEKVWAK-LAV---VHDKQVHMANLCVVGGFAVNGVAALHS 425 (796)
T ss_dssp GGSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHH-HCS---EETTEEEHHHHHHHHSSEEEESSHHHH
T ss_pred hhhhcCCHHHHHHHhHHHHHHHhccCHHHHHHHHHhcCCcHHHHhh-hhc---ccCCcccHHHHHHHhcCccccccHHHH
Confidence 985 5554442211 01100000 000 001 112367899999999999999999999
Q ss_pred HHHHcCcCCCccchhhhhccCeEEeeCCccCCCc----CCCcccccccccC----------------cch------hhhc
Q 007212 330 QELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD----------------AST------VMDA 383 (612)
Q Consensus 330 ~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~----~p~~~~~~~~~~~----------------~~~------~~~~ 383 (612)
+.++.. .++ ..-. +.+.++..|.||||...| +|..++.+..+|+ ..+ +.+.
T Consensus 426 e~ik~~-~f~-~~~~-~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~~l~~~ 502 (796)
T 1l5w_A 426 DLVVKD-LFP-EYHQ-LWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREI 502 (796)
T ss_dssp HHHHHT-TSH-HHHH-HCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHH
T ss_pred HHHHhH-Hhh-HHHH-hCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHHHHHHH
Confidence 999852 232 1111 223489999999999999 7877766666665 332 3467
Q ss_pred cHHHHHH----HHHHhCCCCCCCCcEEEEEccCccccCHHH-HHHHHHhccc---------CCeEEEEEecCChhHHHH-
Q 007212 384 KPLLKEA----LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ- 448 (612)
Q Consensus 384 ~~~~~~~----l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~-li~A~~~l~~---------~~~~lvivG~g~~~~~~~- 448 (612)
|..+|.+ +++++|++.+++.+.++++.|+.++||.++ ++..+..+.+ .+++|++.|.+.+.++..
T Consensus 503 K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK 582 (796)
T 1l5w_A 503 KQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAK 582 (796)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChhHHHHH
Confidence 7778888 589999999999999999999999999999 8888887755 479999999988655444
Q ss_pred -----HHHHHH------HCCC--ceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007212 449 -----LEQLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLV 513 (612)
Q Consensus 449 -----l~~l~~------~~~~--~v~~~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~ 513 (612)
+.+++. ..++ +|.++..|+..+++.++++||++++||+ +|+||+..+-||.+|++.|.+-.|...
T Consensus 583 ~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanv 662 (796)
T 1l5w_A 583 NIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANV 662 (796)
T ss_dssp HHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHH
T ss_pred HHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCcCCeee
Confidence 888877 5667 8999999999999999999999999999 899999999999999999988889888
Q ss_pred cceec--CcceEEecccccccccCCCCCHHHHH---HHHHHHHHhhC-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHH
Q 007212 514 DTVEE--GFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 514 e~v~~--g~~G~~~~~~~~~~~~v~~~d~~~la---~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l 587 (612)
|+.++ ..|||+|| . +++++. .+..+..+-+. .+.++++..+.+...|||... .+|..+|.++
T Consensus 663 Ei~e~vG~~NgF~FG----------~-~~~ev~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L 730 (796)
T 1l5w_A 663 EIAEKVGEENIFIFG----------H-TVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDK-HAFDQMLHSI 730 (796)
T ss_dssp HHHHHHCGGGSEECS----------C-CHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCT-TTTHHHHHHT
T ss_pred ehhhccCCCcEEEec----------C-CHHHHHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcH-HHHHHHHHHH
Confidence 88755 46999984 2 555554 33322222221 246788888888999999986 8899999998
Q ss_pred HH
Q 007212 588 EV 589 (612)
Q Consensus 588 ~~ 589 (612)
+.
T Consensus 731 ~~ 732 (796)
T 1l5w_A 731 GK 732 (796)
T ss_dssp ST
T ss_pred hc
Confidence 64
No 20
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=99.96 E-value=2.5e-28 Score=272.94 Aligned_cols=473 Identities=15% Similarity=0.145 Sum_probs=312.6
Q ss_pred ccccHHHHhhchHHHHHhCCCeEEEEEecCCc-c-------------ccccCc----------cEEEEEEeCCeeeEEEE
Q 007212 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-Y-------------KDAWDT----------DVVIELKVGDKIEKVRF 154 (612)
Q Consensus 99 ~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~-~-------------~~~~~~----------~~~~~~~~~~~~~~~~~ 154 (612)
..||+|........+++..|...+-+.-+|.. + ++.|.. ...+++..+++....-.
T Consensus 112 gnGGLGrLAac~ldS~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~~v~a~~ 191 (796)
T 2c4m_A 112 GNGGLGRLAACFLDSAVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDMKTRAIP 191 (796)
T ss_dssp CCSHHHHHHHHHHHHHHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTEEEEEEE
T ss_pred CCCcHHHHHHHHHHHHHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCccccCCCceeEecCCcEEEEEeCCEEEEEEE
Confidence 58999999999999999999999999887651 1 111211 12233444443222111
Q ss_pred EEeeecC-----ce---EEEEeCc-ccc-cc-------------ccCC-CCCcccCCCCCCCCchhhHHH---HHHHHHH
Q 007212 155 FHCHKRG-----VD---RVFVDHP-WFL-AK-------------VWGK-TQSKIYGPRTGEDYQDNQLRF---SLLCQAA 207 (612)
Q Consensus 155 ~~~~~~g-----v~---~~~v~~~-~~~-~~-------------~~g~-~~~~~y~~~~g~~~~~~~~r~---~~~~~~~ 207 (612)
+.....| +. .+..... .|. +. .+-+ --..+|++.+ .+....+|+ .+|+.++
T Consensus 192 yd~pi~gy~~~~~n~lrlW~a~~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~--~~~Gk~lRL~Qe~ff~~a~ 269 (796)
T 2c4m_A 192 YDMPITGYGTHNVGTLRLWKAEPWEEFDYDAFNAQRFTDAIIERERVSDICRVLYPNDT--TYEGKKLRVRQQYFFTSAS 269 (796)
T ss_dssp EEEEECCTTCCCCEEEEEEEEEESSSSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCS--SHHHHHHHHHHHHHHHHHH
T ss_pred EeccccCcCCCceEEEEEEecccccccchhhccCcchhhhhhchHhhhchhhcCcCCCC--CcchHHHHHHhHHHHHHHH
Confidence 1112212 11 1111111 010 00 0000 0013565322 122234443 5788888
Q ss_pred HHH-hhhhccCCCCccCCCCCCCcEEEEeCCCcccchHH-HHHhhhcCCCCc-------CCceEEEEEecCCcccc--cC
Q 007212 208 LEA-PRILNLNSNKYFSGPYGKKNVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAYQGR--FA 276 (612)
Q Consensus 208 ~~~-~~~l~~~~~~~~~~~~~~pDvVi~~h~~~~~~~~~-~l~~~~~~~~~~-------~~~pvv~~iH~~~~~~~--~~ 276 (612)
++. ++.+..... -|.. +++|| |||+||||+++++. +++.++-..|+- .+..++||+|++.++|. |+
T Consensus 270 lq~ilr~~~~~~~-~l~~-l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp 346 (796)
T 2c4m_A 270 LQAMIQDHLAHHK-DLSN-FAEFH-SVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWD 346 (796)
T ss_dssp HHHHHHHHHHHSS-CSTT-HHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEE
T ss_pred HHHHHHHHHHhCC-Chhh-cCCCe-EEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCC
Confidence 875 554311000 0000 12478 59999999999988 555442111211 36689999999999985 55
Q ss_pred ccccccc---------CCCcccccccccccC------CCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCcc
Q 007212 277 FEDFGLL---------NLPAQFKSSFDFIDG------YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVE 341 (612)
Q Consensus 277 ~~~~~~~---------~l~~~~~~~~~~~~~------~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~ 341 (612)
...+..+ +++..+...+....+ -........+++++.++..|+.|.+||+.+.+.++.. .++ .
T Consensus 347 ~~l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~~-~f~-~ 424 (796)
T 2c4m_A 347 EQIFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKAE-TLA-D 424 (796)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHHT-TTH-H
T ss_pred HHHHHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhhh-hhh-h
Confidence 5544221 111111110000000 0000112367899999999999999999999999852 233 1
Q ss_pred chhhhhccCeEEeeCCccCCCc----CCCcccccccccC-----------------cch------hhhccHHHHHH----
Q 007212 342 LDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD-----------------AST------VMDAKPLLKEA---- 390 (612)
Q Consensus 342 ~~~~~~~~~i~vI~ngvd~~~~----~p~~~~~~~~~~~-----------------~~~------~~~~~~~~~~~---- 390 (612)
.-. ..+.++..|.||||...| +|..++.+...|+ ..+ +.+.|..+|.+
T Consensus 425 ~~~-~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~nK~~L~~~ 503 (796)
T 2c4m_A 425 WYA-LWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAANKQDFAEW 503 (796)
T ss_dssp HHH-HCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHH-cCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 111 234589999999999999 7876666655555 333 34677778888
Q ss_pred HHHHhCCCCCCCCcEEEEEccCccccCHHH-HHHHHHhccc---------CCeEEEEEecCChhHHHH------HHHHHH
Q 007212 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ------LEQLEI 454 (612)
Q Consensus 391 l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~-li~A~~~l~~---------~~~~lvivG~g~~~~~~~------l~~l~~ 454 (612)
+++++|++.+++.+.++++.|+.++||.++ ++..+..+.+ .+++|++.|.+.+.++.. +.+++.
T Consensus 504 l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk~i~~va~ 583 (796)
T 2c4m_A 504 ILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIKLINSIAD 583 (796)
T ss_dssp HHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHHHHHHHHH
Confidence 599999999999999999999999999999 8888887753 379999999988655444 888877
Q ss_pred ------HCCC--ceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--Ccce
Q 007212 455 ------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTG 522 (612)
Q Consensus 455 ------~~~~--~v~~~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G 522 (612)
..++ +|.++..|+..+++.++++||++++||+ +|+||+..+-+|.+|++.|.+-.|...|+.++ ..||
T Consensus 584 ~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e~vG~~Ng 663 (796)
T 2c4m_A 584 LVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVDSVGEENA 663 (796)
T ss_dssp HHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHHHHCGGGS
T ss_pred HhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhhhcCCCcE
Confidence 6777 8999999999999999999999999999 89999999999999999998888888888755 4699
Q ss_pred EEecccccccccCCCCCHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 523 FQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 523 ~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~-~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
|+||. ...++.++..+ .+..+-+. .+.++++..+.+...|||... .+|.++|.+++.
T Consensus 664 F~FG~--------~~~ev~~l~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 664 YIFGA--------RVEELPALRES-YKPYELYETVPGLKRALDALDNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp EEESC--------CTTTHHHHHHT-CCHHHHHHHSTTHHHHHHTTTSSSSCCTTC-CHHHHHHHHHHS
T ss_pred EEecC--------chhhHHHHHHh-hChHHHhhcCHHHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHh
Confidence 99952 23677777665 44433321 135777777778899999988 889999999974
No 21
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.95 E-value=6.6e-27 Score=255.83 Aligned_cols=295 Identities=14% Similarity=0.113 Sum_probs=208.8
Q ss_pred CCcEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCch
Q 007212 228 KKNVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
++| |||+|||+..+++.+++... .++|+++++|...+.. ..+.. ++ .
T Consensus 123 ~~D-iV~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~pfp~~----~~~~~--lp--------------------~ 169 (482)
T 1uqt_A 123 DDD-IIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIPFPTP----EIFNA--LP--------------------T 169 (482)
T ss_dssp TTC-EEEEESGGGTTHHHHHHHTT------CCSCEEEECCSCCCCH----HHHTT--ST--------------------T
T ss_pred CCC-EEEEECchHHHHHHHHHHhC------CCCcEEEEEcCCCCCH----HHHhh--Cc--------------------c
Confidence 358 59999999999999988753 4899999999632210 00010 00 1
Q ss_pred hHHHHHHHhhCCEEEecCHHHHHHHHcCc--CCCccc------hhhhhccCeEEeeCCccCCCcCCCcccccccccCcch
Q 007212 308 INWMKAGILESDMVLTVSPHYAQELVSGE--DKGVEL------DNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 308 ~~~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~G~~~------~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
...+...+..+|.+.+.+..+.+.+.+.. ..+.+. ...-+..++.+||||||++.|.+....
T Consensus 170 ~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~---------- 239 (482)
T 1uqt_A 170 YDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG---------- 239 (482)
T ss_dssp HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS----------
T ss_pred HHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcC----------
Confidence 12233445678998888887777654210 011100 000012479999999998877542100
Q ss_pred hhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C----CeEEEEEecCC-------hhHH
Q 007212 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KPME 446 (612)
Q Consensus 380 ~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~----~~~lvivG~g~-------~~~~ 446 (612)
..... ...++++++ ++++|+++||+++.||++.+++|++.+.+ + +++|+++|.+. ..++
T Consensus 240 --~~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~ 311 (482)
T 1uqt_A 240 --PLPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIR 311 (482)
T ss_dssp --CCCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHH
T ss_pred --cchHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHH
Confidence 00011 346777776 34799999999999999999999999864 2 58899999632 1355
Q ss_pred HHHHHHHHHC----C----CceEEE-eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCC-----ceEEcCCCCc
Q 007212 447 KQLEQLEILY----P----EKARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGL 512 (612)
Q Consensus 447 ~~l~~l~~~~----~----~~v~~~-~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~ 512 (612)
+++++++.+. + ..+.++ +.++.+++..+|+.||++|+||..|+||++++|||+||+ |+|+|+.+|.
T Consensus 312 ~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~ 391 (482)
T 1uqt_A 312 HQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA 391 (482)
T ss_dssp HHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG
T ss_pred HHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC
Confidence 6666665432 1 125554 455788888999999999999999999999999999997 8999998888
Q ss_pred ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHH
Q 007212 513 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 513 ~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l 587 (612)
.+.+. +|+++ +|.|+++++++|.++++++ ++.++++.+++ ....|||+..++++++.|+++
T Consensus 392 ~~~l~---~g~lv----------~p~d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 392 ANELT---SALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp GGTCT---TSEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHhC---CeEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 88872 78876 9999999999999999863 34455555554 246699999999999999876
No 22
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.95 E-value=3.6e-27 Score=263.87 Aligned_cols=215 Identities=14% Similarity=0.082 Sum_probs=168.8
Q ss_pred hCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhC
Q 007212 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 396 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 396 (612)
.+|.++++|+...+ ++ .++.+|||..+.....+... +...++++|
T Consensus 328 ~~d~~i~~s~~~~~-------~~---------~~i~~ipn~~~~~~~~~~~~-------------------~~~~r~~~~ 372 (568)
T 2vsy_A 328 LGDAFALPPALEPF-------YS---------EHVLRLQGAFQPSDTSRVVA-------------------EPPSRTQCG 372 (568)
T ss_dssp EECTTTSCTTTGGG-------CS---------SEEEECSSCSCCCCTTCCCC-------------------CCCCTGGGT
T ss_pred EECCCcCCcccccC-------Cc---------ceeEcCCCcCCCCCCCCCCC-------------------CCCCccccC
Confidence 47888888875432 21 18999999544322111100 112356778
Q ss_pred CCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEe-cCChhHHHHHHHHHHHCC---CceEEEeccChHH
Q 007212 397 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG-TGKKPMEKQLEQLEILYP---EKARGVAKFNIPL 470 (612)
Q Consensus 397 l~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG-~g~~~~~~~l~~l~~~~~---~~v~~~~~~~~~~ 470 (612)
++.+ .+++++||+.+ ||++.+++|+.++.+ ++++|+|+| +|+ ..+.++++..+.+ ++|.+.+..+.++
T Consensus 373 ~~~~---~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~--~~~~l~~~~~~~~l~~~~v~~~g~~~~~~ 446 (568)
T 2vsy_A 373 LPEQ---GVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE--ADARLRAFAHAQGVDAQRLVFMPKLPHPQ 446 (568)
T ss_dssp CCTT---SCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT--HHHHHHHHHHHTTCCGGGEEEECCCCHHH
T ss_pred CCCC---CEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH--HHHHHHHHHHHcCCChhHEEeeCCCCHHH
Confidence 8743 35669999999 999999999999854 799999999 776 6677777776653 5688888888788
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEE-------cCCC-------CcccceecCcceEEecccccccccCC
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV-------ASTG-------GLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~-------s~~g-------g~~e~v~~g~~G~~~~~~~~~~~~v~ 536 (612)
+..+|+.||++|+||.+ ++|++++|||+||+|||+ |+.| |+.|+|.
T Consensus 447 ~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~------------------- 506 (568)
T 2vsy_A 447 YLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNV------------------- 506 (568)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBC-------------------
T ss_pred HHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhc-------------------
Confidence 88999999999999999 999999999999999999 9999 8887653
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH-----HhhcCcHHHHHHHHHHHHHHHHcCCCCC
Q 007212 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGM-----AQDLSWKGPAKKWEETLLNLEVAGSEPG 595 (612)
Q Consensus 537 ~~d~~~la~~i~~ll~~~~~~~~~~~~~~~~-----~~~fsw~~~a~~~~~~y~~l~~~~~~~~ 595 (612)
.|+++++++|.+++++ ++.+.++++++. .+.|||+.++++|+++|++++......|
T Consensus 507 -~~~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~~~~ 567 (568)
T 2vsy_A 507 -ADDAAFVAKAVALASD--PAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRHGWLG 567 (568)
T ss_dssp -SSHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred -CCHHHHHHHHHHHhcC--HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHHhcc
Confidence 2889999999999998 677777777663 3679999999999999999997765544
No 23
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.95 E-value=1e-26 Score=245.78 Aligned_cols=223 Identities=14% Similarity=0.082 Sum_probs=170.4
Q ss_pred HHHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC-ccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 311 MKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 311 ~k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+..+ +.+|.++++|+..++.+.+ +|++.+ ++.+|+|| +|...+.+.... +
T Consensus 143 ~~~~~~~~~d~ii~~s~~~~~~~~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~~------------------~ 195 (375)
T 3beo_A 143 NRQLTGVMADLHFSPTAKSATNLQK---ENKDES------RIFITGNTAIDALKTTVKETY------------------S 195 (375)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC------------------C
T ss_pred hhhHHhhhhheeeCCCHHHHHHHHH---cCCCcc------cEEEECChhHhhhhhhhhhhh------------------h
Confidence 34434 4599999999999999986 576544 89999999 887655432100 1
Q ss_pred HHHHHHhCCCCCCCCcEEEEEccCccc-cCHHHHHHHHHhccc--CCeEEEEEecCC-hhHHHHHHHHHHHCCCceEEEe
Q 007212 389 EALQAEVGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVA 464 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~i~~iGrl~~~-Kg~d~li~A~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~ 464 (612)
..+++++ + ++.++++++||+.+. ||++.+++|++.+.+ +++++++ |.|+ ..+.+.++++... .+++.+.+
T Consensus 196 ~~~~~~~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~-~~~v~~~g 269 (375)
T 3beo_A 196 HPVLEKL--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGD-YGRIHLIE 269 (375)
T ss_dssp CHHHHTT--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTT-CTTEEEEC
T ss_pred HHHHHhc--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhc-cCCEEEeC
Confidence 1233333 2 234578899999876 999999999999865 6888655 6554 3455666665322 24688877
Q ss_pred ccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCcceEEecccccccccCCCCCHHHH
Q 007212 465 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 465 ~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~l 543 (612)
......+..+++.||++|+|| |.+++|||++|+|||+++. ||..|+++++ +|+++ ++ |+++|
T Consensus 270 ~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v----------~~-d~~~l 332 (375)
T 3beo_A 270 PLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLA----------GT-DEETI 332 (375)
T ss_dssp CCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEEC----------CS-CHHHH
T ss_pred CCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEc----------CC-CHHHH
Confidence 777677889999999999999 7789999999999999964 9999999887 99975 65 99999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHH
Q 007212 544 STTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 544 a~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~ 585 (612)
+++|.+++++ ++.+++|++++ +.+.|+|+.+++.++++++
T Consensus 333 a~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 333 FSLADELLSD--KEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHHC--HHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhC--hHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 9999999998 77788887766 3467999999999888763
No 24
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.95 E-value=1.2e-26 Score=246.08 Aligned_cols=231 Identities=16% Similarity=0.094 Sum_probs=173.0
Q ss_pred HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHHHHH
Q 007212 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 315 l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 393 (612)
.+.+|.++++|+..++.+.+ +|++.+ ++.+|+||+ |...+.+... ......+..+++
T Consensus 139 ~~~~d~ii~~s~~~~~~l~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~-------------~~~~~~~~~~~~ 196 (384)
T 1vgv_A 139 GHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQV-------------MSSDKLRSELAA 196 (384)
T ss_dssp HTTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHT-------------TTCHHHHHHHHT
T ss_pred HhhccEEEcCcHHHHHHHHH---cCCChh------hEEEeCChHHHHHHhhhhcc-------------ccchhhhHHHHH
Confidence 34599999999999999886 676544 899999995 4322211000 000001235667
Q ss_pred HhC-CCCCCCCcEEEEEccCccc-cCHHHHHHHHHhccc--CCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccCh
Q 007212 394 EVG-LPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 394 ~~g-l~~~~~~~~i~~iGrl~~~-Kg~d~li~A~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~ 468 (612)
++| ++.+ +.++++++||+.++ ||++.+++|++.+.+ ++++|+++ |.+ +.+.+.++++.... +++.+.+....
T Consensus 197 ~~~~~~~~-~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~-~~~~~~l~~~~~~~-~~v~~~g~~~~ 273 (384)
T 1vgv_A 197 NYPFIDPD-KKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLN-PNVREPVNRILGHV-KNVILIDPQEY 273 (384)
T ss_dssp TCTTCCTT-SEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHHTTC-TTEEEECCCCH
T ss_pred hccccCCC-CCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCC-HHHHHHHHHHhhcC-CCEEEeCCCCH
Confidence 777 6432 33578899999876 999999999999865 68999886 433 34566676664332 46887765555
Q ss_pred HHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCcceEEecccccccccCCCCCHHHHHHHH
Q 007212 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i 547 (612)
+++..+|+.||++|.|| |.+++|||++|+|||+++. |+..|++++| +|+++ ++ |+++|+++|
T Consensus 274 ~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv----------~~-d~~~la~~i 336 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLV----------GT-DKQRIVEEV 336 (384)
T ss_dssp HHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEE----------CS-SHHHHHHHH
T ss_pred HHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEe----------CC-CHHHHHHHH
Confidence 67889999999999999 4458999999999999986 9999999888 99976 66 999999999
Q ss_pred HHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHH
Q 007212 548 RRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 548 ~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
.+++++ ++.+++|++++ +.+.|+|+.+++.++++|.+++.
T Consensus 337 ~~ll~d--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 378 (384)
T 1vgv_A 337 TRLLKD--ENEYQAMSRAHNPYGDGQACSRILEALKNNRISLGS 378 (384)
T ss_dssp HHHHHC--HHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC--
T ss_pred HHHHhC--hHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhcc
Confidence 999998 77788888766 34679999999999988877653
No 25
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.94 E-value=2e-25 Score=214.96 Aligned_cols=184 Identities=30% Similarity=0.506 Sum_probs=157.0
Q ss_pred EeeCCccCCCcC--CCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCc-cccCHHHHHHHHHhcc
Q 007212 353 GIVNGMDVQEWN--PLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFI 429 (612)
Q Consensus 353 vI~ngvd~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~ 429 (612)
.||||+|.+.|. |... .....+..+++++|++. .++|+|+||+. +.||++.+++|+..+.
T Consensus 1 gipngvd~~~f~~~~~~~--------------~~~~~~~~~r~~~~~~~---~~~i~~~G~~~~~~K~~~~li~a~~~l~ 63 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTG--------------SRDERKKSLLSKFGMDE---GVTFMFIGRFDRGQKGVDVLLKAIEILS 63 (200)
T ss_dssp ----CCCTTTSSGGGSCS--------------CHHHHHHHHHHHTTCCS---CEEEEEESCBCSSSSCHHHHHHHHHHHT
T ss_pred CCCCccChhhcccccccc--------------chhhHHHHHHHHcCCCC---CCEEEEeeccccccCCHHHHHHHHHHHH
Confidence 389999999998 7531 11223567899999873 36999999999 9999999999999995
Q ss_pred --c--CCeEEEEEecCChhHHHHHHHHHHHCCCceEE-EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCce
Q 007212 430 --K--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 504 (612)
Q Consensus 430 --~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~-~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~Pv 504 (612)
+ ++++|+|+|.+++.+.+.++++..+++ ++.+ .+..+.+++..+++.||++|+||..|++|++++|||++|+||
T Consensus 64 ~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~Pv 142 (200)
T 2bfw_A 64 SKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIP 142 (200)
T ss_dssp TSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEE
T ss_pred hhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCE
Confidence 3 689999999988667788888888877 7888 888888888899999999999999999999999999999999
Q ss_pred EEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH-hhCHHHHHHHHHHHH
Q 007212 505 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGTQALAEMMKNGM 567 (612)
Q Consensus 505 I~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~-~~~~~~~~~~~~~~~ 567 (612)
|+++.+++.|++ ++.+|+++ ++.|+++++++|.++++ + ++.+.++++++.
T Consensus 143 I~~~~~~~~e~~-~~~~g~~~----------~~~~~~~l~~~i~~l~~~~--~~~~~~~~~~a~ 193 (200)
T 2bfw_A 143 IASAVGGLRDII-TNETGILV----------KAGDPGELANAILKALELS--RSDLSKFRENCK 193 (200)
T ss_dssp EEESCHHHHHHC-CTTTCEEE----------CTTCHHHHHHHHHHHHHCC--HHHHHHHHHHHH
T ss_pred EEeCCCChHHHc-CCCceEEe----------cCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHH
Confidence 999999999999 88999987 88999999999999999 8 777778877763
No 26
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.93 E-value=1.3e-24 Score=235.67 Aligned_cols=294 Identities=13% Similarity=0.135 Sum_probs=213.7
Q ss_pred cEEEEeCCCcccchHHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcCCchhH
Q 007212 230 NVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKIN 309 (612)
Q Consensus 230 DvVi~~h~~~~~~~~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 309 (612)
| +|..||+|..++|.+++.+. .+.++.|.+|-..+.. ..+. -+|.. ...
T Consensus 151 D-~VwVhDYhL~llp~~lR~~~------~~~~igfFlHiPfPs~----e~f~--~Lp~~------------------~r~ 199 (496)
T 3t5t_A 151 P-VYLVHDYQLVGVPALLREQR------PDAPILLFVHIPWPSA----DYWR--ILPKE------------------IRT 199 (496)
T ss_dssp C-EEEEESGGGTTHHHHHHHHC------TTSCEEEECCSCCCCH----HHHT--TSCHH------------------HHH
T ss_pred C-EEEEeCccHhHHHHHHHhhC------CCCeEEEEEcCCCCCH----HHHh--hCcHh------------------HHH
Confidence 6 59999999999999999875 6899999999532211 1111 11110 123
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCc--CC-Cccchh---h----hhccCeEEeeCCccCCCcCCCcccccccccCcch
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGE--DK-GVELDN---I----IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~--~~-G~~~~~---~----~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
.+-.++..+|.|.+.++.+++.+.+.. .. |.+.+. . -+..++.++|+|||++.|.+....
T Consensus 200 ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~---------- 269 (496)
T 3t5t_A 200 GILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ---------- 269 (496)
T ss_dssp HHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC----------
T ss_pred HHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH----------
Confidence 345678899999999999998866421 11 322110 0 122478999999999998765310
Q ss_pred hhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--C---CeEEEEEecC-----C--hhHHH
Q 007212 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E---NVQIIVLGTG-----K--KPMEK 447 (612)
Q Consensus 380 ~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~---~~~lvivG~g-----~--~~~~~ 447 (612)
. +..++++++ ++++|+++||+++.||++.+++|+ ++.+ + ++.|+++|.+ + ..+++
T Consensus 270 ---~----~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l~~ 336 (496)
T 3t5t_A 270 ---L----PEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADYVH 336 (496)
T ss_dssp ---C----CTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHHHH
T ss_pred ---H----HHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHHHH
Confidence 0 145666776 348999999999999999999999 7754 4 3678888742 1 24566
Q ss_pred HHHHHHHHCCC-----ceEEEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcC---CceEEcCCCCcccceecC
Q 007212 448 QLEQLEILYPE-----KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG---TVPIVASTGGLVDTVEEG 519 (612)
Q Consensus 448 ~l~~l~~~~~~-----~v~~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G---~PvI~s~~gg~~e~v~~g 519 (612)
++++++.+.+. .|.+.+..+.+++..+|+.||++++||..||||++.+|||+|| .|+|+|..+|..+.+.
T Consensus 337 ~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~-- 414 (496)
T 3t5t_A 337 RVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG-- 414 (496)
T ss_dssp HHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG--
T ss_pred HHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC--
Confidence 67776544321 4778777788888899999999999999999999999999997 8999999999888884
Q ss_pred cceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 520 FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 520 ~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
.+|+++ +|.|+++++++|.++|+++ .++++++.++. ....++++.-++.+++-+.....+
T Consensus 415 ~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 415 EYCRSV----------NPFDLVEQAEAISAALAAG-PRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp GGSEEE----------CTTBHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcccc
Confidence 368875 9999999999999999984 33344443333 467799999999999988877544
No 27
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=99.93 E-value=2.6e-25 Score=249.45 Aligned_cols=342 Identities=17% Similarity=0.167 Sum_probs=249.3
Q ss_pred CCcEEEEeCCCcccchHH-HHHhhhcCCCCc-------CCceEEEEEecCCcccc--cCcccccccC---------CCcc
Q 007212 228 KKNVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAYQGR--FAFEDFGLLN---------LPAQ 288 (612)
Q Consensus 228 ~pDvVi~~h~~~~~~~~~-~l~~~~~~~~~~-------~~~pvv~~iH~~~~~~~--~~~~~~~~~~---------l~~~ 288 (612)
+||+ ||+||||+++++. +++.++-..++- ....++||+|++.++|. |+...+..+- ++..
T Consensus 320 ~p~v-iHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lLPr~~~ii~~in~~ 398 (824)
T 2gj4_A 320 DKVA-IQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLLPRHLQIIYEINQR 398 (824)
T ss_dssp HHEE-EEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCcE-EEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhCchHHHHHHHHHHH
Confidence 4675 9999999999998 555443222210 23459999999999997 7665553311 0011
Q ss_pred ccc-----------ccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC
Q 007212 289 FKS-----------SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG 357 (612)
Q Consensus 289 ~~~-----------~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng 357 (612)
+.. .+........- ....+++++.++..|+.|.+||+-+.+.++.. .++ +.-. ..+.++..|.||
T Consensus 399 f~~~~~~~~~~~~~~~~~~~~i~~~-~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~~-~f~-~~~~-~~p~k~~~iTNG 474 (824)
T 2gj4_A 399 FLNRVAAAFPGDVDRLRRMSLVEEG-AVKRINMAHLCIAGSHAVNGVARIHSEILKKT-IFK-DFYE-LEPHKFQNKTNG 474 (824)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEECS-SSCEEEHHHHHHHTCSCEEESSHHHHHHHHHT-TTH-HHHH-HCGGGEEECCCC
T ss_pred HHHHHHHHcCCcHHHHHhhhhhhhc-CCCcccHHHHHHHhcCceeeEcHHHHHHHhhH-HhH-HHHH-cChhhcccccCC
Confidence 000 00001111100 12468999999999999999999999999742 233 1111 124589999999
Q ss_pred ccCCCc----CCCcccccccc-----------------cCc-chhh----hccHHHHHH----HHHHhCCCCCCCCcEEE
Q 007212 358 MDVQEW----NPLTDKYIGVK-----------------YDA-STVM----DAKPLLKEA----LQAEVGLPVDRNIPVIG 407 (612)
Q Consensus 358 vd~~~~----~p~~~~~~~~~-----------------~~~-~~~~----~~~~~~~~~----l~~~~gl~~~~~~~~i~ 407 (612)
||...| +|..++.+..+ |.. .++. +.|..+|.+ ++++.|++.+++.+.++
T Consensus 475 I~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g 554 (824)
T 2gj4_A 475 ITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDV 554 (824)
T ss_dssp BCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEE
T ss_pred cChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEe
Confidence 999999 77766555544 554 2331 566777777 88999999999999999
Q ss_pred EEccCccccCHHHH-HHHHHhcc---c-C-----CeEEEEEecCChhHHHH------HHHHHHHC------CC--ceEEE
Q 007212 408 FIGRLEEQKGSDIL-AAAIPHFI---K-E-----NVQIIVLGTGKKPMEKQ------LEQLEILY------PE--KARGV 463 (612)
Q Consensus 408 ~iGrl~~~Kg~d~l-i~A~~~l~---~-~-----~~~lvivG~g~~~~~~~------l~~l~~~~------~~--~v~~~ 463 (612)
++.|+.++||.+++ +..+..+. + + +++|++.|.+.+.++.. +.+++... ++ +|.++
T Consensus 555 ~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl 634 (824)
T 2gj4_A 555 QVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFL 634 (824)
T ss_dssp EESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEE
T ss_pred eeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEE
Confidence 99999999999998 88888774 2 2 67999999988655444 78887754 55 79999
Q ss_pred eccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCccccee--cCcceEEecccccccccCCCCC
Q 007212 464 AKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~~~~~~~~~~~~v~~~d 539 (612)
..|+..+++.++++||++++||+ +|+||++.+-||.+|++.|++-.|...|+.+ ...|||+|| . .
T Consensus 635 ~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG----------~-~ 703 (824)
T 2gj4_A 635 ENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFG----------M-R 703 (824)
T ss_dssp TTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS----------C-C
T ss_pred CCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeC----------C-c
Confidence 99999999999999999999999 8999999999999999999998888888764 346899985 2 2
Q ss_pred HHHHHHHHH-------HHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 540 VAAVSTTVR-------RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 540 ~~~la~~i~-------~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
++++ ..+. .+.+. .+.++++..+.+...|||... .+|.++|.+++.
T Consensus 704 ~~ev-~~l~~~~~~a~~~Y~~--~~~l~~v~d~i~~g~fs~~~~-~~y~~ly~~l~~ 756 (824)
T 2gj4_A 704 VEDV-DRLDQRGYNAQEYYDR--IPELRQIIEQLSSGFFSPKQP-DLFKDIVNMLMH 756 (824)
T ss_dssp HHHH-HHHHHHCCCHHHHHHH--CHHHHHHHHHHHHTTTCTTST-TTTHHHHHHHHH
T ss_pred HHHH-HHHHHcCCCHHHHhcC--CHHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHHc
Confidence 5555 3331 22232 356777777778899999998 889999999974
No 28
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.92 E-value=2.8e-24 Score=200.66 Aligned_cols=159 Identities=16% Similarity=0.170 Sum_probs=133.1
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++..+++.++.+ +..+.+++..+|+.||++|
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v 79 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP--DEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV 79 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST--THHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred eEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc--cHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence 789999999999999999999999965 699999999987 567777777777666776 6667888889999999999
Q ss_pred EcCCCCCCcHHHHHHHHcCC-ceEE-cCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007212 483 IPSRFEPCGLIQLHAMRYGT-VPIV-ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~-PvI~-s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~ 560 (612)
+||.+|+||++++|||++|+ |||+ ++.|+..+++.++.+ ++ ++.|+++++++|.+++++ ++.+.
T Consensus 80 ~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~----------~~~~~~~l~~~i~~l~~~--~~~~~ 145 (166)
T 3qhp_A 80 HAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LF----------EPNNAKDLSAKIDWWLEN--KLERE 145 (166)
T ss_dssp ECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred ECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EE----------cCCCHHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999998 9999 568999999988765 33 889999999999999998 67777
Q ss_pred HHHHHH--HHhhcCcHHHHHH
Q 007212 561 EMMKNG--MAQDLSWKGPAKK 579 (612)
Q Consensus 561 ~~~~~~--~~~~fsw~~~a~~ 579 (612)
++++++ ..++|||+.++++
T Consensus 146 ~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 146 RMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHCChhhhhcC
Confidence 777776 3588999998764
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.90 E-value=7.3e-22 Score=208.96 Aligned_cols=219 Identities=13% Similarity=0.042 Sum_probs=163.4
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCc-cCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
....+|.++++|+..++.+.+ .|++.+ ++.+|+|++ |...+.+. +..++
T Consensus 143 ~~~~~~~~~~~s~~~~~~l~~---~g~~~~------ki~vi~n~~~d~~~~~~~---------------------~~~~~ 192 (376)
T 1v4v_A 143 TDVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDAVLLAAK---------------------LGRLP 192 (376)
T ss_dssp HHHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHHHHHHHH---------------------HCCCC
T ss_pred HHHHhceeeCCCHHHHHHHHH---cCCCcc------eEEEECCchHHHHhhhhh---------------------hhHHH
Confidence 345699999999999999986 576654 899999965 42211000 00011
Q ss_pred HHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccChH
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIP 469 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~ 469 (612)
+++ + ++.++++++||+...||++.+++|++.+.+ ++++++++ |++. ...+.++++... .+++.+.+.....
T Consensus 193 ~~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~~~g~~g~~ 266 (376)
T 1v4v_A 193 EGL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFVLLDPLEYG 266 (376)
T ss_dssp TTC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEEEECCCCHH
T ss_pred Hhc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEEEECCCCHH
Confidence 111 1 234577889999988999999999999865 68998886 6553 355666666433 2468877655555
Q ss_pred HHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHH
Q 007212 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 470 ~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~ 548 (612)
.+..+|+.||++|.|| + |+ ++|||++|+|+|++ +.++..++++++ +|+++ + .|+++|+++|.
T Consensus 267 ~~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv----------~-~d~~~la~~i~ 329 (376)
T 1v4v_A 267 SMAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLA----------G-TDPEGVYRVVK 329 (376)
T ss_dssp HHHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEEC----------C-SCHHHHHHHHH
T ss_pred HHHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEEC----------C-CCHHHHHHHHH
Confidence 6778999999999999 2 44 88999999999987 568888988665 78864 4 59999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 549 RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 549 ~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
+++++ ++.+++|+++ .+.|+|...++++.+.+.+++.
T Consensus 330 ~ll~d--~~~~~~~~~~--~~~~~~~~~~~~i~~~i~~~~~ 366 (376)
T 1v4v_A 330 GLLEN--PEELSRMRKA--KNPYGDGKAGLMVARGVAWRLG 366 (376)
T ss_dssp HHHTC--HHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTT
T ss_pred HHHhC--hHhhhhhccc--CCCCCCChHHHHHHHHHHHHhc
Confidence 99997 7778888864 4678888899999999988875
No 30
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.86 E-value=6.1e-21 Score=180.64 Aligned_cols=141 Identities=16% Similarity=0.210 Sum_probs=125.5
Q ss_pred CCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCCh--hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~--~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
++++|+|+||+.+.||++.+++|+..+ ++++|+|+|.++. .+++.++++...+++++.+.+..+.+++..+++.||
T Consensus 22 ~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad 99 (177)
T 2f9f_A 22 YGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK 99 (177)
T ss_dssp CCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred CCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence 458999999999999999999999998 7899999999873 455555533444566799999999988999999999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhC
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~ 555 (612)
++|+||..|++|++++|||+||+|||+++.++..|++.++.+|++ + +.|+++++++|.++++++.
T Consensus 100 i~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~----------~-~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 100 GLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYL----------V-NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp EEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEE----------E-CSCHHHHHHHHHHHHHCTT
T ss_pred EEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEE----------e-CCCHHHHHHHHHHHHhCHH
Confidence 999999999999999999999999999999999999999999995 4 7899999999999999843
No 31
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.83 E-value=1.5e-18 Score=181.17 Aligned_cols=245 Identities=16% Similarity=0.075 Sum_probs=169.1
Q ss_pred CCCcEEEEeCC-Ccccch-HHHHHhhhcCCCCcCCceEEEEEecCCcccccCcccccccCCCcccccccccccCCCCCcC
Q 007212 227 GKKNVVFVAND-WHTSLI-PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 304 (612)
Q Consensus 227 ~~pDvVi~~h~-~~~~~~-~~~l~~~~~~~~~~~~~pvv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 304 (612)
+++|+||+-+. |+.... ..+++.+.+ .++|+++++|++.+.. +. ...
T Consensus 73 ~~~DvIi~q~P~~~~~~~~~~~~~~lk~-----~~~k~i~~ihDl~pl~-~~---------~~~---------------- 121 (339)
T 3rhz_A 73 RHGDVVIFQTPTWNTTEFDEKLMNKLKL-----YDIKIVLFIHDVVPLM-FS---------GNF---------------- 121 (339)
T ss_dssp CTTCEEEEEECCSSCHHHHHHHHHHHTT-----SSCEEEEEESCCHHHH-CG---------GGG----------------
T ss_pred CCCCEEEEeCCCcchhhHHHHHHHHHHh-----cCCEEEEEecccHHhh-Cc---------cch----------------
Confidence 35797554443 333222 334444321 3899999999886521 10 000
Q ss_pred CchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhcc
Q 007212 305 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 305 ~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
..+..++..++.||.|+++|+.+++.+.+ +|++.. ++.++++. |.. .+..
T Consensus 122 -~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~---~G~~~~------ki~~~~~~-~~~--~~~~----------------- 171 (339)
T 3rhz_A 122 -YLMDRTIAYYNKADVVVAPSQKMIDKLRD---FGMNVS------KTVVQGMW-DHP--TQAP----------------- 171 (339)
T ss_dssp -GGHHHHHHHHTTCSEEEESCHHHHHHHHH---TTCCCS------EEEECCSC-CCC--CCCC-----------------
T ss_pred -hhHHHHHHHHHHCCEEEECCHHHHHHHHH---cCCCcC------ceeecCCC-Ccc--Cccc-----------------
Confidence 12235688899999999999999999987 676533 55443332 211 0000
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEe
Q 007212 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 464 (612)
Q Consensus 385 ~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~ 464 (612)
... ..+.++|+|+|++.....+ ..+ .++++|+|+|+|+.. +++ ++.+.+
T Consensus 172 ----------~~~--~~~~~~i~yaG~l~k~~~L-------~~l-~~~~~f~ivG~G~~~----------~l~-nV~f~G 220 (339)
T 3rhz_A 172 ----------MFP--AGLKREIHFPGNPERFSFV-------KEW-KYDIPLKVYTWQNVE----------LPQ-NVHKIN 220 (339)
T ss_dssp ----------CCC--CEEEEEEEECSCTTTCGGG-------GGC-CCSSCEEEEESCCCC----------CCT-TEEEEE
T ss_pred ----------ccc--cCCCcEEEEeCCcchhhHH-------HhC-CCCCeEEEEeCCccc----------CcC-CEEEeC
Confidence 001 1234799999999953322 222 378999999999843 244 799999
Q ss_pred ccChHHHHHHHHhccEEEEcCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCC
Q 007212 465 KFNIPLAHMIIAGADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 465 ~~~~~~~~~i~~~aDv~v~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~ 537 (612)
.++.++++.+++.+|+.++.... ..+|.+++||||+|+|||+++.+++.++|.++.+|+.+
T Consensus 221 ~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~------------ 288 (339)
T 3rhz_A 221 YRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIV------------ 288 (339)
T ss_dssp CCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEE------------
T ss_pred CCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEe------------
Confidence 99999999999999998887211 25699999999999999999999999999999999975
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhhcCcHHHHHH
Q 007212 538 VDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKK 579 (612)
Q Consensus 538 ~d~~~la~~i~~ll~~~~~~~~~~~~~~~~--~~~fsw~~~a~~ 579 (612)
.+.+++++.|..+. ++.+++|++++. .+.++|...+++
T Consensus 289 ~~~~e~~~~i~~l~----~~~~~~m~~na~~~a~~~~~~~f~k~ 328 (339)
T 3rhz_A 289 KDVEEAIMKVKNVN----EDEYIELVKNVRSFNPILRKGFFTRR 328 (339)
T ss_dssp SSHHHHHHHHHHCC----HHHHHHHHHHHHHHTHHHHTTHHHHH
T ss_pred CCHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 46888988888763 346788888873 466777766555
No 32
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.82 E-value=3e-19 Score=189.58 Aligned_cols=196 Identities=12% Similarity=0.034 Sum_probs=142.1
Q ss_pred HHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+++..++.+|.++++|+..++.+.+ +|++ ++.+|+|+. |.+...+
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~---~g~~--------ki~vi~n~~----f~~~~~~-------------------- 190 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT---FGAK--------RVFSCGNLK----FICQKGK-------------------- 190 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT---TTCC--------SEEECCCGG----GCCCCCS--------------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH---cCCC--------eEEEcCCCc----cCCCcCh--------------------
Confidence 4566788999999999999999986 5654 789999973 2221100
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCC---------
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPE--------- 458 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~--------- 458 (612)
++ .+ ..+++++.|+ ..||++.+++|++.+.+ ++++|+|+|+|+. ..+.++++..+.+-
T Consensus 191 --~~--~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~-~~~~l~~~~~~~gl~~~~~~~~~ 259 (374)
T 2xci_A 191 --GI--KL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIE-NAKIFEKKARDFGFKTSFFENLE 259 (374)
T ss_dssp --CC--CC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGG-GHHHHHHHHHHTTCCEEETTCCC
T ss_pred --hh--hh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHH-HHHHHHHHHHHCCCceEEecCCC
Confidence 00 01 1256777775 46899999999999865 6899999998863 22355566555442
Q ss_pred -ceEEEeccChHHHHHHHHhccEEEEcCCC-CCCcHHHHHHHHcCCceEEc-CCCCcccceecC-cceEEeccccccccc
Q 007212 459 -KARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEG-FTGFQMGSFSVDCEA 534 (612)
Q Consensus 459 -~v~~~~~~~~~~~~~i~~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g-~~G~~~~~~~~~~~~ 534 (612)
++.+ ..+. +++..+|+.||++++||.+ |++|++++|||+||+|||++ +.++..|++.+. .+|+++
T Consensus 260 ~~v~~-~~~~-~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~--------- 328 (374)
T 2xci_A 260 GDVIL-VDRF-GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGF--------- 328 (374)
T ss_dssp SSEEE-CCSS-SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEE---------
T ss_pred CcEEE-ECCH-HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEE---------
Confidence 1222 2222 4456899999999888766 67899999999999999975 789999988763 467765
Q ss_pred CCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 007212 535 VDPVDVAAVSTTVRRALATYGTQALAEMMKNG 566 (612)
Q Consensus 535 v~~~d~~~la~~i~~ll~~~~~~~~~~~~~~~ 566 (612)
.+.|+++|+++|.+++++ . .+++|++++
T Consensus 329 -~~~d~~~La~ai~~ll~d-~--~r~~mg~~a 356 (374)
T 2xci_A 329 -EVKNETELVTKLTELLSV-K--KEIKVEEKS 356 (374)
T ss_dssp -ECCSHHHHHHHHHHHHHS-C--CCCCHHHHH
T ss_pred -EeCCHHHHHHHHHHHHhH-H--HHHHHHHHH
Confidence 778999999999999986 4 344455544
No 33
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.79 E-value=1.2e-17 Score=178.89 Aligned_cols=225 Identities=12% Similarity=0.077 Sum_probs=161.5
Q ss_pred HHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC-ccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 312 KAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 312 k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+..+ ..+|.+++.|+..++.+.+ .|++.+ ++.++.|. +|...+.+.... +.
T Consensus 163 r~~~~~~a~~~~~~se~~~~~l~~---~Gi~~~------~i~vvGn~~~D~~~~~~~~~~------------------~~ 215 (403)
T 3ot5_A 163 RQLTGVMADIHFSPTKQAKENLLA---EGKDPA------TIFVTGNTAIDALKTTVQKDY------------------HH 215 (403)
T ss_dssp HHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHSCTTC------------------CC
T ss_pred HHHHHHhcCEEECCCHHHHHHHHH---cCCCcc------cEEEeCCchHHHHHhhhhhhc------------------ch
Confidence 4434 3589999999999999987 787765 89999884 564433222100 11
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCcc-ccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 466 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~-~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~ 466 (612)
..++++ + ++..++++.||.+. .|+++.+++|+..+.+ +++++++.+...+...+.++++... ..++.+.+..
T Consensus 216 ~~~~~l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~-~~~v~l~~~l 290 (403)
T 3ot5_A 216 PILENL--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGG-HERIHLIEPL 290 (403)
T ss_dssp HHHHSC--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTT-CTTEEEECCC
T ss_pred HHHHhc--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCC-CCCEEEeCCC
Confidence 233333 2 23356667778654 4789999999999865 7899988743223455666654322 2468777777
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCcceEEecccccccccCCCCCHHHHHH
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~ 545 (612)
...+...+++.||++|.+| |...+|||++|+|+|+. +.++..|.++.| +|+++ .+ |++++++
T Consensus 291 ~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv----------~~-d~~~l~~ 353 (403)
T 3ot5_A 291 DAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLI----------GT-NKENLIK 353 (403)
T ss_dssp CHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEEC----------CS-CHHHHHH
T ss_pred CHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEc----------CC-CHHHHHH
Confidence 7667788999999999887 55669999999999999 678888888766 78864 43 9999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~ 589 (612)
++.+++++ ++.+++|+++ ...|.....++++.+++.+.+.
T Consensus 354 ai~~ll~~--~~~~~~m~~~--~~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 354 EALDLLDN--KESHDKMAQA--ANPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHHHHHHC--HHHHHHHHHS--CCTTCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHcC--HHHHHHHHhh--cCcccCCcHHHHHHHHHHHHhC
Confidence 99999998 7777777664 3456777777788887777764
No 34
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.79 E-value=2e-18 Score=184.69 Aligned_cols=160 Identities=15% Similarity=0.057 Sum_probs=120.8
Q ss_pred CCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
+..++++.|++. .++.+.+.++++.+.+.++++++++.+.. ..+.++ ..++++.+.+..+ ...+++.||++
T Consensus 242 ~~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~l~----~~~~~v~~~~~~~---~~~~l~~ad~~ 312 (412)
T 3otg_A 242 RPLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSL-DVSGLG----EVPANVRLESWVP---QAALLPHVDLV 312 (412)
T ss_dssp SCEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSC-CCTTCC----CCCTTEEEESCCC---HHHHGGGCSEE
T ss_pred CCEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCC-Chhhhc----cCCCcEEEeCCCC---HHHHHhcCcEE
Confidence 345778889986 77888888888887666788887776542 111111 2345687776663 45799999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHHhhC
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATYG 555 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~~~~ 555 (612)
|.++ .+.+++|||++|+|+|+...+ +..+.+.+..+|+++ ++. |+++|+++|.+++++
T Consensus 313 v~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~----------~~~~~~~~~l~~ai~~ll~~-- 376 (412)
T 3otg_A 313 VHHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHL----------LPDNISPDSVSGAAKRLLAE-- 376 (412)
T ss_dssp EESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------CGGGCCHHHHHHHHHHHHHC--
T ss_pred EECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHHHHHHHHhC--
Confidence 9765 348999999999999996654 467788888899975 666 899999999999998
Q ss_pred HHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHH
Q 007212 556 TQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 556 ~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~ 586 (612)
++.+++|++.+ +.+.++|+.+++.+++++.+
T Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 377 ESYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 66666676655 56778999999999998754
No 35
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.79 E-value=1.1e-17 Score=178.84 Aligned_cols=229 Identities=14% Similarity=0.057 Sum_probs=159.9
Q ss_pred HHHH-HhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC-ccCCCcCCCcccccccccCcchhhhccHHHH
Q 007212 311 MKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 311 ~k~~-l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 388 (612)
.+.. -+.+|.+++.|+..++.+.+ .|++.+ ++.++.|. +|...+.+... ......+
T Consensus 159 ~r~~~~~~a~~~~~~se~~~~~l~~---~G~~~~------ki~vvGn~~~d~~~~~~~~~-------------~~~~~~~ 216 (396)
T 3dzc_A 159 NRKLTAALTQYHFAPTDTSRANLLQ---ENYNAE------NIFVTGNTVIDALLAVREKI-------------HTDMDLQ 216 (396)
T ss_dssp HHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHH-------------HHCHHHH
T ss_pred HHHHHHHhcCEEECCCHHHHHHHHH---cCCCcC------cEEEECCcHHHHHHHhhhhc-------------ccchhhH
Confidence 3444 45789999999999999986 787765 89999985 44322211000 0000113
Q ss_pred HHHHHHhC-CCCCCCCcEEEEEccCc-cccCHHHHHHHHHhccc--CCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEE
Q 007212 389 EALQAEVG-LPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 389 ~~l~~~~g-l~~~~~~~~i~~iGrl~-~~Kg~d~li~A~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~ 463 (612)
.++++++| ++.+ +..++++.+|.+ ..|+++.+++|+..+.+ +++++++. |.+ +...+.++++... ..++.+.
