Query 007213
Match_columns 612
No_of_seqs 564 out of 3636
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 20:03:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fln_A Protease DO-like 2, chl 100.0 8.6E-80 2.9E-84 680.2 52.3 457 122-611 47-504 (539)
2 4a8c_A Periplasmic PH-dependen 100.0 8.3E-57 2.8E-61 491.0 41.9 392 110-584 14-424 (436)
3 3pv2_A DEGQ; trypsin fold, PDZ 100.0 7E-56 2.4E-60 485.0 35.8 397 110-584 20-447 (451)
4 1ky9_A Protease DO, DEGP, HTRA 100.0 3.4E-54 1.2E-58 471.3 22.2 353 148-583 85-443 (448)
5 3stj_A Protease DEGQ; serine p 100.0 1.1E-48 3.8E-53 414.2 30.5 305 110-436 14-337 (345)
6 1te0_A Protease DEGS; two doma 100.0 1.5E-45 5E-50 386.7 29.5 298 110-433 10-315 (318)
7 3qo6_A Protease DO-like 1, chl 100.0 1.8E-44 6E-49 382.9 27.0 298 115-435 20-335 (348)
8 1y8t_A Hypothetical protein RV 100.0 1.7E-42 5.6E-47 364.4 31.1 282 110-434 7-315 (324)
9 1lcy_A HTRA2 serine protease; 100.0 1.1E-43 3.6E-48 373.6 21.3 290 110-431 16-322 (325)
10 3num_A Serine protease HTRA1; 100.0 1.4E-42 4.8E-47 366.1 20.3 291 111-433 16-322 (332)
11 1l1j_A Heat shock protease HTR 100.0 1E-32 3.5E-37 277.5 16.4 214 111-332 6-239 (239)
12 3sti_A Protease DEGQ; serine p 100.0 1.6E-32 5.3E-37 276.9 17.4 210 110-329 14-241 (245)
13 3lgi_A Protease DEGS; stress-s 100.0 1.6E-30 5.5E-35 261.2 22.4 207 110-330 21-234 (237)
14 3tjo_A Serine protease HTRA1; 100.0 4E-29 1.4E-33 250.1 18.9 194 110-320 32-230 (231)
15 3k6y_A Serine protease, possib 99.9 1.1E-26 3.6E-31 233.2 22.9 191 113-325 35-231 (237)
16 2as9_A Serine protease; trypsi 99.9 2.9E-23 9.8E-28 204.4 14.5 182 123-320 3-203 (210)
17 2w5e_A Putative serine proteas 99.9 2.8E-22 9.6E-27 189.4 16.1 137 147-307 19-155 (163)
18 2w7s_A Serine protease SPLA; h 99.8 2.4E-20 8.2E-25 181.6 11.9 171 135-317 9-196 (200)
19 1agj_A Epidermolytic toxin A; 99.8 5.6E-20 1.9E-24 184.6 12.4 162 148-318 54-240 (242)
20 2vid_A Serine protease SPLB; h 99.8 4E-19 1.4E-23 173.0 15.4 173 135-318 9-201 (204)
21 2l97_A HTRA, putative serine p 99.8 1.6E-19 5.4E-24 165.3 6.7 124 300-434 2-128 (134)
22 2o8l_A V8 protease, taphylococ 99.8 1.2E-17 4.1E-22 171.0 21.4 159 148-319 33-210 (274)
23 2h5c_A Alpha-lytic protease; s 99.8 9.4E-18 3.2E-22 163.5 18.1 152 152-315 19-191 (198)
24 1wcz_A Glutamyl endopeptidase; 99.8 1.5E-17 5.3E-22 169.6 18.7 160 148-320 33-211 (268)
25 1qtf_A Exfoliative toxin B; se 99.7 1.3E-18 4.6E-23 175.2 7.9 147 147-312 46-216 (246)
26 3rle_A Golgi reassembly-stacki 99.7 5.5E-18 1.9E-22 166.7 11.8 152 352-579 15-169 (209)
27 1hpg_A Glutamic acid specific 99.7 3.1E-16 1.1E-20 151.5 17.7 156 149-315 12-182 (187)
28 3gsl_A Disks large homolog 4; 99.7 2.5E-16 8.4E-21 152.1 15.5 151 352-581 34-191 (196)
29 2oua_A Serine protease, protei 99.7 9.5E-16 3.3E-20 148.2 17.5 154 150-315 15-182 (188)
30 2qa9_E Streptogrisin-B; chymot 99.7 4.7E-16 1.6E-20 149.6 14.9 160 149-316 12-181 (185)
31 1p1d_A PDZ45, glutamate recept 99.7 1.6E-16 5.5E-21 154.4 9.8 148 352-580 35-195 (196)
32 2qt5_A Glutamate receptor-inte 99.6 1.2E-15 4.2E-20 148.4 14.5 151 352-582 32-197 (200)
33 2ea3_A Chymotrypsin; celloulom 99.6 2.7E-15 9.3E-20 145.0 16.1 151 150-315 16-176 (189)
34 3r0h_A INAD, inactivation-NO-a 99.6 4.8E-15 1.6E-19 144.7 13.8 143 353-579 45-195 (206)
35 2pfe_A Protease A, alkaline se 99.6 9.8E-15 3.3E-19 140.7 14.6 153 149-315 14-179 (186)
36 2sga_A Proteinase A; hydrolase 99.6 5.9E-15 2E-19 141.5 12.7 152 149-315 12-176 (181)
37 1mbm_A NSP4 proteinase, chymot 99.6 3.2E-15 1.1E-19 140.2 9.4 117 147-292 13-130 (198)
38 1w9e_A Syntenin 1; cell adhesi 99.6 3.1E-14 1.1E-18 134.5 14.4 144 327-576 15-162 (166)
39 1fxy_A Coagulation factor XA-t 99.5 4.7E-13 1.6E-17 132.7 17.7 186 133-319 6-224 (228)
40 1ton_A Tonin; hydrolase(serine 99.5 1.1E-12 3.9E-17 130.3 20.0 184 134-320 7-232 (235)
41 1pq7_A Trypsin; ultra-high res 99.5 4.6E-13 1.6E-17 132.3 16.8 183 135-317 8-222 (224)
42 2zch_P Prostate-specific antig 99.5 9.8E-13 3.3E-17 131.0 18.7 186 134-320 7-234 (237)
43 1npm_A Neuropsin; serine prote 99.5 8.9E-13 3.1E-17 130.4 18.1 181 134-317 7-222 (225)
44 1hj8_A Trypsin I; hydrolase, r 99.5 1E-12 3.5E-17 129.8 18.3 183 134-319 7-219 (222)
45 4i8h_A Cationic trypsin, beta- 99.5 9.7E-13 3.3E-17 129.6 18.0 184 134-320 7-221 (223)
46 3mfj_A Cationic trypsin; serin 99.5 1.4E-12 4.8E-17 128.8 18.9 182 135-319 8-220 (223)
47 1ao5_A Glandular kallikrein-13 99.5 1.3E-12 4.6E-17 130.0 18.3 183 134-319 7-233 (237)
48 1aut_C Activated protein C; se 99.5 1.2E-12 4E-17 131.6 17.9 187 134-320 7-239 (250)
49 1gvz_A Kallikrein-1E2; antigen 99.5 1.1E-12 3.8E-17 130.6 16.4 182 135-319 8-233 (237)
50 1lo6_A Kallikrein 6, HK6; seri 99.5 2.2E-12 7.7E-17 127.4 18.4 183 134-319 7-220 (223)
51 1mza_A Pro-granzyme K; apoptos 99.4 2.4E-12 8.1E-17 128.4 18.5 190 129-319 4-234 (240)
52 2bdg_A Kallikrein-4; serine pr 99.4 2.2E-12 7.7E-17 127.4 18.0 183 134-319 7-221 (223)
53 2qxi_A Kallikrein-7; S1 pocket 99.4 2E-12 6.8E-17 127.8 17.4 182 135-319 8-220 (224)
54 2psx_A Kallikrein-5; zinc inhi 99.4 2.4E-12 8.3E-17 127.4 17.3 183 134-319 7-223 (227)
55 1cgh_A Cathepsin G; inflammati 99.4 3.3E-12 1.1E-16 126.2 18.1 180 135-319 8-222 (224)
56 3s9c_A Vipera russelli protein 99.4 3.9E-12 1.3E-16 126.1 18.5 185 135-322 8-227 (234)
57 1t8o_A Chymotrypsin A; chymotr 99.4 4.8E-12 1.6E-16 126.8 18.9 195 124-319 12-242 (245)
58 1iau_A Granzyme B; hydrolase-h 99.4 4.8E-12 1.7E-16 125.2 18.6 167 148-319 26-224 (227)
59 1a7s_A Heparin binding protein 99.4 3.3E-12 1.1E-16 126.1 17.4 178 134-321 7-219 (225)
60 1sgf_A 7S NGF, nerve growth fa 99.4 1.7E-12 6E-17 129.5 15.3 190 128-320 4-237 (240)
61 1azz_A Collagenase; complex (s 99.4 1.9E-12 6.6E-17 128.1 15.3 184 134-319 7-222 (226)
62 1spj_A Kallikrein 1; serine pr 99.4 4.5E-12 1.5E-16 126.1 18.1 183 134-319 7-234 (238)
63 1fuj_A PR3, myeloblastin; hydr 99.4 3.8E-12 1.3E-16 125.2 17.3 161 148-318 26-219 (221)
64 1bru_P Elastase, PPE; serine p 99.4 7.6E-12 2.6E-16 125.0 19.6 185 135-319 8-238 (241)
65 1si5_H Scatter factor, hepatoc 99.4 1.1E-11 3.6E-16 123.8 20.4 183 138-320 10-227 (240)
66 3s69_A Thrombin-like enzyme de 99.4 5.6E-12 1.9E-16 124.8 18.2 186 135-321 8-226 (234)
67 2aiq_A Protein C activator; sn 99.4 4E-12 1.4E-16 126.1 17.2 183 135-321 8-223 (231)
68 4e7n_A Snake-venom thrombin-li 99.4 5.4E-12 1.8E-16 125.3 17.9 185 136-321 9-230 (238)
69 2xw9_A Complement factor D; im 99.4 5.7E-12 1.9E-16 124.6 17.9 182 136-318 9-226 (228)
70 2z7f_E Leukocyte elastase; ser 99.4 2.5E-12 8.5E-17 126.5 15.1 175 134-318 7-216 (218)
71 3gov_B MAsp-1; complement, ser 99.4 5.8E-12 2E-16 125.8 18.1 185 135-319 8-247 (251)
72 3fan_A Non-structural protein; 99.4 4.6E-13 1.6E-17 127.7 9.0 117 147-293 28-145 (213)
73 2f91_A Hepatopancreas trypsin; 99.4 8.9E-12 3E-16 124.1 18.6 183 135-317 8-234 (237)
74 2pzd_A Serine protease HTRA2; 99.4 5.3E-13 1.8E-17 117.8 8.5 97 322-433 1-103 (113)
75 1gvk_B Elastase 1, peptide inh 99.4 8.7E-12 3E-16 124.4 18.2 172 148-319 27-237 (240)
76 3h7t_A Group 3 allergen smipp- 99.4 4.3E-12 1.5E-16 125.5 15.7 184 135-320 8-229 (235)
77 3ncl_A Suppressor of tumorigen 99.4 9.3E-12 3.2E-16 123.8 18.2 185 134-318 7-238 (241)
78 2hlc_A Collagenase; serine pro 99.4 4.6E-12 1.6E-16 125.5 15.8 173 147-319 26-226 (230)
79 1eq9_A Chymotrypsin; FIRE ANT, 99.4 7.6E-12 2.6E-16 123.4 17.1 181 134-317 7-218 (222)
80 4ag1_A Chymase; hydrolase-de n 99.4 2E-11 6.8E-16 120.4 20.0 167 148-320 27-224 (226)
81 1orf_A Granzyme A; hydrolase-h 99.4 9.7E-12 3.3E-16 123.5 17.6 183 135-319 8-230 (234)
82 2asu_B Hepatocyte growth facto 99.4 1E-11 3.4E-16 123.5 17.6 182 138-319 8-225 (234)
83 3beu_A Trypsin, SGT; beta shee 99.4 1.3E-11 4.5E-16 121.5 18.2 182 133-319 6-221 (224)
84 1p3c_A Glutamyl-endopeptidase; 99.4 3.8E-12 1.3E-16 124.8 13.8 158 148-318 29-212 (215)
85 2zgc_A Granzyme M; serine prot 99.4 1.5E-11 5.2E-16 122.8 18.5 186 135-320 8-229 (240)
86 1elt_A Elastase; serine protei 99.4 8.5E-12 2.9E-16 124.1 16.5 169 149-317 28-234 (236)
87 2jkh_A Activated factor XA hea 99.4 6.4E-12 2.2E-16 125.3 15.5 187 134-320 7-233 (241)
88 2p3w_A Probable serine proteas 99.4 6.1E-13 2.1E-17 117.3 7.2 97 322-433 1-103 (112)
89 1euf_A Duodenase; serine prote 99.4 1.2E-11 4.3E-16 122.3 17.4 179 135-318 8-222 (227)
90 1ddj_A Plasminogen; catalytic 99.4 1.3E-11 4.6E-16 123.6 17.7 191 130-320 20-245 (247)
91 3tvj_B Mannan-binding lectin s 99.4 7.6E-12 2.6E-16 124.3 15.7 187 133-319 6-239 (242)
92 1ym0_A Fibrinotic enzyme compo 99.4 1.6E-11 5.6E-16 121.9 17.8 185 135-320 8-236 (238)
93 3rp2_A RAT MAST cell protease 99.4 2.1E-11 7.1E-16 120.0 18.2 165 148-318 27-222 (224)
94 2any_A Kininogenin, plasma kal 99.4 1.7E-11 5.9E-16 122.2 17.6 186 135-320 8-236 (241)
95 2qy0_B Complement C1R subcompo 99.4 4.1E-12 1.4E-16 126.6 13.0 186 132-319 5-238 (242)
96 1m9u_A Earthworm fibrinolytic 99.3 9E-12 3.1E-16 124.2 15.1 145 148-292 26-210 (241)
97 2r0l_A Hepatocyte growth facto 99.3 2.1E-11 7.3E-16 122.0 17.8 187 134-320 7-239 (248)
98 3bg8_A Coagulation factor XIA 99.3 1.7E-11 5.9E-16 122.0 16.9 184 135-318 8-234 (238)
99 3gyl_B Prostasin; ENAC, zymoge 99.3 1.8E-11 6.3E-16 123.1 17.2 186 134-319 7-241 (261)
100 3fzz_A Granzyme C; hydrolase, 99.3 2.5E-11 8.7E-16 119.6 17.7 167 148-319 27-225 (227)
101 2oq5_A Transmembrane protease, 99.3 4.9E-11 1.7E-15 118.2 19.8 185 134-318 7-229 (232)
102 2bdy_A Thrombin; thrombin, com 99.3 1.9E-11 6.4E-16 125.6 17.1 193 127-319 30-284 (289)
103 1rtf_B (TC)-T-PA, two chain ti 99.3 3E-11 1E-15 121.1 18.1 171 148-318 29-249 (252)
104 2wph_S Coagulation factor IXA 99.3 1.3E-11 4.6E-16 122.4 15.1 185 134-318 7-231 (235)
105 3rm2_H Thrombin heavy chain; s 99.3 1.8E-11 6.2E-16 122.8 16.1 186 134-319 7-254 (259)
106 3mhw_U Urokinase-type plasmino 99.3 2.8E-11 9.6E-16 120.6 16.9 171 148-318 28-244 (247)
107 3suz_A Amyloid beta A4 precurs 99.3 5.3E-13 1.8E-17 143.0 4.6 136 353-577 232-371 (388)
108 1fiw_A Beta-acrosin heavy chai 99.3 5E-11 1.7E-15 122.6 19.1 185 135-319 8-248 (290)
109 2bz6_H Blood coagulation facto 99.3 2.3E-11 7.8E-16 122.3 16.1 187 134-320 7-240 (254)
110 2olg_A Pro-phenoloxidase activ 99.3 2.7E-11 9.1E-16 123.5 16.8 169 148-316 50-273 (278)
111 2xkx_A Disks large homolog 4; 99.3 7.8E-12 2.7E-16 144.2 14.2 153 352-583 88-247 (721)
112 1pyt_D TC, PCPA-TC, chymotryps 99.3 2.4E-11 8.2E-16 122.1 16.1 171 148-318 40-248 (251)
113 1yc0_A Hepatocyte growth facto 99.3 2.9E-11 9.8E-16 123.8 16.7 193 127-319 35-273 (283)
114 2jde_A Urokinase-type plasmino 99.3 3.5E-11 1.2E-15 122.4 17.0 192 127-318 23-267 (276)
115 4dgj_A Enteropeptidase catalyt 99.3 2.2E-11 7.4E-16 120.7 14.8 183 135-317 8-232 (235)
116 2f9n_A Alpha I tryptase; serin 99.3 2.3E-11 7.7E-16 121.7 14.7 185 135-319 8-241 (245)
117 3h7o_A Group 3 allergen smipp- 99.3 1.6E-11 5.4E-16 121.0 12.1 169 150-320 27-226 (228)
118 1z8g_A Serine protease hepsin; 99.3 7.5E-11 2.6E-15 125.6 17.8 194 127-320 117-360 (372)
119 1fon_A Procarboxypeptidase A-S 99.3 1.4E-11 4.7E-16 122.9 11.3 172 148-319 25-237 (240)
120 1md8_A C1R complement serine p 99.3 3.5E-11 1.2E-15 126.1 14.1 191 127-319 89-327 (329)
121 1zjk_A Mannan-binding lectin s 99.2 6.5E-11 2.2E-15 127.3 15.1 193 127-319 161-400 (403)
122 2xkx_A Disks large homolog 4; 99.2 6.6E-11 2.3E-15 136.5 15.9 189 352-581 183-392 (721)
123 3f1s_B Vitamin K-dependent pro 99.2 5.7E-11 1.9E-15 121.7 13.7 182 138-320 63-276 (283)
124 4f4o_C Haptoglobin; globin fol 99.2 1.2E-10 3.9E-15 123.1 14.8 192 126-319 101-344 (347)
125 2vnt_A Urokinase-type plasmino 99.2 2.4E-10 8.3E-15 115.9 16.7 194 127-320 23-269 (276)
126 2b9l_A Prophenoloxidase activa 99.2 1.7E-10 5.9E-15 123.8 16.4 195 127-321 129-384 (394)
127 2i4s_A General secretion pathw 99.2 3.1E-11 1.1E-15 105.2 8.4 101 308-430 4-105 (105)
128 3cp7_A Alkaline serine proteas 99.2 3E-10 1E-14 112.0 16.4 162 148-319 20-215 (218)
129 1gpz_A Complement C1R componen 99.2 1.2E-10 4.1E-15 124.9 14.6 191 127-319 157-395 (399)
130 1elv_A Complement C1S componen 99.2 1.7E-10 5.7E-15 121.0 14.6 190 127-320 82-325 (333)
131 2xxl_A GRAM-positive specific 99.2 4.4E-10 1.5E-14 121.1 17.5 190 130-319 121-372 (408)
132 3h5c_B Vitamin K-dependent pro 99.2 2.1E-10 7.2E-15 119.2 14.3 181 137-318 103-315 (317)
133 3nxp_A Prethrombin-1; alloster 99.2 6.6E-11 2.3E-15 128.3 10.7 192 127-318 165-418 (424)
134 1zyo_A Serine protease; beta-b 99.1 5.6E-10 1.9E-14 107.4 14.5 150 148-314 26-185 (191)
135 3i18_A LMO2051 protein; alpha- 99.1 1E-10 3.5E-15 101.0 8.5 73 352-434 6-78 (100)
136 4dur_A Plasminogen, serine pro 99.1 7.1E-10 2.4E-14 128.4 16.5 194 127-320 561-789 (791)
137 2vz5_A TAX1-binding protein 3; 99.1 5.7E-11 2E-15 109.0 5.2 101 320-432 31-135 (139)
138 2kl1_A YLBL protein; structure 99.1 1.2E-10 4E-15 99.5 5.7 73 352-434 4-76 (94)
139 2kjp_A Uncharacterized protein 99.1 3.6E-11 1.2E-15 102.1 2.4 72 353-434 1-72 (91)
140 2i6v_A General secretion pathw 99.0 2.4E-10 8.2E-15 96.0 5.2 68 353-430 19-87 (87)
141 3id1_A Regulator of sigma E pr 99.0 2E-10 6.9E-15 98.2 4.7 71 355-435 4-77 (95)
142 2f83_A Coagulation factor XI; 99.0 1.3E-09 4.3E-14 123.9 11.4 191 127-317 387-620 (625)
143 1uit_A Human discs large 5 pro 99.0 1.7E-10 5.8E-15 102.3 3.2 90 319-424 7-104 (117)
144 2eaq_A LIM domain only protein 98.9 6.1E-10 2.1E-14 93.8 4.5 72 327-422 16-90 (90)
145 2xrc_A Human complement factor 98.9 5.1E-09 1.7E-13 117.5 12.5 191 127-319 321-555 (565)
146 1arb_A Achromobacter protease 98.9 1.5E-08 5E-13 103.1 14.7 131 148-294 33-213 (268)
147 1rrk_A Complement factor B; BB 98.9 3.1E-09 1.1E-13 116.9 10.5 184 138-321 225-491 (497)
148 3hrz_D Complement factor B; se 98.9 6.9E-09 2.4E-13 119.8 12.4 192 131-322 460-734 (741)
149 3cyy_A Tight junction protein 98.8 1.7E-09 5.9E-14 91.2 4.6 82 334-429 6-91 (92)
150 2w4f_A Protein LAP4; structura 98.8 6.5E-09 2.2E-13 88.6 7.6 82 327-423 13-95 (97)
151 2zpm_A Regulator of sigma E pr 98.8 2.3E-09 7.7E-14 90.4 4.4 68 354-432 5-73 (91)
152 2eeh_A PDZ domain-containing p 98.8 7.5E-09 2.6E-13 89.0 7.1 75 327-423 21-96 (100)
153 2fcf_A Multiple PDZ domain pro 98.8 4.4E-09 1.5E-13 90.8 5.6 82 327-422 15-100 (103)
154 2rcz_A Tight junction protein 98.8 3.4E-09 1.2E-13 86.9 4.5 77 331-421 1-81 (81)
155 2pkt_A PDZ and LIM domain prot 98.8 4.7E-09 1.6E-13 88.5 4.8 62 353-424 27-89 (91)
156 1x5q_A LAP4 protein; PDZ domai 98.8 1.1E-08 3.7E-13 89.5 7.2 83 327-424 25-108 (110)
157 3sfj_A TAX1-binding protein 3; 98.7 2.1E-08 7.3E-13 86.6 8.2 83 327-420 18-104 (104)
158 2l97_A HTRA, putative serine p 98.7 4.6E-08 1.6E-12 88.9 9.8 61 521-582 56-117 (134)
159 2odp_A Complement C2; C3/C5 co 98.7 7.5E-09 2.6E-13 114.3 5.5 157 138-294 234-458 (509)
160 2dls_A PDZ-rhogef, RHO guanine 98.7 3.2E-08 1.1E-12 83.9 8.1 59 353-422 29-88 (93)
161 1wh1_A KIAA1095 protein; PDZ d 98.7 4.2E-09 1.4E-13 94.4 2.6 80 327-426 31-112 (124)
162 1yph_C Chymotrypsin A, chain B 98.7 1E-07 3.6E-12 85.8 11.8 101 134-235 7-129 (131)
163 2iwq_A Multiple PDZ domain pro 98.7 1.7E-08 5.8E-13 90.4 6.4 82 327-422 35-120 (123)
164 4fgm_A Aminopeptidase N family 98.7 5.8E-08 2E-12 109.3 11.8 78 345-433 486-566 (597)
165 1uf1_A KIAA1526 protein; PDZ d 98.7 1.8E-08 6.2E-13 90.6 6.2 59 522-582 46-106 (128)
166 2v90_A PDZ domain-containing p 98.7 6E-09 2E-13 88.8 2.5 75 329-424 15-92 (96)
167 3rle_A Golgi reassembly-stacki 98.7 3.8E-08 1.3E-12 96.3 8.5 84 327-430 94-181 (209)
168 1qau_A Neuronal nitric oxide s 98.7 2.9E-08 9.8E-13 87.0 6.7 82 328-432 13-98 (112)
169 2yub_A LIMK-2, LIM domain kina 98.7 7.4E-09 2.5E-13 92.1 2.9 62 352-425 43-109 (118)
170 2pzd_A Serine protease HTRA2; 98.7 6.2E-08 2.1E-12 85.0 8.6 60 521-582 34-93 (113)
171 1uez_A KIAA1526 protein; PDZ d 98.6 1.9E-08 6.5E-13 86.5 5.1 73 328-422 21-94 (101)
172 2pa1_A PDZ and LIM domain prot 98.6 4.2E-08 1.4E-12 81.9 6.5 58 353-422 26-86 (87)
173 2edz_A PDZ domain-containing p 98.6 3.1E-09 1.1E-13 93.7 -0.7 68 352-429 37-105 (114)
174 3tsv_A Tight junction protein 98.6 3.9E-08 1.4E-12 88.1 6.3 61 352-422 50-113 (124)
175 1uf1_A KIAA1526 protein; PDZ d 98.6 1.8E-08 6.3E-13 90.6 3.9 70 353-433 46-116 (128)
176 3bpu_A Membrane-associated gua 98.6 9.5E-08 3.3E-12 79.9 7.9 60 352-422 26-87 (88)
177 2vsp_A PDZ domain-containing p 98.6 1.9E-08 6.6E-13 84.7 3.4 60 352-423 26-88 (91)
178 3i18_A LMO2051 protein; alpha- 98.6 1.1E-07 3.7E-12 81.8 8.1 62 521-583 6-68 (100)
179 2koj_A Partitioning defective 98.6 9.9E-08 3.4E-12 83.4 7.9 79 328-422 22-102 (111)
180 2h2b_A Tight junction protein 98.6 8.5E-08 2.9E-12 83.2 7.3 62 352-423 38-99 (107)
181 1ihj_A INAD; intermolecular di 98.6 5.7E-08 1.9E-12 82.9 5.9 61 352-422 36-98 (98)
182 1vb7_A PDZ and LIM domain 2; P 98.6 2.3E-08 7.8E-13 84.9 3.3 60 352-423 29-91 (94)
183 2p3w_A Probable serine proteas 98.6 9.9E-08 3.4E-12 83.6 7.4 60 521-582 34-93 (112)
184 2uzc_A Human pdlim5, PDZ and L 98.6 4.2E-08 1.4E-12 82.0 4.6 60 353-422 27-87 (88)
185 1nf3_C PAR-6B; semi-CRIB motif 98.6 1.6E-08 5.4E-13 91.1 2.0 81 328-422 42-126 (128)
186 2kjp_A Uncharacterized protein 98.6 3.4E-08 1.2E-12 83.6 3.9 59 523-582 2-61 (91)
187 2vwr_A Ligand of NUMB protein 98.6 1.1E-07 3.9E-12 80.6 7.2 61 352-422 28-90 (95)
188 2jil_A GRIP1 protein, glutamat 98.5 2.7E-08 9.3E-13 84.8 3.1 60 352-423 31-94 (97)
189 2kom_A Partitioning defective 98.5 1.3E-07 4.5E-12 84.2 7.7 63 352-422 57-121 (121)
190 2he4_A Na(+)/H(+) exchange reg 98.5 6.3E-08 2.2E-12 81.3 5.2 59 352-422 27-88 (90)
191 2opg_A Multiple PDZ domain pro 98.5 1.7E-07 5.7E-12 80.0 7.8 62 353-424 30-93 (98)
192 3stj_A Protease DEGQ; serine p 98.5 1.4E-07 4.7E-12 99.4 8.8 63 521-583 262-325 (345)
193 2awx_A Synapse associated prot 98.5 8.9E-08 3E-12 82.9 6.1 70 352-431 32-103 (105)
194 2kl1_A YLBL protein; structure 98.5 1.1E-07 3.8E-12 80.8 6.4 61 521-582 4-65 (94)
195 3id1_A Regulator of sigma E pr 98.5 1E-07 3.5E-12 81.3 6.1 57 524-580 4-61 (95)
196 2i6v_A General secretion pathw 98.5 9.7E-08 3.3E-12 79.9 5.8 61 522-582 19-80 (87)
197 2hga_A Conserved protein MTH13 98.5 1.3E-07 4.3E-12 85.0 6.9 67 352-432 24-90 (125)
198 1v5l_A PDZ and LIM domain 3; a 98.5 3.6E-08 1.2E-12 85.2 3.0 58 353-422 29-89 (103)
199 1m5z_A GRIP, AMPA receptor int 98.5 1.5E-07 5E-12 79.1 6.8 58 353-420 32-90 (91)
200 4amh_A Disks large homolog 1; 98.5 1.5E-07 5.2E-12 81.8 7.0 70 352-431 31-103 (106)
201 1rgw_A ZAsp protein; PDZ, cyph 98.5 8.5E-08 2.9E-12 79.5 5.1 61 352-422 24-85 (85)
202 1n7e_A AMPA receptor interacti 98.5 1.8E-07 6.3E-12 79.7 7.3 61 353-423 30-92 (97)
203 1wf7_A Enigma homologue protei 98.5 2.1E-08 7E-13 86.7 1.2 68 353-430 29-97 (103)
204 1x5n_A Harmonin; PDZ domain, u 98.5 3.1E-08 1E-12 87.2 2.2 76 329-426 28-105 (114)
205 2jxo_A Ezrin-radixin-moesin-bi 98.5 3E-08 1E-12 84.7 1.7 60 352-422 32-94 (98)
206 2rcz_A Tight junction protein 98.5 8.9E-08 3E-12 78.3 4.4 58 522-580 21-81 (81)
207 2pa1_A PDZ and LIM domain prot 98.5 1.3E-07 4.6E-12 78.8 5.6 59 522-581 26-86 (87)
208 2f5y_A Regulator of G-protein 98.5 2E-07 6.7E-12 78.6 6.6 62 353-424 24-86 (91)
209 2q3g_A PDZ and LIM domain prot 98.5 1.3E-07 4.6E-12 79.1 5.6 61 352-422 26-87 (89)
210 1b8q_A Protein (neuronal nitri 98.5 4.8E-08 1.6E-12 87.7 2.9 68 353-431 33-104 (127)
211 2eeg_A PDZ and LIM domain prot 98.5 9.7E-08 3.3E-12 80.9 4.7 61 352-422 31-92 (94)
212 2qkv_A Inactivation-NO-after-p 98.5 2.9E-07 1E-11 78.4 7.3 59 352-420 30-90 (96)
213 3khf_A Microtubule-associated 98.5 6.5E-08 2.2E-12 82.8 3.1 59 354-422 35-94 (99)
214 2zpm_A Regulator of sigma E pr 98.5 1.4E-07 4.9E-12 79.3 5.1 59 524-582 6-64 (91)
215 2eaq_A LIM domain only protein 98.4 1.1E-07 3.7E-12 79.8 4.4 61 521-581 27-90 (90)
216 1wi2_A Riken cDNA 2700099C19; 98.4 1.4E-07 4.9E-12 81.5 5.2 71 328-422 27-100 (104)
217 2vsp_A PDZ domain-containing p 98.4 1.5E-07 5.3E-12 79.2 5.2 60 521-581 26-87 (91)
218 2fe5_A Presynaptic protein SAP 98.4 2.3E-07 7.7E-12 78.4 6.3 61 352-422 32-94 (94)
219 2ego_A General receptor for ph 98.4 2.7E-07 9.2E-12 78.5 6.6 56 353-420 37-95 (96)
220 2i04_A Membrane-associated gua 98.4 2.5E-07 8.5E-12 76.7 6.1 60 352-419 24-85 (85)
221 3axa_A Afadin, nectin-3, prote 98.4 4.7E-07 1.6E-11 78.4 7.8 61 352-422 37-99 (106)
222 2ejy_A 55 kDa erythrocyte memb 98.4 2.5E-07 8.6E-12 79.2 6.0 56 353-420 36-95 (97)
223 3r68_A Na(+)/H(+) exchange reg 98.4 2.1E-07 7.2E-12 78.8 5.5 59 353-423 29-90 (95)
224 3ngh_A PDZ domain-containing p 98.4 1.3E-07 4.5E-12 81.9 4.3 61 352-422 25-86 (106)
225 2la8_A Inactivation-NO-after-p 98.4 3.4E-07 1.2E-11 79.6 6.8 60 352-421 24-85 (106)
226 2e7k_A Maguk P55 subfamily mem 98.4 2E-07 6.9E-12 78.6 5.1 68 327-420 17-87 (91)
227 1wif_A RSGI RUH-020, riken cDN 98.4 1.5E-07 5.1E-12 84.6 4.5 58 353-420 49-110 (126)
228 2jre_A C60-1 PDZ domain peptid 98.4 1.3E-07 4.5E-12 82.2 4.0 62 352-423 43-106 (108)
229 2pkt_A PDZ and LIM domain prot 98.4 1.8E-07 6E-12 78.7 4.6 59 522-581 27-87 (91)
230 1um1_A KIAA1849 protein, RSGI 98.4 4.5E-08 1.5E-12 85.5 0.9 68 352-429 35-104 (110)
231 2jik_A Synaptojanin-2 binding 98.4 3.6E-07 1.2E-11 78.4 6.5 61 352-422 36-98 (101)
232 3mmg_A Nuclear inclusion prote 98.4 2.8E-05 9.4E-10 76.3 20.2 153 153-318 32-194 (241)
233 1tp5_A Presynaptic density pro 98.4 4.3E-07 1.5E-11 80.3 6.9 60 353-422 38-99 (119)
234 3i4w_A Disks large homolog 4; 98.4 4E-07 1.4E-11 78.4 6.4 60 353-422 35-96 (104)
235 2jxo_A Ezrin-radixin-moesin-bi 98.4 1.9E-07 6.6E-12 79.6 4.3 60 522-581 33-94 (98)
236 2uzc_A Human pdlim5, PDZ and L 98.4 3.2E-07 1.1E-11 76.6 5.6 60 521-581 26-87 (88)
237 2iwn_A Multiple PDZ domain pro 98.4 3.6E-07 1.2E-11 77.4 6.0 78 328-422 15-94 (97)
238 2r4h_A Membrane-associated gua 98.4 3.9E-07 1.3E-11 80.0 6.2 62 352-423 48-111 (112)
239 2qbw_A PDZ-fibronectin fusion 98.4 7.8E-07 2.7E-11 85.4 9.0 72 352-433 23-97 (195)
240 2v90_A PDZ domain-containing p 98.4 4.8E-07 1.6E-11 76.8 6.6 60 521-581 29-90 (96)
241 1ueq_A Membrane associated gua 98.4 2.6E-07 8.9E-12 82.5 5.1 62 352-421 43-106 (123)
242 2i1n_A Discs, large homolog 3; 98.4 1.8E-07 6.1E-12 80.4 3.9 62 352-423 33-96 (102)
243 2djt_A Unnamed protein product 98.4 2.5E-07 8.7E-12 79.8 4.9 61 352-422 37-99 (104)
244 1d5g_A Human phosphatase HPTP1 98.4 4.6E-07 1.6E-11 76.9 6.3 61 352-422 32-94 (96)
245 2o2t_A Multiple PDZ domain pro 98.4 4.5E-08 1.5E-12 86.5 -0.0 61 352-424 48-113 (117)
246 1te0_A Protease DEGS; two doma 98.4 4.1E-07 1.4E-11 94.6 7.2 62 521-582 243-305 (318)
247 2yt7_A Amyloid beta A4 precurs 98.4 4.5E-07 1.5E-11 77.9 6.2 74 328-420 21-98 (101)
248 2dmz_A INAD-like protein; PDZ 98.4 2.2E-07 7.6E-12 83.5 4.5 78 328-423 27-108 (129)
249 1y7n_A Amyloid beta A4 precurs 98.4 2.7E-07 9.3E-12 77.8 4.7 68 339-420 19-89 (90)
250 1v5q_A GRIP1 homolog, glutamat 98.4 2E-07 6.7E-12 83.1 4.0 60 353-422 45-108 (122)
251 1uep_A Membrane associated gua 98.4 1.1E-07 3.7E-12 82.1 2.2 63 352-422 33-97 (103)
252 3cyy_A Tight junction protein 98.4 5.9E-07 2E-11 75.5 6.6 60 522-582 23-85 (92)
253 1mfg_A ERB-B2 interacting prot 98.4 5.9E-07 2E-11 76.1 6.6 60 352-421 34-93 (95)
254 2he4_A Na(+)/H(+) exchange reg 98.4 5E-07 1.7E-11 75.8 6.1 60 521-581 27-88 (90)
255 1vb7_A PDZ and LIM domain 2; P 98.3 2.5E-07 8.5E-12 78.4 4.2 60 521-581 29-90 (94)
256 2i4s_A General secretion pathw 98.3 4E-07 1.4E-11 79.0 5.5 60 523-582 38-98 (105)
257 1va8_A Maguk P55 subfamily mem 98.3 3.1E-07 1.1E-11 80.7 4.9 60 352-423 47-110 (113)
258 1wh1_A KIAA1095 protein; PDZ d 98.3 2.6E-07 9.1E-12 82.5 4.5 61 521-581 47-108 (124)
259 1ihj_A INAD; intermolecular di 98.3 4.3E-07 1.5E-11 77.3 5.6 60 521-581 36-98 (98)
260 1ujv_A Membrane associated gua 98.3 7.4E-07 2.5E-11 75.9 7.0 58 353-422 32-92 (96)
261 2vz5_A TAX1-binding protein 3; 98.3 5.4E-07 1.8E-11 82.3 6.2 63 521-583 63-127 (139)
262 2pka_B Kallikrein A; serine pr 98.3 3.6E-06 1.2E-10 77.6 11.8 125 194-319 6-148 (152)
263 2jil_A GRIP1 protein, glutamat 98.3 4.5E-07 1.5E-11 77.1 5.1 60 521-581 31-93 (97)
264 2qg1_A Multiple PDZ domain pro 98.3 6.4E-07 2.2E-11 75.4 6.0 61 352-422 28-90 (92)
265 2d90_A PDZ domain containing p 98.3 3.9E-07 1.3E-11 78.4 4.7 61 352-422 29-90 (102)
266 2kv8_A RGS12, regulator of G-p 98.3 3.2E-07 1.1E-11 75.7 4.0 58 353-420 23-81 (83)
267 2q9v_A Membrane-associated gua 98.3 1.9E-07 6.5E-12 78.3 2.7 61 353-421 27-89 (90)
268 3qik_A Phosphatidylinositol 3, 98.3 3.8E-07 1.3E-11 78.2 4.4 57 352-418 38-98 (101)
269 1kwa_A Hcask/LIN-2 protein; PD 98.3 6.3E-07 2.1E-11 75.1 5.7 59 522-581 25-86 (88)
270 2dlu_A INAD-like protein; PDZ 98.3 8.2E-07 2.8E-11 77.5 6.7 60 353-422 38-99 (111)
271 2fcf_A Multiple PDZ domain pro 98.3 6E-07 2.1E-11 77.2 5.7 60 521-581 38-100 (103)
272 2fne_A Multiple PDZ domain pro 98.3 3.2E-07 1.1E-11 81.2 4.0 61 353-423 53-115 (117)
273 1v5l_A PDZ and LIM domain 3; a 98.3 4.6E-07 1.6E-11 78.1 4.9 60 522-582 29-90 (103)
274 2g5m_B Neurabin-2; spinophilin 98.3 1.1E-07 3.7E-12 83.4 1.0 66 352-427 34-101 (113)
275 3pv2_A DEGQ; trypsin fold, PDZ 98.3 1.5E-06 5.1E-11 94.7 10.1 62 522-583 282-344 (451)
276 1q7x_A PDZ2B domain of PTP-BAS 98.3 6E-07 2.1E-11 78.0 5.6 62 352-423 41-104 (108)
277 3kzd_A TIAM-1, T-lymphoma inva 98.3 8.7E-07 3E-11 75.3 6.3 51 328-388 20-71 (94)
278 2byg_A Channel associated prot 98.3 3.7E-07 1.3E-11 80.8 4.2 61 352-422 53-115 (117)
279 1kwa_A Hcask/LIN-2 protein; PD 98.3 6.5E-07 2.2E-11 75.0 5.3 58 353-422 25-86 (88)
280 1wfg_A Regulating synaptic mem 98.3 6.5E-07 2.2E-11 80.9 5.7 62 353-422 65-128 (131)
281 1ueq_A Membrane associated gua 98.3 7.1E-07 2.4E-11 79.6 5.7 66 521-586 43-112 (123)
282 3nfk_A Tyrosine-protein phosph 98.3 6.8E-07 2.3E-11 77.5 5.3 60 353-420 43-107 (107)
283 1rgw_A ZAsp protein; PDZ, cyph 98.3 7E-07 2.4E-11 73.9 5.1 59 521-580 24-84 (85)
284 2yub_A LIMK-2, LIM domain kina 98.3 6.6E-07 2.2E-11 79.4 5.2 60 521-581 43-106 (118)
285 3tsv_A Tight junction protein 98.3 8.6E-07 3E-11 79.3 6.0 61 521-581 50-113 (124)
286 1q3o_A Shank1; PDZ, GKAP, pept 98.3 6.8E-07 2.3E-11 77.8 5.2 56 353-420 45-103 (109)
287 2kjd_A Sodium/hydrogen exchang 98.3 5.5E-07 1.9E-11 80.7 4.7 63 352-425 32-97 (128)
288 1g9o_A NHE-RF; PDZ domain, com 98.3 6.5E-07 2.2E-11 75.1 4.8 60 522-581 27-88 (91)
289 2iwo_A Multiple PDZ domain pro 98.3 2.4E-07 8.2E-12 82.4 2.1 62 353-424 53-116 (120)
290 2i04_A Membrane-associated gua 98.3 1.5E-06 5E-11 72.0 6.8 58 521-578 24-85 (85)
291 2daz_A INAD-like protein; PDZ 98.3 1.3E-06 4.5E-11 77.9 6.9 61 353-423 51-113 (124)
292 1wha_A KIAA0147 protein, scrib 98.3 4.6E-07 1.6E-11 78.4 3.8 61 352-422 37-99 (105)
293 3bpu_A Membrane-associated gua 98.3 9.7E-07 3.3E-11 73.6 5.6 59 521-581 26-87 (88)
294 3cbz_A Dishevelled-2; PDZ doma 98.3 9.5E-07 3.2E-11 76.9 5.8 61 521-581 32-97 (108)
295 2kpk_A Membrane-associated gua 98.3 9.2E-07 3.1E-11 79.6 5.8 61 353-421 43-105 (129)
296 2q3g_A PDZ and LIM domain prot 98.3 7.3E-07 2.5E-11 74.6 4.8 60 521-581 26-87 (89)
297 1ujd_A KIAA0559 protein; PDZ d 98.2 5.2E-07 1.8E-11 79.7 4.1 61 353-423 49-111 (117)
298 1lcy_A HTRA2 serine protease; 98.2 2.2E-06 7.5E-11 89.4 9.4 61 521-583 255-315 (325)
299 2vsv_A Rhophilin-2; scaffold p 98.2 1.4E-06 4.9E-11 76.1 6.7 58 522-579 44-103 (109)
300 3cbz_A Dishevelled-2; PDZ doma 98.2 4.8E-07 1.6E-11 78.8 3.5 61 352-422 32-97 (108)
301 2iwq_A Multiple PDZ domain pro 98.2 2.2E-06 7.4E-11 76.6 7.7 59 521-580 58-119 (123)
302 2vsv_A Rhophilin-2; scaffold p 98.2 8.5E-07 2.9E-11 77.6 5.0 58 353-421 44-104 (109)
303 3khf_A Microtubule-associated 98.2 1.3E-06 4.5E-11 74.5 6.1 58 523-581 35-94 (99)
304 3sfj_A TAX1-binding protein 3; 98.2 1.6E-06 5.5E-11 74.6 6.6 59 521-579 44-104 (104)
305 2kom_A Partitioning defective 98.2 1.3E-06 4.5E-11 77.7 6.2 60 521-580 57-120 (121)
306 1wf8_A Neurabin-I; PDZ domain, 98.2 8.9E-07 3.1E-11 76.8 5.0 61 352-422 39-101 (107)
307 1uep_A Membrane associated gua 98.2 8.3E-07 2.8E-11 76.5 4.7 61 521-581 33-97 (103)
308 2ejy_A 55 kDa erythrocyte memb 98.2 1.1E-06 3.6E-11 75.3 5.3 58 521-579 35-95 (97)
309 1qau_A Neuronal nitric oxide s 98.2 1.5E-06 5.1E-11 75.9 6.4 61 521-581 25-88 (112)
310 2hga_A Conserved protein MTH13 98.2 2.7E-06 9.2E-11 76.2 8.2 63 521-585 24-87 (125)
311 1wfv_A Membrane associated gua 98.2 3.4E-07 1.1E-11 78.7 2.2 60 353-422 36-97 (103)
312 2edz_A PDZ domain-containing p 98.2 1E-06 3.4E-11 77.4 5.3 59 521-580 37-97 (114)
313 2eno_A Synaptojanin-2-binding 98.2 8.9E-07 3.1E-11 78.5 5.0 61 352-422 46-108 (120)
314 2koj_A Partitioning defective 98.2 1E-06 3.5E-11 76.8 5.3 64 521-584 38-105 (111)
315 1v5q_A GRIP1 homolog, glutamat 98.2 1E-06 3.5E-11 78.5 5.2 60 522-581 45-108 (122)
316 4a8c_A Periplasmic PH-dependen 98.2 2.8E-06 9.6E-11 92.2 9.7 63 521-583 262-325 (436)
317 3r68_A Na(+)/H(+) exchange reg 98.2 1.1E-06 3.8E-11 74.3 5.2 60 522-581 29-90 (95)
318 1n7t_A 99-MER peptide of densi 98.2 1.1E-06 3.9E-11 75.5 5.3 60 352-421 42-101 (103)
319 2eeg_A PDZ and LIM domain prot 98.2 1.3E-06 4.3E-11 74.0 5.4 60 521-581 31-92 (94)
320 2yt7_A Amyloid beta A4 precurs 98.2 2.6E-06 8.9E-11 73.1 7.4 58 522-579 37-98 (101)
321 2w4f_A Protein LAP4; structura 98.2 1.3E-06 4.5E-11 74.1 5.4 62 521-582 33-95 (97)
322 1whd_A RGS3, regulator of G-pr 98.2 9E-07 3.1E-11 75.9 4.4 59 353-421 36-95 (100)
323 1g9o_A NHE-RF; PDZ domain, com 98.2 8.6E-07 2.9E-11 74.4 4.2 37 352-388 26-63 (91)
324 1wi2_A Riken cDNA 2700099C19; 98.2 2E-06 6.8E-11 74.2 6.5 58 521-580 40-99 (104)
325 1d5g_A Human phosphatase HPTP1 98.2 2.4E-06 8.2E-11 72.4 6.9 60 521-581 32-94 (96)
326 3ngh_A PDZ domain-containing p 98.2 8.3E-07 2.8E-11 76.8 4.1 59 521-580 25-85 (106)
327 2ehr_A INAD-like protein; PDZ 98.2 1.5E-06 5.2E-11 76.6 5.8 61 352-422 49-111 (117)
328 2byg_A Channel associated prot 98.2 1.5E-06 5.3E-11 76.8 5.8 61 521-582 53-116 (117)
329 2fne_A Multiple PDZ domain pro 98.2 1.6E-06 5.6E-11 76.6 5.9 60 522-582 53-115 (117)
330 1n7e_A AMPA receptor interacti 98.2 2.4E-06 8.2E-11 72.6 6.6 59 522-581 30-91 (97)
331 1uew_A Membrane associated gua 98.2 2.1E-06 7.3E-11 75.3 6.4 59 523-582 44-105 (114)
332 2eeh_A PDZ domain-containing p 98.2 1.6E-06 5.6E-11 74.1 5.6 59 521-581 35-95 (100)
333 2d90_A PDZ domain containing p 98.2 2.3E-06 8E-11 73.4 6.6 59 521-580 29-89 (102)
334 2edv_A FERM and PDZ domain-con 98.2 7.8E-07 2.7E-11 75.7 3.5 60 352-421 30-89 (96)
335 2dm8_A INAD-like protein; PDZ 98.2 1.1E-06 3.6E-11 77.4 4.5 61 353-423 43-105 (116)
336 1wfg_A Regulating synaptic mem 98.2 7.8E-06 2.7E-10 73.7 10.3 59 522-580 65-127 (131)
337 2kv8_A RGS12, regulator of G-p 98.2 1.4E-06 4.8E-11 71.8 4.9 57 522-579 23-81 (83)
338 2jre_A C60-1 PDZ domain peptid 98.2 1.7E-06 5.7E-11 75.1 5.6 60 521-581 43-105 (108)
339 1uew_A Membrane associated gua 98.2 1.2E-06 4E-11 77.0 4.6 57 354-422 44-104 (114)
340 1wi4_A Synip, syntaxin binding 98.2 1.6E-06 5.6E-11 75.6 5.4 60 522-581 41-106 (109)
341 2ego_A General receptor for ph 98.2 2.5E-06 8.7E-11 72.4 6.5 58 521-579 36-95 (96)
342 1vae_A Rhophilin 2, rhophilin, 98.2 1.4E-06 4.8E-11 76.4 5.0 58 522-579 36-95 (111)
343 2f5y_A Regulator of G-protein 98.2 2.5E-06 8.5E-11 71.7 6.3 60 522-582 24-85 (91)
344 1v62_A KIAA1719 protein; struc 98.2 6.8E-07 2.3E-11 79.0 2.9 57 354-422 43-103 (117)
345 2o2t_A Multiple PDZ domain pro 98.2 1.6E-06 5.6E-11 76.3 5.3 60 521-581 48-111 (117)
346 2djt_A Unnamed protein product 98.2 2.3E-06 7.7E-11 73.7 6.0 60 521-581 37-99 (104)
347 2yuy_A RHO GTPase activating p 98.2 2.8E-07 9.7E-12 82.6 0.2 59 352-422 60-121 (126)
348 1x5q_A LAP4 protein; PDZ domai 98.1 2.5E-06 8.5E-11 74.3 6.2 60 521-581 45-106 (110)
349 2kjd_A Sodium/hydrogen exchang 98.1 1.4E-06 4.9E-11 77.9 4.8 60 522-581 33-94 (128)
350 3e17_A Tight junction protein 98.1 6.7E-07 2.3E-11 74.9 2.4 62 345-419 14-79 (88)
351 3qe1_A Sorting nexin-27, G pro 98.1 1.4E-06 4.8E-11 75.4 4.6 57 354-422 44-103 (107)
352 1fc6_A Photosystem II D1 prote 98.1 8.1E-06 2.8E-10 87.2 11.4 72 352-432 98-173 (388)
353 3o46_A Maguk P55 subfamily mem 98.1 2.7E-06 9.3E-11 71.7 6.2 60 521-581 27-89 (93)
354 1wf7_A Enigma homologue protei 98.1 1.4E-06 5E-11 74.9 4.5 59 522-581 29-89 (103)
355 1wg6_A Hypothetical protein (r 98.1 7.4E-07 2.5E-11 80.0 2.7 62 353-422 55-123 (127)
356 2fe5_A Presynaptic protein SAP 98.1 3.2E-06 1.1E-10 71.2 6.4 59 521-580 32-93 (94)
357 2r4h_A Membrane-associated gua 98.1 4.2E-06 1.4E-10 73.2 7.4 61 521-582 48-111 (112)
358 3gsl_A Disks large homolog 4; 98.1 1.3E-06 4.5E-11 83.4 4.4 61 353-425 130-194 (196)
359 1wha_A KIAA0147 protein, scrib 98.1 2.6E-06 8.8E-11 73.6 5.8 59 521-580 37-98 (105)
360 1b8q_A Protein (neuronal nitri 98.1 1.6E-06 5.4E-11 77.7 4.5 62 522-583 33-97 (127)
361 2dkr_A LIN-7 homolog B; LIN-7B 98.1 2E-06 6.8E-11 72.4 4.9 60 352-421 29-90 (93)
362 3l4f_D SH3 and multiple ankyri 98.1 2.5E-06 8.6E-11 77.1 5.9 60 353-422 65-125 (132)
363 2db5_A INAD-like protein; PDZ 98.1 8.4E-07 2.9E-11 79.6 2.7 57 353-421 54-115 (128)
364 1wi4_A Synip, syntaxin binding 98.1 7.8E-07 2.7E-11 77.7 2.4 60 353-422 41-106 (109)
365 1x6d_A Interleukin-16; PDZ dom 98.1 3.6E-07 1.2E-11 80.9 0.2 63 352-423 41-105 (119)
366 1wif_A RSGI RUH-020, riken cDN 98.1 2.7E-06 9.3E-11 76.3 5.9 58 522-579 49-110 (126)
367 2e7k_A Maguk P55 subfamily mem 98.1 2.3E-06 8E-11 72.0 5.2 58 521-579 28-87 (91)
368 3k1r_A Harmonin; protein-prote 98.1 1.7E-06 6E-11 83.2 5.0 58 352-422 109-169 (192)
369 1uju_A Scribble; PDZ domain, c 98.1 7.7E-07 2.6E-11 77.7 2.2 60 352-421 43-104 (111)
370 3qik_A Phosphatidylinositol 3, 98.1 3.1E-06 1.1E-10 72.5 5.8 57 521-577 38-98 (101)
371 2q9v_A Membrane-associated gua 98.1 1.8E-06 6.1E-11 72.3 4.3 58 522-579 27-88 (90)
372 3b76_A E3 ubiquitin-protein li 98.1 1.8E-06 6.1E-11 76.6 4.4 59 352-420 52-112 (118)
373 2dls_A PDZ-rhogef, RHO guanine 98.1 4.2E-06 1.4E-10 70.6 6.5 59 521-581 28-88 (93)
374 1qav_A Alpha-1 syntrophin (res 98.1 3.4E-06 1.2E-10 70.5 5.9 57 353-419 30-88 (90)
375 2gzv_A PRKCA-binding protein; 98.1 2.9E-06 1E-10 74.6 5.7 70 327-419 35-108 (114)
376 1ujd_A KIAA0559 protein; PDZ d 98.1 2.2E-06 7.5E-11 75.7 4.9 60 522-582 49-111 (117)
377 2dmz_A INAD-like protein; PDZ 98.1 2.7E-06 9.1E-11 76.3 5.4 60 521-581 45-107 (129)
378 2edp_A Fragment, shroom family 98.1 2.4E-06 8.1E-11 73.2 4.9 59 353-422 35-95 (100)
379 2i1n_A Discs, large homolog 3; 98.1 3E-06 1E-10 72.6 5.5 60 521-581 33-95 (102)
380 2d92_A INAD-like protein; PDZ 98.1 3.1E-06 1.1E-10 73.6 5.6 59 521-579 43-104 (108)
381 2opg_A Multiple PDZ domain pro 98.1 4.1E-06 1.4E-10 71.2 6.3 59 522-581 30-91 (98)
382 2csj_A TJP2 protein; PDZ domai 98.1 1.7E-06 5.9E-11 76.3 4.1 61 352-422 45-105 (117)
383 1va8_A Maguk P55 subfamily mem 98.1 3.7E-06 1.3E-10 73.8 6.1 60 521-581 47-109 (113)
384 1ujv_A Membrane associated gua 98.1 5.6E-06 1.9E-10 70.4 7.0 58 522-581 32-92 (96)
385 2eei_A PDZ domain-containing p 98.1 1.2E-06 4.1E-11 75.7 2.9 61 352-422 31-92 (106)
386 2jik_A Synaptojanin-2 binding 98.1 3.2E-06 1.1E-10 72.4 5.4 60 521-581 36-98 (101)
387 1x6d_A Interleukin-16; PDZ dom 98.1 3E-06 1E-10 74.9 5.2 61 521-581 41-104 (119)
388 2kpk_A Membrane-associated gua 98.1 3.7E-06 1.3E-10 75.5 5.9 61 522-582 43-107 (129)
389 2h2b_A Tight junction protein 98.1 3.8E-06 1.3E-10 72.7 5.7 61 521-582 38-99 (107)
390 1uhp_A Hypothetical protein KI 98.1 4.2E-06 1.4E-10 72.5 6.0 60 352-421 40-101 (107)
391 2d8i_A T-cell lymphoma invasio 98.1 1.9E-06 6.6E-11 75.9 3.9 70 330-421 31-101 (114)
392 1v62_A KIAA1719 protein; struc 98.1 3.7E-06 1.3E-10 74.3 5.7 61 522-583 42-105 (117)
393 1q3o_A Shank1; PDZ, GKAP, pept 98.1 4.1E-06 1.4E-10 72.8 5.9 57 522-579 45-103 (109)
394 1whd_A RGS3, regulator of G-pr 98.1 2.1E-06 7.3E-11 73.5 4.0 58 522-580 36-95 (100)
395 2vwr_A Ligand of NUMB protein 98.1 2.4E-06 8.2E-11 72.3 4.3 61 521-582 28-91 (95)
396 2yuy_A RHO GTPase activating p 98.1 1.4E-06 4.8E-11 78.0 2.9 60 521-581 60-121 (126)
397 2awx_A Synapse associated prot 98.1 5.2E-06 1.8E-10 71.6 6.3 61 521-582 32-95 (105)
398 1vae_A Rhophilin 2, rhophilin, 98.1 1E-06 3.5E-11 77.3 1.9 56 353-419 36-94 (111)
399 1y7n_A Amyloid beta A4 precurs 98.1 4.9E-06 1.7E-10 70.0 6.0 54 525-579 34-89 (90)
400 1uez_A KIAA1526 protein; PDZ d 98.1 2.2E-06 7.6E-11 73.4 3.9 60 521-581 34-94 (101)
401 3o46_A Maguk P55 subfamily mem 98.1 2.2E-06 7.5E-11 72.3 3.8 59 352-422 27-89 (93)
402 1uit_A Human discs large 5 pro 98.1 3E-06 1E-10 74.7 4.8 62 521-582 41-103 (117)
403 2qt5_A Glutamate receptor-inte 98.1 2.3E-06 7.7E-11 82.6 4.3 62 352-425 134-199 (200)
404 3tsz_A Tight junction protein 98.0 2.3E-06 7.8E-11 91.5 4.5 61 352-422 30-93 (391)
405 1q7x_A PDZ2B domain of PTP-BAS 98.0 3.6E-06 1.2E-10 73.0 5.0 60 521-581 41-103 (108)
406 2iwn_A Multiple PDZ domain pro 98.0 5.5E-06 1.9E-10 70.0 6.0 60 521-581 32-94 (97)
407 2dm8_A INAD-like protein; PDZ 98.0 3.8E-06 1.3E-10 73.8 5.1 61 522-583 43-106 (116)
408 1m5z_A GRIP, AMPA receptor int 98.0 7E-06 2.4E-10 68.7 6.5 58 521-579 31-90 (91)
409 2z17_A Pleckstrin homology SEC 98.0 1.8E-06 6E-11 74.5 2.9 73 329-417 28-103 (104)
410 1i16_A Interleukin 16, LCF; cy 98.0 4.7E-06 1.6E-10 75.0 5.8 60 521-580 56-118 (130)
411 2qg1_A Multiple PDZ domain pro 98.0 4.5E-06 1.5E-10 70.1 5.2 60 521-581 28-90 (92)
412 1nf3_C PAR-6B; semi-CRIB motif 98.0 5.5E-06 1.9E-10 74.3 6.1 59 522-581 65-126 (128)
413 4amh_A Disks large homolog 1; 98.0 7.1E-06 2.4E-10 71.1 6.6 59 521-580 31-92 (106)
414 1mfg_A ERB-B2 interacting prot 98.0 9.8E-06 3.3E-10 68.4 7.2 57 521-579 34-92 (95)
415 3e17_A Tight junction protein 98.0 7.4E-06 2.5E-10 68.5 6.2 57 522-579 21-80 (88)
416 3qe1_A Sorting nexin-27, G pro 98.0 7.2E-06 2.5E-10 70.9 6.4 57 523-580 44-102 (107)
417 3axa_A Afadin, nectin-3, prote 98.0 7.8E-06 2.7E-10 70.6 6.6 61 521-582 37-100 (106)
418 2db5_A INAD-like protein; PDZ 98.0 5.8E-06 2E-10 74.1 5.6 58 522-580 54-115 (128)
419 1um7_A Synapse-associated prot 98.0 2.5E-06 8.7E-11 74.4 3.1 60 353-422 39-100 (113)
420 2dlu_A INAD-like protein; PDZ 98.0 7.3E-06 2.5E-10 71.4 5.9 60 521-581 37-99 (111)
421 3b76_A E3 ubiquitin-protein li 98.0 7.9E-06 2.7E-10 72.3 6.1 58 521-579 52-112 (118)
422 2dkr_A LIN-7 homolog B; LIN-7B 98.0 1.1E-05 3.7E-10 67.8 6.7 59 521-580 29-90 (93)
423 2gzv_A PRKCA-binding protein; 98.0 8.7E-06 3E-10 71.6 6.1 56 522-578 50-108 (114)
424 2eno_A Synaptojanin-2-binding 98.0 9.7E-06 3.3E-10 71.7 6.5 60 521-581 46-108 (120)
425 2d92_A INAD-like protein; PDZ 98.0 2.8E-06 9.5E-11 73.9 2.9 60 352-420 43-104 (108)
426 2edp_A Fragment, shroom family 98.0 4E-06 1.4E-10 71.8 3.8 59 522-581 35-95 (100)
427 3k1r_A Harmonin; protein-prote 98.0 8.2E-06 2.8E-10 78.4 6.4 63 521-585 109-173 (192)
428 2g5m_B Neurabin-2; spinophilin 98.0 6.3E-06 2.2E-10 72.0 5.1 60 521-581 34-96 (113)
429 1wg6_A Hypothetical protein (r 98.0 5.9E-06 2E-10 74.1 4.9 60 522-581 55-123 (127)