T Consensus 217 ~~~r~~lg~l~~~-~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~~~-~~~v~~~ 293 (396)
T 3dzc_A 217 ATLESQFPMLDAS-KKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLLKG-VSNIVLI 293 (396)
T ss_dssp HHHHHTCTTCCTT-SEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHTTT-CTTEEEE
T ss_pred HHHHHHhCccCCC-CCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHHcC-CCCEEEe
Confidence 67788888 4433 224455566754 34789999999999865 78999886 544 3455666654322 2467777
Q ss_pred eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCcceEEecccccccccCCCCCHHH
Q 007212 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 542 (612)
......+...+|+.||++|.+| |.+++|||++|+|+|++ +.++..|++++| +++++ . .|+++
T Consensus 294 ~~lg~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv----------~-~d~~~ 356 (396)
T 3dzc_A 294 EPQQYLPFVYLMDRAHIILTDS-----GGIQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLV----------G-TNQQQ 356 (396)
T ss_dssp CCCCHHHHHHHHHHCSEEEESC-----SGGGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEEC----------T-TCHHH
T ss_pred CCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEc----------C-CCHHH
Confidence 6666556668999999999998 34449999999999999 678888998877 56653 3 48999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcHHHHHHHHHHHH
Q 007212 543 VSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 543 la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+++++.+++++ ++.+++|++++ ..|.....++++.+++.
T Consensus 357 l~~ai~~ll~d--~~~~~~m~~~~--~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 357 ICDALSLLLTD--PQAYQAMSQAH--NPYGDGKACQRIADILA 395 (396)
T ss_dssp HHHHHHHHHHC--HHHHHHHHTSC--CTTCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHcC--HHHHHHHhhcc--CCCcCChHHHHHHHHHh
Confidence 99999999998 77788887653 45666677777766553
No 36
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.69 E-value=5.6e-15 Score=156.13 Aligned_cols=160 Identities=13% Similarity=0.053 Sum_probs=104.9
Q ss_pred cEEEEEccCccccCHHHHHHHHHhccc-CCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.++++.|++...+..+.+.++++.+.. .+++++++ |.+. .+ .+.+.....+.++...+ |.. .+..+|+.||++
T Consensus 182 ~ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~-~~~~~~~~~~~~~~v~~-f~~-dm~~~l~~aDlv 256 (365)
T 3s2u_A 182 NLLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH--AE-ITAERYRTVAVEADVAP-FIS-DMAAAYAWADLV 256 (365)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT--HH-HHHHHHHHTTCCCEEES-CCS-CHHHHHHHCSEE
T ss_pred EEEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc--cc-cccceeccccccccccc-chh-hhhhhhccceEE
Confidence 355666788888888999999999865 45665543 4333 33 33333344554555444 333 355799999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccceecCcceEEecccccccccCCC--CCHHHHHHHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRAL 551 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~~~~~~~~~~~~v~~--~d~~~la~~i~~ll 551 (612)
|.-+ -++++.|+|++|+|+|....+.. .+.+.+.+.|+++ +. .++++|+++|.+++
T Consensus 257 I~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l----------~~~~~~~~~L~~~i~~ll 322 (365)
T 3s2u_A 257 ICRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL----------PQKSTGAAELAAQLSEVL 322 (365)
T ss_dssp EECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred EecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe----------ecCCCCHHHHHHHHHHHH
Confidence 9543 36889999999999998775432 2344555578765 43 36899999999999
Q ss_pred HhhCHHHHHHHHHHHHH--hhcCcHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNGMA--QDLSWKGPAKKWEETL 584 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y 584 (612)
+| ++.+++|++++.. .....+.+++.++++.
T Consensus 323 ~d--~~~~~~m~~~a~~~~~~~aa~~ia~~i~~la 355 (365)
T 3s2u_A 323 MH--PETLRSMADQARSLAKPEATRTVVDACLEVA 355 (365)
T ss_dssp HC--THHHHHHHHHHHHTCCTTHHHHHHHHHHHHC
T ss_pred CC--HHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 98 7788889888742 2233444444444433
No 37
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.66 E-value=4.6e-15 Score=159.72 Aligned_cols=161 Identities=13% Similarity=0.075 Sum_probs=112.0
Q ss_pred CCcEEEEEccCccccCHHHHHHHHHhccc-CCeEE-EEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d~li~A~~~l~~-~~~~l-vivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
+.++++++|++. .++.+.+.++++.+.+ +++++ +++|.+... +.++ ..++++.+.+..+.. .+++.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~--~~l~----~~~~~v~~~~~~~~~---~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP--AELG----ELPDNVEVHDWVPQL---AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CG--GGGC----SCCTTEEEESSCCHH---HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh--HHhc----cCCCCeEEEecCCHH---HHhhccC
Confidence 346888999998 5666666555555544 57888 467876521 1121 245568777665544 5899999
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~~ 553 (612)
++|..+- +++++|||++|+|+|+...++ ..+.+.+.+.|+.+ ++. |+++++++|.+++++
T Consensus 302 ~~v~~~G----~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~ 367 (430)
T 2iyf_A 302 LFVTHAG----AGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKL----------ATEEATADLLRETALALVDD 367 (430)
T ss_dssp EEEECCC----HHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CCC-CCHHHHHHHHHHHHHC
T ss_pred EEEECCC----ccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEc----------CCCCCCHHHHHHHHHHHHcC
Confidence 9997652 378999999999999998755 45666677789875 555 899999999999997
Q ss_pred hCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHHHH
Q 007212 554 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 554 ~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~l~ 588 (612)
++.++++++.+ +.+.++++.+++.+++++.+..
T Consensus 368 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 368 --PEVARRLRRIQAEMAQEGGTRRAADLIEAELPARH 402 (430)
T ss_dssp --HHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC--
T ss_pred --HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhccc
Confidence 55555555554 3456799999998888776544
No 38
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.65 E-value=1.3e-15 Score=162.37 Aligned_cols=153 Identities=14% Similarity=0.115 Sum_probs=101.0
Q ss_pred CCcEEEEEccCcccc----------CHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007212 402 NIPVIGFIGRLEEQK----------GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 402 ~~~~i~~iGrl~~~K----------g~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~ 471 (612)
..++++++|++...| .++.+++++..+ ++++++++.+.. .+.+. ..++++.+.+..+ .
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~---~ 294 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL--AQTLQ----PLPEGVLAAGQFP---L 294 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEEEESCCC---H
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc--hhhhc----cCCCcEEEeCcCC---H
Confidence 346788899996544 466677776665 789998887652 22222 3456788777654 3
Q ss_pred HHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEE----cCCCCcccceecCcceEEecccccccccCCCC--CHHHHHH
Q 007212 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVST 545 (612)
Q Consensus 472 ~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~ 545 (612)
..+++.||++|. ++-+.+++|||++|+|+|+ .+..+..+.+.+.+.|+++ ++. |+++|++
T Consensus 295 ~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~ 360 (398)
T 4fzr_A 295 SAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEV----------PWEQAGVESVLA 360 (398)
T ss_dssp HHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEEC----------C-------CHHH
T ss_pred HHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHH
Confidence 468999999994 4447899999999999999 4555777888888899975 655 7899999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHH
Q 007212 546 TVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 546 ~i~~ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~ 582 (612)
+|.+++++ +..++++.+.+ +....+|+.+++.+++
T Consensus 361 ai~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 361 ACARIRDD--SSYVGNARRLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHHC--THHHHHHHHHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHHhC--HHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 99999998 55566665554 5677899988887653
No 39
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.59 E-value=1.4e-14 Score=153.84 Aligned_cols=158 Identities=14% Similarity=0.134 Sum_probs=110.1
Q ss_pred CcEEEEEccCccccCH-HHHHHHHHhccc-CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRLEEQKGS-DILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~-d~li~A~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
..++++.|++...|+. ..+++++.+..+ ++++++++|.+.. .+.+. ..+.++.+.+..+.. .+++.||+
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~ad~ 289 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH--RALLT----DLPDNARIAESVPLN---LFLRTCEL 289 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG--GGGCT----TCCTTEEECCSCCGG---GTGGGCSE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc--hhhcc----cCCCCEEEeccCCHH---HHHhhCCE
Confidence 3567778998765433 555555544433 5899999987652 11121 235567766655443 36799999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEc----CCCCcccceecCcceEEecccccccccCCC----CCHHHHHHHHHHHHH
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDP----VDVAAVSTTVRRALA 552 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~----~d~~~la~~i~~ll~ 552 (612)
+|.. +-+.+++|||++|+|+|+. +..+..+.+.+.+.|+++ ++ .|+++|+++|.++++
T Consensus 290 ~v~~----~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 290 VICA----GGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICL----------PDEQAQSDHEQFTDSIATVLG 355 (391)
T ss_dssp EEEC----CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEEC----------CSHHHHTCHHHHHHHHHHHHT
T ss_pred EEeC----CCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEec----------CcccccCCHHHHHHHHHHHHc
Confidence 9953 4457999999999999994 445566778888899975 66 689999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 553 ~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~ 585 (612)
+ +..++++.+.+ +....+++.+++.+++++.
T Consensus 356 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 356 D--TGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp C--THHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred C--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 8 45555555544 5677899988888776543
No 40
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.57 E-value=3.1e-13 Score=143.48 Aligned_cols=157 Identities=15% Similarity=0.064 Sum_probs=108.2
Q ss_pred CCcEEEEEccCcccc--CHHHHHHHHHhcccCCeEEEE-EecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 402 NIPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~i~~iGrl~~~K--g~d~li~A~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
...++++.|+....+ .+..+++++..+ ++++++ +|.+.. .+.++ ..+.++.+.+..+.. .+++.|
T Consensus 231 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~--~~~~~----~~~~~v~~~~~~~~~---~ll~~a 298 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHPEFFRACAQAFADT---PWHVVMAIGGFLD--PAVLG----PLPPNVEAHQWIPFH---SVLAHA 298 (402)
T ss_dssp CCEEEEECCSCSSCCHHHHHHHHHHHTTS---SCEEEEECCTTSC--GGGGC----SCCTTEEEESCCCHH---HHHTTE
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHhcC---CcEEEEEeCCcCC--hhhhC----CCCCcEEEecCCCHH---HHHhhC
Confidence 346778889987654 345555555443 577666 455431 11111 245567776655544 689999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcC-----CCCcccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVAS-----TGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~-----~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll 551 (612)
|++|..+- ..+++|||++|+|+|+.. ..+..+.+.+.+.|..+ .++ |+++++++|.+++
T Consensus 299 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~~~~ll 364 (402)
T 3ia7_A 299 RACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL----------RPDQLEPASIREAVERLA 364 (402)
T ss_dssp EEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC----------CGGGCSHHHHHHHHHHHH
T ss_pred CEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc----------cCCCCCHHHHHHHHHHHH
Confidence 99997653 378899999999999544 44667777788889865 554 8999999999999
Q ss_pred HhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~ 586 (612)
++ ++.++++.+.+ +....+++..++.+++++.+
T Consensus 365 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 365 AD--SAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HC--HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 98 55555554443 45668888888888887764
No 41
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.56 E-value=1.1e-13 Score=147.40 Aligned_cols=153 Identities=13% Similarity=0.091 Sum_probs=109.6
Q ss_pred CcEEEEEccCccc-cCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 403 IPVIGFIGRLEEQ-KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 403 ~~~i~~iGrl~~~-Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.++++++|++... ++.+.+.++++.+.+.++++++++++.. .+.+. ..+.++.+.+..+. ..+++.||++
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--~~~l~----~~~~~v~~~~~~~~---~~ll~~ad~~ 303 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--ISPLG----TLPRNVRAVGWTPL---HTLLRTCTAV 303 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--CGGGC----SCCTTEEEESSCCH---HHHHTTCSEE
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--hhhhc----cCCCcEEEEccCCH---HHHHhhCCEE
Confidence 4678889999655 4655565555555445899999987652 11111 34567877766643 3589999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEE----cCCCCcc--cceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHHh
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLV--DTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~--e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~~ 553 (612)
|.. +-+.+++|||++|+|+|+ .+..+.. +.+.+.+.|+.+ ++. +.++++ +++++
T Consensus 304 v~~----~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~----------~~~~~~~~~l~----~ll~~ 365 (398)
T 3oti_A 304 VHH----GGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVS----------TSDKVDADLLR----RLIGD 365 (398)
T ss_dssp EEC----CCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEEC----------CGGGCCHHHHH----HHHHC
T ss_pred EEC----CCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEee----------CCCCCCHHHHH----HHHcC
Confidence 953 446799999999999999 6678888 888888899975 554 566666 77877
Q ss_pred hCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHH
Q 007212 554 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 554 ~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y 584 (612)
+..++++.+.+ +....+|+.+++.+++++
T Consensus 366 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 366 --ESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp --HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 55555565554 567889999998888765
No 42
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.47 E-value=4.3e-12 Score=135.63 Aligned_cols=157 Identities=14% Similarity=0.034 Sum_probs=106.4
Q ss_pred CCcEEEEEccCcccc--CHHHHHHHHHhcccCCeEEEE-EecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 402 NIPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~i~~iGrl~~~K--g~d~li~A~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
...++++.|++.... .+..+++++..+ ++++++ +|.+.. .+.++ ..+.++...+..+.. .+++.|
T Consensus 247 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~a 314 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQ---PWHVVMTLGGQVD--PAALG----DLPPNVEAHRWVPHV---KVLEQA 314 (415)
T ss_dssp CCEEEEECTTTSCCCHHHHHHHHHHHTTS---SCEEEEECTTTSC--GGGGC----CCCTTEEEESCCCHH---HHHHHE
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHhcC---CcEEEEEeCCCCC--hHHhc----CCCCcEEEEecCCHH---HHHhhC
Confidence 346778889986433 245555555444 588877 565431 11111 245567776555543 689999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEc----CCCCcccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 552 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~ 552 (612)
|++|..+- ..+++|||++|+|+|+. +.....+.+.+.+.|..+ ... ++++++++|.++++
T Consensus 315 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~ 380 (415)
T 3rsc_A 315 TVCVTHGG----MGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVL----------PGEKADGDTLLAAVGAVAA 380 (415)
T ss_dssp EEEEESCC----HHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEEC----------CGGGCCHHHHHHHHHHHHT
T ss_pred CEEEECCc----HHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEc----------ccCCCCHHHHHHHHHHHHc
Confidence 99997642 36889999999999994 444566677777788865 544 89999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHHH
Q 007212 553 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 553 ~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~~ 586 (612)
+ ++.++++.+.+ +....+++..++.+++++.+
T Consensus 381 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 381 D--PALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp C--HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 8 55555554443 45667888888888877654
No 43
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.45 E-value=1.2e-11 Score=130.72 Aligned_cols=153 Identities=13% Similarity=0.109 Sum_probs=106.3
Q ss_pred CcEEEEEccCccc-------cCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007212 403 IPVIGFIGRLEEQ-------KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 403 ~~~i~~iGrl~~~-------Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~ 475 (612)
..++++.|++... +.++.+++++..+ ++++++++.+. ..+.++. .++++.. +..+. ..++
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~--~~~~l~~----~~~~v~~-~~~~~---~~~l 277 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPDT--VAEALRA----EVPQARV-GWTPL---DVVA 277 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCHH--HHHHHHH----HCTTSEE-ECCCH---HHHG
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCCC--CHHhhCC----CCCceEE-cCCCH---HHHH
Confidence 3688899999865 6788888888765 78888875432 2222322 3556776 55443 3588
Q ss_pred HhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHH
Q 007212 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRR 549 (612)
Q Consensus 476 ~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ 549 (612)
+.||++|..+ -+++++|||++|+|+|+...++ ..+.+.+.+.|+.+ ++. +.++++++|.+
T Consensus 278 ~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ 343 (384)
T 2p6p_A 278 PTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL----------LPGEDSTEAIADSCQE 343 (384)
T ss_dssp GGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTCCCHHHHHHHHHH
T ss_pred hhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEec----------CcCCCCHHHHHHHHHH
Confidence 9999999763 3468999999999999998743 56667676788865 543 79999999999
Q ss_pred HHHhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHH
Q 007212 550 ALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y 584 (612)
++++ ++.++++.+.+ +...-.-+..++.+++++
T Consensus 344 ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 344 LQAK--DTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHcC--HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 9998 55555555544 334445555665555544
No 44
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.43 E-value=2.4e-12 Score=136.77 Aligned_cols=194 Identities=20% Similarity=0.137 Sum_probs=136.0
Q ss_pred HHHH-hhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCC-ccCCCcCCCcccccccccCcchhhhccHHHHH
Q 007212 312 KAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 312 k~~l-~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 389 (612)
+..+ ..+|.+++.|+..++.+.+ .|++.+ +|.++.|. +|...+. .....+.
T Consensus 140 R~~~~~~a~~~~~~te~~~~~l~~---~G~~~~------~I~vtGnp~~D~~~~~------------------~~~~~~~ 192 (385)
T 4hwg_A 140 RKIIDHISDVNITLTEHARRYLIA---EGLPAE------LTFKSGSHMPEVLDRF------------------MPKILKS 192 (385)
T ss_dssp HHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCSHHHHHHHH------------------HHHHHHC
T ss_pred HHHHHhhhceeecCCHHHHHHHHH---cCCCcC------cEEEECCchHHHHHHh------------------hhhcchh
Confidence 3343 4689999999999999987 787765 88888874 3422110 0112345
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCc---cccCHHHHHHHHHhcccC-CeEEEEEecCChhHHHHHHHH-H-HHCCCceEEE
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQL-E-ILYPEKARGV 463 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~---~~Kg~d~li~A~~~l~~~-~~~lvivG~g~~~~~~~l~~l-~-~~~~~~v~~~ 463 (612)
++++++|++. +..+++..||.+ ..|+++.+++|+..+.+. ++++++... +...+.++++ . .....++...
T Consensus 193 ~~~~~lgl~~--~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~ 268 (385)
T 4hwg_A 193 DILDKLSLTP--KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFL 268 (385)
T ss_dssp CHHHHTTCCT--TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEEC
T ss_pred HHHHHcCCCc--CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEE
Confidence 6788899874 335666777754 347899999999998643 777777543 3355555554 2 2112357766
Q ss_pred eccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCcceEEecccccccccCCCCCHHH
Q 007212 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 542 (612)
..+.......+++.||+++.+| |.++.||+++|+|+|+.... +.+|.++.| +++++ +.|.++
T Consensus 269 ~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv-----------~~d~~~ 331 (385)
T 4hwg_A 269 PAFSFTDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMS-----------GFKAER 331 (385)
T ss_dssp CCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEEC-----------CSSHHH
T ss_pred cCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEc-----------CCCHHH
Confidence 6666666778999999999776 56789999999999998653 357777765 56643 358999
Q ss_pred HHHHHHHHHHh
Q 007212 543 VSTTVRRALAT 553 (612)
Q Consensus 543 la~~i~~ll~~ 553 (612)
+++++.+++++
T Consensus 332 i~~ai~~ll~d 342 (385)
T 4hwg_A 332 VLQAVKTITEE 342 (385)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhC
Confidence 99999999987
No 45
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.24 E-value=1.3e-10 Score=125.45 Aligned_cols=155 Identities=15% Similarity=0.090 Sum_probs=107.4
Q ss_pred CcEEEEEccCcc-----ccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007212 403 IPVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 403 ~~~i~~iGrl~~-----~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~ 477 (612)
..++++.|++.. .+.++.+++++..+ ++++++.+.+.. . +.++ ..++++......+. ..++..
T Consensus 268 ~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~-~-~~l~----~~~~~v~~~~~~~~---~~ll~~ 335 (441)
T 2yjn_A 268 RRVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ-L-EGVA----NIPDNVRTVGFVPM---HALLPT 335 (441)
T ss_dssp CEEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT-T-SSCS----SCCSSEEECCSCCH---HHHGGG
T ss_pred CEEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc-h-hhhc----cCCCCEEEecCCCH---HHHHhh
Confidence 357888999875 48899999999876 788888765441 1 1111 24556776665554 257899
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll 551 (612)
||++|.. +-+.+++|||++|+|+|+....+ ..+.+.+.+.|+.+ +.. ++++++++|.+++
T Consensus 336 ad~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll 401 (441)
T 2yjn_A 336 CAATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIAL----------PVPELTPDQLRESVKRVL 401 (441)
T ss_dssp CSEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred CCEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEc----------ccccCCHHHHHHHHHHHh
Confidence 9999963 34579999999999999998743 55666666788865 544 8999999999999
Q ss_pred HhhCHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHH
Q 007212 552 ATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~ 585 (612)
++ +..++++.+.+ +....+++.+++.+++++.
T Consensus 402 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 402 DD--PAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp HC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 98 55555555543 4566778888877776653
No 46
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.20 E-value=3.6e-09 Score=113.31 Aligned_cols=158 Identities=9% Similarity=0.002 Sum_probs=100.1
Q ss_pred CCcEEEEEccCccccCHHHHHHHHHhcccCCeEEE-EEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
+..++++.|++. .+..+.+.++++.+.+.+++++ ++|.+... +.+ ...++++......+.. .+++.||+
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--~~~----~~~~~~v~~~~~~~~~---~~l~~~d~ 324 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP--ADL----GEVPPNVEVHQWVPQL---DILTKASA 324 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCG--GGG----CSCCTTEEEESSCCHH---HHHTTCSE
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCCh--HHh----ccCCCCeEEecCCCHH---HHHhhCCE
Confidence 346778889987 3444444444444444577875 45765421 111 1245567766655543 58999999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHHHhh
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATY 554 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll~~~ 554 (612)
+|..+ -..+++|||++|+|+|+....+ ..+.+.+.+.|+.+ +.. +.++++++|++++++
T Consensus 325 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~- 389 (424)
T 2iya_A 325 FITHA----GMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHI----------PRDQVTAEKLREAVLAVASD- 389 (424)
T ss_dssp EEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHHHHHC-
T ss_pred EEECC----chhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHHcC-
Confidence 88642 2378999999999999997643 34455566678865 443 889999999999987
Q ss_pred CHHHHHHHHHHH--HHhhcCcHHHHHHHHHHHH
Q 007212 555 GTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 555 ~~~~~~~~~~~~--~~~~fsw~~~a~~~~~~y~ 585 (612)
++.++++.+.+ +......+..++.+++++.
T Consensus 390 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 421 (424)
T 2iya_A 390 -PGVAERLAAVRQEIREAGGARAAADILEGILA 421 (424)
T ss_dssp -HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 44444444433 3334455556666555543
No 47
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=99.15 E-value=1.1e-08 Score=114.51 Aligned_cols=292 Identities=19% Similarity=0.211 Sum_probs=193.4
Q ss_pred CcEEEEeCCCcccchHHHHHhhh-cCCCCc-------CCceEEEEEecCCccc--ccCcccccccCCC------------
Q 007212 229 KNVVFVANDWHTSLIPCYLKTMY-KPKGMY-------KSAKVVFCIHNIAYQG--RFAFEDFGLLNLP------------ 286 (612)
Q Consensus 229 pDvVi~~h~~~~~~~~~~l~~~~-~~~~~~-------~~~pvv~~iH~~~~~~--~~~~~~~~~~~l~------------ 286 (612)
+. +||.||-|.+++..-+-+.+ -..|+- ...-++||-|.+.+.+ +|+...+..+ +|
T Consensus 360 ~~-~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~l-Lpr~~~II~ein~~ 437 (879)
T 1ygp_A 360 QV-AIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHL-LPRHLEIIYDINWF 437 (879)
T ss_dssp HE-EEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred ce-EEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHH-CCcHHHHHHHHHHH
Confidence 45 59999988887666544332 222221 1347999999987754 2443332221 11
Q ss_pred ----------c--ccccccccccCCCCCcCCchhHHHHHHHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEe
Q 007212 287 ----------A--QFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 354 (612)
Q Consensus 287 ----------~--~~~~~~~~~~~~~~~~~~~~~~~~k~~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI 354 (612)
. .....+..++.-. ..+.+++-..++..|..|..||.-+.+.+.+.. -.+...+++..++.-+
T Consensus 438 f~~~~~~~~~~d~~~~~~l~ii~~~~---~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~--f~df~~l~P~~kf~n~ 512 (879)
T 1ygp_A 438 FLEDVAKKFPKDVDLLSRISIIEENS---PERQIRMAFLAIVGSHKVNGVVELHSELIKTTI--FKDFIKFYGPSKFVNV 512 (879)
T ss_dssp HHHHHHHHSTTCTHHHHHHCSEECCS---SSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTT--THHHHHHHCGGGEEEC
T ss_pred HHHHHHHHcCCCHHHHHhcceeccCC---CcceeehHHHHHHhcCceeEehHHHHHHHHHHH--hHHHHHhCCCCcccCc
Confidence 0 0000011111100 003567777789999999999999988885421 1112233333388999
Q ss_pred eCCccCCCcC----CCcc----cccc---ccc--Cc----------------chhhhccHHHHHHH----HHHh-CCCCC
Q 007212 355 VNGMDVQEWN----PLTD----KYIG---VKY--DA----------------STVMDAKPLLKEAL----QAEV-GLPVD 400 (612)
Q Consensus 355 ~ngvd~~~~~----p~~~----~~~~---~~~--~~----------------~~~~~~~~~~~~~l----~~~~-gl~~~ 400 (612)
.|||.+..|- |.-. ..+. ..+ ++ ..+.+.|..+|..| ++.. |+..+
T Consensus 513 TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld 592 (879)
T 1ygp_A 513 TNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDII 592 (879)
T ss_dssp CCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCS
T ss_pred CCCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEec
Confidence 9999888884 2210 0011 001 11 12334555555554 5566 88878
Q ss_pred -----CCCcEEEEEccCccccCHHH-HHHHHHhccc------------------CCeEEEEEecCC------hhHHHHHH
Q 007212 401 -----RNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK------------------ENVQIIVLGTGK------KPMEKQLE 450 (612)
Q Consensus 401 -----~~~~~i~~iGrl~~~Kg~d~-li~A~~~l~~------------------~~~~lvivG~g~------~~~~~~l~ 450 (612)
++...++++-|+.++|...+ ++..+..+.+ .++++++.|... +.+.+.+.
T Consensus 593 ~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~ 672 (879)
T 1ygp_A 593 NREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLIN 672 (879)
T ss_dssp CSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHH
Confidence 78899999999999999998 6666554421 368899988754 34555666
Q ss_pred HHHH------HCCC--ceEEEeccChHHHHHHHHhccEEEEcCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec--
Q 007212 451 QLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-- 518 (612)
Q Consensus 451 ~l~~------~~~~--~v~~~~~~~~~~~~~i~~~aDv~v~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-- 518 (612)
+++. ...+ +|.|+..|+...+..++.+||+....|+ .|++|..=+-+|..|.+.|.+-.|...|+.++
T Consensus 673 ~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG 752 (879)
T 1ygp_A 673 CVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIG 752 (879)
T ss_dssp HHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHC
T ss_pred HHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcC
Confidence 6654 2334 7999999999999999999999999998 49999999999999999999999999999876
Q ss_pred CcceEEecc
Q 007212 519 GFTGFQMGS 527 (612)
Q Consensus 519 g~~G~~~~~ 527 (612)
..|+|+||.
T Consensus 753 ~eN~fiFG~ 761 (879)
T 1ygp_A 753 EDNVFLFGN 761 (879)
T ss_dssp GGGSEEESC
T ss_pred cccEEEccC
Confidence 469999995
No 48
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.08 E-value=3.9e-10 Score=119.53 Aligned_cols=153 Identities=16% Similarity=0.114 Sum_probs=90.7
Q ss_pred CcEEEEEccCcccc-CHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 403 IPVIGFIGRLEEQK-GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 403 ~~~i~~iGrl~~~K-g~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.++++..|++...+ +.+.+.+++..+.+.+.++++.+.+...- .....++++......+.. .++..||++
T Consensus 238 ~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~------~~~~~~~~v~~~~~~p~~---~lL~~~~~~ 308 (400)
T 4amg_A 238 RRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA------LLGELPANVRVVEWIPLG---ALLETCDAI 308 (400)
T ss_dssp CEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC------CCCCCCTTEEEECCCCHH---HHHTTCSEE
T ss_pred cEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc------ccccCCCCEEEEeecCHH---HHhhhhhhe
Confidence 35667788876544 44556666666666678887766543110 012245667766665543 478999998
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ 557 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~ 557 (612)
|.- +-..+++|||++|+|+|+....+ ..+.+.+.+.|+.. +.. +..+++|++++++ +.
T Consensus 309 v~h----~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l----------~~~--~~~~~al~~lL~d--~~ 370 (400)
T 4amg_A 309 IHH----GGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA----------EAG--SLGAEQCRRLLDD--AG 370 (400)
T ss_dssp EEC----CCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC----------CTT--TCSHHHHHHHHHC--HH
T ss_pred ecc----CCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc----------CCC--CchHHHHHHHHcC--HH
Confidence 843 34568999999999999865433 44555555677754 333 3457889999998 33
Q ss_pred HHHHHHHH--HHHhhcCcHHHHHHHHH
Q 007212 558 ALAEMMKN--GMAQDLSWKGPAKKWEE 582 (612)
Q Consensus 558 ~~~~~~~~--~~~~~fsw~~~a~~~~~ 582 (612)
.++++.+- .++..=+....++.+++
T Consensus 371 ~r~~a~~l~~~~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 371 LREAALRVRQEMSEMPPPAETAAXLVA 397 (400)
T ss_dssp HHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 32222221 13333355555555554
No 49
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.01 E-value=1.7e-08 Score=107.61 Aligned_cols=125 Identities=13% Similarity=0.080 Sum_probs=86.1
Q ss_pred CcEEEEEccCc-cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 403 IPVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 403 ~~~i~~iGrl~-~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.+++++.|++. ..+.++.+++++..+ ++++++.+.... .. . ...+.++......+.. .++..||++
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~-~~----~--~~~~~~v~~~~~~~~~---~ll~~~d~~ 288 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAG-LG----R--IDEGDDCLVVGEVNHQ---VLFGRVAAV 288 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTT-CC----C--SSCCTTEEEESSCCHH---HHGGGSSEE
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcc-cc----c--ccCCCCEEEecCCCHH---HHHhhCcEE
Confidence 46788889998 677788888888876 677777654321 10 0 1234567776655543 478999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEcCCCCc----ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
|..+- ..++.||+++|+|+|+....+- .+.+.+.+.|..+ .....+.++++++|.++++
T Consensus 289 v~~gG----~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l--------~~~~~~~~~l~~ai~~ll~ 351 (404)
T 3h4t_A 289 VHHGG----AGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAH--------DGPTPTVESLSAALATALT 351 (404)
T ss_dssp EECCC----HHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC--------SSSSCCHHHHHHHHHHHTS
T ss_pred EECCc----HHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEecc--------CcCCCCHHHHHHHHHHHhC
Confidence 95542 3789999999999999865442 2345555677764 1122378999999999987
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.88 E-value=1.7e-08 Score=111.34 Aligned_cols=179 Identities=12% Similarity=0.122 Sum_probs=122.5
Q ss_pred HHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEE--EEecCC---hhHHHHHHHHHHHCCCceEEEec
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQII--VLGTGK---KPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lv--ivG~g~---~~~~~~l~~l~~~~~~~v~~~~~ 465 (612)
..++++.+.+.++++..+++ .|..+.+++++.++.+ |+..++ ++|.+. ....+++.+.... +++.+.+.
T Consensus 431 ~~~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~--~Rv~F~g~ 506 (631)
T 3q3e_A 431 VDYLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLG--DSATAHPH 506 (631)
T ss_dssp CCCCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHG--GGEEEECC
T ss_pred ccccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCC--ccEEEcCC
Confidence 34567754445778888875 7889999999998876 665553 357432 2333344444433 46888888
Q ss_pred cChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCccccee------cCcceEEecccccccccCCCCC
Q 007212 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 466 ~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~------~g~~G~~~~~~~~~~~~v~~~d 539 (612)
.+.++....++.+|+++-|+.+++ |++.+|||++|+|||+....++..-+. -|..+++ -..|
T Consensus 507 ~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~L-----------IA~d 574 (631)
T 3q3e_A 507 SPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWL-----------IANT 574 (631)
T ss_dssp CCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGG-----------EESS
T ss_pred CCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCcce-----------ecCC
Confidence 887777789999999999998755 999999999999999977665554432 1223321 1257
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHh---hcCcHHHHHHHHHHHHHHHH
Q 007212 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQ---DLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 540 ~~~la~~i~~ll~~~~~~~~~~~~~~~~~~---~fsw~~~a~~~~~~y~~l~~ 589 (612)
.++.++...++.+| ++.+.+++++.... ..-|+...++|++.|+++..
T Consensus 575 ~eeYv~~Av~La~D--~~~l~~LR~~Lr~~~~~spLFd~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 575 VDEYVERAVRLAEN--HQERLELRRYIIENNGLNTLFTGDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHHHHHHHHHHHC--HHHHHHHHHHHHHSCCHHHHTCSCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHHHhhhCCCcchhHHHHHHHHHHHHH
Confidence 89999999999998 77777776665322 11222445666666665554
No 51
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.79 E-value=3.4e-08 Score=91.81 Aligned_cols=122 Identities=10% Similarity=0.052 Sum_probs=93.3
Q ss_pred CcEEEEEccCc---cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--Hh
Q 007212 403 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AG 477 (612)
Q Consensus 403 ~~~i~~iGrl~---~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~ 477 (612)
..++++.|++. +.|.++.+++++..+ +.++++++.+... ...+.++.+.+..+... ++ +.
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~---------~~~~~~v~~~~~~~~~~---~l~~~~ 86 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKP---------DTLGLNTRLYKWIPQND---LLGHPK 86 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCC---------TTCCTTEEEESSCCHHH---HHTSTT
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCc---------ccCCCcEEEecCCCHHH---HhcCCC
Confidence 46888999985 778888999998776 5788887765421 12455687777666543 45 99
Q ss_pred ccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecCcceEEecccccccccCCCC--CHHHHHHHHHHHH
Q 007212 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 478 aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~~~~~~~~~~~~v~~~--d~~~la~~i~~ll 551 (612)
||++|.. +-+.+++|||++|+|+|+.... +..+.+.+...|+.+ ++. +.++++++|.+++
T Consensus 87 ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 87 TRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV----------DFNTMSSTDLLNALKRVI 152 (170)
T ss_dssp EEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred cCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEe----------ccccCCHHHHHHHHHHHH
Confidence 9999964 3468999999999999999874 345667777789875 555 8899999999999
Q ss_pred Hh
Q 007212 552 AT 553 (612)
Q Consensus 552 ~~ 553 (612)
++
T Consensus 153 ~~ 154 (170)
T 2o6l_A 153 ND 154 (170)
T ss_dssp HC
T ss_pred cC
Confidence 87
No 52
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.72 E-value=9.4e-07 Score=94.26 Aligned_cols=155 Identities=12% Similarity=0.051 Sum_probs=100.2
Q ss_pred CcEEEEEccCc---cccCHHHHHHHHHhcccCCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007212 403 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~i~~iGrl~---~~Kg~d~li~A~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~a 478 (612)
..++++.|++. ..+.++.++++++.+ +++++++ |.++.. . ...++++......+. ..++..|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~---~~ll~~~ 303 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELV----L----PDDRDDCFAIDEVNF---QALFRRV 303 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCC----C----SCCCTTEEEESSCCH---HHHGGGS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCcccc----c----cCCCCCEEEeccCCh---HHHhccC
Confidence 36788899985 567788888888776 5677665 655421 1 234556776665553 3578999
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
|++|.- +-..+++||+++|+|+|+....+ ..+.+.+.+.|+.+. ....+.++++++|.++ ++
T Consensus 304 d~~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~--------~~~~~~~~l~~~i~~l-~~- 369 (416)
T 1rrv_A 304 AAVIHH----GSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD--------GPTPTFESLSAALTTV-LA- 369 (416)
T ss_dssp SEEEEC----CCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS--------SSCCCHHHHHHHHHHH-TS-
T ss_pred CEEEec----CChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCC--------CCCCCHHHHHHHHHHh-hC-
Confidence 999963 23469999999999999976533 444565666788641 1235789999999999 76
Q ss_pred CHHHHHHHHHHHHHhhcCcHHHHHHHHHHH-HHHHH
Q 007212 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETL-LNLEV 589 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y-~~l~~ 589 (612)
++.++++.+.+ +.+.-..-+ +..+.+ +.+..
T Consensus 370 -~~~~~~~~~~~--~~~~~~~~~-~~~~~i~e~~~~ 401 (416)
T 1rrv_A 370 -PETRARAEAVA--GMVLTDGAA-AAADLVLAAVGR 401 (416)
T ss_dssp -HHHHHHHHHHT--TTCCCCHHH-HHHHHHHHHHHC
T ss_pred -HHHHHHHHHHH--HHHhhcCcH-HHHHHHHHHHhc
Confidence 44444444332 233333333 555555 55543
No 53
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.15 E-value=1.1e-05 Score=86.02 Aligned_cols=155 Identities=17% Similarity=0.087 Sum_probs=105.5
Q ss_pred CcEEEEEccC-ccccCHHHHHHHHHhcccCCeEEEEE-ecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccE
Q 007212 403 IPVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~i~~iGrl-~~~Kg~d~li~A~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv 480 (612)
..++++.|++ ...+..+.++++++.+ +.+++++ |.+... . ...++++......+.. .++..||+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~~---~~l~~~d~ 304 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLV----L----PDDGADCFAIGEVNHQ---VLFGRVAA 304 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCC----C----SSCGGGEEECSSCCHH---HHGGGSSE
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCccc----c----cCCCCCEEEeCcCChH---HHHhhCCE
Confidence 3688889999 5888999999999887 4566665 655421 0 1234457666555543 46899999
Q ss_pred EEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCcceEEecccccccccCCC--CCHHHHHHHHHHHHHhh
Q 007212 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDP--VDVAAVSTTVRRALATY 554 (612)
Q Consensus 481 ~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~--~d~~~la~~i~~ll~~~ 554 (612)
+|..+ -..+++|||++|+|+|+....+ ..+.+.+.+.|+.+ +. .+.++++++|.++ ++
T Consensus 305 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~l-~~- 368 (415)
T 1iir_A 305 VIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAH----------DGPIPTFDSLSAALATA-LT- 368 (415)
T ss_dssp EEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------SSSSCCHHHHHHHHHHH-TS-
T ss_pred EEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccC----------CcCCCCHHHHHHHHHHH-cC-
Confidence 99643 2369999999999999987644 44556666678865 33 4889999999999 76
Q ss_pred CHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHc
Q 007212 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
++.++++.+. .+.+....-+++..+.+++++..
T Consensus 369 -~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 369 -PETHARATAV--AGTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp -HHHHHHHHHH--HHHSCSCHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHH--HHHHhhcChHHHHHHHHHHHHhc
Confidence 4444444333 33455666777777777777643
No 54
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.82 E-value=0.0022 Score=66.07 Aligned_cols=112 Identities=16% Similarity=0.155 Sum_probs=74.6
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcc-CccccCHH--HHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCC----Cce
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGR-LEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP----EKA 460 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGr-l~~~Kg~d--~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~----~~v 460 (612)
.+.+++.+|+..+ +..+++..|. ..+.|.+. .+.++++.|.+.+++++++|... ..+..+++....+ .++
T Consensus 167 ~~~~~~~~~~~~~-~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 167 KSYTCNQFSLSSE-RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWC 243 (348)
T ss_dssp HHHHHHHTTCCSS-SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTTE
T ss_pred HHHHHHHhCCCCC-CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChh--hHHHHHHHHHhhhhccccce
Confidence 4556777787533 2345666776 55667654 88888888876689999988654 2344455544332 124
Q ss_pred E-EEeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 461 R-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 461 ~-~~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
. ..+..+-.++..+++.||++|-.. .|..-+ |.++|+|+|+-
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~l 286 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVAL 286 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEE
Confidence 3 334456677778999999999875 345444 99999999875
No 55
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.60 E-value=0.0023 Score=72.95 Aligned_cols=182 Identities=13% Similarity=-0.020 Sum_probs=123.0
Q ss_pred HHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhccc--CCeEEEEEecCChhHHHHHHHHHHHCC---CceEEEecc
Q 007212 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 466 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~v~~~~~~ 466 (612)
|+.+|||.+. ++++++.+ ..|=-+..++++.++.+ |+.+|++..... ..++.+++...+.+ +++.+....
T Consensus 514 R~~~gLp~~~--v~f~~fN~--~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~-~~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 514 RSQYGLPEDA--IVYCNFNQ--LYKIDPSTLQMWANILKRVPNSVLWLLRFPA-VGEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp GGGGTCCTTS--EEEECCSC--GGGCCHHHHHHHHHHHHHCSSEEEEEEETTG-GGHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred hhhcCCCCCC--EEEEeCCc--cccCCHHHHHHHHHHHHhCCCCeEEEEeCcH-HHHHHHHHHHHhcCCCcCeEEECCCC
Confidence 6678998653 55555544 46666777777777765 899999887654 33455555555543 578888877
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---cceEEecccccccccCCCCCHHHH
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---FTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---~~G~~~~~~~~~~~~v~~~d~~~l 543 (612)
+.++.-..+..+|+++=|.-+ +-+.+.+||+.+|+|||+-....+..=+... ..|+- ++ -..|.++.
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl~--------e~-ia~~~~~Y 658 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGCL--------EL-IAKNRQEY 658 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTCG--------GG-BCSSHHHH
T ss_pred CHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCCc--------cc-ccCCHHHH
Confidence 776666789999999987665 4589999999999999987633222211100 01110 11 23678888
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHH---H--HhhcCcHHHHHHHHHHHHHHHHc
Q 007212 544 STTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 544 a~~i~~ll~~~~~~~~~~~~~~~---~--~~~fsw~~~a~~~~~~y~~l~~~ 590 (612)
.+...++..+ .+.+.++..+- + ..-|+-+..++.+++.|+++...
T Consensus 659 ~~~a~~la~d--~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 659 EDIAVKLGTD--LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 8888888888 44444443332 2 24588999999999999999865
No 56
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.41 E-value=0.0043 Score=64.33 Aligned_cols=111 Identities=13% Similarity=0.128 Sum_probs=73.9
Q ss_pred HHHHHhCCCCCCCCcEEEEEccCccccCH--HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceE-EEecc
Q 007212 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-GVAKF 466 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~--d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~-~~~~~ 466 (612)
.+.++.|++.++ ..+.+..|.-.+.|.+ +.+.+++..+.+.+.+++++|... .++..+++....+.++. ..+..
T Consensus 174 ~~l~~~g~~~~~-~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g~~ 250 (349)
T 3tov_A 174 EFYSSHGLTDTD-ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATGKF 250 (349)
T ss_dssp HHHHHTTCCTTC-CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTTCC
T ss_pred HHHHHcCCCCCC-CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeCCC
Confidence 344566775432 2445556654556654 678888888866688988888654 34455666555543333 33455
Q ss_pred ChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 467 ~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+-.++..+++.||++|-.- .|..-+ |.++|+|+|+-=
T Consensus 251 sl~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~lf 287 (349)
T 3tov_A 251 QLGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVALY 287 (349)
T ss_dssp CHHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEEC
T ss_pred CHHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEEE
Confidence 6677778999999999763 356666 899999999853
No 57
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=95.36 E-value=0.084 Score=52.79 Aligned_cols=94 Identities=12% Similarity=0.043 Sum_probs=61.4
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
.++++.|..+...-.+.+++++... .. -.++.|.+.+. .+.+++...+.+ ++.... |.. .+..+|+.||++|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~--~~-i~vv~G~~~~~-~~~l~~~~~~~~-~v~v~~-~~~-~m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT--KI-ISIATSSSNPN-LKKLQKFAKLHN-NIRLFI-DHE-NIAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT--SC-EEEEECTTCTT-HHHHHHHHHTCS-SEEEEE-SCS-CHHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC--CC-EEEEECCCchH-HHHHHHHHhhCC-CEEEEe-CHH-HHHHHHHHCCEEEE
Confidence 4667788776655444555555443 23 34566877653 455555555444 465443 333 35579999999997
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcCC
Q 007212 484 PSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+ .|.++.|++++|+|.|.-..
T Consensus 232 ~-----gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 232 S-----ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp E-----SSHHHHHHHHTTCCEEEECC
T ss_pred C-----CcHHHHHHHHcCCCEEEEeC
Confidence 3 46899999999999987653
No 58
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=95.00 E-value=0.16 Score=54.38 Aligned_cols=135 Identities=14% Similarity=0.014 Sum_probs=80.1
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
..+++..|.+... ..+.+.+.+..+.+.+.+++++-.+.. .+..-+....+.++++....+.+. . .+++++++.+
T Consensus 274 ~vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~-~~~lp~~~~~~~~~~~~vv~w~Pq-~--~vL~h~~v~~ 348 (454)
T 3hbf_A 274 SVVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP-KEKLPKGFLERTKTKGKIVAWAPQ-V--EILKHSSVGV 348 (454)
T ss_dssp CEEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH-HHHSCTTHHHHTTTTEEEESSCCH-H--HHHHSTTEEE
T ss_pred ceEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc-hhcCCHhHHhhcCCceEEEeeCCH-H--HHHhhcCcCe
Confidence 3566777877532 234444444444444677776543331 111111122233455666654444 2 5899999655
Q ss_pred EcCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 483 IPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 483 ~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+-++ +| .+++||+++|+|+|+-...+ ....+.+. +.|..+. -..-+.+++.++|++++++
T Consensus 349 fvtH---~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~--------~~~~~~~~l~~av~~ll~~ 414 (454)
T 3hbf_A 349 FLTH---SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD--------NGVLTKESIKKALELTMSS 414 (454)
T ss_dssp EEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG--------GGSCCHHHHHHHHHHHHSS
T ss_pred EEec---CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec--------CCCCCHHHHHHHHHHHHCC
Confidence 5555 55 57999999999999986532 23344453 6777641 0124789999999999976
No 59
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=94.56 E-value=0.15 Score=54.67 Aligned_cols=132 Identities=11% Similarity=-0.042 Sum_probs=76.1
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEE-ecCCh-hHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hc
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVL-GTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GA 478 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lviv-G~g~~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~a 478 (612)
..+++..|.+... ..+.+.+.+..+.+.+.+++++ |.... .+.+.+. ...++++......+.. .+++ ++
T Consensus 272 ~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~~---~~~~~~~~v~~w~pq~---~vL~h~~~ 344 (456)
T 2c1x_A 272 SVVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFL---EKTRGYGMVVPWAPQA---EVLAHEAV 344 (456)
T ss_dssp CEEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHH---HHHTTTEEEESCCCHH---HHHTSTTE
T ss_pred ceEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHHH---hhcCCceEEecCCCHH---HHhcCCcC
Confidence 3566777877543 3344444444443345666554 43221 1111111 1123456655444442 4788 66
Q ss_pred cEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 479 Dv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|++|. + +=.++++||+++|+|+|+-...+ ....+.+. +.|..+. -..-+.++++++|++++++
T Consensus 345 ~~fvt--h--~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~--------~~~~~~~~l~~~i~~ll~~ 412 (456)
T 2c1x_A 345 GAFVT--H--CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE--------GGVFTKSGLMSCFDQILSQ 412 (456)
T ss_dssp EEEEE--C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG--------GGSCCHHHHHHHHHHHHHS
T ss_pred CEEEe--c--CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec--------CCCcCHHHHHHHHHHHHCC
Confidence 77773 2 23468999999999999986532 23344455 6777541 0123689999999999987
No 60
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=93.45 E-value=0.77 Score=49.34 Aligned_cols=133 Identities=6% Similarity=-0.099 Sum_probs=77.1
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-----h-hHHHHHHHHHHHCCCceEEEeccChHHHHHHHH
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----K-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-----~-~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~ 476 (612)
..+++..|.+.. ...+.+.+.+..|.+.+.+++++-... . .+.+.+. ...++++......+. . .+++
T Consensus 296 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~---~~~~~~~~v~~~~pq-~--~~L~ 368 (482)
T 2pq6_A 296 SVVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFT---NEIADRGLIASWCPQ-D--KVLN 368 (482)
T ss_dssp CEEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHH---HHHTTTEEEESCCCH-H--HHHT
T ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHH---HhcCCCEEEEeecCH-H--HHhc
Confidence 356677777642 233444444444444577877663321 0 0112221 223455666554443 3 4887
Q ss_pred hccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----ccccee-cCcceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 477 ~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
++++-++-++ +=.++++||+++|+|+|+-...+ ....+. +-+.|..+. ..-+.+++.++|++++
T Consensus 369 h~~~~~~vth--~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~---------~~~~~~~l~~~i~~ll 437 (482)
T 2pq6_A 369 HPSIGGFLTH--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID---------TNVKREELAKLINEVI 437 (482)
T ss_dssp STTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC---------SSCCHHHHHHHHHHHH
T ss_pred CCCCCEEEec--CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC---------CCCCHHHHHHHHHHHH
Confidence 7666333343 22458999999999999987543 223332 445677541 2347899999999999
Q ss_pred Hh
Q 007212 552 AT 553 (612)
Q Consensus 552 ~~ 553 (612)
++
T Consensus 438 ~~ 439 (482)
T 2pq6_A 438 AG 439 (482)
T ss_dssp TS
T ss_pred cC
Confidence 87
No 61
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=93.26 E-value=0.58 Score=53.13 Aligned_cols=230 Identities=11% Similarity=0.073 Sum_probs=119.4
Q ss_pred HHhhCCEEEecCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCC--CcCCCcccccccccCcchhhhccHHHHHHH
Q 007212 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ--EWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 314 ~l~~ad~vi~vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l 391 (612)
.....|.+++.|+...+.+.+. ++.+.+ .++.-|..-. .+... .....++.+
T Consensus 475 ~~~~~D~~~~~s~~~~~~~~~~--f~~~~~--------~i~~~G~PR~D~l~~~~----------------~~~~~~~~~ 528 (729)
T 3l7i_A 475 ETSRWDYLISPNRYSTEIFRSA--FWMDEE--------RILEIGYPRNDVLVNRA----------------NDQEYLDEI 528 (729)
T ss_dssp HHTTCSEEEESSHHHHHHHHHH--TCCCGG--------GEEESCCGGGHHHHHST----------------TCHHHHHHH
T ss_pred hhccCCEEEeCCHHHHHHHHHH--hCCCcc--------eEEEcCCCchHHHhccc----------------chHHHHHHH
Confidence 3456899999999999888752 555432 2344454211 01010 112336678
Q ss_pred HHHhCCCCCCCCcEEEEEccCcccc----C-----HHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEE
Q 007212 392 QAEVGLPVDRNIPVIGFIGRLEEQK----G-----SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 392 ~~~~gl~~~~~~~~i~~iGrl~~~K----g-----~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~ 462 (612)
+++++++. ++++|+|.-.+.... | +..-++.+.+....+..+++-. .+.+.+.+. + ..+.+.+..
T Consensus 529 ~~~~~~~~--~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~--Hp~~~~~~~-~-~~~~~~~~~ 602 (729)
T 3l7i_A 529 RTHLNLPS--DKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRM--HYLISNALD-L-SGYENFAID 602 (729)
T ss_dssp HHHTTCCS--SCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECC--CHHHHTTCC-C-TTCTTTEEE
T ss_pred HHHhCCCC--CCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEec--Ccchhcccc-c-cccCCcEEe
Confidence 89999875 458999998776531 1 1112333333223466666533 222111110 0 112333433
Q ss_pred EeccChHHHHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHH
Q 007212 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 463 ~~~~~~~~~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~ 542 (612)
...+ +.+.+++..||++|- -++-+++|++..++|||.-... ..+.. +...|+.+. +..+.--.-..|.++
T Consensus 603 ~~~~--~di~~ll~~aD~lIT-----DySSv~fD~~~l~kPiif~~~D-~~~Y~-~~~rg~y~d-~~~~~pg~~~~~~~e 672 (729)
T 3l7i_A 603 VSNY--NDVSELFLISDCLIT-----DYSSVMFDYGILKRPQFFFAYD-IDKYD-KGLRGFYMN-YMEDLPGPIYTEPYG 672 (729)
T ss_dssp CTTC--SCHHHHHHTCSEEEE-----SSCTHHHHHGGGCCCEEEECTT-TTTTT-SSCCSBSSC-TTSSSSSCEESSHHH
T ss_pred CCCC--cCHHHHHHHhCEEEe-----echHHHHhHHhhCCCEEEecCC-HHHHh-hccCCcccC-hhHhCCCCeECCHHH
Confidence 3332 245578999999992 2678899999999999976321 11211 112344321 100000001268899
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHhhcCcH--HHHHHHHHHHHHH
Q 007212 543 VSTTVRRALATYGTQALAEMMKNGMAQDLSWK--GPAKKWEETLLNL 587 (612)
Q Consensus 543 la~~i~~ll~~~~~~~~~~~~~~~~~~~fsw~--~~a~~~~~~y~~l 587 (612)
|.++|+..... .....+..++...+-+.++ +.+++..+.+.+.
T Consensus 673 L~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~ 717 (729)
T 3l7i_A 673 LAKELKNLDKV--QQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKD 717 (729)
T ss_dssp HHHHHTTHHHH--HHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHH
T ss_pred HHHHHhhhhcc--chhHHHHHHHHHHHhCCccCChHHHHHHHHHHhc
Confidence 99999888764 2233333333333333333 4555555544433
No 62
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=92.47 E-value=1.7 Score=46.73 Aligned_cols=140 Identities=10% Similarity=-0.023 Sum_probs=77.0
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEe-cCC-------------hhHHHHH-HHHHHHCCCceEEEeccC
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLG-TGK-------------KPMEKQL-EQLEILYPEKARGVAKFN 467 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG-~g~-------------~~~~~~l-~~l~~~~~~~v~~~~~~~ 467 (612)
..+++..|.+.. ...+.+.+.+..+.+.+.+++++- .+. ..+...+ ....++..++-..+..+-
T Consensus 269 ~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~ 347 (480)
T 2vch_A 269 SVLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWA 347 (480)
T ss_dssp CEEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCC
T ss_pred ceEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCcc
Confidence 367777888753 344555555555544577777653 321 0010000 001111111113333243
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccce-ecCcceEEecccccccccCCCCCHH
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~~~~~~~~~~~~v~~~d~~ 541 (612)
.+. .+++++++.++-++ +| .+++||+++|+|+|+-...+ ....+ ++-+.|..+.... + ..-+.+
T Consensus 348 Pq~--~vL~h~~v~~fvtH---gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~-~----~~~~~~ 417 (480)
T 2vch_A 348 PQA--QVLAHPSTGGFLTH---CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGD-D----GLVRRE 417 (480)
T ss_dssp CHH--HHHHSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCT-T----SCCCHH
T ss_pred CHH--HHhCCCCcCeEEec---ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeeccc-C----CccCHH
Confidence 333 58999996444444 44 57999999999999987532 23333 4555677431000 0 024789
Q ss_pred HHHHHHHHHHHh
Q 007212 542 AVSTTVRRALAT 553 (612)
Q Consensus 542 ~la~~i~~ll~~ 553 (612)
+++++|++++++
T Consensus 418 ~l~~av~~vl~~ 429 (480)
T 2vch_A 418 EVARVVKGLMEG 429 (480)
T ss_dssp HHHHHHHHHHTS
T ss_pred HHHHHHHHHhcC
Confidence 999999999973
No 63
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=91.07 E-value=2.2 Score=45.47 Aligned_cols=137 Identities=11% Similarity=0.064 Sum_probs=75.9
Q ss_pred CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcc
Q 007212 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GAD 479 (612)
Q Consensus 403 ~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aD 479 (612)
..+++..|.+...-+.+.+.+++..|.+.+.+++++-... ..+.+.+.+.... ++++.... |-.+. .+++ ++|
T Consensus 277 ~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~-~~~~~v~~-w~pq~--~vL~h~~~~ 352 (463)
T 2acv_A 277 SVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL-EGKGMICG-WAPQV--EVLAHKAIG 352 (463)
T ss_dssp CEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH-HCSEEEES-SCCHH--HHHHSTTEE
T ss_pred ceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc-CCCEEEEc-cCCHH--HHhCCCccC
Confidence 3567777887632343444444444444467777654322 1111111111100 23455444 43333 3676 577
Q ss_pred EEEEcCCCCCCcHHHHHHHHcCCceEEcCCCC----cccc-eecCcceEEec-ccccccccCC--CCCHHHHHHHHHHHH
Q 007212 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMG-SFSVDCEAVD--PVDVAAVSTTVRRAL 551 (612)
Q Consensus 480 v~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-v~~g~~G~~~~-~~~~~~~~v~--~~d~~~la~~i~~ll 551 (612)
++|.-. =.++++||+++|+|+|+-...+ .... +++-+.|..+. .+. -. .-+.+++.++|++++
T Consensus 353 ~fvth~----G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~-----~~~~~~~~~~l~~ai~~ll 423 (463)
T 2acv_A 353 GFVSHC----GWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR-----KGSDVVAAEEIEKGLKDLM 423 (463)
T ss_dssp EEEECC----CHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC-----TTCCCCCHHHHHHHHHHHT
T ss_pred eEEecC----CchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC-----CCCccccHHHHHHHHHHHH
Confidence 777322 2468999999999999987532 2334 45556777531 000 01 347899999999999
Q ss_pred H
Q 007212 552 A 552 (612)
Q Consensus 552 ~ 552 (612)
+
T Consensus 424 ~ 424 (463)
T 2acv_A 424 D 424 (463)
T ss_dssp C
T ss_pred h
Confidence 6
No 64
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=89.32 E-value=1.8 Score=43.42 Aligned_cols=97 Identities=14% Similarity=0.152 Sum_probs=66.0
Q ss_pred cEEEEEccCccccCH--HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEE
Q 007212 404 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~--d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~ 481 (612)
.+++..|.=.+.|.+ +.+.+.+..|.+.++++++.+.++ ...+..+++....+. +...+..+-.++..+++.||++
T Consensus 180 ~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~-~e~~~~~~i~~~~~~-~~l~g~~sl~el~ali~~a~l~ 257 (326)
T 2gt1_A 180 YAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP-HEEERAKRLAEGFAY-VEVLPKMSLEGVARVLAGAKFV 257 (326)
T ss_dssp EEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH-HHHHHHHHHHTTCTT-EEECCCCCHHHHHHHHHTCSEE
T ss_pred EEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH-HHHHHHHHHHhhCCc-ccccCCCCHHHHHHHHHhCCEE
Confidence 455666655556654 588888888876788988873333 233445555554443 5555566677778899999999
Q ss_pred EEcCCCCCCcHHHHHHHHcCCceEEc
Q 007212 482 LIPSRFEPCGLIQLHAMRYGTVPIVA 507 (612)
Q Consensus 482 v~pS~~E~~gl~~lEAma~G~PvI~s 507 (612)
|-.-. |..=+ |.+.|+|+|+-
T Consensus 258 I~~DS----G~~Hl-Aaa~g~P~v~l 278 (326)
T 2gt1_A 258 VSVDT----GLSHL-TAALDRPNITV 278 (326)
T ss_dssp EEESS----HHHHH-HHHTTCCEEEE
T ss_pred EecCC----cHHHH-HHHcCCCEEEE
Confidence 96643 56656 77799999875
No 65
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=85.26 E-value=0.82 Score=43.87 Aligned_cols=37 Identities=19% Similarity=0.157 Sum_probs=28.9
Q ss_pred HHHHHHH-hccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC
Q 007212 470 LAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 510 (612)
Q Consensus 470 ~~~~i~~-~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g 510 (612)
.+..+++ .||++|.- +=..+++|++++|+|.|+-...
T Consensus 124 ~m~~~l~~~AdlvIsh----aGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 124 KMQSIIRDYSDLVISH----AGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp SHHHHHHHHCSCEEES----SCHHHHHHHHHTTCCCCEECCS
T ss_pred hHHHHHHhcCCEEEEC----CcHHHHHHHHHhCCCEEEEcCc
Confidence 3446899 99999943 3357899999999999876543
No 66
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=79.75 E-value=1.3 Score=46.18 Aligned_cols=37 Identities=22% Similarity=0.259 Sum_probs=31.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++ .| ++|--.-+..|+++|+++||+|+++++.
T Consensus 1 M~Il~~~---~~---~~GHv~P~l~la~~L~~~Gh~V~~~~~~ 37 (415)
T 1iir_A 1 MRVLLAT---CG---SRGDTEPLVALAVRVRDLGADVRMCAPP 37 (415)
T ss_dssp CEEEEEC---CS---CHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CeEEEEc---CC---CchhHHHHHHHHHHHHHCCCeEEEEcCH
Confidence 8999985 24 5777778888999999999999999976
No 67
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=75.54 E-value=1.7 Score=42.96 Aligned_cols=33 Identities=30% Similarity=0.493 Sum_probs=25.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++. ||.|..=..|++.|.++||+|++++.+
T Consensus 1 MkILVT----------GatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG----------GGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE----------CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 887754 444545567999999999999998753
No 68
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=75.24 E-value=3 Score=41.34 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=28.1
Q ss_pred ccCCCceEEEEEecccCccccccH-HHHhhchHHHHHhCCCeEEEEE
Q 007212 80 VCGVGLNILFVGTEVAPWSKTGGL-GDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~-~~~~~~L~~~L~~~Gh~V~vit 125 (612)
..|+.||||+|... |. ..+. ........++|.+.||+|.++-
T Consensus 18 ~~m~~MKiLII~aH--P~--~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 18 LYFQSMKVLLIYAH--PE--PRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp ----CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred chhhCCeEEEEEeC--CC--CccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 44778999999875 64 3333 3344556788889999999884
No 69
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=73.90 E-value=2.3 Score=40.38 Aligned_cols=40 Identities=23% Similarity=0.353 Sum_probs=27.7
Q ss_pred ccccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 78 MIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 78 ~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
....+++|+|++++. +||+| ..+++.|.++||+|.+++..
T Consensus 15 ~~~~l~~~~ilVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 15 ENLYFQGMRVLVVGA-------NGKVA---RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp ------CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred cccCcCCCeEEEECC-------CChHH---HHHHHHHHhCCCeEEEEECC
Confidence 334456899887764 57777 56888899999999998755
No 70
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=72.31 E-value=5.1 Score=35.20 Aligned_cols=41 Identities=20% Similarity=0.202 Sum_probs=32.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeE-EEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V-~vit~~ 127 (612)
.|||+|+... +|+ ..-.......++.++.+.||+| .|+--.
T Consensus 12 ~~~~~ivv~~-~Py--g~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 12 SMRFAIVVTG-PAY--GTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCEEEEEECS-CSS--SSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred ceEEEEEEcC-CCC--CcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 5999999887 676 4455556688999999999999 887755
No 71
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=72.06 E-value=3.2 Score=38.05 Aligned_cols=35 Identities=20% Similarity=0.180 Sum_probs=26.8
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 2 ~~~~ilVtGa-------tG~iG---~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 2 AVKKIAIFGA-------TGQTG---LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEEcC-------CcHHH---HHHHHHHHHCCCeEEEEEeC
Confidence 4588887664 46666 56888899999999988754
No 72
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=72.02 E-value=5 Score=34.57 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=31.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeE-EEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V-~vit~~ 127 (612)
||++|+... +|+ ..-.......++.++.+.||+| .|+-..
T Consensus 1 mk~~iiv~~-~p~--~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINE-GPY--QHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECS-CTT--TSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 899999876 675 3345556788999999999999 888765
No 73
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=69.79 E-value=3.8 Score=43.83 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=32.8
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
+++++|+++. +| ..|--.-+..|++.|+++||+|+++++..
T Consensus 6 ~~~~~vl~~p---~p---~~GHi~P~l~La~~L~~rG~~VT~v~t~~ 46 (482)
T 2pq6_A 6 NRKPHVVMIP---YP---VQGHINPLFKLAKLLHLRGFHITFVNTEY 46 (482)
T ss_dssp --CCEEEEEC---CS---SHHHHHHHHHHHHHHHHTTCEEEEEEEHH
T ss_pred CCCCEEEEec---Cc---cchhHHHHHHHHHHHHhCCCeEEEEeCCc
Confidence 3457999987 35 46777788999999999999999999763
No 74
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=67.48 E-value=3.6 Score=40.16 Aligned_cols=40 Identities=23% Similarity=0.244 Sum_probs=29.7
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
++||||+.+..- .. +.-+..|.++|.+ +|+|+|++|..++
T Consensus 10 ~~m~ILlTNDDG-i~------apGi~aL~~~l~~-~~~V~VVAP~~~~ 49 (261)
T 3ty2_A 10 PKLRLLLSNDDG-VY------AKGLAILAKTLAD-LGEVDVVAPDRNR 49 (261)
T ss_dssp -CCEEEEECSSC-TT------CHHHHHHHHHHTT-TSEEEEEEESSCC
T ss_pred CCCeEEEEcCCC-CC------CHHHHHHHHHHHh-cCCEEEEecCCCC
Confidence 469999998862 21 2346688888887 7999999998554
No 75
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=66.31 E-value=4.1 Score=37.81 Aligned_cols=33 Identities=27% Similarity=0.463 Sum_probs=25.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..+++.|.++||+|.+++.+
T Consensus 1 MkvlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGA-------TGRAG---SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcC-------CchhH---HHHHHHHHhCCCEEEEEEcC
Confidence 78877664 47777 56788899999999988765
No 76
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=65.62 E-value=3.8 Score=41.09 Aligned_cols=43 Identities=28% Similarity=0.437 Sum_probs=30.2
Q ss_pred CccccccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 75 PSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 75 ~~~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..++....++|+|++.+. +|++| ..|++.|+++||+|.++...
T Consensus 11 ~~~~~~~~~~~~vlVTGa-------sG~iG---~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 11 SSGLVPRGSHMRILITGG-------AGCLG---SNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp ---CCSTTTCCEEEEETT-------TSHHH---HHHHHHHGGGTCEEEEEECC
T ss_pred ccCCcccCCCCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 344555566899887764 47777 56788899999999888754
No 77
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=65.31 E-value=4.4 Score=37.78 Aligned_cols=33 Identities=24% Similarity=0.515 Sum_probs=25.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..++++|.++||+|.+++..
T Consensus 1 MkilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGA-------TGRAG---SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC-------CCHHH---HHHHHHHHHCCCEEEEEEec
Confidence 78776654 47776 57888899999999998754
No 78
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=65.14 E-value=58 Score=26.93 Aligned_cols=109 Identities=13% Similarity=0.142 Sum_probs=66.8
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 503 (612)
..+++|+.+.. .....+.++..+.+-.+. ..-+.+.+-..+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 6 ~~~iLivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ 82 (140)
T 3grc_A 6 RPRILICEDDP-DIARLLNLMLEKGGFDSD--MVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLA 82 (140)
T ss_dssp CSEEEEECSCH-HHHHHHHHHHHHTTCEEE--EECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCE
T ss_pred CCCEEEEcCCH-HHHHHHHHHHHHCCCeEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCC
Confidence 45667766543 344555555555442232 2224444433333 45888876654 4567888887765 677
Q ss_pred eEEcCCCC----cc-cceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 504 PIVASTGG----LV-DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg----~~-e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+|+-.... .. +.+..|..+++. .|.+.++|.++|.++++.
T Consensus 83 ii~~s~~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 83 IVVVSANAREGELEFNSQPLAVSTWLE----------KPIDENLLILSLHRAIDN 127 (140)
T ss_dssp EEEECTTHHHHHHHHCCTTTCCCEEEC----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEecCCChHHHHHHhhhcCCCEEEe----------CCCCHHHHHHHHHHHHHh
Confidence 76544322 12 445567788865 899999999999999886
No 79
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=62.44 E-value=51 Score=27.57 Aligned_cols=109 Identities=14% Similarity=0.110 Sum_probs=64.9
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 503 (612)
..+++|+.+... ....+...-...+ +.....-+...+...+. ..|++|+-... +.-|+.+++.+.. .+|
T Consensus 8 ~~~iLivd~~~~-~~~~l~~~L~~~g--~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~p 84 (147)
T 2zay_A 8 WWRIMLVDTQLP-ALAASISALSQEG--FDIIQCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIP 84 (147)
T ss_dssp CEEEEEECTTGG-GGHHHHHHHHHHT--EEEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSC
T ss_pred CceEEEEeCCHH-HHHHHHHHHHHcC--CeEEEeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCC
Confidence 567777776542 3333333333333 22222224444333333 47888876654 4467788888764 567
Q ss_pred eEEc-CCCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 504 PIVA-STGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s-~~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+|+- +... ..+.+..|..+++. .|.+.++|...|..++..
T Consensus 85 ii~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~L~~~i~~~~~~ 128 (147)
T 2zay_A 85 VIALSGRATAKEEAQLLDMGFIDFIA----------KPVNAIRLSARIKRVLKL 128 (147)
T ss_dssp EEEEESSCCHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHhCCCCEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 7644 3322 12334567888876 899999999999998876
No 80
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=59.66 E-value=6.8 Score=38.13 Aligned_cols=35 Identities=34% Similarity=0.414 Sum_probs=25.9
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|++|||++++ .|++| ..|++.|.++||+|.+++..
T Consensus 1 M~~~~ilVtG--------aG~iG---~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG--------CGDLG---LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC--------CSHHH---HHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEEC--------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4568888775 24555 46788899999999999765
No 81
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=59.43 E-value=5.4 Score=37.17 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=26.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..+++.|.++||+|.+++..
T Consensus 1 M~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGS-------TGRVG---KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 78877664 47777 57888899999999998755
No 82
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=59.25 E-value=4.7 Score=38.22 Aligned_cols=25 Identities=16% Similarity=0.142 Sum_probs=20.1
Q ss_pred cccHHHHhhchHHHHHhCC-CeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~G-h~V~vit~~ 127 (612)
+||+| ..+++.|+++| |+|.++...
T Consensus 32 tG~iG---~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 32 GGQIA---RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp TSHHH---HHHHHHHTTCTTEEEEEEESS
T ss_pred CcHHH---HHHHHHHHhCCCceEEEEEcC
Confidence 57777 56888899999 899888755
No 83
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=59.15 E-value=6.3 Score=42.10 Aligned_cols=40 Identities=15% Similarity=0.044 Sum_probs=31.4
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhC-CCeEEEEEecC
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRY 128 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~~ 128 (612)
++|+|+++.. | ..|--.-+..|++.|+++ ||+|+++++..
T Consensus 5 ~~~~vl~~p~---p---~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 5 KTPHVAIIPS---P---GMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp -CCEEEEECC---S---CHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred CCcEEEEecC---c---chhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 4588888862 4 456666788999999998 99999999763
No 84
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=58.35 E-value=12 Score=35.67 Aligned_cols=40 Identities=10% Similarity=0.094 Sum_probs=33.1
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.+||.+||+..- ..-|-..++..|+++|+++|++|..+=|
T Consensus 2 ~~mk~i~Itgt~----t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 2 NAMKKFFIIGTD----TEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TTCEEEEEEESS----SSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEEeCC----CCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 469999998762 2468888999999999999999988743
No 85
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=57.77 E-value=9.1 Score=32.44 Aligned_cols=34 Identities=29% Similarity=0.550 Sum_probs=24.3
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+.|||++++. |.+| ..+++.|.+.||+|+++...
T Consensus 3 ~~m~i~IiG~--------G~iG---~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI--------GRVG---YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 3589998862 3344 45788899999999988754
No 86
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=57.32 E-value=15 Score=31.61 Aligned_cols=43 Identities=14% Similarity=-0.133 Sum_probs=32.7
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
+.+|++||... +|+ ...-......++...++.||+|.|+...+
T Consensus 14 ~~~kl~ii~~s-gP~--~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 14 QXXXILIVVTH-GPE--DLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp CCCEEEEEECC-CGG--GTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccceEEEEEcc-CCC--CHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 35799999876 565 34455566778888899999999988663
No 87
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=56.55 E-value=39 Score=31.25 Aligned_cols=128 Identities=15% Similarity=0.144 Sum_probs=68.7
Q ss_pred cCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc----------------ChH-HHHHHHHhc
Q 007212 416 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF----------------NIP-LAHMIIAGA 478 (612)
Q Consensus 416 Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~----------------~~~-~~~~i~~~a 478 (612)
.+.+..-+..+.|.+.++.++- | |...++....+-+.+.+..+..+... +-. .-..+...|
T Consensus 42 ~~~~~A~~lg~~LA~~G~~vVs-G-g~~GiM~aa~~gAl~~GG~~iGVlP~e~~~~~~~~~~~~~~~~f~~Rk~~m~~~s 119 (195)
T 1rcu_A 42 ELRDICLELGRTLAKKGYLVFN-G-GRDGVMELVSQGVREAGGTVVGILPDEEAGNPYLSVAVKTGLDFQMRSFVLLRNA 119 (195)
T ss_dssp GGHHHHHHHHHHHHHTTCEEEE-C-CSSHHHHHHHHHHHHTTCCEEEEESTTCCCCTTCSEEEECCCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHCCCEEEe-C-CHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCcceeeecCCCHHHHHHHHHHhC
Confidence 5556666666666567777655 6 44456666666555544333333211 111 112467788
Q ss_pred cEEEEcCCCCCCcH--HHHHHHHcCCceEEcCC-CCcccceecC-cce-EEecccccccccCCCCCHHHHHHHHHH
Q 007212 479 DFILIPSRFEPCGL--IQLHAMRYGTVPIVAST-GGLVDTVEEG-FTG-FQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 479 Dv~v~pS~~E~~gl--~~lEAma~G~PvI~s~~-gg~~e~v~~g-~~G-~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
|.+|+..- ++|. .+.||+..++||++-+. |...+++++- ..| |+=... .++ +.-.+|++++.+.|.+
T Consensus 120 da~IvlpG--G~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~~~~-~~~-i~~~~~~ee~~~~l~~ 191 (195)
T 1rcu_A 120 DVVVSIGG--EIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLDNRR-IVE-IHQAWTVEEAVQIIEQ 191 (195)
T ss_dssp SEEEEESC--CHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSSTTC-CSC-EEEESSHHHHHHHHHT
T ss_pred CEEEEecC--CCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCCHHH-cCe-EEEeCCHHHHHHHHHH
Confidence 88776432 3555 38899999999999864 4333333210 122 221000 000 1134678888887754
No 88
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=56.49 E-value=12 Score=34.24 Aligned_cols=39 Identities=10% Similarity=0.110 Sum_probs=31.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|... | +|-...+...+++.+.+.|++|.++...
T Consensus 5 M~kilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 5 SPYILVLYYS--R---HGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp CCEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred cceEEEEEeC--C---CChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 4699999864 4 5778888888999999999999888654
No 89
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=56.29 E-value=6.7 Score=39.14 Aligned_cols=36 Identities=28% Similarity=0.286 Sum_probs=25.6
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|++|+|++.+. +|++| ..|++.|.++||+|.++...
T Consensus 1 m~~~~vlVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITGI-------RGQDG---AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEECC-------CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 34678776653 46666 56788899999999887643
No 90
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=55.98 E-value=7.4 Score=35.61 Aligned_cols=34 Identities=26% Similarity=0.510 Sum_probs=24.8
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+|||++.+. .||+| ..+++.|+ +||+|.++...
T Consensus 2 ~kM~vlVtGa-------sg~iG---~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLIGA-------SGTLG---SAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEETT-------TSHHH---HHHHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEEcC-------CcHHH---HHHHHHHH-CCCeEEEEecC
Confidence 3588766653 47777 56788899 99999887644
No 91
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=55.19 E-value=89 Score=25.83 Aligned_cols=108 Identities=14% Similarity=0.232 Sum_probs=67.3
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH----hccEEEEcCCC-CCCcHHHHHHHHc---CCce
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA----GADFILIPSRF-EPCGLIQLHAMRY---GTVP 504 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~----~aDv~v~pS~~-E~~gl~~lEAma~---G~Pv 504 (612)
.+++|+.+.. ...+.+..+....+..+. ..-+.+.+...+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 4 ~~ilivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 80 (143)
T 3jte_A 4 AKILVIDDES-TILQNIKFLLEIDGNEVL--TASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAV 80 (143)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEE
T ss_pred CEEEEEcCCH-HHHHHHHHHHHhCCceEE--EeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeE
Confidence 4667776543 455556665555553332 2234444444444 57888886654 4457777766643 5677
Q ss_pred EEcC-CCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 505 IVAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|+-. ... ..+.+..|..+++. .|.+.+++..+|..+++.
T Consensus 81 i~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 81 IILTGHGDLDNAILAMKEGAFEYLR----------KPVTAQDLSIAINNAINR 123 (143)
T ss_dssp EEEECTTCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHhCcceeEe----------CCCCHHHHHHHHHHHHHH
Confidence 6443 222 23455667888876 899999999999999875
No 92
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=54.90 E-value=10 Score=36.46 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=29.3
Q ss_pred CCceEEEEEecccCccccccH--HHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGL--GDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~--~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|||+.|+.. .||. .+.+.+|+.+|+++|++|.++=..
T Consensus 4 ~~~~vI~v~s~------kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 4 AKVRRIALANQ------KGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp -CCCEEEECCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEEEeC------CCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 46887777643 4555 467788999999999999998654
No 93
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=54.66 E-value=17 Score=35.20 Aligned_cols=43 Identities=23% Similarity=0.191 Sum_probs=35.0
Q ss_pred ccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.|.+.||.+||+.. ...-|-..++..|+++|+++|++|..+=|
T Consensus 21 ~~~~~m~~i~Itgt----~t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 21 YFQSHMTILVVTGT----GTGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp -CCSSCEEEEEEES----STTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred hcccCCCEEEEEeC----CCCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 34567999999876 23468888999999999999999998865
No 94
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=54.57 E-value=13 Score=30.72 Aligned_cols=40 Identities=18% Similarity=0.061 Sum_probs=30.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC-CC-eEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GH-RVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh-~V~vit~~ 127 (612)
||++|+... +|+ ..........++.++.+. || +|.|+-..
T Consensus 2 ~k~~ii~~~-~p~--~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 2 QKIVIVANG-APY--GSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CEEEEEECC-CTT--TCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cEEEEEEcC-CCC--CcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 488888876 565 334455577889999999 99 99988866
No 95
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=54.56 E-value=8.4 Score=38.50 Aligned_cols=41 Identities=20% Similarity=0.293 Sum_probs=25.5
Q ss_pred cccccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 77 LMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 77 ~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+.....++|+|++.+. +|++| ..|++.|.++||+|.++...
T Consensus 14 ~~~~~~~~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 14 LVPRGSHMKKVFITGI-------CGQIG---SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp -------CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred eeeecCCCCEEEEeCC-------ccHHH---HHHHHHHHHCCCEEEEEECC
Confidence 3333445577776653 46666 56788899999999988754
No 96
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=53.80 E-value=8.3 Score=38.80 Aligned_cols=36 Identities=19% Similarity=0.164 Sum_probs=26.1
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|.+|+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 8 M~~~~IlVtGa-------tG~iG---~~l~~~L~~~g~~V~~l~R~ 43 (346)
T 3i6i_A 8 SPKGRVLIAGA-------TGFIG---QFVATASLDAHRPTYILARP 43 (346)
T ss_dssp ---CCEEEECT-------TSHHH---HHHHHHHHHTTCCEEEEECS
T ss_pred CCCCeEEEECC-------CcHHH---HHHHHHHHHCCCCEEEEECC
Confidence 45688888775 46666 46778899999999988765
No 97
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=53.74 E-value=13 Score=32.40 Aligned_cols=41 Identities=12% Similarity=0.014 Sum_probs=30.6
Q ss_pred Cc-eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GL-NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~M-kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.| |++|+... +|+ ..-...-..+++.++++.||+|.|+--.
T Consensus 4 ~Mkk~~ivv~~-~P~--g~~~~~~al~~a~a~~a~~~~v~Vff~~ 45 (136)
T 2hy5_B 4 VVKKFMYLNRK-APY--GTIYAWEALEVVLIGAAFDQDVCVLFLD 45 (136)
T ss_dssp -CCEEEEEECS-CTT--TSSHHHHHHHHHHHHGGGCCEEEEEECG
T ss_pred chhEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhCCCCEEEEEEh
Confidence 47 49999865 676 3335555678899999999999998865
No 98
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=53.46 E-value=94 Score=25.59 Aligned_cols=110 Identities=6% Similarity=0.026 Sum_probs=65.9
Q ss_pred CCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc-----CC
Q 007212 431 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GT 502 (612)
Q Consensus 431 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~ 502 (612)
...+++|+.+.. ...+.+.++-...+-.+ ...-+.+.+...+. ..|++++-... +.-|+.+++.+.. .+
T Consensus 6 ~~~~iLivdd~~-~~~~~l~~~L~~~g~~v--~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~ 82 (142)
T 3cg4_A 6 HKGDVMIVDDDA-HVRIAVKTILSDAGFHI--ISADSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGI 82 (142)
T ss_dssp CCCEEEEECSCH-HHHHHHHHHHHHTTCEE--EEESSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTE
T ss_pred CCCeEEEEcCCH-HHHHHHHHHHHHCCeEE--EEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCC
Confidence 356777777544 34445555544444223 22224444444444 35888876554 3467778887764 45
Q ss_pred ceEEc-CCC---CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 503 VPIVA-STG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 503 PvI~s-~~g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|+|+- +.. ...+.++.|..+++. .|.+.++|.+.|..++..
T Consensus 83 pii~~s~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~i~~~~~~ 127 (142)
T 3cg4_A 83 AIVMLTAKNAPDAKMIGLQEYVVDYIT----------KPFDNEDLIEKTTFFMGF 127 (142)
T ss_dssp EEEEEECTTCCCCSSTTGGGGEEEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHhcCccEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 66543 322 233445567778876 889999999999988864
No 99
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=53.44 E-value=13 Score=33.00 Aligned_cols=38 Identities=16% Similarity=0.136 Sum_probs=31.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+++... + +|....+...+++.|.+.|++|.++...
T Consensus 1 Mkv~IvY~S--~---tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYLS--D---YGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEECT--T---STTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEEC--C---ChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 888888642 4 7999999999999999999999888654
No 100
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=53.13 E-value=10 Score=37.82 Aligned_cols=34 Identities=29% Similarity=0.409 Sum_probs=26.1
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++++. +|++| ..|++.|.++||+|.+++..
T Consensus 13 ~M~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLGA-------TGLLG---HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 488877664 46666 56788899999999988754
No 101
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=52.25 E-value=9.6 Score=38.16 Aligned_cols=38 Identities=26% Similarity=0.335 Sum_probs=25.5
Q ss_pred ccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..+++|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 23 ~~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 23 MEKDRKRILITGG-------AGFVG---SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp ----CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEEcC-------ccHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3355677776653 46666 56788899999999988753
No 102
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=51.91 E-value=16 Score=35.77 Aligned_cols=44 Identities=18% Similarity=0.068 Sum_probs=31.9
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCccc
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+..++..+|++|--+.-+..--.+..|+..|+|+|+..+|...+
T Consensus 67 l~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG~s~~ 110 (272)
T 4f3y_A 67 IERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEP 110 (272)
T ss_dssp HHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHH
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHH
Confidence 34567899999977754444444667899999999988875443
No 103
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=51.64 E-value=1e+02 Score=25.51 Aligned_cols=111 Identities=10% Similarity=0.024 Sum_probs=69.3
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 503 (612)
..+++|+.+.. .....+..+....+........-+...+...+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 5 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (144)
T 3kht_A 5 SKRVLVVEDNP-DDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTP 83 (144)
T ss_dssp CEEEEEECCCH-HHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCC
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Confidence 45677777543 455556665555553322223334555444444 35888876654 4467788888765 577
Q ss_pred eEEcCCCC----cccceecCcceEEecccccccccCCCC-CHHHHHHHHHHHHHh
Q 007212 504 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV-DVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~-d~~~la~~i~~ll~~ 553 (612)
+|+-.... ..+.++.|..+++. .|. +.++|.++|..+++.
T Consensus 84 ii~~s~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~~l~~~i~~~l~~ 128 (144)
T 3kht_A 84 IVILTDNVSDDRAKQCMAAGASSVVD----------KSSNNVTDFYGRIYAIFSY 128 (144)
T ss_dssp EEEEETTCCHHHHHHHHHTTCSEEEE----------CCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHcCCCEEEE----------CCCCcHHHHHHHHHHHHHH
Confidence 76543322 22345567888876 888 999999999998875
No 104
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=51.35 E-value=7.1 Score=39.13 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=22.7
Q ss_pred ccccccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 76 SLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 76 ~~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
.+....+++|||++++. +|++| ..|+++|.++|+++.|+.
T Consensus 16 ~n~~~~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~~~v~~ 55 (346)
T 4egb_A 16 ENLYFQSNAMNILVTGG-------AGFIG---SNFVHYMLQSYETYKIIN 55 (346)
T ss_dssp --------CEEEEEETT-------TSHHH---HHHHHHHHHHCTTEEEEE
T ss_pred cccccccCCCeEEEECC-------ccHHH---HHHHHHHHhhCCCcEEEE
Confidence 34444466788776654 46666 578888999996655554
No 105
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=51.26 E-value=11 Score=37.71 Aligned_cols=35 Identities=26% Similarity=0.269 Sum_probs=25.8
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|+|++.+. +||+| ..+++.|+++||+|.++...
T Consensus 4 ~~~~vlVTGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 4 TKGTILVTGG-------AGYIG---SHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp SSCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CCcEEEEecC-------CcHHH---HHHHHHHHHCCCcEEEEecC
Confidence 3577766553 57777 56888999999999887644
No 106
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=51.04 E-value=11 Score=37.27 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=25.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|||++++. +|++| ..|++.|.++||+|.+++..
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGG-------TGFLG---QYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 478776654 35555 56788899999999888754
No 107
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=50.86 E-value=8.5 Score=38.65 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=27.2
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 23 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 23 FSPKTWLITGV-------AGFIG---SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp HSCCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CCCCeEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45688877654 46666 56888899999999988754
No 108
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=50.73 E-value=1.2e+02 Score=25.83 Aligned_cols=108 Identities=18% Similarity=0.155 Sum_probs=61.2
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH----hccEEEEcCCC-CCCcHHHHHHHHc---CCce
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA----GADFILIPSRF-EPCGLIQLHAMRY---GTVP 504 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~----~aDv~v~pS~~-E~~gl~~lEAma~---G~Pv 504 (612)
.+++|+.+.. ...+.+.++..+.+-.+.. ..-+...+...+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 37 ~~Ilivdd~~-~~~~~l~~~L~~~g~~v~~-~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~i 114 (157)
T 3hzh_A 37 FNVLIVDDSV-FTVKQLTQIFTSEGFNIID-TAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARV 114 (157)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCE
T ss_pred eEEEEEeCCH-HHHHHHHHHHHhCCCeEEE-EECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcE
Confidence 4666666543 3444455544444422211 2223343333333 45888876654 3456766666543 5777
Q ss_pred EEcCCCC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 505 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 505 I~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
|+-.... ..+.++.|..+++. .|.+.++|.+.|.+++.
T Consensus 115 i~ls~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 115 IMISALGKEQLVKDCLIKGAKTFIV----------KPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp EEEESCCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHTTC
T ss_pred EEEeccCcHHHHHHHHHcCCCEEEe----------CCCCHHHHHHHHHHHhc
Confidence 6543222 22344567888876 89999999999987653
No 109
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=50.61 E-value=10 Score=36.64 Aligned_cols=38 Identities=26% Similarity=0.287 Sum_probs=29.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..- . .+.-+..|.++|.+.| +|+|++|..++
T Consensus 1 M~ILlTNDDG-i------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (244)
T 2e6c_A 1 MRILVTNDDG-I------YSPGLWALAEAASQFG-EVFVAAPDTEQ 38 (244)
T ss_dssp CEEEEECSSC-T------TCHHHHHHHHHHTTTS-EEEEEEECSSC
T ss_pred CeEEEEcCCC-C------CcHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 8999988762 2 2234678999999988 99999998654
No 110
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=50.31 E-value=9.2 Score=38.32 Aligned_cols=37 Identities=27% Similarity=0.337 Sum_probs=24.8
Q ss_pred cCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..++|+|++.+. +|++| ..|++.|.++||+|.++...
T Consensus 16 ~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 16 PRGSHMILVTGS-------AGRVG---RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp -----CEEEETT-------TSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred ccCCCEEEEECC-------CChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 345788887664 46666 56788899999999888654
No 111
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=50.30 E-value=10 Score=38.21 Aligned_cols=35 Identities=31% Similarity=0.381 Sum_probs=26.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+.|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 1 M~~mkI~IiGa--------G~~G---~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MSLTRICIVGA--------GAVG---GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp -CCCCEEEESC--------CHHH---HHHHHHHHHTTCCEEEECCH
T ss_pred CCCCEEEEECc--------CHHH---HHHHHHHHHCCCEEEEEECh
Confidence 45699999983 5555 35677789999999998753
No 112
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=50.15 E-value=1.1e+02 Score=25.78 Aligned_cols=109 Identities=16% Similarity=0.157 Sum_probs=67.4
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHH-----cCCc
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-----YGTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma-----~G~P 503 (612)
..+++|+.+.. .....+.++....+-.+ ...-+...+...+. ..|++++-... +.-|+.+++.+. ..+|
T Consensus 7 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v--~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (154)
T 3gt7_A 7 AGEILIVEDSP-TQAEHLKHILEETGYQT--EHVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIP 83 (154)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHTTTCEE--EEESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSC
T ss_pred CCcEEEEeCCH-HHHHHHHHHHHHCCCEE--EEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCC
Confidence 45677776543 34455555555444223 22234444444443 36888876654 446778887775 3567
Q ss_pred eEEcCC-CC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 504 PIVAST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~-gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+|+-.. .. ..+.+..|..+++. .|-+.+++...|.+++..
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~~ 127 (154)
T 3gt7_A 84 VILLTILSDPRDVVRSLECGADDFIT----------KPCKDVVLASHVKRLLSG 127 (154)
T ss_dssp EEEEECCCSHHHHHHHHHHCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHCCCCEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 765432 22 22344567888876 899999999999999875
No 113
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=49.79 E-value=9.4 Score=37.62 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=24.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+|+|++++. +|++| ..|++.|.++||+|.++..
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGA-------TGLLG---RAVHKEFQQNNWHAVGCGF 34 (315)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEEC-
T ss_pred CCeEEEECC-------CcHHH---HHHHHHHHhCCCeEEEEcc
Confidence 578776654 46666 5678889999999988863
No 114
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=49.68 E-value=7 Score=38.66 Aligned_cols=34 Identities=15% Similarity=0.314 Sum_probs=24.5
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
|++|||++++. +|++| ..|++.|.++||+|.++.
T Consensus 1 M~~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 1 MAKQRVFIAGH-------RGMVG---SAIRRQLEQRGDVELVLR 34 (321)
T ss_dssp -CCEEEEEETT-------TSHHH---HHHHHHHTTCTTEEEECC
T ss_pred CCCCEEEEECC-------CcHHH---HHHHHHHHhCCCeEEEEe
Confidence 45688877654 46666 567888999999987764
No 115
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=49.64 E-value=9.2 Score=38.06 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=24.0
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCC--CeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G--h~V~vit~ 126 (612)
|++|||++.+. +|++| ..|++.|.++| |+|.++..
T Consensus 1 M~~m~vlVTGa-------tG~iG---~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTGG-------MGFIG---SNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEETT-------TSHHH---HHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEECC-------CchHH---HHHHHHHHHhCCCCEEEEEec
Confidence 45689776653 46666 56788888886 88888764
No 116
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=49.48 E-value=10 Score=35.66 Aligned_cols=37 Identities=16% Similarity=0.258 Sum_probs=26.8
Q ss_pred ccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..|+.|||.+|+. |.+| ..++..|++.||+|+++..+
T Consensus 19 ~~m~mmkI~IIG~--------G~mG---~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 19 YFQSMTTYAIIGA--------GAIG---SALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp TGGGSCCEEEEEC--------HHHH---HHHHHHHHHTTCCEEEECTT
T ss_pred hhhcCCEEEEECC--------CHHH---HHHHHHHHhCCCEEEEEECC
Confidence 3355689999983 3333 56888899999999885433
No 117
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=49.42 E-value=18 Score=31.22 Aligned_cols=38 Identities=26% Similarity=0.338 Sum_probs=31.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+++... .+|....+...+++.|.+.|++|.++...
T Consensus 2 ~ki~I~y~S-----~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGS-----STGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEEC-----SSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEEC-----CCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 688887653 37888999999999999999999988654
No 118
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=49.40 E-value=11 Score=36.56 Aligned_cols=38 Identities=26% Similarity=0.370 Sum_probs=29.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..- . .+.-+..|.++|.+.| +|+|++|..++
T Consensus 2 M~ILlTNDDG-i------~apGi~aL~~~l~~~g-~V~VVAP~~~~ 39 (251)
T 2phj_A 2 PTFLLVNDDG-Y------FSPGINALREALKSLG-RVVVVAPDRNL 39 (251)
T ss_dssp CEEEEECSSC-T------TCHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CEEEEECCCC-C------CCHHHHHHHHHHHhcC-CEEEEecCCCc
Confidence 9999998762 1 2334678999999998 99999998554
No 119
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=49.29 E-value=11 Score=37.85 Aligned_cols=33 Identities=39% Similarity=0.605 Sum_probs=25.2
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+ .|.+|. .++..|++.||+|+++...
T Consensus 2 ~mkI~IiG--------aGaiG~---~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIG--------TGAIGS---FYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEES--------CCHHHH---HHHHHHHHTTCEEEEECST
T ss_pred CCEEEEEC--------cCHHHH---HHHHHHHhCCCeEEEEeCC
Confidence 59999998 366663 4667789999999998764
No 120
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=49.23 E-value=22 Score=34.71 Aligned_cols=122 Identities=12% Similarity=0.153 Sum_probs=47.6
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v 482 (612)
.+|+|++.-.. -.-+.++++++++++.++.+-++|=|. ..-.+.+++++...+++ --..+.++.
T Consensus 109 rIIlf~ds~~~-~~~~~l~~lak~lkk~gI~v~vIgFG~~~~n~~kLe~l~~~~Ng~--------------~~~~s~~v~ 173 (268)
T 4b4t_W 109 RIVAFVCSPIS-DSRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNNP--------------QEETSHLLT 173 (268)
T ss_dssp EEEEEECSCCS-SCHHHHHHHHHHHHHHTEEEEEEEESSCCSSCCHHHHHHHHHCSS--------------TTTSCEEEE
T ss_pred EEEEEECCCCC-CCHHHHHHHHHHHHHcCCEEEEEEeCCCccchHHHHHHHHHhcCC--------------CCCceeEEE
Confidence 47777765432 255678888888888899988888764 22334566665543210 012344555
Q ss_pred EcCCCCCCcHHHHHHHHcCCceEEcCCCCc-------ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGL-------VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~-------~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+|+- +..+.+.+.. .|++.-+-++. ..-...+..+|-|| |||..-.+||-+|+--++.
T Consensus 174 v~~g----~~~lsd~l~~-s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~dp~~dpela~alr~s~ee 238 (268)
T 4b4t_W 174 VTPG----PRLLYENIAS-SPIILEEGSSGMGAFGGSGGDSDANGTFMDFG--------VDPSMDPELAMALRLSMEE 238 (268)
T ss_dssp ECCC----SSCHHHHHHT-STTSCCCCC--------------------------------------------------
T ss_pred eCCC----CccHHHHHhc-CCccccCCccccccccccccccccCCcccccC--------CCCCCCHHHHHHHHHhHHH
Confidence 5542 3334555444 45543321110 00001111223221 3788788999999877775
No 121
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=49.09 E-value=12 Score=36.86 Aligned_cols=34 Identities=26% Similarity=0.416 Sum_probs=24.6
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+.|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 2 ~~m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 2 NAMKIAIAGA--------GAMG---SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp --CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECc--------CHHH---HHHHHHHHhCCCcEEEEECC
Confidence 3589999983 4444 45678899999999988654
No 122
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=48.98 E-value=11 Score=36.44 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=29.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..- .. +.-+..|.++|.+.| +|+|++|..++
T Consensus 1 M~ILlTNDDG-i~------apGi~aL~~~l~~~g-~V~VVAP~~~~ 38 (247)
T 1j9j_A 1 MRILVTNDDG-IQ------SKGIIVLAELLSEEH-EVFVVAPDKER 38 (247)
T ss_dssp CEEEEECSSC-TT------CHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CeEEEEcCCC-CC------cHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 8999988762 21 234678999999988 99999998654
No 123
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=48.67 E-value=1.2e+02 Score=25.41 Aligned_cols=109 Identities=13% Similarity=0.128 Sum_probs=67.0
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCC--ceEEEeccChHHHHHHH-----------HhccEEEEcCCC-CCCcHHHHHH
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPE--KARGVAKFNIPLAHMII-----------AGADFILIPSRF-EPCGLIQLHA 497 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~--~v~~~~~~~~~~~~~i~-----------~~aDv~v~pS~~-E~~gl~~lEA 497 (612)
..+++|+.+.+ .....++++....+. .+. ..-+...+...+ ...|++++-... +.-|+.+++.
T Consensus 4 ~~~ILivddd~-~~~~~l~~~L~~~g~~~~v~--~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~ 80 (152)
T 3heb_A 4 SVTIVMIEDDL-GHARLIEKNIRRAGVNNEII--AFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKL 80 (152)
T ss_dssp -CEEEEECCCH-HHHHHHHHHHHHTTCCCCEE--EESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHH
T ss_pred CceEEEEeCCH-HHHHHHHHHHHhCCCcceEE--EeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHH
Confidence 35677776543 455556666555553 233 223455554454 246888876654 4567888887
Q ss_pred HHc-----CCceEEcCC-CC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 498 MRY-----GTVPIVAST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 498 ma~-----G~PvI~s~~-gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+.. .+|+|+-.. .. ..+.++.|..+++. .|.+.++|.++|.++...
T Consensus 81 lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 135 (152)
T 3heb_A 81 VKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYIT----------KPVNYENFANAIRQLGLF 135 (152)
T ss_dssp HHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHHH
T ss_pred HHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 765 567765432 22 22344567888876 899999999999888553
No 124
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=48.54 E-value=1e+02 Score=25.17 Aligned_cols=106 Identities=12% Similarity=0.213 Sum_probs=56.7
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCCCCCcHHHHHHHHc---CCceEE
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFEPCGLIQLHAMRY---GTVPIV 506 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~E~~gl~~lEAma~---G~PvI~ 506 (612)
..+++|+.+.. .....+.++....+-.+. ..-+.+.+...+. ..|++++| +.-|+.+++.+.. .+|+|+
T Consensus 18 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~dlvi~~---~~~g~~~~~~l~~~~~~~~ii~ 91 (137)
T 2pln_A 18 SMRVLLIEKNS-VLGGEIEKGLNVKGFMAD--VTESLEDGEYLMDIRNYDLVMVS---DKNALSFVSRIKEKHSSIVVLV 91 (137)
T ss_dssp CSEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHHHHHSCCSEEEEC---STTHHHHHHHHHHHSTTSEEEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHHcCcEEE--EeCCHHHHHHHHHcCCCCEEEEc---CccHHHHHHHHHhcCCCccEEE
Confidence 45566665433 233344444433332222 2223333333332 35777722 3346666666543 677765
Q ss_pred cC-CCC---cccceecCcceEEecccccccccCCCC-CHHHHHHHHHHHHHh
Q 007212 507 AS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPV-DVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~-d~~~la~~i~~ll~~ 553 (612)
-. ... ..+.+..|..+++. .|. +.++|...|..++..
T Consensus 92 ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 92 SSDNPTSEEEVHAFEQGADDYIA----------KPYRSIKALVARIEARLRF 133 (137)
T ss_dssp EESSCCHHHHHHHHHTTCSEEEE----------SSCSCHHHHHHHHHHHTC-
T ss_pred EeCCCCHHHHHHHHHcCCceeee----------CCCCCHHHHHHHHHHHHhh
Confidence 43 222 23344567788876 888 999999999887754
No 125
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=47.83 E-value=11 Score=38.09 Aligned_cols=36 Identities=17% Similarity=0.272 Sum_probs=26.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhC-CCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~ 127 (612)
|++|||++++. +|++| ..|+++|.++ ||+|.++...
T Consensus 22 m~~~~vlVtGa-------tG~iG---~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 22 MKAKKVLILGV-------NGFIG---HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -CCCEEEEESC-------SSHHH---HHHHHHHHHHSSCEEEEEESC
T ss_pred cCCCEEEEECC-------CChHH---HHHHHHHHhCCCCEEEEEeCC
Confidence 55678877664 46666 5678889988 9999998754
No 126
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=47.76 E-value=16 Score=34.31 Aligned_cols=38 Identities=24% Similarity=0.083 Sum_probs=29.6
Q ss_pred CCCceEEEEEecccCccccccHHHH--hhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~--~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+++||++-- +||...| ...|.+.|.+.|++|.|+.+.