430 3r0h_A INAD, inactivation-NO-a 98.0 1.2E-05 4.1E-10 77.7 7.5 59 352-420 135-195 (206)
431 2qkv_A Inactivation-NO-after-p 98.0 1E-05 3.6E-10 68.6 6.2 58 521-579 30-90 (96)
432 1y8t_A Hypothetical protein RV 98.0 1.3E-05 4.4E-10 83.4 8.1 62 521-582 241-304 (324)
433 3kzd_A TIAM-1, T-lymphoma inva 98.0 1.1E-05 3.9E-10 68.3 6.3 54 521-577 34-89 (94)
434 2iwo_A Multiple PDZ domain pro 97.9 8.7E-06 3E-10 72.3 5.8 60 521-581 52-114 (120)
435 1um1_A KIAA1849 protein, RSGI 97.9 1.1E-05 3.6E-10 70.2 6.3 60 521-581 35-97 (110)
436 3soe_A Membrane-associated gua 97.9 2.6E-05 9E-10 68.4 8.7 61 353-423 34-95 (113)
437 2z17_A Pleckstrin homology SEC 97.9 7.3E-06 2.5E-10 70.6 5.1 55 521-576 47-103 (104)
438 2edv_A FERM and PDZ domain-con 97.9 7.1E-06 2.4E-10 69.7 5.0 58 521-580 30-89 (96)
439 1wfv_A Membrane associated gua 97.9 3.2E-06 1.1E-10 72.5 2.8 59 522-581 36-97 (103)
440 1uju_A Scribble; PDZ domain, c 97.9 4.8E-06 1.6E-10 72.6 3.9 59 521-580 43-104 (111)
441 3nfk_A Tyrosine-protein phosph 97.9 8.8E-06 3E-10 70.3 5.5 58 522-579 43-107 (107)
442 3egg_C Spinophilin; PP1, serin 97.9 9.1E-06 3.1E-10 76.7 6.0 59 352-420 110-170 (170)
443 1n7t_A 99-MER peptide of densi 97.9 1.4E-05 4.8E-10 68.6 6.5 58 521-580 42-101 (103)
444 3hpk_A Protein interacting wit 97.9 1.2E-05 4.1E-10 71.6 6.2 57 521-578 44-103 (125)
445 3hpk_A Protein interacting wit 97.9 9E-06 3.1E-10 72.5 5.3 58 352-419 44-103 (125)
446 4e34_A Golgi-associated PDZ an 97.9 9.9E-06 3.4E-10 67.2 5.2 57 353-419 28-86 (87)
447 1ufx_A KIAA1526 protein; PDZ d 97.9 8.5E-06 2.9E-10 70.3 4.8 58 523-580 33-97 (103)
448 3shw_A Tight junction protein 97.9 5.6E-06 1.9E-10 90.0 4.4 61 352-422 22-85 (468)
449 1qav_A Alpha-1 syntrophin (res 97.9 1.6E-05 5.5E-10 66.4 6.2 56 522-578 30-88 (90)
450 3l4f_D SH3 and multiple ankyri 97.9 1.8E-05 6.1E-10 71.5 6.9 58 522-580 65-124 (132)
451 1ky9_A Protease DO, DEGP, HTRA 97.9 3.9E-06 1.3E-10 91.4 2.9 62 521-582 285-347 (448)
452 2cs5_A Tyrosine-protein phosph 97.9 1.1E-05 3.7E-10 71.3 5.3 60 522-581 41-107 (119)
453 2krg_A Na(+)/H(+) exchange reg 97.9 3.1E-06 1.1E-10 83.0 1.9 66 353-430 33-104 (216)
454 3i4w_A Disks large homolog 4; 97.9 1.6E-05 5.6E-10 68.1 6.3 58 522-580 35-95 (104)
455 1uhp_A Hypothetical protein KI 97.9 2.1E-05 7E-10 68.1 6.9 59 521-580 40-101 (107)
456 1v6b_A Harmonin isoform A1; st 97.9 1.5E-06 5.3E-11 76.9 -0.4 59 354-420 44-106 (118)
457 1x5n_A Harmonin; PDZ domain, u 97.9 1.4E-05 4.7E-10 70.0 5.7 58 521-580 40-100 (114)
458 3k50_A Putative S41 protease; 97.9 1E-05 3.6E-10 86.6 5.9 57 354-423 91-148 (403)
459 3qo6_A Protease DO-like 1, chl 97.9 8E-06 2.7E-10 85.9 4.8 61 522-582 251-323 (348)
460 1wf8_A Neurabin-I; PDZ domain, 97.9 1.4E-05 4.7E-10 69.2 5.4 59 521-580 39-100 (107)
461 2d8i_A T-cell lymphoma invasio 97.9 9.9E-06 3.4E-10 71.3 4.5 56 522-580 44-101 (114)
462 2ehr_A INAD-like protein; PDZ 97.9 2.7E-05 9.3E-10 68.4 7.3 59 521-580 49-110 (117)
463 1r6j_A Syntenin 1; PDZ, membra 97.8 1.5E-05 5E-10 66.0 5.0 54 356-419 26-80 (82)
464 2cs5_A Tyrosine-protein phosph 97.8 8.8E-06 3E-10 71.8 3.9 62 353-422 41-107 (119)
465 2daz_A INAD-like protein; PDZ 97.8 1.5E-05 5.1E-10 71.0 5.4 60 521-581 50-112 (124)
466 2la8_A Inactivation-NO-after-p 97.8 1.4E-05 4.9E-10 69.2 5.1 58 521-579 24-84 (106)
467 1lvm_A Catalytic domain of the 97.8 0.0018 6.1E-08 63.1 20.2 145 158-319 46-202 (229)
468 2eei_A PDZ domain-containing p 97.8 1.5E-05 5E-10 68.8 5.0 59 521-580 31-91 (106)
469 1p1d_A PDZ45, glutamate recept 97.8 1.8E-05 6E-10 76.1 6.0 61 521-581 35-99 (196)
470 1w9e_A Syntenin 1; cell adhesi 97.8 2.3E-05 7.9E-10 73.3 6.2 59 521-579 26-86 (166)
471 4e34_A Golgi-associated PDZ an 97.8 2.7E-05 9.3E-10 64.5 5.9 55 522-577 28-85 (87)
472 2dc2_A GOPC, golgi associated 97.8 2.1E-05 7.2E-10 67.6 5.4 60 353-422 35-96 (103)
473 1v6b_A Harmonin isoform A1; st 97.8 2.9E-05 9.8E-10 68.6 6.3 57 523-579 44-106 (118)
474 1i16_A Interleukin 16, LCF; cy 97.8 1.1E-05 3.7E-10 72.6 3.6 61 352-421 56-118 (130)
475 3egg_C Spinophilin; PP1, serin 97.8 2.9E-05 1E-09 73.2 6.5 58 521-579 110-170 (170)
476 2dc2_A GOPC, golgi associated 97.8 3E-05 1E-09 66.6 6.0 57 522-579 35-94 (103)
477 2csj_A TJP2 protein; PDZ domai 97.8 2.4E-05 8.2E-10 68.8 5.3 60 521-582 45-106 (117)
478 1ufx_A KIAA1526 protein; PDZ d 97.7 7.2E-06 2.5E-10 70.7 1.5 59 354-422 33-98 (103)
479 3soe_A Membrane-associated gua 97.7 6.7E-05 2.3E-09 65.8 7.3 57 523-581 35-94 (113)
480 3gge_A PDZ domain-containing p 97.7 9.5E-05 3.2E-09 62.6 7.6 58 354-419 29-88 (95)
481 1um7_A Synapse-associated prot 97.7 2.5E-05 8.7E-10 68.0 4.1 58 522-580 39-99 (113)
482 1tp5_A Presynaptic density pro 97.7 4.4E-05 1.5E-09 67.3 5.5 58 522-580 38-98 (119)
483 2krg_A Na(+)/H(+) exchange reg 97.7 1.5E-05 5.1E-10 78.2 2.6 59 522-581 33-94 (216)
484 1r6j_A Syntenin 1; PDZ, membra 97.6 6.2E-05 2.1E-09 62.2 5.7 52 525-577 26-79 (82)
485 2lob_A Golgi-associated PDZ an 96.8 7.1E-06 2.4E-10 71.9 0.0 37 353-389 53-93 (112)
486 3tsz_A Tight junction protein 97.6 4.8E-05 1.7E-09 81.2 6.2 62 521-582 30-94 (391)
487 2qbw_A PDZ-fibronectin fusion 97.6 0.00012 4.1E-09 69.9 7.9 56 521-578 23-80 (195)
488 1k32_A Tricorn protease; prote 97.6 0.00014 4.9E-09 86.8 10.1 67 352-430 747-825 (1045)
489 3num_A Serine protease HTRA1; 97.5 1.1E-05 3.9E-10 84.1 0.0 61 521-583 253-313 (332)
490 2lob_A Golgi-associated PDZ an 96.7 1.2E-05 3.9E-10 70.6 0.0 54 522-576 53-109 (112)
491 3qzr_A 3C protein; chymotrypsi 97.5 0.0067 2.3E-07 57.5 18.6 146 150-308 28-178 (187)
492 2b0f_A Picornain 3C (protease 97.5 0.0035 1.2E-07 59.3 16.6 144 151-308 25-173 (182)
493 4fgm_A Aminopeptidase N family 97.5 6.9E-05 2.4E-09 84.3 5.4 61 522-583 496-557 (597)
494 4fln_A Protease DO-like 2, chl 97.5 0.0002 6.8E-09 79.2 8.5 62 521-583 276-348 (539)
495 3shw_A Tight junction protein 97.4 0.00012 4E-09 79.7 6.2 61 521-581 22-85 (468)
496 3q3y_A HEVB EV93 3C protease; 97.4 0.0068 2.3E-07 57.4 17.4 146 150-308 26-176 (191)
497 1z87_A Alpha-1-syntrophin; pro 97.4 5E-05 1.7E-09 76.5 2.8 60 353-422 103-164 (263)
498 1fc6_A Photosystem II D1 prote 97.4 0.00013 4.4E-09 77.8 5.9 61 521-581 98-160 (388)
499 3zve_A 3C protease; hydrolase, 97.4 0.0051 1.8E-07 58.6 16.3 144 150-308 24-174 (190)
500 2pka_A Kallikrein A; serine pr 97.3 0.00048 1.6E-08 56.0 7.0 43 134-178 7-51 (80)
No 1
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=8.6e-80 Score=680.20 Aligned_cols=457 Identities=51% Similarity=0.890 Sum_probs=414.5
Q ss_pred CCCcEEEEeeeeCCCCCCcccccCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEE
Q 007213 122 MDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAML 201 (612)
Q Consensus 122 ~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DLAlL 201 (612)
.+|||+|.+....++|..||+..++..+.||||||++||||||+|||.++..+.|++..+++.++|++++.|+.+|||||
T Consensus 47 ~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DLAvL 126 (539)
T 4fln_A 47 LNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIALL 126 (539)
T ss_dssp HTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEETTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTEEEE
T ss_pred CCCeEEEEEEecCCCCCCccccCCccceEEEEEEEECCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCEEEE
Confidence 35999999999999999999999999999999999999999999999999999999977999999999999999999999
Q ss_pred EeccccccCCeeeeEcCCCCCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEec
Q 007213 202 TVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFN 281 (612)
Q Consensus 202 kv~~~~~~~~l~pl~l~~~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn 281 (612)
|++...++..+.++.+++++.+|++|+++|||+++...+++.|+||++++..+..+.....+||+|+++++|||||||||
T Consensus 127 kv~~~~~~~~~~pl~~g~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~~~~~~~~IQtDAaInpGnSGGPLvn 206 (539)
T 4fln_A 127 SVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPAFN 206 (539)
T ss_dssp EECCSSSSTTCCCCCBCCCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTTSCCEEEEEEESSCCCTTTTTSEEEC
T ss_pred EEeCCcCCcCCceeecCCcCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccCCCCcceeEEEEEeEecCCCccchhcc
Confidence 99987666678889999999999999999999987766999999999988877666666678999999999999999999
Q ss_pred CCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHHcCcccCCCcCCeEEeeecChhhHHhhhcccCCCccEEEEec
Q 007213 282 DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVD 361 (612)
Q Consensus 282 ~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~~g~v~~~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~ 361 (612)
.+|+||||+++.+...+..+++||||++.+++++++|+++|++.+|||||+.++.++++.+++.+||+. ..|++|.+|.
T Consensus 207 ~~GeVIGIntai~~~~~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~~-~~Gv~V~~V~ 285 (539)
T 4fln_A 207 DQGECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPT-NEGVLVRRVE 285 (539)
T ss_dssp SSSCEEEEECCCC-----CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHHTCSS-SBCEEEEEEC
T ss_pred CCCcEEEEEEEEecCCCCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhcCCCC-cCceeeeccc
Confidence 999999999998876677899999999999999999999999877999999999987899999999987 6899999999
Q ss_pred CCCcccCCCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEeccCccccCCCC
Q 007213 362 PTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHN 441 (612)
Q Consensus 362 p~spA~~GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~~~~~~~~~~~ 441 (612)
++|||+++||+||+|++|||++|.+.+++.++..+++.|..++....+|++++|+|+|+|+.+++++++...+...+.+.
T Consensus 286 ~~spA~~al~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl~~~~~~~~~~~ 365 (539)
T 4fln_A 286 PTSDASKVLKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPRVHLVPYHI 365 (539)
T ss_dssp TTSGGGGTCCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCCCCSSCSCT
T ss_pred CCChHHhCccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEEccCcccccccc
Confidence 99999889999999999999999999998888888999999999999999999999999999999999999999999888
Q ss_pred CCCCCCceeeccEEEeecCchhhhhhHHhhccHHHHHHhCCcccccccccchhhhhhh-ccCCccccccchhhhhcccCC
Q 007213 442 KGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLWC-LRSPLCLNCFNKVFLLSLSLT 520 (612)
Q Consensus 442 ~~~~p~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 520 (612)
....|+|++++||+|++++ +.+..+++... ...++++...+. .+.++
T Consensus 366 ~~~~p~~~~~~Gl~f~~Lt-------------~~~~~~~~~~~---~~~~l~~~~~~~~~~~~~---------------- 413 (539)
T 4fln_A 366 DGGQPSYIIVAGLVFTPLS-------------EPLIEEECEDT---IGLKLLTKARYSVARFRG---------------- 413 (539)
T ss_dssp TSSCCCCCCSTTEEEEECC-------------HHHHTTSCSSS---SCHHHHHHHHHCCCSSTT----------------
T ss_pred ccCCCccccccceEEeeCC-------------HHHHHhhcccc---cCceeeehhhhhhhccCC----------------
Confidence 8899999999999999999 66666665442 233444333322 22222
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhCCCCeEEEEEeCCeEEEEechhhHHHHHHHHHHc
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENCDDEFLKFDLEYDQVVVLRTKTSKAATLDILATH 600 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~~~~~~~l~~~r~~~~~l~~~~~~~~~~~i~~~~ 600 (612)
.++|+|++|+++++|.+||++.||+|++|||++|+|++||.++|+++++++++|+++++..++|+++++++++++||++|
T Consensus 414 ~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~l~~~l~~~k~~~l~~~~~~~~~ivL~~~~~~~~~~~Il~~~ 493 (539)
T 4fln_A 414 EQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMCKDKYLVFEFEDNYVAVLEREASNSASLCILKDY 493 (539)
T ss_dssp CCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHHHHHHHHTCCSSEEEEEETTSCEEEEEHHHHHHHHHHHHTTT
T ss_pred ceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHHHHHHHHHcCCCeEEEEECCCEEEEEEHHHHHHhHHHHHHhc
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCCccCCC
Q 007213 601 CIPSAMSDDLK 611 (612)
Q Consensus 601 ~i~~~~s~~~~ 611 (612)
+|||+||+||.
T Consensus 494 ~I~~~~S~dl~ 504 (539)
T 4fln_A 494 GIPSERSADLL 504 (539)
T ss_dssp TCSCSSCGGGG
T ss_pred CCCcccCcchh
Confidence 99999999996
No 2
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=8.3e-57 Score=491.04 Aligned_cols=392 Identities=21% Similarity=0.288 Sum_probs=321.1
Q ss_pred CchhHHhhhcccCCCcEEEEeeeeCCC-----------C--CCcccccCCcceEEEEEEEe-C-CEEEecccccCCCCeE
Q 007213 110 DVEPGVARVVPAMDAVVKVFCVHTEPN-----------F--SLPWQRKRQYSSSSSGFAIG-G-RRVLTNAHSVEHYTQV 174 (612)
Q Consensus 110 ~~~~~~~~v~~~~~SVV~I~~~~~~~~-----------~--~~p~~~~~~~~~~GSGfiI~-~-g~ILT~aHvV~~~~~i 174 (612)
++.+.++++.+ |||.|........ + .+||+......+.||||||+ + ||||||+|||.++..+
T Consensus 14 ~~~~~~~~~~p---aVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i 90 (436)
T 4a8c_A 14 SLAPMLEKVLP---AVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKI 90 (436)
T ss_pred CHHHHHHhhCC---cEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEE
Confidence 45556666666 9999998764431 1 12444444557899999998 5 8999999999999999
Q ss_pred EEEEcCCCcEEEEEEEEeccCCCeEEEEeccccccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeee
Q 007213 175 KLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEIL 252 (612)
Q Consensus 175 ~V~~~~~g~~~~a~vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~ 252 (612)
.|++. +++.++|++++.|+.+||||||++... .++++.|+++ ...|++|+++|||++... +++.|+|+++.+.
T Consensus 91 ~V~~~-dg~~~~a~vv~~d~~~DlAllkv~~~~---~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~-~vt~G~vs~~~r~ 165 (436)
T 4a8c_A 91 SIQLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSALGRS 165 (436)
T ss_pred EEEeC-CCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEEcCCCCCc-cEEEEEEeeeccc
Confidence 99995 999999999999999999999997543 6899999864 467999999999999765 8999999998776
Q ss_pred cccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCC-ccceeecccChhhHHHHHHHHHHcCcccCCCcCC
Q 007213 253 SYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLG 331 (612)
Q Consensus 253 ~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~-~~~~~~~aIPi~~i~~~l~~l~~~g~v~~~~~lG 331 (612)
... ...+..+||+|+++++|||||||||.+|+||||+++.+... +..+++|+||++.+++++++|.++|++. |+|||
T Consensus 166 ~~~-~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-r~~lG 243 (436)
T 4a8c_A 166 GLN-LEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLG 243 (436)
T ss_pred ccC-CCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccc-cccCc
Confidence 222 22234689999999999999999999999999999877543 4568999999999999999999999998 99999
Q ss_pred eEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCC
Q 007213 332 VEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTG 410 (612)
Q Consensus 332 i~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g 410 (612)
+.++.+ ++++++.+|++. ..|++|.+|.++|||++ |||+||+|++|||++|.+|.++. ..+.....|
T Consensus 244 v~~~~~-~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~----------~~l~~~~~g 311 (436)
T 4a8c_A 244 IKGTEM-SADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELR----------SRIATTEPG 311 (436)
T ss_pred eEeccc-CHHHHHHhCCCC-CcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHH----------HHHHhcCCC
Confidence 999999 999999999986 67999999999999999 99999999999999999998853 666666789
Q ss_pred CEEEEEEEECCEEEEEEEEeccCccccCCCCCCCCCCceeeccEEEeecCchhhhhhHHhhccHHHHHHhCCcccccccc
Q 007213 411 DSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHN 490 (612)
Q Consensus 411 ~~v~l~V~R~G~~~~~~v~l~~~~~~~~~~~~~~~p~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 490 (612)
++++|+|+|+|+.+++++++..++....... ....|+....+. +. ..
T Consensus 312 ~~v~l~v~R~g~~~~~~v~l~~~~~~~~~~~-------~~~~gl~~~~~~-------------~~-----~~-------- 358 (436)
T 4a8c_A 312 TKVKLGLLRNGKPLEVEVTLDTSTSSSASAE-------MITPALEGATLS-------------DG-----QL-------- 358 (436)
T ss_pred CEEEEEEEECCEEEEEEEEECCCCccccccc-------ccccCceeeecc-------------cc-----cc--------
Confidence 9999999999999999999987653221100 001222222222 00 00
Q ss_pred cchhhhhhhccCCccccccchhhhhcccCCCCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhCCCC
Q 007213 491 CQMSSLLWCLRSPLCLNCFNKVFLLSLSLTFSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENCDDE 570 (612)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~~~~ 570 (612)
.....+++|.+|.++++|..+|+++||+|++|||++|.+|++|.++|++. ++
T Consensus 359 ---------------------------~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~l~~~-~~ 410 (436)
T 4a8c_A 359 ---------------------------KDGGKGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAK-PA 410 (436)
T ss_pred ---------------------------cCCCCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhC-CC
Confidence 00135799999999999999999999999999999999999999999984 45
Q ss_pred eEEEEEeCCeEEEE
Q 007213 571 FLKFDLEYDQVVVL 584 (612)
Q Consensus 571 ~~~l~~~r~~~~~l 584 (612)
.+.|++.|+++.+.
T Consensus 411 ~v~l~v~R~g~~~~ 424 (436)
T 4a8c_A 411 IIALQIVRGNESIY 424 (436)
T ss_pred eEEEEEEECCEEEE
Confidence 89999999877654
No 3
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=7e-56 Score=485.03 Aligned_cols=397 Identities=22% Similarity=0.287 Sum_probs=316.2
Q ss_pred CchhHHhhhcccCCCcEEEEeeeeCCC--------CCCc-----cc--------ccCCcceEEEEEEEe-C-CEEEeccc
Q 007213 110 DVEPGVARVVPAMDAVVKVFCVHTEPN--------FSLP-----WQ--------RKRQYSSSSSGFAIG-G-RRVLTNAH 166 (612)
Q Consensus 110 ~~~~~~~~v~~~~~SVV~I~~~~~~~~--------~~~p-----~~--------~~~~~~~~GSGfiI~-~-g~ILT~aH 166 (612)
++.++++++.| |||.|.+...... ...| |. ..+...+.||||||+ + ||||||+|
T Consensus 20 ~~~~~~~~~~p---avv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~H 96 (451)
T 3pv2_A 20 SMAPVLKNIMP---AIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDH 96 (451)
T ss_dssp CSHHHHHHHGG---GEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHH
T ss_pred CHHHHHHHhCC---cEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChH
Confidence 56778888888 9999998764221 0111 11 123345789999998 4 89999999
Q ss_pred ccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEeccccccCCeeeeEcCCC--CCCCCeEEEEEeCCCCC----cee
Q 007213 167 SVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGD----TIS 240 (612)
Q Consensus 167 vV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~----~~s 240 (612)
||.++..+.|++. +++.++|++++.|+.+||||||++.. .++++.|+++ ..+|++|+++|||+|.. ..+
T Consensus 97 Vv~~a~~i~V~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~----~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~~ 171 (451)
T 3pv2_A 97 VIRNASLITVTLQ-DGRRLKARLIGGDSETDLAVLKIDAK----NLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQS 171 (451)
T ss_dssp HHTTEEEEEEECT-TSCEEECEEEEEETTTTEEEEECCCS----SCCCCCBCCGGGCCTTCEEEEEECCCCC-----CCE
T ss_pred HhCCCCEEEEEEc-CCCEEEEEEEecCcCCcEEEEEEcCc----CCceeEecCcccCCCCCEEEEEECCCCccccccCCc
Confidence 9999999999995 99999999999999999999999764 6889999874 46799999999999875 148
Q ss_pred EEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCC-ccceeecccChhhHHHHHHHHH
Q 007213 241 VTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 241 v~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~-~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
++.|+|++..+.... ...+..+||+|+++++|||||||||.+|+||||+++.+... +..+++||||++.+++++++|+
T Consensus 172 vt~Givs~~~r~~~~-~~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~ 250 (451)
T 3pv2_A 172 ATFGIVSALKRSDLN-IEGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQII 250 (451)
T ss_dssp EEEEEEEEEC-----------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHH
T ss_pred eeEEEEeeccccccC-CCCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHH
Confidence 999999998765221 12234679999999999999999999999999999877543 4568999999999999999999
Q ss_pred HcCcccCCCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccc
Q 007213 320 KNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERI 398 (612)
Q Consensus 320 ~~g~v~~~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~ 398 (612)
++|++. |+|||+.++.+ ++++++.+|++....|++|..|.++|||++ |||+||+|++|||++|.+|.++
T Consensus 251 ~~g~v~-r~~lGv~~~~~-~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l-------- 320 (451)
T 3pv2_A 251 KFGSIH-RGLMGIFVQHL-TPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQV-------- 320 (451)
T ss_dssp HHSSCC-CCBCCEEEEEC-CHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHH--------
T ss_pred hcCCcc-cccccceEEec-cHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHH--------
Confidence 999998 99999999999 999999999997447999999999999999 9999999999999999999884
Q ss_pred hHHHHhhccCCCCEEEEEEEECCEEEEEEEEeccCccccCCCCCCCCCCceeeccEEEeecCchhhhhhHHhhccHHHHH
Q 007213 399 GFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRS 478 (612)
Q Consensus 399 ~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~~~~~~~~~~~~~~~p~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 478 (612)
...+.....|++++|+|+|+|+.+++++++...+........ ....+.|+.|.++. +...
T Consensus 321 --~~~l~~~~~g~~v~l~V~R~g~~~~~~v~l~~~~~~~~~~~~----~~~~~~G~~l~~~~-------------~~~~- 380 (451)
T 3pv2_A 321 --KTTISLLRVGSTVKIIVERDNKPLTLSAVVTDIKSHEQKLQS----NNPFLYGLALRAFE-------------QESP- 380 (451)
T ss_dssp --HHHHHTSCTTCEEEEEEEETTEEEEEEEECBCHHHHHHHHHH----HSTTTTTEEEEEEE-------------EECT-
T ss_pred --HHHHHhcCCCCEEEEEEEECCEEEEEEEEEccCCcccccccc----ccccccccccccCC-------------hhHh-
Confidence 367777788999999999999999999998865421100000 00013567776654 1000
Q ss_pred HhCCcccccccccchhhhhhhccCCccccccchhhhhcccCCCCceEEEeeecccccccccccccceeEeeCCeecCCHH
Q 007213 479 SFWTSSCIQCHNCQMSSLLWCLRSPLCLNCFNKVFLLSLSLTFSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLK 558 (612)
Q Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~ 558 (612)
. .....+++|.+|.++++|..+|+++||+|++|||++|.+++
T Consensus 381 --~------------------------------------~~~~~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~ 422 (451)
T 3pv2_A 381 --P------------------------------------HGNVIGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVK 422 (451)
T ss_dssp --T------------------------------------SCEEEEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHH
T ss_pred --c------------------------------------ccCCCceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHH
Confidence 0 00035799999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCeEEEEEeCCeEEEE
Q 007213 559 SLANMVENCDDEFLKFDLEYDQVVVL 584 (612)
Q Consensus 559 ~l~~~l~~~~~~~~~l~~~r~~~~~l 584 (612)
+|.++|++ +++.+.|++.|+++.+.
T Consensus 423 ~~~~~l~~-~~~~v~l~v~R~g~~~~ 447 (451)
T 3pv2_A 423 SLQTIAQE-KKKELLVQVLRGPGSMY 447 (451)
T ss_dssp HHHHHTTS-SCSCEEEEEEETTEEEE
T ss_pred HHHHHHhc-CCCeEEEEEEECCEEEE
Confidence 99999997 67889999999876643
No 4
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=3.4e-54 Score=471.33 Aligned_cols=353 Identities=23% Similarity=0.319 Sum_probs=231.5
Q ss_pred ceEEEEEEEe-C-CEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEeccccccCCeeeeEcCCC--CCC
Q 007213 148 SSSSSGFAIG-G-RRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PAL 223 (612)
Q Consensus 148 ~~~GSGfiI~-~-g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~ 223 (612)
.+.||||+|+ + ||||||+|||.++..+.|++. +++.++|++++.|+.+||||||++... .++++.|+++ .++
T Consensus 85 ~~~GSG~ii~~~~g~IlTn~HVv~~a~~i~V~~~-dg~~~~a~vv~~d~~~DlAvlkv~~~~---~~~~~~l~~s~~~~~ 160 (448)
T 1ky9_A 85 MALGSGVIIDADKGYVVTNNHVVDNATVIKVQLS-DGRKFDAKMVGKDPRSDIALIQIQNPK---NLTAIKMADSDALRV 160 (448)
T ss_dssp EEEEEEEEEETTTTEEEEEHHHHTTEEEEEEEET-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCT
T ss_pred ccEEEEEEEECCCCEEEEChHHhCCCCEEEEEEC-CCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEEecccccCCC
Confidence 4689999998 5 899999999999999999995 999999999999999999999998643 6889999875 467
Q ss_pred CCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCC-cccee
Q 007213 224 QDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENI 302 (612)
Q Consensus 224 G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~-~~~~~ 302 (612)
|++|+++|||++... +++.|+|+++.+... ....+..+||+|+++++|||||||+|.+|+||||+++.+..+ +..++
T Consensus 161 G~~V~aiG~P~g~~~-tvt~Givs~~~r~~~-~~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~ 238 (448)
T 1ky9_A 161 GDYTVAIGNPFGLGE-TVTSGIVSALGRSGL-NAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGI 238 (448)
T ss_dssp TCEEEEEECTTSSSC-EEEEEEEEEESSCC------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSS
T ss_pred CCEEEEEECCCCCCC-eEEeEEEeecccccc-CCCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccce
Confidence 999999999999765 999999999876521 112234679999999999999999999999999999876533 34689
Q ss_pred ecccChhhHHHHHHHHHHcCcccCCCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECC
Q 007213 303 GYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDG 381 (612)
Q Consensus 303 ~~aIPi~~i~~~l~~l~~~g~v~~~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG 381 (612)
+|+||++.+++++++|.++|++. |+|||+.++.+ ++++++.+|++. ..|++|..|.++|||++ ||++||+|++|||
T Consensus 239 gfaIP~~~~~~~~~~l~~~g~v~-~~~LGv~~~~~-~~~~a~~lgl~~-~~G~~V~~V~~gspA~~AGL~~GDvI~~inG 315 (448)
T 1ky9_A 239 GFAIPSNMVKNLTSQMVEYGQVK-RGELGIMGTEL-NSELAKAMKVDA-QRGAFVSQVLPNSSAAKAGIKAGDVITSLNG 315 (448)
T ss_dssp EEEEEHHHHHHHHHHHHHHSSCC-BCCCCCSCCCT-TSHHHHTSCCTT-CCSEECCCCTTCSSSTTTTCCTTCEECBSSS
T ss_pred eeeeecccchhhHHHHhhhcccc-eeccccccccc-cHHHHHHhCCCC-CCceEEEEeccCCHHHHcCCCCCCEEEEECC
Confidence 99999999999999999999998 99999999998 899999999986 67999999999999999 9999999999999
Q ss_pred EEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEeccCccccCCCCCCCCCCceeeccEEEeecCc
Q 007213 382 IDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLY 461 (612)
Q Consensus 382 ~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~~~~~~~~~~~~~~~p~~~~~~Gl~~~~~~~ 461 (612)
++|.+|.++ ...+.....|++++|+|+|+|+.+++++++...+....... ..+..+.|+.+.++.
T Consensus 316 ~~v~~~~~l----------~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~~~~~~~----~~~~~~~G~~l~~~~- 380 (448)
T 1ky9_A 316 KPISSFAAL----------RAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSS----SIFNGIEGAEMSNKG- 380 (448)
T ss_dssp SBCCSSHHH----------HHHTTSSBTTCCCEEEEESSSCEEECCCC--------------------------------
T ss_pred EEcCCHHHH----------HHHHHhcCCCCEEEEEEEECCEEEEEEEEEecCCCcccccc----cccccccceEeeccC-
Confidence 999999874 36666666899999999999998888877654321000000 000011222222111
Q ss_pred hhhhhhHHhhccHHHHHHhCCcccccccccchhhhhhhccCCccccccchhhhhcccCCCCceEEEeeeccccccccccc
Q 007213 462 LISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLWCLRSPLCLNCFNKVFLLSLSLTFSFPWFCKVLVADINIGYEEI 541 (612)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~v~~~~~~~~~g~~ 541 (612)
...+++|.+|.++++|..+|++
T Consensus 381 ----------------------------------------------------------~~~gv~V~~V~~gspA~~aGL~ 402 (448)
T 1ky9_A 381 ----------------------------------------------------------KDQGVVVNNVKTGTPAAQIGLK 402 (448)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------CCCeEEEEEecCCCHHHHcCCC
Confidence 0356899999999999999999
Q ss_pred ccceeEeeCCeecCCHHHHHHHHHhCCCCeEEEEEeCCeEEE
Q 007213 542 VNTQVLAFNGNPVKNLKSLANMVENCDDEFLKFDLEYDQVVV 583 (612)
Q Consensus 542 ~gd~I~~vng~~v~~~~~l~~~l~~~~~~~~~l~~~r~~~~~ 583 (612)
+||+|++|||++|.++++|.++|++.++ .+.|++.|+++.+
T Consensus 403 ~GDiI~~vng~~v~~~~~l~~~l~~~~~-~v~l~v~R~g~~~ 443 (448)
T 1ky9_A 403 KGDVIIGANQQAVKNIAELRKVLDSKPS-VLALNIQRGDSTI 443 (448)
T ss_dssp ------------------------------------------
T ss_pred CCCEEEEECCEECCCHHHHHHHHHcCCC-eEEEEEEECCEEE
Confidence 9999999999999999999999997654 8889999987643
No 5
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=1.1e-48 Score=414.20 Aligned_cols=305 Identities=26% Similarity=0.390 Sum_probs=257.3
Q ss_pred CchhHHhhhcccCCCcEEEEeeeeCCC-----------C--CCcccccCCcceEEEEEEEe-C-CEEEecccccCCCCeE
Q 007213 110 DVEPGVARVVPAMDAVVKVFCVHTEPN-----------F--SLPWQRKRQYSSSSSGFAIG-G-RRVLTNAHSVEHYTQV 174 (612)
Q Consensus 110 ~~~~~~~~v~~~~~SVV~I~~~~~~~~-----------~--~~p~~~~~~~~~~GSGfiI~-~-g~ILT~aHvV~~~~~i 174 (612)
++.+.++++.+ |||.|........ + ..||+......+.||||||+ + ||||||+|||.++..+
T Consensus 14 ~~~~~~~~~~p---aVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i 90 (345)
T 3stj_A 14 SLAPMLEKVLP---AVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKI 90 (345)
T ss_dssp BSHHHHHHHGG---GEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEEEE
T ss_pred CHHHHHHHhCC---cEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEE
Confidence 46677777777 9999998764431 1 12444444557899999998 4 8999999999999999
Q ss_pred EEEEcCCCcEEEEEEEEeccCCCeEEEEeccccccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeee
Q 007213 175 KLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEIL 252 (612)
Q Consensus 175 ~V~~~~~g~~~~a~vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~ 252 (612)
.|++. +++.+++++++.|+.+||||||++... .++++.|+++ ...|++|+++|||.+... +++.|+|++..+.
T Consensus 91 ~V~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~-~vt~G~Vs~~~~~ 165 (345)
T 3stj_A 91 SIQLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSALGRS 165 (345)
T ss_dssp EEECT-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGCSC-EEEEEEEEEEEEC
T ss_pred EEEeC-CCcEEEEEEEEEcCCCCEEEEEEcccC---CCceEeecCcccCCCCCEEEEEECCCCCCC-cEEeeEEeeeccc
Confidence 99994 899999999999999999999997543 6889999874 467999999999999765 8999999998776
Q ss_pred cccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCC-ccceeecccChhhHHHHHHHHHHcCcccCCCcCC
Q 007213 253 SYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLG 331 (612)
Q Consensus 253 ~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~-~~~~~~~aIPi~~i~~~l~~l~~~g~v~~~~~lG 331 (612)
.... .....++|+|+++++|||||||||.+|+||||+++.+... +..+++|+||++.+++++++|.++|++. |+|||
T Consensus 166 ~~~~-~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-~~~lG 243 (345)
T 3stj_A 166 GLNL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLG 243 (345)
T ss_dssp CSSS-SSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECC
T ss_pred ccCC-CCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhccccc-ccccc
Confidence 2221 2234679999999999999999999999999999877543 4568999999999999999999999998 99999
Q ss_pred eEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCC
Q 007213 332 VEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTG 410 (612)
Q Consensus 332 i~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g 410 (612)
+.++.+ ++++++.+|++. ..|++|.+|.++|||++ |||+||+|++|||++|.++.++ ...+....+|
T Consensus 244 v~~~~~-~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l----------~~~l~~~~~g 311 (345)
T 3stj_A 244 IKGTEM-SADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAEL----------RSRIATTEPG 311 (345)
T ss_dssp EEEEEC-CHHHHHHTTCSC-CSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHH----------HHHHHTSCTT
T ss_pred eeeEee-cHHHHHhcCCCC-CceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHH----------HHHHHhcCCC
Confidence 999999 999999999986 78999999999999999 9999999999999999999884 4777777899
Q ss_pred CEEEEEEEECCEEEEEEEEeccCccc
Q 007213 411 DSAAVKVLRDSKILNFNITLATHRRL 436 (612)
Q Consensus 411 ~~v~l~V~R~G~~~~~~v~l~~~~~~ 436 (612)
++++|+|+|+|+.+++++++...+..
T Consensus 312 ~~v~l~v~R~g~~~~~~v~l~~~~~~ 337 (345)
T 3stj_A 312 TKVKLGLLRNGKPLEVEVTLDTSTSS 337 (345)
T ss_dssp CEEEEEEEETTEEEEEEEECEEC---
T ss_pred CEEEEEEEECCEEEEEEEEEcccCCC
Confidence 99999999999999999999876543
No 6
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=1.5e-45 Score=386.66 Aligned_cols=298 Identities=23% Similarity=0.359 Sum_probs=254.5
Q ss_pred CchhHHhhhcccCCCcEEEEeeeeCCCCCCcccccCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEE
Q 007213 110 DVEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLAT 188 (612)
Q Consensus 110 ~~~~~~~~v~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~ 188 (612)
++.+.++++.+ |||+|........ |+......+.||||+|+ +||||||+|||.++..+.|++. +++.++++
T Consensus 10 ~~~~~~~~~~~---sVV~I~~~~~~~~----~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a~ 81 (318)
T 1te0_A 10 SYNLAVRRAAP---AVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DGRVFEAL 81 (318)
T ss_dssp CCHHHHHHHGG---GEEEEEEEEECSS----SSCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEECT-TSCEEEEE
T ss_pred cHHHHHHhcCC---cEEEEEeEeccCC----cccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEeC-CCCEEEEE
Confidence 45667777777 9999999875442 33333456799999998 6799999999999999999984 89999999
Q ss_pred EEEeccCCCeEEEEeccccccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEE
Q 007213 189 VLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQI 266 (612)
Q Consensus 189 vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~ 266 (612)
++++|+.+||||||++... .++++.|+++ ...|+.|+++|||.+... +++.|+|+...+..+. ......+|++
T Consensus 82 v~~~d~~~DlAllk~~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~-~~~~~~~i~~ 156 (318)
T 1te0_A 82 LVGSDSLTDLAVLIIKATG---GLPTIPINARRVPHIGDVVLAIGNPYNLGQ-TITQGIISATGRIGLN-PTGRQNFLQT 156 (318)
T ss_dssp EEEEETTTTEEEEECCCSS---CCCCCCCCTTCCCCTTCEEEEECCCSSSSC-CEEEEEEEECCCCCCC-TTCSCCSEEE
T ss_pred EEEeCCCceEEEEEEeCCC---CCceEEeeCccCCCCCCEEEEEEcCCCCCC-cEEeeEEecccccccC-CCCcCCEEEE
Confidence 9999999999999998763 6789999863 467999999999998664 8999999988754322 1123357999
Q ss_pred ccCCCCCCCCCeEecCCCeEEEEEecccCCC----ccceeecccChhhHHHHHHHHHHcCcccCCCcCCeEEeeecChhh
Q 007213 267 DAAINSGNSGGPAFNDKGKCVGIAFQSLKHE----DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDL 342 (612)
Q Consensus 267 da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~----~~~~~~~aIPi~~i~~~l~~l~~~g~v~~~~~lGi~~~~~~~~~~ 342 (612)
|+.+++|+|||||+|.+|+||||+++.+... ...+++|+||++.+++++++|.++|++. ++|||+.++.+ ++.+
T Consensus 157 d~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~-~~~lGi~~~~~-~~~~ 234 (318)
T 1te0_A 157 DASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI-RGYIGIGGREI-APLH 234 (318)
T ss_dssp SSCCCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCEEEEEC-SCCC
T ss_pred CCCCCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcc-cccceeEeeec-chhH
Confidence 9999999999999999999999999876532 3567899999999999999999999998 89999999999 7888
Q ss_pred HHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 343 RVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 343 ~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
++.+|++. ..|++|..|.++|||++ |||+||+|++|||++|.++.++ ..++.....|++++|+|+|+|
T Consensus 235 ~~~~g~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l----------~~~l~~~~~g~~v~l~v~R~g 303 (318)
T 1te0_A 235 AQGGGIDQ-LQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALET----------MDQVAEIRPGSVIPVVVMRDD 303 (318)
T ss_dssp SSSSCSSS-CCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHH----------HHHHHTSCTTCEEEEEEESSS
T ss_pred HHhccCCC-CCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHH----------HHHHHhcCCCCEEEEEEEECC
Confidence 89999976 67999999999999999 9999999999999999998774 466766678999999999999
Q ss_pred EEEEEEEEeccC
Q 007213 422 KILNFNITLATH 433 (612)
Q Consensus 422 ~~~~~~v~l~~~ 433 (612)
+.+++++++...
T Consensus 304 ~~~~~~v~~~~~ 315 (318)
T 1te0_A 304 KQLTLQVTIQEY 315 (318)
T ss_dssp CEEEEEEECEEC
T ss_pred EEEEEEEEEccC
Confidence 999999988754
No 7
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.8e-44 Score=382.94 Aligned_cols=298 Identities=24% Similarity=0.375 Sum_probs=245.7
Q ss_pred HhhhcccCCCcEEEEeeeeCCCCCCcccccCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEec
Q 007213 115 VARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG 193 (612)
Q Consensus 115 ~~~v~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d 193 (612)
.+.++++.+|||.|.......++.. +.......+.||||||+ +||||||+|||.++..+.|.+. +++.++++++..|
T Consensus 20 ~~~~~~~~~sVV~I~~~~~~~~~~~-~~~~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a~~v~~d 97 (348)
T 3qo6_A 20 VRLFQENTPSVVYITNLAVRQDAFT-LDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLA-DQTTFDAKVVGFD 97 (348)
T ss_dssp HHHHHHHGGGEEEEEEEEEEECSSS-CCEEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECT-TSCEEEEEEEEEE
T ss_pred HHHHHHhCCCEEEEEEEeecccccc-cccccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEEC-CCCEEEEEEEEEc
Confidence 3344444459999998765433211 11112235789999999 6799999999999999999994 8999999999999
Q ss_pred cCCCeEEEEeccccccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeeeccc--CCceeeeEEEEccC
Q 007213 194 TECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYV--HGSTELLGLQIDAA 269 (612)
Q Consensus 194 ~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~--~~~~~~~~i~~da~ 269 (612)
+.+||||||++.+. ..++++.|+++ ...|+.|+++|||.+... +++.|+|+.+.+.... .+.....++++|+.
T Consensus 98 ~~~DlAlLkl~~~~--~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~~~i~~da~ 174 (348)
T 3qo6_A 98 QDKDVAVLRIDAPK--NKLRPIPVGVSADLLVGQKVFAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAA 174 (348)
T ss_dssp GGGTEEEEECCCCG--GGCCCCCBCCSTTCCTTCEEEEEECGGGCTT-EEEEEEEEEEEEEECCSSSSSCEEEEEEECSC
T ss_pred CcCCEEEEEEcCCC--CCceeEEecCcccCCCCCEEEEEECCCCCCC-cEeEEEEEeeccccccccCCCcccCEEEEeCC
Confidence 99999999998752 26789999864 356999999999998766 8999999988765332 22334567999999
Q ss_pred CCCCCCCCeEecCCCeEEEEEecccCCC-ccceeecccChhhHHHHHHHHHHcCcccCCCcCCeEEeeecChhhHHhhhc
Q 007213 270 INSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSM 348 (612)
Q Consensus 270 i~~G~SGGPlvn~~G~VIGI~~~~~~~~-~~~~~~~aIPi~~i~~~l~~l~~~g~v~~~~~lGi~~~~~~~~~~~~~lgl 348 (612)
+++|||||||+|.+|+||||+++.+... ...+++|+||++.+++++++|.++|++. |||||+.+... ..++.+|+
T Consensus 175 i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~-~~~lGi~~~~~---~~~~~~~~ 250 (348)
T 3qo6_A 175 INPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVT-RPILGIKFAPD---QSVEQLGV 250 (348)
T ss_dssp CCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCCEECCT---TTTTTTTC
T ss_pred cCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCcee-eeecCcEEccc---hhhhhcCC
Confidence 9999999999999999999999877543 3578999999999999999999999998 99999998743 33445554
Q ss_pred ccCCCccEEEEecCCCcccC-CCCC-----------CCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEE
Q 007213 349 KADQKGVRIRRVDPTAPESE-VLKP-----------SDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVK 416 (612)
Q Consensus 349 ~~~~~G~~V~~V~p~spA~~-GL~~-----------GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~ 416 (612)
.|++|.+|.++|||++ |||+ ||+|++|||++|.+|.++ ...+....+|++++|+
T Consensus 251 ----~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl----------~~~l~~~~~g~~v~l~ 316 (348)
T 3qo6_A 251 ----SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDL----------YRILDQCKVGDEVTVE 316 (348)
T ss_dssp ----SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHH----------HHHHTTCCTTCEEEEE
T ss_pred ----ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHH----------HHHHHhCCCcCEEEEE
Confidence 5999999999999999 9999 999999999999999885 3677777789999999
Q ss_pred EEECCEEEEEEEEeccCcc
Q 007213 417 VLRDSKILNFNITLATHRR 435 (612)
Q Consensus 417 V~R~G~~~~~~v~l~~~~~ 435 (612)
|+|+|+.+++++++..++.