T Consensus 3 l~~k~Illgi--------TGsiaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 3 LKGKRIGFGF--------TGSHCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp CTTCEEEEEE--------CSCGGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCEEEEEE--------EChHHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 3467887765 4555666 678999999999999999876
No 127
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=47.52 E-value=6 Score=38.48 Aligned_cols=33 Identities=18% Similarity=0.336 Sum_probs=24.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+|||++++. +|++| ..+++.|.++||+|.+++.
T Consensus 5 ~m~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 5 KERVIITGA-------NGQLG---KQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp CEEEEEEST-------TSHHH---HHHHHHSCTTTEEEEEECT
T ss_pred eeEEEEECC-------CCHHH---HHHHHHHHhCCCEEEEecc
Confidence 467777654 46666 5678889999999988864
No 128
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=47.27 E-value=11 Score=37.09 Aligned_cols=34 Identities=35% Similarity=0.505 Sum_probs=25.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..|++.|.++||+|.+++..
T Consensus 7 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGG-------AGFIG---GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEECC-------CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 577776654 46666 56888899999999988754
No 129
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=46.72 E-value=22 Score=29.86 Aligned_cols=39 Identities=21% Similarity=0.029 Sum_probs=29.2
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|++|+... +|+ ..-.+.-..+++.++.+.||+|.|+-..
T Consensus 3 k~~~vv~~-~P~--g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 3 RIAFVFST-APH--GTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp CEEEEECS-CTT--TSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred EEEEEEcC-CCC--CcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 58888876 676 2333445568889999999999988765
No 130
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=46.67 E-value=1.7e+02 Score=30.59 Aligned_cols=136 Identities=14% Similarity=0.074 Sum_probs=74.7
Q ss_pred CCcEEEEEccCccccCHHHHHHHHHhccc----CCeEEEEEecCChhHHHHHHHHHHH------CCCceEEEe-cc----
Q 007212 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEIL------YPEKARGVA-KF---- 466 (612)
Q Consensus 402 ~~~~i~~iGrl~~~Kg~d~li~A~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~------~~~~v~~~~-~~---- 466 (612)
...+++|.|.-.. + +...+++.++-+ .++.+ +.|.|+.-|+......... .++.+.++. .+
T Consensus 144 ~~~ivVv~GSs~~--~-~~~Ye~A~eLGr~LA~~G~~L-VtGGG~GlMEaa~aGA~~a~s~qr~~GG~vIGIiP~~L~~~ 219 (460)
T 3bq9_A 144 EPNMVVCWGGHSI--N-EIEYKYTKDVGYHIGLRGLNI-CTGCGPGAMKGPMKGATIGHAKQRVEGGRYLGLTEPGIIAA 219 (460)
T ss_dssp CSCEEEEECCSSC--C-HHHHHHHHHHHHHHHHTTCEE-EECCSSGGGTHHHHHHHHHHHHTTCSSCCEEEEECTTTTTT
T ss_pred CCCEEEEEcCCCC--C-CHHHHHHHHHHHHHHHCCCEE-EeCCcHHHhhHHHhhHHhhcccccCCCCEEEEEeChhhhhh
Confidence 3357777776442 2 222244444432 56655 4566664454555555544 344555543 11
Q ss_pred -------------C--hHHHHHHHHhccEEEEcCCCCCCcHH--HHHHHH---------cCCceEEcC---CCCccc---
Q 007212 467 -------------N--IPLAHMIIAGADFILIPSRFEPCGLI--QLHAMR---------YGTVPIVAS---TGGLVD--- 514 (612)
Q Consensus 467 -------------~--~~~~~~i~~~aDv~v~pS~~E~~gl~--~lEAma---------~G~PvI~s~---~gg~~e--- 514 (612)
. ......+...||.+|.-. -|+|.- ++|++. .++|||..+ +.|..+
T Consensus 220 E~~N~~vtelIiv~~m~eRK~~mv~~SDAfIaLP--GG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll 297 (460)
T 3bq9_A 220 EPPNPIVNELVILPDIEKRLEAFVRCAHGIVIFP--GGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALD 297 (460)
T ss_dssp SCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECS--CSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHH
T ss_pred hhcCCCCCeEEEECCHHHHHHHHHHhCCEEEEcC--CCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHH
Confidence 0 011224678899887643 357775 888887 588999875 233222
Q ss_pred -cee----c-CcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 515 -TVE----E-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 515 -~v~----~-g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
++. + ....+++ -.+|++++++.+...+..
T Consensus 298 ~~l~~~l~~~~~~~~ii----------v~ddpeEal~~l~~~~~~ 332 (460)
T 3bq9_A 298 EFIGATIGDEARQLYKI----------IIDDPAAVAQHMHAGMAA 332 (460)
T ss_dssp HHHHHHTCTTGGGGCEE----------EESCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcchhhcCcEE----------EeCCHHHHHHHHHHHHHH
Confidence 211 1 1112221 358999999999887765
No 131
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=46.43 E-value=16 Score=34.76 Aligned_cols=34 Identities=26% Similarity=0.524 Sum_probs=25.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 1 mk~vlVTGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGC------ATGIG---AATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 676677632 57777 56888899999999887643
No 132
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=46.25 E-value=1.2e+02 Score=24.64 Aligned_cols=110 Identities=11% Similarity=0.061 Sum_probs=66.6
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH---------hccEEEEcCCC-CCCcHHHHHHHH---
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---------GADFILIPSRF-EPCGLIQLHAMR--- 499 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~---------~aDv~v~pS~~-E~~gl~~lEAma--- 499 (612)
.+++|+.+.. ...+.+.+.-...+........-+...+...+. ..|++++-... +.-|+.+++.+.
T Consensus 3 ~~ilivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~ 81 (140)
T 1k68_A 3 KKIFLVEDNK-ADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSDP 81 (140)
T ss_dssp CEEEEECCCH-HHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHST
T ss_pred CeEEEEeCCH-HHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcCc
Confidence 4566666543 445555555555443112222234455444554 47888876655 446777777775
Q ss_pred --cCCceEEcC-CCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 500 --YGTVPIVAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 500 --~G~PvI~s~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
..+|+|+-. ... ..+.++.|..+++. .|-+.+++.+.|.+++..
T Consensus 82 ~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 131 (140)
T 1k68_A 82 TLKRIPVVVLSTSINEDDIFHSYDLHVNCYIT----------KSANLSQLFQIVKGIEEF 131 (140)
T ss_dssp TGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHHH
T ss_pred ccccccEEEEecCCcHHHHHHHHHhchhheec----------CCCCHHHHHHHHHHHHHH
Confidence 356776443 222 23344567788876 899999999999988764
No 133
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=46.22 E-value=12 Score=36.80 Aligned_cols=38 Identities=21% Similarity=0.152 Sum_probs=29.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..- .. +.-+..|.++|.+.| +|+|++|..++
T Consensus 1 M~ILlTNDDG-i~------ApGi~aL~~aL~~~g-~V~VVAP~~~q 38 (280)
T 1l5x_A 1 MKILVTNDDG-VH------SPGLRLLYQFALSLG-DVDVVAPESPK 38 (280)
T ss_dssp CEEEEECSSC-TT------CHHHHHHHHHHGGGS-EEEEEEESSCT
T ss_pred CeEEEEcCCC-CC------cHhHHHHHHHHHhCC-CEEEEecCCCC
Confidence 8999998763 22 234668899999988 99999998654
No 134
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=46.13 E-value=11 Score=34.72 Aligned_cols=35 Identities=23% Similarity=0.322 Sum_probs=26.1
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCC--eEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh--~V~vit~~ 127 (612)
++|+|++++. +|++| ..+++.|.++|| +|.+++.+
T Consensus 4 ~~~~vlVtGa-------tG~iG---~~l~~~l~~~g~~~~V~~~~r~ 40 (215)
T 2a35_A 4 TPKRVLLAGA-------TGLTG---EHLLDRILSEPTLAKVIAPARK 40 (215)
T ss_dssp CCCEEEEECT-------TSHHH---HHHHHHHHHCTTCCEEECCBSS
T ss_pred CCceEEEECC-------CcHHH---HHHHHHHHhCCCCCeEEEEeCC
Confidence 4678877664 47776 567888999999 88877644
No 135
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=45.92 E-value=1.2e+02 Score=24.81 Aligned_cols=107 Identities=11% Similarity=0.080 Sum_probs=59.8
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--HhccEEEEcCCC-CCCcHHHHHHHH-----cCCce
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMR-----YGTVP 504 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~aDv~v~pS~~-E~~gl~~lEAma-----~G~Pv 504 (612)
.+++|+.+.. .....+.++.... ..+. ..-+...+...+ ...|++++-... +.-|+.+++.+. ..+|+
T Consensus 4 ~~iLivdd~~-~~~~~l~~~l~~~-~~v~--~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~i 79 (140)
T 3n53_A 4 KKILIIDQQD-FSRIELKNFLDSE-YLVI--ESKNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPL 79 (140)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTT-SEEE--EESSHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCE
T ss_pred CEEEEEeCCH-HHHHHHHHHHHhc-ceEE--EeCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCE
Confidence 3566666543 3444455544433 2222 222444433333 346888876654 345666666665 46777
Q ss_pred EEcCC----CCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 505 IVAST----GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~----gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|+-.. ....+.+..|..+++. .|.+.++|.+.|..++..
T Consensus 80 i~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 122 (140)
T 3n53_A 80 ILLFSSEHKEAIVNGLHSGADDYLT----------KPFNRNDLLSRIEIHLRT 122 (140)
T ss_dssp EEEECC----CTTTTTTCCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHhcCCCeeee----------CCCCHHHHHHHHHHHHhh
Confidence 64332 2233455667788876 899999999999998875
No 136
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=45.77 E-value=19 Score=31.06 Aligned_cols=38 Identities=21% Similarity=0.129 Sum_probs=30.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+++... + +|-...+...+++.+.+.|++|.++...
T Consensus 1 mki~iiy~S--~---~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 1 PKALIVYGS--T---TGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp CEEEEEEEC--S---SSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred CeEEEEEEC--C---cCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 788888642 3 6888888889999999999999887643
No 137
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=45.64 E-value=12 Score=35.24 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=26.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCC--eEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh--~V~vit~~ 127 (612)
|++|+|++.+. +||+| ..+++.|+++|| +|.++...
T Consensus 16 m~~~~vlVtGa-------sg~iG---~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGA-------SGETG---RVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECT-------TSHHH---HHHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEECC-------CcHHH---HHHHHHHHcCCCCCEEEEEEcC
Confidence 34577776654 57777 567888999999 99888754
No 138
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=45.63 E-value=13 Score=37.45 Aligned_cols=36 Identities=28% Similarity=0.251 Sum_probs=26.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|+|++.+. +|++| ..|++.|.++||+|.++...
T Consensus 7 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 7 WQGKRVFVTGH-------TGFKG---GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp HTTCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred hCCCEEEEECC-------CchHH---HHHHHHHHhCCCeEEEEeCC
Confidence 34688876654 46666 56788899999999888754
No 139
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=45.49 E-value=20 Score=35.48 Aligned_cols=43 Identities=19% Similarity=0.060 Sum_probs=30.1
Q ss_pred HHHHHHhccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007212 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 513 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 513 (612)
+.+++..+|++|--+.-+..--.+..++..|+|+|+..+|...
T Consensus 82 l~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~ 124 (288)
T 3ijp_A 82 PESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTTGFSK 124 (288)
T ss_dssp HHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCH
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCH
Confidence 3456789999996665333333356688999999998887544
No 140
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=45.49 E-value=14 Score=36.86 Aligned_cols=33 Identities=21% Similarity=0.251 Sum_probs=24.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+|+|++.+. +|++| ..|++.|.++||+|.++..
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 2 AEKVLVTGG-------AGYIG---SHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp CSEEEEETT-------TSHHH---HHHHHHHHHTTCCEEEEEC
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEec
Confidence 577776653 46666 5678889999999998864
No 141
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=45.16 E-value=24 Score=33.83 Aligned_cols=41 Identities=17% Similarity=0.225 Sum_probs=32.9
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
++.||.+||+.. ...-|-..++..|+++|+++|++|..+=|
T Consensus 18 ~~m~k~i~ItgT----~t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 18 YFQGHMLFISAT----NTNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp -CCCEEEEEEES----STTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred hhcCcEEEEEeC----CCCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 445899999875 23467888999999999999999988754
No 142
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=44.90 E-value=14 Score=35.76 Aligned_cols=39 Identities=21% Similarity=0.263 Sum_probs=29.2
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
.||||+.+..- .. +.-+..|.++|.+.| +|+|++|..++
T Consensus 1 ~M~ILlTNDDG-i~------apGi~aL~~~L~~~g-~V~VVAP~~~~ 39 (254)
T 2v4n_A 1 SMRILLSNDDG-VH------APGIQTLAKALREFA-DVQVVAPDRNR 39 (254)
T ss_dssp CCEEEEECSSC-TT------CHHHHHHHHHHTTTS-EEEEEEESSCC
T ss_pred CCeEEEEcCCC-CC------CHHHHHHHHHHHhCC-cEEEEeeCCCC
Confidence 48999998762 22 234668889998886 99999998654
No 143
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=44.87 E-value=12 Score=36.89 Aligned_cols=34 Identities=24% Similarity=0.183 Sum_probs=25.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 4 ~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 4 MEKIIIYGG-------TGYIG---KFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCCEEEETT-------TSTTH---HHHHHHHHHTTCCEEEEECC
T ss_pred ccEEEEEcC-------CchhH---HHHHHHHHhCCCcEEEEECC
Confidence 467776654 46666 46788899999999988754
No 144
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=44.86 E-value=1.3e+02 Score=24.59 Aligned_cols=109 Identities=15% Similarity=0.169 Sum_probs=65.6
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--HhccEEEEcCCC-CCCcHHHHHHHHc---CCceE
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY---GTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI 505 (612)
..+++|+.+.. .....+.++.......+.... +...+...+ ...|++++-... +.-|+.+++.+.. .+|+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~~~~v~~~~--~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (137)
T 3hdg_A 7 ALKILIVEDDT-DAREWLSTIISNHFPEVWSAG--DGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVI 83 (137)
T ss_dssp CCCEEEECSCH-HHHHHHHHHHHTTCSCEEEES--SHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEE
T ss_pred ccEEEEEeCCH-HHHHHHHHHHHhcCcEEEEEC--CHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEE
Confidence 45677777654 344445555444332233222 334333333 346888876654 4467777776654 56776
Q ss_pred EcCCCC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 506 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+-.... ..+.+..|..+++. .|-+.++|.+.|.++++.
T Consensus 84 ~~s~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 125 (137)
T 3hdg_A 84 VISAFSEMKYFIKAIELGVHLFLP----------KPIEPGRLMETLEDFRHI 125 (137)
T ss_dssp ECCCCCCHHHHHHHHHHCCSEECC----------SSCCHHHHHHHHHHHHHH
T ss_pred EEecCcChHHHHHHHhCCcceeEc----------CCCCHHHHHHHHHHHHHH
Confidence 554322 22345567788864 899999999999999875
No 145
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=44.77 E-value=16 Score=36.90 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=24.8
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+.|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 2 m~~mki~iiG~--------G~~G---~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGL--------GNGG---HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECC--------CHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 45689999983 5555 34677789999999887643
No 146
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=44.58 E-value=21 Score=32.51 Aligned_cols=39 Identities=10% Similarity=0.195 Sum_probs=29.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+.|+.. ...-|-.+...+|+..|+++|++|.++-..
T Consensus 1 M~vi~v~s~----kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNP----KGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCS----STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeC----CCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 777777653 113466778889999999999999998754
No 147
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=44.37 E-value=15 Score=36.49 Aligned_cols=35 Identities=31% Similarity=0.380 Sum_probs=25.5
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|||++.+. +|++| ..|++.|.++||+|.++...
T Consensus 13 ~~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 13 MTRSALVTGI-------TGQDG---AYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp --CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEECC-------CChHH---HHHHHHHHHCCCeEEEEeCC
Confidence 4688876654 46666 56888899999999988754
No 148
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=44.21 E-value=18 Score=33.90 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=25.5
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhC--CCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~--Gh~V~vit~~ 127 (612)
++|+|++++. +||+| ..+++.|.++ ||+|.++...
T Consensus 3 ~~~~ilVtGa-------sG~iG---~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 3 NLPTVLVTGA-------SGRTG---QIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp SCCEEEEEST-------TSHHH---HHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCEEEEEcC-------CcHHH---HHHHHHHHhcCCCcEEEEEEcC
Confidence 4567766553 47776 5688889999 8999888754
No 149
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=44.00 E-value=8.6 Score=40.88 Aligned_cols=111 Identities=16% Similarity=0.166 Sum_probs=68.6
Q ss_pred EEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC------------------hhHHHHHHHHHHHCCCceEEEecc
Q 007212 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK------------------KPMEKQLEQLEILYPEKARGVAKF 466 (612)
Q Consensus 405 ~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~------------------~~~~~~l~~l~~~~~~~v~~~~~~ 466 (612)
.+.++|. .+.++.+.+.+....++.-+++|+|.|. +.-.++++.++.++++-+...+.-
T Consensus 211 ~v~~i~~---~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~ 287 (461)
T 4g65_A 211 EVFFVAA---SNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELENTIVFCGDA 287 (461)
T ss_dssp EEEEEEE---TTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCTTSEEEESCT
T ss_pred EEEEEec---cchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCCCceEEeccc
Confidence 3444443 4567777776665544444677888764 123467778888887655555554
Q ss_pred C-hHHHH-HHHHhccEEEEcCCC-CCCcHHHHHHHHcCCceEEcCC--CCcccceec
Q 007212 467 N-IPLAH-MIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST--GGLVDTVEE 518 (612)
Q Consensus 467 ~-~~~~~-~i~~~aDv~v~pS~~-E~~gl~~lEAma~G~PvI~s~~--gg~~e~v~~ 518 (612)
. .+.+. +=+..+|+++..+.. |.-=++.+-|-.+|++-+.+.. ....++++.
T Consensus 288 td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~ 344 (461)
T 4g65_A 288 ADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQG 344 (461)
T ss_dssp TCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCS
T ss_pred cchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccccccchhhhhhc
Confidence 3 33333 247899999988766 4444456678889998776653 344455544
No 150
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=43.99 E-value=2.1e+02 Score=26.91 Aligned_cols=36 Identities=14% Similarity=0.096 Sum_probs=23.5
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhC--CCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~--Gh~V~vit~~ 127 (612)
+.|||+|+... + +.....+.+++.+. +++|..+...
T Consensus 21 ~~~rI~~l~SG------~---g~~~~~~l~~l~~~~~~~~I~~Vvt~ 58 (229)
T 3auf_A 21 HMIRIGVLISG------S---GTNLQAILDGCREGRIPGRVAVVISD 58 (229)
T ss_dssp TCEEEEEEESS------C---CHHHHHHHHHHHTTSSSEEEEEEEES
T ss_pred CCcEEEEEEeC------C---cHHHHHHHHHHHhCCCCCeEEEEEcC
Confidence 34799999742 1 23566777788776 6787655544
No 151
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=43.97 E-value=9.8 Score=37.56 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=25.4
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+ .|.+|. .++..|++.||+|+++...
T Consensus 2 ~mkI~iiG--------aGa~G~---~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIG--------PGAVGT---TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEEC--------CSHHHH---HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEEC--------CCHHHH---HHHHHHHHCCCeEEEEEec
Confidence 59999998 366664 4666788899999999865
No 152
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=43.95 E-value=15 Score=36.56 Aligned_cols=32 Identities=28% Similarity=0.304 Sum_probs=24.7
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|||++|+ .|.+|. .++..|+ .||+|+++...
T Consensus 2 ~mkI~IiG--------aGa~G~---~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIG--------GGSVGL---LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEEC--------CSHHHH---HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEEC--------CCHHHH---HHHHHHh-cCCceEEEECC
Confidence 59999998 366664 4566688 89999998765
No 153
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=43.89 E-value=16 Score=33.97 Aligned_cols=33 Identities=21% Similarity=0.411 Sum_probs=24.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..+++.|.++||+|.+++..
T Consensus 5 ~~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLIGA-------SGFVG---SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEETC-------CHHHH---HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEEcC-------CchHH---HHHHHHHHHCCCEEEEEEcC
Confidence 67766553 46666 57888899999999988755
No 154
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=43.81 E-value=15 Score=34.60 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=28.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++ +.. + .-|-.+.+.+|+.+|+++|++|.++=..
T Consensus 1 mkI~v-s~k--G---GvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAV-AGK--G---GVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEE-ECS--S---SHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEE-ecC--C---CCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 88888 531 1 2355667788999999999999999765
No 155
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=43.81 E-value=18 Score=34.04 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=23.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- +||+| ..+++.|+++||+|.++...
T Consensus 1 Mk~vlVtGa------sg~iG---~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITGS------ASGIG---AALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEeCC------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 555555532 57776 56788899999999887643
No 156
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=43.79 E-value=17 Score=36.00 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=26.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|+|++.+. +|++| ..|++.|.++||+|.++...
T Consensus 9 ~~~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGA-------NGFVA---SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECC-------ccHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45678776654 46666 56788899999999887643
No 157
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=43.77 E-value=1.3e+02 Score=24.61 Aligned_cols=108 Identities=14% Similarity=0.125 Sum_probs=65.0
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc-----CCce
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTVP 504 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~Pv 504 (612)
.+++|+.+.. .....+..+....+-.+. ..-+...+-..+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 5 ~~iLivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pi 81 (136)
T 3t6k_A 5 HTLLIVDDDD-TVAEMLELVLRGAGYEVR--RAASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPI 81 (136)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCE
T ss_pred CEEEEEeCCH-HHHHHHHHHHHHCCCEEE--EeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccE
Confidence 4566666543 344555555544442232 2234444434443 45888876654 4457777777753 5677
Q ss_pred EEcC-CCCc---ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 505 IVAS-TGGL---VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~-~gg~---~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|+-. .+.. .+.+..|..+|+. .|-+.++|...|.+++..
T Consensus 82 i~~t~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 82 LMLTAQGDISAKIAGFEAGANDYLA----------KPFEPQELVYRVKNILAR 124 (136)
T ss_dssp EEEECTTCHHHHHHHHHHTCSEEEE----------TTCCHHHHHHHHHHHHHC
T ss_pred EEEecCCCHHHHHHHHhcCcceEEe----------CCCCHHHHHHHHHHHHhc
Confidence 6443 3222 2344567888876 899999999999998875
No 158
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=43.75 E-value=14 Score=37.66 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=26.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++.|||++|+. |..| ..++..|++.||+|+++...
T Consensus 27 ~~~mkI~VIGa--------G~mG---~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 27 PFKHPIAILGA--------GSWG---TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCCSCEEEECC--------SHHH---HHHHHHHHTTTCCEEEECSC
T ss_pred ccCCeEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 45699999984 4444 45788899999999988754
No 159
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=43.63 E-value=16 Score=34.09 Aligned_cols=39 Identities=18% Similarity=0.055 Sum_probs=29.7
Q ss_pred CCCceEEEEEecccCccccccHHHH--hhchHHHHHhCCCeEEEEEecC
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~--~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
.+++||++-- +|+.+.+ ...|.+.|.+.|++|.|+.+.-
T Consensus 5 l~~k~I~lgi--------TGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~ 45 (201)
T 3lqk_A 5 FAGKHVGFGL--------TGSHCTYHEVLPQMERLVELGAKVTPFVTHT 45 (201)
T ss_dssp CTTCEEEEEC--------CSCGGGGGGTHHHHHHHHHTTCEEEEECSSC
T ss_pred cCCCEEEEEE--------EChHHHHHHHHHHHHHHhhCCCEEEEEEChh
Confidence 3467777654 4555555 8889999999999999998763
No 160
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=43.47 E-value=12 Score=37.24 Aligned_cols=33 Identities=33% Similarity=0.429 Sum_probs=23.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |.+|. .++..|++.||+|+++...
T Consensus 2 ~mkI~IiGa--------GaiG~---~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGA--------GALGL---YYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp --CEEEECC--------STTHH---HHHHHHHHTSCCEEEECST
T ss_pred CCEEEEECc--------CHHHH---HHHHHHHHCCCeEEEEEcC
Confidence 589999984 55553 4567789999999998764
No 161
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=43.43 E-value=16 Score=36.72 Aligned_cols=34 Identities=26% Similarity=0.484 Sum_probs=25.7
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+.|||.||+. |..| ..++..|++.||+|+++...
T Consensus 13 ~~~kI~iIG~--------G~mG---~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGA--------GSWG---TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred cCCcEEEECc--------CHHH---HHHHHHHHhCCCeEEEEeCC
Confidence 4799999983 5455 45777899999999888654
No 162
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=43.31 E-value=14 Score=37.00 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=25.7
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 26 ~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 26 QPKVWLITGV-------AGFIG---SNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp SCCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3577776553 46666 56788899999999988754
No 163
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=43.28 E-value=1.4e+02 Score=24.83 Aligned_cols=111 Identities=18% Similarity=0.231 Sum_probs=65.5
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc---CCceE
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI 505 (612)
..+++|+.+.. ...+.+..+....+........-+.+.+...+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 20 m~~iLivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii 98 (150)
T 4e7p_A 20 HMKVLVAEDQS-MLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVV 98 (150)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEE
T ss_pred ccEEEEEcCCH-HHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEE
Confidence 35666666543 344455555444432122222224444444443 35888876654 4567777776654 56665
Q ss_pred EcCC-C---CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 506 VAST-G---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~-g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+-.. . ...+.++.|..+++. .|.+.++|.++|.+++..
T Consensus 99 ~ls~~~~~~~~~~~~~~g~~~~l~----------Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 99 VVTTFKRAGYFERAVKAGVDAYVL----------KERSIADLMQTLHTVLEG 140 (150)
T ss_dssp EEESCCCHHHHHHHHHTTCSEEEE----------TTSCHHHHHHHHHHHHTT
T ss_pred EEeCCCCHHHHHHHHHCCCcEEEe----------cCCCHHHHHHHHHHHHcC
Confidence 4432 2 233455667888876 899999999999999875
No 164
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=43.10 E-value=16 Score=34.32 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=24.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 1 Mk~vlVTGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGA------SSGLG---AELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEEST------TSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777643 57777 57888999999999887654
No 165
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=42.99 E-value=15 Score=35.99 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=24.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++.+. +|++| ..|++.|.++||+|.++...
T Consensus 1 m~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGG-------AGFIG---SHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEECC-------CChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 67766553 46666 56888999999999888643
No 166
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=42.92 E-value=18 Score=36.46 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=26.4
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHh--CCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA--NGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~--~Gh~V~vit~~ 127 (612)
+++|+|++.+. +|++| ..|++.|.+ .||+|.++...
T Consensus 8 ~~~~~vlVTGa-------tG~IG---~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILITGG-------AGFVG---SNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CTTCEEEEETT-------TSHHH---HHHHHHHHHHCTTSEEEEEECC
T ss_pred cCCCEEEEECC-------CCHHH---HHHHHHHHhhCCCCeEEEEECC
Confidence 44677766653 46666 568888999 99999998753
No 167
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=42.84 E-value=22 Score=30.94 Aligned_cols=35 Identities=14% Similarity=0.056 Sum_probs=25.8
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|.+++|++++. |. +-..+++.|.+.||+|+++...
T Consensus 1 ~~~~~vlI~G~--------G~---vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH--------SI---LAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC--------SH---HHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC--------CH---HHHHHHHHHHHCCCCEEEEECC
Confidence 34577877752 32 3467888899999999999875
No 168
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=42.76 E-value=20 Score=33.67 Aligned_cols=36 Identities=31% Similarity=0.464 Sum_probs=25.8
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|+|++.+. .||+| ..+++.|+++|++|.++...
T Consensus 5 ~~~~~vlVTGa-------sggiG---~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 5 FSGLRALVTGA-------GKGIG---RDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CTTCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEeCC-------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34566655543 57777 56889999999999887644
No 169
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=42.74 E-value=13 Score=36.31 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=25.1
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 4 ~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIGA-------TGYIG---RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEEST-------TSTTH---HHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEEcC-------CcHHH---HHHHHHHHhCCCCEEEEECC
Confidence 467777664 46666 46788899999999887654
No 170
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=42.56 E-value=17 Score=38.94 Aligned_cols=34 Identities=26% Similarity=0.554 Sum_probs=26.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|||++++. +|++| ..|++.|.++||+|.+++..
T Consensus 147 ~m~VLVTGa-------tG~IG---~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGS-------RGLVG---RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 689887764 46666 56788899999999988755
No 171
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=42.41 E-value=14 Score=36.29 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=25.3
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 4 ~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVGG-------TGYIG---KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEEST-------TSTTH---HHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEcC-------CcHHH---HHHHHHHHhCCCcEEEEECC
Confidence 477777664 46666 46778899999999888754
No 172
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=42.37 E-value=28 Score=32.10 Aligned_cols=39 Identities=21% Similarity=0.074 Sum_probs=32.0
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|... | .|-...+...+++.+.+.|++|.++-..
T Consensus 6 mmkilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 6 PVKLAIVFYS--S---TGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCeEEEEEEC--C---CChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 4899999853 4 5778888888999999999999988754
No 173
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=42.29 E-value=1.4e+02 Score=24.30 Aligned_cols=109 Identities=19% Similarity=0.216 Sum_probs=65.7
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--h-ccEEEEcCCC-CCCcHHHHHHHHc----CCc
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--G-ADFILIPSRF-EPCGLIQLHAMRY----GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~-aDv~v~pS~~-E~~gl~~lEAma~----G~P 503 (612)
..+++|+.+.. .....+.++....+-.+.. .-+.......+. . .|++++-... +.-|+.+++.+.. .+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~~--~~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ 83 (136)
T 3hdv_A 7 RPLVLVVDDNA-VNREALILYLKSRGIDAVG--ADGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALS 83 (136)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCCEEE--ESSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCE
T ss_pred CCeEEEECCCH-HHHHHHHHHHHHcCceEEE--eCCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCC
Confidence 45677777654 3445555555554433433 223333333332 2 6788776654 4567888887754 356
Q ss_pred eEEcCC-CC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 504 PIVAST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~-gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+|+... .. ..+.+..|..+++. .|-+.++|.+.|+++...
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 127 (136)
T 3hdv_A 84 IIVVSGDTDVEEAVDVMHLGVVDFLL----------KPVDLGKLLELVNKELKI 127 (136)
T ss_dssp EEEEESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHC-
T ss_pred EEEEeCCCChHHHHHHHhCCcceEEe----------CCCCHHHHHHHHHHHhcC
Confidence 665432 22 23344567888876 899999999999998875
No 174
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=42.27 E-value=24 Score=32.58 Aligned_cols=25 Identities=12% Similarity=0.199 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHH-hCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALA-ANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~-~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+ +.||+|.++...
T Consensus 14 sg~iG---~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 14 AGQIA---QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp TSHHH---HHHHHHHHHHCCCEEEEEESS
T ss_pred CcHHH---HHHHHHHHhcCCceEEEEecC
Confidence 57777 56788899 899999888754
No 175
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=41.83 E-value=1.2e+02 Score=25.67 Aligned_cols=32 Identities=16% Similarity=0.094 Sum_probs=21.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEE
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMT 123 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~v 123 (612)
.+.||||+|-.. | ....-+...|.+.|++++.
T Consensus 10 ~k~~rILiVDD~--~--------~~r~~l~~~L~~~G~~~v~ 41 (134)
T 3to5_A 10 NKNMKILIVDDF--S--------TMRRIVKNLLRDLGFNNTQ 41 (134)
T ss_dssp CTTCCEEEECSC--H--------HHHHHHHHHHHHTTCCCEE
T ss_pred CCCCEEEEEeCC--H--------HHHHHHHHHHHHcCCcEEE
Confidence 356999999875 2 2334566678889987543
No 176
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=41.75 E-value=23 Score=33.58 Aligned_cols=40 Identities=18% Similarity=0.109 Sum_probs=29.1
Q ss_pred CceEEEEEecccCcccccc-HHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGG-LGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG-~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|||++|... |. .++ ...+.....+.+.+.||+|.++-..
T Consensus 1 ~mkiLiI~gs--pr--~~S~t~~l~~~~~~~l~~~g~ev~~~dL~ 41 (228)
T 3tem_A 1 GKKVLIVYAH--QE--PKSFNGSLKNVAVDELSRQGCTVTVSDLY 41 (228)
T ss_dssp CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHHTCEEEEEETT
T ss_pred CCEEEEEEeC--CC--CCCHHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 5999999975 53 344 4455566777777889999998754
No 177
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=41.72 E-value=16 Score=37.25 Aligned_cols=30 Identities=23% Similarity=0.417 Sum_probs=23.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEE
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vi 124 (612)
.|||++|+.- | +|+ .+|..|+++|++|+|+
T Consensus 1 sm~V~IVGaG--p----aGl-----~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAG--I----GGT-----CLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCS--H----HHH-----HHHHHHHHTTCEEEEE
T ss_pred CCEEEEECcC--H----HHH-----HHHHHHHhCCCCEEEE
Confidence 3999999853 3 444 4778899999999988
No 178
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=41.56 E-value=19 Score=36.83 Aligned_cols=36 Identities=19% Similarity=0.338 Sum_probs=25.7
Q ss_pred cCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|+.|||.||+. |-+| ..++..|++.||+|.++...
T Consensus 19 Mm~~mkIgiIGl--------G~mG---~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 19 YFQSMQIGMIGL--------GRMG---ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp ---CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred hhcCCEEEEECc--------hHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 456799999983 4333 56888999999999887544
No 179
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=41.18 E-value=38 Score=29.86 Aligned_cols=41 Identities=20% Similarity=-0.039 Sum_probs=27.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
...||++++-.. |- .--..-..-.|+..|.++||+|+|.+-
T Consensus 4 ~~~m~~LilLGC--PE--~Pvq~p~~lYl~~~Lk~~G~~v~VA~n 44 (157)
T 1kjn_A 4 ESTGKALMVLGC--PE--SPVQIPLAIYTSHKLKKKGFRVTVTAN 44 (157)
T ss_dssp --CCEEEEECCC--SC--STTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccceeeeEEecC--CC--CcchhhHHHHHHHHHHhcCCeeEEecC
Confidence 346999988532 21 122344566788889999999988763
No 180
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=41.06 E-value=23 Score=32.21 Aligned_cols=38 Identities=18% Similarity=0.138 Sum_probs=30.9
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|... .|-...+...+++.+.+.|++|.++...
T Consensus 4 mmkilii~~S------~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG------YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC------SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC------ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 4899999764 4667888888889998899999988754
No 181
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=40.81 E-value=19 Score=36.46 Aligned_cols=35 Identities=34% Similarity=0.360 Sum_probs=26.1
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|+|++++. +|++| ..+++.|.++||+|.+++..
T Consensus 4 ~~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 38 (352)
T 1xgk_A 4 QKKTIAVVGA-------TGRQG---ASLIRVAAAVGHHVRAQVHS 38 (352)
T ss_dssp CCCCEEEEST-------TSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECC-------CCHHH---HHHHHHHHhCCCEEEEEECC
Confidence 3678876654 47776 46778899999999988754
No 182
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=40.74 E-value=24 Score=33.59 Aligned_cols=41 Identities=20% Similarity=0.277 Sum_probs=26.0
Q ss_pred cccccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 77 LMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 77 ~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
....+.++++|++.+. .||+| ..+++.|+++|++|.++..+
T Consensus 12 ~~~~~~~~k~vlVTGa-------s~gIG---~~~a~~l~~~G~~V~~~~r~ 52 (249)
T 1o5i_A 12 HMELGIRDKGVLVLAA-------SRGIG---RAVADVLSQEGAEVTICARN 52 (249)
T ss_dssp ----CCTTCEEEEESC-------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred hHHhccCCCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEcCC
Confidence 3344444555555443 57877 46888999999999877643
No 183
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=40.60 E-value=24 Score=34.46 Aligned_cols=39 Identities=26% Similarity=0.323 Sum_probs=28.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+.|+.. ...-|-.+.+.+|+.+|+++|++|.++=..
T Consensus 4 ~kvI~v~s~----KGGvGKTT~a~nLA~~La~~G~~VlliD~D 42 (286)
T 2xj4_A 4 TRVIVVGNE----KGGAGKSTIAVHLVTALLYGGAKVAVIDLD 42 (286)
T ss_dssp CEEEEECCS----SSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcC----CCCCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 566666543 113356678889999999999999888654
No 184
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=40.17 E-value=24 Score=33.31 Aligned_cols=34 Identities=32% Similarity=0.510 Sum_probs=25.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 3 ~k~vlVTGa------s~GIG---~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTGA------GSGLG---RALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEEST------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 566666643 57777 57889999999999877654
No 185
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=40.14 E-value=16 Score=36.00 Aligned_cols=32 Identities=25% Similarity=0.360 Sum_probs=24.1
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 13 ~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIFGG-------TGYIG---NHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEETT-------TSTTH---HHHHHHHHHTTCCEEEEECT
T ss_pred eEEEECC-------CchHH---HHHHHHHHHCCCcEEEEECC
Confidence 6776654 46666 46788899999999988754
No 186
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=40.07 E-value=1.5e+02 Score=29.68 Aligned_cols=103 Identities=9% Similarity=0.076 Sum_probs=66.2
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCe
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 433 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~ 433 (612)
|.|+.| +.+.|... -.+--.+++.+|-- +...|.|+|-+ ..=...++.++..+ ++
T Consensus 128 VINag~-~~~HPtQa----------------LaDl~Ti~e~~g~l---~glkva~vGD~--~rva~Sl~~~~~~~---G~ 182 (323)
T 3gd5_A 128 VINALT-DHEHPCQV----------------VADLLTIRENFGRL---AGLKLAYVGDG--NNVAHSLLLGCAKV---GM 182 (323)
T ss_dssp EEEEEC-SSCCHHHH----------------HHHHHHHHHHHSCC---TTCEEEEESCC--CHHHHHHHHHHHHH---TC
T ss_pred EEeCCC-CCCCcHHH----------------HHHHHHHHHHhCCC---CCCEEEEECCC--CcHHHHHHHHHHHc---CC
Confidence 567777 67777531 12234567777732 23689999987 44467788888777 78
Q ss_pred EEEEEecCC----hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCC
Q 007212 434 QIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 434 ~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
++.+++... +.+.+.+++.+.+.+..+.... + +.+.+..||++.....
T Consensus 183 ~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~--d---~~eav~~aDvvyt~~w 234 (323)
T 3gd5_A 183 SIAVATPEGFTPDPAVSARASEIAGRTGAEVQILR--D---PFEAARGAHILYTDVW 234 (323)
T ss_dssp EEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES--C---HHHHHTTCSEEEECCC
T ss_pred EEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEC--C---HHHHhcCCCEEEEece
Confidence 999999743 3445556666555554454332 2 2346899999887654
No 187
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=39.92 E-value=25 Score=28.52 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=24.0
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCC-CeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G-h~V~vit~~ 127 (612)
+|+|++++. |++| ..+++.|.++| ++|.++...
T Consensus 5 ~~~v~I~G~--------G~iG---~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGA--------GKIG---QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECC--------SHHH---HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECC--------CHHH---HHHHHHHHhCCCceEEEEeCC
Confidence 578887762 4555 45778899999 998887654
No 188
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=39.65 E-value=1.7e+02 Score=24.47 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=62.4
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh---ccEEEEcCCC-CCCcHHHHHHHH---cCCce
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG---ADFILIPSRF-EPCGLIQLHAMR---YGTVP 504 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~---aDv~v~pS~~-E~~gl~~lEAma---~G~Pv 504 (612)
.++++|+.+.+ .....+..+....++.......-+...+...+.. .|++++-... +.-|+.+++.+. ..+|+
T Consensus 3 ~~~iLivdd~~-~~~~~l~~~L~~~~g~~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 81 (154)
T 2qsj_A 3 LTVVLIVDDHH-LIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAV 81 (154)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEE
T ss_pred ccEEEEEcCCH-HHHHHHHHHHHhCCCceEEEEecCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeE
Confidence 35677776543 3445555555444222122222344554455544 6888876654 335676676665 36777
Q ss_pred EEcCCCC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 505 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|+-.... ..+.+..|..+++. .|.+.++|.+.|..++..
T Consensus 82 i~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~L~~~l~~~~~~ 124 (154)
T 2qsj_A 82 ALISGETDHELIRAALEAGADGFIP----------KSADPQVLIHAVSLILEG 124 (154)
T ss_dssp EEC-----CHHHHHHHHTTCCBBCC----------TTSCHHHHHHHHHHHHTT
T ss_pred EEEeCCCCHHHHHHHHHccCCEEEe----------CCCCHHHHHHHHHHHHcC
Confidence 7644322 22344567778864 889999999999998875
No 189
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=39.48 E-value=17 Score=34.75 Aligned_cols=35 Identities=26% Similarity=0.329 Sum_probs=24.5
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+++++|++.+. .||+| ..+++.|+++|++|.++..
T Consensus 19 ~~~k~vlItGa-------sggiG---~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 19 LAGKVALTTGA-------GRGIG---RGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp TTTCEEEETTT-------TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEeCC-------CchHH---HHHHHHHHHCCCEEEEEcC
Confidence 44555554432 47776 5688889999999988765
No 190
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=38.45 E-value=1.6e+02 Score=23.96 Aligned_cols=110 Identities=14% Similarity=0.168 Sum_probs=66.2
Q ss_pred CeEEEEEecCChhHHHHHHHHHHH-CCCc-eEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc-----C
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEIL-YPEK-ARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----G 501 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~-~~~~-v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~-----G 501 (612)
..+++|+.+.+ .....+..+-.. .+-. +.. .-+.+.+...+. ..|++++-... +.-|+.+++.+.. .
T Consensus 8 ~~~iLivdd~~-~~~~~l~~~L~~~~~~~~v~~--~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ 84 (143)
T 3cnb_A 8 DFSILIIEDDK-EFADMLTQFLENLFPYAKIKI--AYNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATAN 84 (143)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHHCTTCEEEE--ECSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTT
T ss_pred CceEEEEECCH-HHHHHHHHHHHhccCccEEEE--ECCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccC
Confidence 46777776544 344455555444 4433 222 223344333333 46888877655 3467778887765 5
Q ss_pred CceEEc-CCCCc---ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHhh
Q 007212 502 TVPIVA-STGGL---VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 502 ~PvI~s-~~gg~---~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~ 554 (612)
+|+|+- +.... .+.+..|..+++. .|.+.++|.+.|..++...
T Consensus 85 ~~ii~~s~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~~ 131 (143)
T 3cnb_A 85 IIVIAMTGALTDDNVSRIVALGAETCFG----------KPLNFTLLEKTIKQLVEQK 131 (143)
T ss_dssp SEEEEEESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHTT
T ss_pred CcEEEEeCCCCHHHHHHHHhcCCcEEEe----------CCCCHHHHHHHHHHHHHhh
Confidence 676643 33222 3344567788876 8899999999999998763
No 191
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=38.20 E-value=1.1e+02 Score=25.46 Aligned_cols=68 Identities=18% Similarity=0.305 Sum_probs=44.6
Q ss_pred HhccEEEEcCCCC-CCcHHHHHHHHc---CCceEEcC-CCC---cccceecCcceEEecccccccccCCCCCHHHHHHHH
Q 007212 476 AGADFILIPSRFE-PCGLIQLHAMRY---GTVPIVAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 476 ~~aDv~v~pS~~E-~~gl~~lEAma~---G~PvI~s~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i 547 (612)
...|++|+-.... .-|+.+++.+.. .+|+|+-. ... ..+.+..|..+++. .|.+.++|...|
T Consensus 66 ~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~L~~~i 135 (146)
T 4dad_A 66 DAFDILMIDGAALDTAELAAIEKLSRLHPGLTCLLVTTDASSQTLLDAMRAGVRDVLR----------WPLEPRALDDAL 135 (146)
T ss_dssp TTCSEEEEECTTCCHHHHHHHHHHHHHCTTCEEEEEESCCCHHHHHHHHTTTEEEEEE----------SSCCHHHHHHHH
T ss_pred CCCCEEEEeCCCCCccHHHHHHHHHHhCCCCcEEEEeCCCCHHHHHHHHHhCCceeEc----------CCCCHHHHHHHH
Confidence 3568888765543 345666665543 56776443 222 23345567788876 899999999999
Q ss_pred HHHHHh
Q 007212 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
.+++..
T Consensus 136 ~~~~~~ 141 (146)
T 4dad_A 136 KRAAAQ 141 (146)
T ss_dssp HHHHHT
T ss_pred HHHHhh
Confidence 998874
No 192
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=38.17 E-value=19 Score=35.32 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=23.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|||++.+. +|++| ..+++.|.++||+|.++..
T Consensus 1 m~vlVTGa-------tG~iG---~~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTGG-------AGFIG---SHIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEECC
T ss_pred CEEEEEeC-------CcHHH---HHHHHHHHHCCCEEEEEEC
Confidence 67665543 46666 5678889999999988753
No 193
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=38.09 E-value=38 Score=28.08 Aligned_cols=43 Identities=14% Similarity=0.228 Sum_probs=28.9
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCc
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~ 130 (612)
.+.|||++++.. ....+..+..+-++..++|.+|.+.+..+..
T Consensus 4 ~~~mkIlL~C~a------GmSTsllv~km~~~a~~~gi~v~i~a~~~~~ 46 (108)
T 3nbm_A 4 SKELKVLVLCAG------SGTSAQLANAINEGANLTEVRVIANSGAYGA 46 (108)
T ss_dssp -CCEEEEEEESS------SSHHHHHHHHHHHHHHHHTCSEEEEEEETTS
T ss_pred ccCceEEEECCC------CCCHHHHHHHHHHHHHHCCCceEEEEcchHH
Confidence 357999999964 2334445555666666789999998755443
No 194
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=38.08 E-value=20 Score=33.68 Aligned_cols=25 Identities=28% Similarity=0.448 Sum_probs=20.1
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 12 s~gIG---~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 12 KGALG---SAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp TSHHH---HHHHHHHHHTTEEEEEEESS
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 57777 57888999999999887654
No 195
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=37.86 E-value=28 Score=32.49 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=25.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 2 ~k~vlITGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGA------SRGIG---EAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESC------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777743 57777 57899999999998777654
No 196
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=37.86 E-value=16 Score=35.59 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=25.0
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 2 ENKILILGP-------TGAIG---RHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCCEEEEST-------TSTTH---HHHHHHHHHHTCCEEEEECC
T ss_pred CcEEEEECC-------CchHH---HHHHHHHHhCCCcEEEEECC
Confidence 467776664 46666 45788899999999888754
No 197
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=37.44 E-value=28 Score=32.59 Aligned_cols=41 Identities=10% Similarity=0.044 Sum_probs=30.2
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhC-CCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~ 127 (612)
++|||+.|+..- ..-|-.+...+|+.+|+++ |++|.++=..
T Consensus 2 ~~~~vI~v~s~k----GGvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 2 NAKRVFGFVSAK----GGDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp -CCEEEEEEESS----TTSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCCeEEEEECCC----CCcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 457877776541 1346677888999999999 9999999754
No 198
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=37.31 E-value=2.3e+02 Score=28.03 Aligned_cols=107 Identities=15% Similarity=0.131 Sum_probs=68.1
Q ss_pred CeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcc
Q 007212 350 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 429 (612)
Q Consensus 350 ~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~ 429 (612)
.+.|| ||-+ +...|... -.+--.+++.+|-- +...|.|+|-. ...=...++.++..+
T Consensus 116 ~vPVI-Na~~-~~~HPtQa----------------LaDl~Ti~e~~g~l---~gl~va~vGD~-~~rva~Sl~~~~~~~- 172 (307)
T 2i6u_A 116 TVPVI-NALS-DEFHPCQV----------------LADLQTIAERKGAL---RGLRLSYFGDG-ANNMAHSLLLGGVTA- 172 (307)
T ss_dssp SSCEE-ESCC-SSCCHHHH----------------HHHHHHHHHHHSCC---TTCEEEEESCT-TSHHHHHHHHHHHHT-
T ss_pred CCCEE-cCCC-CCcCccHH----------------HHHHHHHHHHhCCc---CCeEEEEECCC-CcCcHHHHHHHHHHC-
Confidence 34444 6766 66777531 12234566677632 23689999987 445567888888887
Q ss_pred cCCeEEEEEecCC----hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCC
Q 007212 430 KENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 430 ~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
++++.+++... +.+.+.+++.+.+.+.++.... + +.+.+..||++.....
T Consensus 173 --g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~--d---~~eav~~aDvvy~~~w 226 (307)
T 2i6u_A 173 --GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVTA--D---AHAAAAGADVLVTDTW 226 (307)
T ss_dssp --TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEES--C---HHHHHTTCSEEEECCS
T ss_pred --CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE--C---HHHHhcCCCEEEecce
Confidence 89999999743 2344555666666664454331 2 2346899999887665
No 199
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=37.11 E-value=24 Score=35.85 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=24.9
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 29 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGA-------GGFIA---SHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEECC-------ccHHH---HHHHHHHHHCCCeEEEEECC
Confidence 467766553 46666 56788899999999888754
No 200
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=37.05 E-value=1.6e+02 Score=23.92 Aligned_cols=108 Identities=18% Similarity=0.209 Sum_probs=62.7
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC------CCCcHHHHHHHH---cC
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF------EPCGLIQLHAMR---YG 501 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~------E~~gl~~lEAma---~G 501 (612)
.+++|+.+.. .....+.+.....+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+. ..
T Consensus 4 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~ 80 (140)
T 2qr3_A 4 GTIIIVDDNK-GVLTAVQLLLKNHFSKVI--TLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRD 80 (140)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTTSSEEE--EECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTT
T ss_pred ceEEEEeCCH-HHHHHHHHHHHhCCcEEE--EeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcC
Confidence 4566666543 344455555444432232 2224444434443 35787775543 335666666664 36
Q ss_pred CceEEcCC-CC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 502 TVPIVAST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 502 ~PvI~s~~-gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+|+|+-.. .. ..+.+..|..+++. .|.+.++|.+.|..++..
T Consensus 81 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~l~~~~~~ 126 (140)
T 2qr3_A 81 LPVVLFTAYADIDLAVRGIKEGASDFVV----------KPWDNQKLLETLLNAASQ 126 (140)
T ss_dssp CCEEEEEEGGGHHHHHHHHHTTCCEEEE----------ESCCHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHcCchheee----------CCCCHHHHHHHHHHHHHh
Confidence 77765432 21 23344567788876 889999999999998875
No 201
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=36.92 E-value=34 Score=33.27 Aligned_cols=39 Identities=21% Similarity=0.155 Sum_probs=29.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||++.|+ . -+ .-|-.+.+.+|+.+|+++|++|.++=..
T Consensus 1 ~MkvIavs-~-KG---GvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 1 AMRQCAIY-G-KG---GIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CCEEEEEE-E-CT---TSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CceEEEEe-C-CC---cCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 48877775 2 22 3466778889999999999999988544
No 202
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=36.92 E-value=24 Score=33.97 Aligned_cols=37 Identities=19% Similarity=0.193 Sum_probs=27.1
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|..+|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 23 m~~~k~vlITGa------s~gIG---~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 23 MSDTPVVLVTGG------SRGIG---AAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp -CCSCEEEETTT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred ccCCCEEEEECC------CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 445677777743 57777 57889999999999777544
No 203
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=36.60 E-value=30 Score=33.10 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=24.0
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 8 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGA------AQGIG---RAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CCcHH---HHHHHHHHHCCCEEEEEECC
Confidence 55566532 57777 56888999999999887643
No 204
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=36.48 E-value=23 Score=35.09 Aligned_cols=31 Identities=29% Similarity=0.521 Sum_probs=23.0
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
|+|++.+. +|++| ..+++.|.++||+|.++.