T Consensus 317 v~R~g~~~~~~v~l~~~~~ 335 (348)
T 3qo6_A 317 VLRGDHKEKISVTLEPKPD 335 (348)
T ss_dssp EECSSSEEEEEEECEECC-
T ss_pred EEECCEEEEEEEEEccCCC
Confidence 9999999999999987643
No 8
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=1.7e-42 Score=364.35 Aligned_cols=282 Identities=24% Similarity=0.331 Sum_probs=234.6
Q ss_pred CchhHHhhhcccCCCcEEEEeeeeCCCCCCcccccCCcceEEEEEEEe-CCEEEecccccCCCC---------eEEEEEc
Q 007213 110 DVEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYT---------QVKLKKR 179 (612)
Q Consensus 110 ~~~~~~~~v~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvV~~~~---------~i~V~~~ 179 (612)
++.+.++++.+ |||+|..... ...+.||||+|+ +||||||+|||.+.. .+.|++.
T Consensus 7 ~~~~~~~~~~~---svV~I~~~~~------------~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~ 71 (324)
T 1y8t_A 7 SVEQVAAKVVP---SVVMLETDLG------------RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFS 71 (324)
T ss_dssp CHHHHHHHHGG---GEEEEEEEC----------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEET
T ss_pred cHHHHHHHhcC---cEEEEEEEcc------------CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeC
Confidence 45667777777 9999987542 234689999999 589999999998765 7999994
Q ss_pred CCCcEEEEEEEEeccCCCeEEEEeccccccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCC
Q 007213 180 GSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHG 257 (612)
Q Consensus 180 ~~g~~~~a~vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~ 257 (612)
+++.++++++++|+.+||||||++... .++++.|+++ ...|+.|+++|||.+... +++.|+|+...+.....+
T Consensus 72 -~g~~~~a~vv~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~G~vs~~~~~~~~~~ 146 (324)
T 1y8t_A 72 -DGRTAPFTVVGADPTSDIAVVRVQGVS---GLTPISLGSSSDLRVGQPVLAIGSPLGLEG-TVTTGIVSALNRPVSTTG 146 (324)
T ss_dssp -TCCEECEEEEECCTTTTEEEEEECSCC---SCCCCEECCSTTCCTTCEEEEEECGGGCTT-EEEEEEEEEEEEEECC--
T ss_pred -CCCEEEEEEEEeCCCCCEEEEEECCCC---CCceEEecCcccCCCCCEEEEEEcCCCCCC-cEeeeEEeeccccccccc
Confidence 899999999999999999999998753 6899999864 467999999999998665 889999998866432111
Q ss_pred -----ceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCC--------ccceeecccChhhHHHHHHHHHHcCcc
Q 007213 258 -----STELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE--------DVENIGYVIPTPVIMHFIQDYEKNGAY 324 (612)
Q Consensus 258 -----~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~--------~~~~~~~aIPi~~i~~~l~~l~~~g~v 324 (612)
.....+||+++.+++|||||||+|.+|+||||+++.+... +..+++|+||++.+++++++|+++|++
T Consensus 147 ~~g~~~~~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~ 226 (324)
T 1y8t_A 147 EAGNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKA 226 (324)
T ss_dssp -----CCCEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCC
T ss_pred ccCcccccCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCc
Confidence 1234689999999999999999999999999999866432 235789999999999999999999998
Q ss_pred cCCCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHH
Q 007213 325 TGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYL 403 (612)
Q Consensus 325 ~~~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~ 403 (612)
. ++|||+.+...+ ...|++|..|.++|||++ |||+||+|++|||++|.+|.++ ...
T Consensus 227 ~-~~~lGi~~~~~~------------~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l----------~~~ 283 (324)
T 1y8t_A 227 S-HASLGVQVTNDK------------DTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADAL----------VAA 283 (324)
T ss_dssp C-CEECCEEEESCS------------SSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHH----------HHH
T ss_pred c-ccccceEeeecc------------CCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHH----------HHH
Confidence 8 899999987531 246899999999999999 9999999999999999999874 366
Q ss_pred hhccCCCCEEEEEEEE-CCEEEEEEEEeccCc
Q 007213 404 VSQKYTGDSAAVKVLR-DSKILNFNITLATHR 434 (612)
Q Consensus 404 l~~~~~g~~v~l~V~R-~G~~~~~~v~l~~~~ 434 (612)
+....+|++++|+|+| +|+.+++++++...+
T Consensus 284 l~~~~~g~~v~l~v~R~~g~~~~~~v~~~~~~ 315 (324)
T 1y8t_A 284 VRSKAPGATVALTFQDPSGGSRTVQVTLGKAE 315 (324)
T ss_dssp HHTSCTTCEEEEEEECSSCCEEEEEEECEEC-
T ss_pred HHhcCCCCEEEEEEEECCCCEEEEEEEEccCC
Confidence 6666789999999999 999999999887653
No 9
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=1.1e-43 Score=373.58 Aligned_cols=290 Identities=27% Similarity=0.397 Sum_probs=234.2
Q ss_pred CchhHHhhhcccCCCcEEEEeeeeCCCCCCcccccCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEE
Q 007213 110 DVEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLAT 188 (612)
Q Consensus 110 ~~~~~~~~v~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~ 188 (612)
.+.+.++++.+ |||+|..... .||.......+.||||+|+ +||||||+|||.++..+.|++. +|+.++++
T Consensus 16 ~~~~~~~~~~~---sVV~I~~~~~-----~~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a~ 86 (325)
T 1lcy_A 16 FIADVVEKTAP---AVVYIEILDR-----HPFLGREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLL-SGDTYEAV 86 (325)
T ss_dssp HHHHHHHHHGG---GEEEEEEEEE-----ETTTTEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECT-TSCEEEEE
T ss_pred HHHHHHHHhCC---cEEEEEEEec-----CccCCCccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEeC-CCCEEEEE
Confidence 34566666666 9999987653 2454433345789999999 6799999999999999999995 89999999
Q ss_pred EEEeccCCCeEEEEeccccccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCC--ceeeeEE
Q 007213 189 VLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHG--STELLGL 264 (612)
Q Consensus 189 vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~--~~~~~~i 264 (612)
++++|+.+||||||++... .+++++|+++ ...|+.|+++|||.+... +++.|+|+...+.....+ .....+|
T Consensus 87 v~~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~-~v~~G~vs~~~~~~~~~g~~~~~~~~i 162 (325)
T 1lcy_A 87 VTAVDPVADIATLRIQTKE---PLPTLPLGRSADVRQGEFVVAMGSPFALQN-TITSGIVSSAQRPARDLGLPQTNVEYI 162 (325)
T ss_dssp EEEEETTTTEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEECCCTTSSSS-CCEEEEBCSCSCC---------CCCCE
T ss_pred EEEECCCCCEEEEEEcCCC---CCceEEecccccCCCCCEEEEEECCCCCCC-cEEeEEEecccccccccCCCCCCCCEE
Confidence 9999999999999998753 6889999874 467999999999998765 899999999876422111 1233579
Q ss_pred EEccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHHc------CcccCCCcCCeEEeeec
Q 007213 265 QIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKN------GAYTGFPLLGVEWQKME 338 (612)
Q Consensus 265 ~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~~------g~v~~~~~lGi~~~~~~ 338 (612)
|+|+.+++|||||||+|.+|+||||+++.. ..+++|+||++.++++|+++++. +.+. |+|||+.+..+
T Consensus 163 ~~d~~~~~G~SGGPl~~~~G~vVGI~s~~~----~~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~-r~~lGv~~~~l- 236 (325)
T 1lcy_A 163 QTDAAIDFGNAGGPLVNLDGEVIGVNTMKV----TAGISFAIPSDRLREFLHRGEKKNSSSGISGSQ-RRYIGVMMLTL- 236 (325)
T ss_dssp EESSCCSTTTTTSEEEETTSCEEEEEEEEE----ETTEEEEEEHHHHHHHTCC----------------EECCEEEEEC-
T ss_pred EEcCCCCCCCccccEECCCCEEEEEEeEee----cCCeeEEEEHHHHHHHHHHhhhccccccccccc-ccccceEeecC-
Confidence 999999999999999999999999999865 25689999999999999998764 3555 89999999999
Q ss_pred ChhhHHhhhccc-----CCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCE
Q 007213 339 NPDLRVAMSMKA-----DQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDS 412 (612)
Q Consensus 339 ~~~~~~~lgl~~-----~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~ 412 (612)
++++++.+++.. ...|++|.+|.++|||++ |||+||+|++|||++|.++.++ ...+.. +++
T Consensus 237 ~~~~~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~l----------~~~l~~---~~~ 303 (325)
T 1lcy_A 237 SPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDV----------YEAVRT---QSQ 303 (325)
T ss_dssp CHHHHHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHH----------HHHHTT---CSS
T ss_pred CHHHHHhhCccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHHH----------HHHHhC---CCe
Confidence 899999998853 247999999999999999 9999999999999999998774 245543 688
Q ss_pred EEEEEEECCEEEEEEEEec
Q 007213 413 AAVKVLRDSKILNFNITLA 431 (612)
Q Consensus 413 v~l~V~R~G~~~~~~v~l~ 431 (612)
+.|+|.|+|+.+++++++.
T Consensus 304 v~l~v~R~g~~~~~~v~~~ 322 (325)
T 1lcy_A 304 LAVQIRRGRETLTLYVTPE 322 (325)
T ss_dssp EEEEEEETTEEEEEEECCE
T ss_pred EEEEEEECCEEEEEEEEEe
Confidence 9999999999998888764
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=1.4e-42 Score=366.08 Aligned_cols=291 Identities=23% Similarity=0.378 Sum_probs=150.8
Q ss_pred chhHHhhhcccCCCcEEEEeeeeCCCCCCcccccCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEE
Q 007213 111 VEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATV 189 (612)
Q Consensus 111 ~~~~~~~v~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~v 189 (612)
+.+.++++.+ |||+|..... .+|.......+.||||||+ +||||||+|||.++..+.|.+. +++.+++++
T Consensus 16 ~~~~~~~~~~---sVV~I~~~~~-----~~~~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~~-~g~~~~a~~ 86 (332)
T 3num_A 16 IADVVEKIAP---AVVHIELFRK-----LPFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELK-NGATYEAKI 86 (332)
T ss_dssp HHHHHHHHGG---GEEEEEEEEE-----CTTSSCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEET-TSCEEEEEE
T ss_pred HHHHHHHhcC---cEEEEEEEec-----cccCCCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEEC-CCCEEEEEE
Confidence 4455566666 9999998764 3455555566899999999 6799999999999999999995 899999999
Q ss_pred EEeccCCCeEEEEeccccccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccC--CceeeeEEE
Q 007213 190 LAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVH--GSTELLGLQ 265 (612)
Q Consensus 190 v~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~--~~~~~~~i~ 265 (612)
++.|+.+|||||+++... .++++.|+++ ...|+.|+++|||.+... +++.|+|+...+..... ......+++
T Consensus 87 ~~~d~~~DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~~~i~ 162 (332)
T 3num_A 87 KDVDEKADIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQN-TVTTGIVSTTQRGGKELGLRNSDMDYIQ 162 (332)
T ss_dssp EEEETTTTEEEEEECCSS---CCCCCCBCCTTSCCTTCEEEEECC-----C-CEEEEEEEEC--------------CCEE
T ss_pred EEecCCCCeEEEEEcCCC---CCceeeecCcccCCCCCEEEEEECCCCCCc-ceeeeEEEeecccccccCcCCCcCCEEE
Confidence 999999999999998763 6788888764 456999999999998765 88999999876542211 122345799
Q ss_pred EccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHH---c--CcccCCCcCCeEEeeecCh
Q 007213 266 IDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK---N--GAYTGFPLLGVEWQKMENP 340 (612)
Q Consensus 266 ~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~---~--g~v~~~~~lGi~~~~~~~~ 340 (612)
+++.+++|+|||||+|.+|+||||+++.. ..+++|+||++.++++|+++.+ . +.+. ++|||+.+..+ +.
T Consensus 163 ~d~~i~~G~SGGPlv~~~G~vvGI~s~~~----~~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~-r~~lGi~~~~~-~~ 236 (332)
T 3num_A 163 TDAIINYGNAGGPLVNLDGEVIGINTLKV----TAGISFAIPSDKIKKFLTESHDRQAKGKAITK-KKYIGIRMMSL-TS 236 (332)
T ss_dssp ESSCCCTTTTTSEEEETTSCEEEEEEEEE----ETTEEEEEEHHHHHHHHHHHCC-------------------------
T ss_pred EECCcCCCCcHHHhhCCCCcEEEEEeeEe----cccceEEECHHHHHHHHHHHhhhhccCccccc-ccccceEEEec-CH
Confidence 99999999999999999999999999865 3579999999999999999852 2 2344 89999999988 66
Q ss_pred hhHHhhh-----cccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEE
Q 007213 341 DLRVAMS-----MKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAA 414 (612)
Q Consensus 341 ~~~~~lg-----l~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~ 414 (612)
+.++.++ ++....|++|.+|.++|||++ |||+||+|++|||++|.++.++. ..+. .|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~l~---~~~~v~ 303 (332)
T 3num_A 237 SKAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVS----------DVIK---RESTLN 303 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhhhhhhhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHH----------HHHh---CCCeEE
Confidence 6655543 334457999999999999999 99999999999999999998863 4443 378899
Q ss_pred EEEEECCEEEEEEEEeccC
Q 007213 415 VKVLRDSKILNFNITLATH 433 (612)
Q Consensus 415 l~V~R~G~~~~~~v~l~~~ 433 (612)
|+|+|+|+.+++++++..+
T Consensus 304 l~v~R~g~~~~~~v~p~~~ 322 (332)
T 3num_A 304 MVVRRGNEDIMITVIPEEI 322 (332)
T ss_dssp -------------------
T ss_pred EEEEECCEEEEEEEEEeee
Confidence 9999999999998887654
No 11
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=1e-32 Score=277.52 Aligned_cols=214 Identities=28% Similarity=0.368 Sum_probs=161.6
Q ss_pred chhHHhhhcccCCCcEEEEeeeeCCCCC-----Cccc-----c----cCCc-ceEEEEEEEe-CCEEEecccccCCCCeE
Q 007213 111 VEPGVARVVPAMDAVVKVFCVHTEPNFS-----LPWQ-----R----KRQY-SSSSSGFAIG-GRRVLTNAHSVEHYTQV 174 (612)
Q Consensus 111 ~~~~~~~v~~~~~SVV~I~~~~~~~~~~-----~p~~-----~----~~~~-~~~GSGfiI~-~g~ILT~aHvV~~~~~i 174 (612)
+.+.++++.+ |||+|.......... .||. . .... .+.||||||+ +||||||+|||.++..+
T Consensus 6 ~~~~~~~~~p---sVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~~i 82 (239)
T 1l1j_A 6 IVNVVEACAP---AVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNI 82 (239)
T ss_dssp HHHHHHHHGG---GEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCSSC
T ss_pred HHHHHHHhCC---CEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCCEE
Confidence 4556666666 999999875432110 1221 0 1122 5789999999 58999999999999999
Q ss_pred EEEEcCCCcEEEEEEEEeccCCCeEEEEeccccccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeee
Q 007213 175 KLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEIL 252 (612)
Q Consensus 175 ~V~~~~~g~~~~a~vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~ 252 (612)
.|++. +++.++++++++|+.+||||||++... ..+++++|+++ ...|+.|+++|||.+... +++.|+|+...+.
T Consensus 83 ~V~~~-~g~~~~a~vv~~d~~~DlAllkl~~~~--~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~-~vt~Givs~~~r~ 158 (239)
T 1l1j_A 83 TVTML-DGSKYDAEYIGGDEELDIAVIKIKASD--KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQH-TVTVGVVSATNRR 158 (239)
T ss_dssp EEECT-TSCEEEBCCCEEETTTTEEEEEBCCSS--SCCCCCEECCGGGCCTTCEEEEEECTTSSSC-EEEEEEEEEEEEE
T ss_pred EEEEC-CCCEEEEEEEEEcCCCCEEEEEEcCCC--CCCceEEecCccCCccccEEEEEECCCCCCC-cEEEEEEeccccc
Confidence 99995 899999999999999999999998752 26899999874 367999999999998765 8999999998765
Q ss_pred cccCC--ceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHHcCcccCCCcC
Q 007213 253 SYVHG--STELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLL 330 (612)
Q Consensus 253 ~~~~~--~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~~g~v~~~~~l 330 (612)
..... .....+||+|+++++|||||||+|.+|+||||+++.+...+..+++|+||++.+++++++|+++|++. ||||
T Consensus 159 ~~~~~~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~v~-r~~l 237 (239)
T 1l1j_A 159 IPKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILTQKKVE-KAYL 237 (239)
T ss_dssp EECTTSSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC----------
T ss_pred cccCCCccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHHHCCCCc-ccee
Confidence 22111 12346899999999999999999999999999998765223468999999999999999999999998 9999
Q ss_pred Ce
Q 007213 331 GV 332 (612)
Q Consensus 331 Gi 332 (612)
|+
T Consensus 238 Gv 239 (239)
T 1l1j_A 238 GV 239 (239)
T ss_dssp --
T ss_pred Cc
Confidence 96
No 12
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=1.6e-32 Score=276.93 Aligned_cols=210 Identities=27% Similarity=0.377 Sum_probs=154.4
Q ss_pred CchhHHhhhcccCCCcEEEEeeeeCCC-----------C--CCcccccCCcceEEEEEEEe-C-CEEEecccccCCCCeE
Q 007213 110 DVEPGVARVVPAMDAVVKVFCVHTEPN-----------F--SLPWQRKRQYSSSSSGFAIG-G-RRVLTNAHSVEHYTQV 174 (612)
Q Consensus 110 ~~~~~~~~v~~~~~SVV~I~~~~~~~~-----------~--~~p~~~~~~~~~~GSGfiI~-~-g~ILT~aHvV~~~~~i 174 (612)
++.+.++++.+ |||.|........ + ..||+......+.||||||+ + ||||||+|||.++..+
T Consensus 14 ~~~~~~~~~~p---aVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i 90 (245)
T 3sti_A 14 SLAPMLEKVLP---AVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKI 90 (245)
T ss_dssp BSHHHHHHHGG---GEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----CE
T ss_pred CHHHHHHHhCC---ceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEE
Confidence 46677777777 9999988764321 0 12343334456789999998 5 8999999999999999
Q ss_pred EEEEcCCCcEEEEEEEEeccCCCeEEEEeccccccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeee
Q 007213 175 KLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEIL 252 (612)
Q Consensus 175 ~V~~~~~g~~~~a~vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~ 252 (612)
.|.+. +++.+++++++.|+.+||||||++... .++++.|+++ ...|++|+++|||.+... +++.|+|+...+.
T Consensus 91 ~V~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~-~vt~G~vs~~~~~ 165 (245)
T 3sti_A 91 SIQLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLGQ-TATSGIVSALGRS 165 (245)
T ss_dssp EEECT-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGSCC-EEEEEEEEECSSC
T ss_pred EEEEC-CCCEEEEEEEEecCCCCEEEEEeccCC---CCceeeecCcCCCCCCCEEEEEECCCCCCC-cEEeeEEeeeccc
Confidence 99994 899999999999999999999997643 6889999864 467999999999999765 8999999998765
Q ss_pred cccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCC-ccceeecccChhhHHHHHHHHHHcCcccCCCc
Q 007213 253 SYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPL 329 (612)
Q Consensus 253 ~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~-~~~~~~~aIPi~~i~~~l~~l~~~g~v~~~~~ 329 (612)
... ......+||+|+.+++|||||||||.+|+||||+++.+... +..+++||||++.+++++++|++.|++. ++|
T Consensus 166 ~~~-~~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~-~~~ 241 (245)
T 3sti_A 166 GLN-LEGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIL-EHH 241 (245)
T ss_dssp SSC-CTTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC----
T ss_pred ccC-CCCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCC-Ccc
Confidence 221 12223579999999999999999999999999999877543 4568999999999999999999998876 554
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=99.97 E-value=1.6e-30 Score=261.19 Aligned_cols=207 Identities=24% Similarity=0.369 Sum_probs=169.6
Q ss_pred CchhHHhhhcccCCCcEEEEeeeeCCCCCCcccccCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEE
Q 007213 110 DVEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLAT 188 (612)
Q Consensus 110 ~~~~~~~~v~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~ 188 (612)
++.+.++++.+ |||+|........ |.......+.||||+|+ +||||||+|||.+...+.|.+. +++.++++
T Consensus 21 ~~~~~~~~~~~---sVV~I~~~~~~~~----~~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~~-~g~~~~a~ 92 (237)
T 3lgi_A 21 SYNLAVRRAAP---AVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DGRVFEAL 92 (237)
T ss_dssp BCHHHHHHHGG---GEEEEEEECCTTT----CTTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEECT-TSCEEEEE
T ss_pred CHHHHHHHhCC---cEEEEEEEecccC----cccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEeC-CCCEEEEE
Confidence 45667777777 9999998875443 22334456789999999 6799999999999999999994 89999999
Q ss_pred EEEeccCCCeEEEEeccccccCCeeeeEcCC--CCCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEE
Q 007213 189 VLAIGTECDIAMLTVEDDEFWEGVLPVEFGE--LPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQI 266 (612)
Q Consensus 189 vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~--~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~ 266 (612)
++..|+.+||||||++... .++++.|++ ....|+.|+++|||.+... +++.|+|+...+..... .....++++
T Consensus 93 vv~~d~~~DlAll~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~-~~~~g~vs~~~~~~~~~-~~~~~~i~~ 167 (237)
T 3lgi_A 93 LVGSDSLTDLAVLKINATG---GLPTIPINARRVPHIGDVVLAIGNPYNLGQ-TITQGIISATGRIGLNP-TGRQNFLQT 167 (237)
T ss_dssp EEEEETTTTEEEEECCCSS---CCCCCCCCTTCCCCTTBEEEEEECGGGSCS-EEEEEEEEEECCSSCCT-TSCSCCEEE
T ss_pred EEEEcCCCCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEECCCCCCC-cEEEEEEEecccccccC-CCcCCEEEE
Confidence 9999999999999998763 578888875 3466999999999998665 89999999887654322 223357999
Q ss_pred ccCCCCCCCCCeEecCCCeEEEEEecccCCC----ccceeecccChhhHHHHHHHHHHcCcccCCCcC
Q 007213 267 DAAINSGNSGGPAFNDKGKCVGIAFQSLKHE----DVENIGYVIPTPVIMHFIQDYEKNGAYTGFPLL 330 (612)
Q Consensus 267 da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~----~~~~~~~aIPi~~i~~~l~~l~~~g~v~~~~~l 330 (612)
|+.+++|+|||||||.+|+||||+++.+... ...+++|+||++.+++++++|+++|++. ++|+
T Consensus 168 d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~-~~~~ 234 (237)
T 3lgi_A 168 DASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI-RHHH 234 (237)
T ss_dssp CSCCCTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCC-C---
T ss_pred cCccCCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCC-Cchh
Confidence 9999999999999999999999999876543 2567899999999999999999999987 5553
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=99.96 E-value=4e-29 Score=250.10 Aligned_cols=194 Identities=26% Similarity=0.425 Sum_probs=155.9
Q ss_pred CchhHHhhhcccCCCcEEEEeeeeCCCCCCcccccCCcceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEE
Q 007213 110 DVEPGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLAT 188 (612)
Q Consensus 110 ~~~~~~~~v~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~ 188 (612)
.+.+.++++.+ |||+|...... ||.......+.||||+|+ +||||||+|||.+...+.|.+. +++.+.++
T Consensus 32 ~~~~~~~~~~~---sVV~I~~~~~~-----~~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~~-~g~~~~a~ 102 (231)
T 3tjo_A 32 FIADVVEKIAP---AVVHIELFRKL-----PFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELK-NGATYEAK 102 (231)
T ss_dssp HHHHHHHHHGG---GEEEEEEEEEC-----TTSSCEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEECT-TSCEEEEE
T ss_pred HHHHHHHHhcC---cEEEEEEEecc-----ccCCCccccceEEEEEEeCCCEEEEchhcccCCceEEEEcC-CCCEEEEE
Confidence 45566666666 99999987642 344444445789999999 5799999999999999999994 89999999
Q ss_pred EEEeccCCCeEEEEeccccccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccC--CceeeeEE
Q 007213 189 VLAIGTECDIAMLTVEDDEFWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVH--GSTELLGL 264 (612)
Q Consensus 189 vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~--~~~~~~~i 264 (612)
++..|+.+||||||++... .++++.|+++ ...|+.|+++|||.+... +++.|+|+...+..... ......++
T Consensus 103 v~~~d~~~DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~-~~~~g~vs~~~~~~~~~~~~~~~~~~i 178 (231)
T 3tjo_A 103 IKDVDEKADIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQN-TVTTGIVSTTQRGGKELGLRNSDMDYI 178 (231)
T ss_dssp EEEEETTTTEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEEEEEEETTEE-EEEEEEEEECC-------------CCE
T ss_pred EEEecCCCCEEEEEecCCC---CCCceecCCcCCCCCCCEEEEEECCCCCCC-ceeeEEEeeccccccccccCCCcccEE
Confidence 9999999999999998653 6788888764 466999999999998654 88999999876543211 12233579
Q ss_pred EEccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 265 QIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 265 ~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
++|+.+++|+|||||||.+|+||||+++.. ..+++||||++.++++|+++++
T Consensus 179 ~~da~i~~G~SGGPLv~~~G~vVGI~s~~~----~~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 179 QTDAIINYGNAGGPLVNLDGEVIGINTLKV----TAGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp EESSCCCTTTTTSEEECTTSCEEEEEEEEE----ETTEEEEEEHHHHHHHHHHHHT
T ss_pred EEcCCcCCCCchhHeecCCCeEEEEEeEEe----cCCeEEEEEHHHHHHHHHHHhh
Confidence 999999999999999999999999999854 3579999999999999999874
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.95 E-value=1.1e-26 Score=233.21 Aligned_cols=191 Identities=27% Similarity=0.380 Sum_probs=152.8
Q ss_pred hHHhhhcccCCCcEEEEeeeeCCCCCCcccccCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEe
Q 007213 113 PGVARVVPAMDAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAI 192 (612)
Q Consensus 113 ~~~~~v~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~ 192 (612)
+.++++.+ |||+|...... ....+.||||+|+++|||||+|||.+...+.|.+. + ..+.++++.+
T Consensus 35 ~~~~~~~~---svV~I~~~~~~----------~~~~~~GsG~iI~~~~VlTaaH~v~~~~~~~V~~~-~-~~~~~~~v~~ 99 (237)
T 3k6y_A 35 PVVAATEP---SVVKIRSLAPR----------CQKVLEGTGFVISPDRVMTNAHVVAGSNNVTVYAG-D-KPFEATVVSY 99 (237)
T ss_dssp HHHHHHGG---GEEEEEEEEGG----------GTEEEEEEEEEEETTEEEECGGGTTTCSEEEEEET-T-EEEECEEEEE
T ss_pred HHHHHhcC---CEEEEEEEecC----------CCcceeEEEEEEECCEEEECHHHcCCCceEEEEEC-C-cEEEEEEEEE
Confidence 45666666 99999987521 13456899999999999999999999999999995 4 5889999999
Q ss_pred ccCCCeEEEEeccccccCCeeeeEcCC-CCCCCCeEEEEEeCCCCCceeEEEEEEeceeee----cccCCc-eeeeEEEE
Q 007213 193 GTECDIAMLTVEDDEFWEGVLPVEFGE-LPALQDAVTVVGYPIGGDTISVTSGVVSRIEIL----SYVHGS-TELLGLQI 266 (612)
Q Consensus 193 d~~~DLAlLkv~~~~~~~~l~pl~l~~-~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~----~~~~~~-~~~~~i~~ 266 (612)
|+.+||||||++.. .++++.|++ ....|+.|+++|||.+... +...|.++..... .+..+. ....++++
T Consensus 100 ~~~~DiAll~l~~~----~~~~~~l~~~~~~~G~~v~v~G~p~g~~~-~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (237)
T 3k6y_A 100 DPSVDVAILAVPHL----PPPPLVFAAEPAKTGADVVVLGYPGGGNF-TATPARIREAIRLSGPDIYGDPEPVTRDVYTI 174 (237)
T ss_dssp ETTTTEEEEECTTC----CSCCCCBCSSCCCTTCEEEEEECGGGCSC-EEEEEEEEEEEEEEECCTTCCSSCEEEEEEEE
T ss_pred cCCCCEEEEEeCCC----CCCceecCCCCCCCCCEEEEEECCCCCCC-ccceeEEEeeEeecccccccCCCcccccEEEe
Confidence 99999999999854 578888864 4467999999999988654 6777777655322 122222 34467899
Q ss_pred ccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHHcCccc
Q 007213 267 DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKNGAYT 325 (612)
Q Consensus 267 da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~~g~v~ 325 (612)
++.+++|+|||||+|.+|+||||+++... +..+++|+||++.++++|+++.....+.
T Consensus 175 ~~~~~~GdSGGPLv~~~G~vvGI~s~~~~--~~~~~~~aip~~~v~~~l~~~~~~~~v~ 231 (237)
T 3k6y_A 175 RADVEQGDSGGPLIDLNGQVLGVVFGAAI--DDAETGFVLTAGEVAGQLAKIGATQPVG 231 (237)
T ss_dssp ESCCCTTCTTCEEECTTSCEEEEEEEECS--SSTTEEEEEEHHHHHGGGGGTTCCSCCC
T ss_pred cCccCCCccHHHEECCCCEEEEEEEeecc--CCCcEEEEEEHHHHHHHHHHccCCCCCC
Confidence 99999999999999999999999998654 4457899999999999999996555543
No 16
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.89 E-value=2.9e-23 Score=204.37 Aligned_cols=182 Identities=26% Similarity=0.456 Sum_probs=141.1
Q ss_pred CCcEEEEeeeeCCCCCCcccccCCcceEEEEEEEeCCEEEecccccCCCC---eEEEEEc---CCCcEEEE-EEEEeccC
Q 007213 123 DAVVKVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYT---QVKLKKR---GSDTKYLA-TVLAIGTE 195 (612)
Q Consensus 123 ~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~~~---~i~V~~~---~~g~~~~a-~vv~~d~~ 195 (612)
+++|+|.. ...+||+... ....||||+|+++||||||||+.+.. .+.|.+. .+++.+.+ +++.+|+.
T Consensus 3 ~~~~~i~~-----~~~~P~~v~~-~~~~c~G~lI~~~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~~ 76 (210)
T 2as9_A 3 KNVTQVKD-----TNNFPYNGVV-SFKDATGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGD 76 (210)
T ss_dssp CCEEECSC-----TTSTTGGGEE-ECSSCEEEEEETTEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSSS
T ss_pred CceEEeec-----CCcCCeEEEE-EeeeEEEEEEeCCEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCCC
Confidence 46777744 3478898753 34689999999999999999997543 5666542 36778887 48888999
Q ss_pred CCeEEEEecccc---------ccCCeeeeEcCCCCCCCCeEEEEEeCCCCCc---eeEEEEEEeceeeecccCCceeeeE
Q 007213 196 CDIAMLTVEDDE---------FWEGVLPVEFGELPALQDAVTVVGYPIGGDT---ISVTSGVVSRIEILSYVHGSTELLG 263 (612)
Q Consensus 196 ~DLAlLkv~~~~---------~~~~l~pl~l~~~~~~G~~V~aiG~p~g~~~---~sv~~GiIs~~~~~~~~~~~~~~~~ 263 (612)
+|||||+++... +.+.++++.|.+....|+.++++|||.+... ..+..|+|+.... .+
T Consensus 77 ~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~~----------~~ 146 (210)
T 2as9_A 77 EDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKD----------NI 146 (210)
T ss_dssp SSCEEEEECSEEEEEETTEEEGGGSCCCCCBCSCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEET----------TE
T ss_pred CcEEEEEecCccccccccccccccccceeecCCCCCCCCEEEEEeCCCCCCCCcceEEeeeEEccccC----------Ce
Confidence 999999998631 2335778888765677999999999986432 2457788876521 35
Q ss_pred EEEccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 264 LQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 264 i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
+++++.+++|+|||||+|.+|+||||++.+....+.+..+|++|++.|++|++....
T Consensus 147 i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~~ 203 (210)
T 2as9_A 147 LNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHIE 203 (210)
T ss_dssp EEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTTCSSEEEEECCHHHHHHHHTTCC
T ss_pred EEEcCccCCCCccCcEECCCCeEEEEEecccccCCccccccEEEcHHHHHHHHHhhh
Confidence 788999999999999999899999999997765555677899999999999987643
No 17
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.88 E-value=2.8e-22 Score=189.43 Aligned_cols=137 Identities=25% Similarity=0.300 Sum_probs=106.1
Q ss_pred cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEeccccccCCeeeeEcCCCCCCCCe
Q 007213 147 YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQDA 226 (612)
Q Consensus 147 ~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~~~~G~~ 226 (612)
..+.||||+| +||||||+|||.++..+.|++ +++.++|+++ .|+.+||||||++... ..+.+++|+++... +.
T Consensus 19 ~~~~GSGfii-~g~IlTn~HVV~~~~~i~V~~--dg~~~~a~vv-~d~~~DlAlLkv~~~~--~~~~~l~l~~~~~~-~~ 91 (163)
T 2w5e_A 19 PEGKGTGFFS-GNDIVTAAHVVGNNTFVNVCY--EGLMYEAKVR-YMPEKDIAFITCPGDL--HPTARLKLSKNPDY-SC 91 (163)
T ss_dssp TTEEEEEEEE-TTEEEEEHHHHTTCSEEEEEE--TTEEEEEEEE-ECCSSSEEEEECCTTC--CCSCCCCBCSSCCT-TE
T ss_pred CceeEEEEEE-CCEEEecHHHhCCCceEEEEE--CCEEEEEEEE-EECCCCEEEEEecCCC--CCcceEEcCCCCCC-CE
Confidence 4568999999 999999999999999999998 8999999999 8999999999998753 24566778876554 88
Q ss_pred EEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeeccc
Q 007213 227 VTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVI 306 (612)
Q Consensus 227 V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aI 306 (612)
|+++|+|.+.-..+...+.+ .+ ..+++++++++|||||||||.+|+||||+++.. +..+ +|+|
T Consensus 92 v~~~G~p~~~~~~s~~~~~~---------~g----~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~---g~~g-g~ai 154 (163)
T 2w5e_A 92 VTVMAYVNEDLVVSTAAAMV---------YG----NTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNT---GYTG-GAVI 154 (163)
T ss_dssp EEEEEEETTEEEEEEEEEEE---------ET----TEEEEECSCSSCCTTCEEECTTSCEEEEEEEEE---TTEE-EEEE
T ss_pred EEEEEeCCCCEEEEEeccEE---------cC----CeEEEEEEeCCCCchhhEEcCCCEEEEEEccCc---cccc-CEEE
Confidence 99999997621111111111 11 236677999999999999999999999998743 3344 6665
Q ss_pred C
Q 007213 307 P 307 (612)
Q Consensus 307 P 307 (612)
.
T Consensus 155 ~ 155 (163)
T 2w5e_A 155 I 155 (163)
T ss_dssp C
T ss_pred e
Confidence 4
No 18
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.82 E-value=2.4e-20 Score=181.61 Aligned_cols=171 Identities=23% Similarity=0.420 Sum_probs=123.1
Q ss_pred CCCCCcccccCCcceEEEEEEEeCCEEEecccccCCCC----eEEEEEc---CCCcEEEE-EEEEeccCCCeEEEEeccc
Q 007213 135 PNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYT----QVKLKKR---GSDTKYLA-TVLAIGTECDIAMLTVEDD 206 (612)
Q Consensus 135 ~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~~~----~i~V~~~---~~g~~~~a-~vv~~d~~~DLAlLkv~~~ 206 (612)
....+||+.... .+.|+||+|+++||||||||+.+.. .+.+.+. .+++.+.+ +++.+|+.+||||||++..
T Consensus 9 ~~~~~P~~v~~~-~~~c~G~lI~~~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~ 87 (200)
T 2w7s_A 9 DATKEPYNSVVA-FVGGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHET 87 (200)
T ss_dssp CTTSTTGGGEEE-ETTEEEEEEETTEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSB
T ss_pred ccccCCcccccc-cceEEEEEEECCEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCC
Confidence 345789987543 4579999999999999999997533 2554431 35677776 5788899999999999864
Q ss_pred -----cccCCeeeeEcCCCCCCCCeEEEEEeCCCCCc---eeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCe
Q 007213 207 -----EFWEGVLPVEFGELPALQDAVTVVGYPIGGDT---ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGP 278 (612)
Q Consensus 207 -----~~~~~l~pl~l~~~~~~G~~V~aiG~p~g~~~---~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGP 278 (612)
.+.+.++|+.|.+....|+.++++|||.+... ..+..|+++.... .++++++.+++|+||||
T Consensus 88 ~~~~~~~~~~v~pi~l~~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~~----------~~~~~~~~~~~GdSGGP 157 (200)
T 2w7s_A 88 STEGLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISG----------TFMEFDAYAQPGNSGSP 157 (200)
T ss_dssp CTTSCBGGGSCCCCCBCCCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEET----------TEEEECSCCCTTCTTCE
T ss_pred CCCcccccccccceeccccCCCCCEEEEEECCCCCCCccceEEeEEEEEccCC----------CEEEEcceeCCCCccCe
Confidence 23346888888765677999999999976322 2456788876421 24788999999999999
Q ss_pred EecCCCeEEEEEecccCCCccceeeccc-ChhhHHHHHHH
Q 007213 279 AFNDKGKCVGIAFQSLKHEDVENIGYVI-PTPVIMHFIQD 317 (612)
Q Consensus 279 lvn~~G~VIGI~~~~~~~~~~~~~~~aI-Pi~~i~~~l~~ 317 (612)
|+|.+|+||||++.+... +....+|++ ..+.+++++++
T Consensus 158 l~~~~g~lvGI~s~g~~~-~~~~~~~~v~~~~~~~~wI~~ 196 (200)
T 2w7s_A 158 VLNSKHELIGILYAGSGK-DESEKNFGVYFTPQLKEFIQN 196 (200)
T ss_dssp EECTTSCEEEEEEEEC-----CCCEEEEECCHHHHHHHHH
T ss_pred EECcCCEEEEEEeccccC-CCCccceeeecHHHHHHHHHh
Confidence 999899999999986532 112334444 33666666654
No 19
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.81 E-value=5.6e-20 Score=184.57 Aligned_cols=162 Identities=23% Similarity=0.354 Sum_probs=116.1
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCe--EEEEEc--C----CC------cEEEEEEEEecc---CCCeEEEEecccc---
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHYTQ--VKLKKR--G----SD------TKYLATVLAIGT---ECDIAMLTVEDDE--- 207 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~~~--i~V~~~--~----~g------~~~~a~vv~~d~---~~DLAlLkv~~~~--- 207 (612)
...|+||+|+++||||||||+.+... +.|.+. . ++ ..+.++.+..++ .+|||||+++.+.
T Consensus 54 ~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~~ 133 (242)
T 1agj_A 54 QTSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNGV 133 (242)
T ss_dssp TEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTSC
T ss_pred CccEEEEEEeCCEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCccc
Confidence 46899999999999999999975432 344442 1 11 357888888888 8999999998753
Q ss_pred -ccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCC
Q 007213 208 -FWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKG 284 (612)
Q Consensus 208 -~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G 284 (612)
+...++++.|++. ...|+.++++|||.+..........+.-.. . . ..+++++.+|+|+|||||++.+|
T Consensus 134 ~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~---~--~----~~~~~~~~~c~GdSGGPl~~~~g 204 (242)
T 1agj_A 134 SLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTT---L--S----RGLRYYGFTVPGNSGSGIFNSNG 204 (242)
T ss_dssp CHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECC---G--G----GSEEEECCCCGGGTTCEEECTTS
T ss_pred cccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEec---C--C----ceEEEeCCcCCCCCchHhcccCC
Confidence 2235789999753 356999999999987543122222222111 1 0 23677889999999999999899
Q ss_pred eEEEEEecccCCC-ccceeecccChh-hHHHHHHHH
Q 007213 285 KCVGIAFQSLKHE-DVENIGYVIPTP-VIMHFIQDY 318 (612)
Q Consensus 285 ~VIGI~~~~~~~~-~~~~~~~aIPi~-~i~~~l~~l 318 (612)
+||||++.+.... +..+.+|++|++ .++++|++.
T Consensus 205 ~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 205 ELVGIHSSKVSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp EEEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred EEEEEEeccccccCcCCCceeeEEehHHHHHHHHhh
Confidence 9999999866432 345778888885 788788764
No 20
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.80 E-value=4e-19 Score=173.01 Aligned_cols=173 Identities=26% Similarity=0.441 Sum_probs=121.8
Q ss_pred CCCCCcccccCCcceEEEEEEEeCCEEEecccccCCCC---eEEEEEc---CCCcEEE-EEEEEeccCCCeEEEEecccc
Q 007213 135 PNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYT---QVKLKKR---GSDTKYL-ATVLAIGTECDIAMLTVEDDE 207 (612)
Q Consensus 135 ~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~~~---~i~V~~~---~~g~~~~-a~vv~~d~~~DLAlLkv~~~~ 207 (612)
....+||+... ..+.||||+|+++||||||||+.+.. .+.+... .++..+. ++++.++..+||||||++...
T Consensus 9 ~~~~~P~~~~~-~~~~c~G~lI~~~~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~ 87 (204)
T 2vid_A 9 DTNIFPYTGVV-AFKSATGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERA 87 (204)
T ss_dssp CTTSTTGGGEE-ECSSCEEEEEETTEEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEE
T ss_pred cCCcCchhheE-EeeeEEEEEEECCEEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCcc
Confidence 34578998743 34689999999999999999998654 5555321 2456666 577778889999999998531
Q ss_pred ---------ccCCeeeeEcCCCCCCCCeEEEEEeCCCCCc---eeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCC
Q 007213 208 ---------FWEGVLPVEFGELPALQDAVTVVGYPIGGDT---ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNS 275 (612)
Q Consensus 208 ---------~~~~l~pl~l~~~~~~G~~V~aiG~p~g~~~---~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~S 275 (612)
+.+.++|+.|.+....|+.++++|||.+... .....|.|+.... .+++.++.+++|+|
T Consensus 88 ~~~~~~~~~~~~~v~pi~l~~~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~~----------~~~~~~~~~~~GdS 157 (204)
T 2vid_A 88 IERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEG----------SSIVYSAHTESGNS 157 (204)
T ss_dssp EEEETTEEEHHHHCCCCCBCSCCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEET----------TEEEECCCCCGGGT
T ss_pred cccccccccccccccccccCCcCCCCCEEEEEeCCCCCCCCcceEeeccEEeeccC----------CeEEEecccCCCCc
Confidence 1224578888765677999999999986442 1355677765421 25788899999999
Q ss_pred CCeEecCCCeEEEEEecccCCCccceeeccc-ChhhHHHHHHHH
Q 007213 276 GGPAFNDKGKCVGIAFQSLKHEDVENIGYVI-PTPVIMHFIQDY 318 (612)
Q Consensus 276 GGPlvn~~G~VIGI~~~~~~~~~~~~~~~aI-Pi~~i~~~l~~l 318 (612)
||||++.+|+||||++.+.........+|++ +...+++++++.
T Consensus 158 GGPl~~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~~~~~wI~~~ 201 (204)
T 2vid_A 158 GSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAEN 201 (204)
T ss_dssp TCEEECTTSCEEEEEEEECC---CCCCEEEECCCHHHHHHHHHH
T ss_pred cCcEECCCCeEEEEEecCccCCCcccccceeEeCHHHHHHHHhh
Confidence 9999998999999999865311122334433 336677777654
No 21
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.78 E-value=1.6e-19 Score=165.28 Aligned_cols=124 Identities=25% Similarity=0.412 Sum_probs=108.9
Q ss_pred ceeecccChhhHHHHHHHHHHcCcccCCCcCCeEEeeecC--hhhHHhhhcccC-CCccEEEEecCCCcccCCCCCCCEE
Q 007213 300 ENIGYVIPTPVIMHFIQDYEKNGAYTGFPLLGVEWQKMEN--PDLRVAMSMKAD-QKGVRIRRVDPTAPESEVLKPSDII 376 (612)
Q Consensus 300 ~~~~~aIPi~~i~~~l~~l~~~g~v~~~~~lGi~~~~~~~--~~~~~~lgl~~~-~~G~~V~~V~p~spA~~GL~~GDiI 376 (612)
+|+|||||++.+++++++|.++|++. |+|||+.++.+.. .++++.+|++.. ..|++|..|.++|||+.||++||+|
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~-r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~aGL~~GD~I 80 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVT-RPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPANGHLEKYDVI 80 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSS-CCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGGTTSCSSCEE
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEe-eeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchHHCCCCCCEE
Confidence 57899999999999999999999998 9999999998832 278889999842 5799999999999998899999999
Q ss_pred EEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEeccCc
Q 007213 377 LSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATHR 434 (612)
Q Consensus 377 laInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~~~~ 434 (612)
++|||++|.+|.++ ...+....+|++++|+|.|+|+.+++++++...+
T Consensus 81 ~~inG~~v~~~~~l----------~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 128 (134)
T 2l97_A 81 TKVDDKEIASSTDL----------QSALYNHSIGDTIKITYYRNGKEETTSIKLNKLE 128 (134)
T ss_dssp EEETTEECCCHHHH----------HHHHHHSSTTCEEEEEEEETTEEEEEEEECCCC-
T ss_pred EEECCEEcCCHHHH----------HHHHHhCCCCCEEEEEEEECCEEEEEEEEEcccC
Confidence 99999999998874 3666666689999999999999999999987653
No 22
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.77 E-value=1.2e-17 Score=171.03 Aligned_cols=159 Identities=23% Similarity=0.335 Sum_probs=117.8
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCe----EEEEEc-------CCCcEEEEEEEEeccCCCeEEEEecccc----ccCCe
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHYTQ----VKLKKR-------GSDTKYLATVLAIGTECDIAMLTVEDDE----FWEGV 212 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~~~----i~V~~~-------~~g~~~~a~vv~~d~~~DLAlLkv~~~~----~~~~l 212 (612)
.+.|+||+|+++|||||||||.+... +.|.+. .++....++++..+..+||||||++... +...+
T Consensus 33 ~~~C~G~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v 112 (274)
T 2o8l_A 33 TFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVV 112 (274)
T ss_dssp EEEEEEEEEETTEEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCTTTSS
T ss_pred CEEEEEEEEECCEEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeCCCCCcEEEEEecCccccccccccc
Confidence 46899999999999999999976543 777653 2344455677788888999999998652 44578
Q ss_pred eeeEcCCC--CCCCCeEEEEEeCCCCCc--eeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEE
Q 007213 213 LPVEFGEL--PALQDAVTVVGYPIGGDT--ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVG 288 (612)
Q Consensus 213 ~pl~l~~~--~~~G~~V~aiG~p~g~~~--~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIG 288 (612)
+++.|... ...|+.++++|||.+... .....|.|+.... .+++.++.+|.|+||||||+.+|+|||
T Consensus 113 ~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~----------~~i~~~~~~c~GdSGGPLv~~~g~lvG 182 (274)
T 2o8l_A 113 KPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLKG----------EAMQYDLSTTGGNSGSPVFNEKNEVIG 182 (274)
T ss_dssp CCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEET----------TEEEESCCCCTTCTTCEEECTTSCEEE
T ss_pred ccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecCC----------CeEEeCcccCCCCchhheeccCCeEEE
Confidence 99999863 356999999999976432 2345676665321 257888999999999999998999999
Q ss_pred EEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 289 IAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 289 I~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
|++++... ..+.++.+. ..++.++++..
T Consensus 183 IvS~G~~~--~~~~~~~~~-~~~~~wI~~~i 210 (274)
T 2o8l_A 183 IHWGGVPN--EFNGAVFIN-ENVRNFLKQNI 210 (274)
T ss_dssp EEEEEETT--TEEEEEECC-HHHHHHHHHHC
T ss_pred EEeCcccC--CCCceEEec-HHHHHHHHHHH
Confidence 99986542 234556663 55677776654
No 23
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.77 E-value=9.4e-18 Score=163.54 Aligned_cols=152 Identities=16% Similarity=0.158 Sum_probs=116.7
Q ss_pred EEEEEeC---CEEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEeccccccCCeeee-------EcC--
Q 007213 152 SGFAIGG---RRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVEDDEFWEGVLPV-------EFG-- 218 (612)
Q Consensus 152 SGfiI~~---g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DLAlLkv~~~~~~~~l~pl-------~l~-- 218 (612)
+||++.+ +|||||+||+.+...+. . + ..+.++++..| +..|+||||++.... ..+.+ .+.
T Consensus 19 ~Gf~v~~~~~~~ilTa~Hc~~~~~~v~--~--~-~~~~g~vv~~~~~~~D~Avi~i~~~~~--~~~~v~~~g~~~~v~g~ 91 (198)
T 2h5c_A 19 VGFSVTRGATKGFVTAGHCGTVNATAR--I--G-GAVVGTFAARVFPGNDRAWVSLTSAQT--LLPRVANGSSFVTVRGS 91 (198)
T ss_dssp CCEEEEETTEEEEEECGGGCCTTCEEE--E--T-TEEEEEEEEEECSBSCEEEEEECTTSE--EEEEEEETTEEEECCBC
T ss_pred cCEEEecCCeeEEEECcccCCCCCEEE--e--C-CcEEEEEEecCCCCCCEEEEEeCCCCc--cCceEecCCceEEecCc
Confidence 5999963 59999999999888775 2 4 47889999999 999999999986521 12222 333
Q ss_pred CCCCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecc-cCCC
Q 007213 219 ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQS-LKHE 297 (612)
Q Consensus 219 ~~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~-~~~~ 297 (612)
..+.+|+.|..+|+|.+ ++.|+|+.+++...........++++++.+++|||||||+|.+|++|||+++. +...
T Consensus 92 ~~~~vG~~V~~~G~~tg-----~t~G~V~~~~~~~~~~~g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~~~ 166 (198)
T 2h5c_A 92 TEAAVGAAVCRSGRTTG-----YQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSN 166 (198)
T ss_dssp CCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCCTT
T ss_pred ccCCCCCeEEEeecCcc-----eEEEEEEeeeeEEEeCCCeEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCccC
Confidence 25678999999999866 57899999877543222223467999999999999999999899999999986 3221
Q ss_pred -------ccceeecccChhhHHHHH
Q 007213 298 -------DVENIGYVIPTPVIMHFI 315 (612)
Q Consensus 298 -------~~~~~~~aIPi~~i~~~l 315 (612)
...+++|++|++.++..+
T Consensus 167 ~~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 167 GNNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp SBSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred CCccccccCCceEEEEEHHHHHHHC
Confidence 234689999999987654
No 24
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.76 E-value=1.5e-17 Score=169.65 Aligned_cols=160 Identities=23% Similarity=0.343 Sum_probs=118.3
Q ss_pred ceEEEEEEEeCCEEEecccccCCCC----eEEEEEc-------CCCcEEEEEEEEeccCCCeEEEEecccc----ccCCe
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHYT----QVKLKKR-------GSDTKYLATVLAIGTECDIAMLTVEDDE----FWEGV 212 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~~----~i~V~~~-------~~g~~~~a~vv~~d~~~DLAlLkv~~~~----~~~~l 212 (612)
.+.|+||+|+++|||||||||.+.. .+.|.+. .++....++++..+..+||||||+.... +...+
T Consensus 33 ~~~CgG~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v 112 (268)
T 1wcz_A 33 TFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVV 112 (268)
T ss_dssp EEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCHHHHS
T ss_pred CEEEEEEEEECCEEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCccccccccccc
Confidence 4689999999999999999997543 3777653 2344455677777888999999998752 33457
Q ss_pred eeeEcCCC--CCCCCeEEEEEeCCCCCc--eeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEE
Q 007213 213 LPVEFGEL--PALQDAVTVVGYPIGGDT--ISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVG 288 (612)
Q Consensus 213 ~pl~l~~~--~~~G~~V~aiG~p~g~~~--~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIG 288 (612)
.++.|... ...|+.++++||+.+... .....|+|+.... .+++.++.+|.|+|||||++.+|+|||
T Consensus 113 ~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~----------~~i~~~~~~c~GdSGGPLv~~~g~lvG 182 (268)
T 1wcz_A 113 KPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLKG----------EAMQYDLSTTGGNSGSPVFNEKNEVIG 182 (268)
T ss_dssp CCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEET----------TEEEESBCCCTTCTTCEEECTTSCEEE
T ss_pred ceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeCC----------CeEEEecccCCCCccCeEEccCCEEEE
Confidence 88888753 356999999999976432 2445677765421 257888999999999999998899999
Q ss_pred EEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 289 IAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 289 I~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
|++.+... ..+.++++. ..++.+++++.+
T Consensus 183 IvS~G~~~--~~~~~~~~~-~~~~~wI~~~i~ 211 (268)
T 1wcz_A 183 IHWGGVPN--EFNGAVFIN-ENVRNFLKQNIE 211 (268)
T ss_dssp EEEEEETT--TEEEEEECC-HHHHHHHHHHCT
T ss_pred EEeCCccC--CcceeEEcC-HHHHHHHHHHHH
Confidence 99986542 234566664 666777776543
No 25
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.74 E-value=1.3e-18 Score=175.18 Aligned_cols=147 Identities=22% Similarity=0.273 Sum_probs=105.5
Q ss_pred cceEEEEEEEeCCEEEecccccCCCC----eEEEEEcC--C---------CcEEEEEEEEecc---CCCeEEEEecccc-
Q 007213 147 YSSSSSGFAIGGRRVLTNAHSVEHYT----QVKLKKRG--S---------DTKYLATVLAIGT---ECDIAMLTVEDDE- 207 (612)
Q Consensus 147 ~~~~GSGfiI~~g~ILT~aHvV~~~~----~i~V~~~~--~---------g~~~~a~vv~~d~---~~DLAlLkv~~~~- 207 (612)
..+.|+||+|+++||||||||+.+.. .+.+.... . +..+.++.+..++ .+|||||+++...
T Consensus 46 ~~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~~~~ 125 (246)
T 1qtf_A 46 GSTLATGVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEK 125 (246)
T ss_dssp TTEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECCCTT
T ss_pred CCceEEEEEEECCEEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeCCcc
Confidence 34689999999999999999997643 36665531 0 1468889988888 9999999998763
Q ss_pred ---ccCCeeeeEcCCC--CCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecC
Q 007213 208 ---FWEGVLPVEFGEL--PALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFND 282 (612)
Q Consensus 208 ---~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~ 282 (612)
+...++++.|++. ...|+.++++|||.+..........+.... .++.++.+|+|+|||||+|.
T Consensus 126 ~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~~~------------~~~~~~~~~~GdSGGPlv~~ 193 (246)
T 1qtf_A 126 GESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEMFN------------DSQYFGYTEVGNSGSGIFNL 193 (246)
T ss_dssp SCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEESS------------SSBEESCCCGGGTTCEEECT
T ss_pred ccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeeecC------------cEEEeCCCCCCCchhheECC
Confidence 2234788888753 356999999999987553111111111110 12345678999999999998
Q ss_pred CCeEEEEEecccCCCccceeecccChhhHH
Q 007213 283 KGKCVGIAFQSLKHEDVENIGYVIPTPVIM 312 (612)
Q Consensus 283 ~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~ 312 (612)
+|+||||++.+. .++++|++.+.
T Consensus 194 ~g~lvGI~s~g~-------~~~~ipi~~~~ 216 (246)
T 1qtf_A 194 KGELIGIHSGKG-------GQHNLPIGVFF 216 (246)
T ss_dssp TCCEEEEEEEEE-------TTTTEEEEEET
T ss_pred CCEEEEEEeccc-------cCccccchhhh
Confidence 999999999853 25778876543
No 26
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.74 E-value=5.5e-18 Score=166.67 Aligned_cols=152 Identities=12% Similarity=0.097 Sum_probs=120.9
Q ss_pred CCccEEEEecCCCcccC-CCCCC-CEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPS-DIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNIT 429 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~G-DiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~ 429 (612)
..|++|.+|.++|||++ ||++| |+|++|||++|.+|.++. ..+.....|++++|+|+|+++..+.+++
T Consensus 15 ~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~----------~~~~~~~~g~~v~l~v~R~~~~~~~~v~ 84 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTL----------KDLLKANVEKPVKMLIYSSKTLELRETS 84 (209)
T ss_dssp SEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHH----------HHHHHHTTTSCEEEEEEETTTCCEEEEE
T ss_pred CCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHH----------HHHHhcCCCCEEEEEEEecCCceEEEEE
Confidence 56999999999999999 99999 999999999999999853 4444556789999999997655555555
Q ss_pred eccCccccCCCCCCCCCCceeeccEEEeecCchhhhhhHHhhccHHHHHHhCCcccccccccchhhhhhhccCCcccccc
Q 007213 430 LATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLWCLRSPLCLNCF 509 (612)
Q Consensus 430 l~~~~~~~~~~~~~~~p~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (612)
+..... . ....+.|+.+..++ +...
T Consensus 85 l~p~~~------~----~~~~~lGi~~~~~~-------------~~~~-------------------------------- 109 (209)
T 3rle_A 85 VTPSNL------W----GGQGLLGVSIRFCS-------------FDGA-------------------------------- 109 (209)
T ss_dssp ECCCSS------S----SSSSSSCEEEEEEE-------------CTTG--------------------------------
T ss_pred Eccccc------c----cccCccceEEeecC-------------hhHc--------------------------------
Confidence 532111 0 01125678777665 1100
Q ss_pred chhhhhcccCCCCceEEEeeecccccccccccc-cceeEeeCCeecCCHHHHHHHHHhCCCCeEEEEEeCC
Q 007213 510 NKVFLLSLSLTFSFPWFCKVLVADINIGYEEIV-NTQVLAFNGNPVKNLKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 510 ~~~~~~~~~~~~~~v~v~~v~~~~~~~~~g~~~-gd~I~~vng~~v~~~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
...+++|.+|.++++|..+|+++ ||+|++|||+ |.++++|.++|++++++.+.|++.|+
T Consensus 110 ----------~~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~~~l~~~~g~~v~l~v~r~ 169 (209)
T 3rle_A 110 ----------NENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLFSLIETHEAKPLKLYVYNT 169 (209)
T ss_dssp ----------GGSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHHHHHHHTTTSCEEEEEEET
T ss_pred ----------cccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHHHHHHhCCCCeEEEEEEEC
Confidence 03579999999999999999999 9999999998 99999999999998888999999775
No 27
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.70 E-value=3.1e-16 Score=151.46 Aligned_cols=156 Identities=18% Similarity=0.200 Sum_probs=112.9
Q ss_pred eEEE-EEEEe-C--CEEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEeccccccCCeeeeE-------
Q 007213 149 SSSS-GFAIG-G--RRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVEDDEFWEGVLPVE------- 216 (612)
Q Consensus 149 ~~GS-GfiI~-~--g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DLAlLkv~~~~~~~~l~pl~------- 216 (612)
..|| ||++. + +|||||+||+.+...+. . .++....+++...+ +..|+||||++.... ..+.+.
T Consensus 12 ~~CT~Gfiv~~~g~~~ilT~~Hv~~~~~~v~--~-~~~~~~~g~~~~~~~~~~DiAlikl~~~~~--~~~~v~~~~g~~~ 86 (187)
T 1hpg_A 12 SRCSAAFNVTKGGARYFVTAGHCTNISANWS--A-SSGGSVVGVREGTSFPTNDYGIVRYTDGSS--PAGTVDLYNGSTQ 86 (187)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEEE--S-STTCCEEEEEEEEECSBSCEEEEEECSSCC--CCSEEECSSSCEE
T ss_pred CcCcceEEEEECCeeEEEECcccCCCCCeEE--e-CCCceeEEEEeCccCCCCCEEEEEeCCCCC--cCceEEecCCcee
Confidence 3566 99997 3 49999999999887755 3 34544456666555 789999999986421 112232
Q ss_pred -cC--CCCCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecc
Q 007213 217 -FG--ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQS 293 (612)
Q Consensus 217 -l~--~~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~ 293 (612)
+. ..+.+|+.|.++|++.+ .+.|+|+.+++...........++|+++.+++|+|||||++. +++|||+++.
T Consensus 87 ~i~~~~~~~~G~~v~~~G~~~g-----~t~G~v~~~~~~v~~~~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~ 160 (187)
T 1hpg_A 87 DISSAANAVVGQAIKKSGSTTK-----VTSGTVTAVNVTVNYGDGPVYNMVRTTACSAGGDSGGAHFAG-SVALGIHSGS 160 (187)
T ss_dssp ECCEECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECCCCCTTCTTCEEEET-TEEEEEEEEE
T ss_pred eeccccCCCCCCEEEEEEcCCC-----EeEEEEEEeEEEEEeCCCeEeeeEEeccccCCCCCCCeEEEC-CEEEEEEEee
Confidence 33 35678999999999865 578899988765432222334679999999999999999986 5999999985
Q ss_pred cCCCccceeecccChhhHHHHH
Q 007213 294 LKHEDVENIGYVIPTPVIMHFI 315 (612)
Q Consensus 294 ~~~~~~~~~~~aIPi~~i~~~l 315 (612)
.......+.+|++|++.++..|
T Consensus 161 ~~~~~~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 161 SGCSGTAGSAIHQPVTEALSAY 182 (187)
T ss_dssp SCCBTTBCCCEEEEHHHHHHHH
T ss_pred CCCCCCCCceEEEEHHHHHHHc
Confidence 4322334688999998877654
No 28
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=99.69 E-value=2.5e-16 Score=152.09 Aligned_cols=151 Identities=13% Similarity=0.140 Sum_probs=115.4
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC--EEEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS--KILNFN 427 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G--~~~~~~ 427 (612)
..|++|..|.++|||++ | |++||+|++|||+++.+|.+.. ........|+.+.++|.|++ ....++
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~g~~v~l~v~r~~~~~~~~~~ 103 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSA----------AVEALKEAGSIVRLYVMRRKPPAEKVME 103 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHHHHHTSCSEEEEEEEEECCCCEEEEE
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhCCCcEEEEEEecCCCccccEE
Confidence 45899999999999999 9 9999999999999999997743 22233446899999999987 445556
Q ss_pred EEeccCccccCCCCCCCCCCceeeccEEEeecCchhhhhhHHhhccHHHHHHhCCcccccccccchhhhhhhccCCcccc
Q 007213 428 ITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLWCLRSPLCLN 507 (612)
Q Consensus 428 v~l~~~~~~~~~~~~~~~p~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (612)
+.+..... -.|+.+.... . ..
T Consensus 104 v~l~~~~~---------------~lG~~~~~~~-------------~-------~~------------------------ 124 (196)
T 3gsl_A 104 IKLIKGPK---------------GLGFSIAGGV-------------G-------NQ------------------------ 124 (196)
T ss_dssp EEEEEBTT---------------BSCEEEEESB-------------T-------SC------------------------
T ss_pred EEEecCCC---------------CceEEEEccC-------------C-------Cc------------------------
Confidence 65543321 1344443222 0 00
Q ss_pred ccchhhhhcccCCCCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 508 CFNKVFLLSLSLTFSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 508 ~~~~~~~~~~~~~~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
......+++|.+|.++++|..+| +++||+|++|||++|.+ ++++.+++++. ++.+.|.+.|++.
T Consensus 125 ---------~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~~ 191 (196)
T 3gsl_A 125 ---------HIPGDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT-YDVVYLKVAKPSN 191 (196)
T ss_dssp ---------SBTTBCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHSC-CEEEEEEEEEESC
T ss_pred ---------CCCCCCCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHcC-CCeEEEEEeCCCC
Confidence 00013579999999999999999 99999999999999999 99999999864 6889999988764
No 29
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.68 E-value=9.5e-16 Score=148.16 Aligned_cols=154 Identities=14% Similarity=0.044 Sum_probs=113.3
Q ss_pred EEEEEEEe--CC--EEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEeccccc-cCCe------eeeEc
Q 007213 150 SSSGFAIG--GR--RVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVEDDEF-WEGV------LPVEF 217 (612)
Q Consensus 150 ~GSGfiI~--~g--~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DLAlLkv~~~~~-~~~l------~pl~l 217 (612)
-.+||++. +| |||||+||+.+...+ .+. | +.|+++..| +.+|+||||++.... ...+ .++.+
T Consensus 15 CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v--~~~-d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~~~~l 88 (188)
T 2oua_A 15 CSVGFAATNASGQPGFVTAGHCGSVGTQV--SIG-N---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGYATV 88 (188)
T ss_dssp EECCEEEECTTCCEEEEECGGGCCTTCEE--EET-T---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCSEEEC
T ss_pred EecCEEEEeCCCCEEEEECcccCCCCCEE--Eec-C---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcceEec
Confidence 34699995 77 999999999876654 342 4 889999999 999999999986531 1111 11345
Q ss_pred CC--CCCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccC
Q 007213 218 GE--LPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLK 295 (612)
Q Consensus 218 ~~--~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~ 295 (612)
.. .+.+|+.|..+|++.+ .+.|+|+.+++...........+++++..+.+|+|||||++ +|++|||+++...
T Consensus 89 ~~~~~~~vG~~v~~~G~~tG-----~t~G~v~~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~ 162 (188)
T 2oua_A 89 SGSSTAPIGSQVCRSGSTTG-----WYCGTIQARNQTVSYPQGTVHSLTRTSVCAEPGDSGGSFIS-GTQAQGVTSGGSG 162 (188)
T ss_dssp CBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEE
T ss_pred cCccCCCCCCeEEEEEcCCC-----eEEEEEEEEeeEEEeCCCcEeeeEeeeeecCCCCccceEEE-CCEEEEEEeccCC
Confidence 53 4577999999999976 46799998876543222223357888988999999999995 7999999998542
Q ss_pred CCccceeecccChhhHHHHH
Q 007213 296 HEDVENIGYVIPTPVIMHFI 315 (612)
Q Consensus 296 ~~~~~~~~~aIPi~~i~~~l 315 (612)
.....+.+|++|++.+++.+
T Consensus 163 ~~~~~~~~~~~pi~~~l~~~ 182 (188)
T 2oua_A 163 NCRTGGTTFYQEVNPMLNSW 182 (188)
T ss_dssp ETTTEEEEEEEESHHHHHHT
T ss_pred CCCCCCceEEEEHHHHHHHc
Confidence 22345679999998877543
No 30
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.67 E-value=4.7e-16 Score=149.60 Aligned_cols=160 Identities=18% Similarity=0.199 Sum_probs=113.2
Q ss_pred eEEE-EEEEe---CCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEecc-c-cccCCeeeeEcCC--
Q 007213 149 SSSS-GFAIG---GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVED-D-EFWEGVLPVEFGE-- 219 (612)
Q Consensus 149 ~~GS-GfiI~---~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DLAlLkv~~-~-~~~~~l~pl~l~~-- 219 (612)
+.|| ||++. ++|||||+||+.+...+.+.. .++.. .+++...+ +.+||||||++. . .+...++++.+..
T Consensus 12 ~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~-~~~~~-~g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~ 89 (185)
T 2qa9_E 12 GRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANS-ARTTV-LGTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAA 89 (185)
T ss_dssp CEEECCEEEEETTEEEEEECHHHHTTCSEEESST-TSCSE-EEEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEEC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCcEEecC-CCceE-eEEEeccccCCCCEEEEEecCCCccccCccceeeeCCcc
Confidence 4687 99996 369999999999988877654 23333 35566677 889999999987 3 2233456777753
Q ss_pred CCCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccC-CceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCCc
Q 007213 220 LPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVH-GSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHED 298 (612)
Q Consensus 220 ~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~-~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~ 298 (612)
.+..|+.+.++||+.+ .+.|.++.++...... .......++.+..+++|||||||++. +++|||+++......
T Consensus 90 ~~~~g~~v~~~Gw~~~-----~~~g~l~~~~~~v~~~~~~~~~~~~~~~~cac~GDSGGPlv~~-~~~vGI~s~g~~~~~ 163 (185)
T 2qa9_E 90 NATVGMAVTRRGSTTG-----THSGSVTALNATVNYGGGDVVYGMIRTNVCAEPGDSGGPLYSG-TRAIGLTSGGSGNCS 163 (185)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECSTTCEEEEEEEESCCCCTTCTTCEEEET-TEEEEEEEEEEEETT
T ss_pred cCCCCCEEEEecCCCc-----eeEeEEEEEEEEEEcCCCCEEeceEEecccCCCCCccceEEEC-CEEEEEEEecCCCCC
Confidence 4567999999999753 3566777665432111 11122357788888999999999986 499999998543222
Q ss_pred cceeecccChhhHHHHHH
Q 007213 299 VENIGYVIPTPVIMHFIQ 316 (612)
Q Consensus 299 ~~~~~~aIPi~~i~~~l~ 316 (612)
....+++.|++.++.+++
T Consensus 164 ~~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 164 SGGTTFFQPVTEALSAYG 181 (185)
T ss_dssp TEEEEEEEEHHHHHHHHT
T ss_pred CCCcEEEEEHHHHHHhhC
Confidence 346788999988877763
No 31
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.66 E-value=1.6e-16 Score=154.35 Aligned_cols=148 Identities=11% Similarity=0.201 Sum_probs=115.3
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEE---
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL--- 424 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~--- 424 (612)
..|++|..|.++|||++ | |++||+|++|||+++. +|.++ ..++.....|+++.|+|.|+|+..
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~~~~~~~~ 104 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEA----------NQLLRDSSITSKVTLEIEFDVAESVIP 104 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHH----------HHHHHTCCSSSEEEEEEEECSCSCCBC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhCCCCCeEEEEEEecCCCCCCC
Confidence 34789999999999999 9 9999999999999999 45653 366766666899999999998532
Q ss_pred ---EEEEEeccCccccCCCCCCCCCCceeeccEEEeecCchhhhhhHHhhccHHHHHHhCCcccccccccchhhhhhhcc
Q 007213 425 ---NFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLWCLR 501 (612)
Q Consensus 425 ---~~~v~l~~~~~~~~~~~~~~~p~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (612)
..++.+... . ....||.+.... ..
T Consensus 105 ~~~~~~v~l~~~----~----------~~~lG~~~~~~~-------------~~-------------------------- 131 (196)
T 1p1d_A 105 SSGTFHVKLPKK----H----------SVELGITISSPS-------------SR-------------------------- 131 (196)
T ss_dssp CSSCEEEEECCC----S----------SCCCCCEEECSC-------------SS--------------------------
T ss_pred CCCcEEEEecCC----C----------CCCcCEEEECCC-------------CC--------------------------
Confidence 122222210 0 002356555443 10
Q ss_pred CCccccccchhhhhcccCCCCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeC
Q 007213 502 SPLCLNCFNKVFLLSLSLTFSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEY 578 (612)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r 578 (612)
....+++|.+|.++++|..+| +++||+|++|||++|.+ +++|.++|+++ ++.+.|++.|
T Consensus 132 -----------------~~~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R 193 (196)
T 1p1d_A 132 -----------------KPGDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC-EDLVKLKIRK 193 (196)
T ss_dssp -----------------STTCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC-TTCEEEEEEC
T ss_pred -----------------CCCCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEe
Confidence 003468999999999999999 99999999999999999 99999999987 8899999998
Q ss_pred Ce
Q 007213 579 DQ 580 (612)
Q Consensus 579 ~~ 580 (612)
++
T Consensus 194 ~~ 195 (196)
T 1p1d_A 194 DE 195 (196)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 32
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=99.65 E-value=1.2e-15 Score=148.45 Aligned_cols=151 Identities=15% Similarity=0.102 Sum_probs=114.6
Q ss_pred CCccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE------
Q 007213 352 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI------ 423 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~------ 423 (612)
..|++|..|.++|||++ ||++||+|++|||+++.+|.... +..++. ..|+++.|+|.|+++.
T Consensus 32 ~~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~~~~~~g~ 101 (200)
T 2qt5_A 32 DGKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDE--------IISLLK--NVGERVVLEVEYELPPVSIQGS 101 (200)
T ss_dssp SSCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHH--------HHHHHH--TCCSEEEEEEEEECCCCCCCCS
T ss_pred CCCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCeEEEEEeccCCCcccCCC
Confidence 45899999999999986 89999999999999999984311 223332 3588999999997732
Q ss_pred ----EEEEEEeccCccccCCCCCCCCCCceeeccEEEeecCchhhhhhHHhhccHHHHHHhCCcccccccccchhhhhhh
Q 007213 424 ----LNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLWC 499 (612)
Q Consensus 424 ----~~~~v~l~~~~~~~~~~~~~~~p~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 499 (612)
.++++++... . . ..|+.+.... . .
T Consensus 102 ~~~~~~~~v~l~~~-----~-------~---~lG~~l~~g~-------------~---------~--------------- 129 (200)
T 2qt5_A 102 SVMFRTVEVTLHKE-----G-------N---TFGFVIRGGA-------------H---------D--------------- 129 (200)
T ss_dssp SEEEEEEEEEEECB-----T-------T---BCSEEEEEEC-------------C---------S---------------
T ss_pred ccceeEEEEEEecC-----C-------C---CeEEEEECCC-------------C---------C---------------
Confidence 5555555321 0 0 1355554322 0 0
Q ss_pred ccCCccccccchhhhhcccCCCCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEE
Q 007213 500 LRSPLCLNCFNKVFLLSLSLTFSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDL 576 (612)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~ 576 (612)
......+++|.+|.++++|..+| ++.||+|++|||++|. +++++.++|++ .++.+.|++
T Consensus 130 -----------------~~~~~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~~~v~l~v 191 (200)
T 2qt5_A 130 -----------------DRNKSRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEATLLI 191 (200)
T ss_dssp -----------------STTTCEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TCSEEEEEE
T ss_pred -----------------CccCCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEE
Confidence 00003568999999999999999 9999999999999999 99999999998 788999999
Q ss_pred eCCeEE
Q 007213 577 EYDQVV 582 (612)
Q Consensus 577 ~r~~~~ 582 (612)
.|+++.
T Consensus 192 ~R~~~~ 197 (200)
T 2qt5_A 192 EYDVSV 197 (200)
T ss_dssp EEEEEC
T ss_pred EECCcc
Confidence 998764
No 33
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.64 E-value=2.7e-15 Score=145.03 Aligned_cols=151 Identities=17% Similarity=0.190 Sum_probs=109.9
Q ss_pred EEE-EEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEeccccc-cCCee-----eeEcCC--
Q 007213 150 SSS-GFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVEDDEF-WEGVL-----PVEFGE-- 219 (612)
Q Consensus 150 ~GS-GfiI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DLAlLkv~~~~~-~~~l~-----pl~l~~-- 219 (612)
.|| ||++++ +||||+||+.+...+. . .+ ++++..| +.+||||||++.... ...+. ++.+..
T Consensus 16 ~CT~Gf~~~~-~ilTa~Hc~~~~~~v~--~-~d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~ 86 (189)
T 2ea3_A 16 RCSIGFAVNG-GFITAGHCGRTGATTA--N-PT-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHT 86 (189)
T ss_dssp EEECCEEETT-EEEECGGGCCTTCEEE--T-TT-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCC
T ss_pred CCccCEEccC-eEEEchhcCCCCCEEE--e-CC-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCc
Confidence 454 888876 9999999999887653 3 23 7888988 999999999986531 11122 345654
Q ss_pred CCCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCCcc
Q 007213 220 LPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDV 299 (612)
Q Consensus 220 ~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~ 299 (612)
.+.+|+.|..+|++.+ .+.|+|+.+++...........+++++..+.+|+|||||++ +|++|||+++.......
T Consensus 87 ~~~vG~~v~~~G~~tG-----~t~G~Vs~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c~~ 160 (189)
T 2ea3_A 87 AAPVGSAVCRSGSTTG-----WHCGTITALNSSVTYPEGTVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNCRT 160 (189)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEETTT
T ss_pred CCCCCCEEEEEEeCCc-----cEEEEEEecceEEEeCCccCcceEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCCCC
Confidence 4577999999999866 46788888876542222222357888999999999999996 79999999975421133
Q ss_pred ceeecccChhhHHHHH
Q 007213 300 ENIGYVIPTPVIMHFI 315 (612)
Q Consensus 300 ~~~~~aIPi~~i~~~l 315 (612)
.+.+|++|++.++..+
T Consensus 161 ~~~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 161 GGTTFFQPVNPILQAY 176 (189)
T ss_dssp EEEEEEEEHHHHHHHH
T ss_pred CCcEEEEEHHHHHHHC
Confidence 5689999988776554
No 34
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=99.60 E-value=4.8e-15 Score=144.69 Aligned_cols=143 Identities=17% Similarity=0.168 Sum_probs=105.1
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCE-EEEEEEECCEEE--EEE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDS-AAVKVLRDSKIL--NFN 427 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~-v~l~V~R~G~~~--~~~ 427 (612)
.|++|..|.++|||++ | ||+||+|++|||++|.+|..-.. .+..++ ...++. +.|+|.|+++.. +++
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~------~~~~~~--~~~~~~~v~l~v~R~~~~~~~~~~ 116 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTL------KVHQLF--HTTYEKAVTLTVFRADPPELEKFN 116 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHH------HHHHHH--HSCCSSEEEEEEECCSSCCEEEEE
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHH------HHHHHH--HhcCCCceEEEEEecccCCCcEEE
Confidence 4899999999999999 8 99999999999999999432110 011222 234555 999999988654 344
Q ss_pred EEeccCccccCCCCCCCCCCceeeccEEEeecCchhhhhhHHhhccHHHHHHhCCcccccccccchhhhhhhccCCcccc
Q 007213 428 ITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLWCLRSPLCLN 507 (612)
Q Consensus 428 v~l~~~~~~~~~~~~~~~p~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (612)
+.+.... . . -.||.+...
T Consensus 117 v~l~~~~----~--~--------~lG~~~~~~------------------------------------------------ 134 (206)
T 3r0h_A 117 VDLMKKA----G--K--------ELGLSLSPN------------------------------------------------ 134 (206)
T ss_dssp EEEECCT----T--C--------CCCEEEEEC------------------------------------------------
T ss_pred EEEecCC----C--C--------ccCeEEEcC------------------------------------------------
Confidence 4433210 0 0 124433311
Q ss_pred ccchhhhhcccCCCCceEEEeeeccccccccc-ccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCC
Q 007213 508 CFNKVFLLSLSLTFSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 508 ~~~~~~~~~~~~~~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|.++ .++.+++++ .++.+.|.+.|.
T Consensus 135 -------------~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~-~~~~v~L~V~R~ 195 (206)
T 3r0h_A 135 -------------EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG-ANGKVSMEVTRP 195 (206)
T ss_dssp -------------SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEEEE
T ss_pred -------------CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeC
Confidence 3469999999999999999 999999999999999965 888999986 457888888774
No 35
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.59 E-value=9.8e-15 Score=140.73 Aligned_cols=153 Identities=18% Similarity=0.157 Sum_probs=110.8
Q ss_pred eEEE-EEEEeC---CEEEecccccCCCCeEEEEEcCCCcEEEEEEEEec-cCCCeEEEEeccccc-cCCee-----eeEc
Q 007213 149 SSSS-GFAIGG---RRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIG-TECDIAMLTVEDDEF-WEGVL-----PVEF 217 (612)
Q Consensus 149 ~~GS-GfiI~~---g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d-~~~DLAlLkv~~~~~-~~~l~-----pl~l 217 (612)
..|| ||++.+ +|||||+||+.++..+.+ +.++++..| +..|+||||++.... ...+. ++.+
T Consensus 14 ~~CT~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~--------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~~~i 85 (186)
T 2pfe_A 14 YRCSIGFSVRQGSQTGFATAGHCGSTGTRVSS--------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTV 85 (186)
T ss_dssp EEEECCEEEEETTEEEEEECGGGCCTTCEEBT--------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCEEEC
T ss_pred CcEEeeEEEEcCCeeEEEEChhhCCCCCEEEE--------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCceEec
Confidence 3455 999963 599999999998877664 467888887 999999999986531 11111 3344
Q ss_pred CC--CCCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccC
Q 007213 218 GE--LPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLK 295 (612)
Q Consensus 218 ~~--~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~ 295 (612)
.. .+.+|+.|..+|++.+ .+.|+|+.+++...........+++++..+.+|+|||||++ +|+++||+++...
T Consensus 86 ~~~~~~~vG~~vc~~G~~tG-----~t~G~vs~~~~tv~~~~~~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~ 159 (186)
T 2pfe_A 86 TGSQEAATGSSVCRSGATTG-----WRCGTIQSKNQTVRYAEGTVTGLTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTG 159 (186)
T ss_dssp CBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEE
T ss_pred CCCCCCCCCCeEEEEEeCCc-----eEEEEEEEEeeeEEeCCceEeceEeccEEecCCCccCeEEE-CCEEEEEEeecCC
Confidence 33 4577999999999866 56789988877632222223356788888889999999996 7899999998542
Q ss_pred CCccceeecccChhhHHHHH
Q 007213 296 HEDVENIGYVIPTPVIMHFI 315 (612)
Q Consensus 296 ~~~~~~~~~aIPi~~i~~~l 315 (612)
.....+.+|++|++.+++.+
T Consensus 160 ~c~~~~~~~~~pi~~~l~~~ 179 (186)
T 2pfe_A 160 DCRSGGITFFQPINPLLSYF 179 (186)
T ss_dssp ETTTEEEEEEEEHHHHHHHH
T ss_pred CCCCCCcEEEEEHHHHHHHC
Confidence 12344679999988776554
No 36
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.59 E-value=5.9e-15 Score=141.45 Aligned_cols=152 Identities=16% Similarity=0.180 Sum_probs=103.2
Q ss_pred eEEE-EEEEe---CCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEeccccc-cCCeeee-----EcC
Q 007213 149 SSSS-GFAIG---GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEF-WEGVLPV-----EFG 218 (612)
Q Consensus 149 ~~GS-GfiI~---~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DLAlLkv~~~~~-~~~l~pl-----~l~ 218 (612)
..|| ||+|. ++|||||+||+.+...+.+-.. + ....+.+||||||++.... ...+.++ .+.
T Consensus 12 ~~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~-~--------~~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~ 82 (181)
T 2sga_A 12 SRCSLGFNVSVNGVAHALTAGHCTNISASWSIGTR-T--------GTSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDIT 82 (181)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEETTEEE-E--------EEECSBSCEEEEEESCGGGCCCEEECSSSCEEECC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCceeecce-e--------CCcCCCCCEEEEEccCCCcccceEEecCCcceeec
Confidence 4688 99997 4699999999987665533321 1 1233678999999987432 2234443 222
Q ss_pred --CCCCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccC-CceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccC
Q 007213 219 --ELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVH-GSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLK 295 (612)
Q Consensus 219 --~~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~-~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~ 295 (612)
..+..|+.|.++|++.+ .+.|.|+..+...... ......+++++..+++|||||||++.+ ++|||+++...
T Consensus 83 ~~~~~~~G~~v~~~G~~~~-----~t~G~v~~~~~~v~~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~~ 156 (181)
T 2sga_A 83 TAGNAFVGQAVQRSGSTTG-----LRSGSVTGLNATVNYGSSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALGLTSGGSG 156 (181)
T ss_dssp EECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECGGGCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEE
T ss_pred ccccCCCCCEEEEeecCCC-----ccEEEEEEeEEEEECCCCCEEeeeEecccccCCCCCCCEEEECC-EEEEEEEeeCC
Confidence 35577999999998754 3557777665442111 111234678888889999999999865 99999998643
Q ss_pred CCccceeecccChhhHHHHH
Q 007213 296 HEDVENIGYVIPTPVIMHFI 315 (612)
Q Consensus 296 ~~~~~~~~~aIPi~~i~~~l 315 (612)
.......+++.|++.++..|
T Consensus 157 ~~~~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 157 NCRTGGTTFYQPVTEALSAY 176 (181)
T ss_dssp ETTTEEEEEEEEHHHHHHHH
T ss_pred CCcCCCceEEEEHHHHHHhc
Confidence 22234678999998877665
No 37
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.58 E-value=3.2e-15 Score=140.25 Aligned_cols=117 Identities=21% Similarity=0.201 Sum_probs=90.7
Q ss_pred cceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEeccccccCCeeeeEcCCCCCCCC
Q 007213 147 YSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQD 225 (612)
Q Consensus 147 ~~~~GSGfiI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~~~~G~ 225 (612)
..+.||||+|+ ++++||++|||.++....|++ +|..+. +.+++..|||++++.........++++|++ +.+|+
T Consensus 13 ~~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~--~G~~~~---Vgf~~~~DlA~l~v~~~~~~g~~P~l~las-p~vG~ 86 (198)
T 1mbm_A 13 SYGTGSVWTRNNEVVVLTASHVVGRANMATLKI--GDAMLT---LTFKKNGDFAEAVTTQSELPGNWPQLHFAQ-PTTGP 86 (198)
T ss_dssp SEEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE--TTEEEE---EECEEETTEEEEEECTTTSCSCCCBCCBCC-CCSEE
T ss_pred cCCccceEEECCCeEEEEeeeEEccCceEEEEE--CCEEEE---eecccCCcEEEEEeeccCCCCCCcccccCC-Ccccc
Confidence 35689999999 789999999999999999999 888887 677899999999994222123567888866 67777
Q ss_pred eEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEec
Q 007213 226 AVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQ 292 (612)
Q Consensus 226 ~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~ 292 (612)
. ....+.|.+..+.-. ..+++++ .+|||||||+|.+ +||||+++
T Consensus 87 a-----------~~~~~tG~~~~l~g~--------~g~l~~t---~PGDSGsPVl~~~-~vIGV~T~ 130 (198)
T 1mbm_A 87 A-----------SWCTATGDEEGLLSG--------EVCLAWT---TSGDSGSAVVQGD-AVVGVHTG 130 (198)
T ss_dssp E-----------EEEETTEEEEEEECS--------SCEECCC---CGGGTTCEEEETT-EEEEEEEE
T ss_pred e-----------EEeeccccEEEEecC--------CceeEcC---CCCCCCCccccCC-eEEEEEec
Confidence 2 223456666666411 1346666 8999999999998 99999998
No 38
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.56 E-value=3.1e-14 Score=134.50 Aligned_cols=144 Identities=14% Similarity=0.221 Sum_probs=105.3
Q ss_pred CCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCC-CccccCccchHHHHh
Q 007213 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGT-VPFRHGERIGFSYLV 404 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~-v~~~~~~~~~~~~~l 404 (612)
++|||+.+... ..|++|..|.++|||++ ||++||+|++|||+++.+|.+ +. ..+
T Consensus 15 ~~~lG~~~~~~--------------~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~~ 70 (166)
T 1w9e_A 15 DGKIGLRLKSI--------------DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKA----------HKV 70 (166)
T ss_dssp TSCCSEEEEEE--------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHH----------HHH
T ss_pred CCcEeEEEEeC--------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHH
Confidence 68999998865 35899999999999999 999999999999999999976 32 334
Q ss_pred hccCCCCEEEEEEEECCEEEEEEEEeccCccccCCCCCCCCCCceeeccEEEeecCchhhhhhHHhhccHHHHHHhCCcc
Q 007213 405 SQKYTGDSAAVKVLRDSKILNFNITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSS 484 (612)
Q Consensus 405 ~~~~~g~~v~l~V~R~G~~~~~~v~l~~~~~~~~~~~~~~~p~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 484 (612)
.....|+++.|+|.|+++.++++++... .. ..||.+.
T Consensus 71 ~~~~~~~~v~l~vr~~~~~~~v~l~~~~------~~----------~lG~~~~--------------------------- 107 (166)
T 1w9e_A 71 LKQAFGEKITMTIRDRPFERTITMHKDS------TG----------HVGFIFK--------------------------- 107 (166)
T ss_dssp HHHCCSSEEEEEEECCTTCEEEEEECCT------TS----------CCSEEEE---------------------------
T ss_pred HhcCCCCEEEEEEEcCCCcEEEEEecCC------CC----------cEeEEEe---------------------------
Confidence 4445778999999444477777765310 00 1132211
Q ss_pred cccccccchhhhhhhccCCccccccchhhhhcccCCCCceEEEeeecccccccccccccceeEeeCCeecCCHHHHH--H
Q 007213 485 CIQCHNCQMSSLLWCLRSPLCLNCFNKVFLLSLSLTFSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLA--N 562 (612)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~--~ 562 (612)
.+ +|..|.+++++..+|++.||+|++|||+++.++.+-. -
T Consensus 108 -------------------------------------~g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~~~v~~ 149 (166)
T 1w9e_A 108 -------------------------------------NG-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIAD 149 (166)
T ss_dssp -------------------------------------TT-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCHHHHHH
T ss_pred -------------------------------------CC-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCChHHHHH
Confidence 12 6888999999999999999999999999999885432 2
Q ss_pred HHHhCCCCeEEEEE
Q 007213 563 MVENCDDEFLKFDL 576 (612)
Q Consensus 563 ~l~~~~~~~~~l~~ 576 (612)
.+. ..++.+.+.+
T Consensus 150 ~v~-r~g~~~~l~v 162 (166)
T 1w9e_A 150 ILS-TSGTVVTITI 162 (166)
T ss_dssp HHH-HSCSEEEEEE
T ss_pred HHh-hCCCEEEEEE
Confidence 223 2345555543
No 39
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.50 E-value=4.7e-13 Score=132.65 Aligned_cols=186 Identities=17% Similarity=0.214 Sum_probs=115.7
Q ss_pred eCCCCCCcccccCC---cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc-------
Q 007213 133 TEPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT------- 194 (612)
Q Consensus 133 ~~~~~~~p~~~~~~---~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~------- 194 (612)
......+||+.... ....|+|.+|++.||||+|||+.....+.|.+... ...+..+.+..++
T Consensus 6 ~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~ 85 (228)
T 1fxy_A 6 NCKDGEVPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETY 85 (228)
T ss_dssp ECCTTSCTTEEEEECTTSCEEEEEEECSSSEEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTTTT
T ss_pred ECCCCCcCcEEEEEcCCCCeeEEEEEeeCCEEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCCCCCCCC
Confidence 33445677774321 34689999999999999999997666677776321 1233444444443
Q ss_pred CCCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCCc--------eeEEEEEEeceeeecccCCceeeeEE
Q 007213 195 ECDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGDT--------ISVTSGVVSRIEILSYVHGSTELLGL 264 (612)
Q Consensus 195 ~~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~~--------~sv~~GiIs~~~~~~~~~~~~~~~~i 264 (612)
.+||||||++.+ .+...+.|+.|... ...|+.+++.||...... ..+..-+++...|...........++
T Consensus 86 ~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~ 165 (228)
T 1fxy_A 86 DFDIAVLRLKTPITFRMNVAPASLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMF 165 (228)
T ss_dssp BTCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEE
T ss_pred cCcEEEEEECCcccCCCceeccCCCCCCCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcCCCCCCCEE
Confidence 469999999865 34556889998763 356899999998753211 12223333333333221111122345
Q ss_pred EEc-----cCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 265 QID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 265 ~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
+.. ...|.|+|||||+. +|.++||++.+.........+...-+...+.++++..
T Consensus 166 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 224 (228)
T 1fxy_A 166 CVGFLEGGKDSCQGDSGGPVVC-NGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTI 224 (228)
T ss_dssp EESCTTCSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHH
T ss_pred EeccCCCCCccccCccccceEE-CCEEEEEEEECCCCCCCCCCEEEEEhHHHHHHHHHHH
Confidence 553 35789999999996 5899999998643222223344555666666666544
No 40
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.49 E-value=1.1e-12 Score=130.33 Aligned_cols=184 Identities=16% Similarity=0.173 Sum_probs=115.2
Q ss_pred CCCCCCcccccCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc-----------
Q 007213 134 EPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT----------- 194 (612)
Q Consensus 134 ~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~----------- 194 (612)
.....+||+........|+|.+|++.||||+|||+. ..+.|.+... ...+..+-+..++
T Consensus 7 a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~ 84 (235)
T 1ton_A 7 CEKNSQPWQVAVINEYLCGGVLIDPSWVITAAHCYS--NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDT 84 (235)
T ss_dssp CCTTSCTTEEEEESSSEEEEEEEETTEEEECGGGCC--SCCEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC------
T ss_pred CCCCCcCcEEEEccCCeEEEEEecCCEEEEcHHhCC--CCcEEEeCcccccCCCCcceEEEEEEEEeCCCCccccccccc
Confidence 344567887643223689999999999999999996 3455655311 2233333333332
Q ss_pred -------CCCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccCC
Q 007213 195 -------ECDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHG 257 (612)
Q Consensus 195 -------~~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~~ 257 (612)
.+|||||+++.+ .+...+.|+.|... ...|+.+++.||..... ...+..-+++...|......
T Consensus 85 ~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 164 (235)
T 1ton_A 85 EQPVHDHSNDLMLLHLSEPADITGGVKVIDLPTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKD 164 (235)
T ss_dssp --CCCCSTTCCEEEEESSCCCCCSSCCCCCCCCSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGST
T ss_pred ccccCCCcCCEEEEEcCCccccCCcceeeeCCCCCCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcC
Confidence 359999999865 34557889999863 45689999999975321 12234445555555432222
Q ss_pred ceeeeEEEEc-----cCCCCCCCCCeEecCCCeEEEEEecccC-CCccceeecccChhhHHHHHHHHHH
Q 007213 258 STELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 258 ~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
.....+++.. ...|.|+|||||+. +|.++||++.+.. .......+...-+...+.++++..+
T Consensus 165 ~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 232 (235)
T 1ton_A 165 NVTDVMLCAGEMEGGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMK 232 (235)
T ss_dssp TGGGGEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred cCCCCeEeeccCCCCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHc
Confidence 1222345552 36789999999997 6899999997522 1111223445666666777766543
No 41
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.49 E-value=4.6e-13 Score=132.29 Aligned_cols=183 Identities=16% Similarity=0.195 Sum_probs=114.6
Q ss_pred CCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCC--CeEEEEEcC-----CCcEEEEEEEEecc-----CCCeEE
Q 007213 135 PNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRG-----SDTKYLATVLAIGT-----ECDIAM 200 (612)
Q Consensus 135 ~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~--~~i~V~~~~-----~g~~~~a~vv~~d~-----~~DLAl 200 (612)
....+||.... .....|+|++|++.||||+|||+.+. ..+.|.+.. ++..+..+-+..++ .+||||
T Consensus 8 ~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~DiAL 87 (224)
T 1pq7_A 8 SAGDFPFIVSISRNGGPWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAI 87 (224)
T ss_dssp CTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTCCEE
T ss_pred CCCCcCeEEEEEECCCeEEEEEEecCCEEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCCEEE
Confidence 34456666432 23468999999999999999999853 457777732 23455555556665 469999
Q ss_pred EEeccc-cccCCeeeeEcCC---CCCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccC-CceeeeEEEEc
Q 007213 201 LTVEDD-EFWEGVLPVEFGE---LPALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVH-GSTELLGLQID 267 (612)
Q Consensus 201 Lkv~~~-~~~~~l~pl~l~~---~~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~-~~~~~~~i~~d 267 (612)
|+++.+ .+...+.|+.|.. ....|+.+++.||..... ...+...+++...|..... ......+++..
T Consensus 88 l~L~~~~~~~~~v~picL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~ 167 (224)
T 1pq7_A 88 LKLSTSIPSGGNIGYARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAG 167 (224)
T ss_dssp EEESSCCCCBTTBCCCCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEEC
T ss_pred EEeCCCCcCCCcccceecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCCCCCCeEEee
Confidence 999865 3445688999873 235689999999865321 1123344454444432211 11122345552
Q ss_pred -----cCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHH
Q 007213 268 -----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (612)
Q Consensus 268 -----a~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~ 317 (612)
...|.|+|||||+..+|.++||++.+.........+....+...+.++++
T Consensus 168 ~~~~~~~~C~GDSGgPL~~~~g~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 222 (224)
T 1pq7_A 168 VSSGGKDSCQGDSGGPIVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDT 222 (224)
T ss_dssp CTTCCCBCCTTCTTCEEECTTCCEEEEEEECSSSSCTTCCEEEEETTTSHHHHHH
T ss_pred cCCCCCCCCcCCCCcceECcCCeEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHh
Confidence 36789999999998789999999985432211223344445555555543
No 42
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.48 E-value=9.8e-13 Score=130.97 Aligned_cols=186 Identities=19% Similarity=0.181 Sum_probs=114.9
Q ss_pred CCCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCCCeEEEEEc------CCCcEEEEEEEEecc-----------
Q 007213 134 EPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKR------GSDTKYLATVLAIGT----------- 194 (612)
Q Consensus 134 ~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~------~~g~~~~a~vv~~d~----------- 194 (612)
.....+||+... .....|+|.+|++.||||+|||+.+...+.+-.. ..++.+..+-+..++
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~ 86 (237)
T 2zch_P 7 CEKHSQPWQVLVASRGRAVCGGVLVHPQWVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRF 86 (237)
T ss_dssp CCTTSCTTEEEEESSSSEEEEEEEEETTEEEECGGGCCSSCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTSSS
T ss_pred CCCCCCCCEEEEeeCCCeEEEEEEecCCEEEEcHHhcCCCceEEEecccccCCCCCcEEEEEEEEecCCCcchhhhcccc
Confidence 344567777542 2346899999999999999999987554333221 113344444444443
Q ss_pred -------CCCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccCC
Q 007213 195 -------ECDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHG 257 (612)
Q Consensus 195 -------~~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~~ 257 (612)
.+|||||+++.+ .+...+.|+.|... ...|+.+++.||..... ...+..-+++...|......
T Consensus 87 ~~~~~~~~~DIALl~L~~~~~~~~~v~pi~Lp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 166 (237)
T 2zch_P 87 LRPGDDSSHDLMLLRLSEPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQ 166 (237)
T ss_dssp CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCSSCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSS
T ss_pred cccCCCCCcceEEEEeCCCCccCCcEeeeECCCCCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccccC
Confidence 569999999865 34556889988863 45689999999975321 11233344444444322111
Q ss_pred ceeeeEEEEc-----cCCCCCCCCCeEecCCCeEEEEEecccC-CCccceeecccChhhHHHHHHHHHH
Q 007213 258 STELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 258 ~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
.....++++. ...|.|+|||||+. ++.++||++.+.. .......+....+...++++++..+
T Consensus 167 ~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 234 (237)
T 2zch_P 167 KVTKFMLCAGRWTGGKSTCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIV 234 (237)
T ss_dssp BCCTTEEEEECTTCSCBCCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCceEEeecCCCCCCcccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 1112345553 36889999999996 5899999997542 1112233445566666777766543
No 43
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.48 E-value=8.9e-13 Score=130.37 Aligned_cols=181 Identities=19% Similarity=0.221 Sum_probs=110.0
Q ss_pred CCCCCCcccccCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc---------
Q 007213 134 EPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT--------- 194 (612)
Q Consensus 134 ~~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~--------- 194 (612)
.....+||+.... ....|+|.+|++.||||+|||+.. .+.|.+.. .++.+..+-+..++
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~ 84 (225)
T 1npm_A 7 CIPHSQPWQAALFQGERLICGGVLVGDRWVLTAAHCKKQ--KYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPED 84 (225)
T ss_dssp CCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS--SCEEEESCSBTTC--CCCEEECEEEEEECTTCCSSCTTC
T ss_pred CCCCCcCcEEEEeeCCceEEEEEEECCCEEEEhHHcCCC--CceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCccC
Confidence 3445677775432 346899999999999999999963 35555531 12334443333333
Q ss_pred -CCCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccCCceeeeE
Q 007213 195 -ECDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHGSTELLG 263 (612)
Q Consensus 195 -~~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~~~~~~~~ 263 (612)
.+|||||+++.+ .+...+.|+.|... ...|+.+++.||..... ...+..-+++...|.....+.....+
T Consensus 85 ~~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~ 164 (225)
T 1npm_A 85 HSHDIMLIRLQNSANLGDKVKPVQLANLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGM 164 (225)
T ss_dssp CTTCCEEEEESSCCCCSSSSCCCEECSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHSTTTCCTTE
T ss_pred ccccEEEEeeCCcccCCCceeceECCCCCCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhCCCCCCCE
Confidence 359999999865 34557899999863 45689999999975311 11223333443333322111112234
Q ss_pred EEEc----cCCCCCCCCCeEecCCCeEEEEEecccC-CCccceeecccChhhHHHHHHH
Q 007213 264 LQID----AAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQD 317 (612)
Q Consensus 264 i~~d----a~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aIPi~~i~~~l~~ 317 (612)
++.. ...|.|+|||||+. +|.++||++.+.. .......+...-+...+.++++
T Consensus 165 ~Ca~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~ 222 (225)
T 1npm_A 165 VCAGSSNGADTCQGDSGGPLVC-DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKK 222 (225)
T ss_dssp EEEECTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHH
T ss_pred EeecCCCCCeecCCCCCchheE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 5552 46789999999996 6899999997521 1111223444555555555554
No 44
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.48 E-value=1e-12 Score=129.77 Aligned_cols=183 Identities=15% Similarity=0.146 Sum_probs=113.5
Q ss_pred CCCCCCcccccCC-cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------CCC
Q 007213 134 EPNFSLPWQRKRQ-YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT-------ECD 197 (612)
Q Consensus 134 ~~~~~~p~~~~~~-~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~-------~~D 197 (612)
.....+||+.... ....|+|.+|++.||||+|||+.. .+.|.+.. ..+.+..+-+..++ .+|
T Consensus 7 a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~D 84 (222)
T 1hj8_A 7 CKAYSQPHQVSLNSGYHFCGGSLVNENWVVSAAHCYKS--RVEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDND 84 (222)
T ss_dssp CCTTSCTTEEEEESSSEEEEEEEEETTEEEECGGGCCS--SCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTBSC
T ss_pred CCCCCCCEEEEEEcCCcEEEeEEecCCEEEECHHhcCC--CeEEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCCCc
Confidence 3445677775432 246899999999999999999974 34555521 12334444444444 469
Q ss_pred eEEEEecccc-ccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCCceeeeEEEEc-
Q 007213 198 IAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTELLGLQID- 267 (612)
Q Consensus 198 LAlLkv~~~~-~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~~~~~~~i~~d- 267 (612)
|||||++.+. +...+.|+.|... ...|+.+++.||..... ...+..-+++...|...........+++..
T Consensus 85 IALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~ 164 (222)
T 1hj8_A 85 IMLIKLSKPATLNTYVQPVALPTSCAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGY 164 (222)
T ss_dssp CEEEEESSCCCCSSSCCCCBCCSSCCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCCTTEEEESC
T ss_pred EEEEEECCcccCCCceeccCCCCCCCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCCCCCCeEEecc
Confidence 9999998753 4456889999763 45689999999975421 112223333333333221111122345553
Q ss_pred ----cCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 268 ----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 268 ----a~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
...|.|+|||||+. +|+++||++.+.........+...-+...+.++++..
T Consensus 165 ~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~~ 219 (222)
T 1hj8_A 165 LEGGKDSCQGDSGGPVVC-NGELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTM 219 (222)
T ss_dssp TTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCccCCCCcccceEE-CCEEEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHHh
Confidence 35789999999996 6899999998653222223344555666666666544
No 45
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.48 E-value=9.7e-13 Score=129.57 Aligned_cols=184 Identities=14% Similarity=0.133 Sum_probs=115.3
Q ss_pred CCCCCCcccccC-CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------CCC
Q 007213 134 EPNFSLPWQRKR-QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT-------ECD 197 (612)
Q Consensus 134 ~~~~~~p~~~~~-~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~-------~~D 197 (612)
.....+||.... .....|+|.+|++.||||+|||+... +.|.+.. ....+..+-+..++ .+|
T Consensus 7 a~~~~~Pw~v~l~~~~~~C~GtLI~~~~VLTAAhC~~~~--~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~D 84 (223)
T 4i8h_A 7 CGANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYKSG--IQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNND 84 (223)
T ss_dssp CCTTSSTTEEEEESSSEEEEEEECSSSEEEECGGGCCSS--CEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTC
T ss_pred CCCCCCCeEEEecCCCcEEEEEEEcCCEEEecHHhCCCC--cEEEEccccccccCCCcEEEEEeEEEECcCCCCCCCcCC
Confidence 344567777543 23457999999999999999999853 4444421 12334444445554 469
Q ss_pred eEEEEeccc-cccCCeeeeEcCC-CCCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccCCceeeeEEEEc
Q 007213 198 IAMLTVEDD-EFWEGVLPVEFGE-LPALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHGSTELLGLQID 267 (612)
Q Consensus 198 LAlLkv~~~-~~~~~l~pl~l~~-~~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~~~~~~~~i~~d 267 (612)
||||+++.+ .+...+.|+.|.. ....|+.+++.||..... ...+...+++...|...........+++..
T Consensus 85 IAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~ 164 (223)
T 4i8h_A 85 IMLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAG 164 (223)
T ss_dssp CEEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEES
T ss_pred EEEEEECCcCcCCCceeceECCCCCCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCCCCCCCeEecc
Confidence 999999865 3455788999976 345689999999865322 112233333333333222222222345552
Q ss_pred -----cCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 268 -----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 268 -----a~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
...|.|+|||||+. ++.++||++.+.........+....+...+.++++..+
T Consensus 165 ~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~ 221 (223)
T 4i8h_A 165 YLEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp CTTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCCCccCCCCCCCcEEE-CCEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 46788999999996 57999999986543222234455666667777766543
No 46
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.47 E-value=1.4e-12 Score=128.83 Aligned_cols=182 Identities=14% Similarity=0.149 Sum_probs=112.8
Q ss_pred CCCCCcccccC-CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------CCCe
Q 007213 135 PNFSLPWQRKR-QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT-------ECDI 198 (612)
Q Consensus 135 ~~~~~p~~~~~-~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~-------~~DL 198 (612)
....+||+... .....|+|.+|++.||||+|||+. ..+.|.+.. +++.+..+-+..++ .+||
T Consensus 8 ~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DI 85 (223)
T 3mfj_A 8 GANTVPYQVSLNSGYHFCGGSLINSQWVVSAAHCYK--SGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDI 85 (223)
T ss_dssp CTTSSTTEEEEESSSEEEEEEEEETTEEEECGGGCC--SSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCC
T ss_pred CCCcCCEEEEEEcCCeEEEEEEecCCEEEEhHHhcC--CCcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCCCE
Confidence 34456776532 123689999999999999999995 445666632 12334444444444 4699
Q ss_pred EEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccCCceeeeEEEEc-
Q 007213 199 AMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHGSTELLGLQID- 267 (612)
Q Consensus 199 AlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~~~~~~~~i~~d- 267 (612)
||||++.+ .+...+.|+.|... ...|+.+++.||..... ...+..-+++...|...........+++..