T Consensus 1 m~vlVTGa-------tG~iG---~~l~~~L~~~G~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVTGG-------SGYIG---SHTCVQLLQNGHDVIILD 31 (338)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEe
Confidence 67665543 46666 568888999999998875
No 205
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=36.40 E-value=26 Score=34.67 Aligned_cols=33 Identities=27% Similarity=0.165 Sum_probs=23.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+|+|++.+. +|++| ..|++.|.++||+|.++..
T Consensus 9 ~~~vlVTGa-------tGfIG---~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 9 KKTACVVGG-------TGFVA---SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CCEEEEECT-------TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECC-------chHHH---HHHHHHHHHCCCEEEEEEc
Confidence 467765543 46666 5688889999999987654
No 206
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=36.37 E-value=29 Score=33.06 Aligned_cols=35 Identities=34% Similarity=0.441 Sum_probs=25.9
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
...|||.||+. |.+| ..|+..|++.||+|+++...
T Consensus 17 ~~~~kIgiIG~--------G~mG---~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 17 FQGMKIAVLGT--------GTVG---RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp --CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCeEEEECC--------CHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45799999973 4444 56788899999999887654
No 207
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=36.36 E-value=1.6e+02 Score=23.30 Aligned_cols=107 Identities=16% Similarity=0.135 Sum_probs=61.5
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--HhccEEEEcCCC-CCCcHHHHHHHHc-----CCceE
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY-----GTVPI 505 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~aDv~v~pS~~-E~~gl~~lEAma~-----G~PvI 505 (612)
+++|+.+.+ ...+.+..+-...+-.+. ...+.......+ ...|++++-... +.-|+.+++.+.. .+|+|
T Consensus 3 ~ilivdd~~-~~~~~l~~~L~~~~~~v~--~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii 79 (124)
T 1mb3_A 3 KVLIVEDNE-LNMKLFHDLLEAQGYETL--QTREGLSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVV 79 (124)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEE
T ss_pred EEEEEcCCH-HHHHHHHHHHHHcCcEEE--EeCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEE
Confidence 455665543 344455555444442232 223444443333 246888876554 3457777777753 56776
Q ss_pred EcCCCC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 506 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
.-.... ..+.++.|..+++. .|-+.+++...|.+++..
T Consensus 80 ~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 121 (124)
T 1mb3_A 80 AVTAFAMKGDEERIREGGCEAYIS----------KPISVVHFLETIKRLLER 121 (124)
T ss_dssp EEC------CHHHHHHHTCSEEEC----------SSCCHHHHHHHHHHHHSC
T ss_pred EEECCCCHHHHHHHHhCCCCEEEe----------CCCCHHHHHHHHHHHHhc
Confidence 543222 22334567788875 899999999999887753
No 208
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=36.22 E-value=18 Score=38.21 Aligned_cols=39 Identities=13% Similarity=0.192 Sum_probs=32.0
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhC--CCeEEEEEecC
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRY 128 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~--Gh~V~vit~~~ 128 (612)
+|+|+++. +| ..|--.=+..|++.|+++ ||+|+++++..
T Consensus 9 ~~~vv~~p---~p---~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~ 49 (463)
T 2acv_A 9 NSELIFIP---AP---GIGHLASALEFAKLLTNHDKNLYITVFCIKF 49 (463)
T ss_dssp CEEEEEEC---CS---STTTHHHHHHHHHHHHHTCTTEEEEEEECCC
T ss_pred CCEEEEEc---Cc---ccchHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 57998886 34 466667788999999999 99999998764
No 209
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=36.11 E-value=25 Score=33.47 Aligned_cols=25 Identities=32% Similarity=0.415 Sum_probs=20.2
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 23 sggiG---~~~a~~l~~~G~~V~~~~r~ 47 (265)
T 1h5q_A 23 NRGIG---LAFTRAVAAAGANVAVIYRS 47 (265)
T ss_dssp TSHHH---HHHHHHHHHTTEEEEEEESS
T ss_pred CchHH---HHHHHHHHHCCCeEEEEeCc
Confidence 57777 57889999999999888753
No 210
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=35.97 E-value=18 Score=35.61 Aligned_cols=34 Identities=35% Similarity=0.438 Sum_probs=24.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhC-----C-CeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-----G-HRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-----G-h~V~vit~ 126 (612)
.++|||+||+. |.+| ..++..|++. | |+|+++..
T Consensus 6 ~~~m~I~iiG~--------G~mG---~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 6 QQPIKIAVFGL--------GGVG---GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp -CCEEEEEECC--------SHHH---HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCCCEEEEECc--------CHHH---HHHHHHHHhCccccCCCCCEEEEEc
Confidence 34589999983 5555 3456777887 9 99998864
No 211
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=35.75 E-value=26 Score=35.65 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=25.2
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHH-hCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALA-ANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~-~~Gh~V~vit~~ 127 (612)
+|+|++.+. +|++| ..|++.|. ++||+|.++...
T Consensus 2 ~m~vlVTGa-------tG~iG---~~l~~~L~~~~g~~V~~~~r~ 36 (397)
T 1gy8_A 2 HMRVLVCGG-------AGYIG---SHFVRALLRDTNHSVVIVDSL 36 (397)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHHCCCEEEEEECC
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHhCCCEEEEEecC
Confidence 588776653 46666 56788899 999999988643
No 212
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=35.65 E-value=16 Score=37.24 Aligned_cols=33 Identities=21% Similarity=0.299 Sum_probs=24.7
Q ss_pred Cc-eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GL-NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~M-kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.| ||+||+. |.+| ..++..|++.||+|+++...
T Consensus 14 ~M~kI~iIG~--------G~mG---~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 14 YLNKAVVFGS--------GAFG---TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp CEEEEEEECC--------SHHH---HHHHHHHTTTEEEEEEECSC
T ss_pred ccCeEEEECC--------CHHH---HHHHHHHHhCCCEEEEEECC
Confidence 36 9999983 4444 45778889999999888644
No 213
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=35.53 E-value=1.5e+02 Score=22.91 Aligned_cols=105 Identities=12% Similarity=0.031 Sum_probs=59.4
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHH-----cCCceE
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-----YGTVPI 505 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma-----~G~PvI 505 (612)
+++++.+.. ...+.+.+.....+-.+.. .-+.+.....+. ..|++++-... +.-|..+++.+. ..+|+|
T Consensus 3 ~iliv~~~~-~~~~~l~~~l~~~g~~v~~--~~~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii 79 (119)
T 2j48_A 3 HILLLEEED-EAATVVCEMLTAAGFKVIW--LVDGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLV 79 (119)
T ss_dssp EEEEECCCH-HHHHHHHHHHHHTTCEEEE--ESCHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCE
T ss_pred EEEEEeCCH-HHHHHHHHHHHhCCcEEEE--ecCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEE
Confidence 566666543 3444455544444433332 223343333332 46888876554 345777788775 456776
Q ss_pred Ec-CCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHH
Q 007212 506 VA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 506 ~s-~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll 551 (612)
+- +.....+....|..+++. .|.+.+++.+.|.+++
T Consensus 80 ~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~l~~~~ 116 (119)
T 2j48_A 80 LFLGEPPVDPLLTAQASAILS----------KPLDPQLLLTTLQGLC 116 (119)
T ss_dssp EEESSCCSSHHHHHHCSEECS----------SCSTTHHHHHHHHTTC
T ss_pred EEeCCCCchhhhhcCHHHhcc----------CCCCHHHHHHHHHHHh
Confidence 43 322222445556677754 7889999998887654
No 214
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=35.48 E-value=48 Score=27.26 Aligned_cols=45 Identities=7% Similarity=-0.127 Sum_probs=33.0
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCCccc
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK 132 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~~~~ 132 (612)
|+.|||+.++.. .-+.+.++..+-+.+.++|.++.+.........
T Consensus 1 M~mkkIll~Cg~------G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~~~ 45 (106)
T 1e2b_A 1 MEKKHIYLFSSA------GMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAG 45 (106)
T ss_dssp CCCEEEEEECSS------STTTHHHHHHHHHHHHHSCCSEEEEEECSSSTT
T ss_pred CCCcEEEEECCC------chhHHHHHHHHHHHHHHCCCCeEEEEecHHHHH
Confidence 345789999965 234556777888888899999998887655433
No 215
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=35.30 E-value=26 Score=33.41 Aligned_cols=25 Identities=32% Similarity=0.437 Sum_probs=21.2
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|++| ..+|++++++|++|++++..
T Consensus 28 SG~mG---~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLG---KIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 56677 57899999999999999865
No 216
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=35.13 E-value=30 Score=32.53 Aligned_cols=35 Identities=23% Similarity=0.185 Sum_probs=25.0
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+|.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 6 ~~k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGG------RGALG---SRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETT------TSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECC------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 3455556532 57777 56888999999999887654
No 217
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=35.07 E-value=27 Score=32.49 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=24.3
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+ .|.+| ..++..|++.||+|.++...
T Consensus 28 ~~~I~iiG--------~G~~G---~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILG--------SGDFA---RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEEC--------CSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEc--------cCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 58999997 25555 45778899999999887654
No 218
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=35.04 E-value=22 Score=34.27 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=24.4
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++++. |.+| ..|+++|.++||+|.+++..
T Consensus 5 ~~~ilVtGa--------G~iG---~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFGH--------GYTA---RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEETC--------CHHH---HHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEECC--------cHHH---HHHHHHHHHCCCEEEEEEcC
Confidence 478877651 3344 56888899999999998755
No 219
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=34.97 E-value=40 Score=32.70 Aligned_cols=41 Identities=20% Similarity=0.362 Sum_probs=32.2
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++||++.|+.. .| .-|-.....+||..|++.|.+|.+|=..
T Consensus 80 ~~~kvI~vts~-kg---G~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 80 SAVQSIVITSE-AP---GAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCCEEEEECS-ST---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECC-CC---CCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46888888764 12 3467788999999999999999998654
No 220
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=34.95 E-value=22 Score=35.20 Aligned_cols=32 Identities=6% Similarity=0.050 Sum_probs=26.4
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|||++++. | ....+++++.++||+|.++.+.
T Consensus 2 ~m~Ililg~---------g---~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYAS---------H---SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESS---------T---THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECC---------h---hHHHHHHHHHhCCCEEEEEECC
Confidence 699999984 2 3457899999999999999876
No 221
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=34.88 E-value=38 Score=30.95 Aligned_cols=40 Identities=13% Similarity=0.061 Sum_probs=29.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHH-HHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPA-LAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~-L~~~Gh~V~vit~~ 127 (612)
|||++|... |. +.|-...+...+++. +.+.|++|.++-..
T Consensus 3 mkilii~gS--~r-~~g~t~~la~~i~~~~l~~~g~~v~~~dl~ 43 (197)
T 2vzf_A 3 YSIVAISGS--PS-RNSTTAKLAEYALAHVLARSDSQGRHIHVI 43 (197)
T ss_dssp EEEEEEECC--SS-TTCHHHHHHHHHHHHHHHHSSEEEEEEEGG
T ss_pred ceEEEEECC--CC-CCChHHHHHHHHHHHHHHHCCCeEEEEEcc
Confidence 799999864 42 345566677777888 88889999888753
No 222
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=34.67 E-value=1.8e+02 Score=23.39 Aligned_cols=107 Identities=11% Similarity=0.026 Sum_probs=62.4
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc-----CCce
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTVP 504 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~Pv 504 (612)
.+++|+.+.. .....+..+.. .+ ......-+...+...+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 5 ~~ilivdd~~-~~~~~l~~~l~-~~--~~v~~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pi 80 (133)
T 3nhm_A 5 PKVLIVENSW-TMRETLRLLLS-GE--FDCTTAADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPV 80 (133)
T ss_dssp CEEEEECSCH-HHHHHHHHHHT-TT--SEEEEESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCE
T ss_pred CEEEEEcCCH-HHHHHHHHHHh-CC--cEEEEECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCE
Confidence 4666666543 34444444433 22 22222234444433433 46888876554 4567777777764 6777
Q ss_pred EEcCC-C--CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 505 IVAST-G--GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~-g--g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|+-.. . ...+.+..|..+++. .|-+.++|.+.|.+++..
T Consensus 81 i~~s~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 81 IFVSGYAPRTEGPADQPVPDAYLV----------KPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp EEEESCCC-----TTSCCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCcHhHHHHhhcCCceEEe----------ccCCHHHHHHHHHHHHhh
Confidence 64432 1 123345566778876 899999999999999986
No 223
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=34.44 E-value=1.9e+02 Score=23.66 Aligned_cols=109 Identities=16% Similarity=0.122 Sum_probs=67.4
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH---hccEEEEcCCC-C-CCcHHHHHHHH--cCCce
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---GADFILIPSRF-E-PCGLIQLHAMR--YGTVP 504 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~---~aDv~v~pS~~-E-~~gl~~lEAma--~G~Pv 504 (612)
+.+++|+.+.. .....+.++....+-.+. ...+...+...+. ..|++++-... + .-|+.+++.+. ..+|+
T Consensus 5 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~i 81 (140)
T 3h5i_A 5 DKKILIVEDSK-FQAKTIANILNKYGYTVE--IALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPV 81 (140)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCE
T ss_pred CcEEEEEeCCH-HHHHHHHHHHHHcCCEEE--EecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCE
Confidence 35677776543 345555555555543232 3334555444553 36888887665 4 56777777665 46777
Q ss_pred EEcCC-C---CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 505 IVAST-G---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~-g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|+-.. . ...+.+..|..+++. .|.+.++|...|..+++.
T Consensus 82 i~ls~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~~ 124 (140)
T 3h5i_A 82 VFLTAHTEPAVVEKIRSVTAYGYVM----------KSATEQVLITIVEMALRL 124 (140)
T ss_dssp EEEESSSSCCCCGGGGGSCEEEEEE----------TTCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHhCCCcEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 65432 2 223445567788876 899999999999998875
No 224
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=34.36 E-value=27 Score=33.81 Aligned_cols=32 Identities=31% Similarity=0.411 Sum_probs=24.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 1 m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGC--------GALG---QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECc--------CHHH---HHHHHHHHhCCCCEEEEEcC
Confidence 78988873 4444 46778899999999988654
No 225
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=34.32 E-value=44 Score=29.00 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=25.7
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+|+|++++. |.+| ..+++.|.+.|++|+++...
T Consensus 18 ~~~~v~IiG~--------G~iG---~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGC--------GRLG---SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 4689998872 4444 45777889999999998765
No 226
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=34.19 E-value=23 Score=35.50 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=24.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCC-CeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G-h~V~vit~~ 127 (612)
+++|+|++++. +|++| ..|++.|.++| |+|.++...
T Consensus 44 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 44 IEGRMIIVTGG-------AGFIG---SNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp ----CEEEETT-------TSHHH---HHHHHHHHHTTCCCEEEEECC
T ss_pred CCCCEEEEECC-------CcHHH---HHHHHHHHHCCCcEEEEEecC
Confidence 44688877654 46666 56888899999 999888654
No 227
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=34.13 E-value=1.7e+02 Score=29.38 Aligned_cols=105 Identities=14% Similarity=0.153 Sum_probs=66.9
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHH-hCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCC
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE-VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKEN 432 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~ 432 (612)
|.||.+ +.+.|... -.+--.+++. +|-.- +...|.|+|-. ...=...++.++..+ +
T Consensus 124 VINa~~-~~~HPtQ~----------------LaDl~Ti~e~~~g~~l--~gl~ia~vGD~-~~~va~Sl~~~~~~~---G 180 (333)
T 1duv_G 124 VWNGLT-NEFHPTQL----------------LADLLTMQEHLPGKAF--NEMTLVYAGDA-RNNMGNSMLEAAALT---G 180 (333)
T ss_dssp EEESCC-SSCCHHHH----------------HHHHHHHHHHSTTCCG--GGCEEEEESCT-TSHHHHHHHHHHHHH---C
T ss_pred eEcCCC-CCCCchHH----------------HHHHHHHHHHhcCCCC--CCcEEEEECCC-ccchHHHHHHHHHHc---C
Confidence 446776 67777532 1223445666 66111 23689999986 345567888888887 7
Q ss_pred eEEEEEecCC----hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCC
Q 007212 433 VQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 433 ~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
+++.+++... +.+.+.+++.+.+.+.++.... + +.+.+..||++.....
T Consensus 181 ~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~~--d---~~eav~~aDvvytd~w 233 (333)
T 1duv_G 181 LDLRLVAPQACWPEAALVTECRALAQQNGGNITLTE--D---VAKGVEGADFIYTDVW 233 (333)
T ss_dssp CEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEES--C---HHHHHTTCSEEEECCS
T ss_pred CEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEE--C---HHHHhCCCCEEEeCCc
Confidence 8999999743 3355556667667665444331 2 2346899999887665
No 228
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=33.94 E-value=41 Score=30.37 Aligned_cols=38 Identities=11% Similarity=0.136 Sum_probs=31.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHh-CCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~-~Gh~V~vit~~ 127 (612)
|||++|... | +|-...+...+++.+.+ .|++|.++...
T Consensus 2 mkilii~~S--~---~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 2 AKVLVLYYS--M---YGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp CEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CeEEEEEeC--C---CcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 799999764 4 57788888889999988 89999988754
No 229
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=33.88 E-value=1.6e+02 Score=29.91 Aligned_cols=104 Identities=13% Similarity=0.139 Sum_probs=66.9
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCe
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 433 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~ 433 (612)
|.||.+ +.+.|... -.+--.+++.+|-- +...|.|+|-. ...=...++.++..+ ++
T Consensus 147 VINa~~-~~~HPtQa----------------LaDl~Ti~E~~g~l---~gl~va~vGD~-~~rva~Sl~~~~~~l---G~ 202 (359)
T 2w37_A 147 VWNGLT-DEWHPTQM----------------LADFMTVKENFGKL---QGLTLTFMGDG-RNNVANSLLVTGAIL---GV 202 (359)
T ss_dssp EEEEEC-SSCCHHHH----------------HHHHHHHHHHHSCC---TTCEEEEESCT-TSHHHHHHHHHHHHH---TC
T ss_pred EEcCCC-CCCCccHH----------------HHHHHHHHHHhCCc---CCeEEEEECCC-ccchHHHHHHHHHHc---CC
Confidence 456776 67777532 12234566677632 23689999987 345567888888887 78
Q ss_pred EEEEEecCC----hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCC
Q 007212 434 QIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 434 ~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
++.+++... +.+.+.+++.+.+.+.++.... + +.+.+..||++.....
T Consensus 203 ~v~~~~P~~l~p~~~~~~~~~~~a~~~G~~v~~~~--d---~~eav~~aDvvytd~w 254 (359)
T 2w37_A 203 NIHIVAPKALFPTEETQNIAKGFAEKSGAKLVITD--D---LDEGLKGSNVVYTDVW 254 (359)
T ss_dssp EEEEECCGGGSCCHHHHHHHHHHHHHHTCCEEEES--C---HHHHHTTCSEEEECCS
T ss_pred EEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEe--C---HHHHhcCCCEEEEccc
Confidence 999999743 2344556666666665454331 2 2346899999887654
No 230
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=33.84 E-value=35 Score=32.70 Aligned_cols=24 Identities=21% Similarity=0.387 Sum_probs=19.5
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++|++|.++..
T Consensus 25 sggiG---~~~a~~l~~~G~~V~~~~r 48 (278)
T 2bgk_A 25 AGGIG---ETTAKLFVRYGAKVVIADI 48 (278)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEcC
Confidence 57777 5788899999999988754
No 231
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=33.80 E-value=28 Score=34.63 Aligned_cols=36 Identities=31% Similarity=0.503 Sum_probs=24.5
Q ss_pred ccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.....|||++|+. |.+| ..++..|++.||+|+++ .+
T Consensus 15 ~~~~~~kI~IiGa--------Ga~G---~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 15 LYFQGMKVAIMGA--------GAVG---CYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp -----CEEEEESC--------SHHH---HHHHHHHHHTTCEEEEE-CC
T ss_pred hhccCCcEEEECc--------CHHH---HHHHHHHHHCCCeEEEE-Ec
Confidence 3445799999983 5555 35677789999999998 54
No 232
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=33.60 E-value=2.1e+02 Score=23.86 Aligned_cols=108 Identities=16% Similarity=0.177 Sum_probs=63.8
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHH---cCCceEE
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPIV 506 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI~ 506 (612)
.+++|+.+.+ .....+.......+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|+
T Consensus 4 ~~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~ 80 (155)
T 1qkk_A 4 PSVFLIDDDR-DLRKAMQQTLELAGFTVS--SFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMIL 80 (155)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEE
T ss_pred CEEEEEeCCH-HHHHHHHHHHHHcCcEEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEE
Confidence 4566666543 344455555444442232 2224444433332 46888876554 345666666664 3677765
Q ss_pred cC-CCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 507 AS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
-. ... ..+.+..|..+++. .|.+.+++...|..++..
T Consensus 81 ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 81 VTGHGDIPMAVQAIQDGAYDFIA----------KPFAADRLVQSARRAEEK 121 (155)
T ss_dssp EECGGGHHHHHHHHHTTCCEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHhcCCCeEEe----------CCCCHHHHHHHHHHHHHH
Confidence 43 222 23344567788876 889999999999998875
No 233
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=33.53 E-value=25 Score=35.70 Aligned_cols=34 Identities=26% Similarity=0.402 Sum_probs=25.4
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCC-CeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G-h~V~vit~~ 127 (612)
+|+|++++. +|++| ..|++.|.++| |+|.++...
T Consensus 32 ~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 32 NTNVMVVGG-------AGFVG---SNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp TCEEEEETT-------TSHHH---HHHHHHHHHTTCSEEEEECCC
T ss_pred CCEEEEECC-------ccHHH---HHHHHHHHHcCCceEEEEECC
Confidence 577776654 46666 56888899999 999988644
No 234
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=33.53 E-value=2e+02 Score=23.53 Aligned_cols=109 Identities=9% Similarity=0.088 Sum_probs=66.2
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCC--ceEEEeccChHHHHHHHH------------hccEEEEcCCC-CCCcHHHHH
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPE--KARGVAKFNIPLAHMIIA------------GADFILIPSRF-EPCGLIQLH 496 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~--~v~~~~~~~~~~~~~i~~------------~aDv~v~pS~~-E~~gl~~lE 496 (612)
..+++|+.+.. .....+.++-...+. .+. ..-+...+...+. ..|++++-... +.-|+.+++
T Consensus 6 ~~~iLivdd~~-~~~~~l~~~L~~~g~~~~v~--~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~ 82 (149)
T 1k66_A 6 TQPLLVVEDSD-EDFSTFQRLLQREGVVNPIY--RCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQ 82 (149)
T ss_dssp TSCEEEECCCH-HHHHHHHHHHHHTTBCSCEE--EECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHH
T ss_pred CccEEEEECCH-HHHHHHHHHHHHcCCCceEE--EECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHH
Confidence 45666776543 344555555555442 232 2224444444444 46888876655 346777888
Q ss_pred HHH-----cCCceEEcC-CCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 497 AMR-----YGTVPIVAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 497 Ama-----~G~PvI~s~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
.+. ..+|+|+-. ... ..+.++.|..+++. .|.+.++|.+.|.+++..
T Consensus 83 ~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 138 (149)
T 1k66_A 83 EIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIV----------KPLEIDRLTETVQTFIKY 138 (149)
T ss_dssp HHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHHH
T ss_pred HHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 775 356766443 222 22344567788876 889999999999988764
No 235
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=33.53 E-value=22 Score=34.01 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=25.1
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
..|||.||+.- - .| ..|+..|.++||+|..+..
T Consensus 5 ~~mkI~IIG~G--~---~G------~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDG--S---ST------VNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCS--C---CC------SCHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeC--H---HH------HHHHHHHHHCCCEEEEecC
Confidence 46999999852 1 23 4789999999999987754
No 236
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=33.51 E-value=1.9e+02 Score=23.29 Aligned_cols=109 Identities=14% Similarity=0.200 Sum_probs=64.8
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH-H--hccEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII-A--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 503 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~-~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 503 (612)
.+++|+.+.. ...+.++.+-.+.+-... ....+.......+ . ..|++++-... +.-|+.+++.+.. .+|
T Consensus 6 ~~iLivdd~~-~~~~~l~~~L~~~g~~~v-~~~~~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~p 83 (129)
T 3h1g_A 6 MKLLVVDDSS-TMRRIIKNTLSRLGYEDV-LEAEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIP 83 (129)
T ss_dssp CCEEEECSCH-HHHHHHHHHHHHTTCCCE-EEESSHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCC
T ss_pred cEEEEEeCCH-HHHHHHHHHHHHcCCcEE-EEeCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCe
Confidence 4566766543 445555555555542211 1222333333333 2 46888875544 4467888888764 567
Q ss_pred eEEcC-CCCc---ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 504 PIVAS-TGGL---VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~-~gg~---~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+|+-. .... .+.++.|..+|+. .|-+.++|.+.|+.++..
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 84 IIMITAEGGKAEVITALKAGVNNYIV----------KPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp EEEEESCCSHHHHHHHHHHTCCEEEE----------SCCCHHHHHHHHHHHHCC
T ss_pred EEEEeCCCChHHHHHHHHcCccEEEe----------CCCCHHHHHHHHHHHhcc
Confidence 76543 3322 2344567888976 899999999999988753
No 237
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=33.45 E-value=31 Score=34.00 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=25.3
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+.|||.||+. |-+| ..++..|++.||+|+++...
T Consensus 6 ~~~~I~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr~ 39 (303)
T 3g0o_A 6 TDFHVGIVGL--------GSMG---MGAARSCLRAGLSTWGADLN 39 (303)
T ss_dssp -CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCCeEEEECC--------CHHH---HHHHHHHHHCCCeEEEEECC
Confidence 4689999973 4444 46788899999999888543
No 238
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=33.35 E-value=21 Score=34.10 Aligned_cols=34 Identities=21% Similarity=0.140 Sum_probs=24.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 1 Mk~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 34 (254)
T 1zmt_A 1 MSTAIVTNV------KHFGG---MGSALRLSEAGHTVACHDES 34 (254)
T ss_dssp -CEEEESST------TSTTH---HHHHHHHHHTTCEEEECCGG
T ss_pred CeEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777743 57777 56888999999998776543
No 239
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=33.34 E-value=19 Score=34.62 Aligned_cols=35 Identities=20% Similarity=0.196 Sum_probs=25.2
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||.++|+.- +||+| ..|++.|+++||+|.++...
T Consensus 2 ~~k~vlVTGa------sg~IG---~~la~~L~~~G~~V~~~~r~ 36 (267)
T 3rft_A 2 AMKRLLVTGA------AGQLG---RVMRERLAPMAEILRLADLS 36 (267)
T ss_dssp CEEEEEEEST------TSHHH---HHHHHHTGGGEEEEEEEESS
T ss_pred CCCEEEEECC------CCHHH---HHHHHHHHhcCCEEEEEecC
Confidence 3666666632 57877 46788899999999877644
No 240
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=33.27 E-value=2e+02 Score=23.50 Aligned_cols=109 Identities=13% Similarity=0.144 Sum_probs=63.5
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCCC-CCcHHHHHHHHc--CCceEE
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFE-PCGLIQLHAMRY--GTVPIV 506 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~E-~~gl~~lEAma~--G~PvI~ 506 (612)
..+++|+.+.+ ...+.+..+....+-.+ ...-+....-..+. ..|++++-.... .-|+.+++.+.. .+|+|.
T Consensus 4 ~~~Ilivdd~~-~~~~~l~~~L~~~g~~v--~~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ 80 (136)
T 2qzj_A 4 QTKILIIDGDK-DNCQKLKGFLEEKGISI--DLAYNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVY 80 (136)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHTTTCEE--EEESSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEE
T ss_pred CCeEEEEcCCH-HHHHHHHHHHHHCCCEE--EEECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEE
Confidence 35667776544 34444555444433222 22224444433433 458888755443 356777777653 567664
Q ss_pred c-CCCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 507 A-STGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s-~~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
- .... ..+.++.|..+++. .|.+.++|...|..++..
T Consensus 81 ls~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~l~~~~~~ 121 (136)
T 2qzj_A 81 MTYINEDQSILNALNSGGDDYLI----------KPLNLEILYAKVKAILRR 121 (136)
T ss_dssp EESCCCHHHHHHHHHTTCCEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHHH
Confidence 3 3322 23345567888876 899999999999888764
No 241
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=33.19 E-value=2.2e+02 Score=28.62 Aligned_cols=86 Identities=13% Similarity=0.080 Sum_probs=57.0
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC----hhHHHHHHHHHHHCCCceEEE
Q 007212 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 388 ~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~ 463 (612)
--.+++.+|-- +...|.|+|-+ ..=...++.++..+ ++++.+++... +.+.+.+++.+.+.+.++...
T Consensus 167 l~TI~E~~G~l---~glkva~vGD~--~nva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~ 238 (340)
T 4ep1_A 167 LMTIYEETNTF---KGIKLAYVGDG--NNVCHSLLLASAKV---GMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEIL 238 (340)
T ss_dssp HHHHHHHHSCC---TTCEEEEESCC--CHHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHhCCC---CCCEEEEECCC--chhHHHHHHHHHHc---CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 34567777743 23689999987 33467788888887 78999999743 345555666666666545432
Q ss_pred eccChHHHHHHHHhccEEEEcCC
Q 007212 464 AKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 464 ~~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
. + +.+.+..||++.....
T Consensus 239 ~--d---~~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 239 H--N---PELAVNEADFIYTDVW 256 (340)
T ss_dssp S--C---HHHHHTTCSEEEECCC
T ss_pred C--C---HHHHhCCCCEEEecCc
Confidence 2 2 2346899999887654
No 242
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=33.17 E-value=1.1e+02 Score=29.16 Aligned_cols=78 Identities=13% Similarity=0.099 Sum_probs=45.6
Q ss_pred EEEEEec-CChhHHHHHHHHHHHCC-CceEEEeccChHHHHHHHH-hccEEEEcCCCCCCcHHHHHHHHcCCceEEcCCC
Q 007212 434 QIIVLGT-GKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 510 (612)
Q Consensus 434 ~lvivG~-g~~~~~~~l~~l~~~~~-~~v~~~~~~~~~~~~~i~~-~aDv~v~pS~~E~~gl~~lEAma~G~PvI~s~~g 510 (612)
++.|+|. |. +-+.+.+...+.+ -.+........+ +..++. .+|++|--+.-+..--.+..|...|+|+|+..+|
T Consensus 2 kV~V~Ga~G~--mG~~i~~~~~~~~~~elva~~d~~~d-l~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 2 RVGVLGAKGK--VGTTMVRAVAAADDLTLSAELDAGDP-LSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG 78 (245)
T ss_dssp EEEEETTTSH--HHHHHHHHHHHCTTCEEEEEECTTCC-THHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred EEEEECCCCH--HHHHHHHHHHhCCCCEEEEEEccCCC-HHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence 6788884 76 5555555554443 233333322221 223444 7999995555455444455678999999998776
Q ss_pred Cccc
Q 007212 511 GLVD 514 (612)
Q Consensus 511 g~~e 514 (612)
...|
T Consensus 79 ~~~e 82 (245)
T 1p9l_A 79 FTAE 82 (245)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 5444
No 243
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=33.16 E-value=34 Score=33.16 Aligned_cols=37 Identities=27% Similarity=0.257 Sum_probs=25.0
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|...|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 21 m~~~k~~lVTGa------s~GIG---~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGV------SSGIG---LAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEEST------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 334577777743 57777 56888999999999777643
No 244
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=32.51 E-value=43 Score=32.01 Aligned_cols=42 Identities=19% Similarity=0.087 Sum_probs=28.5
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCC
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~ 129 (612)
|++++|++|++- |+.- ...++.....++++|++|.+++-..+
T Consensus 1 ~~~~~vL~v~aH--PDDe----~l~~Ggtia~~~~~G~~V~vv~lT~G 42 (242)
T 2ixd_A 1 MSGLHILAFGAH--ADDV----EIGMAGTIAKYTKQGYEVGICDLTEA 42 (242)
T ss_dssp -CCCSEEEEESS--TTHH----HHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred CCCccEEEEEeC--CChH----HHhHHHHHHHHHHCCCeEEEEEEcCC
Confidence 467899999985 6532 23334555667889999999986533
No 245
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=32.50 E-value=3.8e+02 Score=26.61 Aligned_cols=127 Identities=15% Similarity=0.108 Sum_probs=76.1
Q ss_pred HhhCCEEEe--cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 315 ILESDMVLT--VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 315 l~~ad~vi~--vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
-..+|.|+. .+....+++.+. ..+.|| ||-+ +...|... -.+--.++
T Consensus 99 s~~~D~iviR~~~~~~~~~lA~~-------------~~vPVI-Na~~-~~~HPtQa----------------LaDl~Ti~ 147 (321)
T 1oth_A 99 SSMADAVLARVYKQSDLDTLAKE-------------ASIPII-NGLS-DLYHPIQI----------------LADYLTLQ 147 (321)
T ss_dssp HHHCSEEEEECSCHHHHHHHHHH-------------CSSCEE-ESCC-SSCCHHHH----------------HHHHHHHH
T ss_pred HHhCCEEEEeCCChhHHHHHHHh-------------CCCCEE-cCCC-CCCCcHHH----------------HHHHHHHH
Confidence 345798877 455666666541 144444 6666 66777531 12334566
Q ss_pred HHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC----hhHHHHHHHHHHHCCCceEEEeccCh
Q 007212 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 393 ~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~~ 468 (612)
+.+|-- +...|.|+|-.. .=...++.++..+ ++++.+++... +.+.+.+++.+.+.+..+.... +
T Consensus 148 e~~g~l---~gl~va~vGD~~--~va~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~~--d- 216 (321)
T 1oth_A 148 EHYSSL---KGLTLSWIGDGN--NILHSIMMSAAKF---GMHLQAATPKGYEPDASVTKLAEQYAKENGTKLLLTN--D- 216 (321)
T ss_dssp HHHSCC---TTCEEEEESCSS--HHHHHHHTTTGGG---TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES--C-
T ss_pred HHhCCc---CCcEEEEECCch--hhHHHHHHHHHHc---CCeEEEECCccccCCHHHHHHHHHHHHHcCCeEEEEE--C-
Confidence 677632 236899999863 2345566666665 78999999743 3444556666666554454331 2
Q ss_pred HHHHHHHHhccEEEEcC
Q 007212 469 PLAHMIIAGADFILIPS 485 (612)
Q Consensus 469 ~~~~~i~~~aDv~v~pS 485 (612)
+.+.+..||++..-.
T Consensus 217 --~~eav~~aDvvy~d~ 231 (321)
T 1oth_A 217 --PLEAAHGGNVLITDT 231 (321)
T ss_dssp --HHHHHTTCSEEEECC
T ss_pred --HHHHhccCCEEEEec
Confidence 234689999988744
No 246
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=32.49 E-value=41 Score=32.71 Aligned_cols=36 Identities=22% Similarity=0.364 Sum_probs=25.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++++|++.+. .||+| ..+++.|+++|++|.++...
T Consensus 24 l~~k~vlITGa-------sggiG---~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 24 FQGKVAFITGG-------GTGLG---KGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TTTCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECC-------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34555555443 57777 57888999999999887644
No 247
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=32.30 E-value=28 Score=32.47 Aligned_cols=25 Identities=32% Similarity=0.413 Sum_probs=19.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 14 sggiG---~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 14 SRGIG---EATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 46776 57888999999999887643
No 248
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=32.27 E-value=36 Score=32.74 Aligned_cols=34 Identities=26% Similarity=0.380 Sum_probs=24.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 21 ~k~~lVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 21 GRVALVTGG------SRGLG---FGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp TCEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 355566532 57777 57888999999999887644
No 249
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=31.97 E-value=1.8e+02 Score=23.78 Aligned_cols=109 Identities=15% Similarity=0.139 Sum_probs=66.2
Q ss_pred CeEEEEEecCChhHHHHHHHHHHH-CCCceEEEeccChHHHHHHHHh---ccEEEEcCCCC-C-CcHHHHHHHHc-----
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEIL-YPEKARGVAKFNIPLAHMIIAG---ADFILIPSRFE-P-CGLIQLHAMRY----- 500 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~-~~~~v~~~~~~~~~~~~~i~~~---aDv~v~pS~~E-~-~gl~~lEAma~----- 500 (612)
..+++|+.+.. .....++.+... .+-.+ ...-+...+...+.. .|++++-.... + -|+.+++.+..
T Consensus 4 ~~~ilivdd~~-~~~~~l~~~L~~~~~~~v--~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ 80 (140)
T 3lua_A 4 DGTVLLIDYFE-YEREKTKIIFDNIGEYDF--IEVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTA 80 (140)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHHCCCEE--EEECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGT
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhccCccE--EEECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccC
Confidence 34667776543 344555555555 44223 233345554444444 68888766543 2 46667766654
Q ss_pred CCceEEcCCCC----cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 501 GTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 501 G~PvI~s~~gg----~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
.+|+|+-.... ..+.+..|..+++. .|-+.++|.++|..++..
T Consensus 81 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 127 (140)
T 3lua_A 81 NTPVIIATKSDNPGYRHAALKFKVSDYIL----------KPYPTKRLENSVRSVLKI 127 (140)
T ss_dssp TCCEEEEESCCCHHHHHHHHHSCCSEEEE----------SSCCTTHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHcCCCEEEE----------CCCCHHHHHHHHHHHHHh
Confidence 67776543322 22344567888876 889999999999998875
No 250
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=31.74 E-value=2.2e+02 Score=23.59 Aligned_cols=110 Identities=9% Similarity=0.072 Sum_probs=65.2
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH---------hccEEEEcCCC-CCCcHHHHHHHHc-
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---------GADFILIPSRF-EPCGLIQLHAMRY- 500 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~---------~aDv~v~pS~~-E~~gl~~lEAma~- 500 (612)
..+++|+.+.+ .....++......+........-+...+-..+. ..|++++-... +.-|+.+++.+..
T Consensus 8 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~~ 86 (149)
T 1i3c_A 8 PKVILLVEDSK-ADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQN 86 (149)
T ss_dssp CEEEEEECCCH-HHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHC
T ss_pred CCeEEEEECCH-HHHHHHHHHHHhcCCCccEEEeCCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHhC
Confidence 46677776543 445555555544432112222224444444554 46888876654 3357777777753
Q ss_pred ----CCceEEc-CCCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 501 ----GTVPIVA-STGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 501 ----G~PvI~s-~~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
.+|+|+- .... ..+.++.|..+++. .|.+.++|.+.|+.++.
T Consensus 87 ~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~~~ 136 (149)
T 1i3c_A 87 PDLKRIPVVVLTTSHNEDDVIASYELHVNCYLT----------KSRNLKDLFKMVQGIES 136 (149)
T ss_dssp TTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHH
T ss_pred cCcCCCeEEEEECCCChHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHH
Confidence 4676543 3322 23344567888976 88999999999988765
No 251
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=31.73 E-value=37 Score=32.70 Aligned_cols=35 Identities=23% Similarity=0.508 Sum_probs=25.7
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 3 ~~k~~lVTGa------s~GIG---~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 3 MDKVILITGA------SGGIG---EGIARELGVAGAKILLGARR 37 (264)
T ss_dssp TTCEEEESST------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEeCC------ccHHH---HHHHHHHHHCCCEEEEEECC
Confidence 3466667643 57777 57889999999999877644
No 252
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=31.67 E-value=40 Score=31.86 Aligned_cols=25 Identities=20% Similarity=0.337 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 14 s~giG---~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 14 AHGIG---RATLELFAKEGARLVACDIE 38 (245)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888899999999887644
No 253
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=31.66 E-value=46 Score=31.90 Aligned_cols=42 Identities=17% Similarity=0.004 Sum_probs=29.4
Q ss_pred CCCceEEEEEecccCccccccH-HHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGL-GDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~-~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+..|||++|... |. .+|. ...+..+++.+.+.|++|.++-..
T Consensus 32 ~~~mkIliI~GS--~r--~~s~t~~La~~~~~~l~~~g~eve~idL~ 74 (247)
T 2q62_A 32 THRPRILILYGS--LR--TVSYSRLLAEEARRLLEFFGAEVKVFDPS 74 (247)
T ss_dssp CSCCEEEEEECC--CC--SSCHHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CCCCeEEEEEcc--CC--CCCHHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 346899999975 53 3444 455556777788889999888643
No 254
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=31.66 E-value=30 Score=32.47 Aligned_cols=25 Identities=20% Similarity=0.315 Sum_probs=19.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 14 sggiG---~~~a~~l~~~G~~V~~~~~r 38 (247)
T 2hq1_A 14 SRGLG---KAIAWKLGNMGANIVLNGSP 38 (247)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcCc
Confidence 57777 57888999999999887543
No 255
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=31.60 E-value=91 Score=31.30 Aligned_cols=43 Identities=21% Similarity=0.261 Sum_probs=32.4
Q ss_pred HHHHHhccEEEEc--CCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007212 472 HMIIAGADFILIP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 472 ~~i~~~aDv~v~p--S~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
.++++.||++++- ..-|+ ++-..+..|--|.-+|-+.-|++.+
T Consensus 189 ~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVd 236 (334)
T 3kb6_A 189 DELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVD 236 (334)
T ss_dssp HHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred HHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCcccccc
Confidence 4689999998763 34455 4556899998898888888887665
No 256
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=31.58 E-value=20 Score=35.08 Aligned_cols=34 Identities=26% Similarity=0.397 Sum_probs=25.0
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhC--CCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~--Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..|++.|.++ ||+|.++...
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~~~g~~V~~~~r~ 37 (312)
T 2yy7_A 2 NPKILIIGA-------CGQIG---TELTQKLRKLYGTENVIASDIR 37 (312)
T ss_dssp CCCEEEETT-------TSHHH---HHHHHHHHHHHCGGGEEEEESC
T ss_pred CceEEEECC-------ccHHH---HHHHHHHHHhCCCCEEEEEcCC
Confidence 578776653 46666 5678888888 9999988744
No 257
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=31.51 E-value=35 Score=32.62 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=25.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 3 ~~k~vlVTGa------s~gIG---~aia~~l~~~G~~vv~~~~r 37 (258)
T 3oid_A 3 QNKCALVTGS------SRGVG---KAAAIRLAENGYNIVINYAR 37 (258)
T ss_dssp CCCEEEESSC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEecC------CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 4466667642 57777 56889999999999886443
No 258
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=31.51 E-value=33 Score=36.19 Aligned_cols=33 Identities=30% Similarity=0.337 Sum_probs=24.9
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |-+| ..++..|++.||+|+++-..
T Consensus 2 ~mkI~VIG~--------G~vG---~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 2 SLDIAVVGI--------GYVG---LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECc--------CHHH---HHHHHHHHhcCCEEEEEECC
Confidence 489999984 3233 45788899999999988654
No 259
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=31.48 E-value=27 Score=33.73 Aligned_cols=33 Identities=27% Similarity=0.346 Sum_probs=24.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC-CCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~ 127 (612)
|||++++. +|++| ..+++.|.+. ||+|.+++.+
T Consensus 1 M~ilVtGa-------tG~iG---~~l~~~L~~~~g~~V~~~~R~ 34 (289)
T 3e48_A 1 MNIMLTGA-------TGHLG---THITNQAIANHIDHFHIGVRN 34 (289)
T ss_dssp CCEEEETT-------TSHHH---HHHHHHHHHTTCTTEEEEESS
T ss_pred CEEEEEcC-------CchHH---HHHHHHHhhCCCCcEEEEECC
Confidence 77777664 46676 4566668888 9999998765
No 260
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=31.32 E-value=49 Score=32.42 Aligned_cols=39 Identities=23% Similarity=0.251 Sum_probs=30.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|||+.|+ . -+ .-|-.+.+.+||.+|+++|++|.+|=..
T Consensus 40 ~~~vI~v~-~-KG---GvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 40 GAKVFAVY-G-KG---GIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp CCEEEEEE-C-ST---TSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CceEEEEE-C-CC---CccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 57777776 3 22 4567788899999999999999999655
No 261
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=31.23 E-value=36 Score=32.30 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=24.9
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHh-CCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~-~Gh~V~vit~~ 127 (612)
.+|.++|+.- .||+| ..+++.|++ +|++|.++...
T Consensus 3 ~~k~vlITGa------sggIG---~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTGG------NKGIG---LAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCCEEEESSC------SSHHH---HHHHHHHHHHSSSEEEEEESS
T ss_pred CCCEEEEeCC------CcHHH---HHHHHHHHHhcCCeEEEEeCC
Confidence 4555566532 57777 568888999 99999887644
No 262
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=31.03 E-value=2.3e+02 Score=23.56 Aligned_cols=109 Identities=17% Similarity=0.258 Sum_probs=61.7
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHH---cCCceE
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI 505 (612)
..+++|+.+.. .....+..+....+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 14 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii 90 (153)
T 3hv2_A 14 RPEILLVDSQE-VILQRLQQLLSPLPYTLH--FARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRI 90 (153)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHTTSSCEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEE
T ss_pred CceEEEECCCH-HHHHHHHHHhcccCcEEE--EECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEE
Confidence 34566665433 334444444444332222 2223333333333 35788776554 445777776664 367776
Q ss_pred EcCCCC----cccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 506 VASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+-.... ..+.+..| ..+++. .|-+.++|..+|..++..
T Consensus 91 ~~s~~~~~~~~~~~~~~g~~~~~l~----------KP~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 91 LLTGDPDLKLIAKAINEGEIYRYLS----------KPWDDQELLLALRQALEH 133 (153)
T ss_dssp EECCCCCHHHHHHHHHTTCCSEEEC----------SSCCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHhCCCcceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 544322 22344556 678865 899999999999998875
No 263
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=30.88 E-value=1.8e+02 Score=26.99 Aligned_cols=34 Identities=15% Similarity=0.169 Sum_probs=22.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCC--eEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh--~V~vit~~ 127 (612)
|||+|+.+. + +.....+.+++.+.+| +|..+..+
T Consensus 2 ~rI~vl~SG------~---g~~~~~~l~~l~~~~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 2 LKIGVLVSG------R---GSNLQAIIDAIESGKVNASIELVISD 37 (216)
T ss_dssp EEEEEEECS------C---CHHHHHHHHHHHTTSSCEEEEEEEES
T ss_pred CEEEEEEeC------C---cHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 699988642 1 2356778888888888 66544443
No 264
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=30.88 E-value=49 Score=31.23 Aligned_cols=39 Identities=18% Similarity=0.227 Sum_probs=29.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+.|+.. ...-|-.+.+.+|+.+|+++|++|.++=..
T Consensus 2 ~~vi~v~s~----kgGvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 2 ARIIVVTSG----KGGVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp CEEEEEECS----STTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECC----CCCCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 566666643 113466788899999999999999998655
No 265
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=30.83 E-value=2e+02 Score=26.82 Aligned_cols=39 Identities=18% Similarity=0.277 Sum_probs=22.9
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHh-CCCeEEEEEecCC
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPRYD 129 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~-~Gh~V~vit~~~~ 129 (612)
+++|||+++.+. . +..+..|..++.+ .+++|..+..+.+
T Consensus 10 ~~~~ri~vl~SG------~---gsnl~all~~~~~~~~~eI~~Vis~~~ 49 (215)
T 3da8_A 10 SAPARLVVLASG------T---GSLLRSLLDAAVGDYPARVVAVGVDRE 49 (215)
T ss_dssp CSSEEEEEEESS------C---CHHHHHHHHHSSTTCSEEEEEEEESSC
T ss_pred CCCcEEEEEEeC------C---hHHHHHHHHHHhccCCCeEEEEEeCCc
Confidence 456899988742 1 3345566665543 3457776666533
No 266
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=30.82 E-value=29 Score=32.40 Aligned_cols=25 Identities=40% Similarity=0.563 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++|++|.++...
T Consensus 11 sggiG---~~la~~l~~~G~~V~~~~r~ 35 (242)
T 1uay_A 11 ASGLG---RAAALALKARGYRVVVLDLR 35 (242)
T ss_dssp TSHHH---HHHHHHHHHHTCEEEEEESS
T ss_pred CChHH---HHHHHHHHHCCCEEEEEccC
Confidence 47777 57888999999999887644
No 267
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=30.79 E-value=2.2e+02 Score=23.19 Aligned_cols=111 Identities=7% Similarity=0.011 Sum_probs=66.9
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh-------ccEEEEcCCC-CCCcHHHHHHHHc---
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG-------ADFILIPSRF-EPCGLIQLHAMRY--- 500 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~-------aDv~v~pS~~-E~~gl~~lEAma~--- 500 (612)
..+++|+.+.. .....+..+....+........-+...+...+.. .|++++-... +.-|+.+++.+..
T Consensus 9 ~~~iLivdd~~-~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~ 87 (146)
T 3ilh_A 9 IDSVLLIDDDD-IVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQ 87 (146)
T ss_dssp EEEEEEECSCH-HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCG
T ss_pred cceEEEEeCCH-HHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhh
Confidence 35667776543 4455566655554431122222345555455544 7888887665 4567777777654
Q ss_pred ----CCceEEcCCCC----cccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 501 ----GTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 501 ----G~PvI~s~~gg----~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
.+|+|+-.... ..+....| ..+++. .|-+.++|.++|.+....
T Consensus 88 ~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~----------KP~~~~~L~~~i~~~~~~ 139 (146)
T 3ilh_A 88 PMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVS----------KPLTANALNNLYNKVLNE 139 (146)
T ss_dssp GGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEEC----------SSCCHHHHHHHHHHHHCC
T ss_pred hccCCCeEEEEeCCCChHHHHHHHhcCCcceeee----------CCCCHHHHHHHHHHHHHh
Confidence 56665544322 22334455 777865 899999999999988775
No 268
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=30.56 E-value=67 Score=28.24 Aligned_cols=39 Identities=10% Similarity=-0.001 Sum_probs=32.1
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..||++|... + +|....+...+++.|.+.|++|.++...
T Consensus 4 ~~kv~IvY~S--~---~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 4 ETSIGVFYVS--E---YGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CCEEEEEECT--T---STTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEEEC--C---ChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 4678888642 4 7999999999999999999999888654
No 269
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=30.52 E-value=39 Score=31.25 Aligned_cols=32 Identities=13% Similarity=0.205 Sum_probs=24.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++. |.+-..+++.|.++||+|+++...
T Consensus 1 M~iiIiG~-----------G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGG-----------ETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECC-----------HHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC-----------CHHHHHHHHHHHhCCCeEEEEECC
Confidence 77777762 344567889999999999999865
No 270
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=30.51 E-value=2.5e+02 Score=23.73 Aligned_cols=111 Identities=13% Similarity=0.185 Sum_probs=69.4
Q ss_pred cCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHH-----cC
Q 007212 430 KENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-----YG 501 (612)
Q Consensus 430 ~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma-----~G 501 (612)
+.++++.|+-+.+ ...+.++.+-...+-.+.. ..-++..+-..+. .-|+++.=-.. +--|+-+++.+. ..