T Consensus 86 ALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~ 165 (223)
T 3mfj_A 86 MLIKLKSAASLNSRVASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGY 165 (223)
T ss_dssp EEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESC
T ss_pred EEEEeCCCcccCCcEeeeECCCCCCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCEEEccC
Confidence 99999875 34557889999763 35689999999975421 112223333333333221111122346653
Q ss_pred ----cCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 268 ----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 268 ----a~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
...|.|+|||||+. +|+++||++.+.........+....+...++++++..
T Consensus 166 ~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i 220 (223)
T 3mfj_A 166 LEGGKDSCQGDSGGPVVC-SGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTI 220 (223)
T ss_dssp TTSSCBCCTTCTTCEEEE-TTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCCcCCCCcccceEE-CCEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 35789999999997 6899999998643222223344556666666666544
No 47
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.47 E-value=1.3e-12 Score=129.99 Aligned_cols=183 Identities=16% Similarity=0.102 Sum_probs=113.2
Q ss_pred CCCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc---------
Q 007213 134 EPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT--------- 194 (612)
Q Consensus 134 ~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~--------- 194 (612)
.....+||+... .....|+|.+|++.||||+|||+. ..+.|.+... ++.+..+-+..++
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~ 84 (237)
T 1ao5_A 7 CEKNSQPWQVAVYYQKEHICGGVLLDRNWVLTAAHCYV--DQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLML 84 (237)
T ss_dssp CCTTSCTTEEEEEETTEEEEEEEEEETTEEEECTTCCC--SSCEEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGGGC
T ss_pred CCCCCcCCEEEEeeCCCeEEEEEEeeCCEEEECHHHCC--CCCEEEecccccccCCCCcEEEEEEEEEcCCCcCcccccc
Confidence 344567777542 234689999999999999999996 3455665311 1223333333332
Q ss_pred ---------CCCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeeccc
Q 007213 195 ---------ECDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYV 255 (612)
Q Consensus 195 ---------~~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~ 255 (612)
.+|||||+++.+ .+.+.+.|+.|... ...|+.+++.||..... ...+..-+++...|....
T Consensus 85 ~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 164 (237)
T 1ao5_A 85 QTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVY 164 (237)
T ss_dssp SSCCTTCCCTTCCEEEEESSCCCCCSSSCCCCCCCSCCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHC
T ss_pred cccccccCCCCCEEEEEeCCccccCCceeCCCcCCCCCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhh
Confidence 679999999865 34456889999863 35689999999864321 112334444444443221
Q ss_pred CCceeeeEEEEc-----cCCCCCCCCCeEecCCCeEEEEEecc-cCCCccceeecccChhhHHHHHHHHH
Q 007213 256 HGSTELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 256 ~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~-~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
.......+++.. ...|.|+|||||+. +|.++||++.+ .........+....+...+.++++..
T Consensus 165 ~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 233 (237)
T 1ao5_A 165 LQKVTDVMLCAGEMGGGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTM 233 (237)
T ss_dssp SSCCCTTEEEEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHH
T ss_pred cccCCCCEEEEccCCCCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence 111122345553 36789999999997 68999999985 22211122344566666677766654
No 48
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.47 E-value=1.2e-12 Score=131.62 Aligned_cols=187 Identities=17% Similarity=0.189 Sum_probs=118.6
Q ss_pred CCCCCCcccccC---CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc-------C
Q 007213 134 EPNFSLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT-------E 195 (612)
Q Consensus 134 ~~~~~~p~~~~~---~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~-------~ 195 (612)
.....+||+... .....|+|.+|++.||||+|||+.+...+.|.+... ...+..+-+..++ .
T Consensus 7 a~~~~~Pw~v~l~~~~~~~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 86 (250)
T 1aut_C 7 TRRGDSPWQVVLLDSKKKLACGAVLIHPSWVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTD 86 (250)
T ss_dssp CCTTSCTTEEEEECTTSCEEEEEEEEETTEEEECGGGSSSCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTTCBTTTTB
T ss_pred CCCCCCCCEEEEecCCCceEEEEEEeeCCEEEEChHHcCCCCceEEEEcccccCCCCCccEEEEEEEEEECCCCCCCCCC
Confidence 344567776532 234689999999999999999998877778877421 2234444444444 3
Q ss_pred CCeEEEEeccc-cccCCeeeeEcCCC-------CCCCCeEEEEEeCCCCC------------ceeEEEEEEeceeeeccc
Q 007213 196 CDIAMLTVEDD-EFWEGVLPVEFGEL-------PALQDAVTVVGYPIGGD------------TISVTSGVVSRIEILSYV 255 (612)
Q Consensus 196 ~DLAlLkv~~~-~~~~~l~pl~l~~~-------~~~G~~V~aiG~p~g~~------------~~sv~~GiIs~~~~~~~~ 255 (612)
+|||||+++.+ .+...+.|+.|... ...|+.+++.||..... ...+..-+++...|....
T Consensus 87 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~ 166 (250)
T 1aut_C 87 NDIALLHLAQPATLSQTIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVM 166 (250)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHHHHHHC
T ss_pred CcEEEEEECCcccCCCceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHHhhHHh
Confidence 69999999875 34556889988752 24689999999974321 112334445544443322
Q ss_pred CCceeeeEEEEc-----cCCCCCCCCCeEecC-CCe--EEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 256 HGSTELLGLQID-----AAINSGNSGGPAFND-KGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 256 ~~~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G~--VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
.......+++.. ...|.|+|||||+.. +|+ ++||++.+.........+...-+...+.++++..+
T Consensus 167 ~~~~~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 239 (250)
T 1aut_C 167 SNMVSENMLCAGILGDRQDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIR 239 (250)
T ss_dssp SSCCCTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHHHHHC
T ss_pred ccCCCCCEEEeCCCCCCCCCCCCCCchheEEEECCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhh
Confidence 111122346652 357899999999964 564 99999986532222234455666667777766553
No 49
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.45 E-value=1.1e-12 Score=130.60 Aligned_cols=182 Identities=16% Similarity=0.149 Sum_probs=109.4
Q ss_pred CCCCCcccccCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc----------
Q 007213 135 PNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT---------- 194 (612)
Q Consensus 135 ~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~---------- 194 (612)
....+||..... ....|+|.+|++.||||+|||+. ..+.|.+.. .+..+..+-+..++
T Consensus 8 ~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~ 85 (237)
T 1gvz_A 8 EKHSKPWQVAVYHQGHFQCGGVLVHPQWVLTAAHCMS--DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKK 85 (237)
T ss_dssp CTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCC--SSCEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGGCS
T ss_pred CCCCCCeEEEEeeCCceEEEeEEeeCCEEEEcHHhCC--CCCeEEEeecccccCCCCceEEEeeeEecCCccCccccccc
Confidence 344567765322 34589999999999999999997 345555531 12334444444443
Q ss_pred --------CCCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCC---Cc-----eeEEEEEEeceeeecccC
Q 007213 195 --------ECDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGG---DT-----ISVTSGVVSRIEILSYVH 256 (612)
Q Consensus 195 --------~~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~---~~-----~sv~~GiIs~~~~~~~~~ 256 (612)
.+|||||+++.+ .+.+.+.|+.|... ...|+.+++.||.... .. ..+..-+++...|.....
T Consensus 86 ~~~~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~ 165 (237)
T 1gvz_A 86 YLRPYDDISHDLMLLRLAQPARITDAVKILDLPTQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYP 165 (237)
T ss_dssp SCCTTSCCTTCCEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSSCG
T ss_pred ccccccccCCceEEEEeCCCcccCCcEeeeECCCCCCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhhhh
Confidence 689999999875 34557889999763 4568999999987541 11 112223333333432211
Q ss_pred CceeeeEEEEc-----cCCCCCCCCCeEecCCCeEEEEEeccc-CCCccceeecccChhhHHHHHHHHH
Q 007213 257 GSTELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 257 ~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~-~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
......+++.. ...|.|+|||||+. +|.++||++.+. ........+....+...+.++++..
T Consensus 166 ~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 233 (237)
T 1gvz_A 166 EKMTEFVLCATHRDDSGSICLGDSGGALIC-DGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETI 233 (237)
T ss_dssp GGCCTTEEEEECSSTTCEECGGGTTCEEEE-TTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHH
T ss_pred hcCCCceEEEeeCCCCCccCCCCccCcEee-CCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHH
Confidence 11112345543 24688999999996 689999999754 1111112233455555556655543
No 50
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.45 E-value=2.2e-12 Score=127.38 Aligned_cols=183 Identities=20% Similarity=0.145 Sum_probs=113.4
Q ss_pred CCCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------CC
Q 007213 134 EPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT-------EC 196 (612)
Q Consensus 134 ~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~-------~~ 196 (612)
.....+||+... .....|+|.+|++.||||+|||+... +.|.+.. .++.+..+-+..++ .+
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~ 84 (223)
T 1lo6_A 7 CDKTSHPYQAALYTSGHLLCGGVLIHPLWVLTAAHCKKPN--LQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQ 84 (223)
T ss_dssp CCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCTT--CEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTT
T ss_pred CCCCCCCCEEEEecCCCEEEEeEEecCCEEEECccCCCCC--eEEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCCcC
Confidence 334466776532 23468999999999999999999743 4555521 12334444444443 46
Q ss_pred CeEEEEecccc-ccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC------ceeEEEEEEeceeeecccCCceeeeEEEEc-
Q 007213 197 DIAMLTVEDDE-FWEGVLPVEFGEL-PALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHGSTELLGLQID- 267 (612)
Q Consensus 197 DLAlLkv~~~~-~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~~~~~~~~~~~~i~~d- 267 (612)
|||||+++.+. +...+.|+.|... ...|+.+++.||..... ...+..-+++...|.....+.....+++..
T Consensus 85 DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~ 164 (223)
T 1lo6_A 85 DIMLLRLARPAKLSELIQPLPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGD 164 (223)
T ss_dssp CCEEEEESSCCCCBTTBCCCCBCCCTTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEEEEEC
T ss_pred eEEEEEECCcccCCCceeecccCCCCCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeEEeec
Confidence 99999998653 4456889999763 35689999999975421 112334445544443322221222345552
Q ss_pred ----cCCCCCCCCCeEecCCCeEEEEEecc-cCCCccceeecccChhhHHHHHHHHH
Q 007213 268 ----AAINSGNSGGPAFNDKGKCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 268 ----a~i~~G~SGGPlvn~~G~VIGI~~~~-~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
...|.|+|||||+. +|.++||++.+ .........+...-+...+.++++..
T Consensus 165 ~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 220 (223)
T 1lo6_A 165 EKYGKDSCQGDSGGPLVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTI 220 (223)
T ss_dssp TTTCCBCCTTTTTCEEEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCeeccccCCCcEEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 36789999999997 58999999975 22211222344555666666666654
No 51
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.45 E-value=2.4e-12 Score=128.40 Aligned_cols=190 Identities=17% Similarity=0.093 Sum_probs=115.1
Q ss_pred EeeeeCCCCCCcccccCC--cceEEEEEEEeCCEEEecccccCC---CCeEEEEEcCC--------CcEEEEEEEEecc-
Q 007213 129 FCVHTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEH---YTQVKLKKRGS--------DTKYLATVLAIGT- 194 (612)
Q Consensus 129 ~~~~~~~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~---~~~i~V~~~~~--------g~~~~a~vv~~d~- 194 (612)
..........+||..... ....|+|.+|++.||||+|||+.. ...+.|.+... .+.+..+-+..++
T Consensus 4 vgG~~a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~ 83 (240)
T 1mza_A 4 IGGKEVSPHSRPFMASIQYGGHHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSR 83 (240)
T ss_dssp CCCEECCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEECCC
T ss_pred ECCEECCCCCCCeEEEEeeCCceEEEEEEecCCEEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeCCC
Confidence 334444555677775432 346899999999999999999864 45677777321 1334444444443
Q ss_pred ------CCCeEEEEeccc-cccCCeeeeEcCC--CCCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeee--ccc
Q 007213 195 ------ECDIAMLTVEDD-EFWEGVLPVEFGE--LPALQDAVTVVGYPIGGD--------TISVTSGVVSRIEIL--SYV 255 (612)
Q Consensus 195 ------~~DLAlLkv~~~-~~~~~l~pl~l~~--~~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~--~~~ 255 (612)
.+|||||+++.+ .+...+.|+.|.. ....|+.+++.||..... ...+..-+++...|. ...
T Consensus 84 y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~ 163 (240)
T 1mza_A 84 VTSDPQSNDIMLVKLQTAAKLNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYY 163 (240)
T ss_dssp SSCSSSSSCCEEEEESSCCCCBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTTTT
T ss_pred ccCCCCCceEEEEEeCCCcccCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCccee
Confidence 479999999865 3445688998875 234589999999864321 112333344444443 111
Q ss_pred CC--ceeeeEEEEc-----cCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhh-HHHHHHHHH
Q 007213 256 HG--STELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPV-IMHFIQDYE 319 (612)
Q Consensus 256 ~~--~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~-i~~~l~~l~ 319 (612)
.+ .....+++.. ...|.|+|||||+. +|.++||++.+.........+...-+.. .+.++++..
T Consensus 164 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGGPL~~-~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~y~~WI~~~~ 234 (240)
T 1mza_A 164 NGDPFITKDMVCAGDAKGQKDSCKGDAGGPLIC-KGVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNL 234 (240)
T ss_dssp TTTTCCCTTEEEEECTTSCCCCCTTCTTCEEEE-TTEEEEEECSSCCSSCTTCCEEEEECCHHHHHHHHHHT
T ss_pred CCCCcCCCCeEeecCCCCCCccCCCCCCCeeEE-CCEEEEEEEECCCCCCCCCCcEEEeChHHHHHHHHHhc
Confidence 11 1112345552 36789999999997 6899999998543221122233334444 555665543
No 52
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.45 E-value=2.2e-12 Score=127.37 Aligned_cols=183 Identities=16% Similarity=0.157 Sum_probs=112.5
Q ss_pred CCCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC---------CCcEEEEEEEEecc-------C
Q 007213 134 EPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG---------SDTKYLATVLAIGT-------E 195 (612)
Q Consensus 134 ~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~---------~g~~~~a~vv~~d~-------~ 195 (612)
.....+||+... .....|+|.+|++.||||+|||+.+. +.|.+.. +.+.+..+-+..++ .
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~ 84 (223)
T 2bdg_A 7 CSPHSQPWQAALVMENELFCSGVLVHPQWVLSAAHCFQNS--YTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLA 84 (223)
T ss_dssp CCTTSSTTEEEEECSSCEEEEEEEEETTEEEECGGGCCSS--EEEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSSTTC
T ss_pred CCCCCCCcEEEEeeCCCEEEEEEEecCCEEEEhHHhCCCC--eEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCCCc
Confidence 344567777532 23468999999999999999999753 4455421 12334444444444 4
Q ss_pred CCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCCc------eeEEEEEEeceeeecccCCceeeeEEEEc
Q 007213 196 CDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGDT------ISVTSGVVSRIEILSYVHGSTELLGLQID 267 (612)
Q Consensus 196 ~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~~------~sv~~GiIs~~~~~~~~~~~~~~~~i~~d 267 (612)
+|||||+++.+ .+...+.|+.|... ...|+.+++.||...... ..+..-+++...|...........+++..
T Consensus 85 ~DIALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~ 164 (223)
T 2bdg_A 85 NDLMLIKLDESVSESDTIRSISIASQCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAG 164 (223)
T ss_dssp SCCEEEEESSCCCCCSSCCCCCBCSSCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEEC
T ss_pred CcEEEEEECCcccCCCceecccCCCCCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCCCCCCCeEecc
Confidence 69999999875 34456888888763 456899999999754221 12223333333333221111122346653
Q ss_pred -----cCCCCCCCCCeEecCCCeEEEEEecccC-CCccceeecccChhhHHHHHHHHH
Q 007213 268 -----AAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 268 -----a~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
...|.|+|||||+. +|.++||++.+.. .......+...-+...+.++++..
T Consensus 165 ~~~~~~~~C~GDsGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 221 (223)
T 2bdg_A 165 GGQDQKDSCNGDSGGPLIC-NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTV 221 (223)
T ss_dssp CSTTCCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHH
T ss_pred CCCCCCCcCCCCCCchheE-ccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHh
Confidence 35789999999996 5899999997542 111123344556666666665543
No 53
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.44 E-value=2e-12 Score=127.84 Aligned_cols=182 Identities=18% Similarity=0.176 Sum_probs=112.1
Q ss_pred CCCCCcccccCC-cce-EEEEEEEeCCEEEecccccCCCCeEEEEEcCC------CcEEEEEEEEecc-------CCCeE
Q 007213 135 PNFSLPWQRKRQ-YSS-SSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS------DTKYLATVLAIGT-------ECDIA 199 (612)
Q Consensus 135 ~~~~~p~~~~~~-~~~-~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~------g~~~~a~vv~~d~-------~~DLA 199 (612)
....+||..... ... .|+|.+|++.||||+|||+. ..+.|.+... .+.+..+-+..++ .+|||
T Consensus 8 ~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIA 85 (224)
T 2qxi_A 8 ARGSHPWQVALLSGNQLHCGGVLVNERWVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLM 85 (224)
T ss_dssp CTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTCCE
T ss_pred CCCCCCCEEEEeeCCCeEEEEEEecCCEEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCcEE
Confidence 344567765431 123 79999999999999999995 5677776321 2334444444443 36999
Q ss_pred EEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccCCceeeeEEEEc--
Q 007213 200 MLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHGSTELLGLQID-- 267 (612)
Q Consensus 200 lLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~~~~~~~~i~~d-- 267 (612)
||+++.+ .+...+.|+.|... ...|+.+++.||..... ...+..-+++..+|...........+++..
T Consensus 86 Ll~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 165 (224)
T 2qxi_A 86 LVKLNSQARLSSMVKKVRLPSRCEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIP 165 (224)
T ss_dssp EEECSSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECT
T ss_pred EEEeCCCCcCCCceeeEECCCCCCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcCcCCCCeEEecCC
Confidence 9999865 34557889999763 35689999999975421 112334445544443211111111345543
Q ss_pred ---cCCCCCCCCCeEecCCCeEEEEEecc-cCCCccceeecccChhhHHHHHHHHH
Q 007213 268 ---AAINSGNSGGPAFNDKGKCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 268 ---a~i~~G~SGGPlvn~~G~VIGI~~~~-~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
...|.|+|||||+. +|.++||++.+ .........+...-+...+.++++..
T Consensus 166 ~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 220 (224)
T 2qxi_A 166 DSKKNACNGDSGGPLVC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTM 220 (224)
T ss_dssp TCCCBCCTTCTTCEEEE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHH
T ss_pred CCCCccCCCCccccEEE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 35789999999997 68999999975 22211122344455566666666544
No 54
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.43 E-value=2.4e-12 Score=127.40 Aligned_cols=183 Identities=14% Similarity=0.148 Sum_probs=110.7
Q ss_pred CCCCCCcccccCC---cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC---------CCcEEEEEEEEecc-------
Q 007213 134 EPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG---------SDTKYLATVLAIGT------- 194 (612)
Q Consensus 134 ~~~~~~p~~~~~~---~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~---------~g~~~~a~vv~~d~------- 194 (612)
.....+||..... ....|+|.+|++.||||+|||+... +.|.+.. ..+.+...-+..++
T Consensus 7 a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~ 84 (227)
T 2psx_A 7 CDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCRKKV--FRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGH 84 (227)
T ss_dssp CCTTSCTTEEEEEETTTEEEEEEEEEETTEEEECGGGCCSS--CEEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSSSC
T ss_pred CCCCCCCCEEEEEecCCCceEEEEEEcCCEEEEhHHcCCCC--cEEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCCCC
Confidence 3445677775422 3468999999999999999999753 4455421 12234444344443
Q ss_pred CCCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCCc--------eeEEEEEEeceeeecccCCceeeeEE
Q 007213 195 ECDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGDT--------ISVTSGVVSRIEILSYVHGSTELLGL 264 (612)
Q Consensus 195 ~~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~~--------~sv~~GiIs~~~~~~~~~~~~~~~~i 264 (612)
.+||||||++.+ .+...+.|+.|... ...|+.+++.||...... ..+..-+++...|...........++
T Consensus 85 ~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~ 164 (227)
T 2psx_A 85 SNDLMLIKLNRRIRPTKDVRPINVSSHCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQIDDTMF 164 (227)
T ss_dssp TTCCEEEEESSCCCCCSSSCCCCBCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEE
T ss_pred CCCEEEEEeCCCCCCCCceeeeECCCCCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcCCCCCCCEE
Confidence 469999999865 34456889988753 456899999999753211 11222333333333221111112345
Q ss_pred EEc----cCCCCCCCCCeEecCCCeEEEEEecc-cCCCccceeecccChhhHHHHHHHHH
Q 007213 265 QID----AAINSGNSGGPAFNDKGKCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 265 ~~d----a~i~~G~SGGPlvn~~G~VIGI~~~~-~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
+.. ...|.|+|||||+. +|.++||++.+ .........+....+...+.++++..
T Consensus 165 Ca~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~ 223 (227)
T 2psx_A 165 CAGDKAGRDSCQGDSGGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETI 223 (227)
T ss_dssp EECCSTTCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHH
T ss_pred cccCCCCCccCCCCCCcceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHH
Confidence 553 35789999999996 57999999975 22211122344555666666666544
No 55
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.43 E-value=3.3e-12 Score=126.22 Aligned_cols=180 Identities=18% Similarity=0.139 Sum_probs=109.6
Q ss_pred CCCCCcccccCC-----cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------
Q 007213 135 PNFSLPWQRKRQ-----YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT------- 194 (612)
Q Consensus 135 ~~~~~p~~~~~~-----~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~------- 194 (612)
....+||..... ....|+|.+|++.||||+|||+.+ .+.|.+.. ....+..+-+..++
T Consensus 8 ~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~ 85 (224)
T 1cgh_A 8 RPHSRPYMAYLQIQSPAGQSRCGGFLVREDFVLTAAHCWGS--NINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTI 85 (224)
T ss_dssp CTTSSTTEEEEEESTTTTSCEEEEEEEETTEEEECGGGCCS--SEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTT
T ss_pred CCCCCCcEEEEEEECCCCCeEEEEEEeeCCEEEEhHHhCCC--CCEEEEeecccCCCCCccEEEEEEEEEcCCCCCCCCC
Confidence 334566664321 136899999999999999999976 45666531 12344554445554
Q ss_pred CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC------ceeEEEEEEeceeeecccCCceeeeEE
Q 007213 195 ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHGSTELLGL 264 (612)
Q Consensus 195 ~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~~~~~~~~~~~~i 264 (612)
.+|||||+++.+ .+...+.|+.|.... ..|+.+++.||..... ...+..-+++...|...........++
T Consensus 86 ~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~ 165 (224)
T 1cgh_A 86 QNDIMLLQLSRRVRRNRNVNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQI 165 (224)
T ss_dssp BSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTCCTTTEE
T ss_pred cCCEEEEEECCCCcCCCceEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcCCCcceE
Confidence 369999999865 344568899997533 4589999999875321 112233333333333211110111245
Q ss_pred EEc-----cCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 265 QID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 265 ~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
+.. ...|.|+|||||+. +|.++||++.+.. .....+...-+...+.++++..
T Consensus 166 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~--~~~~p~vyt~V~~~~~WI~~~~ 222 (224)
T 1cgh_A 166 CVGDRRERKAAFKGDSGGPLLC-NNVAHGIVSYGKS--SGVPPEVFTRVSSFLPWIRTTM 222 (224)
T ss_dssp EECCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECCT--TCCSCEEEEEGGGGHHHHHHHH
T ss_pred eeccCCCCCeEeeCCCccceEE-ccEEEEEEEEECC--CCCCCeEEEEHHHhHHHHHHHh
Confidence 552 36789999999997 5899999997542 1222344455555666665543
No 56
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.43 E-value=3.9e-12 Score=126.06 Aligned_cols=185 Identities=15% Similarity=0.102 Sum_probs=114.7
Q ss_pred CCCCCcccccCC----cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC-------CCcEE--EEEEEEecc-------
Q 007213 135 PNFSLPWQRKRQ----YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG-------SDTKY--LATVLAIGT------- 194 (612)
Q Consensus 135 ~~~~~p~~~~~~----~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~-------~g~~~--~a~vv~~d~------- 194 (612)
....+||..... ....|+|.+|++.||||+|||+... +.|.+.. ..... ....+..++
T Consensus 8 ~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 85 (234)
T 3s9c_A 8 NINEHPFLVALYTSASSTIHCAGALINREWVLTAAHCDRRN--IRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGL 85 (234)
T ss_dssp CTTSCTTEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTT--EEEEESCSSSSSCCTTCEEECEEEEECCSSCSSTTCG
T ss_pred CCCCCCeEEEEEECCCCcEEEeeEEeeCCEEEEchhhcCCC--ceEEEeecccccccCCcceEEeeeEEEeCCCCCCCCC
Confidence 334566664321 3457999999999999999999754 4455421 11111 122222232
Q ss_pred CCCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC------ceeEEEEEEeceeeecccC-CceeeeEEE
Q 007213 195 ECDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVH-GSTELLGLQ 265 (612)
Q Consensus 195 ~~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~~~~~-~~~~~~~i~ 265 (612)
.+|||||+++.+ .+...+.|+.|... ...|+.+++.||..... ...+...+++...|..... ......+++
T Consensus 86 ~~DIALl~L~~~v~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~C 165 (234)
T 3s9c_A 86 DKDIMLIRLRRPVTYSTHIAPVSLPSRSRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLC 165 (234)
T ss_dssp GGCCEEEEESSCCCCBTTBCCCBCCSSCCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSSEEE
T ss_pred cCceEEEEECCccccCCcccccccCCCCCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcceEE
Confidence 359999999865 34567889999863 45699999999964321 1234455555555543221 111123455
Q ss_pred E-----ccCCCCCCCCCeEecCCCeEEEEEecccC-CCccceeecccChhhHHHHHHHHHHcC
Q 007213 266 I-----DAAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYEKNG 322 (612)
Q Consensus 266 ~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aIPi~~i~~~l~~l~~~g 322 (612)
. ....|.|+|||||+. +++++||++.+.. .......+....+...+.++++..+..
T Consensus 166 a~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~ 227 (234)
T 3s9c_A 166 AGILKGGRDTCHGDSGGPLIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGN 227 (234)
T ss_dssp EECTTSSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred eecCCCCCccCCCCCCCeEEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCC
Confidence 5 246789999999996 5889999998643 212223455666777788887776544
No 57
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.42 E-value=4.8e-12 Score=126.80 Aligned_cols=195 Identities=16% Similarity=0.140 Sum_probs=117.5
Q ss_pred CcEEEEeeeeCCCCCCcccccC---CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEe
Q 007213 124 AVVKVFCVHTEPNFSLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAI 192 (612)
Q Consensus 124 SVV~I~~~~~~~~~~~p~~~~~---~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~ 192 (612)
.+-+|..........+||+... .....|+|.+|++.||||+|||+.+. ...|.+.. ..+.+..+-+..
T Consensus 12 ~~~rIvgG~~a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~-~~~v~~G~~~~~~~~~~~~~~~v~~i~~ 90 (245)
T 1t8o_A 12 GLSRIVNGEEAVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVTT-SDVVVAGEFDQGSSSEKIQKLKIAKVFK 90 (245)
T ss_dssp ----CBTCEECCTTSSTTEEEEECTTCCEEEEEEEEETTEEEECGGGCCCT-TSEEEESCSBTTCSSSCCEEEEEEEEEE
T ss_pred CCCceECCEECCCCCCCceEEEEcCCCCeEEEEEEeeCCEEEEcHHhCcCC-CcEEEEeeeecCCCCCCcEEEEEEEEEe
Confidence 4446666666666778887543 23468999999999999999999763 34455421 123344444444
Q ss_pred cc-------CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeec
Q 007213 193 GT-------ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILS 253 (612)
Q Consensus 193 d~-------~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~ 253 (612)
++ .+|||||+++.+ .+.+.+.|+.|.... ..|+.+++.||..... ...+..-+++...|..
T Consensus 91 hp~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~ 170 (245)
T 1t8o_A 91 NSKYNSLTINNDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKK 170 (245)
T ss_dssp CTTCCTTTCCSCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHHH
T ss_pred CCCCCCCCCCCCEEEEEECCCCcCCCceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhhH
Confidence 43 469999999865 345578899987532 3589999999864321 1123334444444432
Q ss_pred ccCCceeeeEEEEc---cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 254 YVHGSTELLGLQID---AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 254 ~~~~~~~~~~i~~d---a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
.........+++.. ...|.|+|||||+.. +| .++||++.+.........+...-+...+.++++..
T Consensus 171 ~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~ 242 (245)
T 1t8o_A 171 YWGTKIKDAMICAGASGVSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTL 242 (245)
T ss_dssp HHGGGCCTTEEEEECSSCBCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEGGGTHHHHHHHH
T ss_pred hhcCcCCCceEEccCCCCccCcccCcCCEEEEECCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHH
Confidence 21111111245542 357899999999965 45 79999997543222222344555666666666544
No 58
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.42 E-value=4.8e-12 Score=125.16 Aligned_cols=167 Identities=17% Similarity=0.149 Sum_probs=103.8
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------CCCeEEEEecccc-ccCC
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT-------ECDIAMLTVEDDE-FWEG 211 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~-------~~DLAlLkv~~~~-~~~~ 211 (612)
...|+|.+|++.||||+|||+.+ .+.|.+.. ..+.+..+-+..++ .+||||||++.+. +...
T Consensus 26 ~~~CgGtLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1iau_A 26 LKRCGGFLIRDDFVLTAAHCWGS--SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRA 103 (227)
T ss_dssp EEEEEEEEEETTEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred ceEEEEEEEcCCEEEECHHhCCC--ceEEEEccccccCCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEECCcccCCCc
Confidence 36899999999999999999975 46666632 12334444444444 4699999998653 4456
Q ss_pred eeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCCceee-eEEEEc-----cCCCCCCC
Q 007213 212 VLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTEL-LGLQID-----AAINSGNS 275 (612)
Q Consensus 212 l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~~~~~-~~i~~d-----a~i~~G~S 275 (612)
+.|+.|.... ..|+.+++.||..... ...+..-+++...|.......... .++++. ...|.|+|
T Consensus 104 v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 183 (227)
T 1iau_A 104 VQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDS 183 (227)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTTTCCTTTEEEESCTTSCCBCCTTCT
T ss_pred eecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhccccCCCcEEEeECCCCCCeeeecCC
Confidence 8899987633 4589999999975321 112222333333333211111111 145552 36788999
Q ss_pred CCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 276 GGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 276 GGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
||||+. +|.++||++.+-. .....+....++....++++..
T Consensus 184 GgPL~~-~~~l~Gi~S~gc~--~~~~p~vyt~v~~~~~WI~~~~ 224 (227)
T 1iau_A 184 GGPLVC-NKVAQGIVSYGRN--NGMPPRACTKVSSFVHWIKKTM 224 (227)
T ss_dssp TSEEEE-TTEEEEEEEEECT--TSCSCEEEEEGGGGHHHHHHHH
T ss_pred CchheE-eeEEEEEEeEecC--CCCCCeEEEEHHHHHHHHHHHH
Confidence 999997 5899999997521 1122344455666666666544
No 59
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.42 E-value=3.3e-12 Score=126.07 Aligned_cols=178 Identities=15% Similarity=0.138 Sum_probs=111.3
Q ss_pred CCCCCCcccccCC--cceEEEEEEEeCCEEEecccccCCC--CeEEEEEcCC-----C----cEEEEEEEEec------c
Q 007213 134 EPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRGS-----D----TKYLATVLAIG------T 194 (612)
Q Consensus 134 ~~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~--~~i~V~~~~~-----g----~~~~a~vv~~d------~ 194 (612)
.....+||..... ....|+|.+|++.||||+|||+.+. ..+.|.+... . ..+..+-+..+ .
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y~~~~~ 86 (225)
T 1a7s_A 7 ARPRQFPFLASIQNQGRHFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQN 86 (225)
T ss_dssp CCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSSCBTTTT
T ss_pred CCCCCCCcEEEEecCCCcEEEEEEeeCCEEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecccccCCCC
Confidence 3344567765322 3468999999999999999999753 4577777321 1 33443333332 3
Q ss_pred CCCeEEEEecccc-ccCCeeeeEcCCCC---CCCCeEEEEEeCCCCCc-------eeEEEEEEeceeeecccCCceeeeE
Q 007213 195 ECDIAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYVHGSTELLG 263 (612)
Q Consensus 195 ~~DLAlLkv~~~~-~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~~-------~sv~~GiIs~~~~~~~~~~~~~~~~ 263 (612)
.+|||||+++.+. +...+.|+.|.... ..|+.+++.||...... ..+..-+++...|.. .+
T Consensus 87 ~~DIALl~L~~~~~~~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~--------~~ 158 (225)
T 1a7s_A 87 LNDLMLLQLDREANLTSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCRP--------NN 158 (225)
T ss_dssp BSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSCT--------TE
T ss_pred cCCEEEEEcCCcccCCCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhcc--------Cc
Confidence 4799999998653 44568888887532 45899999999754211 122223333333321 23
Q ss_pred EEE-----ccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHHc
Q 007213 264 LQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEKN 321 (612)
Q Consensus 264 i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~~ 321 (612)
++. ....|.|+|||||+.. |.++||++.+...-+.. .+...-+...+.++++..+.
T Consensus 159 ~Ca~~~~~~~~~C~GDSGgPl~~~-g~l~Gi~S~g~~~C~~~-p~vyt~V~~~~~WI~~~~~~ 219 (225)
T 1a7s_A 159 VCTGVLTRRGGICNGDGGTPLVCE-GLAHGVASFSLGPCGRG-PDFFTRVALFRDWIDGVLNN 219 (225)
T ss_dssp EEEECSSSSCBCCTTCTTCEEEET-TEEEEEEEEECSSTTSS-CEEEEEGGGGHHHHHHHHHS
T ss_pred eEEeccCCCCCcccCCCcchheeC-CEEEEEEEEccCCcCCC-CcEEEEhHHhHHHHHHHhcC
Confidence 443 2367899999999975 89999999863211111 45566677777787776654
No 60
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.42 E-value=1.7e-12 Score=129.47 Aligned_cols=190 Identities=15% Similarity=0.119 Sum_probs=106.5
Q ss_pred EEeeeeCCCCCCcccccCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEec----
Q 007213 128 VFCVHTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIG---- 193 (612)
Q Consensus 128 I~~~~~~~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d---- 193 (612)
|..........+||+.... ....|+|.+|++.||||+|||+.+. +.|.+.. .+..+..+-+..+
T Consensus 4 IvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~ 81 (240)
T 1sgf_A 4 PVQSQVDCENSQPWHVAVYRFNKYQCGGVLLDRNWVLTAAHCYNDK--YQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFN 81 (240)
T ss_dssp ---------CCCTTEEEEECTTSCCEEEEECSSSEEEECGGGCCSC--CEEEECC----C-CTTCEEEEEEEEEECTTSC
T ss_pred ccCCeECCCCCcCCEEEEEeCCCeEEEEEEecCCEEEECHHhCCCC--ceEEeCCcccccCCCCceEEEEEEEEcCCCCc
Confidence 3333444445667765431 2357999999999999999999743 4444421 1223333333332
Q ss_pred --------------cCCCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCCc--------eeEEEEEEece
Q 007213 194 --------------TECDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGDT--------ISVTSGVVSRI 249 (612)
Q Consensus 194 --------------~~~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~~--------~sv~~GiIs~~ 249 (612)
..+|||||+++.+ .+.+.+.|+.|... ...|+.+++.||...... ..+..-+++..
T Consensus 82 ~~~~~~~~~~~~~~~~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~ 161 (240)
T 1sgf_A 82 MSLLNEHTPQPEDDYSNDLMLLRLSKPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNE 161 (240)
T ss_dssp GGGC----CCTTCBCTTCCEEEEESSCCCCCSSCCCCCCCCSCCCTTCEEEEC-------C---------CEEEEEECTH
T ss_pred ccccccccccccCCCCCceEEEEeCCcCcCCCcccccCCCCCCCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHH
Confidence 2469999999865 34556889999863 456899999998653211 12333444444
Q ss_pred eeecccCCceeeeEEEEc-----cCCCCCCCCCeEecCCCeEEEEEecccC-CCccceeecccChhhHHHHHHHHHH
Q 007213 250 EILSYVHGSTELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 250 ~~~~~~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
.|...........+++.. ...|.|+|||||+. +|.++||++.+.. .......+....+...+.++++..+
T Consensus 162 ~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 237 (240)
T 1sgf_A 162 DCDKAHEMKVTDAMLCAGEMDGGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMA 237 (240)
T ss_dssp HHHTTCSSBCCTTEEEEEECSSSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHH
T ss_pred HhhhhhCCCcCCCeEeEccCCCCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHHh
Confidence 443221111112345542 24789999999997 6899999997522 1111223445666667777766554
No 61
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.42 E-value=1.9e-12 Score=128.12 Aligned_cols=184 Identities=18% Similarity=0.154 Sum_probs=114.5
Q ss_pred CCCCCCcccccCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc-------CC
Q 007213 134 EPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT-------EC 196 (612)
Q Consensus 134 ~~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~-------~~ 196 (612)
.....+||+.... ....|+|.+|++.||||+|||+.+...+.|.+... ...+..+-+..++ .+
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~ 86 (226)
T 1azz_A 7 AVPNSWPHQAALFIDDMYFCGGSLISPEWILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISN 86 (226)
T ss_dssp CCTTSSTTEEEEEETTTEEEEEEEEETTEEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTTBS
T ss_pred CCCCCcCCEEEEEECCcEEEEEEEecCCEEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCCCC
Confidence 3344667765432 34689999999999999999999877888887421 1233333333433 47
Q ss_pred CeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccCCceeeeEEEE
Q 007213 197 DIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHGSTELLGLQI 266 (612)
Q Consensus 197 DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~~~~~~~~i~~ 266 (612)
|||||+++.+ .+.+.+.|+.|... ...|+.+++.||..... ...+..-+++...|..... .....+++.
T Consensus 87 DiALl~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~-~~~~~~~Ca 165 (226)
T 1azz_A 87 DIAVIRLPVPVTLTAAIATVGLPSTDVGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYG-IVTDGNICI 165 (226)
T ss_dssp CCEEEECSSCCCCCSSSCCCBCCSSCCCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHS-CCCTTEEEE
T ss_pred ceEEEEECCccccCCCcccccCCCCCCCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhC-cCCCceEee
Confidence 9999999865 34456889988763 35689999999875321 0112233444433432211 111134554
Q ss_pred c----cCCCCCCCCCeEecCCCeEEEEEecccCCC-ccceeecccChhhHHHHHHHHH
Q 007213 267 D----AAINSGNSGGPAFNDKGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 267 d----a~i~~G~SGGPlvn~~G~VIGI~~~~~~~~-~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
. ...|.|+|||||+. +|.++||++.+.... .....+....+...+.++++..
T Consensus 166 ~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 222 (226)
T 1azz_A 166 DSTGGKGTCNGDSGGPLNY-NGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQT 222 (226)
T ss_dssp CCTTTCBCCTTCTTCEEEE-TTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHHH
T ss_pred cCCCCCccCCCCCCcceEE-CCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHh
Confidence 3 35789999999994 789999999864211 1122334455566666666544
No 62
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.42 E-value=4.5e-12 Score=126.11 Aligned_cols=183 Identities=16% Similarity=0.157 Sum_probs=112.4
Q ss_pred CCCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc---------
Q 007213 134 EPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT--------- 194 (612)
Q Consensus 134 ~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~--------- 194 (612)
.....+||+... .....|+|.+|++.||||+|||+.+ .+.|.+.. ..+.+..+-+..++
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~ 84 (238)
T 1spj_A 7 CEQHSQPWQAALYHFSTFQCGGILVHRQWVLTAAHCISD--NYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLEN 84 (238)
T ss_dssp CCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGCCS--SEEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGCC
T ss_pred CCCCCCCcEEEEEeCCCeeEEEEEecCCEEEEcHHhCCC--CceEEEEeccccCCCCCceEEEEEEEEcCCCcccccccc
Confidence 344567777543 2346899999999999999999975 35555521 12233333333332
Q ss_pred ---------CCCeEEEEecccc--ccCCeeeeEcCC-CCCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecc
Q 007213 195 ---------ECDIAMLTVEDDE--FWEGVLPVEFGE-LPALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSY 254 (612)
Q Consensus 195 ---------~~DLAlLkv~~~~--~~~~l~pl~l~~-~~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~ 254 (612)
.+|||||+++.+. +...++|+.|.. ....|+.+++.||..... ...+..-+++...|...
T Consensus 85 ~~~~~~~~~~~DIALl~L~~~~~~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~ 164 (238)
T 1spj_A 85 HTRQADEDYSHDLMLLRLTEPADTITDAVKVVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKA 164 (238)
T ss_dssp --CTTTCCCTTCCEEEEESSCCCCSSTTCCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHH
T ss_pred ccccccccCCCCeEEEEECccccccCCceeeccCCCCCCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhhhh
Confidence 3699999998653 455688888875 345689999999864321 12234445554444332
Q ss_pred cCCceeeeEEEEc-----cCCCCCCCCCeEecCCCeEEEEEeccc-CCCccceeecccChhhHHHHHHHHH
Q 007213 255 VHGSTELLGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 255 ~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~-~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
........++++. ...|.|+|||||+. +|.++||++.+. ........+...-+...++++++..
T Consensus 165 ~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i 234 (238)
T 1spj_A 165 HVQKVTDFMLCVGHLEGGKDTCVGDSGGPLMC-DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTI 234 (238)
T ss_dssp CSSCCCTTEEEEECTTCSSBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred ccCCCCCCeEEeeCCCCCCCCCCCCCCCcEEE-cCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 2111112345552 36789999999996 589999999853 2111122344455566666666544
No 63
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.42 E-value=3.8e-12 Score=125.19 Aligned_cols=161 Identities=17% Similarity=0.189 Sum_probs=99.6
Q ss_pred ceEEEEEEEeCCEEEecccccCCCC--eEEEEEcCC--------CcEEEEEEEEec------cCCCeEEEEeccc-cccC
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHYT--QVKLKKRGS--------DTKYLATVLAIG------TECDIAMLTVEDD-EFWE 210 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~~--~i~V~~~~~--------g~~~~a~vv~~d------~~~DLAlLkv~~~-~~~~ 210 (612)
...|+|.+|++.||||+|||+.+.. .+.|.+... ...+..+-+..+ ..+|||||+++.+ .+..
T Consensus 26 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~~~~~~~ 105 (221)
T 1fuj_A 26 SHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPANLSA 105 (221)
T ss_dssp CCCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESSCCCCCS
T ss_pred CEEEEEEEecCCEEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCCccccCC
Confidence 4579999999999999999998643 577777321 233333333332 3579999999865 3455
Q ss_pred CeeeeEcCCCC---CCCCeEEEEEeCCCCCc-------eeEEEEEEeceeeecccCCceeeeEEEE-----ccCCCCCCC
Q 007213 211 GVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYVHGSTELLGLQI-----DAAINSGNS 275 (612)
Q Consensus 211 ~l~pl~l~~~~---~~G~~V~aiG~p~g~~~-------~sv~~GiIs~~~~~~~~~~~~~~~~i~~-----da~i~~G~S 275 (612)
.+.|+.|.... ..|+.+++.||...... ..+..-++ ...+.. .+++. ....|.|+|
T Consensus 106 ~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~--------~~~Ca~~~~~~~~~C~GDS 176 (221)
T 1fuj_A 106 SVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TFFCRP--------HNICTFVPRRKAGICFGDS 176 (221)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CTTCCT--------TEEEEECSSSSCBCCTTCT
T ss_pred cceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-eeecCC--------ceeeeccCCCCCCCCCCCC
Confidence 68899997633 45899999999753211 11112222 111111 13443 246789999
Q ss_pred CCeEecCCCeEEEEEecccC-CCccceeecccChhhHHHHHHHH
Q 007213 276 GGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 276 GGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
||||+. +|.++||++.... .......+....+...+.++++.
T Consensus 177 GgPL~~-~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~ 219 (221)
T 1fuj_A 177 GGPLIC-DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRST 219 (221)
T ss_dssp TCEEEE-TTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHH
T ss_pred CCeeEE-CCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHH
Confidence 999997 6899999987321 11111233445555566666543
No 64
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.42 E-value=7.6e-12 Score=124.97 Aligned_cols=185 Identities=16% Similarity=0.124 Sum_probs=112.7
Q ss_pred CCCCCcccccCC------cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc------
Q 007213 135 PNFSLPWQRKRQ------YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT------ 194 (612)
Q Consensus 135 ~~~~~p~~~~~~------~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~------ 194 (612)
....+||..... ....|+|.+|++.||||+|||+.....+.|.+... ...+..+-+..++
T Consensus 8 ~~~~~Pw~v~l~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~ 87 (241)
T 1bru_P 8 RPNSWPWQVSLQYDSSGQWRHTCGGTLVDQSWVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQ 87 (241)
T ss_dssp CTTSSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTC
T ss_pred CCCCcCcEEEEEEecCCceeeEEEeEEeeCCEEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECCCCCCCC
Confidence 334566654322 13689999999999999999998656778887421 2344444444443
Q ss_pred -C--CCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeeccc-CC-c
Q 007213 195 -E--CDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYV-HG-S 258 (612)
Q Consensus 195 -~--~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~-~~-~ 258 (612)
. +|||||+++.+ .+.+.+.|+.|.... ..|+.+++.||..... ...+..-+++...|.... .+ .
T Consensus 88 ~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~ 167 (241)
T 1bru_P 88 LSNGNDIALLKLASPVSLTDKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGST 167 (241)
T ss_dssp GGGCCCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTTTTGGG
T ss_pred CCCCCcEEEEEeCCCcccCCccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcccccCCc
Confidence 2 79999999865 345568898887632 3578999999865321 122334445544443210 11 1
Q ss_pred eeeeEEEEc----cCCCCCCCCCeEecC--CC--eEEEEEeccc--CCCccceeecccChhhHHHHHHHHH
Q 007213 259 TELLGLQID----AAINSGNSGGPAFND--KG--KCVGIAFQSL--KHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 259 ~~~~~i~~d----a~i~~G~SGGPlvn~--~G--~VIGI~~~~~--~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
....+|+.. ...|.|+|||||+.. +| .++||++.+. ........+...-+...+.++++..
T Consensus 168 ~~~~~~Ca~~~~~~~~C~GDSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i 238 (241)
T 1bru_P 168 VKTNMICAGGDGIISSCNGDSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVI 238 (241)
T ss_dssp CCTTEEEECCSSSSBCCTTCTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHH
T ss_pred CCCceEeecCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHH
Confidence 112345553 357899999999964 46 7999999854 1111122334445555566665543
No 65
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.41 E-value=1.1e-11 Score=123.75 Aligned_cols=183 Identities=11% Similarity=0.113 Sum_probs=114.1
Q ss_pred CCcccccC--CcceEEEEEEEeCCEEEecccccCCC--CeEEEEEcCC----------CcEEEEEEEEecc-CCCeEEEE
Q 007213 138 SLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRGS----------DTKYLATVLAIGT-ECDIAMLT 202 (612)
Q Consensus 138 ~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~--~~i~V~~~~~----------g~~~~a~vv~~d~-~~DLAlLk 202 (612)
.+||.... .....|+|.+|++.||||+|||+.+. ..+.|.+... ...+..+-+.+++ .+|||||+
T Consensus 10 ~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~ 89 (240)
T 1si5_H 10 NIGWMVSLRYRNKHICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMK 89 (240)
T ss_dssp CCTTEEEEEESSSEEEEEEEEETTEEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEE
T ss_pred CCCeEEEEEeCCCeEEEEEEeeCCEEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEE
Confidence 45665432 13468999999999999999999754 4677777311 1233333333444 68999999
Q ss_pred eccc-cccCCeeeeEcCCC---CCCCCeEEEEEeCCCCC------ceeEEEEEEeceeeecccCCc--eeeeEEEEc---
Q 007213 203 VEDD-EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHGS--TELLGLQID--- 267 (612)
Q Consensus 203 v~~~-~~~~~l~pl~l~~~---~~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~~~~~~~--~~~~~i~~d--- 267 (612)
++.+ .+.+.+.|+.|... ...|+.+++.||..... ...+..-+++...|....... ....+++..
T Consensus 90 L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~ 169 (240)
T 1si5_H 90 LARPAVLDDFVSTIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEK 169 (240)
T ss_dssp ESSCCCCSSSCCCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSS
T ss_pred ECCccccCCceeccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCC
Confidence 9865 34456889988763 23588999999865421 123334455554444322111 112345542
Q ss_pred --cCCCCCCCCCeEecCCC---eEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 268 --AAINSGNSGGPAFNDKG---KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 268 --a~i~~G~SGGPlvn~~G---~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
...|.|+|||||+..++ .++||++.+.........+....+...+.++++..+
T Consensus 170 ~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~ 227 (240)
T 1si5_H 170 IGSGPCEGDYGGPLVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIIL 227 (240)
T ss_dssp SCCBCCTTCTTCEEEEECSSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred CCCEeccCCCCCcEEEEECCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 46789999999997643 799999986432222234555667777777777654
No 66
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.41 E-value=5.6e-12 Score=124.78 Aligned_cols=186 Identities=17% Similarity=0.120 Sum_probs=113.5
Q ss_pred CCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC------CCcE-EEEEEEEecc-------CCCe
Q 007213 135 PNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG------SDTK-YLATVLAIGT-------ECDI 198 (612)
Q Consensus 135 ~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~------~g~~-~~a~vv~~d~-------~~DL 198 (612)
....+||.... .....|+|.+|++.||||+|||+.....+.+.... +... ...+.+..++ .+||
T Consensus 8 ~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DI 87 (234)
T 3s69_A 8 NINEHRSLVAFFNSTGFFCSGTLINEEWVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDI 87 (234)
T ss_dssp CTTSCTTEEEEECSSCEEEEEEEEETTEEEECGGGCCSSCEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTSSCC
T ss_pred CCCCCceEEEEeeCCCeEEeEEEeeCCEEEEchhhCCCCceEEecccccccccCCcceeeceEEEECCCccCCCCCcccE
Confidence 33456666432 23468999999999999999999755444333211 1111 1223333232 4699
Q ss_pred EEEEeccc-cccCCeeeeEcCC-CCCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccC-CceeeeEEEE-
Q 007213 199 AMLTVEDD-EFWEGVLPVEFGE-LPALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVH-GSTELLGLQI- 266 (612)
Q Consensus 199 AlLkv~~~-~~~~~l~pl~l~~-~~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~-~~~~~~~i~~- 266 (612)
|||+++.+ .+...+.|+.|.. ....|+.+++.||..... ...+..-+++...|..... ......+++.
T Consensus 88 ALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~ 167 (234)
T 3s69_A 88 MLIKLDSRVSNSEHIVPLSLPSSPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTLCAG 167 (234)
T ss_dssp EEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTSCEEEEE
T ss_pred EEEeeCCcCCCCCcceeeecCCCCCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCcceEecc
Confidence 99999865 3455788999876 345699999999975321 1123344455444432211 1111134554
Q ss_pred ----ccCCCCCCCCCeEecCCCeEEEEEecccC-CCccceeecccChhhHHHHHHHHHHc
Q 007213 267 ----DAAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYEKN 321 (612)
Q Consensus 267 ----da~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aIPi~~i~~~l~~l~~~ 321 (612)
....|.|+|||||+. +++++||++.+.. .......+...-+...+.++++..+.
T Consensus 168 ~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 226 (234)
T 3s69_A 168 ILEGGKDTCGGDSGGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAG 226 (234)
T ss_dssp CTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred CCCCCCccCCCCCccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcC
Confidence 346789999999996 6889999998643 21222345566677778888777654
No 67
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.41 E-value=4e-12 Score=126.14 Aligned_cols=183 Identities=14% Similarity=0.109 Sum_probs=112.6
Q ss_pred CCCCCcccccCC-cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC-C--------CcEEEEEEEEecc-------CCC
Q 007213 135 PNFSLPWQRKRQ-YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG-S--------DTKYLATVLAIGT-------ECD 197 (612)
Q Consensus 135 ~~~~~p~~~~~~-~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~-~--------g~~~~a~vv~~d~-------~~D 197 (612)
....+||..... ....|+|.+|++.||||+|||+.+. +.|.+.. + .+.+..+-+..++ .+|
T Consensus 8 ~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~D 85 (231)
T 2aiq_A 8 NINEHRFLALVYANGSLCGGTLINQEWVLTARHCDRGN--MRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKD 85 (231)
T ss_dssp CTTSCTTEEEEEETTEEEEEEECSSSEEEECGGGCCSS--CEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTTTC
T ss_pred CCCCCCeEEEEEcCCCeEEEEEEeCCEEEEcHHcCCCC--CEEEEecccccccCCCceEEEEEEEEEECCCCCCCCCCCC
Confidence 344566664322 2357999999999999999999874 3444421 1 1123333333333 469
Q ss_pred eEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccCCceeeeEEEEc
Q 007213 198 IAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHGSTELLGLQID 267 (612)
Q Consensus 198 LAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~~~~~~~~i~~d 267 (612)
||||+++.+ .+...+.|+.|... ...|+.+++.||..... ...+..-+++...|...... ....+++..
T Consensus 86 IALl~L~~~v~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~-~~~~~~Ca~ 164 (231)
T 2aiq_A 86 IMLIRLNRPVRNSAHIAPLSLPSNPPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKG-LAATTLCAG 164 (231)
T ss_dssp CEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTT-CCSSEEEEE
T ss_pred EEEEEecCCCCCCCcEEeeECCCCCCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcC-CCcCcEEec
Confidence 999999875 34456889999863 35689999999975321 11233444444444322111 112345542
Q ss_pred -----cCCCCCCCCCeEecCCCeEEEEEecc-cCCCccceeecccChhhHHHHHHHHHHc
Q 007213 268 -----AAINSGNSGGPAFNDKGKCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDYEKN 321 (612)
Q Consensus 268 -----a~i~~G~SGGPlvn~~G~VIGI~~~~-~~~~~~~~~~~aIPi~~i~~~l~~l~~~ 321 (612)
...|.|+|||||+. +|.++||++.+ .........+....+...+.++++..+.
T Consensus 165 ~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 223 (231)
T 2aiq_A 165 ILEGGKDTCKGDSGGPLIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG 223 (231)
T ss_dssp CTTCSCBCCTTCTTCEEEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred cCCCCCcccCCcCCCcEEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence 36789999999997 58999999975 2211122334556677777777776553
No 68
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.41 E-value=5.4e-12 Score=125.25 Aligned_cols=185 Identities=15% Similarity=0.114 Sum_probs=113.4
Q ss_pred CCCCcccccC----CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC-----CCc--EEEEEEEEecc-------CCC
Q 007213 136 NFSLPWQRKR----QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG-----SDT--KYLATVLAIGT-------ECD 197 (612)
Q Consensus 136 ~~~~p~~~~~----~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~-----~g~--~~~a~vv~~d~-------~~D 197 (612)
...+||.... .....|+|.+|++.||||+|||+.....+.+.... ... .+..+.+..++ .+|
T Consensus 9 ~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~D 88 (238)
T 4e7n_A 9 INEHRFLVALYTSRSRTLFCGGTLINQEWVLTAAHCDRKNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKD 88 (238)
T ss_dssp TTSCTTEEEEECTTTCCEEEEEEECSSSEEEECGGGCCSSCEEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSSSCC
T ss_pred CCCcCcEEEEEECCCCCEEEEEEEecCCEEEEhHHcCCCCCeEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCCCCc
Confidence 3455665432 23468999999999999999999765444433221 011 12222332222 469
Q ss_pred eEEEEeccc-cccCCeeeeEcCC-CCCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccC---CceeeeEE
Q 007213 198 IAMLTVEDD-EFWEGVLPVEFGE-LPALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVH---GSTELLGL 264 (612)
Q Consensus 198 LAlLkv~~~-~~~~~l~pl~l~~-~~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~---~~~~~~~i 264 (612)
||||+++.+ .+...+.|+.|.. ....|+.+++.||..... ...+..-+++...|..... ......++
T Consensus 89 IALl~L~~~v~~~~~v~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~ 168 (238)
T 4e7n_A 89 IMLIRLDSPVKNSKHIAPFSLPSSPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTL 168 (238)
T ss_dssp CEEEEESSCCCCBTTBCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEE
T ss_pred EEEEEeCCCccCCCceeeeeCCCCCCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCCCeE
Confidence 999999865 3455788999976 345699999999975321 1234445555555443211 11112345
Q ss_pred EEc-----cCCCCCCCCCeEecCCCeEEEEEecccC-CCccceeecccChhhHHHHHHHHHHc
Q 007213 265 QID-----AAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDYEKN 321 (612)
Q Consensus 265 ~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aIPi~~i~~~l~~l~~~ 321 (612)
+.. ...|.|+|||||+. +++++||++.+.. .......+...-+...+.++++..+.
T Consensus 169 Ca~~~~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 230 (238)
T 4e7n_A 169 CAGILEGGKDTCKGDSGGPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAG 230 (238)
T ss_dssp EEECTTCSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTT
T ss_pred EeCCCCCCCccCCCCCCcceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhc
Confidence 542 46789999999996 6899999998643 11222345556667777777776653
No 69
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.41 E-value=5.7e-12 Score=124.57 Aligned_cols=182 Identities=17% Similarity=0.208 Sum_probs=110.7
Q ss_pred CCCCcccccCC--cceEEEEEEEeCCEEEecccccCCCC--eEEEEEcCC--------CcEEEEEEEEecc-------CC
Q 007213 136 NFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYT--QVKLKKRGS--------DTKYLATVLAIGT-------EC 196 (612)
Q Consensus 136 ~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~~--~i~V~~~~~--------g~~~~a~vv~~d~-------~~ 196 (612)
...+||..... ....|+|.+|++.||||+|||+.+.. .+.|.+... .+.+...-+..++ .+
T Consensus 9 ~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~ 88 (228)
T 2xw9_A 9 AHARPYMASVQLNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDH 88 (228)
T ss_dssp TTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCCTT
T ss_pred CCCCCcEEEEEECCCeEEEEEEEeCCEEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCCCC
Confidence 34556654321 24689999999999999999997543 678877321 2334444444444 36
Q ss_pred CeEEEEeccc-cccCCeeeeEcCCC---CCCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccC--CceeeeE
Q 007213 197 DIAMLTVEDD-EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVH--GSTELLG 263 (612)
Q Consensus 197 DLAlLkv~~~-~~~~~l~pl~l~~~---~~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~--~~~~~~~ 263 (612)
|||||+++.+ .+...+.|+.|... ...|+.+++.||..... ...+..-+++...|..... ......+
T Consensus 89 DIAll~L~~~~~~~~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~ 168 (228)
T 2xw9_A 89 DLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERL 168 (228)
T ss_dssp CCEEEEESSCCCCBTTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTTCCCTTE
T ss_pred cEEEEEeCCCcccCCCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCCcccCCE
Confidence 9999999865 34456888888752 24588999999875321 1122333444444432211 1111234
Q ss_pred EEEc---cCCCCCCCCCeEecCCCeEEEEEeccc-CCCccceeecccChhhHHHHHHHH
Q 007213 264 LQID---AAINSGNSGGPAFNDKGKCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 264 i~~d---a~i~~G~SGGPlvn~~G~VIGI~~~~~-~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
++.. ...|.|+|||||+. +|.++||++... ........+....+...+.++++.
T Consensus 169 ~Ca~~~~~~~C~GDsGgPL~~-~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~ 226 (228)
T 2xw9_A 169 MCAESNRRDSCKGDAGGPLVC-GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSV 226 (228)
T ss_dssp EEECCSSCBCCTTCTTCEEEE-TTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHH
T ss_pred EecCCCCCccCCCCCcccEEE-CCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHH
Confidence 5542 46789999999997 589999998754 111112234455566666666554
No 70
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.41 E-value=2.5e-12 Score=126.45 Aligned_cols=175 Identities=15% Similarity=0.125 Sum_probs=106.9
Q ss_pred CCCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCC--CeEEEEEcCC--------CcEEEEEEEEec------cC
Q 007213 134 EPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRGS--------DTKYLATVLAIG------TE 195 (612)
Q Consensus 134 ~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~--~~i~V~~~~~--------g~~~~a~vv~~d------~~ 195 (612)
.....+||.... .....|+|.+|++.||||+|||+.+. ..+.|.+... ...+..+-+..+ ..
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~ 86 (218)
T 2z7f_E 7 ARPHAWPFMVSLQLRGGHFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVNLL 86 (218)
T ss_dssp CCTTSSTTEEEEEETTEEEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTTTB
T ss_pred CCCCccCcEEEEEeCCCcEEEEEEccCCEEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCCCC
Confidence 334456776532 23468999999999999999999864 3577776321 133443333332 34
Q ss_pred CCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCCc-------eeEEEEEEeceeeecccCCceeeeEE
Q 007213 196 CDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYVHGSTELLGL 264 (612)
Q Consensus 196 ~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~~-------~sv~~GiIs~~~~~~~~~~~~~~~~i 264 (612)
+|||||+++.+ .+.+.+.|+.|.... ..|..+++.||...... ..+..-++ ...+.. .++
T Consensus 87 ~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~~--------~~~ 157 (218)
T 2z7f_E 87 NDIVILQLNGSATINANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCRR--------SNV 157 (218)
T ss_dssp SCCEEEEESSCCCCSSSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCCT--------TSE
T ss_pred CCEEEEEECCcCcCCCceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcCc--------cee
Confidence 79999999865 344568899887632 35889999998754221 11222222 222211 124
Q ss_pred EE-----ccCCCCCCCCCeEecCCCeEEEEEecccC-CCccceeecccChhhHHHHHHHH
Q 007213 265 QI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLK-HEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 265 ~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~-~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
+. ....|.|+|||||+. +|.++||++.... .......+....+...++++++.
T Consensus 158 Ca~~~~~~~~~C~GDSGgPl~~-~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~ 216 (218)
T 2z7f_E 158 CTLVRGRQAGVCFGDSGSPLVC-NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSI 216 (218)
T ss_dssp EEECTTSCCBCCTTCTTCEEEE-TTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHH
T ss_pred eeccCCCCCeeCCCcCCCceEE-ccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHH
Confidence 43 246789999999996 6899999987221 11111234445555666666553
No 71
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.41 E-value=5.8e-12 Score=125.81 Aligned_cols=185 Identities=15% Similarity=0.133 Sum_probs=115.3
Q ss_pred CCCCCcccccC---CcceEEEEEEEeCCEEEecccccCC----------------CCeEEEEEcC--------CCcEEEE
Q 007213 135 PNFSLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEH----------------YTQVKLKKRG--------SDTKYLA 187 (612)
Q Consensus 135 ~~~~~p~~~~~---~~~~~GSGfiI~~g~ILT~aHvV~~----------------~~~i~V~~~~--------~g~~~~a 187 (612)
....+||.... .....|+|.+|++.||||+|||+.+ ...+.|.+.. ....+..
T Consensus 8 ~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v 87 (251)
T 3gov_B 8 QKGTTPWIAMLSHLNGQPFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGV 87 (251)
T ss_dssp CTTSCTTEEEEEETTCCEEEEEEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCEEECE
T ss_pred CCCCcCeEEEEeccCCCeeEEEEEecCCEEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcceEeee
Confidence 33456666432 2345899999999999999999964 2457777632 1233444
Q ss_pred EEEEeccC-------CCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC------ceeEEEEEEeceeee
Q 007213 188 TVLAIGTE-------CDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD------TISVTSGVVSRIEIL 252 (612)
Q Consensus 188 ~vv~~d~~-------~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~ 252 (612)
+-+..++. +|||||++..+ .+...+.|+.|... ...|+.+++.||..... ...+...+++...|.
T Consensus 88 ~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~ 167 (251)
T 3gov_B 88 KHTTLHPQYDPNTFENDVALVELLESPVLNAFVMPICLPEGPQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHSTCQ 167 (251)
T ss_dssp EEEEECTTCBTTTTBTCCEEEEESSCCCCSSSCCCCBCCSSCCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEECHHHHH
T ss_pred EEEEECCCCCCCCCCCCEEEEEeCCcccCCCceEEeECCCCCCCCCCEEEEEcCCCCCCCCCCccceEEeeEEECHHHhh
Confidence 44555543 69999999765 34557889999763 35689999999975421 123344455544443
Q ss_pred cccCC---ceeeeEEEEc-----cCCCCCCCCCeEecC---CC--eEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 253 SYVHG---STELLGLQID-----AAINSGNSGGPAFND---KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 253 ~~~~~---~~~~~~i~~d-----a~i~~G~SGGPlvn~---~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
..... .....+++.. ...|.|+|||||+.. +| .++||++.+.........+....+...+.++++..
T Consensus 168 ~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 247 (251)
T 3gov_B 168 KAYAPLKKKVTRDMICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRVT 247 (251)
T ss_dssp HHTTTTTCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHHHHHHHH
T ss_pred hhhhhccCCCCCCcEEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHHHHh
Confidence 22111 1112346652 467899999999964 34 69999998643322222345556666666766653
No 72
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.40 E-value=4.6e-13 Score=127.71 Aligned_cols=117 Identities=20% Similarity=0.246 Sum_probs=80.3
Q ss_pred cceEEEEEEEe-CCEEEecccccCCCCeEEEEEcCCCcEEEEEEEEeccCCCeEEEEeccccccCCeeeeEcCCCCCCCC
Q 007213 147 YSSSSSGFAIG-GRRVLTNAHSVEHYTQVKLKKRGSDTKYLATVLAIGTECDIAMLTVEDDEFWEGVLPVEFGELPALQD 225 (612)
Q Consensus 147 ~~~~GSGfiI~-~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~~~~~~G~ 225 (612)
..+.|+||.|+ +++|||++|||.+.+. .|+. ++..+. +.+|+..|+|++++.... ..++.++|+.....|.
T Consensus 28 ~~GsGt~F~i~g~~~VvTA~HVVg~~~~-vVt~--~g~r~~---~~f~~~~D~All~i~~~~--g~~P~lKlA~~~~~G~ 99 (213)
T 3fan_A 28 SMGSGGVFTIDGKIKCVTAAHVLTGNSA-RVSG--VGFNQM---LDFDVKGDFAIADCPNWQ--GVAPKAQFCEDGWTGR 99 (213)
T ss_dssp SEEEEEEEEETTEEEEEEEGGGSBTTEE-EEEE--TTEEEE---EECEEETTEEEEECTTCC--SCCCBCCBCCTTCCEE
T ss_pred CCCceEEEEECCcEEEEEeccEeCCCCE-EEec--CCcEEE---EEecCCCcEEEEEccCcC--CCCCcceeeeeeccCc
Confidence 35678899998 6799999999999888 6666 666654 477999999999996421 2678888875433333
Q ss_pred eEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecc
Q 007213 226 AVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQS 293 (612)
Q Consensus 226 ~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~ 293 (612)
..+..-+ -+..|.|..- ..+.+ .++|||||||+|.+|+||||+++.
T Consensus 100 a~~~~~~-------gv~~G~i~~~------------~al~~---T~pGdSGsPVvn~dG~VIGVHt~s 145 (213)
T 3fan_A 100 AYWLTSS-------GVEPGVIGNG------------FAFCF---TACGDSGSPVITEAGELVGVHTGS 145 (213)
T ss_dssp EEEEETT-------EEEEEEEETT------------EEEES---SCCCSTTCEEEETTSCEEEEEEC-
T ss_pred eEEEEcc-------CccccccccC------------CEEEe---cCCCCCCCccCCCCCcEEEEEecc
Confidence 3222211 1223333311 12222 268999999999999999999984
No 73
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.40 E-value=8.9e-12 Score=124.07 Aligned_cols=183 Identities=16% Similarity=0.137 Sum_probs=110.6
Q ss_pred CCCCCcccccCCc----c--eEEEEEEEeCCEEEecccccCCC-----CeEEEEEcC------CC--cEEEEEEEEecc-
Q 007213 135 PNFSLPWQRKRQY----S--SSSSGFAIGGRRVLTNAHSVEHY-----TQVKLKKRG------SD--TKYLATVLAIGT- 194 (612)
Q Consensus 135 ~~~~~p~~~~~~~----~--~~GSGfiI~~g~ILT~aHvV~~~-----~~i~V~~~~------~g--~~~~a~vv~~d~- 194 (612)
....+||...... . ..|+|.+|++.||||+|||+.+. ..+.|.+.. ++ +.+..+-+..++
T Consensus 8 ~~~~~Pw~v~l~~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~ 87 (237)
T 2f91_A 8 TLGEFPYQLSFQETFIGFSFHFCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHEN 87 (237)
T ss_dssp CTTTSTTEEEEEEEETTEEEEEEEEEEEETTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEEEECTT
T ss_pred CCCCCCcEEEEEEecCCCCcceEEEEEeeCCEEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEEEECCC
Confidence 3445666643221 1 35999999999999999999753 457777732 11 344444444544
Q ss_pred ------CCCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccC-Cc
Q 007213 195 ------ECDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVH-GS 258 (612)
Q Consensus 195 ------~~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~-~~ 258 (612)
.+|||||+++.+ .+.+.+.|+.|... ...++.+++.||..... ...+..-+++...|..... ..
T Consensus 88 y~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~ 167 (237)
T 2f91_A 88 FDYNLLDNDISLLKLSGSLTFNDNVAPIALPEQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADE 167 (237)
T ss_dssp CCTTTCTTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHHHCTTT
T ss_pred CCCCCCCCcEEEEEECCCcccCCceeeccCCCCCCCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhhhCCCC
Confidence 469999999865 34556899999864 35688999999864321 1123344455444432111 11
Q ss_pred eeeeEEEEc-----cCCCCCCCCCeEecCCC---eEEEEEecccCCCccceeecccChhhHHHHHHH
Q 007213 259 TELLGLQID-----AAINSGNSGGPAFNDKG---KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (612)
Q Consensus 259 ~~~~~i~~d-----a~i~~G~SGGPlvn~~G---~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~ 317 (612)
....+++.. ...|.|+|||||+..++ .++||++.+.........+...-+...+.++++
T Consensus 168 ~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 234 (237)
T 2f91_A 168 ILDSMICAGVPEGGKDSCQGDSGGPLAASDTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKA 234 (237)
T ss_dssp SCTTEEEECCTTCCCBCCTTCTTCEEEECTTSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHH
T ss_pred cCCCeEEEecCCCCCCCCCCcCCCCeEEecCCCEEEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHH
Confidence 112345552 35789999999997532 799999986432211222334445555555543
No 74
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.39 E-value=5.3e-13 Score=117.82 Aligned_cols=97 Identities=24% Similarity=0.348 Sum_probs=80.1
Q ss_pred CcccCCCcCCeEEeeecChhhHHhhhccc-----CCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccC
Q 007213 322 GAYTGFPLLGVEWQKMENPDLRVAMSMKA-----DQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHG 395 (612)
Q Consensus 322 g~v~~~~~lGi~~~~~~~~~~~~~lgl~~-----~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~ 395 (612)
|++. |+|||+.+..+ +++.++.++++. ...|++|..|.++|||++ ||++||+|++|||+++.++.++
T Consensus 1 G~v~-r~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~----- 73 (113)
T 2pzd_A 1 GSHM-RRYIGVMMLTL-SPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDV----- 73 (113)
T ss_dssp -----CEECCEEEEEC-CHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHH-----
T ss_pred Cccc-ccEeEEEEEeC-CHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHHH-----
Confidence 4556 89999999999 899999999842 357999999999999999 9999999999999999987763
Q ss_pred ccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEeccC
Q 007213 396 ERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATH 433 (612)
Q Consensus 396 ~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~~~ 433 (612)
...+.. |+.+.|+|.|+|+.+++.+++...
T Consensus 74 -----~~~l~~---~~~v~l~v~R~g~~~~~~v~~~~~ 103 (113)
T 2pzd_A 74 -----YEAVRT---QSQLAVQIRRGRETLTLYVTPEVT 103 (113)
T ss_dssp -----HHHHHH---CSSEEEEEEETTEEEEEEECCEEC
T ss_pred -----HHHHhC---CCeEEEEEEECCEEEEEEEEEeec
Confidence 344543 678999999999998888887643
No 75
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.39 E-value=8.7e-12 Score=124.36 Aligned_cols=172 Identities=15% Similarity=0.103 Sum_probs=106.6
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc---------CCCeEEEEeccc-ccc
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT---------ECDIAMLTVEDD-EFW 209 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~---------~~DLAlLkv~~~-~~~ 209 (612)
...|+|.+|++.||||+|||+.+...+.|.+... .+.+..+-+..++ .+|||||+++.+ .+.
T Consensus 27 ~~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (240)
T 1gvk_B 27 AHTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLN 106 (240)
T ss_dssp EEEEEEEEEETTEEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCB
T ss_pred CceEEEEEeeCCEEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEEECCccccC
Confidence 3679999999999999999998877788887421 2334444444443 569999999865 344
Q ss_pred CCeeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeeccc-CC-ceeeeEEEEc----cCCCCC
Q 007213 210 EGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYV-HG-STELLGLQID----AAINSG 273 (612)
Q Consensus 210 ~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~-~~-~~~~~~i~~d----a~i~~G 273 (612)
..+.|+.|.... ..|+.+++.||..... ...+..-+++...|.... .+ .....+++.. ...|.|
T Consensus 107 ~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 186 (240)
T 1gvk_B 107 SYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQG 186 (240)
T ss_dssp TTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCBCCTT
T ss_pred CCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhccccccCccCCcceEeecCCCCCcccCC
Confidence 568888887532 3588999999865321 112223344433343210 11 1112345553 357899
Q ss_pred CCCCeEecC-CC--eEEEEEeccc--CCCccceeecccChhhHHHHHHHHH
Q 007213 274 NSGGPAFND-KG--KCVGIAFQSL--KHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 274 ~SGGPlvn~-~G--~VIGI~~~~~--~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
+|||||+.. +| .++||++.+. ........+...-+.....++++..
T Consensus 187 DSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i 237 (240)
T 1gvk_B 187 DSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVI 237 (240)
T ss_dssp CTTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHH
T ss_pred CCcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHH
Confidence 999999864 57 8999999753 1111122334445555555655543
No 76
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.39 E-value=4.3e-12 Score=125.47 Aligned_cols=184 Identities=18% Similarity=0.153 Sum_probs=116.1
Q ss_pred CCCCCcccccC--CcceEEEEEEEeCCEEEecccccCC--CCeEEEEEcC-----CCcEEEEEEEEec------cCCCeE
Q 007213 135 PNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEH--YTQVKLKKRG-----SDTKYLATVLAIG------TECDIA 199 (612)
Q Consensus 135 ~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~--~~~i~V~~~~-----~g~~~~a~vv~~d------~~~DLA 199 (612)
....+||.... .....|+|.+|++.||||+|||+.+ ...+.|.+.. .+..+..+-+..+ ..+|||
T Consensus 8 ~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiA 87 (235)
T 3h7t_A 8 DITKEPWAVGVLVDEKPFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNNYA 87 (235)
T ss_dssp CTTTSTTEEEEEETTSCCEEEEESSSSEEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTCCE
T ss_pred CCCCCCcEEEEecCCCceEeEEEeeCCEEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCCeE
Confidence 33456666432 2345799999999999999999964 3567777742 1233443333322 347999
Q ss_pred EEEecccc-ccC-CeeeeEcCCC---CCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccCCc-----eee
Q 007213 200 MLTVEDDE-FWE-GVLPVEFGEL---PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHGS-----TEL 261 (612)
Q Consensus 200 lLkv~~~~-~~~-~l~pl~l~~~---~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~~~-----~~~ 261 (612)
||+++.+. +.. .+.|+.|... ...|+.+++.||..... ...+..-+++...|....... ...
T Consensus 88 ll~L~~~v~~~~~~v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 167 (235)
T 3h7t_A 88 VIETEMPIKLDDKTTKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYD 167 (235)
T ss_dssp EEEESSCCCCCSSSCCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCST
T ss_pred EEEeccccccCCccccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCccccC
Confidence 99998653 344 6888888763 35689999999965321 123344455544443221110 112
Q ss_pred eEEEE-----ccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 262 LGLQI-----DAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 262 ~~i~~-----da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
.+++. ....|.|+|||||+. +|+++||++.+..... ...+....+.....++++..+
T Consensus 168 ~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~C~~-~~p~vyt~v~~~~~WI~~~i~ 229 (235)
T 3h7t_A 168 GVFCAGGEYDETYIGYGDAGDPAVQ-NGTLVGVASYISSMPS-EFPSVFLRVGYYVLDIKDIIS 229 (235)
T ss_dssp TEEEECBTTTTBBCCTTCTTCEEEE-TTEEEEEECCCTTCCT-TSCEEEEEGGGGHHHHHHHHT
T ss_pred CeEecCCCCCCCccccCCCCCceee-CCeEEEEEEecCCCCC-CCCceEEEHHHHHHHHHHHHh
Confidence 34555 346789999999997 7899999998643222 334456667777777777654
No 77
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.39 E-value=9.3e-12 Score=123.77 Aligned_cols=185 Identities=16% Similarity=0.160 Sum_probs=112.8
Q ss_pred CCCCCCcccccCC---cceEEEEEEEeCCEEEecccccCCC--------CeEEEEEcC---------CCcEEEEEEEEec
Q 007213 134 EPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHY--------TQVKLKKRG---------SDTKYLATVLAIG 193 (612)
Q Consensus 134 ~~~~~~p~~~~~~---~~~~GSGfiI~~g~ILT~aHvV~~~--------~~i~V~~~~---------~g~~~~a~vv~~d 193 (612)
.....+||..... ....|+|.+|++.||||+|||+.+. ..+.|.+.. ....+..+-+..+
T Consensus 7 a~~~~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~h 86 (241)
T 3ncl_A 7 ADEGEWPWQVSLHALGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISH 86 (241)
T ss_dssp CCTTSSTTEEEEEETTTEEEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEEEEC
T ss_pred CCCCCCCcEEEEEcCCCceEEEEEEeeCCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEEEEC
Confidence 3444667765322 2357999999999999999999642 346676631 1234455555555
Q ss_pred c-------CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeeccc
Q 007213 194 T-------ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYV 255 (612)
Q Consensus 194 ~-------~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~ 255 (612)
+ .+||||||++.+ .+...+.|+.|.... ..|+.+++.||..... ...+...+++...|....
T Consensus 87 p~y~~~~~~~DIALl~L~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 166 (241)
T 3ncl_A 87 PFFNDFTFDYDIALLELEKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENLL 166 (241)
T ss_dssp TTCCTTTCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHHHHHS
T ss_pred CCCCCCCCCCcEEEEEECCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHhhhhc
Confidence 4 469999999865 345578899997532 3589999999964321 112233344444443322
Q ss_pred CCceeeeEEEEc-----cCCCCCCCCCeEec--CCCe--EEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 256 HGSTELLGLQID-----AAINSGNSGGPAFN--DKGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 256 ~~~~~~~~i~~d-----a~i~~G~SGGPlvn--~~G~--VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
.......+++.. ...|.|+|||||+. .+|+ ++||++.+.........+....+...++++++.
T Consensus 167 ~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~~ 238 (241)
T 3ncl_A 167 PQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKEN 238 (241)
T ss_dssp TTTCCTTEEEEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHH
T ss_pred ccCCCCCeEEeCCCCCCCccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 222222345542 36789999999983 3554 899999864322222334455556666666553
No 78
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.39 E-value=4.6e-12 Score=125.47 Aligned_cols=173 Identities=16% Similarity=0.094 Sum_probs=108.1
Q ss_pred cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC-----CcEEEEEEEEecc-------CCCeEEEEeccccccCCeee
Q 007213 147 YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS-----DTKYLATVLAIGT-------ECDIAMLTVEDDEFWEGVLP 214 (612)
Q Consensus 147 ~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~-----g~~~~a~vv~~d~-------~~DLAlLkv~~~~~~~~l~p 214 (612)
....|+|.+|++.||||+|||+.+...+.|.+... ...+..+-+..++ .+|||||++++..+.+.+.|
T Consensus 26 ~~~~CgGtLIs~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~v~p 105 (230)
T 2hlc_A 26 RRVWCGGSLIDNKWILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIPHVEYTDNIQP 105 (230)
T ss_dssp CEEEEEEEEEETTEEEECHHHHTTEEEEEEEESCSBTTCCSEEEECSEEEECTTCBTTTTBTCCEEEECSCCCCCSSCCC
T ss_pred CCEEEEEEEeeCCEEEECHHHCCCCcceEEEEeeeecCCCCeEEEEEEEEECCCCCCCCccccEEEEEecCCCcCCcEee
Confidence 34689999999999999999999877788887421 1233333333333 47999999984445567899
Q ss_pred eEcCCCC-----CCCCeEEEEEeCCCCC----ceeEEEEEEeceeeecccCC-ceeeeEEEEc----cCCCCCCCCCeEe
Q 007213 215 VEFGELP-----ALQDAVTVVGYPIGGD----TISVTSGVVSRIEILSYVHG-STELLGLQID----AAINSGNSGGPAF 280 (612)
Q Consensus 215 l~l~~~~-----~~G~~V~aiG~p~g~~----~~sv~~GiIs~~~~~~~~~~-~~~~~~i~~d----a~i~~G~SGGPlv 280 (612)
+.|.... ..+..+++.||..... ...+..-+++...|...... .....+++.. ...|.|+|||||+
T Consensus 106 icLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPl~ 185 (230)
T 2hlc_A 106 IRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPFV 185 (230)
T ss_dssp CBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEEE
T ss_pred eEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCcccCCeEEecCCCCCCcCCCCCCCeeE
Confidence 9997632 3578899999875432 12233344454444322111 1112345543 3678999999999
Q ss_pred cC-CCeEEEEEecccCCC-ccceeecccChhhHHHHHHHHH
Q 007213 281 ND-KGKCVGIAFQSLKHE-DVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 281 n~-~G~VIGI~~~~~~~~-~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
.. ++.++||++...... .....+....+.....++++..
T Consensus 186 ~~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 226 (230)
T 2hlc_A 186 LSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQNT 226 (230)
T ss_dssp EGGGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHHH
T ss_pred ECcCCEEEEEEEEeCCCCCCCCCCCEEEEhHHhHHHHHHhh
Confidence 65 469999999754111 1122233455566666665543
No 79
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.38 E-value=7.6e-12 Score=123.37 Aligned_cols=181 Identities=17% Similarity=0.164 Sum_probs=113.1
Q ss_pred CCCCCCcccccCC--cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC-----CCcEEEEEEEEecc-------CC
Q 007213 134 EPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG-----SDTKYLATVLAIGT-------EC 196 (612)
Q Consensus 134 ~~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~-----~g~~~~a~vv~~d~-------~~ 196 (612)
.....+||+.... ....|+|.+|++.||||+|||+.+. ..+.|.+.. +++.+..+-+..++ .+
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~ 86 (222)
T 1eq9_A 7 APVGKYPYQVSLRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRN 86 (222)
T ss_dssp CCTTSCTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTTBC
T ss_pred CCCCCcceEEEEEeCCCeEEEEEEeeCCEEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCCCCCCC
Confidence 3445667765322 3468999999999999999999763 467777732 23445555455544 47
Q ss_pred CeEEEEeccc-cccCCeeeeEcCCCC--CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCCceeeeEEEE
Q 007213 197 DIAMLTVEDD-EFWEGVLPVEFGELP--ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTELLGLQI 266 (612)
Q Consensus 197 DLAlLkv~~~-~~~~~l~pl~l~~~~--~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~~~~~~~i~~ 266 (612)
|||||+++.+ .+.+.+.|+.|.... ..|..+++.||..... ...+..-+++...|...... ....+++.
T Consensus 87 DIALl~L~~~v~~~~~v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~Ca 165 (222)
T 1eq9_A 87 DVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR-VIDSHICT 165 (222)
T ss_dssp CCEEEEESSCCCCBTTBCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS-CCTTEEEE
T ss_pred CEEEEEECCccccCCceEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC-CCccEEee
Confidence 9999999875 345568999998643 4588899999865321 11233334444344311111 11134554
Q ss_pred c----cCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHH
Q 007213 267 D----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (612)
Q Consensus 267 d----a~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~ 317 (612)
. ...|.|+|||||+. +|.++||++.+..... ...+....+...+.++++
T Consensus 166 ~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~C~~-~~p~vyt~V~~~~~WI~~ 218 (222)
T 1eq9_A 166 LTKRGEGACHGDSGGPLVA-NGAQIGIVSFGSPCAL-GEPDVYTRVSSFVSWINA 218 (222)
T ss_dssp CCCTTCBCCTTCTTCEEEE-TTEEEEEEEECSTTTS-SSCEEEEEGGGGHHHHHH
T ss_pred cCCCCCeeeeCCccceEEE-CCEEEEEEEECCCcCC-CCCCEEEEHHHHHHHHHH
Confidence 2 35789999999996 5899999998543221 223444555555555554
No 80
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.38 E-value=2e-11 Score=120.39 Aligned_cols=167 Identities=18% Similarity=0.157 Sum_probs=105.9
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEeccC-------CCeEEEEeccc-cccCC
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGTE-------CDIAMLTVEDD-EFWEG 211 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~~-------~DLAlLkv~~~-~~~~~ 211 (612)
...|+|.+|++.||||+|||+. ..+.|.+... .+.+...-+..++. +||||||++.+ .+...
T Consensus 27 ~~~CgGtLI~~~~VLTAAhC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (226)
T 4ag1_A 27 SKFCGGFLIRRNFVLTAAHCAG--RSITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLA 104 (226)
T ss_dssp CEEEEEEEEETTEEEECGGGCC--SEEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSS
T ss_pred ccEEEEEEEeCCEEEECcccCC--CCeEEEeCCcccCCCCCcceEEEEEEEEeCCCCCCCCCcCcEEEEEECCCCccCCc
Confidence 4679999999999999999995 4566776321 13344444455553 69999999865 34456
Q ss_pred eeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCCceeeeEEEEc-----cCCCCCCCC
Q 007213 212 VLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTELLGLQID-----AAINSGNSG 276 (612)
Q Consensus 212 l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~~~~~~~i~~d-----a~i~~G~SG 276 (612)
+.|+.|.... ..|+.+++.||..... ...+..-+++...|..... ......+++. ...|.|+||
T Consensus 105 v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~-~~~~~~~Ca~~~~~~~~~C~GDsG 183 (226)
T 4ag1_A 105 VGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRD-FDHNLQLCVGNPRKTKSAFKGDSG 183 (226)
T ss_dssp SCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTT-CCTTTEEEESCTTSCCBCCTTCTT
T ss_pred eeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccC-cCccceEeeccCCCCCcCccCCCC
Confidence 7788887532 4589999999864321 1233444555545542111 1111245542 357889999
Q ss_pred CeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 277 GPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 277 GPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
|||+. ++.++||++.+.... ...+....+...+.++++..+
T Consensus 184 gPl~~-~~~l~Gi~S~g~~c~--~~p~vyt~v~~~~~WI~~~i~ 224 (226)
T 4ag1_A 184 GPLLC-AGVAQGIVSYGRSDA--KPPAVFTRISHYRPWINQILQ 224 (226)
T ss_dssp CEEEE-TTEEEEEEEECBTTC--CSCEEEEEHHHHHHHHHHHHH
T ss_pred CceEE-cCEEEEEEEECCCCC--CCCCEEEEhHHHHHHHHHHHh
Confidence 99996 689999999865322 124455666666777766543
No 81
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.38 E-value=9.7e-12 Score=123.54 Aligned_cols=183 Identities=16% Similarity=0.117 Sum_probs=110.1
Q ss_pred CCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc-------CCC
Q 007213 135 PNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT-------ECD 197 (612)
Q Consensus 135 ~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~-------~~D 197 (612)
....+||.... .....|+|.+|++.||||+|||+.+ ..+.|.+... .+.+..+-+..++ .+|
T Consensus 8 ~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~D 86 (234)
T 1orf_A 8 TPHSRPYMVLLSLDRKTICAGALIAKDWVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGD 86 (234)
T ss_dssp CTTSSTTEEEEECSSSCEEEEEEEETTEEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTCTTC
T ss_pred CCCCCCeEEEEccCCceEEEEEEeeCCEEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCCCCC
Confidence 34456776432 2346899999999999999999975 3456665321 1334444444443 469
Q ss_pred eEEEEecccc-ccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeec--ccC-Cc-eeee
Q 007213 198 IAMLTVEDDE-FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILS--YVH-GS-TELL 262 (612)
Q Consensus 198 LAlLkv~~~~-~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~--~~~-~~-~~~~ 262 (612)
||||+++.+. +...+.|+.|.... ..|+.+++.||..... ...+..-+++...|.. ... .. ....
T Consensus 87 IALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 166 (234)
T 1orf_A 87 LKLLQLTEKAKINKYVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMN 166 (234)
T ss_dssp CEEEEESSCCCCSSSSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCCCTT
T ss_pred EEEEEECCcCccCCCeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccCCccCCC
Confidence 9999998653 45568888887533 4588999999864321 1123344455444431 110 00 0013
Q ss_pred EEEEc-----cCCCCCCCCCeEecCCCeEEEEEeccc--CCCccceeecccChh-hHHHHHHHHH
Q 007213 263 GLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSL--KHEDVENIGYVIPTP-VIMHFIQDYE 319 (612)
Q Consensus 263 ~i~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~--~~~~~~~~~~aIPi~-~i~~~l~~l~ 319 (612)
+++.. ...|.|+|||||+. +|.++||++.+. ........+...-+. ..+.++++..
T Consensus 167 ~~Ca~~~~~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~ 230 (234)
T 1orf_A 167 MVCAGSLRGGRDSCNGDSGSPLLC-EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230 (234)
T ss_dssp EEEEECSSCCCBCCTTCTTCEEEE-TTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHH
T ss_pred EEEecCCCCCCcCCCCCCCCeEEE-CCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHH
Confidence 45543 35789999999997 689999999854 221112233344444 4555555543
No 82
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.38 E-value=1e-11 Score=123.52 Aligned_cols=182 Identities=13% Similarity=0.096 Sum_probs=111.7
Q ss_pred CCcccccCC---cceEEEEEEEeCCEEEecccccCC----CCeEEEEEcCC----------CcEEEEEEEEecc-CCCeE
Q 007213 138 SLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEH----YTQVKLKKRGS----------DTKYLATVLAIGT-ECDIA 199 (612)
Q Consensus 138 ~~p~~~~~~---~~~~GSGfiI~~g~ILT~aHvV~~----~~~i~V~~~~~----------g~~~~a~vv~~d~-~~DLA 199 (612)
.+||..... ....|+|.+|++.||||+|||+.+ ...+.|.+... .+.+...-+..++ .+|||
T Consensus 8 ~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiA 87 (234)
T 2asu_B 8 NSPWTVSLRNRQGQHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLV 87 (234)
T ss_dssp CCTTEEEEECTTSCEEEEEEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEE
T ss_pred CCcceEEeeccCCCEEEEEEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeE
Confidence 356664321 346899999999999999999964 34567776311 1234433334444 58999
Q ss_pred EEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC------ceeEEEEEEeceeeecccCCceeeeEEEEc--
Q 007213 200 MLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHGSTELLGLQID-- 267 (612)
Q Consensus 200 lLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~~~~~~~~~~~~i~~d-- 267 (612)
||+++.+ .+...+.|+.|.... ..|+.+++.||..... ...+..-+++...|...........++++.
T Consensus 88 Ll~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 167 (234)
T 2asu_B 88 LLKLERSVTLNQRVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGL 167 (234)
T ss_dssp EEEESSCCCCSSSSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTCCCTTEEEECCC
T ss_pred EEEeCCcCcCCCcEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCccCcceEeecCC
Confidence 9999875 345578899997632 3588999999865321 112334445544443322111122345552
Q ss_pred ---cCCCCCCCCCeEecCC-C--eEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 268 ---AAINSGNSGGPAFNDK-G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 268 ---a~i~~G~SGGPlvn~~-G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
...|.|+|||||+... | .++||++.+.........+....+...+.++++..
T Consensus 168 ~~~~~~C~GDSGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 225 (234)
T 2asu_B 168 LAPVGACEGDYGGPLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVM 225 (234)
T ss_dssp SSCCBCCTTCTTCEEEEEETTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHHC
T ss_pred CCCCeeccCCCCCceEEEECCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 3578999999999653 3 79999987543222223344555566666665543
No 83
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.38 E-value=1.3e-11 Score=121.47 Aligned_cols=182 Identities=18% Similarity=0.128 Sum_probs=111.1
Q ss_pred eCCCCCCcccccCCcceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC------CCcEEEEEEEEecc-------CC
Q 007213 133 TEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG------SDTKYLATVLAIGT-------EC 196 (612)
Q Consensus 133 ~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~------~g~~~~a~vv~~d~-------~~ 196 (612)
......+||..... ..|+|.+|++.||||+|||+.+. ..+.|.+.. +...+...-+..++ .+
T Consensus 6 ~a~~~~~Pw~v~l~--~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~ 83 (224)
T 3beu_A 6 RAAQGEFPFMVRLS--MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGK 83 (224)
T ss_dssp ECCTTTSTTEEEET--TTEEEEEEETTEEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSC
T ss_pred ECCCCCCCEEEEEC--CceeEEEeeCCEEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCC
Confidence 34455788887543 36999999999999999999864 356676631 12344444444444 35
Q ss_pred CeEEEEeccccccCCeeeeEcCCCC-CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccC-CceeeeEEEEc
Q 007213 197 DIAMLTVEDDEFWEGVLPVEFGELP-ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVH-GSTELLGLQID 267 (612)
Q Consensus 197 DLAlLkv~~~~~~~~l~pl~l~~~~-~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~-~~~~~~~i~~d 267 (612)
|||||+++.+. .++++.+.... ..+..+++.||..... ...+..-+++...|..... ......+++..
T Consensus 84 DIALl~L~~~v---~~~~i~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~ 160 (224)
T 3beu_A 84 DWALIKLAQPI---NQPTLKIATTTAYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAG 160 (224)
T ss_dssp CCEEEEESSCC---CSCCCEECCSSTTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEEEC
T ss_pred CEEEEEeCCCC---CCCccccccccccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEEec
Confidence 99999998764 45677776533 3366899999865321 1123344444444432211 11112345552
Q ss_pred -----cCCCCCCCCCeEecCC--C--eEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 268 -----AAINSGNSGGPAFNDK--G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 268 -----a~i~~G~SGGPlvn~~--G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
...|.|+|||||+..+ | .++||++.+.........+....+.....++++..
T Consensus 161 ~~~~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 221 (224)
T 3beu_A 161 YDTKQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAA 221 (224)
T ss_dssp CSSSSCBCCTTCTTCEEEEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHHHHHHHHH
T ss_pred cCCCCCcCCCCcCCCeeEEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 3678999999999653 3 68999998643222223344555666666665543
No 84
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.37 E-value=3.8e-12 Score=124.80 Aligned_cols=158 Identities=20% Similarity=0.201 Sum_probs=102.9
Q ss_pred ceEEEEEEEeCCEEEecccccCCC--CeE----EEEEcC-----CCcEEEEEEEEec--------cCCCeEEEEeccccc
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHY--TQV----KLKKRG-----SDTKYLATVLAIG--------TECDIAMLTVEDDEF 208 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~--~~i----~V~~~~-----~g~~~~a~vv~~d--------~~~DLAlLkv~~~~~ 208 (612)
...|+|++|++.||||+|||+.+. ..+ .|.+.. .+..+..+-+..+ ..+|||||+++.+ +
T Consensus 29 ~~~CgGtLIs~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~-~ 107 (215)
T 1p3c_A 29 GSSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTN-I 107 (215)
T ss_dssp SCEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSC-H
T ss_pred CceEEEEEEeCCEEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCC-C
Confidence 358999999999999999999643 344 676632 1223444444443 3569999999874 4
Q ss_pred cCCeeeeEcCCC-CCCCCeEEEEEeCCCC------CceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEec
Q 007213 209 WEGVLPVEFGEL-PALQDAVTVVGYPIGG------DTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFN 281 (612)
Q Consensus 209 ~~~l~pl~l~~~-~~~G~~V~aiG~p~g~------~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn 281 (612)
...+.|+.|... ...|+.++++||+... ....+...+++...+.. .......|.|+|||||+.
T Consensus 108 ~~~v~pi~l~~~~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~~c~~----------~~~~~~~C~GDSGgPl~~ 177 (215)
T 1p3c_A 108 GNTVGYRSIRQVTNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDTNL----------AYYTIDTFSGNSGSAMLD 177 (215)
T ss_dssp HHHHCCCCBCCCSCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEECSSE----------EEECCCCCTTCTTCEEEC
T ss_pred cccceeeecCCCcccCCCeEEEecCCCCCcccccceechhccCccCcccchh----------eeeccccCCCCCCCeeEc
Confidence 446888888763 3568999999997421 11133344443333321 113567899999999998
Q ss_pred CCCeEEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 282 DKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 282 ~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
.+|.++||++.+.... ...+...-+.....++++.
T Consensus 178 ~~g~lvGi~S~g~~c~--~~p~v~t~v~~~~~WI~~~ 212 (215)
T 1p3c_A 178 QNQQIVGVHNAGYSNG--TINGGPKATAAFVEFINYA 212 (215)
T ss_dssp TTSCEEEECCEEEGGG--TEEEEEBCCHHHHHHHHHH
T ss_pred cCCeEEEEEecccCCC--ccCceeEechHHHHHHHHH
Confidence 7899999998754321 2233344556666666554
No 85
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.37 E-value=1.5e-11 Score=122.82 Aligned_cols=186 Identities=18% Similarity=0.171 Sum_probs=113.2
Q ss_pred CCCCCcccccCC--cceEEEEEEEeCCEEEecccccCCCC-eEEEEEcC-----CCcEEEEEEEEec--------cCCCe
Q 007213 135 PNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYT-QVKLKKRG-----SDTKYLATVLAIG--------TECDI 198 (612)
Q Consensus 135 ~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~~-~i~V~~~~-----~g~~~~a~vv~~d--------~~~DL 198 (612)
....+||..... ....|+|.+|++.||||+|||+.+.. .+.|.+.. .+..+..+-+..+ ..+||
T Consensus 8 ~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DI 87 (240)
T 2zgc_A 8 IPHSRPYMASLQRNGSHLCGGVLVHPKWVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDL 87 (240)
T ss_dssp CTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBSCC
T ss_pred CCCCcCcEEEEEeCCCeEEEEEEEcCCEEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcccE
Confidence 334566664322 34689999999999999999998653 57777632 1234444433333 34799
Q ss_pred EEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeec--ccCCceeeeEEE
Q 007213 199 AMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILS--YVHGSTELLGLQ 265 (612)
Q Consensus 199 AlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~--~~~~~~~~~~i~ 265 (612)
||||++.+ .+...+.|+.|.... ..|+.+++.||..... ...+..-+++...|.. .........+++
T Consensus 88 ALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~C 167 (240)
T 2zgc_A 88 ALLQLDGKVKPSRTIRPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVC 167 (240)
T ss_dssp EEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCTTEEE
T ss_pred EEEEeCCcccCCCceeeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCCCCceEe
Confidence 99999865 344568899987633 4589999999864321 1122333444434432 111111123455
Q ss_pred Ec-----cCCCCCCCCCeEecCC-CeEEEEEeccc-CCCccceeecccChhhHHHHHHHHHH
Q 007213 266 ID-----AAINSGNSGGPAFNDK-GKCVGIAFQSL-KHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 266 ~d-----a~i~~G~SGGPlvn~~-G~VIGI~~~~~-~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
+. ...|.|+|||||+..+ ..++||++.+. ........+....+...+.++++..+
T Consensus 168 a~~~~~~~~~C~GDSGgPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 229 (240)
T 2zgc_A 168 LAADSKDQAPCKGDSGGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTG 229 (240)
T ss_dssp EECSSTTCBCCTTCTTCEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHC
T ss_pred eccCCCCCccCCCCccCeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 42 3578999999999652 38999998752 11111223445566666777766553
No 86
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.37 E-value=8.5e-12 Score=124.06 Aligned_cols=169 Identities=14% Similarity=0.126 Sum_probs=105.4
Q ss_pred eEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc---------CCCeEEEEeccc-cccC
Q 007213 149 SSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT---------ECDIAMLTVEDD-EFWE 210 (612)
Q Consensus 149 ~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~---------~~DLAlLkv~~~-~~~~ 210 (612)
..|+|.+|++.||||+|||+.+...+.|.+... .+.+..+-+..++ .+|||||+++.+ .+..
T Consensus 28 ~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~~~~~~ 107 (236)
T 1elt_A 28 HTCGGSLIRQGWVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNS 107 (236)
T ss_dssp EEEEEEEEETTEEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCSS
T ss_pred eEEEEEEEeCCEEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEECCCCCccCC
Confidence 579999999999999999998877888887421 2234444444443 569999999865 3455
Q ss_pred CeeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeeccc-CC-ceeeeEEEEc---cCCCCCCC
Q 007213 211 GVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYV-HG-STELLGLQID---AAINSGNS 275 (612)
Q Consensus 211 ~l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~-~~-~~~~~~i~~d---a~i~~G~S 275 (612)
.+.|+.|.... ..|+.+++.||..... ...+..-+++...|.... .+ .....+++.. ...|.|+|
T Consensus 108 ~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GDS 187 (236)
T 1elt_A 108 AVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAGGGANSGCNGDS 187 (236)
T ss_dssp SCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTTTTGGGSCTTEEEECCSSCBCCTTCT
T ss_pred cEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhccccccCCcCCcceEEecCCCCccCCCCC
Confidence 68899887632 3588999999875321 112223344443443210 11 1112345553 45789999
Q ss_pred CCeEecC-CC--eEEEEEeccc--CCCccceeecccChhhHHHHHHH
Q 007213 276 GGPAFND-KG--KCVGIAFQSL--KHEDVENIGYVIPTPVIMHFIQD 317 (612)
Q Consensus 276 GGPlvn~-~G--~VIGI~~~~~--~~~~~~~~~~aIPi~~i~~~l~~ 317 (612)
||||+.. +| .++||++... ........+...-+...+.++++
T Consensus 188 GgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 234 (236)
T 1elt_A 188 GGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNG 234 (236)
T ss_dssp TCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHH
T ss_pred CCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHh
Confidence 9999965 57 7999999753 11111223344455555555543
No 87
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.37 E-value=6.4e-12 Score=125.34 Aligned_cols=187 Identities=18% Similarity=0.157 Sum_probs=117.3
Q ss_pred CCCCCCcccccC---CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc-------C
Q 007213 134 EPNFSLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT-------E 195 (612)
Q Consensus 134 ~~~~~~p~~~~~---~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~-------~ 195 (612)
.....+||.... .....|+|.+|++.||||+|||+.+...+.|.+... ...+..+.+..++ .
T Consensus 7 a~~~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 86 (241)
T 2jkh_A 7 CKDGECPWQALLINEENEGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYD 86 (241)
T ss_dssp CCTTSSTTEEEEECTTSCEEEEEEECSSSEEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTTTB
T ss_pred CCCCCcCcEEEEEcCCCCcEEEEEEeeCCEEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCCCC
Confidence 344567776532 234689999999999999999998777778877421 2234444444443 4
Q ss_pred CCeEEEEeccc-cccCCeeeeEcCCC------CCCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCCceee
Q 007213 196 CDIAMLTVEDD-EFWEGVLPVEFGEL------PALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTEL 261 (612)
Q Consensus 196 ~DLAlLkv~~~-~~~~~l~pl~l~~~------~~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~~~~~ 261 (612)
+|||||+++.+ .+...+.|+.|... ...+..+++.||..... ...+..-+++...|..........
T Consensus 87 ~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~ 166 (241)
T 2jkh_A 87 FDIAVLRLKTPITFRMNVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSFIITQ 166 (241)
T ss_dssp TCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHCSSCCCT
T ss_pred CcEEEEEECCcccCCCCEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhcccccCcCCC
Confidence 69999999865 34556889998752 23478899999864321 112333444444443221111112
Q ss_pred eEEEEc-----cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 262 LGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 262 ~~i~~d-----a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
.+++.. ...|.|+|||||+.. +| .++||++.+.........+....+...+.++++..+
T Consensus 167 ~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 233 (241)
T 2jkh_A 167 NMFCAGYDTKQEDACQGDSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK 233 (241)
T ss_dssp TEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHTC
T ss_pred CeEEeeCCCCCCccCcCcCCCeeEEEECCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHhc
Confidence 345552 357899999999965 45 599999986532222234555666777777766543
No 88
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.37 E-value=6.1e-13 Score=117.29 Aligned_cols=97 Identities=20% Similarity=0.358 Sum_probs=82.4
Q ss_pred CcccCCCcCCeEEeeecChhhHHhhhccc-----CCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccC
Q 007213 322 GAYTGFPLLGVEWQKMENPDLRVAMSMKA-----DQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHG 395 (612)
Q Consensus 322 g~v~~~~~lGi~~~~~~~~~~~~~lgl~~-----~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~ 395 (612)
|++. |+|||+.++.+ ++++++.++++. ...|++|..|.++|||++ ||++||+|++|||+++.++.++
T Consensus 1 G~v~-~~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~----- 73 (112)
T 2p3w_A 1 GSHM-KRFIGIRMRTI-TPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSEL----- 73 (112)
T ss_dssp CCCC-EEECCEEEEEC-CHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHH-----
T ss_pred CCcc-cceeeEEEecC-CHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHH-----
Confidence 4566 89999999999 899999998853 257999999999999999 9999999999999999998774
Q ss_pred ccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEeccC
Q 007213 396 ERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLATH 433 (612)
Q Consensus 396 ~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~~~ 433 (612)
...+ ..|+.+.|+|.|+|+.+++++++...
T Consensus 74 -----~~~l---~~g~~v~l~v~R~g~~~~~~v~~~~~ 103 (112)
T 2p3w_A 74 -----QEAV---LTESPLLLEVRRGNDDLLFSIAPEVV 103 (112)
T ss_dssp -----HHHH---HHCSSEEEEEEETTEEEEEEECCEEE
T ss_pred -----HHHH---hCCCeEEEEEEECCEEEEEEEEEeee
Confidence 2444 24788999999999998888877654
No 89
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.37 E-value=1.2e-11 Score=122.27 Aligned_cols=179 Identities=18% Similarity=0.171 Sum_probs=107.1
Q ss_pred CCCCCcccccCC-----cceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------
Q 007213 135 PNFSLPWQRKRQ-----YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT------- 194 (612)
Q Consensus 135 ~~~~~p~~~~~~-----~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~------- 194 (612)
....+||..... ....|+|.+|++.||||+|||+.+ .+.|.+.. ....+..+-+..++
T Consensus 8 ~~~~~Pw~v~l~~~~~~~~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~ 85 (227)
T 1euf_A 8 KPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETL 85 (227)
T ss_dssp CTTSCTTEEEEEEESSSSEEEEEEEEEETTEEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTC
T ss_pred CCCCcCCEEEEEEeCCCCceEEEEEEeeCCEEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCCCC
Confidence 334556654321 146899999999999999999975 56666631 12334444444444
Q ss_pred CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCCceeeeE
Q 007213 195 ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTELLG 263 (612)
Q Consensus 195 ~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~~~~~~~ 263 (612)
.+|||||+++.+ .+...+.|+.|.... ..|+.+++.||..... ...+..-+++...|............