T Consensus 10 ~k~~rILiVDD~~-~~r~~l~~~L~~~G~~~v~-~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ 87 (134)
T 3to5_A 10 NKNMKILIVDDFS-TMRRIVKNLLRDLGFNNTQ-EADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKH 87 (134)
T ss_dssp CTTCCEEEECSCH-HHHHHHHHHHHHTTCCCEE-EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTT
T ss_pred CCCCEEEEEeCCH-HHHHHHHHHHHHcCCcEEE-EECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCC
Confidence 4577888876543 4555666665555522221 2235555544444 45787765554 446888888885 46
Q ss_pred CceEEc-CCCCcc---cceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 502 TVPIVA-STGGLV---DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 502 ~PvI~s-~~gg~~---e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
+|||.- ..+... +..+.|.++|+. -|-+.++|.+.|.++++
T Consensus 88 ipvI~lTa~~~~~~~~~~~~~Ga~~yl~----------KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 88 LPVLMITAEAKREQIIEAAQAGVNGYIV----------KPFTAATLKEKLDKIFE 132 (134)
T ss_dssp CCEEEEESSCCHHHHHHHHHTTCCEEEE----------SSCCHHHHHHHHHHHCC
T ss_pred CeEEEEECCCCHHHHHHHHHCCCCEEEE----------CCCCHHHHHHHHHHHHh
Confidence 787644 333322 234468889976 89999999999988764
No 271
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=30.42 E-value=32 Score=34.56 Aligned_cols=36 Identities=17% Similarity=0.264 Sum_probs=25.2
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhC-CC-eEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GH-RVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh-~V~vit~~ 127 (612)
+++|+|++.+. +|++| ..+++.|.++ |+ +|.+++..
T Consensus 19 ~~~k~vlVTGa-------tG~iG---~~l~~~L~~~~g~~~V~~~~r~ 56 (344)
T 2gn4_A 19 LDNQTILITGG-------TGSFG---KCFVRKVLDTTNAKKIIVYSRD 56 (344)
T ss_dssp TTTCEEEEETT-------TSHHH---HHHHHHHHHHCCCSEEEEEESC
T ss_pred hCCCEEEEECC-------CcHHH---HHHHHHHHhhCCCCEEEEEECC
Confidence 44567765543 46666 5678889998 97 88887654
No 272
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=30.21 E-value=41 Score=33.58 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=25.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.|||.||+ .||.|. ..+++.|.++||+|++.=.
T Consensus 4 ~~~i~~iG--------iGg~Gm--s~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIG--------IGGTFM--GGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEES--------CCSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEE--------ECHHHH--HHHHHHHHhCCCEEEEEcC
Confidence 57899888 578773 3678889999999988643
No 273
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=30.18 E-value=2.5e+02 Score=28.03 Aligned_cols=104 Identities=15% Similarity=0.187 Sum_probs=65.7
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCe
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 433 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~ 433 (612)
|.||-| ....|... -.+--.+++.+|-- +...|.|+|-. ...=...++.++..+ ++
T Consensus 138 VINa~~-~~~HPtQa----------------LaDl~Ti~e~~g~l---~gl~va~vGD~-~~rva~Sl~~~~~~~---G~ 193 (325)
T 1vlv_A 138 VYNGLT-DEFHPTQA----------------LADLMTIEENFGRL---KGVKVVFMGDT-RNNVATSLMIACAKM---GM 193 (325)
T ss_dssp EEESCC-SSCCHHHH----------------HHHHHHHHHHHSCS---TTCEEEEESCT-TSHHHHHHHHHHHHT---TC
T ss_pred EEeCCC-CCCCcHHH----------------HHHHHHHHHHhCCc---CCcEEEEECCC-CcCcHHHHHHHHHHC---CC
Confidence 456777 46777531 12234566677632 23689999984 344567888888887 89
Q ss_pred EEEEEecCC----hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCC
Q 007212 434 QIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 434 ~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
++.+++... +++.+.+++.+.+.+.++... -+ +.+.+..||++.....
T Consensus 194 ~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~--~d---~~eav~~aDvvyt~~w 245 (325)
T 1vlv_A 194 NFVACGPEELKPRSDVFKRCQEIVKETDGSVSFT--SN---LEEALAGADVVYTDVW 245 (325)
T ss_dssp EEEEESCGGGCCCHHHHHHHHHHHHHHCCEEEEE--SC---HHHHHTTCSEEEECCC
T ss_pred EEEEECCccccCCHHHHHHHHHHHHHcCCeEEEE--cC---HHHHHccCCEEEeccc
Confidence 999999743 234455566666666444333 12 2246899999887665
No 274
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=30.02 E-value=2.3e+02 Score=23.19 Aligned_cols=34 Identities=12% Similarity=-0.015 Sum_probs=23.0
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
+++++|++|... ......|...|...|+.+.|.+
T Consensus 3 ~~~~~ILivdd~----------~~~~~~l~~~L~~~~~~~~v~~ 36 (144)
T 3kht_A 3 LRSKRVLVVEDN----------PDDIALIRRVLDRKDIHCQLEF 36 (144)
T ss_dssp --CEEEEEECCC----------HHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCEEEEEeCC----------HHHHHHHHHHHHhcCCCeeEEE
Confidence 457899999865 2245567788889999855544
No 275
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=29.89 E-value=44 Score=31.59 Aligned_cols=25 Identities=20% Similarity=0.286 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 16 s~giG---~~ia~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 16 GKGIG---YATALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCc
Confidence 57777 56888999999999887643
No 276
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=29.86 E-value=2.4e+02 Score=23.37 Aligned_cols=110 Identities=15% Similarity=0.125 Sum_probs=64.3
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEe-ccChHHHHHHH--HhccEEEEcCCC-CCCcHHHHHHHHc---CCce
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA-KFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY---GTVP 504 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~-~~~~~~~~~i~--~~aDv~v~pS~~-E~~gl~~lEAma~---G~Pv 504 (612)
..+++|+.+.. ...+.+.++..+.+. ...+. .-+...+...+ ...|++++-... +.-|+.+++.+.. .+|+
T Consensus 15 ~~~iLivdd~~-~~~~~l~~~L~~~~~-~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~i 92 (152)
T 3eul_A 15 KVRVVVGDDHP-LFREGVVRALSLSGS-VNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRV 92 (152)
T ss_dssp CEEEEEECSSH-HHHHHHHHHHHHHSS-EEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEE
T ss_pred eEEEEEEcCCH-HHHHHHHHHHhhCCC-eEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeE
Confidence 56677766543 344444444444332 21121 22333333333 356888876654 4457777776653 5666
Q ss_pred EEc-CCCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 505 IVA-STGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s-~~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|+- .... ..+.+..|..+++. .|.+.++|.++|.+++..
T Consensus 93 i~~s~~~~~~~~~~~~~~g~~~~l~----------Kp~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 93 LLISAHDEPAIVYQALQQGAAGFLL----------KDSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp EEEESCCCHHHHHHHHHTTCSEEEE----------TTCCHHHHHHHHHHHHHC
T ss_pred EEEEccCCHHHHHHHHHcCCCEEEe----------cCCCHHHHHHHHHHHHcC
Confidence 543 3222 22445567888976 899999999999999876
No 277
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=29.63 E-value=40 Score=31.83 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=25.0
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 4 ~k~~lVTGa------s~gIG---~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 4 TKSALVTGA------SRGIG---RSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp SCEEEETTC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 466666632 57777 57889999999999887654
No 278
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=29.63 E-value=2.4e+02 Score=23.28 Aligned_cols=109 Identities=17% Similarity=0.112 Sum_probs=61.9
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHH-------cC
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-------YG 501 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma-------~G 501 (612)
..+++|+.+.. .....+..+....+..+.. .-+.+.+-..+. ..|++++-... +.-|+.+++.+. ..
T Consensus 14 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~~--~~~~~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~ 90 (143)
T 3m6m_D 14 SMRMLVADDHE-ANRMVLQRLLEKAGHKVLC--VNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRY 90 (143)
T ss_dssp -CEEEEECSSH-HHHHHHHHHHHC--CEEEE--ESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCC
T ss_pred cceEEEEeCCH-HHHHHHHHHHHHcCCeEEE--eCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCC
Confidence 46777776543 3444555554444422322 223444433443 46888876554 445777777764 13
Q ss_pred CceEEcCCCCcc----cceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 502 TVPIVASTGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 502 ~PvI~s~~gg~~----e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+|+|+.....-. +..+.|..+|+. .|-+.++|.++|.++...
T Consensus 91 ~pii~~s~~~~~~~~~~~~~~Ga~~~l~----------KP~~~~~L~~~l~~~~~~ 136 (143)
T 3m6m_D 91 TPVVVLSADVTPEAIRACEQAGARAFLA----------KPVVAAKLLDTLADLAVS 136 (143)
T ss_dssp CCEEEEESCCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHC--
T ss_pred CeEEEEeCCCCHHHHHHHHHcChhheee----------CCCCHHHHHHHHHHHHHh
Confidence 677654432222 334467788876 899999999999887654
No 279
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=29.53 E-value=44 Score=32.36 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=25.3
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
..|+++|+.- .||+| ..+++.|+++|++|.++..
T Consensus 24 ~~k~~lVTGa------s~GIG---~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 24 MTKTAVITGS------TSGIG---LAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TTCEEEEETC------SSHHH---HHHHHHHHHTTCEEEEECC
T ss_pred CCCEEEEeCC------CcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 3466777643 57777 5788999999999987754
No 280
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=29.44 E-value=1.5e+02 Score=29.46 Aligned_cols=112 Identities=19% Similarity=0.159 Sum_probs=66.4
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCe
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 433 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~ 433 (612)
|.|+.|.+.+.|... -.+--.+++.+|-- +...|.|+|-+....=...++.++..+ +++
T Consensus 121 VINag~g~~~HPtQ~----------------LaDl~Ti~e~~g~l---~glkva~vGD~~~~rva~Sl~~~~~~~--~G~ 179 (306)
T 4ekn_B 121 IINAGDGSNQHPTQT----------------LLDLYTIMREIGRI---DGIKIAFVGDLKYGRTVHSLVYALSLF--ENV 179 (306)
T ss_dssp EEESCSSSSCCHHHH----------------HHHHHHHHHHHSCS---TTCEEEEESCTTTCHHHHHHHHHHHTS--SSC
T ss_pred EEeCCCCCCcCcHHH----------------HHHHHHHHHHhCCc---CCCEEEEEcCCCCCcHHHHHHHHHHhc--CCC
Confidence 568888777777531 12234567777733 236899999765545567788888876 478
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCC-CCCc
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCG 491 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~-E~~g 491 (612)
++.+++...-...+.+.+.+.+.+.++.... +.+ +.++.||++...... |.++
T Consensus 180 ~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~--d~~---eav~~aDvvy~~~~q~er~~ 233 (306)
T 4ekn_B 180 EMYFVSPKELRLPKDIIEDLKAKNIKFYEKE--SLD---DLDDDIDVLYVTRIQKERFP 233 (306)
T ss_dssp EEEEECCGGGCCCHHHHHHHHHTTCCEEEES--CGG---GCCTTCSEEEECCCCGGGCC
T ss_pred EEEEECCcccccCHHHHHHHHHcCCEEEEEc--CHH---HHhcCCCEEEeCCcccccCC
Confidence 9999987431112233333334454443322 222 357899998875432 4443
No 281
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=29.42 E-value=44 Score=32.79 Aligned_cols=32 Identities=28% Similarity=0.562 Sum_probs=23.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 16 ~~I~VIG~--------G~mG---~~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 16 KHVTVIGG--------GLMG---AGIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 68999873 4444 45788899999999887644
No 282
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=29.37 E-value=36 Score=32.04 Aligned_cols=36 Identities=19% Similarity=0.290 Sum_probs=24.9
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++++|++.+. .||+| ..+++.|+++|++|.++...
T Consensus 9 ~~~~~vlVtGa-------sggiG---~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 9 LDGKCAIITGA-------GAGIG---KEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp CTTCEEEETTT-------TSHHH---HHHHHHHHTTTCEEEEEESC
T ss_pred CCCCEEEEECC-------ccHHH---HHHHHHHHHCCCEEEEEcCC
Confidence 34555554432 57777 56889999999999887643
No 283
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=29.35 E-value=50 Score=31.46 Aligned_cols=38 Identities=16% Similarity=0.155 Sum_probs=28.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+.|+ . .+ .-|-.+.+.+|+.+|+++|++|.++=..
T Consensus 1 M~vI~vs-~-KG---GvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 1 MRQVAIY-G-KG---GIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEE-E-CT---TSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CcEEEEe-c-CC---CCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 6766664 2 12 3466678889999999999999988544
No 284
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=29.09 E-value=62 Score=31.41 Aligned_cols=39 Identities=15% Similarity=0.046 Sum_probs=27.3
Q ss_pred ceEEEEEecccCccccccH-HHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGL-GDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~-~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||||+|... |. .+|. ..+...+.+.|.+.||+|.++-..
T Consensus 3 mkiLiI~gS--pr--~~s~t~~la~~~~~~l~~~g~eV~~~dL~ 42 (273)
T 1d4a_A 3 RRALIVLAH--SE--RTSFNYAMKEAAAAALKKKGWEVVESDLY 42 (273)
T ss_dssp CEEEEEECC--SC--TTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CEEEEEEeC--CC--CccHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 899999975 53 2443 344455667778899999988654
No 285
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=29.08 E-value=1.4e+02 Score=30.02 Aligned_cols=105 Identities=11% Similarity=0.152 Sum_probs=66.3
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCe
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 433 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~ 433 (612)
|.||.+ +.+.|... -.+--.+++.+|..- +...|.|+|-. ...=...++.++..+ ++
T Consensus 125 VINa~~-~~~HPtQ~----------------LaDl~Ti~e~~g~~l--~gl~va~vGD~-~~~va~Sl~~~~~~~---G~ 181 (335)
T 1dxh_A 125 VFNGLT-DEYHPTQM----------------LADVLTMREHSDKPL--HDISYAYLGDA-RNNMGNSLLLIGAKL---GM 181 (335)
T ss_dssp EEEEEC-SSCCHHHH----------------HHHHHHHHHTCSSCG--GGCEEEEESCC-SSHHHHHHHHHHHHT---TC
T ss_pred EEcCCC-CCCCcHHH----------------HHHHHHHHHHcCCCc--CCeEEEEecCC-ccchHHHHHHHHHHc---CC
Confidence 446776 77777531 122344566666111 23689999987 345567888888887 79
Q ss_pred EEEEEecCC----hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCC
Q 007212 434 QIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 434 ~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
++.+++... +.+.+.+++.+.+.+.++... -+ +.+.+..||++.....
T Consensus 182 ~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~--~d---~~eav~~aDvvytd~w 233 (335)
T 1dxh_A 182 DVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLT--ED---PKEAVKGVDFVHTDVW 233 (335)
T ss_dssp EEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEE--SC---HHHHTTTCSEEEECCC
T ss_pred EEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEE--eC---HHHHhCCCCEEEeCCc
Confidence 999999743 234455666666666444433 12 2346899999887665
No 286
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=29.01 E-value=44 Score=31.53 Aligned_cols=25 Identities=28% Similarity=0.307 Sum_probs=20.1
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 22 sggiG---~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 22 AQNIG---LACVTALAEAGARVIIADLD 46 (260)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 57888999999999887644
No 287
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=29.00 E-value=58 Score=31.08 Aligned_cols=39 Identities=18% Similarity=0.082 Sum_probs=28.0
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+.|+..- ..-|-.+...+|+.+|+++|++|.++=..
T Consensus 18 ~~vI~v~s~k----GGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 18 KSRIAVMSGK----GGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp SCEEEEECSS----SCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcCC----CCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 5666665431 12355678889999999999999998654
No 288
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=28.86 E-value=56 Score=30.28 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=28.7
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||++.|+.. .+ .-|-.+...+|+.+|+++|++|.++-..
T Consensus 2 ~~~i~v~s~-kg---GvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 2 GRIISIVSG-KG---GTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECS-ST---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceEEEEecC-CC---CCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 466666543 11 3467778899999999999999999754
No 289
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=28.86 E-value=60 Score=31.93 Aligned_cols=41 Identities=24% Similarity=0.334 Sum_probs=32.3
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++||++.|+.. .| .-|-.....+||..|++.|.+|.+|-..
T Consensus 102 ~~~kvI~vts~-kg---G~GKTtva~nLA~~lA~~G~rVLLID~D 142 (299)
T 3cio_A 102 TENNILMITGA-TP---DSGKTFVSSTLAAVIAQSDQKVLFIDAD 142 (299)
T ss_dssp CSCCEEEEEES-SS---SSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECC-CC---CCChHHHHHHHHHHHHhCCCcEEEEECC
Confidence 46788888764 12 3577789999999999999999999754
No 290
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=28.81 E-value=73 Score=31.04 Aligned_cols=43 Identities=19% Similarity=0.170 Sum_probs=33.8
Q ss_pred cCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.|+.||-+||+.-.-- .=|-|.....|..-|..+|++|+.+=.
T Consensus 19 ~~~~~KyIfVTGGVvS---~lGKGi~aaSlg~lLk~~G~~Vt~~K~ 61 (295)
T 2vo1_A 19 YFQSMKYILVTGGVIS---GIGKGIIASSVGTILKSCGLHVTSIKI 61 (295)
T ss_dssp --CCCEEEEEEECSSS---SSSHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccccceEEEEcCCccc---ccccHHHHHHHHHHHHHCCCcceeeec
Confidence 4678999999976533 456777888999999999999999864
No 291
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=28.74 E-value=38 Score=32.21 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=26.7
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 6 ~~k~vlVTGa------s~gIG---~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAG------TKGLG---KQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCC------CchhH---HHHHHHHHHCCCEEEEEcCC
Confidence 4677777743 57777 57899999999999887654
No 292
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=28.69 E-value=3.2e+02 Score=24.53 Aligned_cols=109 Identities=17% Similarity=0.153 Sum_probs=65.5
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHH---cCCceE
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI 505 (612)
..+++|+.+.+ .....+..+-...+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii 83 (233)
T 1ys7_A 7 SPRVLVVDDDS-DVLASLERGLRLSGFEVA--TAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83 (233)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhCCCEEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 35677776544 344445544444432232 2234444433433 46888876554 345777777775 367776
Q ss_pred EcC-CC---CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 506 VAS-TG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~-~g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+-. .. ...+.+..|..|++. .|.+.++|...|..++..
T Consensus 84 ~lt~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 125 (233)
T 1ys7_A 84 VLSARSSVDDRVAGLEAGADDYLV----------KPFVLAELVARVKALLRR 125 (233)
T ss_dssp EEECCCTTTCCCTTTTTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHcCCCEEEe----------CCCCHHHHHHHHHHHHhh
Confidence 443 22 234455567888876 899999999999988764
No 293
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=28.60 E-value=46 Score=32.84 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=25.2
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||.||+. |-+| ..++..|++.||+|+++...
T Consensus 21 m~~I~iIG~--------G~mG---~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 21 MMEVGFLGL--------GIMG---KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp SCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 589999983 4344 56888899999999887544
No 294
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=28.55 E-value=2.2e+02 Score=23.21 Aligned_cols=108 Identities=13% Similarity=0.154 Sum_probs=62.1
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCCCC-CcHHHHHHHH---cCCceE
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFEP-CGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~E~-~gl~~lEAma---~G~PvI 505 (612)
..+++|+.+.. .....+.+.....+-.+. ..-+...+...+. ..|++++-. ..+ -|+.+++.+. ..+|+|
T Consensus 4 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii 79 (142)
T 2qxy_A 4 TPTVMVVDESR-ITFLAVKNALEKDGFNVI--WAKNEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVA 79 (142)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHGGGTCEEE--EESSHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhCCCEEE--EECCHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEE
Confidence 34666666543 344455555444442232 2224444434443 368888766 432 4555565554 357776
Q ss_pred Ec-CCCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 506 VA-STGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s-~~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+- .... ..+.+..|..+++. .|.+.++|.+.|.+++..
T Consensus 80 ~ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 121 (142)
T 2qxy_A 80 VLSAYVDKDLIINSVKAGAVDYIL----------KPFRLDYLLERVKKIISS 121 (142)
T ss_dssp EEESCCCHHHHHHHHHHTCSCEEE----------SSCCHHHHHHHHHHHHHC
T ss_pred EEECCCCHHHHHHHHHCCcceeEe----------CCCCHHHHHHHHHHHHhh
Confidence 44 3222 22344567788876 889999999999999875
No 295
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=28.54 E-value=58 Score=30.84 Aligned_cols=25 Identities=24% Similarity=0.371 Sum_probs=20.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..++++|+++|++|++++..
T Consensus 33 Sg~iG---~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 33 SGKMG---FAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp CSHHH---HHHHHHHHHTTCEEEEEECS
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEECC
Confidence 57777 67899999999999998643
No 296
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=28.54 E-value=62 Score=32.17 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=30.0
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
++|+++.|... .+ .-|-.+...+||.+|+++|++|.++....
T Consensus 11 ~gm~~i~v~sg-KG---GvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 11 KGKTTFVFIGG-KG---GVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp TTBCEEEEEEE-ST---TSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCeEEEEEeC-CC---CchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 35655555443 12 34666788899999999999999998663
No 297
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=28.53 E-value=44 Score=31.41 Aligned_cols=25 Identities=32% Similarity=0.477 Sum_probs=20.2
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 20 sggiG---~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 20 GSGIG---LEICRAFAASGARLILIDRE 44 (254)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 57889999999999887654
No 298
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=28.51 E-value=48 Score=32.03 Aligned_cols=36 Identities=25% Similarity=0.393 Sum_probs=25.1
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++++|++.+. .||+| ..+++.|+++|++|.++..+
T Consensus 26 ~~~k~vlITGa-------sggIG---~~la~~l~~~G~~V~~~~r~ 61 (286)
T 1xu9_A 26 LQGKKVIVTGA-------SKGIG---REMAYHLAKMGAHVVVTARS 61 (286)
T ss_dssp GTTCEEEESSC-------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCEEEEeCC-------CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 34555554443 57777 57888899999999887644
No 299
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=28.48 E-value=44 Score=31.70 Aligned_cols=25 Identities=28% Similarity=0.330 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 14 s~gIG---~~ia~~l~~~G~~V~~~~r~ 38 (254)
T 1hdc_A 14 ARGLG---AEAARQAVAAGARVVLADVL 38 (254)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887644
No 300
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=28.42 E-value=47 Score=31.46 Aligned_cols=25 Identities=20% Similarity=0.306 Sum_probs=20.4
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 21 sggiG---~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 21 ASGLG---LATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 57888999999999888654
No 301
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=28.29 E-value=46 Score=30.51 Aligned_cols=39 Identities=13% Similarity=0.077 Sum_probs=31.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||+++-. +.+|....+...++..|.+.|++|.++...
T Consensus 21 ~~kv~IvY~-----S~tGnTe~~A~~ia~~l~~~g~~v~v~~l~ 59 (191)
T 1bvy_F 21 NTPLLVLYG-----SNMGTAEGTARDLADIAMSKGFAPQVATLD 59 (191)
T ss_dssp CCCEEEEEE-----CSSSHHHHHHHHHHHHHHTTTCCCEEEEGG
T ss_pred CCeEEEEEE-----CCChHHHHHHHHHHHHHHhCCCceEEeeHH
Confidence 577777753 337999999999999999999999887654
No 302
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=28.22 E-value=28 Score=33.28 Aligned_cols=35 Identities=20% Similarity=0.429 Sum_probs=25.1
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCC----CeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG----HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G----h~V~vit~~ 127 (612)
|+.|||.||+. |.+| ..++..|++.| |+|.++...
T Consensus 2 m~~m~i~iiG~--------G~mG---~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 2 MENIKLGFMGL--------GQMG---SALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp CSSSCEEEECC--------SHHH---HHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCCCEEEEECc--------CHHH---HHHHHHHHHCCCCCCCeEEEEeCC
Confidence 45689999983 4444 45677888899 899877543
No 303
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=28.18 E-value=60 Score=30.77 Aligned_cols=39 Identities=23% Similarity=0.276 Sum_probs=28.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||++.|+.. .+ .-|-.+...+|+.+|+++|++|.++=..
T Consensus 2 ~~~I~v~s~-kg---GvGKTt~a~~LA~~la~~g~~VlliD~D 40 (263)
T 1hyq_A 2 VRTITVASG-KG---GTGKTTITANLGVALAQLGHDVTIVDAD 40 (263)
T ss_dssp CEEEEEEES-SS---CSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECC-CC---CCCHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 455555542 11 3467788899999999999999998654
No 304
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=28.14 E-value=46 Score=31.79 Aligned_cols=25 Identities=28% Similarity=0.411 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 22 s~gIG---~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 22 GSGLG---RATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887644
No 305
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=28.13 E-value=33 Score=32.33 Aligned_cols=25 Identities=20% Similarity=0.271 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 sggiG---~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 16 SQGIG---LATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CChHH---HHHHHHHHHCCCEEEEECCC
Confidence 57777 56888999999999887654
No 306
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=27.99 E-value=60 Score=31.44 Aligned_cols=25 Identities=28% Similarity=0.381 Sum_probs=20.5
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 25 s~gIG---~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 25 NSGLG---AVTARELARRGATVIMAVRD 49 (291)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 57887 57889999999999887654
No 307
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=27.96 E-value=29 Score=34.39 Aligned_cols=36 Identities=25% Similarity=0.407 Sum_probs=26.0
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCC-------CeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-------HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G-------h~V~vit~~ 127 (612)
+++|+|++.+. +|++| ..|++.|.++| |+|.++...
T Consensus 12 ~~~~~vlVtGa-------~G~iG---~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGA-------AGMVG---RKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETT-------TSHHH---HHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECC-------CcHHH---HHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 45688776653 46776 56788899999 788887643
No 308
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=27.95 E-value=45 Score=31.79 Aligned_cols=25 Identities=24% Similarity=0.298 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 16 ARGMG---ASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887644
No 309
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=27.94 E-value=44 Score=31.57 Aligned_cols=24 Identities=17% Similarity=0.322 Sum_probs=18.4
Q ss_pred cccHHHHhhchHHHHHhCCCe-EEEEEe
Q 007212 100 TGGLGDVLGGLPPALAANGHR-VMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~-V~vit~ 126 (612)
.||+| ..+++.|+++|++ |.++..
T Consensus 14 s~gIG---~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 14 LGGIG---LDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp TSHHH---HHHHHHHHHTCCSEEEEEES
T ss_pred CChHH---HHHHHHHHHCCCcEEEEEec
Confidence 47777 5788999999997 666543
No 310
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=27.93 E-value=39 Score=33.63 Aligned_cols=35 Identities=20% Similarity=0.327 Sum_probs=26.4
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCC-CeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G-h~V~vit~~ 127 (612)
++.|||.||+. |-+| ..++..|++.| |+|+++...
T Consensus 22 ~M~m~IgvIG~--------G~mG---~~lA~~L~~~G~~~V~~~dr~ 57 (317)
T 4ezb_A 22 SMMTTIAFIGF--------GEAA---QSIAGGLGGRNAARLAAYDLR 57 (317)
T ss_dssp TSCCEEEEECC--------SHHH---HHHHHHHHTTTCSEEEEECGG
T ss_pred ccCCeEEEECc--------cHHH---HHHHHHHHHcCCCeEEEEeCC
Confidence 34689999983 4333 56888899999 999887654
No 311
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=27.85 E-value=2.5e+02 Score=22.90 Aligned_cols=107 Identities=17% Similarity=0.212 Sum_probs=61.1
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--HhccEEEEcCCC-CCCcHHHHHHHH---cCCceEEc
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMR---YGTVPIVA 507 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI~s 507 (612)
+++|+.+.+ .....+..+....+-.+ ...-+...+-..+ ...|++++-... +.-|+.+++.+. ..+|+|+-
T Consensus 6 ~ILivdd~~-~~~~~l~~~L~~~g~~v--~~~~~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~l 82 (137)
T 3cfy_A 6 RVLLVEDST-SLAILYKQYVKDEPYDI--FHVETGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIA 82 (137)
T ss_dssp EEEEECSCT-THHHHHHHHTTTSSSEE--EEESSHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEeCCH-HHHHHHHHHHHhcCceE--EEeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEE
Confidence 566666544 34444444443333222 2222344433333 246888876554 335676777664 35666543
Q ss_pred -CCCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 508 -STGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 508 -~~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
.... ..+.++.|..+++. .|.+.++|...|..++..
T Consensus 83 s~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~~~~ 122 (137)
T 3cfy_A 83 TAHGSVDLAVNLIQKGAEDFLE----------KPINADRLKTSVALHLKR 122 (137)
T ss_dssp ESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EecCcHHHHHHHHHCCccEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 3222 23344567788876 899999999999888764
No 312
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=27.72 E-value=40 Score=32.43 Aligned_cols=35 Identities=26% Similarity=0.434 Sum_probs=25.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 4 ~~k~vlVTGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 4 SAKVWLVTGA------SSGFG---RAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCCEEEETTT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCcEEEEECC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3566666632 57777 57888999999999877654
No 313
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=27.70 E-value=49 Score=31.72 Aligned_cols=25 Identities=12% Similarity=0.057 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 40 sggIG---~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 40 GHGIG---RLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEEcC
Confidence 57777 57888999999999887644
No 314
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=27.57 E-value=31 Score=34.39 Aligned_cols=35 Identities=29% Similarity=0.549 Sum_probs=25.0
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCC----CeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG----HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G----h~V~vit~~ 127 (612)
|+.|||.||+. |.+| ..++..|.+.| |+|+++...
T Consensus 20 ~~~mkI~iIG~--------G~mG---~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 20 FQSMSVGFIGA--------GQLA---FALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp --CCCEEEESC--------SHHH---HHHHHHHHHTTSSCGGGEEEECSC
T ss_pred cCCCEEEEECC--------CHHH---HHHHHHHHHCCCCCcceEEEECCC
Confidence 45689999983 4444 56778899999 999887654
No 315
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=27.55 E-value=2.9e+02 Score=28.00 Aligned_cols=91 Identities=15% Similarity=0.094 Sum_probs=58.4
Q ss_pred HHHHHHHhCCC-CCCCCcEEEEEccCccc--cCHHHHHHHHHhcccCCeEEEEEecC-C----hhHHHHHHHHHHHCCCc
Q 007212 388 KEALQAEVGLP-VDRNIPVIGFIGRLEEQ--KGSDILAAAIPHFIKENVQIIVLGTG-K----KPMEKQLEQLEILYPEK 459 (612)
Q Consensus 388 ~~~l~~~~gl~-~~~~~~~i~~iGrl~~~--Kg~d~li~A~~~l~~~~~~lvivG~g-~----~~~~~~l~~l~~~~~~~ 459 (612)
--.+++.+|-+ -+.-+.+|.|+|-+.+- .=...++.++..+ ++++.+++.. . +++.+.+++.+.+.+..
T Consensus 176 l~TI~E~~g~~~l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~ 252 (359)
T 1zq6_A 176 ALALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRM---GMDVTLLCPTPDYILDERYMDWAAQNVAESGGS 252 (359)
T ss_dssp HHHHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHT---TCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCE
T ss_pred HHHHHHHhCCCcccCCeeEEEEEecccccccchHHHHHHHHHHc---CCEEEEEcCccccCCCHHHHHHHHHHHHHcCCe
Confidence 34567777741 12212239999987654 5578899999988 7899999976 3 24555566666665544
Q ss_pred eEEEeccChHHHHHHHHhccEEEEcCC
Q 007212 460 ARGVAKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 460 v~~~~~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
+... .+. .+.++.||++.....
T Consensus 253 v~~~--~d~---~eav~~aDvVyt~~w 274 (359)
T 1zq6_A 253 LQVS--HDI---DSAYAGADVVYAKSW 274 (359)
T ss_dssp EEEE--CCH---HHHHTTCSEEEEECC
T ss_pred EEEE--CCH---HHHhcCCCEEEECCc
Confidence 4322 222 246899999877653
No 316
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=27.45 E-value=52 Score=31.26 Aligned_cols=25 Identities=32% Similarity=0.465 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 18 s~giG---~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 18 SRGIG---YGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57877 56888999999999877643
No 317
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=27.41 E-value=39 Score=33.00 Aligned_cols=24 Identities=38% Similarity=0.332 Sum_probs=18.5
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+|++| ..+++.|.++||+|.++..
T Consensus 10 tG~iG---~~l~~~L~~~G~~V~~~~r 33 (322)
T 2p4h_X 10 TGFLG---SWIIKSLLENGYSVNTTIR 33 (322)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEECC
T ss_pred hhHHH---HHHHHHHHHCCCEEEEEEe
Confidence 46665 5678889999999987654
No 318
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=27.34 E-value=46 Score=32.36 Aligned_cols=25 Identities=20% Similarity=0.379 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 27 sggIG---~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 27 ATGIG---KAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887644
No 319
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=27.34 E-value=2.4e+02 Score=22.58 Aligned_cols=109 Identities=13% Similarity=0.114 Sum_probs=63.5
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--HhccEEEEcCCC-CCCcHHHHHHHHc---CCceEE
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY---GTVPIV 506 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI~ 506 (612)
++++|+.+.. ...+.+.++-.+.+-.+.... -+.+.+...+ ...|++++-... +.-|+.+++.+.. .+|+|+
T Consensus 2 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~~-~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 79 (134)
T 3f6c_A 2 LNAIIIDDHP-LAIAAIRNLLIKNDIEILAEL-TEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIII 79 (134)
T ss_dssp EEEEEECCCH-HHHHHHHHHHHHTTEEEEEEE-SSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEE
T ss_pred eEEEEEcCCH-HHHHHHHHHHhhCCcEEEEEc-CCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEE
Confidence 4566666543 345555555555542222111 1222222222 457888877654 4467777777653 556654
Q ss_pred c-CCC---CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 507 A-STG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s-~~g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
- ... ...+.++.|..+++. .|.+.+++.++|..++..
T Consensus 80 ~s~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~i~~~~~~ 120 (134)
T 3f6c_A 80 VSAKNDHFYGKHCADAGANGFVS----------KKEGMNNIIAAIEAAKNG 120 (134)
T ss_dssp EECC---CTHHHHHHTTCSEEEE----------GGGCTHHHHHHHHHHHTT
T ss_pred EeCCCChHHHHHHHHhCCCEEEe----------CCCCHHHHHHHHHHHHCC
Confidence 3 322 233445567888876 888999999999998875
No 320
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=27.32 E-value=49 Score=31.66 Aligned_cols=25 Identities=16% Similarity=0.469 Sum_probs=20.1
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 17 s~gIG---~~ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 17 SMGIG---RAIAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEecC
Confidence 57777 56889999999999887643
No 321
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=27.21 E-value=50 Score=31.61 Aligned_cols=25 Identities=16% Similarity=0.371 Sum_probs=20.2
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 15 s~gIG---~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 15 ASGIG---RAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887644
No 322
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=27.14 E-value=37 Score=31.74 Aligned_cols=23 Identities=22% Similarity=0.390 Sum_probs=18.7
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
.||+| ..+++.|+++|++|.++.
T Consensus 10 sggiG---~~~a~~l~~~G~~v~~~~ 32 (245)
T 2ph3_A 10 SRGIG---RAIALRLAEDGFALAIHY 32 (245)
T ss_dssp TSHHH---HHHHHHHHTTTCEEEEEE
T ss_pred CchHH---HHHHHHHHHCCCEEEEEc
Confidence 46666 578899999999998874
No 323
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=27.13 E-value=45 Score=32.24 Aligned_cols=23 Identities=26% Similarity=0.413 Sum_probs=18.7
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
.||+| ..+++.|+++|++|.++.
T Consensus 53 sggIG---~~la~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 53 GRGIG---REIAKMLAKSVSHVICIS 75 (285)
T ss_dssp TSHHH---HHHHHHHTTTSSEEEEEE
T ss_pred CcHHH---HHHHHHHHHcCCEEEEEc
Confidence 57777 468889999999998854
No 324
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=27.08 E-value=72 Score=28.62 Aligned_cols=40 Identities=0% Similarity=0.003 Sum_probs=28.0
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC------CCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN------GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~------Gh~V~vit~~ 127 (612)
|||++|... |. +.|-...++..+.+.+.+. |++|.++-..
T Consensus 1 Mkilii~gS--~r-~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~ 46 (191)
T 1t0i_A 1 MKVGIIMGS--VR-AKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQ 46 (191)
T ss_dssp CEEEEEECC--CC-SSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHH
T ss_pred CeEEEEeCC--CC-CCCchHHHHHHHHHHHHHhhccCCCCceEEEEehh
Confidence 899999975 42 2354565666677777776 7999888643
No 325
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=26.94 E-value=39 Score=32.16 Aligned_cols=25 Identities=28% Similarity=0.369 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 23 sggiG---~~la~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 23 TKGIG---HAIVEEFAGFGAVIHTCARN 47 (266)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 57888999999999887643
No 326
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=26.90 E-value=49 Score=31.48 Aligned_cols=25 Identities=24% Similarity=0.388 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 21 s~gIG---~~ia~~l~~~G~~V~~~~r~ 45 (263)
T 3ak4_A 21 SKGIG---AAIARALDKAGATVAIADLD 45 (263)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999877643
No 327
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=26.90 E-value=43 Score=33.00 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=23.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC-CCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~ 127 (612)
|||++++. +|++| ..|++.|.++ ||+|.++...
T Consensus 1 m~vlVtGa-------tG~iG---~~l~~~L~~~~g~~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGV-------NGFIG---NHLTERLLREDHYEVYGLDIG 34 (345)
T ss_dssp CEEEEETC-------SSHHH---HHHHHHHHHSTTCEEEEEESC
T ss_pred CeEEEECC-------CcHHH---HHHHHHHHHhCCCEEEEEeCC
Confidence 67766553 46665 5678889998 8999888754
No 328
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=26.89 E-value=47 Score=32.23 Aligned_cols=39 Identities=10% Similarity=0.051 Sum_probs=27.3
Q ss_pred CceEEEEEecccCccccccHHH---HhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGD---VLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~---~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|||++++....+ .-.. ....+++++.++||+|.++.+.
T Consensus 2 ~~~i~il~gg~s~-----e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSA-----EREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSST-----THHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCc-----cceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 5899999853211 1111 2356899999999999998765
No 329
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=26.85 E-value=45 Score=31.49 Aligned_cols=25 Identities=32% Similarity=0.529 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 24 s~gIG---~~ia~~l~~~G~~V~~~~r~ 48 (247)
T 1uzm_A 24 NRGIG---LAIAQRLAADGHKVAVTHRG 48 (247)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887644
No 330
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=26.84 E-value=39 Score=34.35 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=23.1
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+|+|++.+. +|.+| ..|++.|.++||+|.++..
T Consensus 11 ~~~vlVTG~-------tGfIG---~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 11 GSRVMVIGG-------DGYCG---WATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp -CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEEC
T ss_pred CCeEEEeCC-------CcHHH---HHHHHHHHhCCCeEEEEEe
Confidence 577775543 34444 6688999999999988853
No 331
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=26.80 E-value=55 Score=30.54 Aligned_cols=25 Identities=36% Similarity=0.585 Sum_probs=19.7
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 sggiG---~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 16 GKGIG---RGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888899999999887643
No 332
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=26.76 E-value=63 Score=29.11 Aligned_cols=38 Identities=13% Similarity=0.080 Sum_probs=31.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHh-CCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~-~Gh~V~vit~~ 127 (612)
|||++|... + +|-...+...+++.+.+ .|++|.++...
T Consensus 5 ~kiliiy~S--~---~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 5 GKVLVIYDT--R---TGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp EEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CEEEEEEEC--C---CcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 699999753 4 68888888899999998 99999888654
No 333
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=26.72 E-value=49 Score=31.25 Aligned_cols=25 Identities=24% Similarity=0.365 Sum_probs=20.1
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 sggiG---~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 16 GSGIG---RAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 57889999999999887644
No 334
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=26.70 E-value=46 Score=30.22 Aligned_cols=36 Identities=22% Similarity=0.183 Sum_probs=26.3
Q ss_pred CceEEEEEecccCccccccHH-HHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~-~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+||++... |+.+ ....+|.+.|.+.|++|.|+.+.
T Consensus 5 ~k~IllgvT--------Gs~aa~k~~~ll~~L~~~g~~V~vv~T~ 41 (175)
T 3qjg_A 5 GENVLICLC--------GSVNSINISHYIIELKSKFDEVNVIAST 41 (175)
T ss_dssp CCEEEEEEC--------SSGGGGGHHHHHHHHTTTCSEEEEEECT
T ss_pred CCEEEEEEe--------CHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 468877653 3332 24567899999999999999876
No 335
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=26.66 E-value=2.5e+02 Score=22.61 Aligned_cols=110 Identities=12% Similarity=0.054 Sum_probs=64.1
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCCC--CCcHHHHHHHH--cCCceE
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFE--PCGLIQLHAMR--YGTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~E--~~gl~~lEAma--~G~PvI 505 (612)
..+++|+.+.. ...+.+.+.....+-.+.. ..-+.+.+...+. ..|++++-.... .-|+.+++.+. ..+|+|
T Consensus 9 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~~-~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii 86 (140)
T 3cg0_A 9 LPGVLIVEDGR-LAAATLRIQLESLGYDVLG-VFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPII 86 (140)
T ss_dssp CCEEEEECCBH-HHHHHHHHHHHHHTCEEEE-EESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEE
T ss_pred CceEEEEECCH-HHHHHHHHHHHHCCCeeEE-EECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEE
Confidence 56777777543 3444444444443322321 1223343333332 468888766543 35666666654 478876
Q ss_pred EcC-CCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 506 VAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+-. ... ..+.+..|..+++. .|.+.++|...|..++..
T Consensus 87 ~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~i~~~~~~ 128 (140)
T 3cg0_A 87 FITSSQDVETFQRAKRVNPFGYLA----------KPVAADTLHRSIEMAIHK 128 (140)
T ss_dssp EEECCCCHHHHHHHHTTCCSEEEE----------ESCCHHHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHhcCCCEEEe----------CCCCHHHHHHHHHHHHhc
Confidence 543 222 22344567788876 889999999999998875
No 336
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=26.61 E-value=50 Score=29.56 Aligned_cols=37 Identities=14% Similarity=0.255 Sum_probs=25.5
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|++|||.+-+.. +|.. .=..|...|.+.||+|.=+.+
T Consensus 1 m~~MkIaigsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~ 37 (162)
T 2vvp_A 1 MSGMRVYLGADH-------AGYE-LKQRIIEHLKQTGHEPIDCGA 37 (162)
T ss_dssp --CCEEEEEECH-------HHHH-HHHHHHHHHHHTTCEEEECSC
T ss_pred CCCCEEEEEeCc-------hhHH-HHHHHHHHHHHCCCEEEEeCC
Confidence 345999877653 5554 445688889999999977654
No 337
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=26.59 E-value=55 Score=30.85 Aligned_cols=25 Identities=40% Similarity=0.541 Sum_probs=20.1
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 16 s~gIG---~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 16 SSGIG---EATARALAAEGAAVAIAARR 40 (247)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 57877 56888999999999887644
No 338
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=26.28 E-value=32 Score=31.73 Aligned_cols=37 Identities=11% Similarity=0.146 Sum_probs=21.8
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEE
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVM 122 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~ 122 (612)
|.+|||++|... |. .++....+.+...+....|++|.
T Consensus 4 M~~mkIl~I~GS--~r--~~s~t~~la~~~~~~~~~g~~v~ 40 (199)
T 4hs4_A 4 TSPLHFVTLLGS--LR--KASFNAAVARALPEIAPEGIAIT 40 (199)
T ss_dssp -CCEEEEEEECC--CS--TTCHHHHHHHHHHHHCCTTEEEE
T ss_pred CCCCEEEEEEcC--CC--CCChHHHHHHHHHHHccCCCEEE
Confidence 557999999975 43 45554444333333334677877
No 339
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=26.27 E-value=67 Score=32.05 Aligned_cols=34 Identities=32% Similarity=0.489 Sum_probs=23.4
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+|||+|+++ |. +.....++|.+.||+|..+..+
T Consensus 1 ~~mrivf~Gt---p~--------fa~~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 1 MSLKIVFAGT---PQ--------FAVPTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCCEEEEEEC---SG--------GGHHHHHHHHHSSSEEEEEECC
T ss_pred CCcEEEEECC---CH--------HHHHHHHHHHHCCCeEEEEEeC
Confidence 4799999985 32 2223456778889998776654
No 340
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=26.26 E-value=51 Score=31.25 Aligned_cols=25 Identities=28% Similarity=0.416 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 15 s~gIG---~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 15 ARGIG---RAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887644
No 341
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=26.25 E-value=51 Score=32.92 Aligned_cols=21 Identities=19% Similarity=0.074 Sum_probs=18.3
Q ss_pred hhchHHHHHhCCCeEEEEEec
Q 007212 107 LGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 107 ~~~L~~~L~~~Gh~V~vit~~ 127 (612)
-..+|+++.++|++|++++..
T Consensus 68 G~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 68 GATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp HHHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHHHHHCCCEEEEEecC
Confidence 357899999999999999865
No 342
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=26.23 E-value=45 Score=30.84 Aligned_cols=33 Identities=24% Similarity=0.548 Sum_probs=24.2
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |-+| ..++..|++.||+|.++...
T Consensus 19 ~~~I~iiG~--------G~mG---~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGK--------GNMG---QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp -CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECC--------CHHH---HHHHHHHHHCCCEEEEEcCC
Confidence 689999883 4444 56788899999999887543
No 343
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=26.15 E-value=50 Score=32.27 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=28.1
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
++|+|++|+. | .+....++.|.+.|++|+|++|..
T Consensus 12 ~~k~VLVVGg--------G---~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGG--------G---EVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEE--------S---HHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECC--------c---HHHHHHHHHHHhCCCEEEEEcCCC
Confidence 5788998873 2 355778888999999999999874
No 344
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=26.14 E-value=48 Score=32.96 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=25.5
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+.|||.+|+. |-+| ..++..|++.||+|+++...
T Consensus 30 ~~~~I~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGT--------GSMG---LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECC--------TTTH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECc--------cHHH---HHHHHHHHhCCCeEEEEcCC
Confidence 3689999984 4344 46788899999999887544
No 345
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=26.13 E-value=2.5e+02 Score=22.33 Aligned_cols=106 Identities=14% Similarity=0.110 Sum_probs=63.6
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc-----CCceE
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTVPI 505 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~PvI 505 (612)
+++|+.+.+ .....+..+....+-.+. ..-+...+-..+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 4 ~ILivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii 80 (122)
T 3gl9_A 4 KVLLVDDSA-VLRKIVSFNLKKEGYEVI--EAENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVI 80 (122)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEE
T ss_pred eEEEEeCCH-HHHHHHHHHHHHCCcEEE--EeCCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEE
Confidence 456666543 344455555444442232 2334555444444 35888876554 4467888887743 57776
Q ss_pred Ec-CCCCc---ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 506 VA-STGGL---VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 506 ~s-~~gg~---~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
+- ..+.. .+.++.|..+|+. .|-+.+++...|.++++
T Consensus 81 ~~s~~~~~~~~~~~~~~Ga~~~l~----------KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 81 VLTAKGGEEDESLALSLGARKVMR----------KPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp EEESCCSHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHC
T ss_pred EEecCCchHHHHHHHhcChhhhcc----------CCCCHHHHHHHHHHHhc
Confidence 43 33322 2334567888876 89999999999988764
No 346
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=26.00 E-value=1.6e+02 Score=29.13 Aligned_cols=111 Identities=17% Similarity=0.187 Sum_probs=67.8
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCe
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 433 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~ 433 (612)
|.|+.|-+.+.|... -.+--.+++.+|-- +...|.|+|-+....=...++.++..+ ++
T Consensus 125 VINag~g~~~HPtQ~----------------LaDl~Ti~e~~g~l---~gl~va~vGD~~~~rva~Sl~~~~~~~---G~ 182 (308)
T 1ml4_A 125 VINAGDGSNQHPTQT----------------LLDLYTIKKEFGRI---DGLKIGLLGDLKYGRTVHSLAEALTFY---DV 182 (308)
T ss_dssp EEEEEETTSCCHHHH----------------HHHHHHHHHHSSCS---SSEEEEEESCTTTCHHHHHHHHHGGGS---CE
T ss_pred EEeCccCCccCcHHH----------------HHHHHHHHHHhCCC---CCeEEEEeCCCCcCchHHHHHHHHHHC---CC
Confidence 568887666777531 12234566777632 236899999875556678888888888 89
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCC-CCCc
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCG 491 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~-E~~g 491 (612)
++.+++...-.....+.+.+.+.+.++... -+.+ +.+..||++...... |.+|
T Consensus 183 ~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~--~d~~---eav~~aDvvyt~~~q~er~~ 236 (308)
T 1ml4_A 183 ELYLISPELLRMPRHIVEELREKGMKVVET--TTLE---DVIGKLDVLYVTRIQKERFP 236 (308)
T ss_dssp EEEEECCGGGCCCHHHHHHHHHTTCCEEEE--SCTH---HHHTTCSEEEECCCCGGGSS
T ss_pred EEEEECCccccCCHHHHHHHHHcCCeEEEE--cCHH---HHhcCCCEEEECCccccccC
Confidence 999999743111223334444555333332 2222 468999998876543 4454
No 347
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=25.88 E-value=44 Score=31.16 Aligned_cols=25 Identities=24% Similarity=0.432 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCC--CeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~G--h~V~vit~~ 127 (612)
.||+| ..+++.|+++| ++|.++...
T Consensus 12 sggiG---~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 12 NRGIG---LGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp SSHHH---HHHHHHHHTCTTCCEEEEEESS
T ss_pred CchHH---HHHHHHHHhcCCCcEEEEEecC
Confidence 46776 57888999999 999887654
No 348
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=25.82 E-value=2.4e+02 Score=27.93 Aligned_cols=103 Identities=14% Similarity=0.069 Sum_probs=66.0
Q ss_pred eeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHHHHhCCCCCCCCcEEEEEccCccccCHHHHHHHHHhcccCCe
Q 007212 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 433 (612)
Q Consensus 354 I~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gl~~~~~~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~ 433 (612)
|.||-| ....|... -.+--.+++.+|-- +...|.|+|-+ ..=...++.++..+ ++
T Consensus 126 VINa~~-~~~HPtQa----------------LaDl~Ti~e~~g~l---~gl~va~vGD~--~rva~Sl~~~~~~~---g~ 180 (315)
T 1pvv_A 126 VINGLS-DFSHPCQA----------------LADYMTIWEKKGTI---KGVKVVYVGDG--NNVAHSLMIAGTKL---GA 180 (315)
T ss_dssp EEEEEC-SSCCHHHH----------------HHHHHHHHHHHSCC---TTCEEEEESCC--CHHHHHHHHHHHHT---TC
T ss_pred EEcCCC-CCCCcHHH----------------HHHHHHHHHHhCCc---CCcEEEEECCC--cchHHHHHHHHHHC---CC
Confidence 446777 46777531 12234566677632 23689999987 45567888888887 88
Q ss_pred EEEEEecCC----hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCC
Q 007212 434 QIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 434 ~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~ 486 (612)
++.+++... +.+.+.+++.+.+.+.++... -+ +.+.+..||++.....
T Consensus 181 ~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~--~d---~~eav~~aDvvy~~~w 232 (315)
T 1pvv_A 181 DVVVATPEGYEPDEKVIKWAEQNAAESGGSFELL--HD---PVKAVKDADVIYTDVW 232 (315)
T ss_dssp EEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEE--SC---HHHHTTTCSEEEECCC
T ss_pred EEEEECCccccCCHHHHHHHHHHHHHcCCeEEEE--eC---HHHHhCCCCEEEEcce
Confidence 999999743 234455566666666444333 12 2346899999888665
No 349
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=25.80 E-value=46 Score=30.45 Aligned_cols=33 Identities=36% Similarity=0.641 Sum_probs=23.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++. .|.+| ..++..|.+.||+|.++...
T Consensus 1 m~i~iiGa-------~G~~G---~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGG-------TGNLG---KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcC-------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 67777652 24444 56788899999999887654
No 350
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=25.76 E-value=63 Score=32.48 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=23.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|++|||+|++. | .+...+.++|.+.||+|..+...
T Consensus 20 ~~~mrIvf~G~---~--------~fa~~~L~~L~~~~~~i~~Vvt~ 54 (329)
T 2bw0_A 20 FQSMKIAVIGQ---S--------LFGQEVYCHLRKEGHEVVGVFTV 54 (329)
T ss_dssp -CCCEEEEECC---H--------HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCEEEEEcC---c--------HHHHHHHHHHHHCCCeEEEEEeC
Confidence 56799999952 2 23344567788889998766554
No 351
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=25.67 E-value=27 Score=35.12 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=25.3
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCC-------CeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-------HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G-------h~V~vit~~ 127 (612)
|..|||++|+. |.+| ..++..|++.| |+|+++...
T Consensus 6 m~~mkI~iIG~--------G~mG---~~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 6 MASKKVCIVGS--------GNWG---SAIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp -CCEEEEEECC--------SHHH---HHHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred cCCCeEEEECC--------CHHH---HHHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 55799999983 4444 35677788888 999888654
No 352
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=25.66 E-value=40 Score=31.68 Aligned_cols=25 Identities=24% Similarity=0.417 Sum_probs=19.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 15 sggiG---~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 15 TLGIG---LAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46766 57889999999999887643
No 353
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=25.62 E-value=50 Score=30.91 Aligned_cols=25 Identities=32% Similarity=0.517 Sum_probs=20.1
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 11 s~giG---~~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 11 SRGIG---RAIAEALVARGYRVAIASRN 35 (239)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 57888999999999887654
No 354
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=25.61 E-value=51 Score=31.98 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=24.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||.+|+. |-+| ..++..|++.||+|+++...
T Consensus 2 ~~i~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGL--------GIMG---SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEee--------cHHH---HHHHHHHHHCCCeEEEEcCC
Confidence 88999873 4444 56788899999999877544
No 355
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=25.56 E-value=61 Score=30.77 Aligned_cols=25 Identities=20% Similarity=0.506 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 16 SSGIG---LAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 57777 57888999999999887643
No 356
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=25.56 E-value=61 Score=30.04 Aligned_cols=42 Identities=10% Similarity=0.126 Sum_probs=27.5
Q ss_pred CceEEEEEecccCccccccH-HHHhhchHHHHHhC--CCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGL-GDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~-~~~~~~L~~~L~~~--Gh~V~vit~~ 127 (612)
.|||++|... |....++. ...+..+.+.+.+. |++|.++-..
T Consensus 4 M~kiLiI~gS--pr~~~~S~s~~l~~~~~~~~~~~~~g~ev~~~dL~ 48 (211)
T 3p0r_A 4 MTKVLFVKAN--NRPAEQAVSVKLYEAFLASYKEAHPNDTVVELDLY 48 (211)
T ss_dssp CCEEEEEECC--CSCTTTCHHHHHHHHHHHHHHHHCTTSEEEEEEGG
T ss_pred cCEEEEEEeC--CCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 4899999975 42113444 34445566677666 8999988654
No 357
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=25.51 E-value=67 Score=30.01 Aligned_cols=37 Identities=16% Similarity=0.012 Sum_probs=26.8
Q ss_pred CCceEEEEEecccCcccccc-HHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGG-LGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG-~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++||++--+ |+ ...+...|.+.|.+.|++|.|+.+.
T Consensus 3 ~~k~IllgvT--------Gaiaa~k~~~ll~~L~~~g~eV~vv~T~ 40 (209)
T 3zqu_A 3 GPERITLAMT--------GASGAQYGLRLLDCLVQEEREVHFLISK 40 (209)
T ss_dssp SCSEEEEEEC--------SSSCHHHHHHHHHHHHHTTCEEEEEECH
T ss_pred CCCEEEEEEE--------CHHHHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3467766543 33 2345678999999999999999865
No 358
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=25.45 E-value=42 Score=31.38 Aligned_cols=25 Identities=28% Similarity=0.504 Sum_probs=19.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 sggiG---~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 16 TRGIG---RAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888899999999887644
No 359
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=25.39 E-value=31 Score=33.35 Aligned_cols=32 Identities=31% Similarity=0.484 Sum_probs=22.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..|++.|. +||+|.++...
T Consensus 1 m~ilVtGa-------tG~iG---~~l~~~L~-~g~~V~~~~r~ 32 (299)
T 1n2s_A 1 MNILLFGK-------TGQVG---WELQRSLA-PVGNLIALDVH 32 (299)
T ss_dssp CEEEEECT-------TSHHH---HHHHHHTT-TTSEEEEECTT
T ss_pred CeEEEECC-------CCHHH---HHHHHHhh-cCCeEEEeccc
Confidence 67776654 46665 56777888 89999887643
No 360
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=25.38 E-value=49 Score=28.41 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=29.0
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
|||+++-. |.+|....+...+++.|.+.|++|.++.
T Consensus 2 ~ki~I~Y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 2 ADITLISG-----STLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CSEEEECC-----TTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEEE-----CCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 57776632 3479999999999999999999998763
No 361
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=25.29 E-value=71 Score=30.02 Aligned_cols=42 Identities=19% Similarity=0.191 Sum_probs=27.5
Q ss_pred CceEEEEEecccCcc--ccccHH-HHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWS--KTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~--~~GG~~-~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|... |.. ..++.. ..+..+.+.+.+.||+|.++-..
T Consensus 25 M~kiLiI~gs--p~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~ 69 (218)
T 3rpe_A 25 MSNVLIINAM--KEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD 69 (218)
T ss_dssp CCCEEEEECC--CCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred CcceEEEEeC--CCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 3699999875 531 123444 34445666677789999998765
No 362
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=25.13 E-value=2.7e+02 Score=22.39 Aligned_cols=108 Identities=13% Similarity=0.147 Sum_probs=62.7
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHH---cCCceEE
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPIV 506 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI~ 506 (612)
.+++|+.+.+ .....+..+-...+-.+. ..-+....-..+. ..|++++-... +.-|+.+++.+. .++|+|.
T Consensus 4 ~~Ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 80 (132)
T 3crn_A 4 KRILIVDDDT-AILDSTKQILEFEGYEVE--IAATAGEGLAKIENEFFNLALFXIKLPDMEGTELLEKAHKLRPGMKKIM 80 (132)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEECSBCSSSBHHHHHHHHHHHCTTSEEEE
T ss_pred cEEEEEeCCH-HHHHHHHHHHHHCCceEE--EeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCcEEE
Confidence 3566666543 344445554444442232 2224444333333 46888876544 335676776664 3567764
Q ss_pred c-CCCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 507 A-STGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s-~~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
- .... ..+.++.|..+++. .|.+.++|...|.+++..
T Consensus 81 ~s~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~~~~ 121 (132)
T 3crn_A 81 VTGYASLENSVFSLNAGADAYIM----------KPVNPRDLLEKIKEKLDE 121 (132)
T ss_dssp EESCCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EeccccHHHHHHHHhccchhhcc----------CCCCHHHHHHHHHHHHhc
Confidence 3 3322 23345567889976 889999999999988764
No 363
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=25.12 E-value=71 Score=31.27 Aligned_cols=42 Identities=12% Similarity=0.057 Sum_probs=29.9
Q ss_pred CCCceEEEEEecccCccccccH-HHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGL-GDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~-~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+..|||++|... |. .+|. ...+..+++.+.+.|++|.++-..
T Consensus 56 ~~~mKILiI~GS--~R--~~S~T~~La~~~~~~l~~~G~eveiidL~ 98 (279)
T 2fzv_A 56 APPVRILLLYGS--LR--ARSFSRLAVEEAARLLQFFGAETRIFDPS 98 (279)
T ss_dssp CSCCEEEEEESC--CS--SSCHHHHHHHHHHHHHHHTTCEEEEBCCT
T ss_pred CCCCEEEEEEeC--CC--CCCHHHHHHHHHHHHHhhCCCEEEEEehh
Confidence 346999999975 43 3454 445555777788889999988654
No 364
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=25.10 E-value=32 Score=33.42 Aligned_cols=32 Identities=25% Similarity=0.483 Sum_probs=22.2
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
+.|||++|+. |.+| ..++..|++.||+|.++.
T Consensus 2 ~~m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 2 NAMKLGFIGL--------GIMG---SPMAINLARAGHQLHVTT 33 (295)
T ss_dssp --CEEEECCC--------STTH---HHHHHHHHHTTCEEEECC
T ss_pred CCCEEEEEcc--------CHHH---HHHHHHHHhCCCEEEEEc
Confidence 3489999973 4344 346777889999997765
No 365
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=24.86 E-value=58 Score=32.55 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=23.1
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|++|||+|+++ |. +.....++|.+.||+|..+..+
T Consensus 5 ~~~mrivf~Gt---~~--------fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGT---PD--------FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECC---SH--------HHHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEec---CH--------HHHHHHHHHHHCCCcEEEEEcC
Confidence 56899999985 32 2234456778889998766654
No 366
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=24.86 E-value=40 Score=33.43 Aligned_cols=31 Identities=26% Similarity=0.506 Sum_probs=23.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
|||++|+. |.+| ..++..|++.||+|+++..
T Consensus 1 m~I~iiG~--------G~mG---~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGA--------GAMG---SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESC--------CHHH---HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECc--------CHHH---HHHHHHHHhCCCeEEEEEc
Confidence 78888873 4444 4567888999999998876
No 367
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=24.85 E-value=49 Score=33.24 Aligned_cols=25 Identities=36% Similarity=0.347 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|++| ..|++.|.++||+|.++...
T Consensus 33 tG~iG---~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 33 TGQDG---SYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 46666 56788899999999988754
No 368
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=24.84 E-value=47 Score=31.80 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=26.3
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 24 ~~k~vlITGa------s~gIG---~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGG------MGGLG---AAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTT------TSHHH---HHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECC------CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 4577777643 57777 57889999999999887644
No 369
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=24.83 E-value=38 Score=32.46 Aligned_cols=25 Identities=24% Similarity=0.262 Sum_probs=20.2
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 36 s~gIG---~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 36 SQRVG---LHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp TSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 57889999999999887654
No 370
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=24.83 E-value=41 Score=33.33 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=18.8
Q ss_pred cccHHHHhhchHHHHHhC--CCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~--Gh~V~vit~~ 127 (612)
+|++| ..|++.|.++ ||+|.++...
T Consensus 13 tG~iG---~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 13 AGFIG---SNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp TSHHH---HHHHHHHHHHCTTCEEEEEECC
T ss_pred ccHHH---HHHHHHHHHhCCCCEEEEEeCC
Confidence 46666 5678888888 8999888643
No 371
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=24.71 E-value=33 Score=34.75 Aligned_cols=43 Identities=14% Similarity=-0.096 Sum_probs=27.6
Q ss_pred CCCceEEEEEecccCccccccHH-HHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~-~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|++|||+++.....+. -.++ .....++++|.+.||+|.++...
T Consensus 1 m~~~~v~vl~gg~s~E---~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAE---HEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSC---HHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCcc---chhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 4579999998532221 1111 22356788999999999998764
No 372
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=24.67 E-value=46 Score=32.43 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=23.3
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
++|||++|+. |.+| ..++..|.+.||+|.++..
T Consensus 3 ~~~~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGL--------GAMG---KPMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECC--------CTTH---HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeC
Confidence 4689999983 4344 3467778899999987644
No 373
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=24.62 E-value=49 Score=31.42 Aligned_cols=25 Identities=28% Similarity=0.497 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 23 s~gIG---~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 23 TDGIG---LAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887644
No 374
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=24.58 E-value=2.1e+02 Score=27.09 Aligned_cols=40 Identities=20% Similarity=0.456 Sum_probs=24.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecC
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~ 128 (612)
.|||++|++.- +-.....+...++.++.-|.+|..+++.+
T Consensus 1 ~mrilvINPnt-----s~~~T~~i~~~~~~~~~p~~~i~~~t~~~ 40 (245)
T 3qvl_A 1 SVRIQVINPNT-----SLAMTETIGAAARAVAAPGTEILAVCPRA 40 (245)
T ss_dssp CEEEEEECSSC-----CHHHHHHHHHHHHHHCCTTEEEEEECCSS
T ss_pred CCEEEEEeCCC-----CHHHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 39999999642 23344445555555555677777777653
No 375
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=24.54 E-value=58 Score=30.71 Aligned_cols=25 Identities=16% Similarity=0.345 Sum_probs=20.1
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 16 s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (249)
T 2ew8_A 16 ANGIG---RAIAERFAVEGADIAIADLV 40 (249)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEcCC
Confidence 57777 56888999999999887644
No 376
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=24.46 E-value=36 Score=33.44 Aligned_cols=33 Identities=18% Similarity=0.338 Sum_probs=24.9
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||.+|+. |-+| ..++..|++.||+|+++...
T Consensus 15 ~~~I~vIG~--------G~mG---~~~A~~l~~~G~~V~~~dr~ 47 (296)
T 3qha_A 15 QLKLGYIGL--------GNMG---APMATRMTEWPGGVTVYDIR 47 (296)
T ss_dssp CCCEEEECC--------STTH---HHHHHHHTTSTTCEEEECSS
T ss_pred CCeEEEECc--------CHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 589999984 3333 35788899999999888544
No 377
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=24.44 E-value=51 Score=32.14 Aligned_cols=25 Identities=20% Similarity=0.213 Sum_probs=19.6
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|++| ..|++.|.++||+|.++...
T Consensus 21 tG~iG---~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 21 AGFVG---KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 46666 56888899999999887644
No 378
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=24.43 E-value=55 Score=31.16 Aligned_cols=41 Identities=15% Similarity=0.075 Sum_probs=29.1
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.++|||+.|...- ..-|-.+...+|+.+|+ +|++|.++=..
T Consensus 24 ~~~~~vI~v~s~k----GGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 24 NKKPKIITIASIK----GGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp --CCEEEEECCSS----SSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred CCCCeEEEEEeCC----CCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 3467877776431 12355678889999999 99999999755
No 379
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=24.37 E-value=1.3e+02 Score=28.14 Aligned_cols=103 Identities=10% Similarity=0.046 Sum_probs=58.0
Q ss_pred EEEEcc-CccccCHHHHHHHHHhcccCCeEEEEEecCC-----hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcc
Q 007212 406 IGFIGR-LEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 406 i~~iGr-l~~~Kg~d~li~A~~~l~~~~~~lvivG~g~-----~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aD 479 (612)
++..+. +....-++.+.++++++.+.+.+++++..+. +.+...+.+.-.+++-.+..+-.++. ..+.+..||
T Consensus 4 lL~S~~~~~~~~~l~~~~~~l~~~~~~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~~d--~~~~l~~ad 81 (229)
T 1fy2_A 4 LLLSNSTLPGKAWLEHALPLIANQLNGRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVAD--PLAAIEKAE 81 (229)
T ss_dssp EEESCSCCTTSCTTTTTHHHHHHHHTTCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSSSC--HHHHHHHCS
T ss_pred EEEcCCCCCCCcHHHHHHHHHHHHhcCCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEecccc--HHHHHhcCC
Confidence 344333 3333334455666666655567888887652 23444444444445532322211121 235688999
Q ss_pred EEEEcCCCC-----------CCcHHHHHHHHcCCceEEcCCCC
Q 007212 480 FILIPSRFE-----------PCGLIQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 480 v~v~pS~~E-----------~~gl~~lEAma~G~PvI~s~~gg 511 (612)
.+++|- -+ ++--.+-|+...|+|++.+..|.
T Consensus 82 ~I~lpG-G~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~sAG~ 123 (229)
T 1fy2_A 82 IIIVGG-GNTFQLLKESRERGLLAPMADRVKRGALYIGWSAGA 123 (229)
T ss_dssp EEEECC-SCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEETHHH
T ss_pred EEEECC-CcHHHHHHHHHHCChHHHHHHHHHcCCEEEEECHHH
Confidence 999997 22 22334667778999999888653
No 380
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=24.24 E-value=59 Score=31.32 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=23.8
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 30 k~vlVTGa------s~gIG---~aia~~L~~~G~~V~~~~r~ 62 (276)
T 2b4q_A 30 RIALVTGG------SRGIG---QMIAQGLLEAGARVFICARD 62 (276)
T ss_dssp CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEeCC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 55566532 57777 56888999999998877543
No 381
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=24.22 E-value=4.2e+02 Score=24.30 Aligned_cols=109 Identities=12% Similarity=0.106 Sum_probs=64.2
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--HhccEEEEcCCC-CCCcHHHHHHHHc---CCceE
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY---GTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~aDv~v~pS~~-E~~gl~~lEAma~---G~PvI 505 (612)
..+++|+.+.+ .....+..+-...+-.+. ..-+...+-..+ ...|++++-... +.-|+.+++.+.. .+|+|
T Consensus 23 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii 99 (250)
T 3r0j_A 23 EARVLVVDDEA-NIVELLSVSLKFQGFEVY--TATNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPAL 99 (250)
T ss_dssp SCEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEE
T ss_pred CceEEEEECCH-HHHHHHHHHHHHCCCEEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 45666766543 334444444444432232 223444443333 346888876554 4457777777653 56776
Q ss_pred EcC-CCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 506 VAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+-. ... ..+.++.|..+|+. .|.+.++|...|..++..
T Consensus 100 ~lt~~~~~~~~~~~~~~Ga~~yl~----------Kp~~~~~L~~~i~~~~~~ 141 (250)
T 3r0j_A 100 FLTARDSLQDKIAGLTLGGDDYVT----------KPFSLEEVVARLRVILRR 141 (250)
T ss_dssp EEECSTTHHHHHHHHTSTTCEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHcCCcEEEe----------CCCCHHHHHHHHHHHHHh
Confidence 443 322 22345567888976 899999999999998863
No 382
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=24.17 E-value=2.9e+02 Score=25.45 Aligned_cols=35 Identities=9% Similarity=0.068 Sum_probs=20.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC--CCeEEEEEecC
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRY 128 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~--Gh~V~vit~~~ 128 (612)
|||+++.+. +| ..+..|..++.+. +++|..+.++.
T Consensus 1 ~riaVl~SG-------~G--s~L~aLi~~~~~~~~~~~I~~Vvs~~ 37 (209)
T 1meo_A 1 ARVAVLISG-------TG--SNLQALIDSTREPNSSAQIDIVISNK 37 (209)
T ss_dssp CEEEEEESS-------SC--TTHHHHHHHHHSTTCSCEEEEEEESS
T ss_pred CeEEEEEEC-------Cc--hHHHHHHHHHhcCCCCcEEEEEEeCC
Confidence 577777642 12 2455566655553 78987776653
No 383
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=24.10 E-value=2.9e+02 Score=25.55 Aligned_cols=37 Identities=14% Similarity=0.108 Sum_probs=23.2
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCC--CeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G--h~V~vit~~ 127 (612)
|+++||+++.+- .+..+..|..++.+.+ ++|..+.++
T Consensus 5 m~~~ri~vl~SG---------~gsnl~all~~~~~~~l~~~I~~Visn 43 (209)
T 4ds3_A 5 MKRNRVVIFISG---------GGSNMEALIRAAQAPGFPAEIVAVFSD 43 (209)
T ss_dssp -CCEEEEEEESS---------CCHHHHHHHHHHTSTTCSEEEEEEEES
T ss_pred CCCccEEEEEEC---------CcHHHHHHHHHHHcCCCCcEEEEEEEC
Confidence 557899888642 2335677777776543 677766654
No 384
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=24.07 E-value=67 Score=30.52 Aligned_cols=25 Identities=24% Similarity=0.373 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 30 s~gIG---~aia~~l~~~G~~V~~~~r~ 54 (253)
T 2nm0_A 30 NRGIG---LAIARAFADAGDKVAITYRS 54 (253)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56889999999999877644
No 385
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=24.01 E-value=78 Score=30.90 Aligned_cols=41 Identities=22% Similarity=0.312 Sum_probs=31.9
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|++.|+.. .| .-|-..+..+||..|++.|.+|.+|-..
T Consensus 90 ~~~kvI~vts~-kg---G~GKTtva~nLA~~lA~~G~rVLLID~D 130 (286)
T 3la6_A 90 AQNNVLMMTGV-SP---SIGMTFVCANLAAVISQTNKRVLLIDCD 130 (286)
T ss_dssp TTCCEEEEEES-SS---SSSHHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred CCCeEEEEECC-CC---CCcHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 35677777764 12 4577888899999999999999999654
No 386
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=23.90 E-value=66 Score=30.06 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 11 sggiG---~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 11 SSGNG---LAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887644
No 387
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=23.88 E-value=54 Score=30.76 Aligned_cols=25 Identities=32% Similarity=0.446 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 14 s~gIG---~~~a~~l~~~G~~v~~~~r~ 38 (247)
T 3lyl_A 14 SRGIG---FEVAHALASKGATVVGTATS 38 (247)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 57889999999999777654
No 388
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=23.85 E-value=2.7e+02 Score=22.00 Aligned_cols=109 Identities=13% Similarity=0.201 Sum_probs=63.7
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCC-ceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc-----CC
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GT 502 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~ 502 (612)
..+++|+.+.+ ...+.+..+-...+- .+.. .-+.......+. ..|++++-... +.-|+.+++.+.. .+
T Consensus 4 ~~~ilivdd~~-~~~~~l~~~l~~~~~~~v~~--~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~ 80 (128)
T 1jbe_A 4 ELKFLVVDDFS-TMRRIVRNLLKELGFNNVEE--AEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSAL 80 (128)
T ss_dssp TCCEEEECSCH-HHHHHHHHHHHHTTCCCEEE--ESSHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTC
T ss_pred ccEEEEECCCH-HHHHHHHHHHHHcCCcEEEe--eCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCC
Confidence 35666776543 344455555444432 2221 123344333433 35888876554 3457778888764 46
Q ss_pred ceEEc-CCCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 503 VPIVA-STGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 503 PvI~s-~~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|+|.- .... ..+.++.|..+++. .|-+.+++.+.|.+++..
T Consensus 81 ~ii~~s~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~l~~~i~~~~~~ 125 (128)
T 1jbe_A 81 PVLMVTAEAKKENIIAAAQAGASGYVV----------KPFTAATLEEKLNKIFEK 125 (128)
T ss_dssp CEEEEESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred cEEEEecCccHHHHHHHHHhCcCceee----------cCCCHHHHHHHHHHHHHH
Confidence 66543 3222 23344567788876 899999999999887753
No 389
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=23.80 E-value=50 Score=31.10 Aligned_cols=25 Identities=24% Similarity=0.412 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 15 s~gIG---~~ia~~l~~~G~~V~~~~r~ 39 (246)
T 2ag5_A 15 AQGIG---QAAALAFAREGAKVIATDIN 39 (246)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 57777 57888999999999887643
No 390
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=23.73 E-value=53 Score=31.16 Aligned_cols=35 Identities=26% Similarity=0.324 Sum_probs=25.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCC---CeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG---HRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G---h~V~vit~~ 127 (612)
.||.++|+.- .||+| ..+++.|+++| ++|.++...
T Consensus 20 ~~k~vlITGa------sggIG---~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 20 HMNSILITGC------NRGLG---LGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp CCSEEEESCC------SSHHH---HHHHHHHHTSSSCCSEEEEEESC
T ss_pred CCCEEEEECC------CCcHH---HHHHHHHHhcCCCCcEEEEEecC
Confidence 4555566532 57777 57899999999 999888754
No 391
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=23.73 E-value=70 Score=30.55 Aligned_cols=25 Identities=28% Similarity=0.388 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 43 sggIG---~~la~~L~~~G~~V~~~~r~ 67 (279)
T 3ctm_A 43 SGGIG---WAVAEAYAQAGADVAIWYNS 67 (279)
T ss_dssp TSSHH---HHHHHHHHHHTCEEEEEESS
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 46888899999999887644
No 392
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=23.62 E-value=80 Score=30.69 Aligned_cols=40 Identities=13% Similarity=0.028 Sum_probs=27.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCC
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~ 129 (612)
+|+||+|++. |+.- ...++.+...++++|++|+|++...+
T Consensus 7 ~~rvLvv~aH--PDDe----~lg~GGtia~~~~~G~~V~vv~~T~G 46 (273)
T 3dff_A 7 ATRLLAISPH--LDDA----VLSFGAGLAQAAQDGANVLVYTVFAG 46 (273)
T ss_dssp -CEEEEEESS--TTHH----HHHHHHHHHHHHHTTCEEEEEETTCC
T ss_pred CCCEEEEEeC--CChH----HHhHHHHHHHHHHCCCcEEEEEEeCC
Confidence 6899999984 6532 33344566667889999999985533
No 393
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=23.59 E-value=55 Score=31.66 Aligned_cols=35 Identities=20% Similarity=0.179 Sum_probs=25.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 11 ~~k~vlITGa------s~GIG---~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGG------NKGIG---FEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSC------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3466677643 57877 57889999999999887654
No 394
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=23.49 E-value=1.6e+02 Score=26.46 Aligned_cols=136 Identities=12% Similarity=0.037 Sum_probs=71.4
Q ss_pred cEEEEEccCc---cccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEec-cChHHHH-------
Q 007212 404 PVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK-FNIPLAH------- 472 (612)
Q Consensus 404 ~~i~~iGrl~---~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~-~~~~~~~------- 472 (612)
+.|..+|.=. ...+.+..-+..+.|.+.++.++ .|.+....+....+-+.+.+..+..+.. ++.+..+
T Consensus 14 ~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lV-sGGg~~Gim~aa~~gAl~~gG~tigVlP~~~~~~~~~~~~~~i 92 (176)
T 2iz6_A 14 PIIGVMGPGKADTAENQLVMANELGKQIATHGWILL-TGGRSLGVMHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPI 92 (176)
T ss_dssp CEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEE-EECSSSSHHHHHHHHHHHTTCCEEEEECC-----CCTTCSEEE
T ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEE-ECCCccCHhHHHHHHHHHcCCEEEEEeCchhhhhhccCCceeE
Confidence 3444455322 23344444444445544676665 4545334666666666665555554432 1111111
Q ss_pred ----------HHHHhccEEEEcCCCCCCcH--HHHHHHHcCCceEEcCCCCcc-cceecC-cceEEecccccccccCCCC
Q 007212 473 ----------MIIAGADFILIPSRFEPCGL--IQLHAMRYGTVPIVASTGGLV-DTVEEG-FTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 473 ----------~i~~~aDv~v~pS~~E~~gl--~~lEAma~G~PvI~s~~gg~~-e~v~~g-~~G~~~~~~~~~~~~v~~~ 538 (612)
.+...+|.+|+-.- ++|. .+.||+..++||++-+..+.. .++.+. ...+. ..+
T Consensus 93 ~~~~~~~Rk~~m~~~sda~IvlpG--g~GTL~E~~~al~~~kpV~~l~~~~~~~gfi~~~~~~~i~-----------~~~ 159 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNVLVAVGM--GPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVH-----------VAA 159 (176)
T ss_dssp ECCCCSSSCCCCGGGCSEEEEESC--CHHHHHHHHHHHHTTCCEEEESCCHHHHHHHHHHCTTTEE-----------EES
T ss_pred EcCCHHHHHHHHHHhCCEEEEecC--CccHHHHHHHHHHhCCcEEEEcCcccccccCChhhcCeEE-----------EcC
Confidence 13456676654321 3454 388999999999988752211 122211 12222 457
Q ss_pred CHHHHHHHHHHHHHh
Q 007212 539 DVAAVSTTVRRALAT 553 (612)
Q Consensus 539 d~~~la~~i~~ll~~ 553 (612)
|++++.+.+.+.+..
T Consensus 160 ~~~e~~~~l~~~~~~ 174 (176)
T 2iz6_A 160 DVAGAIAAVKQLLAK 174 (176)
T ss_dssp SHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHh
Confidence 899999988877653
No 395
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=23.48 E-value=45 Score=31.53 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=19.6
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++|++|.++..
T Consensus 16 sggiG---~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 16 STGLG---KSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CChHH---HHHHHHHHHCCCEEEEEcC
Confidence 57777 5788899999999988765
No 396
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=23.45 E-value=44 Score=33.26 Aligned_cols=32 Identities=25% Similarity=0.438 Sum_probs=22.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC-CCeEEEEEe
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vit~ 126 (612)
|||++.+. +|++| ..|++.|.+. ||+|.++..
T Consensus 1 MkvlVTGa-------sG~iG---~~l~~~L~~~~g~~V~~~~r 33 (361)
T 1kew_A 1 MKILITGG-------AGFIG---SAVVRHIIKNTQDTVVNIDK 33 (361)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHHHHCSCEEEEEEC
T ss_pred CEEEEECC-------CchHh---HHHHHHHHhcCCCeEEEEec
Confidence 77666553 46666 5677788887 899988764
No 397
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=23.44 E-value=1.9e+02 Score=25.11 Aligned_cols=51 Identities=24% Similarity=0.270 Sum_probs=35.9
Q ss_pred CCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 501 GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 501 G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
.+-+-++.-||++.+.-.|. +-+. ....|.++++|.|++.|.+.|..++++
T Consensus 66 ~~eveg~sGgGlVkVtvnG~-~ev~-~I~Idp~lldpeD~E~LeDLI~aAvNd 116 (143)
T 1ybx_A 66 EKTVEASAGGGAVTVVATGR-KDIK-EITIKPEVVDPDDVEMLQDLILAAVNE 116 (143)
T ss_dssp HCEEEEEETTTTEEEEEETT-CCEE-EEEECGGGCCTTCHHHHHHHHHHHHHH
T ss_pred cCEEEEEECCCEEEEEEecC-ceEE-EEEECHHHcCCcCHHHHHHHHHHHHHH
Confidence 34466667777777776653 2221 334477788999999999999998886
No 398
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=23.36 E-value=50 Score=36.70 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=25.0
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|+|++.+. +|++| ..|++.|.++||+|.++...
T Consensus 10 ~~~~ilVTGa-------tG~IG---~~l~~~L~~~G~~V~~~~r~ 44 (699)
T 1z45_A 10 TSKIVLVTGG-------AGYIG---SHTVVELIENGYDCVVADNL 44 (699)
T ss_dssp -CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEECC-------CCHHH---HHHHHHHHHCcCEEEEEECC
Confidence 4567766553 46666 56888899999999888643
No 399
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=23.32 E-value=56 Score=34.68 Aligned_cols=33 Identities=27% Similarity=0.474 Sum_probs=24.9
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |-+| ..++..|++.||+|+++-..
T Consensus 8 ~~~I~VIG~--------G~vG---~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 8 SMNLTIIGS--------GSVG---LVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CceEEEECc--------CHHH---HHHHHHHHhCCCEEEEEECC
Confidence 599999984 3333 35778899999999888543
No 400
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=23.32 E-value=84 Score=28.77 Aligned_cols=25 Identities=24% Similarity=0.064 Sum_probs=21.6
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEE
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vi 124 (612)
.-|-...+.+|+.+|+++|++|.++
T Consensus 12 GvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 12 EVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp TSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3567788899999999999999886
No 401
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=23.30 E-value=49 Score=31.90 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=24.7
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 22 k~vlVTGa------s~gIG---~aia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGA------TSGFG---EACARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESST------TTSSH---HHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 66666643 57777 56888999999999887644
No 402
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=23.30 E-value=35 Score=32.92 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=24.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.|||++++. +|++| ..|++.|.++||+|.++..
T Consensus 12 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r 44 (292)
T 1vl0_A 12 HMKILITGA-------NGQLG---REIQKQLKGKNVEVIPTDV 44 (292)
T ss_dssp CEEEEEEST-------TSHHH---HHHHHHHTTSSEEEEEECT
T ss_pred cceEEEECC-------CChHH---HHHHHHHHhCCCeEEeccC
Confidence 588877664 46666 5678889999999988753
No 403
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=23.28 E-value=69 Score=30.19 Aligned_cols=40 Identities=8% Similarity=-0.005 Sum_probs=29.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC-CCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~ 127 (612)
|||++|... |. +.|-...++..++..+.+. |++|.++...
T Consensus 2 mkIliI~gS--~r-~~s~T~~la~~i~~~l~~~~g~~v~~~dl~ 42 (242)
T 1sqs_A 2 NKIFIYAGV--RN-HNSKTLEYTKRLSSIISSRNNVDISFRTPF 42 (242)
T ss_dssp CEEEEEECC--CC-TTCHHHHHHHHHHHHHHHHSCCEEEEECTT
T ss_pred CeEEEEECC--CC-CCChHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 799999874 53 2355666667778888887 9999888644
No 404
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=23.28 E-value=50 Score=33.47 Aligned_cols=37 Identities=16% Similarity=0.273 Sum_probs=27.7
Q ss_pred ceEEEEEecccCccccccH--HHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGL--GDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~--~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+-|... .||+ .+.+.+||.+|+++|++|.+|=..
T Consensus 1 MkvIav~s~------KGGvGKTT~a~nLA~~LA~~G~rVLlID~D 39 (361)
T 3pg5_A 1 MRTISFFNN------KGGVGKTTLSTNVAHYFALQGKRVLYVDCD 39 (361)
T ss_dssp CEEEEBCCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcC------CCCCcHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 777666643 4544 456677999999999999999654
No 405
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=23.23 E-value=46 Score=31.67 Aligned_cols=34 Identities=15% Similarity=0.328 Sum_probs=24.2
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+.|||.+|+. |.++ ..++..|.+.||+|.++...
T Consensus 2 ~~m~i~iiG~--------G~mG---~~~a~~l~~~g~~v~~~~~~ 35 (259)
T 2ahr_A 2 NAMKIGIIGV--------GKMA---SAIIKGLKQTPHELIISGSS 35 (259)
T ss_dssp -CCEEEEECC--------SHHH---HHHHHHHTTSSCEEEEECSS
T ss_pred CccEEEEECC--------CHHH---HHHHHHHHhCCCeEEEECCC
Confidence 3589999983 4444 45677889999998776543
No 406
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=23.16 E-value=5.4e+02 Score=25.26 Aligned_cols=132 Identities=11% Similarity=0.091 Sum_probs=78.9
Q ss_pred HhhCCEEEe--cCHHHHHHHHcCcCCCccchhhhhccCeEEeeCCccCCCcCCCcccccccccCcchhhhccHHHHHHHH
Q 007212 315 ILESDMVLT--VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 315 l~~ad~vi~--vS~~~~~~l~~~~~~G~~~~~~~~~~~i~vI~ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~ 392 (612)
-..+|.++. ......+++.+. - .+. |.|+.| ....|... -.+--.++
T Consensus 89 s~~~D~iviR~~~~~~~~~lA~~--~-----------~vP-VINag~-~~~HPtQa----------------LaDl~Ti~ 137 (307)
T 3tpf_A 89 GAMVDFVMMRVNKHETLLEFARY--S-----------KAP-VINALS-ELYHPTQV----------------LGDLFTIK 137 (307)
T ss_dssp HHHSSEEEEECSCHHHHHHHHHH--C-----------SSC-EEEEEC-SSCCHHHH----------------HHHHHHHH
T ss_pred HHhCCEEEEecCChHHHHHHHHh--C-----------CCC-EEeCCC-CCcCcHHH----------------HHHHHHHH
Confidence 345898877 445556666541 1 333 557777 46777531 12234566
Q ss_pred HHhCCCCCCC-CcEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCC----hhHHHHHHHHHHHCCCceEEEeccC
Q 007212 393 AEVGLPVDRN-IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 393 ~~~gl~~~~~-~~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~v~~~~~~~ 467 (612)
+.+|-- + ...|.|+|-. ..=...++.++..+ ++++.+++... +.+.+..++.+.+.+..+... .+
T Consensus 138 e~~g~l---~~gl~va~vGD~--~~va~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~~~~~--~d 207 (307)
T 3tpf_A 138 EWNKMQ---NGIAKVAFIGDS--NNMCNSWLITAAIL---GFEISIAMPKNYKISPEIWEFAMKQALISGAKISLG--YD 207 (307)
T ss_dssp HTTCCG---GGCCEEEEESCS--SHHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCEEEEE--SC
T ss_pred HHhCCC---CCCCEEEEEcCC--CccHHHHHHHHHHc---CCEEEEECCCccCCCHHHHHHHHHHHHHcCCeEEEE--cC
Confidence 777632 2 3689999973 33457788888887 78999999743 234455555555655444332 22
Q ss_pred hHHHHHHHHhccEEEEcCCCCCCc
Q 007212 468 IPLAHMIIAGADFILIPSRFEPCG 491 (612)
Q Consensus 468 ~~~~~~i~~~aDv~v~pS~~E~~g 491 (612)
. .+.+..||++.... |..+|
T Consensus 208 ~---~eav~~aDvvyt~~-w~smg 227 (307)
T 3tpf_A 208 K---FEALKDKDVVITDT-WVSMG 227 (307)
T ss_dssp H---HHHHTTCSEEEECC-SSCTT
T ss_pred H---HHHhcCCCEEEecC-cccCC
Confidence 2 24689999987654 44444
No 407
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=23.16 E-value=67 Score=26.89 Aligned_cols=40 Identities=10% Similarity=-0.070 Sum_probs=29.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCC--CeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G--h~V~vit~~ 127 (612)
.||++||.....|. . .......+|..+.++| |+|.|+--.
T Consensus 7 ~~K~~ivi~s~d~~---~-~~~~al~~A~~a~~~G~~~eV~i~~~G 48 (117)
T 2fb6_A 7 NDKLTILWTTDNKD---T-VFNMLAMYALNSKNRGWWKHINIILWG 48 (117)
T ss_dssp TSEEEEEECCCCHH---H-HHHTHHHHHHHHHHHTSCSEEEEEECS
T ss_pred CCeEEEEEEcCChH---H-HHHHHHHHHHHHHHcCCCCcEEEEEEC
Confidence 49999998774332 1 2245778888899999 899999865
No 408
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=23.11 E-value=62 Score=30.39 Aligned_cols=24 Identities=25% Similarity=0.408 Sum_probs=19.6
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++|++|.++..
T Consensus 13 s~giG---~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 13 SRGIG---RAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 57777 5688899999999988765
No 409
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=23.11 E-value=64 Score=30.69 Aligned_cols=25 Identities=20% Similarity=0.295 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 16 GGNIG---LATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887643
No 410
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=23.10 E-value=2.9e+02 Score=22.00 Aligned_cols=109 Identities=17% Similarity=0.160 Sum_probs=63.1
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--HhccEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY-----GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 503 (612)
..+++|+.+.. .....+.++-.+.+-.+. ..-+...+...+ ...|++++-... +.-|+.+++.+.. ..|
T Consensus 6 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ 82 (132)
T 3lte_A 6 SKRILVVDDDQ-AMAAAIERVLKRDHWQVE--IAHNGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPK 82 (132)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCE
T ss_pred CccEEEEECCH-HHHHHHHHHHHHCCcEEE--EeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCe
Confidence 45667776543 344455555444442232 222444443333 346888876654 4467788887763 244
Q ss_pred eEEcCCCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 504 PIVASTGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+|.+.... ..+.++.|..+++. .|.+.++|.+.|.+....
T Consensus 83 ii~~~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 125 (132)
T 3lte_A 83 ILVVSGLDKAKLQQAVTEGADDYLE----------KPFDNDALLDRIHDLVNE 125 (132)
T ss_dssp EEEECCSCSHHHHHHHHHTCCEEEC----------SSCCHHHHHHHHHHHHC-
T ss_pred EEEEeCCChHHHHHHHHhChHHHhh----------CCCCHHHHHHHHHHHcCC
Confidence 44443322 22344567888875 899999999999888764
No 411
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=23.09 E-value=67 Score=30.35 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=24.1
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 23 k~vlITGa------s~gIG---~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 23 KNILVLGG------SGALG---AEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45555532 57777 57889999999998877654
No 412
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=23.07 E-value=64 Score=30.61 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=24.1
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 8 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 8 KLAVVTAG------SSGLG---FASALELARNGARLLLFSRN 40 (260)
T ss_dssp CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 55566532 57777 57888999999999887643
No 413
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=22.93 E-value=41 Score=30.93 Aligned_cols=38 Identities=13% Similarity=0.052 Sum_probs=27.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++|... |. .++ +.+...+++++.+.|++|.++--.
T Consensus 2 mkiLiI~gs--p~--~~~-s~l~~~l~~~~~~~g~ev~~~dL~ 39 (192)
T 3f2v_A 2 PKTLIILAH--PN--ISQ-STVHKHWSDAVRQHTDRFTVHELY 39 (192)
T ss_dssp CCEEEEECC--TT--GGG-CSHHHHHHHHHTTCTTTEEEEEHH
T ss_pred CEEEEEEeC--CC--ccH-HHHHHHHHHHHHhCCCeEEEEEch
Confidence 899999875 54 222 356677788888889999888643
No 414
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=22.92 E-value=3.5e+02 Score=24.91 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=22.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC--CCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~--Gh~V~vit~~ 127 (612)
|||+++... + +.....+.+++.+. +|+|..+.++
T Consensus 4 ~ki~vl~sG------~---g~~~~~~l~~l~~~~l~~~I~~Vit~ 39 (212)
T 3av3_A 4 KRLAVFASG------S---GTNFQAIVDAAKRGDLPARVALLVCD 39 (212)
T ss_dssp EEEEEECCS------S---CHHHHHHHHHHHTTCCCEEEEEEEES
T ss_pred cEEEEEEEC------C---cHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 688777632 1 23566777888876 6888766654
No 415
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=22.83 E-value=46 Score=31.90 Aligned_cols=24 Identities=21% Similarity=0.311 Sum_probs=19.7
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++|++|.++..
T Consensus 20 s~gIG---~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 20 ARRIG---HSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 57777 5688899999999988765
No 416
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=22.73 E-value=93 Score=30.13 Aligned_cols=40 Identities=13% Similarity=0.024 Sum_probs=28.3
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEecCC
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~~~ 129 (612)
+|+||+|++. |+.- ...++.+...++++|++|+|++-..+
T Consensus 7 ~~rvLvv~aH--PDDe----~l~~GGtia~~~~~G~~V~vv~~T~G 46 (270)
T 3dfi_A 7 RTRILAISPH--LDDA----VLSVGASLAQAEQDGGKVTVFTVFAG 46 (270)
T ss_dssp CSEEEEEESS--TTHH----HHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCCEEEEEeC--CchH----HHhhHHHHHHHHhCCCeEEEEEEeCC
Confidence 6899999984 6532 33344566667889999999985533
No 417
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=22.65 E-value=67 Score=30.32 Aligned_cols=33 Identities=24% Similarity=0.455 Sum_probs=24.4
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 10 k~~lVTGa------s~gIG---~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 10 KVALVTGA------SRGIG---KAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp CEEEESSC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 56666632 57777 57889999999999777543
No 418
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=22.64 E-value=78 Score=28.44 Aligned_cols=41 Identities=5% Similarity=-0.006 Sum_probs=28.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCC--CeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~G--h~V~vit~~ 127 (612)
|||++|... |....|-...++..++..+.+.| ++|.++-..
T Consensus 2 mkilii~~S--~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 2 SKVLVLKSS--ILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CEEEEEECC--SSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CeEEEEEeC--CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 799999865 53112445556666788888876 899888754
No 419
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=22.63 E-value=65 Score=30.24 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=25.6
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
..|+++|+.- .+|+| ..+++.|+++|++|.++..+
T Consensus 6 ~~k~vlITGa------s~gIG---~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 6 KGKVALVTGA------SRGIG---RAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TTCEEEETTC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEECC------CChHH---HHHHHHHHHCCCeEEEEeCC
Confidence 3466666632 57777 57889999999999887654
No 420
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=22.63 E-value=63 Score=29.52 Aligned_cols=38 Identities=26% Similarity=0.384 Sum_probs=24.2
Q ss_pred ceEEEEEecccCccccccHH-HHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~-~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++|... |. .++.. ..+..+.+.+ +.|++|.++-..
T Consensus 1 MkiLiI~gs--pr--~~s~t~~l~~~~~~~~-~~g~~v~~~dL~ 39 (196)
T 3lcm_A 1 MKILIVYTH--PN--PTSFNAEILKQVQTNL-SKEHTVSTLDLY 39 (196)
T ss_dssp CEEEEEECC--SC--TTSHHHHHHHHHHHHS-CTTSEEEEEETT
T ss_pred CEEEEEEeC--CC--CCChHHHHHHHHHHHh-cCCCeEEEEEcc
Confidence 899999875 53 34432 2333344444 579999988754
No 421
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=22.61 E-value=55 Score=31.81 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=22.8
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |.+| ..++..|.+.||+|.++...
T Consensus 5 ~m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~~~ 37 (299)
T 1vpd_A 5 TMKVGFIGL--------GIMG---KPMSKNLLKAGYSLVVSDRN 37 (299)
T ss_dssp -CEEEEECC--------STTH---HHHHHHHHHTTCEEEEECSC
T ss_pred cceEEEECc--------hHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 489999983 3333 34677788999999776543
No 422
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=22.57 E-value=61 Score=32.98 Aligned_cols=43 Identities=7% Similarity=0.002 Sum_probs=27.5
Q ss_pred CCCceEEEEEecccCccccccHH-HHhhchHHHH-HhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLG-DVLGGLPPAL-AANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~-~~~~~L~~~L-~~~Gh~V~vit~~ 127 (612)
|++|||+++..-... .-.++ .....++++| .+.||+|..+-..
T Consensus 1 m~k~~v~vl~gG~s~---E~~vSl~s~~~v~~al~~~~g~~v~~i~~~ 45 (377)
T 1ehi_A 1 MTKKRVALIFGGNSS---EHDVSKRSAQNFYNAIEATGKYEIIVFAIA 45 (377)
T ss_dssp --CEEEEEEEECSST---THHHHHHHHHHHHHHHHHHSSEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCC---CcceeHHHHHHHHHHhCcccCcEEEEEEEc
Confidence 457999999853211 11111 1246688999 9999999998754
No 423
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=22.56 E-value=60 Score=31.96 Aligned_cols=33 Identities=21% Similarity=0.415 Sum_probs=25.0
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+.|||.||+. |-+| ..++..|++.||+|+++-.
T Consensus 8 ~~~~IgiIG~--------G~mG---~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGL--------GAMG---TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECC--------SHHH---HHHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEECC--------CHHH---HHHHHHHHHCCCEEEEEeC
Confidence 4689999973 4344 5688889999999988744
No 424
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=22.49 E-value=39 Score=32.75 Aligned_cols=25 Identities=20% Similarity=0.270 Sum_probs=20.1
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 32 s~gIG---~aia~~L~~~G~~V~~~~r~ 56 (288)
T 2x9g_A 32 AKRIG---RAIAVKLHQTGYRVVIHYHN 56 (288)
T ss_dssp SSHHH---HHHHHHHHHHTCEEEEEESS
T ss_pred CCHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 57777 56888899999999887654
No 425
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=22.39 E-value=53 Score=31.96 Aligned_cols=35 Identities=29% Similarity=0.367 Sum_probs=25.7
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCC---eEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH---RVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh---~V~vit~~ 127 (612)
|+.|||.||+. |- +-..++..|.+.|| +|.++.+.
T Consensus 1 M~~~~I~iIG~--------G~---mG~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 1 MNTSNITFIGG--------GN---MARNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp -CCSCEEEESC--------SH---HHHHHHHHHHHTTCCGGGEEEECSS
T ss_pred CCCCEEEEEcc--------cH---HHHHHHHHHHHCCCCCCeEEEEeCC
Confidence 45699999873 33 33568889999999 88887655
No 426
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=22.38 E-value=51 Score=35.03 Aligned_cols=36 Identities=19% Similarity=0.172 Sum_probs=25.7
Q ss_pred cCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
-|.+|||.+|+. |-.| ..|+..|++.||+|.++...
T Consensus 12 ~~~~~~IgvIGl--------G~MG---~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 12 HMSKQQIGVVGM--------AVMG---RNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp ---CBSEEEECC--------SHHH---HHHHHHHHTTTCCEEEECSS
T ss_pred ccCCCeEEEEcc--------HHHH---HHHHHHHHhCCCeEEEEeCC
Confidence 366899999873 4344 56888999999999887544
No 427
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=22.34 E-value=80 Score=30.13 Aligned_cols=44 Identities=18% Similarity=0.104 Sum_probs=26.9
Q ss_pred CceEEEEEeccc-Cc---c-ccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVA-PW---S-KTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~-P~---~-~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.+||++|.+.+. +. . ++|=-..=+..-...|.+.|++|+++++.
T Consensus 3 m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 3 PKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 468999987641 11 0 12222222333456788899999999987
No 428
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=22.29 E-value=81 Score=29.58 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=25.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 9 ~k~vlITGa------s~giG---~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 9 NKVGIVTGS------GGGIG---QAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TCEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC------CChHH---HHHHHHHHHCCCEEEEEcCC
Confidence 466666632 57777 57899999999998887644
No 429
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=22.24 E-value=1.8e+02 Score=28.14 Aligned_cols=91 Identities=16% Similarity=0.109 Sum_probs=54.5
Q ss_pred cEEEEEccCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~i~~iGrl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
..|+++|-= .-|...+++++.+. ++++++-+-+.+ .+..++++.+++... +.. ..++++.+|++++
T Consensus 7 ~~igiIG~G--~~g~~~~~~~l~~~--~~~~l~av~d~~---~~~~~~~a~~~~~~~-----~~~--~~~ll~~~D~V~i 72 (308)
T 3uuw_A 7 IKMGMIGLG--SIAQKAYLPILTKS--ERFEFVGAFTPN---KVKREKICSDYRIMP-----FDS--IESLAKKCDCIFL 72 (308)
T ss_dssp CEEEEECCS--HHHHHHTHHHHTSC--SSSEEEEEECSC---HHHHHHHHHHHTCCB-----CSC--HHHHHTTCSEEEE
T ss_pred CcEEEEecC--HHHHHHHHHHHHhC--CCeEEEEEECCC---HHHHHHHHHHcCCCC-----cCC--HHHHHhcCCEEEE
Confidence 567777751 11222345555443 678888555544 233455555554211 222 2245669999998
Q ss_pred cCCCCCCcHHHHHHHHcCCceEEcC
Q 007212 484 PSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.+-...-.-.+.+|+..|++|++-.
T Consensus 73 ~tp~~~h~~~~~~al~~gk~vl~EK 97 (308)
T 3uuw_A 73 HSSTETHYEIIKILLNLGVHVYVDK 97 (308)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEECS
T ss_pred eCCcHhHHHHHHHHHHCCCcEEEcC
Confidence 8775544556778999999999865
No 430
>2kyr_A Fructose-like phosphotransferase enzyme IIB compo; ALP protein, structural genomics, PSI-2; NMR {Escherichia coli}
Probab=22.22 E-value=1.2e+02 Score=25.26 Aligned_cols=39 Identities=15% Similarity=0.149 Sum_probs=27.2
Q ss_pred CceEEEEEecccCccccccHHHHhh--chHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLG--GLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~--~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||+.|+.. | +|=.-.|+. .|-++-.++||++.|=|-.