T Consensus 86 ~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~ 165 (227)
T 1euf_A 86 ANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQ 165 (227)
T ss_dssp TTCCEEEEESSCCCCCSSCCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTTCCTTTE
T ss_pred cCceEEEEECCcCcCCCceeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcCcCCCcE
Confidence 469999999865 345568899997632 4588999999864321 11223333333334322111111234
Q ss_pred EEEc-----cCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 264 LQID-----AAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 264 i~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
++.. ...+.|+|||||+. +|.++||++.+-. ....-+...-+...+.++++.
T Consensus 166 ~Ca~~~~~~~~~~~GDsGgPL~~-~~~l~Gi~S~gc~--~~~~p~vyt~V~~y~~WI~~~ 222 (227)
T 1euf_A 166 ICAGDPSKRKNSFSGDSGGPLVC-NGVAQGIVSYGRN--DGTTPDVYTRISSFLSWIHST 222 (227)
T ss_dssp EEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECCT--TCCSCEEEEEGGGTHHHHHHH
T ss_pred EEccCCCCCCcccccCCCCceEE-CCEEEEEEEEeCC--CCCCCeEEEEHHHhHHHHHHH
Confidence 6653 23448999999996 6899999997521 112233444555555555543
No 90
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.36 E-value=1.3e-11 Score=123.61 Aligned_cols=191 Identities=18% Similarity=0.171 Sum_probs=115.4
Q ss_pred eeeeCCCCCCcccccC---CcceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCC--------CcEEEEEEEEecc-
Q 007213 130 CVHTEPNFSLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGS--------DTKYLATVLAIGT- 194 (612)
Q Consensus 130 ~~~~~~~~~~p~~~~~---~~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~~--------g~~~~a~vv~~d~- 194 (612)
.........+||.... .....|+|.+|++.||||+|||+.+. ..+.|.+... .+.+...-++.++
T Consensus 20 gG~~a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~ 99 (247)
T 1ddj_A 20 GGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPT 99 (247)
T ss_dssp TCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEECTT
T ss_pred CCEECCCCCCCcEEEEEcCCCCeEEEEEEeeCCEEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEcCCC
Confidence 3333444456665432 13468999999999999999999754 3466776321 1233333334443
Q ss_pred CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC------ceeEEEEEEeceeeeccc--CCceeee
Q 007213 195 ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYV--HGSTELL 262 (612)
Q Consensus 195 ~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~~~~--~~~~~~~ 262 (612)
.+||||||++.+ .+.+.+.|+.|.... ..+..+++.||..... ...+..-+++...|.... .......
T Consensus 100 ~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~ 179 (247)
T 1ddj_A 100 RKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQST 179 (247)
T ss_dssp SCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTCCCTT
T ss_pred CCcEEEEEeCCceeeCCCEEeeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCCCcCC
Confidence 589999999875 345578898887532 3478899999875321 123344455555554321 1111223
Q ss_pred EEEEc-----cCCCCCCCCCeEecCC-C--eEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 263 GLQID-----AAINSGNSGGPAFNDK-G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 263 ~i~~d-----a~i~~G~SGGPlvn~~-G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
+++.. ...|.|+|||||+..+ | .++||++.+.........+...-+.....++++..+
T Consensus 180 ~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 245 (247)
T 1ddj_A 180 ELCAGHLAGGTDSCQGDAGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR 245 (247)
T ss_dssp EEEESCSSSCCCBCCSCTTCEEEEECSSSEEEEEEECGGGCCBBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred eEeecCCCCCCccccCcCcCcEEEEECCcEEEEEEEEECCCCCCCCCCEEEEEhHHhHHHHHHHhh
Confidence 45553 3578999999999653 3 699999986532222223444555666666665543
No 91
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.36 E-value=7.6e-12 Score=124.25 Aligned_cols=187 Identities=17% Similarity=0.166 Sum_probs=114.1
Q ss_pred eCCCCCCcccccCCcceEEEEEEEeCCEEEecccccCC----CCeEEEEEcCC------CcEEEEEEEEecc--------
Q 007213 133 TEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEH----YTQVKLKKRGS------DTKYLATVLAIGT-------- 194 (612)
Q Consensus 133 ~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~----~~~i~V~~~~~------g~~~~a~vv~~d~-------- 194 (612)
......+||.........|+|.+|++.||||+|||+.+ ...+.|.+... ...+..+-+..++
T Consensus 6 ~a~~~~~Pw~v~l~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~ 85 (242)
T 3tvj_B 6 KAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGF 85 (242)
T ss_dssp ECCTTSSTTEEEEESSEEEEEEEETTTEEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCS
T ss_pred eCCCCCCCCEEEEecCCcEEEEEecCCEEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCCCCCC
Confidence 34455678886654567899999999999999999953 45677776321 1233333344433
Q ss_pred CCCeEEEEeccc-cccCCeeeeEcCCCC-----CCCCeEEEEEeCCCCC------ceeEEEEEEeceeeecccCC-----
Q 007213 195 ECDIAMLTVEDD-EFWEGVLPVEFGELP-----ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHG----- 257 (612)
Q Consensus 195 ~~DLAlLkv~~~-~~~~~l~pl~l~~~~-----~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~~~~~~----- 257 (612)
.+|||||+++.+ .+...+.|+.|.... ..|+.+++.||..... ...+..-+++...|......
T Consensus 86 ~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~ 165 (242)
T 3tvj_B 86 DNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPR 165 (242)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHHHHHSTTSCT
T ss_pred cCcEEEEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHHhhccCCccc
Confidence 469999999865 345678999997632 4588999999865421 11223333333333321110
Q ss_pred -ceeeeEEEEc-----cCCCCCCCCCeEecC---CC--eEEEEEecc-cCCCccceeecccChhhHHHHHHHHH
Q 007213 258 -STELLGLQID-----AAINSGNSGGPAFND---KG--KCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 258 -~~~~~~i~~d-----a~i~~G~SGGPlvn~---~G--~VIGI~~~~-~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
.....++++. ...|.|+|||||+.. +| .++||++.+ .........+....+...+.++++..
T Consensus 166 ~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i 239 (242)
T 3tvj_B 166 GSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 239 (242)
T ss_dssp TCCCTTEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred ccccCCeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 1122346652 467899999999863 33 499999875 22211222344555566666665543
No 92
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.36 E-value=1.6e-11 Score=121.94 Aligned_cols=185 Identities=17% Similarity=0.135 Sum_probs=113.3
Q ss_pred CCCCCcccccCC----cceEEEEEEEeCCEEEecccccCCC--CeEEEEEcCC--------CcEEEEEEEEecc------
Q 007213 135 PNFSLPWQRKRQ----YSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRGS--------DTKYLATVLAIGT------ 194 (612)
Q Consensus 135 ~~~~~p~~~~~~----~~~~GSGfiI~~g~ILT~aHvV~~~--~~i~V~~~~~--------g~~~~a~vv~~d~------ 194 (612)
....+||..... ....|+|.+|++.||||+|||+.+. ..+.|.+... .+.+..+-+..++
T Consensus 8 ~~~~~Pw~v~l~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~ 87 (238)
T 1ym0_A 8 RPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPAT 87 (238)
T ss_dssp CTTSSTTEEEEEEGGGTEEEEEEEEEETTEEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCTTT
T ss_pred CCCccCCEEEEEeCCCCceEEEEEEeeCCEEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECCCCCCCC
Confidence 334566664321 2468999999999999999999864 5677777321 2344444444443
Q ss_pred -CCCeEEEEeccc-cccCCeeeeEcCCCC--CCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccCC-ceee
Q 007213 195 -ECDIAMLTVEDD-EFWEGVLPVEFGELP--ALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVHG-STEL 261 (612)
Q Consensus 195 -~~DLAlLkv~~~-~~~~~l~pl~l~~~~--~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~~-~~~~ 261 (612)
.+|||||+++.+ .+...+.|+.|.... ..++.+++.||..... ...+..-+++...|...... ....
T Consensus 88 ~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~ 167 (238)
T 1ym0_A 88 LENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTIYD 167 (238)
T ss_dssp CTTCCEEEEESSCCCCSSSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCTTSCCCT
T ss_pred CcccEEEEEeCCCccccCcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhcccccCC
Confidence 469999999865 344568899997633 2588999999865321 11223333443334322111 1112
Q ss_pred eEEEEc-------cCCCCCCCCCeEecCC--C--eEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 262 LGLQID-------AAINSGNSGGPAFNDK--G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 262 ~~i~~d-------a~i~~G~SGGPlvn~~--G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
.+++.. ...|.|+|||||+..+ | .++||++.+.... ....+....+...+.++++..+
T Consensus 168 ~~~Ca~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~-~~~p~vyt~v~~~~~WI~~~i~ 236 (238)
T 1ym0_A 168 DMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCA-SGYPGVYSRVGFHAGWITDTIT 236 (238)
T ss_dssp TEEEEECSSCSSSCBCCTTTTTCEEEEECTTCCEEEEEEEEECSSSS-SSSCEEEEEHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCCcCccCCCccCCeeEEECCCCCEEEEEEEeECCCCC-CCCCcEEEEHHHhHHHHHHHhc
Confidence 345542 4678999999998653 4 6999999864322 2223444556666666665543
No 93
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.36 E-value=2.1e-11 Score=119.96 Aligned_cols=165 Identities=18% Similarity=0.182 Sum_probs=104.7
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEeccC-------CCeEEEEecccc-ccCC
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGTE-------CDIAMLTVEDDE-FWEG 211 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~~-------~DLAlLkv~~~~-~~~~ 211 (612)
...|+|.+|++.||||+|||+.. .+.|.+.. ....+..+-+..++. +|||||+++.+. +...
T Consensus 27 ~~~CgGtLI~~~~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (224)
T 3rp2_A 27 RVICGGFLISRQFVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPA 104 (224)
T ss_dssp EEEEEEEESSSSEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCSSSCCSCCEEEEESSCCCCBTT
T ss_pred EEEEEeEEeeCCEEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEECCCccCCCCCccEEEEEcCCCcccCCc
Confidence 45899999999999999999854 56666631 123344554555543 699999998653 4556
Q ss_pred eeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCCceeeeEEEEc-----cCCCCCCCC
Q 007213 212 VLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTELLGLQID-----AAINSGNSG 276 (612)
Q Consensus 212 l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~~~~~~~i~~d-----a~i~~G~SG 276 (612)
+.|+.|.... ..|..+++.||..... ...+...+++...|..... ......++.. ...|.|+||
T Consensus 105 v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~-~~~~~~~Ca~~~~~~~~~C~GDsG 183 (224)
T 3rp2_A 105 VNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRY-YEYKFQVCVGSPTTLRAAFMGDSG 183 (224)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTTC-CCTTTEEEECCTTSCCBCCTTTTT
T ss_pred ccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhccccc-cCcCCEEEecCCCCCCeeccCCCC
Confidence 8888887533 4589999999864211 1233444555444432111 1111234442 357889999
Q ss_pred CeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 277 GPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 277 GPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
|||+. ++.++||++.+.... ...+....+...+.++++.
T Consensus 184 gPl~~-~~~l~Gi~S~g~~c~--~~p~vyt~v~~y~~WI~~~ 222 (224)
T 3rp2_A 184 GPLLC-AGVAHGIVSYGHPDA--KPPAIFTRVSTYVPWINAV 222 (224)
T ss_dssp CEEEE-TTEEEEEEEECCTTC--CSCEEEEEHHHHHHHHHHH
T ss_pred CeEEE-cceeeEEEEECCCCC--CCCcEEEEHHHhHHHHHHH
Confidence 99997 589999999855321 1144455666666666554
No 94
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.35 E-value=1.7e-11 Score=122.23 Aligned_cols=186 Identities=19% Similarity=0.207 Sum_probs=114.0
Q ss_pred CCCCCcccccC-----CcceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEEEecc----
Q 007213 135 PNFSLPWQRKR-----QYSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVLAIGT---- 194 (612)
Q Consensus 135 ~~~~~p~~~~~-----~~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv~~d~---- 194 (612)
....+||.... .....|+|.+|++.||||+|||+.+. ..+.|.+.. ....+..+-+..++
T Consensus 8 ~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~ 87 (241)
T 2any_A 8 SWGEWPWQVSLQVKLTAQRHLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKV 87 (241)
T ss_dssp CTTSSTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEECTTCCT
T ss_pred CCCCCCcEEEEEEEcCCCceEEEEEEecCCEEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEECCCCCC
Confidence 34456666432 23467999999999999999999754 346666521 12233344444443
Q ss_pred ---CCCeEEEEeccc-cccCCeeeeEcCCC---CCCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCC-ce
Q 007213 195 ---ECDIAMLTVEDD-EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHG-ST 259 (612)
Q Consensus 195 ---~~DLAlLkv~~~-~~~~~l~pl~l~~~---~~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~-~~ 259 (612)
.+|||||+++.+ .+...+.|+.|... ...++.+++.||..... ...+..-+++...|...... ..
T Consensus 88 ~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~ 167 (241)
T 2any_A 88 SEGNHDIALIKLQAPLEYTEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDYKI 167 (241)
T ss_dssp TSSSSCCEEEEESSCCCCBTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTTSCTTCS
T ss_pred CCCCCCeEEEEeCCcccCCCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhHhccCCC
Confidence 469999999865 34556889888753 34589999999975321 11233444554444322111 11
Q ss_pred eeeEEEEc-----cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 260 ELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 260 ~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
...++++. ...|.|+|||||+.. +| .++||++.+.........+...-+...+.++++..+
T Consensus 168 ~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~ 236 (241)
T 2any_A 168 TQRMVCAGYKEGGKDACKGDSGGPLVCKHNGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKTQ 236 (241)
T ss_dssp CTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred CcCcEeecCCCCCCccCCCCCCCcEEEEECCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 12345552 357899999999965 45 699999986532222233445666666777766543
No 95
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.35 E-value=4.1e-12 Score=126.63 Aligned_cols=186 Identities=17% Similarity=0.189 Sum_probs=113.7
Q ss_pred eeCCCCCCcccccCCcceEEEEEEEeCCEEEecccccCC-------CCeEEEEEcCCC-------cEEEEEEEEecc---
Q 007213 132 HTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEH-------YTQVKLKKRGSD-------TKYLATVLAIGT--- 194 (612)
Q Consensus 132 ~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~-------~~~i~V~~~~~g-------~~~~a~vv~~d~--- 194 (612)
.......+||+........|+|.+|++.||||+|||+.. ...+.|.+.... ..+..+-+..++
T Consensus 5 ~~a~~~~~Pw~v~l~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~ 84 (242)
T 2qy0_B 5 QKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYR 84 (242)
T ss_dssp EECCTTSSTTEEEEESSSEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEEECTTCC
T ss_pred EECCCCCCCcEEEEccCCCEEEEEEeCCEEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEEECCCCc
Confidence 344456788887655456899999999999999999973 234667763211 123333333333
Q ss_pred -------CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCCc-----eeEEEEEEeceeeecccC--
Q 007213 195 -------ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-----ISVTSGVVSRIEILSYVH-- 256 (612)
Q Consensus 195 -------~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~~-----~sv~~GiIs~~~~~~~~~-- 256 (612)
.+|||||+++.+ .+...+.|+.|.... ..|..+++.||...... ..+..-+++...|.....
T Consensus 85 ~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~ 164 (242)
T 2qy0_B 85 QDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGK 164 (242)
T ss_dssp TTCSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHT
T ss_pred cCcCCCCCCcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccc
Confidence 359999999865 345578999998643 45889999998754321 122333333333332110
Q ss_pred ---CceeeeEEEEc-----cCCCCCCCCCeEecCCC-----eEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 257 ---GSTELLGLQID-----AAINSGNSGGPAFNDKG-----KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 257 ---~~~~~~~i~~d-----a~i~~G~SGGPlvn~~G-----~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
......++++. ...|.|+|||||+..++ .++||++.+..... +.+...-+...+.++++..
T Consensus 165 ~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~--~~~vyt~V~~y~~WI~~~~ 238 (242)
T 2qy0_B 165 NRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSR--GYGFYTKVLNYVDWIKKEM 238 (242)
T ss_dssp TCCCCCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSS--SCEEEEEGGGGHHHHHHHT
T ss_pred cccccCCCCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCC--CCcEEEEHHHHHHHHHHHh
Confidence 01112346652 35789999999996432 59999998653221 2355566666667766654
No 96
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.35 E-value=9e-12 Score=124.17 Aligned_cols=145 Identities=14% Similarity=0.167 Sum_probs=94.8
Q ss_pred ceEEEEEEEeCCEEEecccccCC--CCeEEEEEcC-------CCcEEEEEEEEeccC---------CCeEEEEeccc-cc
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEH--YTQVKLKKRG-------SDTKYLATVLAIGTE---------CDIAMLTVEDD-EF 208 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~--~~~i~V~~~~-------~g~~~~a~vv~~d~~---------~DLAlLkv~~~-~~ 208 (612)
...|+|.+|++.||||+|||+.+ ...+.|.+.. +.+.+..+-+..++. +|||||+++.+ .+
T Consensus 26 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~~ 105 (241)
T 1m9u_A 26 SHSCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISL 105 (241)
T ss_dssp EEEEEEEECSSSEEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCSSSTTTTCCEEEEESSCCCC
T ss_pred eeeeEEEEEeCCEEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCCCCcccccEEEEEecCcccc
Confidence 36899999999999999999986 3567777731 133455555555544 49999999865 34
Q ss_pred cCCeeeeEcCCC-C--CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccC--Cc--eeeeEEEEc-----cC
Q 007213 209 WEGVLPVEFGEL-P--ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVH--GS--TELLGLQID-----AA 269 (612)
Q Consensus 209 ~~~l~pl~l~~~-~--~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~--~~--~~~~~i~~d-----a~ 269 (612)
...+.|+.|... . ..|+.+++.||..... ...+..-+++...|..... .. ....++++. ..
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~ 185 (241)
T 1m9u_A 106 GGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTG 185 (241)
T ss_dssp CSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCB
T ss_pred CCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhhhcccCCCcccCCcEEECcCCCCCe
Confidence 556889988754 2 2588999999965321 1122233333333432111 11 112345553 35
Q ss_pred CCCCCCCCeEecCCC--eEEEEEec
Q 007213 270 INSGNSGGPAFNDKG--KCVGIAFQ 292 (612)
Q Consensus 270 i~~G~SGGPlvn~~G--~VIGI~~~ 292 (612)
.|.|+|||||+..+| .++||++.
T Consensus 186 ~C~GDSGgPL~~~~~~~~l~Gi~S~ 210 (241)
T 1m9u_A 186 ACNGDSGGPLNCPDGGTRVVGVTSW 210 (241)
T ss_dssp CCTTCTTCEEEEESSSEEEEEEEEE
T ss_pred eecCcCCccEEEeCCCEEEEEEEEE
Confidence 789999999997645 89999987
No 97
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.35 E-value=2.1e-11 Score=121.97 Aligned_cols=187 Identities=16% Similarity=0.124 Sum_probs=114.6
Q ss_pred CCCCCCcccccCC-cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCC--------CcEEEEEEEEec--------
Q 007213 134 EPNFSLPWQRKRQ-YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGS--------DTKYLATVLAIG-------- 193 (612)
Q Consensus 134 ~~~~~~p~~~~~~-~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~~--------g~~~~a~vv~~d-------- 193 (612)
.....+||..... ....|+|.+|++.||||+|||+.+. ..+.|.+... ...+..+-+..+
T Consensus 7 a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~ 86 (248)
T 2r0l_A 7 SLPGSHPWLAAIYIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNP 86 (248)
T ss_dssp CCTTSSTTEEEEEETTEEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTST
T ss_pred CCCCCCCeEEEEEcCCceEEEEEEcCCEEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcCCC
Confidence 3445677765432 2468999999999999999999764 4677877421 223333333332
Q ss_pred cCCCeEEEEeccc-----cccCCeeeeEcCCC---CCCCCeEEEEEeCCCCCc--------eeEEEEEEeceeeeccc-C
Q 007213 194 TECDIAMLTVEDD-----EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGDT--------ISVTSGVVSRIEILSYV-H 256 (612)
Q Consensus 194 ~~~DLAlLkv~~~-----~~~~~l~pl~l~~~---~~~G~~V~aiG~p~g~~~--------~sv~~GiIs~~~~~~~~-~ 256 (612)
..+|||||+++.+ .+...+.|+.|... ...|+.+++.||...... ..+..-+++...|.... .
T Consensus 87 ~~~DiALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~ 166 (248)
T 2r0l_A 87 SDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVY 166 (248)
T ss_dssp TTTCCEEEEECCSSSCSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHTSTTTT
T ss_pred CCCCEEEEEeCCcccccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhCCcccc
Confidence 2469999999865 34567899999763 245899999998643211 12222333333333210 1
Q ss_pred C-ceeeeEEEEc-----cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 257 G-STELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 257 ~-~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
+ .....+++.. ...|.|+|||||+.. +| .++||++.+.........+....+...+.++++..+
T Consensus 167 ~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 239 (248)
T 2r0l_A 167 GADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIR 239 (248)
T ss_dssp GGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHHC
T ss_pred CCcCCCCEEeECCCCCCCcCCCCccCCeEEEEECCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 1 1112345552 357899999999965 46 599999986432222233455666667777766553
No 98
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.34 E-value=1.7e-11 Score=122.05 Aligned_cols=184 Identities=18% Similarity=0.183 Sum_probs=112.1
Q ss_pred CCCCCcccccC-----CcceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEEEecc----
Q 007213 135 PNFSLPWQRKR-----QYSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVLAIGT---- 194 (612)
Q Consensus 135 ~~~~~p~~~~~-----~~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv~~d~---- 194 (612)
....+||+... .....|+|.+|++.||||+|||+.+. ..+.|.+.. +...+..+-+..++
T Consensus 8 ~~~~~Pw~v~l~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~ 87 (238)
T 3bg8_A 8 VRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKM 87 (238)
T ss_dssp CTTSSTTEEEEEECSSSCEEEEEEEEEETTEEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEECTTCCC
T ss_pred CCCCcCcEEEEEeecCCCcEEEEEEEeeCCEEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEECCCCCC
Confidence 34456666432 23468999999999999999999754 456776531 23345554444544
Q ss_pred ---CCCeEEEEeccc-cccCCeeeeEcCCC---CCCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCC-ce
Q 007213 195 ---ECDIAMLTVEDD-EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHG-ST 259 (612)
Q Consensus 195 ---~~DLAlLkv~~~-~~~~~l~pl~l~~~---~~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~-~~ 259 (612)
.+|||||+++.+ .+...+.|+.|... ...+..+++.||..... ...+..-+++...|...... ..
T Consensus 88 ~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~ 167 (238)
T 3bg8_A 88 AESGYDIALLKLETTVNYTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKI 167 (238)
T ss_dssp GGGSCCCEEEEESSCCCCBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHHCTTSCC
T ss_pred CCCCCcEEEEEECCccccCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhhhcCCCC
Confidence 469999999865 34556889988763 24588899999864321 11223334444444322111 11
Q ss_pred eeeEEEEc-----cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 260 ELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 260 ~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
...+++.. ...|.|+|||||+.. +| .++||++.+.........+...-+.....++++.
T Consensus 168 ~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 234 (238)
T 3bg8_A 168 THKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 234 (238)
T ss_dssp CTTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCCeEeecCCCCCCCcCCCCCCcceEEEECCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHH
Confidence 12345552 357899999999965 45 5999999854322222234445556666666554
No 99
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.34 E-value=1.8e-11 Score=123.12 Aligned_cols=186 Identities=17% Similarity=0.123 Sum_probs=114.1
Q ss_pred CCCCCCcccccC--CcceEEEEEEEeCCEEEecccccCC---CCeEEEEEcC--------CCcEEEEEEEEecc------
Q 007213 134 EPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEH---YTQVKLKKRG--------SDTKYLATVLAIGT------ 194 (612)
Q Consensus 134 ~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~---~~~i~V~~~~--------~g~~~~a~vv~~d~------ 194 (612)
.....+||+... .....|+|.+|++.||||+|||+.+ ...+.|.+.. +...+..+-+..++
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~ 86 (261)
T 3gyl_B 7 AVAGQWPWQVSITYEGVHVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEG 86 (261)
T ss_dssp CCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCSTT
T ss_pred CCCCCCCcEEEEeeCCceEEEEEEEcCCEEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCCcCCCC
Confidence 344566776532 2346899999999999999999963 3457777631 11234444445554
Q ss_pred -CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC---------ceeEEEEEEeceeeecccC----
Q 007213 195 -ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD---------TISVTSGVVSRIEILSYVH---- 256 (612)
Q Consensus 195 -~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~---------~~sv~~GiIs~~~~~~~~~---- 256 (612)
.+|||||+++.+ .+...+.|+.|.... ..|..+++.||..... ...+...+++...|.....
T Consensus 87 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~ 166 (261)
T 3gyl_B 87 SQGDIALLQLSRPITFSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAK 166 (261)
T ss_dssp CSCCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHHHTTTCC
T ss_pred CCCcEEEEEECCCccCCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhhhccccc
Confidence 359999999865 345578899997532 3588999999974321 1234445555544432211
Q ss_pred ----CceeeeEEEEc-----cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 257 ----GSTELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 257 ----~~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
......++++. ...|.|+|||||+.. +| .++||++.+.........+....+...+.++++..
T Consensus 167 ~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i 241 (261)
T 3gyl_B 167 PEEPHFVQEDMVCAGYVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQSKV 241 (261)
T ss_dssp TTCCCCCCTTEEEESCSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCCSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred ccccccccCCeEeeCCCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCCCCCCCCCCEEEEHHHhHHHHHHHH
Confidence 01112345552 357899999999975 45 59999998643222222344455555556655544
No 100
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.34 E-value=2.5e-11 Score=119.57 Aligned_cols=167 Identities=17% Similarity=0.129 Sum_probs=104.2
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEeccC-------CCeEEEEecccc-ccCC
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGTE-------CDIAMLTVEDDE-FWEG 211 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~~-------~DLAlLkv~~~~-~~~~ 211 (612)
...|+|.+|++.||||+|||+. ..+.|.+.. ....+..+-+..++. +|||||+++.+. +...
T Consensus 27 ~~~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (227)
T 3fzz_A 27 KMFCGGFLVRDKFVLTAAHCKG--RSMTVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRA 104 (227)
T ss_dssp EEEEEEEEEETTEEEECTTCCC--EEEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred eeEEEEEEEeCCEEEECcccCC--CCcEEEEcccccCCCCCCceEEEEEEEEECcCCCCCCCcCCEEEEEECCcCCCCCc
Confidence 4689999999999999999985 456666631 123344544555543 699999997653 4557
Q ss_pred eeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCCc-eeeeEEEEc-----cCCCCCCC
Q 007213 212 VLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGS-TELLGLQID-----AAINSGNS 275 (612)
Q Consensus 212 l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~~-~~~~~i~~d-----a~i~~G~S 275 (612)
+.|+.|.... ..|+.+++.||..... ...+..-+++...|....... .....++.. ...|.|+|
T Consensus 105 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDs 184 (227)
T 3fzz_A 105 VRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQSSYNRANEICVGDSKIKGASFEEDS 184 (227)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHHTTTCCTTTEEEECCCSSCBCCTTTTT
T ss_pred ccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhhccccCCCceEEEeCCCCCCcccccCC
Confidence 8899987533 4589999999964321 112233333333333211111 111345542 45788999
Q ss_pred CCeEecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 276 GGPAFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 276 GGPlvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
||||+. ++.++||++.+.... ...+....+...+.++++..
T Consensus 185 GgPl~~-~~~l~Gi~S~g~~c~--~~p~vyt~V~~~~~WI~~~i 225 (227)
T 3fzz_A 185 GGPLVC-KRAAAGIVSYGQTDG--SAPQVFTRVLSFVSWIKKTM 225 (227)
T ss_dssp TCEEEE-TTEEEEEEEECCTTC--SSSEEEEEGGGTHHHHHHHH
T ss_pred ccceEE-ecCCcEEEEECCCCC--CCCeEEEEhHHhHHHHHHHH
Confidence 999997 579999999855322 12344555666666666544
No 101
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.34 E-value=4.9e-11 Score=118.18 Aligned_cols=185 Identities=15% Similarity=0.146 Sum_probs=112.5
Q ss_pred CCCCCCcccccCC--cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC----CCcEEEEEEEEecc-------CCC
Q 007213 134 EPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG----SDTKYLATVLAIGT-------ECD 197 (612)
Q Consensus 134 ~~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~----~g~~~~a~vv~~d~-------~~D 197 (612)
.....+||..... ....|+|.+|++.||||+|||+.+. ..+.|.+.. .+..+..+-+..++ .+|
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~~D 86 (232)
T 2oq5_A 7 VEEGEWPWQASLQWDGSHRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYD 86 (232)
T ss_dssp CCTTSSTTEEEEEETTEEEEEEEEEETTEEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCTTC
T ss_pred CCCCCCCeeEEEEeCCCeeEEEEEEcCCEEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCCCC
Confidence 3344567765322 3468999999999999999999753 356777632 22334444444443 469
Q ss_pred eEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeeccc--CCceeeeEE
Q 007213 198 IAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYV--HGSTELLGL 264 (612)
Q Consensus 198 LAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~--~~~~~~~~i 264 (612)
||||+++.+ .+.+.+.|+.|.... ..|+.+++.||..... ...+..-+++...|.... .......++
T Consensus 87 IALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 166 (232)
T 2oq5_A 87 ISLAELSSPVPYTNAVHRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRML 166 (232)
T ss_dssp CEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEE
T ss_pred EEEEEecCCCccCCceeEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCccCCCEE
Confidence 999999865 345568899887532 3588999999864321 112333445444443211 111112345
Q ss_pred EEc-----cCCCCCCCCCeEecCC--C--eEEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 265 QID-----AAINSGNSGGPAFNDK--G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 265 ~~d-----a~i~~G~SGGPlvn~~--G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
+.. ...|.|+|||||+..+ | .++||++.+.........+...-+...+.++++.
T Consensus 167 Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 229 (232)
T 2oq5_A 167 CAGSLEGKTDACQGDSGGPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSK 229 (232)
T ss_dssp EEECTTCSSBCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGGHHHHHHH
T ss_pred eecCCCCCCccCCCCCCCcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHHH
Confidence 552 3678999999999643 3 6999999754322112234445555566666543
No 102
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.34 E-value=1.9e-11 Score=125.59 Aligned_cols=193 Identities=17% Similarity=0.122 Sum_probs=117.7
Q ss_pred EEEeeeeCCCCCCcccccC----CcceEEEEEEEeCCEEEecccccCC--------CCeEEEEEcCC---------CcEE
Q 007213 127 KVFCVHTEPNFSLPWQRKR----QYSSSSSGFAIGGRRVLTNAHSVEH--------YTQVKLKKRGS---------DTKY 185 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~----~~~~~GSGfiI~~g~ILT~aHvV~~--------~~~i~V~~~~~---------g~~~ 185 (612)
+|..........+||+... .....|+|.+|++.||||+|||+.. ...+.|.+... .+.+
T Consensus 30 rIvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~ 109 (289)
T 2bdy_A 30 RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKIS 109 (289)
T ss_dssp -CBSCEECCTTSCTTEEEEEETTTTEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEE
T ss_pred eEECCEECCCCCCCCeEEEEECCCCCEEEEEEEecCCEEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceee
Confidence 6667777777788998643 1346899999999999999999942 34577777421 1222
Q ss_pred EEEEEEecc--------CCCeEEEEeccc-cccCCeeeeEcCCC------CCCCCeEEEEEeCCCCCc------------
Q 007213 186 LATVLAIGT--------ECDIAMLTVEDD-EFWEGVLPVEFGEL------PALQDAVTVVGYPIGGDT------------ 238 (612)
Q Consensus 186 ~a~vv~~d~--------~~DLAlLkv~~~-~~~~~l~pl~l~~~------~~~G~~V~aiG~p~g~~~------------ 238 (612)
..+-+..++ .+|||||+++.+ .+.+.+.|+.|... ...|..+++.||......
T Consensus 110 ~v~~i~~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~ 189 (289)
T 2bdy_A 110 MLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV 189 (289)
T ss_dssp EEEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSB
T ss_pred eeEEEEECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCcccccccc
Confidence 333333332 369999999865 34557889999753 245889999998753211
Q ss_pred -eeEEEEEEeceeeecccCCceeeeEEEEc--------cCCCCCCCCCeEecC---CC--eEEEEEecccCCCccceeec
Q 007213 239 -ISVTSGVVSRIEILSYVHGSTELLGLQID--------AAINSGNSGGPAFND---KG--KCVGIAFQSLKHEDVENIGY 304 (612)
Q Consensus 239 -~sv~~GiIs~~~~~~~~~~~~~~~~i~~d--------a~i~~G~SGGPlvn~---~G--~VIGI~~~~~~~~~~~~~~~ 304 (612)
..+..-+++...|...........+|+.. ...|.|+|||||+.. +| .++||++.+.........+.
T Consensus 190 L~~~~v~i~~~~~C~~~~~~~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~v 269 (289)
T 2bdy_A 190 LQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGF 269 (289)
T ss_dssp CEEEEEEBCCHHHHHHTCSSCCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEE
T ss_pred ceEEEEEEECHHHhhccccCcCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCCCCCEE
Confidence 11222333333333221111112356652 358999999999864 34 59999998653222222344
Q ss_pred ccChhhHHHHHHHHH
Q 007213 305 VIPTPVIMHFIQDYE 319 (612)
Q Consensus 305 aIPi~~i~~~l~~l~ 319 (612)
..-+...+.++++..
T Consensus 270 yt~V~~y~~WI~~~i 284 (289)
T 2bdy_A 270 YTHVFRLKKWIQKVI 284 (289)
T ss_dssp EEETGGGHHHHHHHH
T ss_pred EEEHHHHHHHHHHHH
Confidence 555666666666554
No 103
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.33 E-value=3e-11 Score=121.12 Aligned_cols=171 Identities=18% Similarity=0.148 Sum_probs=106.2
Q ss_pred ceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEEEecc-------CCCeEEEEeccc---
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVLAIGT-------ECDIAMLTVEDD--- 206 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv~~d~-------~~DLAlLkv~~~--- 206 (612)
...|+|.+|++.||||+|||+.+. ..+.|.+.. ....+..+-+..++ .+|||||+++.+
T Consensus 29 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~ 108 (252)
T 1rtf_B 29 RFLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSR 108 (252)
T ss_dssp EEEEEEEECSSSEEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEECCSSSC
T ss_pred CEEEEEEEEeCCEEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEECCcccc
Confidence 458999999999999999999753 457777732 12344444444443 469999999865
Q ss_pred --cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeecccC--CceeeeEEEEc----
Q 007213 207 --EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYVH--GSTELLGLQID---- 267 (612)
Q Consensus 207 --~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~~--~~~~~~~i~~d---- 267 (612)
.+...+.|+.|.... ..+..+++.||..... ...+..-+++...|..... ......+++..
T Consensus 109 ~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~ 188 (252)
T 1rtf_B 109 CAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRS 188 (252)
T ss_dssp CSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC-
T ss_pred ccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecHHHhhhhhccCCCCCCCEEEecCCCC
Confidence 344568899887532 3478899999864321 1123344444444442211 11112345542
Q ss_pred -------cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 268 -------AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 268 -------a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
...|.|+|||||+.. +| .++||++.+........-+...-+...+.++++.
T Consensus 189 ~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 249 (252)
T 1rtf_B 189 GGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDN 249 (252)
T ss_dssp -----CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCCCCCCCCCeEEEEHHHHHHHHHHh
Confidence 457899999999965 45 6999999865322222234445556666666553
No 104
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.33 E-value=1.3e-11 Score=122.45 Aligned_cols=185 Identities=17% Similarity=0.162 Sum_probs=113.4
Q ss_pred CCCCCCcccccCC--cceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC--------CcEEEEEEEEecc---------
Q 007213 134 EPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS--------DTKYLATVLAIGT--------- 194 (612)
Q Consensus 134 ~~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~--------g~~~~a~vv~~d~--------- 194 (612)
.....+||..... ....|+|.+|++.||||+|||+.....+.|.+... ...+..+-+..++
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~ 86 (235)
T 2wph_S 7 AKPGQFPWQVVLNGKVDAFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTY 86 (235)
T ss_dssp CCTTSSTTEEEEESSSTTCEEEEEEETTEEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSSCC
T ss_pred CCCCCCCeEEEEccCCCeeEEEEEEeCCEEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCCcC
Confidence 3444567764321 24579999999999999999998777778877321 1233333333332
Q ss_pred CCCeEEEEeccc-cccCCeeeeEcCCCC-----CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCCceee
Q 007213 195 ECDIAMLTVEDD-EFWEGVLPVEFGELP-----ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHGSTEL 261 (612)
Q Consensus 195 ~~DLAlLkv~~~-~~~~~l~pl~l~~~~-----~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~~~~~ 261 (612)
.+|||||+++.+ .+...+.|+.|.... ..+..+++.||..... ...+..-+++...|..........
T Consensus 87 ~~DIALl~L~~~~~~~~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~ 166 (235)
T 2wph_S 87 NHDIALLELDEPLVLNSYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTITN 166 (235)
T ss_dssp TTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCSSCCCT
T ss_pred CCCEEEEEECCcCcCCCCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCcccCCCCC
Confidence 369999999865 344568899887532 2378899999864321 112334445544443222111122
Q ss_pred eEEEEc-----cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 262 LGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 262 ~~i~~d-----a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
.+++.. ...|.|+|||||+.. +| .++||++.+.........+....+...+.++++.
T Consensus 167 ~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 231 (235)
T 2wph_S 167 NMFCAGFHEGGRDSCQGDSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEK 231 (235)
T ss_dssp TEEEESCTTCSCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred CEEEeCCCCCCCccCCCCCCCceEEeECCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 346653 357899999999964 45 5999999854322222334455566666666554
No 105
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.33 E-value=1.8e-11 Score=122.80 Aligned_cols=186 Identities=18% Similarity=0.121 Sum_probs=109.5
Q ss_pred CCCCCCcccccC----CcceEEEEEEEeCCEEEecccccC--------CCCeEEEEEcCC--------Cc-EEEEEEEEe
Q 007213 134 EPNFSLPWQRKR----QYSSSSSGFAIGGRRVLTNAHSVE--------HYTQVKLKKRGS--------DT-KYLATVLAI 192 (612)
Q Consensus 134 ~~~~~~p~~~~~----~~~~~GSGfiI~~g~ILT~aHvV~--------~~~~i~V~~~~~--------g~-~~~a~vv~~ 192 (612)
.....+||+... .....|+|.+|++.||||+|||+. ....+.|.+... .. ....+-+..
T Consensus 7 a~~~~~Pw~v~l~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~ 86 (259)
T 3rm2_H 7 AEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYI 86 (259)
T ss_dssp CCTTSSTTEEEEEEETTEEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEE
T ss_pred CCCCCcCCEEEEEECCCCceEEEEEEEeCCEEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEEEE
Confidence 334456666432 134589999999999999999994 234567776321 11 122333333
Q ss_pred cc--------CCCeEEEEeccc-cccCCeeeeEcCCCC------CCCCeEEEEEeCCCCCc-------------eeEEEE
Q 007213 193 GT--------ECDIAMLTVEDD-EFWEGVLPVEFGELP------ALQDAVTVVGYPIGGDT-------------ISVTSG 244 (612)
Q Consensus 193 d~--------~~DLAlLkv~~~-~~~~~l~pl~l~~~~------~~G~~V~aiG~p~g~~~-------------~sv~~G 244 (612)
++ .+|||||+++.+ .+...+.|+.|.... ..|..+++.||...... ..+..-
T Consensus 87 hp~y~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~~~ 166 (259)
T 3rm2_H 87 HPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLP 166 (259)
T ss_dssp CTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEEEE
T ss_pred CCCCCCCCCCCCcEEEEEeCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEEEE
Confidence 32 359999999865 345678899997522 35889999998753211 112222
Q ss_pred EEeceeeecccCCceeeeEEEEc--------cCCCCCCCCCeEecCC---C--eEEEEEecccCCCccceeecccChhhH
Q 007213 245 VVSRIEILSYVHGSTELLGLQID--------AAINSGNSGGPAFNDK---G--KCVGIAFQSLKHEDVENIGYVIPTPVI 311 (612)
Q Consensus 245 iIs~~~~~~~~~~~~~~~~i~~d--------a~i~~G~SGGPlvn~~---G--~VIGI~~~~~~~~~~~~~~~aIPi~~i 311 (612)
+++...|...........+++.. ...|.|+|||||+..+ | .++||++.+.........+...-+...
T Consensus 167 ~~~~~~C~~~~~~~~~~~~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~ 246 (259)
T 3rm2_H 167 IVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRL 246 (259)
T ss_dssp BCCHHHHHHTCSSCCCTTEEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGG
T ss_pred EeCHHHhhhhhcccCCCceEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHh
Confidence 33333333221111122346652 2689999999999643 3 699999986433222233444555556
Q ss_pred HHHHHHHH
Q 007213 312 MHFIQDYE 319 (612)
Q Consensus 312 ~~~l~~l~ 319 (612)
+.++++..
T Consensus 247 ~~WI~~~i 254 (259)
T 3rm2_H 247 KKWIQKVI 254 (259)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 106
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.32 E-value=2.8e-11 Score=120.63 Aligned_cols=171 Identities=15% Similarity=0.187 Sum_probs=105.4
Q ss_pred ceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEEEecc---------CCCeEEEEeccc-
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVLAIGT---------ECDIAMLTVEDD- 206 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv~~d~---------~~DLAlLkv~~~- 206 (612)
...|+|.+|++.||||+|||+.+. ..+.|.+.. ....+..+-+..++ .+|||||+++.+
T Consensus 28 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 107 (247)
T 3mhw_U 28 TYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 107 (247)
T ss_dssp EEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEEEECTT
T ss_pred ceEEEEEEEeCCEEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEEeCCcc
Confidence 457999999999999999999753 346777631 12234444444443 369999999765
Q ss_pred ----cccCCeeeeEcCCC---CCCCCeEEEEEeCCCCC--------ceeEEEEEEeceeeeccc-C-CceeeeEEEEc--
Q 007213 207 ----EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGD--------TISVTSGVVSRIEILSYV-H-GSTELLGLQID-- 267 (612)
Q Consensus 207 ----~~~~~l~pl~l~~~---~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~~~~~~-~-~~~~~~~i~~d-- 267 (612)
.+...+.|+.|... ...|+.+++.||..... ...+..-+++...|.... . ......+++..
T Consensus 108 ~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 187 (247)
T 3mhw_U 108 GRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 187 (247)
T ss_dssp SCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEEECT
T ss_pred ccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEChHHhcCccccCCcCCCCeEecCCC
Confidence 34457888888752 34589999999865321 112334444444443211 1 11112345542
Q ss_pred ---cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 268 ---AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 268 ---a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
...|.|+|||||+.. +| .++||++.+.........+....+...+.++++.
T Consensus 188 ~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~ 244 (247)
T 3mhw_U 188 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSH 244 (247)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGCHHHHHHH
T ss_pred CCCCccCCCCCCCeEEEEECCCEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 367899999999965 44 5999999864322222334455566666666554
No 107
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=99.32 E-value=5.3e-13 Score=143.04 Aligned_cols=136 Identities=13% Similarity=0.136 Sum_probs=52.8
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEe
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 430 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l 430 (612)
.|++|..|.++|||++ | |++||+|++|||+++.+|.... +..++.....+..+.|+|.|++...++.+..
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~--------~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~~ 303 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLAT--------CQGIIKGLKNQTQVKLNIVSCPPVTTVLIKR 303 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTT--------HHHHTTTCTTCSCEEEEEEECCSCC------
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHH--------HHHHHHhccCCCccccccccccccceeeEee
Confidence 3689999999999999 9 9999999999999999995422 3355656556778999999988765544421
Q ss_pred ccCccccCCCCCCCCCCceeeccEEEeecCchhhhhhHHhhccHHHHHHhCCcccccccccchhhhhhhccCCccccccc
Q 007213 431 ATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLWCLRSPLCLNCFN 510 (612)
Q Consensus 431 ~~~~~~~~~~~~~~~p~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (612)
... ..+|+|.
T Consensus 304 ~~~-----------------~~~lG~~----------------------------------------------------- 313 (388)
T 3suz_A 304 PDL-----------------KYQLGFS----------------------------------------------------- 313 (388)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCC-----------------CCccceE-----------------------------------------------------
Confidence 100 0112221
Q ss_pred hhhhhcccCCCCceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEe
Q 007213 511 KVFLLSLSLTFSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLE 577 (612)
Q Consensus 511 ~~~~~~~~~~~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~ 577 (612)
..+.+|..|.++++|..+|+++||+|++|||++|. +++++.++|++. ++.+.|++.
T Consensus 314 ----------i~~g~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~~-~~~v~L~V~ 371 (388)
T 3suz_A 314 ----------VQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSNS-VGEIHMKTM 371 (388)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ----------EecCEEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEE
Confidence 11136788999999999999999999999999997 679999999864 466666664
No 108
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.32 E-value=5e-11 Score=122.61 Aligned_cols=185 Identities=17% Similarity=0.165 Sum_probs=111.2
Q ss_pred CCCCCcccccCC--------cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCC-------------CcEEEEEEE
Q 007213 135 PNFSLPWQRKRQ--------YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGS-------------DTKYLATVL 190 (612)
Q Consensus 135 ~~~~~p~~~~~~--------~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~~-------------g~~~~a~vv 190 (612)
....+||+.... ....|+|.+|++.||||+|||+... ..+.|.+... .+.+..+-+
T Consensus 8 ~~~~~Pw~v~l~~~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V~~i 87 (290)
T 1fiw_A 8 AHGAWPWMVSLQIFTYHNNRRYHVCGGSLLNSQWLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKI 87 (290)
T ss_dssp CTTSSTTEEEEEEEETTTTEEEEEEEEEEEETTEEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEEEEE
T ss_pred CCCCCCcEEEEEEeccCCCccceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEEEEE
Confidence 344566664321 2357999999999999999999753 3466766311 123333333
Q ss_pred Eecc-------CCCeEEEEeccc-cccCCeeeeEcCCC----CCCCCeEEEEEeCCCCC--------ceeEEEEEEecee
Q 007213 191 AIGT-------ECDIAMLTVEDD-EFWEGVLPVEFGEL----PALQDAVTVVGYPIGGD--------TISVTSGVVSRIE 250 (612)
Q Consensus 191 ~~d~-------~~DLAlLkv~~~-~~~~~l~pl~l~~~----~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~ 250 (612)
..++ .+||||||++.+ .+.+.+.|+.|... +..|+.+++.||..... ...+..-+++...
T Consensus 88 ~~Hp~y~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~~~~ 167 (290)
T 1fiw_A 88 IIHEKYSASSEANDIALMKITPPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGL 167 (290)
T ss_dssp EECTTCBTTTTBTCCEEEEEESCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHH
T ss_pred EECCCCCCCCCCCCEEEEEECCccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEecHHH
Confidence 4443 469999999865 34557889998752 23588999999864321 1233444555444
Q ss_pred eecc--cCCceeeeEEEEc-----cCCCCCCCCCeEecCC---C--eEEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 251 ILSY--VHGSTELLGLQID-----AAINSGNSGGPAFNDK---G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 251 ~~~~--~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~---G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
|... ........+|+.. ...|.|+|||||+..+ | .++||++.+........-+...-+...+.++++.
T Consensus 168 C~~~~~~~~~i~~~~iCag~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~ 247 (290)
T 1fiw_A 168 CNSTRWYNGRIRSTNVCAGYPEGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASK 247 (290)
T ss_dssp HTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHHHHHHH
T ss_pred hccccccCCcCCCCEEEEecCCCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHH
Confidence 4321 1111122346653 3678999999999653 3 6999999864322212223344455556666554
Q ss_pred H
Q 007213 319 E 319 (612)
Q Consensus 319 ~ 319 (612)
.
T Consensus 248 ~ 248 (290)
T 1fiw_A 248 I 248 (290)
T ss_dssp H
T ss_pred h
Confidence 4
No 109
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.32 E-value=2.3e-11 Score=122.30 Aligned_cols=187 Identities=18% Similarity=0.196 Sum_probs=116.4
Q ss_pred CCCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCCC---eEEEEEcC--------CCcEEEEEEEEecc------
Q 007213 134 EPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYT---QVKLKKRG--------SDTKYLATVLAIGT------ 194 (612)
Q Consensus 134 ~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~~---~i~V~~~~--------~g~~~~a~vv~~d~------ 194 (612)
.....+||+... .....|+|.+|++.||||+|||+.+.. .+.|.+.. ....+..+-+..++
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~ 86 (254)
T 2bz6_H 7 CPKGECPWQVLLLVNGAQLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGT 86 (254)
T ss_dssp CCTTSSTTEEEEEETTEEEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCCTTS
T ss_pred CCCCCcCCEEEEEeCCCcEEEEEEecCCEEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCCCCCCC
Confidence 344566776532 234689999999999999999998654 37787732 12334444444443
Q ss_pred -CCCeEEEEeccc-cccCCeeeeEcCCCC------CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCC--
Q 007213 195 -ECDIAMLTVEDD-EFWEGVLPVEFGELP------ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHG-- 257 (612)
Q Consensus 195 -~~DLAlLkv~~~-~~~~~l~pl~l~~~~------~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~-- 257 (612)
.+|||||+++.+ .+.+.+.|+.|.... ..++.+++.||..... ...+..-+++...|......
T Consensus 87 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~ 166 (254)
T 2bz6_H 87 TNHDIALLRLHQPVVLTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVG 166 (254)
T ss_dssp CSSCCEEEEESSCCCCBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHSCCCT
T ss_pred CcCcEEEEEECCccccCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhhhhccc
Confidence 469999999865 345578899987522 3478899999864321 11233344444444321111
Q ss_pred ---ceeeeEEEEc-----cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 258 ---STELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 258 ---~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
.....++++. ...|.|+|||||+.. +| .++||++.+.........+...-+...+.++++..+
T Consensus 167 ~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 240 (254)
T 2bz6_H 167 DSPNITEYMFCAGYSDGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMR 240 (254)
T ss_dssp TCCCCCTTEEEESCSSSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHT
T ss_pred cCCccCCCEEeecCCCCCCccccccCCCceEEeECCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 1112346652 357899999999965 45 599999986532222233455667777778877664
No 110
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.32 E-value=2.7e-11 Score=123.53 Aligned_cols=169 Identities=18% Similarity=0.144 Sum_probs=102.1
Q ss_pred ceEEEEEEEeCCEEEecccccCCC------CeEEEEEcCC-------------------CcEEEEEEEEecc--------
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHY------TQVKLKKRGS-------------------DTKYLATVLAIGT-------- 194 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~------~~i~V~~~~~-------------------g~~~~a~vv~~d~-------- 194 (612)
...|+|.+|++.||||+|||+.+. ..+.|.+... ...+..+-+..++
T Consensus 50 ~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 129 (278)
T 2olg_A 50 QFACGGSLINNRYIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKD 129 (278)
T ss_dssp EEEEEEEECSSSEEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSS
T ss_pred ceeEEEEEEeCCEEEEhHHhCCCcccccccceeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCCC
Confidence 457999999999999999999752 3567776310 1223333333332
Q ss_pred -CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC------ceeEEEEEEeceeeecccCC---cee
Q 007213 195 -ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHG---STE 260 (612)
Q Consensus 195 -~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~~~~~~---~~~ 260 (612)
.+|||||+++.+ .+...+.|+.|.... ..|+.+++.||..... ...+..-+++...|...... ...
T Consensus 130 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~ 209 (278)
T 2olg_A 130 RYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVR 209 (278)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBCEEEEEEBCCGGGGGGGGSSTTCCCC
T ss_pred CCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchhhcccccccCHHHHHHHhccccccCC
Confidence 479999999865 345578999997532 4589999999975321 11233344444444432111 111
Q ss_pred eeEEEEc----cCCCCCCCCCeEecC--CC--eEEEEEecccCCCccceeecccChhhHHHHHH
Q 007213 261 LLGLQID----AAINSGNSGGPAFND--KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQ 316 (612)
Q Consensus 261 ~~~i~~d----a~i~~G~SGGPlvn~--~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~ 316 (612)
..+++.. ...|.|+|||||+.. +| .++||++.+........-+...-+...+.+++
T Consensus 210 ~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~ 273 (278)
T 2olg_A 210 SSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIE 273 (278)
T ss_dssp TTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBCSTTCBCEEEEEGGGGHHHHH
T ss_pred CceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCCCCCCCCCcEEeEHHHHHHHHH
Confidence 2346653 357899999999964 34 69999998542211111233444444555543
No 111
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.32 E-value=7.8e-12 Score=144.20 Aligned_cols=153 Identities=13% Similarity=0.146 Sum_probs=111.7
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE--EEEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI--LNFN 427 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~--~~~~ 427 (612)
..|++|..|.++|||++ | |+.||+|++|||+.+.++.... ...++. ..|+.+.|+|.|++.. ..++
T Consensus 88 ~~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~~~~~~~~ 157 (721)
T 2xkx_A 88 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSA--------AVEALK--EAGSIVRLYVMRRKPPAEKVME 157 (721)
T ss_pred CCCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHhh--ccccccceEEEeccccccccee
Confidence 45899999999999999 9 9999999999999999986421 123332 3688999999998854 2344
Q ss_pred EEeccCccccCCCCCCCCCCceeeccEEEeecCchhhhhhHHhhccHHHHHHhCCcccccccccchhhhhhhccCCcccc
Q 007213 428 ITLATHRRLIPSHNKGRPPSYYIIAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSCIQCHNCQMSSLLWCLRSPLCLN 507 (612)
Q Consensus 428 v~l~~~~~~~~~~~~~~~p~~~~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (612)
+++.... . -.||.+.... ... . .+
T Consensus 158 v~l~k~~------------~---~lG~~i~~~~-------------~~~----~--------------------~~---- 181 (721)
T 2xkx_A 158 IKLIKGP------------K---GLGFSIAGGV-------------GNQ----H--------------------IP---- 181 (721)
T ss_pred eeeeeec------------C---CCceeeccCC-------------Ccc----c--------------------cC----
Confidence 4443210 0 1244333222 000 0 00
Q ss_pred ccchhhhhcccCCCCceEEEeeeccccccccc-ccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeEEE
Q 007213 508 CFNKVFLLSLSLTFSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQVVV 583 (612)
Q Consensus 508 ~~~~~~~~~~~~~~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~~~ 583 (612)
...+++|+.|.++++|..+| ++.||+|++|||++|.++ .++.++++.. ++.+.|.+.|++...