T Consensus 5 ~mkIvaVTaC--p---tGiAHTyMAAeaL~~aA~~~G~~ikVEtqG 45 (111)
T 2kyr_A 5 SKKLIALCAC--P---MGLAHTFMAAQALEEAAVEAGYEVKIETQG 45 (111)
T ss_dssp CCEEEEEEEE--S---SCHHHHHHHHHHHHHHHHHTSSEEEEEEEE
T ss_pred cccEEEEEcC--C---CcHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 5999999985 5 454444432 2555666889999998754
No 431
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=22.13 E-value=82 Score=29.79 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=25.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 7 ~k~vlVTGa------s~GIG---~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 7 NATVAVIGA------GDYIG---AEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp SCEEEEECC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 456666632 57777 57889999999999887654
No 432
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=22.03 E-value=75 Score=30.43 Aligned_cols=25 Identities=32% Similarity=0.440 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 30 s~gIG---~aia~~l~~~G~~V~~~~r~ 54 (273)
T 1ae1_A 30 SKGIG---YAIVEELAGLGARVYTCSRN 54 (273)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred cchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887644
No 433
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=21.93 E-value=86 Score=29.97 Aligned_cols=24 Identities=8% Similarity=0.079 Sum_probs=19.7
Q ss_pred ccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 101 GGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 101 GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||+| ..+++.|+++|++|.++...
T Consensus 18 ~gIG---~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 18 KSIA---YGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp TSHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 7888 56888999999999887654
No 434
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=21.88 E-value=45 Score=34.39 Aligned_cols=34 Identities=35% Similarity=0.364 Sum_probs=25.0
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|+|++.+. +|++| ..|+++|.+.|++|.++...
T Consensus 69 ~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 102 (427)
T 4f6c_A 69 LGNTLLTGA-------TGFLG---AYLIEALQGYSHRIYCFIRA 102 (427)
T ss_dssp CEEEEEECT-------TSHHH---HHHHHHHTTTEEEEEEEEEC
T ss_pred CCEEEEecC-------CcHHH---HHHHHHHHcCCCEEEEEECC
Confidence 456665543 57777 56888899999999998765
No 435
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=21.85 E-value=61 Score=31.14 Aligned_cols=32 Identities=28% Similarity=0.509 Sum_probs=23.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++|+. |.+| ..++..|.+.||+|.++...
T Consensus 1 m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~~~ 32 (279)
T 2f1k_A 1 MKIGVVGL--------GLIG---ASLAGDLRRRGHYLIGVSRQ 32 (279)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEEcC--------cHHH---HHHHHHHHHCCCEEEEEECC
Confidence 78888872 4444 45788899999998887543
No 436
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=21.83 E-value=51 Score=32.61 Aligned_cols=33 Identities=15% Similarity=0.345 Sum_probs=24.0
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCC-eEEEEEe
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH-RVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh-~V~vit~ 126 (612)
..|||.||+. |-+| ..++..|++.|| +|+++..
T Consensus 23 ~~~~I~iIG~--------G~mG---~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGF--------GEAA---SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECC--------SHHH---HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECc--------cHHH---HHHHHHHHHCCCCeEEEEcC
Confidence 3589999983 3333 568888999999 8887765
No 437
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=21.80 E-value=74 Score=29.26 Aligned_cols=40 Identities=18% Similarity=0.050 Sum_probs=27.5
Q ss_pred ceEEEEEecccCcccccc-HHHHhhchHHHHHhC--CCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGG-LGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG-~~~~~~~L~~~L~~~--Gh~V~vit~~ 127 (612)
|||++|... |. +.++ ....+..+.+.+.+. |++|.++-..
T Consensus 2 mkiLii~gS--pr-~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~ 44 (212)
T 3r6w_A 2 SRILAVHAS--PR-GERSQSRRLAEVFLAAYREAHPQARVARREVG 44 (212)
T ss_dssp CCEEEEECC--SC-STTCHHHHHHHHHHHHHHHHCTTCCEEEEESS
T ss_pred CEEEEEEeC--CC-CCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 899999975 53 2133 444555677777776 9999988754
No 438
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=21.75 E-value=60 Score=34.36 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=26.0
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|++|||.+|+. |-+| ..|+..|++.||+|.++...
T Consensus 3 m~~~~IgvIG~--------G~mG---~~lA~~L~~~G~~V~v~dr~ 37 (474)
T 2iz1_A 3 MAQANFGVVGM--------AVMG---KNLALNVESRGYTVAIYNRT 37 (474)
T ss_dssp CTTBSEEEECC--------SHHH---HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCcEEEEee--------HHHH---HHHHHHHHhCCCEEEEEcCC
Confidence 44689999873 4444 56788899999999877543
No 439
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=21.73 E-value=4.3e+02 Score=23.50 Aligned_cols=108 Identities=13% Similarity=0.145 Sum_probs=64.4
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHH---cCCceEE
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPIV 506 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI~ 506 (612)
.+++|+.+.+ ...+.+..+-...+-.+. ...+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|+
T Consensus 3 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ 79 (225)
T 1kgs_A 3 VRVLVVEDER-DLADLITEALKKEMFTVD--VCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLM 79 (225)
T ss_dssp CEEEEECSSH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEE
T ss_pred ceEEEEeCCH-HHHHHHHHHHHHCCCEEE--EECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEE
Confidence 3566666543 344455555444432232 2234444433333 46888876554 345777777765 3677765
Q ss_pred cC-CC---CcccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 507 AS-TG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s~-~g---g~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
-. .. ...+.+..|..|++. .|.+.+++..+|..++..
T Consensus 80 ls~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~l~~~i~~~~~~ 120 (225)
T 1kgs_A 80 LTALSDVEYRVKGLNMGADDYLP----------KPFDLRELIARVRALIRR 120 (225)
T ss_dssp EESSCHHHHHHHTCCCCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHhCCccEEEe----------CCCCHHHHHHHHHHHHhh
Confidence 43 22 223455567888876 889999999999988764
No 440
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=21.66 E-value=70 Score=30.67 Aligned_cols=25 Identities=32% Similarity=0.598 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 41 sggIG---~~la~~l~~~G~~V~~~~r~ 65 (279)
T 1xg5_A 41 SGGIG---AAVARALVQQGLKVVGCART 65 (279)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 57777 56888899999999887643
No 441
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=21.65 E-value=61 Score=32.62 Aligned_cols=25 Identities=32% Similarity=0.323 Sum_probs=19.8
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|++| ..|++.|.++||+|.++...
T Consensus 37 tG~IG---~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 37 TGQDG---SYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEecC
Confidence 46666 56788899999999888754
No 442
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=21.65 E-value=89 Score=28.11 Aligned_cols=43 Identities=19% Similarity=0.257 Sum_probs=26.2
Q ss_pred ccccccCCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 76 SLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 76 ~~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
++...-.++|||.+-+.. +|.+ +=..|...|.+.||+|.=+.+
T Consensus 12 ~~~~~~~~~MkIaIgsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~ 54 (169)
T 3ph3_A 12 SGLVPRGSHMKIGIGSDH-------GGYN-LKREIADFLKKRGYEVIDFGT 54 (169)
T ss_dssp ---------CEEEEEECG-------GGHH-HHHHHHHHHHHTTCEEEECCC
T ss_pred cCCcccCCCCEEEEEeCc-------hHHH-HHHHHHHHHHHCCCEEEEcCC
Confidence 344444568999887763 5655 556788889999999976654
No 443
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=21.64 E-value=61 Score=31.62 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=24.5
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||.||+. |-+| ..++..|++.||+|+++...
T Consensus 3 m~~I~iiG~--------G~mG---~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGL--------GHMG---APMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECC--------STTH---HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEee--------cHHH---HHHHHHHHhCCCeEEEEcCC
Confidence 489999984 3333 46788899999999888544
No 444
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=21.62 E-value=60 Score=31.93 Aligned_cols=32 Identities=22% Similarity=0.421 Sum_probs=23.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC---C---CeEEEEEe
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN---G---HRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~---G---h~V~vit~ 126 (612)
|||++.+. +|++| ..|++.|.++ | |+|.++..
T Consensus 1 M~vlVTGa-------tG~iG---~~l~~~L~~~~~~g~~~~~V~~~~r 38 (337)
T 1r6d_A 1 MRLLVTGG-------AGFIG---SHFVRQLLAGAYPDVPADEVIVLDS 38 (337)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTSCTTSCCSEEEEEEC
T ss_pred CeEEEECC-------ccHHH---HHHHHHHHhhhcCCCCceEEEEEEC
Confidence 67766553 46666 5678889996 8 99988864
No 445
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=21.61 E-value=96 Score=31.18 Aligned_cols=40 Identities=13% Similarity=0.029 Sum_probs=28.4
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+|+++.|... .+ .-|-.+...+||..|+++|++|.++...
T Consensus 24 ~~~~i~v~sg-KG---GvGKTTvA~~LA~~lA~~G~rVLlvD~D 63 (349)
T 3ug7_A 24 DGTKYIMFGG-KG---GVGKTTMSAATGVYLAEKGLKVVIVSTD 63 (349)
T ss_dssp CSCEEEEEEC-SS---STTHHHHHHHHHHHHHHSSCCEEEEECC
T ss_pred CCCEEEEEeC-CC---CccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 4555555433 11 3355677888999999999999999865
No 446
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=21.60 E-value=88 Score=30.03 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=24.2
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 23 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 23 EVALVTGA------TSGIG---LEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp CEEEEETC------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 55666632 57777 56888999999999887643
No 447
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=21.57 E-value=4e+02 Score=24.76 Aligned_cols=85 Identities=12% Similarity=0.073 Sum_probs=51.6
Q ss_pred HHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhccEEEEcCCCCCCcHHHHH
Q 007212 419 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRFEPCGLIQLH 496 (612)
Q Consensus 419 d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~-~~~~~~-~i~~~aDv~v~pS~~E~~gl~~lE 496 (612)
+.+++.++.+.+..+.++-+......-.+.++++..++++-+...+.. ..+.+. .+-.+||+++.|... .-++-.
T Consensus 29 ~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~~d---~~v~~~ 105 (224)
T 1vhc_A 29 DDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPGLN---PKIVKL 105 (224)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSSCC---HHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECCCC---HHHHHH
Confidence 344555555555566666666655556678888888887655555443 333333 567889999988532 112334
Q ss_pred HHHcCCceEE
Q 007212 497 AMRYGTVPIV 506 (612)
Q Consensus 497 Ama~G~PvI~ 506 (612)
|-.+|.|++.
T Consensus 106 ar~~g~~~i~ 115 (224)
T 1vhc_A 106 CQDLNFPITP 115 (224)
T ss_dssp HHHTTCCEEC
T ss_pred HHHhCCCEEe
Confidence 5557777654
No 448
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.55 E-value=54 Score=30.02 Aligned_cols=30 Identities=37% Similarity=0.541 Sum_probs=22.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
..|++|+.- | .|+ .+|..|+++|++|+|+=
T Consensus 3 ~dV~IIGaG--p----aGL-----~aA~~La~~G~~V~v~E 32 (336)
T 3kkj_A 3 VPIAIIGTG--I----AGL-----SAAQALTAAGHQVHLFD 32 (336)
T ss_dssp CCEEEECCS--H----HHH-----HHHHHHHHTTCCEEEEC
T ss_pred CCEEEECcC--H----HHH-----HHHHHHHHCCCCEEEEE
Confidence 568888852 3 444 47788999999999983
No 449
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=21.55 E-value=74 Score=30.46 Aligned_cols=25 Identities=28% Similarity=0.518 Sum_probs=19.9
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 18 s~gIG---~~ia~~l~~~G~~V~~~~r~ 42 (270)
T 1yde_A 18 GRGIG---AGIVRAFVNSGARVVICDKD 42 (270)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887543
No 450
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=21.52 E-value=60 Score=30.88 Aligned_cols=29 Identities=31% Similarity=0.496 Sum_probs=21.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vi 124 (612)
|||.||+ .|.+| ..++..|++.||+|+++
T Consensus 1 M~I~iIG--------~G~mG---~~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIG--------FGEVA---QTLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEES--------CSHHH---HHHHHHHHHTTCEEEEC
T ss_pred CeEEEEe--------chHHH---HHHHHHHHHCCCeEEEe
Confidence 7888887 24444 45788899999999874
No 451
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=21.51 E-value=44 Score=34.30 Aligned_cols=31 Identities=19% Similarity=0.276 Sum_probs=23.1
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHh-CCCeEEEEE
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIA 125 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~-~Gh~V~vit 125 (612)
.|||++|+. |.+| ..++..|++ .||+|+++.
T Consensus 2 ~mkI~ViGa--------G~~G---~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 2 TVKVCVCGG--------GNGA---HTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp CEEEEEECC--------SHHH---HHHHHHHTTSTTEEEEEEC
T ss_pred CceEEEECC--------CHHH---HHHHHHHHhCCCCEEEEEe
Confidence 489999983 4445 346667887 599999886
No 452
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=21.49 E-value=75 Score=30.14 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=24.0
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 30 k~vlITGa------s~gIG---~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGA------SRGIG---AAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESST------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 55666532 57777 57889999999998877644
No 453
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=21.35 E-value=99 Score=30.76 Aligned_cols=35 Identities=31% Similarity=0.463 Sum_probs=23.2
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|||+|+++ |. +.....++|.+.||+|..+..+
T Consensus 1 s~~mrIvf~Gt---~~--------fa~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 1 SESLRIIFAGT---PD--------FAARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCCEEEEEEC---SH--------HHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCEEEEEec---CH--------HHHHHHHHHHHCCCcEEEEEeC
Confidence 35799999985 31 2233446667789998766554
No 454
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=21.30 E-value=61 Score=34.50 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=26.0
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+..|||.+|+. |-+| ..|+..|++.||+|.++...
T Consensus 2 ~~~~kIgiIGl--------G~MG---~~lA~~L~~~G~~V~v~dr~ 36 (484)
T 4gwg_A 2 NAQADIALIGL--------AVMG---QNLILNMNDHGFVVCAFNRT 36 (484)
T ss_dssp -CCBSEEEECC--------SHHH---HHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEEECh--------hHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34689999883 3333 57899999999999887544
No 455
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=21.29 E-value=4.1e+02 Score=23.61 Aligned_cols=106 Identities=12% Similarity=0.122 Sum_probs=62.9
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEEcCCC-CCCcHHHHHHHH---cCCceEEcC-
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMR---YGTVPIVAS- 508 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI~s~- 508 (612)
+++|+.+.+ ...+.+..+-...+ .+. ...+...+...+...|++++-... +.-|+.+++.+. ..+|+|+-.
T Consensus 4 ~ilivdd~~-~~~~~l~~~L~~~~-~v~--~~~~~~~al~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~ 79 (220)
T 1p2f_A 4 KIAVVDDDK-NILKKVSEKLQQLG-RVK--TFLTGEDFLNDEEAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLTL 79 (220)
T ss_dssp EEEEECSCH-HHHHHHHHHHTTTE-EEE--EESSHHHHHHCCSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEES
T ss_pred eEEEEeCCH-HHHHHHHHHHHhCC-CEE--EECCHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEEc
Confidence 556666543 34455555544433 222 222344433333667888876554 345777777664 467776543
Q ss_pred CCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 509 TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 509 ~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
... ..+.+..|..|++. .|.+.++|..+|..++..
T Consensus 80 ~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 117 (220)
T 1p2f_A 80 LSDDESVLKGFEAGADDYVT----------KPFNPEILLARVKRFLER 117 (220)
T ss_dssp CCSHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEE----------CCCCHHHHHHHHHHHHcc
Confidence 222 23344567888876 889999999999988764
No 456
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=21.28 E-value=4.8e+02 Score=24.00 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=21.6
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC--CCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~--Gh~V~vit~~ 127 (612)
|||+++.+. .| ..+..|..++.+. +|+|..+..+
T Consensus 1 ~ri~vl~Sg-------~g--snl~ali~~~~~~~~~~~i~~Vis~ 36 (212)
T 1jkx_A 1 MNIVVLISG-------NG--SNLQAIIDACKTNKIKGTVRAVFSN 36 (212)
T ss_dssp CEEEEEESS-------CC--HHHHHHHHHHHTTSSSSEEEEEEES
T ss_pred CEEEEEEEC-------Cc--HHHHHHHHHHHcCCCCceEEEEEeC
Confidence 688888742 22 2466777777665 5887666554
No 457
>2m1z_A LMO0427 protein; homolog PTS system IIB component, transferase; NMR {Listeria monocytogenes egd-e}
Probab=21.27 E-value=1.2e+02 Score=24.93 Aligned_cols=39 Identities=15% Similarity=0.085 Sum_probs=27.0
Q ss_pred CceEEEEEecccCccccccHHHHh--hchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~--~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||+.|+.. | +|=.-.|+ ..|-++-.++||++.|=+-.
T Consensus 2 ~mkivaVtaC--p---tGiAhTymAAeaLekaA~~~G~~ikVEtqg 42 (106)
T 2m1z_A 2 KRKIIAVTAC--A---TGVAHTYMAAQALKKGAKKMGNLIKVETQG 42 (106)
T ss_dssp CCEEEEEEEC--S---SCHHHHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred CccEEEEEEC--C---CcHHHHHHHHHHHHHHHHHCCCEEEEEEec
Confidence 5999999985 5 45444444 23555666789999998854
No 458
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=21.27 E-value=76 Score=30.36 Aligned_cols=34 Identities=18% Similarity=0.506 Sum_probs=25.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 16 ~k~vlVTGa------s~gIG---~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 16 KKLVVITGA------SSGIG---EAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp CCEEEEEST------TSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 356666643 57777 57889999999999887654
No 459
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=21.24 E-value=70 Score=30.46 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=25.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 28 ~k~vlVTGa------s~gIG---~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 28 QKVVVITGA------SQGIG---AGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CCEEEESSC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 456666632 57777 57889999999999887654
No 460
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=21.22 E-value=64 Score=31.74 Aligned_cols=24 Identities=21% Similarity=0.311 Sum_probs=19.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEe
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~ 126 (612)
+|++| ..|++.|.++||+|.++..
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 10 CGFLG---SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEEC
T ss_pred CchhH---HHHHHHHHhCCCEEEEEeC
Confidence 46666 5688889999999988864
No 461
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=21.19 E-value=3e+02 Score=21.61 Aligned_cols=106 Identities=19% Similarity=0.212 Sum_probs=61.9
Q ss_pred EEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHH--cCCceEEcC
Q 007212 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR--YGTVPIVAS 508 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma--~G~PvI~s~ 508 (612)
+++|+.+.+ .....+...-...+-.+. ...+...+-..+. ..|++++-... +.-|+.+++.+. ..+|+|+-.
T Consensus 4 ~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t 80 (120)
T 3f6p_A 4 KILVVDDEK-PIADILEFNLRKEGYEVH--CAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLT 80 (120)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEE
T ss_pred eEEEEECCH-HHHHHHHHHHHhCCEEEE--EeCCHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEE
Confidence 566666543 344455554444442232 2234554444443 46888876554 335666776664 356776443
Q ss_pred C-CC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 509 T-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 509 ~-gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
. .. ..+.++.|..+|+. .|.+.+++...|..++.
T Consensus 81 ~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~l~~~i~~~l~ 118 (120)
T 3f6p_A 81 AKDSEIDKVIGLEIGADDYVT----------KPFSTRELLARVKANLR 118 (120)
T ss_dssp ESSCHHHHHHHHHTTCCEEEE----------ESCCHHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHhCCcceeEc----------CCCCHHHHHHHHHHHHh
Confidence 2 22 12344567888876 88999999999988764
No 462
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=21.18 E-value=65 Score=31.53 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=23.8
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 2 ~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICGG-------AGYIG---SHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 56665543 46665 67888899999999988643
No 463
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=21.16 E-value=3.5e+02 Score=22.28 Aligned_cols=108 Identities=15% Similarity=0.192 Sum_probs=62.9
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh---ccEEEEcCCC-CCCcHHHHHHHH---cCCce
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG---ADFILIPSRF-EPCGLIQLHAMR---YGTVP 504 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~---aDv~v~pS~~-E~~gl~~lEAma---~G~Pv 504 (612)
..+++|+.+.. ...+.+.+.... + ......-+...+...+.. .|++++-... +.-|+.+++.+. ..+|+
T Consensus 4 ~~~ILivdd~~-~~~~~l~~~L~~-~--~~v~~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~i 79 (151)
T 3kcn_A 4 NERILLVDDDY-SLLNTLKRNLSF-D--FEVTTCESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVY 79 (151)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHTT-T--SEEEEESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHhcc-C--ceEEEeCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEE
Confidence 35677777644 333444444332 2 222222344444444432 3888876654 455777776654 35666
Q ss_pred EEc-CCCC---cccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 505 IVA-STGG---LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s-~~gg---~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|+- .... ..+.+..| ..+++. .|-+.++|.++|..+++.
T Consensus 80 i~~s~~~~~~~~~~~~~~g~~~~~l~----------KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 80 LMLTGNQDLTTAMEAVNEGQVFRFLN----------KPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp EEEECGGGHHHHHHHHHHTCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHcCCeeEEEc----------CCCCHHHHHHHHHHHHHH
Confidence 643 3222 23344556 678876 899999999999999886
No 464
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=21.15 E-value=1.4e+02 Score=24.33 Aligned_cols=108 Identities=13% Similarity=0.080 Sum_probs=62.8
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-C--CCcHHHHHHHHc---CCce
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-E--PCGLIQLHAMRY---GTVP 504 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E--~~gl~~lEAma~---G~Pv 504 (612)
.+++|+.+.. .....+.++....+-.+. ..-+...+...+. ..|++++-... + .-|+.+++.+.. .+|+
T Consensus 7 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~i 83 (136)
T 3kto_A 7 PIIYLVDHQK-DARAALSKLLSPLDVTIQ--CFASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPT 83 (136)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTSSSEEE--EESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCE
T ss_pred CeEEEEcCCH-HHHHHHHHHHHHCCcEEE--EeCCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCE
Confidence 4566666543 344455555444332222 2223443322222 35777776554 3 456777776653 5677
Q ss_pred EEcC-CCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 505 IVAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
|+-. ... ..+.+..|..+++. .|-+.++|..+|.+++..
T Consensus 84 i~~s~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~l~~~i~~~~~~ 126 (136)
T 3kto_A 84 IVMASSSDIPTAVRAMRASAADFIE----------KPFIEHVLVHDVQQIING 126 (136)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEE----------SSBCHHHHHHHHHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHcChHHhee----------CCCCHHHHHHHHHHHHhc
Confidence 6443 322 23445567888876 899999999999999876
No 465
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=21.15 E-value=1.1e+02 Score=27.30 Aligned_cols=40 Identities=20% Similarity=0.178 Sum_probs=30.9
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+.|+++.++.. + ..|-.+.+..|+..|..+|++|.++...
T Consensus 2 ~~~~~i~i~G~--s---GsGKTTl~~~L~~~l~~~g~~v~~ik~~ 41 (169)
T 1xjc_A 2 NAMNVWQVVGY--K---HSGKTTLMEKWVAAAVREGWRVGTVKHH 41 (169)
T ss_dssp --CCEEEEECC--T---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEEECC--C---CCCHHHHHHHHHHhhHhcCCeeeEEEeC
Confidence 35777777652 2 5688889999999999999999998855
No 466
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=21.12 E-value=4e+02 Score=24.66 Aligned_cols=36 Identities=14% Similarity=0.116 Sum_probs=23.2
Q ss_pred CCceEEEEEecccCccccccHHHHhhchHHHHHh-CCCeEEEEEec
Q 007212 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~-~Gh~V~vit~~ 127 (612)
.+|||+++.+. .|.-+..|..++.+ .+++|..+.++
T Consensus 4 ~~~riavl~SG---------~Gsnl~all~~~~~~~~~eI~~Vis~ 40 (215)
T 3tqr_A 4 EPLPIVVLISG---------NGTNLQAIIGAIQKGLAIEIRAVISN 40 (215)
T ss_dssp CCEEEEEEESS---------CCHHHHHHHHHHHTTCSEEEEEEEES
T ss_pred CCcEEEEEEeC---------CcHHHHHHHHHHHcCCCCEEEEEEeC
Confidence 46899887642 23356677777665 36787776664
No 467
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=20.94 E-value=3.5e+02 Score=22.27 Aligned_cols=109 Identities=17% Similarity=0.207 Sum_probs=63.6
Q ss_pred CeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHH---cCCceE
Q 007212 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma---~G~PvI 505 (612)
..+++|+.+.. .....+.......+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 7 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (154)
T 2rjn_A 7 NYTVMLVDDEQ-PILNSLKRLIKRLGCNII--TFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERV 83 (154)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHTTTCEEE--EESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEE
T ss_pred CCeEEEEcCCH-HHHHHHHHHHHHcCCeEE--EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEE
Confidence 46677776544 344445554444442232 2234444444443 36888876554 345666666664 367776
Q ss_pred Ec-CCCC---cccceecC-cceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 506 VA-STGG---LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s-~~gg---~~e~v~~g-~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
+- .... ..+.+..| ..+++. .|.+.++|...|..++..
T Consensus 84 ~ls~~~~~~~~~~~~~~g~~~~~l~----------kP~~~~~L~~~i~~~~~~ 126 (154)
T 2rjn_A 84 VISGYADAQATIDAVNRGKISRFLL----------KPWEDEDVFKVVEKGLQL 126 (154)
T ss_dssp EEECGGGHHHHHHHHHTTCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEecCCCHHHHHHHHhccchheeee----------CCCCHHHHHHHHHHHHHH
Confidence 44 3222 22333445 678876 889999999999998875
No 468
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=20.94 E-value=48 Score=31.21 Aligned_cols=31 Identities=23% Similarity=0.184 Sum_probs=22.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vi 124 (612)
||+++|+.- .||+| ..+++.|+++|++|.++
T Consensus 1 ~k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 1 MVIALVTHA------RHFAG---PAAVEALTQDGYTVVCH 31 (244)
T ss_dssp -CEEEESST------TSTTH---HHHHHHHHHTTCEEEEC
T ss_pred CCEEEEECC------CChHH---HHHHHHHHHCCCEEEEe
Confidence 355566532 56776 56888999999999876
No 469
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=20.91 E-value=59 Score=33.20 Aligned_cols=35 Identities=34% Similarity=0.421 Sum_probs=24.8
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+.|+|++|+.- .+|+ ..|..|+++||+|+|+=.+
T Consensus 1 m~~~~v~iiG~G------~~Gl-----~~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAG------FSGA-----VIGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCS------HHHH-----HHHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEECcC------HHHH-----HHHHHHHHCCCcEEEEEec
Confidence 456899999842 2333 3567788999999999754
No 470
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=20.88 E-value=3.1e+02 Score=21.63 Aligned_cols=107 Identities=12% Similarity=0.120 Sum_probs=62.1
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCC-ceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc-----CCc
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 503 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~-~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~-----G~P 503 (612)
.+++|+.+.+ .....+...-...+- .+. ..-+.+.....+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 7 ~~ilivdd~~-~~~~~l~~~L~~~g~~~v~--~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~~~ 83 (129)
T 1p6q_A 7 IKVLIVDDQV-TSRLLLGDALQQLGFKQIT--AAGDGEQGMKIMAQNPHHLVISDFNMPKMDGLGLLQAVRANPATKKAA 83 (129)
T ss_dssp CCEEEECSSH-HHHHHHHHHHHTTTCSCEE--CCSSHHHHHHHHHTSCCSEEEECSSSCSSCHHHHHHHHTTCTTSTTCE
T ss_pred CeEEEEcCCH-HHHHHHHHHHHHCCCcEEE--ecCCHHHHHHHHHcCCCCEEEEeCCCCCCCHHHHHHHHhcCccccCCC
Confidence 4566776544 344445554444332 121 2223444434443 36888876554 3457778887753 566
Q ss_pred eEEcCCCCc----ccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 504 PIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 504 vI~s~~gg~----~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
+|.-...+- .+.++.|..+++. .|.+.+++..+|..++.
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~ 126 (129)
T 1p6q_A 84 FIILTAQGDRALVQKAAALGANNVLA----------KPFTIEKMKAAIEAVFG 126 (129)
T ss_dssp EEECCSCCCHHHHHHHHHHTCSCEEC----------CCSSHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHcCCCEEEE----------CCCCHHHHHHHHHHHHH
Confidence 665433222 2344567788865 89999999999988765
No 471
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=20.88 E-value=81 Score=30.53 Aligned_cols=40 Identities=10% Similarity=-0.005 Sum_probs=27.5
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++++....+. .... .....+++++.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~-~~~~--~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANI-NIKK--DSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGC-CTTT--CHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhC-CcCC--ChHHHHHHHHHHCCCEEEEEchh
Confidence 6999998643221 1111 22356899999999999999875
No 472
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=20.75 E-value=65 Score=30.52 Aligned_cols=25 Identities=36% Similarity=0.508 Sum_probs=19.7
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 13 s~gIG---~~ia~~l~~~G~~V~~~~r~ 37 (260)
T 1x1t_A 13 TSGIG---LGIATALAAQGADIVLNGFG 37 (260)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEECCS
T ss_pred CcHHH---HHHHHHHHHcCCEEEEEeCC
Confidence 57777 57889999999998877543
No 473
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=20.72 E-value=66 Score=31.22 Aligned_cols=32 Identities=22% Similarity=0.259 Sum_probs=24.1
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit 125 (612)
.|+++|+.- .||+| ..+++.|+++|++|.++.
T Consensus 9 ~k~~lVTGa------s~GIG---~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 9 VPVALVTGA------AKRLG---RSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp CCEEEETTC------SSHHH---HHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECC------CchHH---HHHHHHHHHCCCeEEEEc
Confidence 356666632 57777 578889999999998876
No 474
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=20.70 E-value=74 Score=31.23 Aligned_cols=33 Identities=30% Similarity=0.450 Sum_probs=24.3
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |.+| ..++..|++.||+|.++...
T Consensus 30 ~~~I~iIG~--------G~mG---~~~a~~l~~~g~~V~~~~~~ 62 (316)
T 2uyy_A 30 DKKIGFLGL--------GLMG---SGIVSNLLKMGHTVTVWNRT 62 (316)
T ss_dssp SSCEEEECC--------SHHH---HHHHHHHHHTTCCEEEECSS
T ss_pred CCeEEEEcc--------cHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 589999983 4444 45777889999999776543
No 475
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=20.69 E-value=1.6e+02 Score=25.86 Aligned_cols=67 Identities=21% Similarity=0.196 Sum_probs=41.8
Q ss_pred cccCHH--HHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhccEEEE
Q 007212 414 EQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 414 ~~Kg~d--~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~~aDv~v~ 483 (612)
.+|+.| +.++++......+.-+++-|+++ +...++.+..+++.++..++ +.......+.+.||-++.
T Consensus 90 ~k~~~Dv~laiD~~~~a~~~d~~vLvSgD~D--F~plv~~lr~~~G~~V~v~g-~~~~~s~~L~~~ad~fi~ 158 (165)
T 2qip_A 90 AKGDWDVGITLDAIEIAPDVDRVILVSGDGD--FSLLVERIQQRYNKKVTVYG-VPRLTSQTLIDCADNFVA 158 (165)
T ss_dssp CSCCCHHHHHHHHHHHGGGCSEEEEECCCGG--GHHHHHHHHHHHCCEEEEEE-CGGGSCHHHHHHSSEEEE
T ss_pred cCCCccHHHHHHHHHhhccCCEEEEEECChh--HHHHHHHHHHHcCcEEEEEe-CCCcChHHHHHhCCEEEe
Confidence 345555 56677766533465555556665 88888888876565565444 333233467899998774
No 476
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=20.64 E-value=61 Score=33.82 Aligned_cols=32 Identities=28% Similarity=0.456 Sum_probs=23.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||++|+. |-+| ..++..|++.||+|+++...
T Consensus 1 mkI~VIG~--------G~vG---~~~A~~la~~G~~V~~~d~~ 32 (436)
T 1mv8_A 1 MRISIFGL--------GYVG---AVCAGCLSARGHEVIGVDVS 32 (436)
T ss_dssp CEEEEECC--------STTH---HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECC--------CHHH---HHHHHHHHHCCCEEEEEECC
Confidence 78999984 3333 35777899999999887543
No 477
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=20.63 E-value=65 Score=26.90 Aligned_cols=32 Identities=25% Similarity=0.513 Sum_probs=22.9
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
++|++++ .|++| ..+++.|.+.|++|.++...
T Consensus 7 ~~v~I~G--------~G~iG---~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIG--------LGRFG---GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEEC--------CSHHH---HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEEC--------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4677776 24444 45778899999999888654
No 478
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=20.58 E-value=4.8e+02 Score=23.62 Aligned_cols=108 Identities=16% Similarity=0.147 Sum_probs=63.0
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--HhccEEEEcCCC-CCCcHHHHHHHHc--CCceEEc
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY--GTVPIVA 507 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~--~~aDv~v~pS~~-E~~gl~~lEAma~--G~PvI~s 507 (612)
.+++|+.+.+ ...+.+..+-...+-.+.. .-+...+...+ ...|++++-... +.-|+.+++.+.. .+|+|+-
T Consensus 6 ~~ILivdd~~-~~~~~l~~~L~~~g~~v~~--~~~~~~al~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~l 82 (238)
T 2gwr_A 6 QRILVVDDDA-SLAEMLTIVLRGEGFDTAV--IGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVML 82 (238)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEEE--ECCGGGHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEE
T ss_pred CeEEEEeCCH-HHHHHHHHHHHHCCCEEEE--ECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEE
Confidence 4666666543 3444455444443322322 22333332333 246888876554 3457777777653 6777644
Q ss_pred C-CCC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHHh
Q 007212 508 S-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 508 ~-~gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~ 553 (612)
. ... ..+.+..|..|++. .|.+.++|..+|..++..
T Consensus 83 t~~~~~~~~~~~~~~Ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 122 (238)
T 2gwr_A 83 TAKTDTVDVVLGLESGADDYIM----------KPFKPKELVARVRARLRR 122 (238)
T ss_dssp EETTCCSCHHHHHHTTCCEEEE----------ESCCHHHHHHHHHHHCCC
T ss_pred eCCCCHHHHHHHHHCCCCEEEe----------CCCCHHHHHHHHHHHHhh
Confidence 3 222 23345567888876 889999999999988653
No 479
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=20.54 E-value=72 Score=30.25 Aligned_cols=24 Identities=21% Similarity=0.202 Sum_probs=19.4
Q ss_pred ccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 101 GGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 101 GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||+| ..+++.|+++|++|.++...
T Consensus 20 ~gIG---~~ia~~l~~~G~~V~~~~r~ 43 (261)
T 2wyu_A 20 RSLG---FAIAAKLKEAGAEVALSYQA 43 (261)
T ss_dssp SSHH---HHHHHHHHHHTCEEEEEESC
T ss_pred CcHH---HHHHHHHHHCCCEEEEEcCC
Confidence 7888 46888899999999887643
No 480
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=20.52 E-value=55 Score=32.71 Aligned_cols=43 Identities=2% Similarity=-0.079 Sum_probs=27.4
Q ss_pred CCCceEEEEEecccCccccccHHH-HhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGD-VLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~-~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|++|||+++..-... .-.++. ....++++|.+.||+|.++...
T Consensus 1 m~~~~v~vl~gG~s~---E~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (343)
T 1e4e_A 1 MNRIKVAILFGGCSE---EHDVSVKSAIEIAANINKEKYEPLYIGIT 44 (343)
T ss_dssp -CCEEEEEEEECSST---THHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEeCCCCC---CcchhHHHHHHHHHHhhhcCCEEEEEEEc
Confidence 457999999743211 111111 2346788999999999998754
No 481
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=20.48 E-value=53 Score=29.07 Aligned_cols=38 Identities=24% Similarity=0.226 Sum_probs=28.3
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|||+++-. +.+|....+...+++.|.+.|++|.++...
T Consensus 10 ~ki~I~Y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 47 (167)
T 1ykg_A 10 PGITIISA-----SQTGNARRVAEALRDDLLAAKLNVKLVNAG 47 (167)
T ss_dssp --CEEEEE-----CSSSHHHHHHHHHHHHHHHHTCCCEEEEGG
T ss_pred CeEEEEEE-----CCchHHHHHHHHHHHHHHHCCCceEEeehh
Confidence 56766643 237999999999999999999998887543
No 482
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=20.48 E-value=82 Score=29.78 Aligned_cols=24 Identities=13% Similarity=0.115 Sum_probs=19.6
Q ss_pred ccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 101 GGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 101 GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
||+| ..+++.|+++|++|.++...
T Consensus 26 ~giG---~~ia~~l~~~G~~V~~~~r~ 49 (271)
T 3ek2_A 26 RSIA---YGIAKACKREGAELAFTYVG 49 (271)
T ss_dssp TSHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcHH---HHHHHHHHHcCCCEEEEecc
Confidence 7887 57888999999999877644
No 483
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=20.41 E-value=3.9e+02 Score=24.66 Aligned_cols=107 Identities=14% Similarity=0.067 Sum_probs=59.8
Q ss_pred eEEEEEecCChhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hccEEEEcCCC-CCCcHHHHHHHHc--CCceEEc
Q 007212 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY--GTVPIVA 507 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~~~~~~~~i~~--~aDv~v~pS~~-E~~gl~~lEAma~--G~PvI~s 507 (612)
.+++|+.+.+ .....+..+....+..+ ....+...+...+. ..|++|+-... +.-|+.+++.+.. .+|+|+-
T Consensus 38 ~~ILivdd~~-~~~~~l~~~L~~~g~~v--~~~~~~~~al~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~l 114 (249)
T 3q9s_A 38 QRILVIEDDH-DIANVLRMDLTDAGYVV--DHADSAMNGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVL 114 (249)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHTTTCEE--EEESSHHHHHHHHHHSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEE
T ss_pred CEEEEEECCH-HHHHHHHHHHHHCCCEE--EEeCCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEE
Confidence 4566665543 34444444444433212 22223333333332 35777775554 2346666666653 4666544
Q ss_pred CC-CC---cccceecCcceEEecccccccccCCCCCHHHHHHHHHHHHH
Q 007212 508 ST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 508 ~~-gg---~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~ 552 (612)
.. .. ..+.+..|..||+. .|.+.++|..+|..++.
T Consensus 115 t~~~~~~~~~~a~~~Ga~~yl~----------Kp~~~~~L~~~i~~~l~ 153 (249)
T 3q9s_A 115 TARDTVEEKVRLLGLGADDYLI----------KPFHPDELLARVKVQLR 153 (249)
T ss_dssp ESCCSHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHC
T ss_pred ECCCCHHHHHHHHHCCCcEEEE----------CCCCHHHHHHHHHHHHh
Confidence 32 22 22344567889976 89999999999998876
No 484
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=20.39 E-value=80 Score=30.71 Aligned_cols=25 Identities=20% Similarity=0.256 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 43 s~gIG---~aia~~L~~~G~~V~~~~r~ 67 (291)
T 3cxt_A 43 SYGIG---FAIASAYAKAGATIVFNDIN 67 (291)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888999999999887643
No 485
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=20.36 E-value=42 Score=33.74 Aligned_cols=31 Identities=23% Similarity=0.498 Sum_probs=22.4
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhCCC-eEEEEE
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH-RVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh-~V~vit 125 (612)
|||++++. +|++| ..|++.|.++|| +|..+.
T Consensus 1 M~VlVtGa-------tG~iG---~~l~~~L~~~g~~~v~~~d 32 (369)
T 3st7_A 1 MNIVITGA-------KGFVG---KNLKADLTSTTDHHIFEVH 32 (369)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHHCCCEEEECC
T ss_pred CEEEEECC-------CCHHH---HHHHHHHHhCCCCEEEEEC
Confidence 78776654 46665 568888999999 776653
No 486
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=20.34 E-value=62 Score=30.57 Aligned_cols=25 Identities=28% Similarity=0.428 Sum_probs=19.6
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 13 s~giG---~~ia~~l~~~G~~V~~~~r~ 37 (255)
T 2q2v_A 13 TSGIG---LGIAQVLARAGANIVLNGFG 37 (255)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 57889999999999876543
No 487
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=20.30 E-value=1.4e+02 Score=30.45 Aligned_cols=79 Identities=13% Similarity=0.074 Sum_probs=52.7
Q ss_pred HHHHhccEEEEcCCC--CC-CcHHHHHHHHcCCceEEcCCCCcccceecCcceEEecccccccccCCCCCHHHHHHHHHH
Q 007212 473 MIIAGADFILIPSRF--EP-CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 473 ~i~~~aDv~v~pS~~--E~-~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ 549 (612)
.+++..-+.|.--.. +. .-=++.+|+.+|+.+|+-..+.+.+++.. ..|+. +-+-.++++||+-|..
T Consensus 227 ~~l~~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~~~~~~~Pp--~SfI~--------~~dF~s~~~La~yL~~ 296 (371)
T 2nzw_A 227 EFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSPSVAKDFNP--KSFVN--------VHDFKNFDEAIDYIKY 296 (371)
T ss_dssp HHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCTTGGGTSCG--GGSEE--------GGGSSSHHHHHHHHHH
T ss_pred HHHhcCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCCchhhhCCC--CceEE--------cccCCCHHHHHHHHHH
Confidence 466777776654322 22 23368899999998888766666666543 34432 2266799999999999
Q ss_pred HHHhhCHHHHHHHH
Q 007212 550 ALATYGTQALAEMM 563 (612)
Q Consensus 550 ll~~~~~~~~~~~~ 563 (612)
+-++ +.++.+.-
T Consensus 297 L~~n--~~~Y~~y~ 308 (371)
T 2nzw_A 297 LHTH--KNAYLDML 308 (371)
T ss_dssp HHTC--HHHHHHHH
T ss_pred HhcC--HHHHHHHH
Confidence 9887 66666543
No 488
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=20.25 E-value=45 Score=28.41 Aligned_cols=33 Identities=27% Similarity=0.224 Sum_probs=25.1
Q ss_pred CceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
+++|++++. |- +-..+++.|.+.||+|+++...
T Consensus 7 ~~~viIiG~--------G~---~G~~la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 7 CNHALLVGY--------GR---VGSLLGEKLLASDIPLVVIETS 39 (140)
T ss_dssp CSCEEEECC--------SH---HHHHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEECc--------CH---HHHHHHHHHHHCCCCEEEEECC
Confidence 467888772 32 3457888899999999999876
No 489
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=20.21 E-value=86 Score=29.47 Aligned_cols=25 Identities=20% Similarity=0.266 Sum_probs=20.0
Q ss_pred cccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 11 s~gIG---~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 11 GHGIG---KQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 57889999999999887644
No 490
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=20.20 E-value=87 Score=31.42 Aligned_cols=41 Identities=22% Similarity=0.220 Sum_probs=31.6
Q ss_pred CCCceEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
.++|+|++++.- + .-|-.+...+||.+|++.|++|.++...
T Consensus 13 ~~~~~i~~~sgk--G---GvGKTt~a~~lA~~la~~g~~vllid~D 53 (334)
T 3iqw_A 13 QRSLRWIFVGGK--G---GVGKTTTSCSLAIQLAKVRRSVLLLSTD 53 (334)
T ss_dssp CTTCCEEEEECS--T---TSSHHHHHHHHHHHHTTSSSCEEEEECC
T ss_pred CCCeEEEEEeCC--C---CccHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 345788887752 1 3456677888999999999999999865
No 491
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=20.15 E-value=2.9e+02 Score=25.17 Aligned_cols=138 Identities=14% Similarity=0.022 Sum_probs=0.0
Q ss_pred CCCCCCCcEEEEEc-cCccccCHHHHHHHHHhcccCCeEEEEEecCChhHHHHHHHHHHHCCCceEEEecc---ChHHHH
Q 007212 397 LPVDRNIPVIGFIG-RLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF---NIPLAH 472 (612)
Q Consensus 397 l~~~~~~~~i~~iG-rl~~~Kg~d~li~A~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~~~---~~~~~~ 472 (612)
+|......+-+|-| | ..........+.+.+..-..=.-+|.|.|+..++....+-+.+.+..+.++..- ..+..+
T Consensus 8 ~~~~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~ 86 (189)
T 3sbx_A 8 SDEPGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHGGWTVGVIPKMLVHRELAD 86 (189)
T ss_dssp -----CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTTCCEEEEEETTTTTTTTBC
T ss_pred CCCCCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCcEEEEcCchhhhcccCC
Q ss_pred -----------------HHHHhccEEEEcCCCCCCcHH--HHHHHH------cCCceEEcCCCCccc-------------
Q 007212 473 -----------------MIIAGADFILIPSRFEPCGLI--QLHAMR------YGTVPIVASTGGLVD------------- 514 (612)
Q Consensus 473 -----------------~i~~~aDv~v~pS~~E~~gl~--~lEAma------~G~PvI~s~~gg~~e------------- 514 (612)
.+...||.+|.-.= ++|.- ++|++. +++||+.-+..|+.+
T Consensus 87 ~~~~~~i~~~~~~~Rk~~m~~~sda~IalPG--G~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~G 164 (189)
T 3sbx_A 87 HDADELVVTETMWERKQVMEDRANAFITLPG--GVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTG 164 (189)
T ss_dssp TTCSEEEEESSHHHHHHHHHHHCSEEEECSC--CHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHHHHTT
T ss_pred CCCCeeEEcCCHHHHHHHHHHHCCEEEEeCC--CcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCC
Q ss_pred ceecCcceEEecccccccccCCCCCHHHHHHHH
Q 007212 515 TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 515 ~v~~g~~G~~~~~~~~~~~~v~~~d~~~la~~i 547 (612)
++.+....++. -.+|++++.+.|
T Consensus 165 fi~~~~~~~i~----------~~d~~ee~~~~l 187 (189)
T 3sbx_A 165 YVSRTAMERLI----------VVDNLDDALQAC 187 (189)
T ss_dssp SSCHHHHHHEE----------EESSHHHHHHHH
T ss_pred CCCHHHcCeEE----------EeCCHHHHHHHh
No 492
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=20.10 E-value=2.9e+02 Score=27.47 Aligned_cols=44 Identities=20% Similarity=0.252 Sum_probs=31.3
Q ss_pred HHHHHHhccEEEEcC--CCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007212 471 AHMIIAGADFILIPS--RFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~i~~~aDv~v~pS--~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++.. .-+. +.-..++.|--|.-+|-+..|++.+
T Consensus 188 l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd 236 (334)
T 2pi1_A 188 LDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVD 236 (334)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccC
Confidence 446899999988643 2233 4556888888888888877777654
No 493
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=20.10 E-value=84 Score=29.03 Aligned_cols=36 Identities=14% Similarity=0.109 Sum_probs=26.2
Q ss_pred ceEEEEEecccCccccccHHHHhhchHHHHHhC-CCeEEEEEec
Q 007212 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~-Gh~V~vit~~ 127 (612)
|||++--.. ..| ......|.+.|.+. |++|.|+.+.
T Consensus 1 ~~IllgvTG------sia-a~k~~~ll~~L~~~~g~~V~vv~T~ 37 (197)
T 1sbz_A 1 MKLIVGMTG------ATG-APLGVALLQALREMPNVETHLVMSK 37 (197)
T ss_dssp CEEEEEECS------SSC-HHHHHHHHHHHHTCTTCEEEEEECH
T ss_pred CEEEEEEeC------hHH-HHHHHHHHHHHHhccCCEEEEEECc
Confidence 677666532 122 34678899999999 9999999865
No 494
>4egs_A Ribose 5-phosphate isomerase RPIB; tyrosine phosphatase, dephosphorylation, hydrolase; 2.30A {Thermoanaerobacter tengcongensis}
Probab=20.05 E-value=1e+02 Score=27.83 Aligned_cols=44 Identities=18% Similarity=0.111 Sum_probs=25.1
Q ss_pred ccccCCCceEEEEEecccCccccccHHHHhhchHHHHH-hCCCeEEEEEec
Q 007212 78 MIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALA-ANGHRVMTIAPR 127 (612)
Q Consensus 78 ~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~L~~~L~-~~Gh~V~vit~~ 127 (612)
..+...+||||||+.. .-.=+.+...+.+.+. +.|.++.|.+..
T Consensus 28 ~~m~~~~mkVLFVC~G------NiCRSpmAE~l~r~~~~~~g~~~~v~SAG 72 (180)
T 4egs_A 28 QQMGRGSMRVLFVCTG------NTCRSPMAEGIFNAKSKALGKDWEAKSAG 72 (180)
T ss_dssp ------CCEEEEEESS------SSSHHHHHHHHHHHHHHHTTCCCEEEEEE
T ss_pred CcCCCCCeEEEEEeCC------CcccCHHHHHHHHHHHHhcCCceEEEEee
Confidence 3344458999999964 2233445555655554 468788777765
No 495
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=20.04 E-value=95 Score=29.22 Aligned_cols=33 Identities=18% Similarity=0.473 Sum_probs=24.2
Q ss_pred eEEEEEecccCccccccHHHHhhchHHHHHhCCCeEEEEEec
Q 007212 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~L~~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 10 k~vlITGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 42 (261)
T 3n74_A 10 KVALITGA------GSGFG---EGMAKRFAKGGAKVVIVDRD 42 (261)
T ss_dssp CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 55556532 57777 57889999999999887644
No 496
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=20.03 E-value=7.4e+02 Score=25.65 Aligned_cols=84 Identities=15% Similarity=0.088 Sum_probs=51.3
Q ss_pred CcHHHHHHH-HcCCceEEcCCCCcccceecC----cceEEecccccccccCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007212 490 CGLIQLHAM-RYGTVPIVASTGGLVDTVEEG----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 490 ~gl~~lEAm-a~G~PvI~s~~gg~~e~v~~g----~~G~~~~~~~~~~~~v~~~d~~~la~~i~~ll~~~~~~~~~~~~~ 564 (612)
-+..++.+. ..|+|+....+|--.+-++.- .... +...+|+..|++.+++.++. .+...++.+
T Consensus 254 ~gG~~ls~~~~~g~PI~fig~Ge~vddL~~f~~~~~~~~----------llg~gd~~~l~e~~~~~~~~--~~~~~~~~~ 321 (443)
T 3dm5_A 254 KGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSR----------LLGLGDIQGLLEKFKELEKE--VEIKEEDIE 321 (443)
T ss_dssp SHHHHHHHHHTTCCCEEEEECSSSTTCEEECCHHHHHHH----------HTTTTCHHHHHHHHHHHHTT--HHHHHHHHH
T ss_pred cccHHHHHHHHHCCCEEEEEcCCChHHhhhCCHHHHHHH----------HcCCCcHHHHHHHHHHhhhh--hHHHHHHHH
Confidence 344444433 579999754444333433321 1112 23678999999999998875 331113555
Q ss_pred HHHHhhcCcHHHHHHHHHHHH
Q 007212 565 NGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 565 ~~~~~~fsw~~~a~~~~~~y~ 585 (612)
+-..-.|+.+.+.+++.++-.
T Consensus 322 k~~~~~f~l~d~~~q~~~~~k 342 (443)
T 3dm5_A 322 RFLRGKFTLKDMYAQLEAMRK 342 (443)
T ss_dssp HHHTTCCCHHHHHHHHHHHHT
T ss_pred HHhhCCcCHHHHHHHHHHHHh
Confidence 555677999999998887653
Done!