T Consensus 182 ------------~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~V~R~g~~~ 247 (721)
T 2xkx_A 182 ------------GDNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKNT-YDVVYLKVAKPSNAY 247 (721)
T ss_pred ------------CCCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHcC-CCeEEEEEEeCCccc
Confidence 14679999999999999999 999999999999999986 6788888764 578999999987653
No 112
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.31 E-value=2.4e-11 Score=122.09 Aligned_cols=171 Identities=14% Similarity=0.106 Sum_probs=104.5
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC---------CcEEEEEEEEecc-------CCCeEEEEeccc-cccC
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS---------DTKYLATVLAIGT-------ECDIAMLTVEDD-EFWE 210 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~---------g~~~~a~vv~~d~-------~~DLAlLkv~~~-~~~~ 210 (612)
...|+|.+|++.||||+|||+.+...+.|.+... ...+..+-+..++ .+|||||+++.+ .+.+
T Consensus 40 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 119 (251)
T 1pyt_D 40 RHTCGGTLITPNHVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGD 119 (251)
T ss_dssp EEEEEEEEEETTEEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCS
T ss_pred ceEEEeEEecCCEEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEECCCcccCC
Confidence 4579999999999999999999877888887421 1233444444443 469999999865 3455
Q ss_pred CeeeeEcCCCC---CCCCeEEEEEeCCCCCc-------eeEEEEEEeceeeeccc--CCceeeeEEEEc----cCCCCCC
Q 007213 211 GVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEILSYV--HGSTELLGLQID----AAINSGN 274 (612)
Q Consensus 211 ~l~pl~l~~~~---~~G~~V~aiG~p~g~~~-------~sv~~GiIs~~~~~~~~--~~~~~~~~i~~d----a~i~~G~ 274 (612)
.+.|+.|.... ..+..+++.||...... ..+..-+++...|.... .......+++.. ...|.|+
T Consensus 120 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GD 199 (251)
T 1pyt_D 120 TIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGGDGVISACNGD 199 (251)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTTEEEECCSCSSCCCCSC
T ss_pred CeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchhhccCCCcCCCeEEecCCCCCccCCCC
Confidence 78899987532 34788999998753211 11122233333332211 111112345553 3578999
Q ss_pred CCCeEecC-CC--eEEEEEeccc--CCCccceeecccChhhHHHHHHHH
Q 007213 275 SGGPAFND-KG--KCVGIAFQSL--KHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 275 SGGPlvn~-~G--~VIGI~~~~~--~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
|||||+.. +| .++||++.+. ........+...-+.....++++.
T Consensus 200 SGgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 248 (251)
T 1pyt_D 200 SGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQK 248 (251)
T ss_dssp TTCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHH
T ss_pred CCCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 99999965 45 6999999753 111112233444555555555543
No 113
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.31 E-value=2.9e-11 Score=123.75 Aligned_cols=193 Identities=16% Similarity=0.127 Sum_probs=117.6
Q ss_pred EEEeeeeCCCCCCcccccCC-cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCC--------CcEEEEEEEEec-
Q 007213 127 KVFCVHTEPNFSLPWQRKRQ-YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGS--------DTKYLATVLAIG- 193 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~~-~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~~--------g~~~~a~vv~~d- 193 (612)
+|..........+||..... ....|+|.+|++.||||+|||+.+. ..+.|.+... ...+..+-+..+
T Consensus 35 rIvgG~~a~~~~~Pw~v~l~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp 114 (283)
T 1yc0_A 35 RIIGGSSSLPGSHPWLAAIYIGDSFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYT 114 (283)
T ss_dssp -CBSCEECCTTSSTTEEEEEETTEEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECT
T ss_pred ceECCeECCCCCCCeEEEEEcCCcEEEEEEeeCCEEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecC
Confidence 45555555556677775432 1468999999999999999999764 4677877321 123333333332
Q ss_pred -------cCCCeEEEEeccc-----cccCCeeeeEcCCC---CCCCCeEEEEEeCCCCC--------ceeEEEEEEecee
Q 007213 194 -------TECDIAMLTVEDD-----EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGD--------TISVTSGVVSRIE 250 (612)
Q Consensus 194 -------~~~DLAlLkv~~~-----~~~~~l~pl~l~~~---~~~G~~V~aiG~p~g~~--------~~sv~~GiIs~~~ 250 (612)
..+|||||+++.+ .+...+.|+.|... ...|+.+++.||..... ...+..-+++...
T Consensus 115 ~y~~~~~~~~DIALl~L~~~~~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~ 194 (283)
T 1yc0_A 115 LYSVFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHK 194 (283)
T ss_dssp TCCTTSTTTTCCEEEEECCBTTBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHH
T ss_pred ccccCCCCCCceEEEEeCCCccccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHH
Confidence 2469999999865 34567899999753 23589999999875321 1122233333333
Q ss_pred eecc-cCC-ceeeeEEEEc-----cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 251 ILSY-VHG-STELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 251 ~~~~-~~~-~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
|... ..+ .....+++.. ...|.|+|||||+.. +| .++||++.+.........+....+.....++++..
T Consensus 195 C~~~~~~~~~~~~~~iCa~~~~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i 273 (283)
T 1yc0_A 195 CSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRI 273 (283)
T ss_dssp HTSTTTTGGGCCTTEEEESCSSSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHC
T ss_pred hcCccccCCcCCCCEEeeCCCCCCCccCCCCCCCceEEEECCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHHHHHHh
Confidence 4321 011 1112346653 357899999999965 45 59999998643222223344556666677776654
No 114
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.31 E-value=3.5e-11 Score=122.35 Aligned_cols=192 Identities=15% Similarity=0.160 Sum_probs=115.1
Q ss_pred EEEeeeeCCCCCCcccccCC-------cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCC--------CcEEEEE
Q 007213 127 KVFCVHTEPNFSLPWQRKRQ-------YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGS--------DTKYLAT 188 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~~-------~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~~--------g~~~~a~ 188 (612)
+|..........+||..... ....|+|.+|++.||||+|||+.+. ..+.|.+... +..+..+
T Consensus 23 rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~ 102 (276)
T 2jde_A 23 KIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVE 102 (276)
T ss_dssp -CBSSEECCGGGSTTEEEEEEECCCCCEEEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEE
T ss_pred CeECCEECCCCCCCeEEEEEEecCCCccceeeeeEEeeCCEEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEE
Confidence 44444444445566654221 1357999999999999999999753 3567776321 2234444
Q ss_pred EEEecc---------CCCeEEEEeccc-----cccCCeeeeEcCC---CCCCCCeEEEEEeCCCCC--------ceeEEE
Q 007213 189 VLAIGT---------ECDIAMLTVEDD-----EFWEGVLPVEFGE---LPALQDAVTVVGYPIGGD--------TISVTS 243 (612)
Q Consensus 189 vv~~d~---------~~DLAlLkv~~~-----~~~~~l~pl~l~~---~~~~G~~V~aiG~p~g~~--------~~sv~~ 243 (612)
-+..++ .+|||||+++.+ .+...+.|+.|.. ....|..+++.||..... ...+..
T Consensus 103 ~i~~hp~y~~~~~~~~~DIALl~L~~~~~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~ 182 (276)
T 2jde_A 103 NLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVV 182 (276)
T ss_dssp EEEECTTCEECSSCEESCCEEEEEECTTSCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEE
T ss_pred EEEECCCCCCCCCcCCCcEEEEEeCCccccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhcee
Confidence 444443 359999999765 3456788988875 234589999999965321 112334
Q ss_pred EEEeceeeeccc-C-CceeeeEEEEc-----cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHH
Q 007213 244 GVVSRIEILSYV-H-GSTELLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMH 313 (612)
Q Consensus 244 GiIs~~~~~~~~-~-~~~~~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~ 313 (612)
.+++...|.... . ......+++.. ...|.|+|||||+.. +| .++||++.+.........+....+.....
T Consensus 183 ~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~ 262 (276)
T 2jde_A 183 KLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLP 262 (276)
T ss_dssp EEECHHHHTSTTTTGGGSCTTEEEEECTTSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHH
T ss_pred cccChHHhCcccccCccCCCCeEEecCCCCCCcccccccCcceEEEeCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHH
Confidence 445544444211 1 11112345552 467899999999965 44 49999998643222223344555666666
Q ss_pred HHHHH
Q 007213 314 FIQDY 318 (612)
Q Consensus 314 ~l~~l 318 (612)
++++.
T Consensus 263 WI~~~ 267 (276)
T 2jde_A 263 WIRSH 267 (276)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 66554
No 115
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.30 E-value=2.2e-11 Score=120.72 Aligned_cols=183 Identities=14% Similarity=0.113 Sum_probs=110.1
Q ss_pred CCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCC----CeEEEEEcC---------CCcEEEEEEEEeccC----
Q 007213 135 PNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHY----TQVKLKKRG---------SDTKYLATVLAIGTE---- 195 (612)
Q Consensus 135 ~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~----~~i~V~~~~---------~g~~~~a~vv~~d~~---- 195 (612)
....+||.... .....|+|.+|++.||||+|||+.+. ..+.|.+.. ....+..+-+..++.
T Consensus 8 ~~~~~Pw~v~l~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~~~ 87 (235)
T 4dgj_A 8 KEGAWPWVVGLYYDDRLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRR 87 (235)
T ss_dssp CTTSSTTEEEEEETTEEEEEEEECSSSEEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCBTT
T ss_pred CCCCCCcEEEEeeCCCeEEEEEEeeCCEEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEECCCCCCC
Confidence 34456666432 23468999999999999999999642 346666631 112233444445543
Q ss_pred ---CCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCC-cee
Q 007213 196 ---CDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHG-STE 260 (612)
Q Consensus 196 ---~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~-~~~ 260 (612)
+|||||+++.+ .+...+.|+.|.... ..|+.+++.||..... ...+...+++...|...... ...
T Consensus 88 ~~~~DiALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~ 167 (235)
T 4dgj_A 88 RKDNDIAMMHLEFKVNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYNIT 167 (235)
T ss_dssp TTBTCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHHCTTSCCC
T ss_pred CCCCeEEEEEECCccccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhhccCccCC
Confidence 69999999865 345578899997633 3588999999864211 12334445555444432211 111
Q ss_pred eeEEEEc-----cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHH
Q 007213 261 LLGLQID-----AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (612)
Q Consensus 261 ~~~i~~d-----a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~ 317 (612)
..++++. ...|.|+|||||+.. +| .++||++.+.........+....+...+.++++
T Consensus 168 ~~~~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~ 232 (235)
T 4dgj_A 168 ENMICAGYEEGGIDSCQGDSGGPLMCQENNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQS 232 (235)
T ss_dssp TTEEEECCTTCCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHT
T ss_pred CCeEeecCCCCCCccCCCCCCCeEEEEECCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHH
Confidence 2345652 357899999999965 44 499999986532222223344445555555543
No 116
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.30 E-value=2.3e-11 Score=121.66 Aligned_cols=185 Identities=19% Similarity=0.204 Sum_probs=111.4
Q ss_pred CCCCCcccccCC-----cceEEEEEEEeCCEEEecccccCC----CCeEEEEEcC-----CCcEEEEEEEEecc------
Q 007213 135 PNFSLPWQRKRQ-----YSSSSSGFAIGGRRVLTNAHSVEH----YTQVKLKKRG-----SDTKYLATVLAIGT------ 194 (612)
Q Consensus 135 ~~~~~p~~~~~~-----~~~~GSGfiI~~g~ILT~aHvV~~----~~~i~V~~~~-----~g~~~~a~vv~~d~------ 194 (612)
....+||..... ....|+|.+|++.||||+|||+.. ...+.|.+.. .++.+..+-+..++
T Consensus 8 ~~~~~Pw~v~l~~~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~~~ 87 (245)
T 2f9n_A 8 PRSKWPWQVSLRVRDRYWMHFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQ 87 (245)
T ss_dssp CTTSCTTEEEEEEESSSEEEEEEEEEEETTEEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECTTCCSSC
T ss_pred CCCCCCcEEEEEEcCCCcceEEEEEEeeCCEEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECCCccCCC
Confidence 334566664322 145899999999999999999953 2457776632 12334444444444
Q ss_pred -CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC---------ceeEEEEEEeceeeecccCC---
Q 007213 195 -ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD---------TISVTSGVVSRIEILSYVHG--- 257 (612)
Q Consensus 195 -~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~---------~~sv~~GiIs~~~~~~~~~~--- 257 (612)
.+|||||+++.+ .+...+.|+.|.... ..|+.+++.||..... ...+..-+++...|......
T Consensus 88 ~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~ 167 (245)
T 2f9n_A 88 TGADIALLELEEPVNISSRVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAY 167 (245)
T ss_dssp CTTCCEEEEESSCCCCCSSSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHHHHTTCC
T ss_pred CCCcEEEEEeCCCCcCCCCccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhhhccccc
Confidence 369999999875 345578899887532 3588999999865321 11223334444333321100
Q ss_pred ------ceeeeEEEEc---cCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 258 ------STELLGLQID---AAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 258 ------~~~~~~i~~d---a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
.....+++.. ...|.|+|||||+.. +| .++||++.+........-+...-+...+.++++..
T Consensus 168 ~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 241 (245)
T 2f9n_A 168 TGDDVRIIRDDMLCAGNSQRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYV 241 (245)
T ss_dssp SCTTSCCSCTTEEEECCSSSBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHS
T ss_pred ccccccccccccEeecCCCCCcCCCCCCCceEEEECCEEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 0111345542 357899999999965 56 58999998543222222344555666666666543
No 117
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.28 E-value=1.6e-11 Score=121.05 Aligned_cols=169 Identities=21% Similarity=0.223 Sum_probs=105.5
Q ss_pred EEEEEEEeCCEEEecccccCC--CCeEEEEEcCC-------CcEEEEEEEEec------cCCCeEEEEecccc-ccC-Ce
Q 007213 150 SSSGFAIGGRRVLTNAHSVEH--YTQVKLKKRGS-------DTKYLATVLAIG------TECDIAMLTVEDDE-FWE-GV 212 (612)
Q Consensus 150 ~GSGfiI~~g~ILT~aHvV~~--~~~i~V~~~~~-------g~~~~a~vv~~d------~~~DLAlLkv~~~~-~~~-~l 212 (612)
.|+|++|++.||||+|||+.+ ...+.|.+... +..+..+-+..+ ..+|||||+++.+. +.. .+
T Consensus 27 ~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~v~~~~~~v 106 (228)
T 3h7o_A 27 TCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKS 106 (228)
T ss_dssp EEEEEESSSSEEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEESSCCCCCSSSS
T ss_pred EeeeEEeeCCEEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEECCccccccccc
Confidence 899999999999999999964 34566666321 111222222222 24799999998753 334 67
Q ss_pred eeeEcCCC---CCCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeecccCC-ceeeeEEEEc---cCCCCCCCCCe
Q 007213 213 LPVEFGEL---PALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYVHG-STELLGLQID---AAINSGNSGGP 278 (612)
Q Consensus 213 ~pl~l~~~---~~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~~~-~~~~~~i~~d---a~i~~G~SGGP 278 (612)
+|+.|... ...|+.+++.||..... ...+...+++...|...... .....+++.. ...|.|+||||
T Consensus 107 ~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgP 186 (228)
T 3h7o_A 107 KPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQKVGVSLESGDAGDP 186 (228)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTSCCCSSEEEEECTTCCCCGGGTTCE
T ss_pred ccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCccCCceEEecCCCCCcCCCCCCCCc
Confidence 88888763 35689999999965322 12344445554444432211 1112345543 46789999999
Q ss_pred EecCCCeEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 279 AFNDKGKCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 279 lvn~~G~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
|+. +++++||++....... ...+...-+...+.++++..+
T Consensus 187 l~~-~~~l~Gi~S~g~~c~~-~~p~vyt~v~~~~~WI~~~i~ 226 (228)
T 3h7o_A 187 TVQ-QDTLVGVAAYFPKRPE-GAPEVFTKVGSYVSWIQDIIK 226 (228)
T ss_dssp EEE-TTEEEEEECCCTTCCT-TCCEEEEEGGGTHHHHHHHHT
T ss_pred cee-cCeEEEEEeecCcCCC-CCCcEEEEHHHHHHHHHHHhh
Confidence 997 6889999998543221 233445666666677766543
No 118
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.27 E-value=7.5e-11 Score=125.65 Aligned_cols=194 Identities=15% Similarity=0.116 Sum_probs=119.9
Q ss_pred EEEeeeeCCCCCCcccccC--CcceEEEEEEEeCCEEEecccccCC----CCeEEEEEcC------CCcEEEEEEEEecc
Q 007213 127 KVFCVHTEPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEH----YTQVKLKKRG------SDTKYLATVLAIGT 194 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~----~~~i~V~~~~------~g~~~~a~vv~~d~ 194 (612)
+|..........+||+... .....|+|.+|++.||||+|||+.. ...+.|.+.. .+..+..+-+..++
T Consensus 117 rIvgG~~a~~~~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~Hp 196 (372)
T 1z8g_A 117 RIVGGRDTSLGRWPWQVSLRYDGAHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHG 196 (372)
T ss_dssp -CBSCEECCTTSSTTEEEEEETTEEEEEEEESSSSEEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEET
T ss_pred ceECCEECCCCCCCcEEEEEeCCceEEEEEEecCCEEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEECC
Confidence 5566666666778888643 2346899999999999999999942 2457777632 12234444344333
Q ss_pred -------------CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEecee
Q 007213 195 -------------ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIE 250 (612)
Q Consensus 195 -------------~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~ 250 (612)
.+||||||++.+ .+.+.+.|+.|.... ..|+.+++.||..... ...+..-+++...
T Consensus 197 ~y~~~~~~~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~~ 276 (372)
T 1z8g_A 197 GYLPFRDPNSEENSNDIALVHLSSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDV 276 (372)
T ss_dssp TCGGGTCTTCCCCTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHH
T ss_pred CccccccCCCCCCCccEEEEEECCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChHH
Confidence 359999999865 345578999997532 3488999999864321 1233444555544
Q ss_pred eecc--cCCceeeeEEEEc-----cCCCCCCCCCeEecCC-----C--eEEEEEecccCCCccceeecccChhhHHHHHH
Q 007213 251 ILSY--VHGSTELLGLQID-----AAINSGNSGGPAFNDK-----G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQ 316 (612)
Q Consensus 251 ~~~~--~~~~~~~~~i~~d-----a~i~~G~SGGPlvn~~-----G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~ 316 (612)
+... ........+|+.. ...|.|+|||||+..+ | .++||++.+........-+...-+.....+++
T Consensus 277 C~~~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V~~y~~WI~ 356 (372)
T 1z8g_A 277 CNGADFYGNQIKPKMFCAGYPEGGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIF 356 (372)
T ss_dssp HTSTTTTTTCCCTTEEEESCTTCSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHHHHH
T ss_pred hCcchhcCCcCCCCeEeeecCCCCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHH
Confidence 4321 1111122356653 3578999999999643 3 69999998653222222344555666666666
Q ss_pred HHHH
Q 007213 317 DYEK 320 (612)
Q Consensus 317 ~l~~ 320 (612)
+..+
T Consensus 357 ~~i~ 360 (372)
T 1z8g_A 357 QAIK 360 (372)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6543
No 119
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.27 E-value=1.4e-11 Score=122.86 Aligned_cols=172 Identities=13% Similarity=0.115 Sum_probs=103.6
Q ss_pred ceEEEEEEEeCCEEEecccccCCCCeEEEEEcCCC-cEE--EE--EE-----EEecc-------C--CCeEEEEeccc-c
Q 007213 148 SSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSD-TKY--LA--TV-----LAIGT-------E--CDIAMLTVEDD-E 207 (612)
Q Consensus 148 ~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~g-~~~--~a--~v-----v~~d~-------~--~DLAlLkv~~~-~ 207 (612)
...|+|.+|++.||||+|||+.+...+.|.+.... ... .. +. +..++ . +|||||+++.+ .
T Consensus 25 ~~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~ 104 (240)
T 1fon_A 25 HHTCGGSLIAPDWVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQ 104 (240)
T ss_dssp EEEECCEEEETTEEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEEEECSSCCC
T ss_pred eeEEEEEEeeCCEEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEEEEecCccc
Confidence 36899999999999999999988777777763211 111 01 11 12222 3 89999999865 3
Q ss_pred ccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC-------ceeEEEEEEeceeeeccc-CC-ceeeeEEEEc---cCCCC
Q 007213 208 FWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-------TISVTSGVVSRIEILSYV-HG-STELLGLQID---AAINS 272 (612)
Q Consensus 208 ~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-------~~sv~~GiIs~~~~~~~~-~~-~~~~~~i~~d---a~i~~ 272 (612)
+.+.+.|+.|.... ..|+.+++.||..... ...+..-+++...|.... .+ .....+++.. ...|.
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~ 184 (240)
T 1fon_A 105 LGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCN 184 (240)
T ss_dssp CTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCSTT
T ss_pred cCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhccceecCCccccceEeecCCCCcccC
Confidence 44568899987532 3578899999864321 112233344444443210 11 1112345553 45789
Q ss_pred CCCCCeEecC--CC--eEEEEEeccc--CCCccceeecccChhhHHHHHHHHH
Q 007213 273 GNSGGPAFND--KG--KCVGIAFQSL--KHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 273 G~SGGPlvn~--~G--~VIGI~~~~~--~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
|+|||||+.. +| .++||++... ........+...-+.....++++..
T Consensus 185 GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~ 237 (240)
T 1fon_A 185 GDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETI 237 (240)
T ss_dssp SCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHH
T ss_pred CCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHHH
Confidence 9999999964 46 8999999753 1111122344455555666665543
No 120
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.26 E-value=3.5e-11 Score=126.07 Aligned_cols=191 Identities=16% Similarity=0.188 Sum_probs=115.9
Q ss_pred EEEeeeeCCCCCCcccccCCcceEEEEEEEeCCEEEecccccCC-------CCeEEEEEcCCC-------cEEEEEEEEe
Q 007213 127 KVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEH-------YTQVKLKKRGSD-------TKYLATVLAI 192 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~-------~~~i~V~~~~~g-------~~~~a~vv~~ 192 (612)
+|..........+||+........|+|.+|++.||||+|||+.. ...+.|.+.... ..+..+-+..
T Consensus 89 rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~ 168 (329)
T 1md8_A 89 RIIGGQKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSV 168 (329)
T ss_dssp -CBSCCBCCTTSCTTEEEEESSSEEEEEEETTTEEEECGGGTSCTTC-----CCCCEEESCSBHHHHHHHCCCCEEEEEE
T ss_pred cccCCEECCCCCCCCeEeeccCCCcceEEecCCEEEecCCEEEeCCcccCCCceEEEEeccccccccccccceeeEEEEE
Confidence 56666666667889987654456799999999999999999973 234566663211 1122333333
Q ss_pred cc----------CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC-----ceeEEEEEEeceeeec
Q 007213 193 GT----------ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEILS 253 (612)
Q Consensus 193 d~----------~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-----~~sv~~GiIs~~~~~~ 253 (612)
++ .+|||||+++.+ .+...+.|+.|.... ..|..+++.||..... ...+..-+++...|..
T Consensus 169 Hp~y~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~ 248 (329)
T 1md8_A 169 HPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACEN 248 (329)
T ss_dssp CSSCCSSCTTCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHH
T ss_pred CCCcccccCCCCCccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHH
Confidence 32 359999999865 345678999998643 4588899999865422 1122333343333322
Q ss_pred ccC-----CceeeeEEEEc-----cCCCCCCCCCeEecC---CC--eEEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 254 YVH-----GSTELLGLQID-----AAINSGNSGGPAFND---KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 254 ~~~-----~~~~~~~i~~d-----a~i~~G~SGGPlvn~---~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
... ......+|+.. ...|.|+|||||+.. +| .++||++.+.... .+.+...-+.....++++.
T Consensus 249 ~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~--~~~gvyT~V~~y~~WI~~~ 326 (329)
T 1md8_A 249 WLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCS--RGYGFYTKVLNYVDWIKKE 326 (329)
T ss_dssp HHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSS--SSCEEEEEGGGTHHHHHHH
T ss_pred HhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcC--CCCcEEEEHHHHHHHHHHH
Confidence 110 01112346652 357899999999863 23 4899999865322 1234455555566666554
Q ss_pred H
Q 007213 319 E 319 (612)
Q Consensus 319 ~ 319 (612)
.
T Consensus 327 i 327 (329)
T 1md8_A 327 M 327 (329)
T ss_dssp H
T ss_pred H
Confidence 3
No 121
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.24 E-value=6.5e-11 Score=127.28 Aligned_cols=193 Identities=16% Similarity=0.171 Sum_probs=121.7
Q ss_pred EEEeeeeCCCCCCcccccCCcceEEEEEEEeCCEEEecccccCC----CCeEEEEEcCC------CcEEEEEEEEecc--
Q 007213 127 KVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEH----YTQVKLKKRGS------DTKYLATVLAIGT-- 194 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~----~~~i~V~~~~~------g~~~~a~vv~~d~-- 194 (612)
+|..........+||+........|+|.+|++.||||+|||+.+ ...+.|.+... ...+..+-+..++
T Consensus 161 rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y 240 (403)
T 1zjk_A 161 QIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGY 240 (403)
T ss_dssp CCSSCEECCTTSSTTEEEEEESCCEEEEEETTTEEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTTC
T ss_pred cccCCcCCCCCCcCCEeEeccCCceEEEEecCCEEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCCC
Confidence 56666666777899987655456799999999999999999964 45677877421 1234444344432
Q ss_pred ------CCCeEEEEeccc-cccCCeeeeEcCCCC-----CCCCeEEEEEeCCCCC------ceeEEEEEEeceeeecccC
Q 007213 195 ------ECDIAMLTVEDD-EFWEGVLPVEFGELP-----ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVH 256 (612)
Q Consensus 195 ------~~DLAlLkv~~~-~~~~~l~pl~l~~~~-----~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~~~~~ 256 (612)
.+||||||++.+ .+...+.|+.|.... ..|+.+++.||..... ...+..-+++...+.....
T Consensus 241 ~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~~~~ 320 (403)
T 1zjk_A 241 THDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYE 320 (403)
T ss_dssp CTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHHHTT
T ss_pred CCCCCCcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhhhhh
Confidence 469999999875 345678999997532 3588999999875422 1233444555444432211
Q ss_pred C------ceeeeEEEEc-----cCCCCCCCCCeEecC---CC--eEEEEEecc-cCCCccceeecccChhhHHHHHHHHH
Q 007213 257 G------STELLGLQID-----AAINSGNSGGPAFND---KG--KCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 257 ~------~~~~~~i~~d-----a~i~~G~SGGPlvn~---~G--~VIGI~~~~-~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
. .....+|++. ...+.|+|||||+.. +| .++||++.+ ..-......+...-+.....++++..
T Consensus 321 ~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~i 400 (403)
T 1zjk_A 321 KPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 400 (403)
T ss_dssp SSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHHH
T ss_pred ccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 1 1122356652 367899999999864 34 599999975 22211122344555666666666544
No 122
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=99.23 E-value=6.6e-11 Score=136.46 Aligned_cols=189 Identities=12% Similarity=0.029 Sum_probs=109.4
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNIT 429 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~ 429 (612)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++. ..|+.+.|+|.|+|+.....+.
T Consensus 183 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~~~~v~l~V~R~g~~~~~~~~ 252 (721)
T 2xkx_A 183 DNSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHED--------AVAALK--NTYDVVYLKVAKPSNAYLSDSY 252 (721)
T ss_pred CCceEEEEeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCcccccCCC
Confidence 46999999999999999 9 9999999999999999975321 223333 3478899999999976543321
Q ss_pred eccCccccCCC--CCC---CCCCcee---------eccEEEeecCchhhhhhHHhhccHHHHHHhCCccc--ccccccch
Q 007213 430 LATHRRLIPSH--NKG---RPPSYYI---------IAGFVFSRCLYLISVLSMERIMNMKLRSSFWTSSC--IQCHNCQM 493 (612)
Q Consensus 430 l~~~~~~~~~~--~~~---~~p~~~~---------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 493 (612)
..+...... ... ..+++.. ...-.+.+.. . ..++.... ....+.+.
T Consensus 253 --~~p~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-------------~---~~~~~~~~~~~~~~v~l~ 314 (721)
T 2xkx_A 253 --APPDITTSYSQHLDNEISHSSYLGTDYPTAMTPTSPRRYSPVA-------------K---DLLGEEDIPREPRRIVIH 314 (721)
T ss_pred --CCCCcccCCCCCcccccCCcccccccccccCCCCCCcccCCcc-------------c---ccccccccccceEEEEEE
Confidence 110000000 000 0000000 0000000000 0 00000000 00000000
Q ss_pred hhhhhhccCCccccccchhhhhcccCCCCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCC
Q 007213 494 SSLLWCLRSPLCLNCFNKVFLLSLSLTFSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDE 570 (612)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~ 570 (612)
. .. . -|. |.+.......+++|.+|.++++|..+| ++.||+|++|||++|.+ ++++.++|++. ++
T Consensus 315 -~---~~--~----~lG--~~i~~~~~~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l~~~-~~ 381 (721)
T 2xkx_A 315 -R---GS--T----GLG--FNIVGGEDGEGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNA-GQ 381 (721)
T ss_pred -E---CC--C----Ccc--EEEeccCCCCCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHHHhc-CC
Confidence 0 00 0 000 000000013579999999999999999 99999999999999987 89999999975 67
Q ss_pred eEEEEEeCCeE
Q 007213 571 FLKFDLEYDQV 581 (612)
Q Consensus 571 ~~~l~~~r~~~ 581 (612)
.++|.+.|+..
T Consensus 382 ~v~L~v~r~~~ 392 (721)
T 2xkx_A 382 TVTIIAQYKPE 392 (721)
T ss_pred eEEEEEEeCch
Confidence 78898887754
No 123
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.23 E-value=5.7e-11 Score=121.71 Aligned_cols=182 Identities=16% Similarity=0.099 Sum_probs=113.0
Q ss_pred CCcccccC---CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC-----CCcEEEEEEEEecc-------CCCeEEEE
Q 007213 138 SLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG-----SDTKYLATVLAIGT-------ECDIAMLT 202 (612)
Q Consensus 138 ~~p~~~~~---~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~-----~g~~~~a~vv~~d~-------~~DLAlLk 202 (612)
.+||+... .....|+|.+|++.||||+|||+.+...+.|.+.. ....+..+-+..++ .+|||||+
T Consensus 63 ~~Pw~v~l~~~~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~nDIALl~ 142 (283)
T 3f1s_B 63 DLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLE 142 (283)
T ss_dssp CCTTEEEEECTTSCEEEEEEEEETTEEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEECTTCBTTTTBTCCEEEE
T ss_pred ccCCEEEEEecCCCeeeccEEecCCEEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEECCCCCCCCCCCCEEEEE
Confidence 45666432 23568999999999999999999887778888742 23344444455544 46999999
Q ss_pred eccc-cccCCeeeeEcCCCC------CCCCeEEEEEeCCCCC-----ceeEEEEEEeceeeecccCCceeeeEEEEc--c
Q 007213 203 VEDD-EFWEGVLPVEFGELP------ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEILSYVHGSTELLGLQID--A 268 (612)
Q Consensus 203 v~~~-~~~~~l~pl~l~~~~------~~G~~V~aiG~p~g~~-----~~sv~~GiIs~~~~~~~~~~~~~~~~i~~d--a 268 (612)
++.+ .+...+.|+.|.... ..|..+++.||..... ...+..-+++...+...........+|+.. .
T Consensus 143 L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 222 (283)
T 3f1s_B 143 LEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCERSSV 222 (283)
T ss_dssp ESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHHHTSCCCTTEEEEECSS
T ss_pred eCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhhhcCCCCCCeEcccCCC
Confidence 9865 345678999998632 4588899999875211 112334444444443221111112344442 2
Q ss_pred CCCCCCCCCeEecC-CCe--EEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 269 AINSGNSGGPAFND-KGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 269 ~i~~G~SGGPlvn~-~G~--VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
....|+|||||+.. +|+ ++||++... .......+...-+.....++++..+
T Consensus 223 ~~~~gDSGgPlv~~~~~~~~l~GIvS~g~-c~~~~~p~vyt~V~~y~~WI~~~~~ 276 (283)
T 3f1s_B 223 AAMHWMDGSVVTREHRGSWFLTGVLGSQP-VGGQAHMVLVTKVSRYSLWFKQIMN 276 (283)
T ss_dssp CGGGBCTTCEEEEECSSCEEEEEEECCCS-GGGCSSEEEEEEGGGGHHHHHHHHT
T ss_pred CCCCCCCCCcEEEEECCEEEEEEEEEeCC-CCCCCcceEEEEhHHhHHHHHHHhh
Confidence 34468999999965 455 999998632 1111223455666666777766554
No 124
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.20 E-value=1.2e-10 Score=123.07 Aligned_cols=192 Identities=16% Similarity=0.195 Sum_probs=119.3
Q ss_pred EEEEeeeeCCCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCCC-----------eEEEEEcCCCcEEEEEEEEe
Q 007213 126 VKVFCVHTEPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYT-----------QVKLKKRGSDTKYLATVLAI 192 (612)
Q Consensus 126 V~I~~~~~~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~~-----------~i~V~~~~~g~~~~a~vv~~ 192 (612)
-||..........+||+... .....|+|.+|++.||||+||||.... ...+.. ...+.+..+-+..
T Consensus 101 ~RIvGG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~-~~~~~~~V~~i~~ 179 (347)
T 4f4o_C 101 QRIMGGSLDAKGSFPWQAKMISHHNLTSGATLINEQWLLTTAKNLRLGHKNDTKAKDIAPTLRLYV-GKKQEVEIEKVIF 179 (347)
T ss_dssp --CCSCCBCCSCCCTTCEEEECTTCCEEECCBCSSSEEEECHHHHTTTSCTTCCHHHHGGGCEEEE-TTTEEECEEEEEE
T ss_pred CeEECCEECCCCCCCcEEEEEeCCCEEEEEEEEcCCEEEeCcccccCCCCCcceEEeeeeeeeecC-CCeEEEEEEEEEE
Confidence 46777777777788998642 344689999999999999999996421 223333 2445555555556
Q ss_pred ccC---CCeEEEEeccc-cccCCeeeeEcCCC--CCCCCeEEEEEeCCCCC------ceeEEEEEEeceeeecccCC---
Q 007213 193 GTE---CDIAMLTVEDD-EFWEGVLPVEFGEL--PALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYVHG--- 257 (612)
Q Consensus 193 d~~---~DLAlLkv~~~-~~~~~l~pl~l~~~--~~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~~~~~~--- 257 (612)
++. +||||||++.+ .+.+.+.|+.|... ...|...++.||..... ...+..-+++...+......
T Consensus 180 HP~y~~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~ 259 (347)
T 4f4o_C 180 HPDNSTVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTV 259 (347)
T ss_dssp CSCTTTCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSS
T ss_pred CcCCCCCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhccccc
Confidence 654 69999999865 45667899999753 35588899999864321 12344555554444221100
Q ss_pred --------------ceeeeEEEEc-----cCCCCCCCCCeEecC---CCe--EEEEEecccCCCccceeecccChhhHHH
Q 007213 258 --------------STELLGLQID-----AAINSGNSGGPAFND---KGK--CVGIAFQSLKHEDVENIGYVIPTPVIMH 313 (612)
Q Consensus 258 --------------~~~~~~i~~d-----a~i~~G~SGGPlvn~---~G~--VIGI~~~~~~~~~~~~~~~aIPi~~i~~ 313 (612)
.....+|+.. ...|.|+|||||+-. +|+ ++||++.+..- +....+...-+...+.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C-~~~~pgVYTrVs~y~~ 338 (347)
T 4f4o_C 260 PEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSC-RTAEYGVYVRVTSILD 338 (347)
T ss_dssp GGGCCCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCT-TTSSCEEEEEHHHHHH
T ss_pred cccccccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCC-CCCCCeEEEEHHHHHH
Confidence 0111345542 357899999999842 343 89999975432 2222344455666666
Q ss_pred HHHHHH
Q 007213 314 FIQDYE 319 (612)
Q Consensus 314 ~l~~l~ 319 (612)
++++.+
T Consensus 339 WI~~~i 344 (347)
T 4f4o_C 339 WIQTTI 344 (347)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 125
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.20 E-value=2.4e-10 Score=115.94 Aligned_cols=194 Identities=15% Similarity=0.170 Sum_probs=110.9
Q ss_pred EEEeeeeCCCCCCcccccC-------CcceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEE
Q 007213 127 KVFCVHTEPNFSLPWQRKR-------QYSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLAT 188 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~-------~~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~ 188 (612)
+|..........+||+... .....|+|.+|++.||||+||||.+. ..+.|.+.. .+..+..+
T Consensus 23 rIvgG~~a~~~~~Pw~v~l~~~~~~~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~ 102 (276)
T 2vnt_A 23 KIIGGEFTTIENQPWFAAIYRRHRGGSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVE 102 (276)
T ss_dssp -CCSSEECCGGGSTTEEEEEEECSSSCEEEEEEEEEEETTEEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEE
T ss_pred cEECCEECCCCCCCcEEEEEEecCCCcceeEEEEEEeeCCEEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEE
Confidence 3444444444455665321 12357999999999999999999753 345555521 12334444
Q ss_pred EEEecc---------CCCeEEEEeccc-----cccCCeeeeEcCCC---CCCCCeEEEEEeCCCCC--------ceeEEE
Q 007213 189 VLAIGT---------ECDIAMLTVEDD-----EFWEGVLPVEFGEL---PALQDAVTVVGYPIGGD--------TISVTS 243 (612)
Q Consensus 189 vv~~d~---------~~DLAlLkv~~~-----~~~~~l~pl~l~~~---~~~G~~V~aiG~p~g~~--------~~sv~~ 243 (612)
-+..++ ..|||||++... .+...+.|+.|... ...|..+.+.|+..+.. ...+..
T Consensus 103 ~i~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~ 182 (276)
T 2vnt_A 103 NLILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVV 182 (276)
T ss_dssp EEEECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEE
T ss_pred EEEEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeee
Confidence 444433 369999999743 23456788888653 34588888888765321 112334
Q ss_pred EEEeceeeecccCCc--eeeeEEEE-----ccCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHH
Q 007213 244 GVVSRIEILSYVHGS--TELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMH 313 (612)
Q Consensus 244 GiIs~~~~~~~~~~~--~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~ 313 (612)
-+++...|....... .....+.. ....|.|+|||||+.. +| .++||++.+........-+...-+...+.
T Consensus 183 ~i~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~ 262 (276)
T 2vnt_A 183 KLISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLP 262 (276)
T ss_dssp EEECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHH
T ss_pred eEecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHH
Confidence 445544443221111 11112222 2357899999999954 44 49999998653222222234455666667
Q ss_pred HHHHHHH
Q 007213 314 FIQDYEK 320 (612)
Q Consensus 314 ~l~~l~~ 320 (612)
++++..+
T Consensus 263 WI~~~~~ 269 (276)
T 2vnt_A 263 WIRSHTK 269 (276)
T ss_dssp HHHHHHS
T ss_pred HHHHHhh
Confidence 7766553
No 126
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.20 E-value=1.7e-10 Score=123.78 Aligned_cols=195 Identities=15% Similarity=0.141 Sum_probs=120.5
Q ss_pred EEEee-eeCCCCCCcccccC----------CcceEEEEEEEeCCEEEecccccCCC----CeEEEEEcCC----------
Q 007213 127 KVFCV-HTEPNFSLPWQRKR----------QYSSSSSGFAIGGRRVLTNAHSVEHY----TQVKLKKRGS---------- 181 (612)
Q Consensus 127 ~I~~~-~~~~~~~~p~~~~~----------~~~~~GSGfiI~~g~ILT~aHvV~~~----~~i~V~~~~~---------- 181 (612)
+|... .......+||.... .....|+|.+|++.||||+|||+.+. ..+.|.+...
T Consensus 129 rIvgG~~~a~~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~ 208 (394)
T 2b9l_A 129 KITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLP 208 (394)
T ss_dssp EEESCSSBCCTTSSTTEEEEEECC------CCSEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSSC
T ss_pred eeeCCccccCCCCCCcEEEEeeccccccccccceEeeEEEEeCCEEEeccceecCCCCCcccEEEEeceeeccCCcCCCc
Confidence 67776 56666788888532 12468999999999999999999753 4578887421
Q ss_pred CcEEEEEEEEecc-------CCCeEEEEeccc-cccCCeeeeEcCCCC--CCCCeEEEEEeCCCCC---------ceeEE
Q 007213 182 DTKYLATVLAIGT-------ECDIAMLTVEDD-EFWEGVLPVEFGELP--ALQDAVTVVGYPIGGD---------TISVT 242 (612)
Q Consensus 182 g~~~~a~vv~~d~-------~~DLAlLkv~~~-~~~~~l~pl~l~~~~--~~G~~V~aiG~p~g~~---------~~sv~ 242 (612)
...+..+-+..++ .+|||||+++.+ .+.+.+.|+.|.... ..+..+++.||..... ...+.
T Consensus 209 ~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~ 288 (394)
T 2b9l_A 209 YQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQ 288 (394)
T ss_dssp CEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEE
T ss_pred cEEEEEEEEEECCCCCCCccccceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEE
Confidence 1233444444444 369999999865 345578999997633 2478899999864321 12233
Q ss_pred EEEEeceeeecccC----C---ceeeeEEEEc----cCCCCCCCCCeEecC----CC--eEEEEEecccCCCccceeecc
Q 007213 243 SGVVSRIEILSYVH----G---STELLGLQID----AAINSGNSGGPAFND----KG--KCVGIAFQSLKHEDVENIGYV 305 (612)
Q Consensus 243 ~GiIs~~~~~~~~~----~---~~~~~~i~~d----a~i~~G~SGGPlvn~----~G--~VIGI~~~~~~~~~~~~~~~a 305 (612)
.-+++...+..... + .....+|+.. ...|.|+|||||+.. +| .++||++.+........-+..
T Consensus 289 v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~~~PgVY 368 (394)
T 2b9l_A 289 LPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVY 368 (394)
T ss_dssp ECEECHHHHHHHHHTTTTCTTCCCCTTEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBSSSCEEE
T ss_pred EEEECHHHHHHHHhhcccccceecCCCEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCCCCCeEE
Confidence 44555444432110 0 0111345552 367899999999953 23 589999986532211223444
Q ss_pred cChhhHHHHHHHHHHc
Q 007213 306 IPTPVIMHFIQDYEKN 321 (612)
Q Consensus 306 IPi~~i~~~l~~l~~~ 321 (612)
.-+...+.++++..+.
T Consensus 369 T~V~~y~~WI~~~i~~ 384 (394)
T 2b9l_A 369 ANVAHFRNWIDQEMQA 384 (394)
T ss_dssp EEGGGGHHHHHHHHHH
T ss_pred EEHHHhHHHHHHHHHh
Confidence 5556666666665543
No 127
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.20 E-value=3.1e-11 Score=105.17 Aligned_cols=101 Identities=14% Similarity=0.194 Sum_probs=81.5
Q ss_pred hhhHHHHHHHHHHcCcccCCCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCC
Q 007213 308 TPVIMHFIQDYEKNGAYTGFPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN 386 (612)
Q Consensus 308 i~~i~~~l~~l~~~g~v~~~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s 386 (612)
.+.++++.+++.++++.. ++++|+..... . + ...|++|..+.|+|||++ ||++||+|++|||++|.+
T Consensus 4 ~~~~~~~~~~l~~~~~~~-~~~~g~~~~~~-~-------~---~~~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~ 71 (105)
T 2i4s_A 4 EDKVDAIREAIARNPQEI-FQYVRLSQVKR-D-------D---KVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTD 71 (105)
T ss_dssp HHHHHHHHHHHHHSGGGH-HHHEEEEEEEE-T-------T---EEEEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTS
T ss_pred hHHHHHHHHHHHHCHHHH-HhhceeEEEec-C-------C---cEEEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCC
Confidence 356788899999999888 88888876432 1 1 023777778888888899 999999999999999999
Q ss_pred CCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEe
Q 007213 387 DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 430 (612)
Q Consensus 387 ~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l 430 (612)
|.++ ..++.....|+.+.|+|.|+|+.+++.++|
T Consensus 72 ~~d~----------~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 105 (105)
T 2i4s_A 72 PNVM----------NTLFQSMNEMTEMSLTVERDGQQHDVYIQF 105 (105)
T ss_dssp TTHH----------HHHHHHHTTCSEEEEEEEETTEEEEEEEEC
T ss_pred HHHH----------HHHHHhcCCCCeEEEEEEECCEEEEEEEeC
Confidence 9985 366666678899999999999988887764
No 128
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.20 E-value=3e-10 Score=111.96 Aligned_cols=162 Identities=15% Similarity=0.062 Sum_probs=94.2
Q ss_pred ceEEEEEEEe---CCEEEecccccCCC------CeEEEEEcCC-C----cEEEEEEEEec--------cCCCeEEEEecc
Q 007213 148 SSSSSGFAIG---GRRVLTNAHSVEHY------TQVKLKKRGS-D----TKYLATVLAIG--------TECDIAMLTVED 205 (612)
Q Consensus 148 ~~~GSGfiI~---~g~ILT~aHvV~~~------~~i~V~~~~~-g----~~~~a~vv~~d--------~~~DLAlLkv~~ 205 (612)
...|+|.+|+ +.||||+|||+.+. ..+.|..... . ..+..+-+..+ ..+||||||++.
T Consensus 20 ~~~CgGslI~s~s~~~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~DiAll~L~~ 99 (218)
T 3cp7_A 20 DFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVTSAEWANRGDFEHDYAFAVLET 99 (218)
T ss_dssp EEEEEEEEBCCTTSCEEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEEEEEEECHHHHHHCCGGGCCEEEEECC
T ss_pred CeEEEEEEEecCCCCEEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEEEEEEECcccccCCCCcCCEEEEEEeC
Confidence 4589999998 99999999999653 2456655321 1 13344333332 357999999987
Q ss_pred c---cccCCee-eeEcCCCCCCCCeEEEEEeCCCCCceeEEEEEEeceeeec--ccC--CceeeeEEEEccCCCCCCCCC
Q 007213 206 D---EFWEGVL-PVEFGELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILS--YVH--GSTELLGLQIDAAINSGNSGG 277 (612)
Q Consensus 206 ~---~~~~~l~-pl~l~~~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~--~~~--~~~~~~~i~~da~i~~G~SGG 277 (612)
+ .+.+.+. ++.|......|..+++.||+........ .+ ..|.. ... ......++ |+.+.|+|||
T Consensus 100 ~~~~~~~~~v~~~~~l~~~~~~g~~~~v~GwG~~~~~~~~---~l--~~C~~~~~~~~~~~~~~~~~---Ca~~~GDSGG 171 (218)
T 3cp7_A 100 KGGTTVQQQVGTASPIAFNQPRGQYYSAYGYPAAAPFNGQ---EL--HSCHGTATNDPMGSSTQGIP---CNMTGGSSGG 171 (218)
T ss_dssp BTTBCHHHHHSCCBCBCCSCCSSCEEEEEECCCSTTCCSS---SC--EEEEEECEECTTSSSCEEEE---CCCCTTCTTC
T ss_pred CCCcChhHhcCcccceeecCCCCCEEEEEeCCCCCCCCCc---ee--eEeeeeEEcCCCCCceEEec---CCCCCCCcCC
Confidence 6 2333344 6666543346889999999964311000 00 11111 000 11111222 3356899999
Q ss_pred eEecC---CCeEEEEEecccCCCccceeecccC-hhhHHHHHHHHH
Q 007213 278 PAFND---KGKCVGIAFQSLKHEDVENIGYVIP-TPVIMHFIQDYE 319 (612)
Q Consensus 278 Plvn~---~G~VIGI~~~~~~~~~~~~~~~aIP-i~~i~~~l~~l~ 319 (612)
||+.. .+.++||++.+... .....|+-. -+.++.+++...
T Consensus 172 Plv~~~~g~~~lvGIvS~G~gc--~~~~~~~p~~~~~~~~l~~~a~ 215 (218)
T 3cp7_A 172 PWFLGNGTGGAQNSTNSYGYTF--LPNVMFGPYFGSGAQQNYNYAS 215 (218)
T ss_dssp EEEESSSSSSCEEEECCEEETT--EEEEEEECCCCHHHHHHHHHHT
T ss_pred eeEEccCCCeEEEEEEccccCC--CCCcEEcCcCCHHHHHHHHHHH
Confidence 99965 37899999986532 223333332 256777766653
No 129
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.19 E-value=1.2e-10 Score=124.95 Aligned_cols=191 Identities=17% Similarity=0.185 Sum_probs=118.1
Q ss_pred EEEeeeeCCCCCCcccccCCcceEEEEEEEeCCEEEecccccCCC-------CeEEEEEcCC-------CcEEEEEEEEe
Q 007213 127 KVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHY-------TQVKLKKRGS-------DTKYLATVLAI 192 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~~-------~~i~V~~~~~-------g~~~~a~vv~~ 192 (612)
+|..........+||+........|+|.+|++.||||+|||+.+. ..+.|.+... ...+..+-+..
T Consensus 157 rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~ 236 (399)
T 1gpz_A 157 QIIGGQKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSV 236 (399)
T ss_dssp CCCSCEECCTTSSTTEEEEESSSEEEEEEETTTEEEECGGGTSCTTC-----CCCEEEESCSBHHHHHHTCCCCEEEEEE
T ss_pred EEECCEECCCCCCCCEEEECCCCCeEEEEeCCCEEEeChhcccccccccCCcceEEEEeccccccccccccccceEEEEE
Confidence 666777777788999986555567999999999999999999743 2456766321 11222333333
Q ss_pred cc----------CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC-----ceeEEEEEEeceeeec
Q 007213 193 GT----------ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD-----TISVTSGVVSRIEILS 253 (612)
Q Consensus 193 d~----------~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~-----~~sv~~GiIs~~~~~~ 253 (612)
++ .+|||||+++.+ .+...+.|+.|.... ..|..+++.||..... ...+..-+++...+..
T Consensus 237 Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~ 316 (399)
T 1gpz_A 237 HPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACEN 316 (399)
T ss_dssp CSSCCSSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC
T ss_pred CCCCCcCCCCCCCCcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhh
Confidence 32 359999999865 355678999998643 4588899999864321 1233444555444432
Q ss_pred ccCC-----ceeeeEEEEc-----cCCCCCCCCCeEecC---CC--eEEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 254 YVHG-----STELLGLQID-----AAINSGNSGGPAFND---KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 254 ~~~~-----~~~~~~i~~d-----a~i~~G~SGGPlvn~---~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
.... .....+|+.. ...+.|+|||||+.. +| .++||++.+..-. .+.+...-+.....++++.
T Consensus 317 ~~~~~~~~~~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~--~~~~vyt~V~~y~~WI~~~ 394 (399)
T 1gpz_A 317 WLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCS--RGYGFYTKVLNYVDWIKKE 394 (399)
T ss_dssp -----------CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTT--TTEEEEEEGGGGHHHHHHH
T ss_pred hhhcccccCcCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcC--CCCeEEEEhHHhHHHHHHH
Confidence 2110 0112345552 357899999999853 24 5899999865322 1245555666666666654
Q ss_pred H
Q 007213 319 E 319 (612)
Q Consensus 319 ~ 319 (612)
.
T Consensus 395 ~ 395 (399)
T 1gpz_A 395 M 395 (399)
T ss_dssp T
T ss_pred h
Confidence 3
No 130
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.18 E-value=1.7e-10 Score=120.97 Aligned_cols=190 Identities=16% Similarity=0.096 Sum_probs=116.0
Q ss_pred EEEeeeeCCCCCCcccccCCcceEEEEEEEeCCEEEecccccCCCCeEEEEEcCC------CcEEEE---EEEEec----
Q 007213 127 KVFCVHTEPNFSLPWQRKRQYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGS------DTKYLA---TVLAIG---- 193 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~------g~~~~a---~vv~~d---- 193 (612)
+|..........+||+.... ...|+|.+|++.||||+|||+.+.....|.+... ...+.. +-+..+
T Consensus 82 rIvgG~~a~~~~~Pw~v~l~-~~~CgGsLIs~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~ 160 (333)
T 1elv_A 82 RIIGGSDADIKNFPWQVFFD-NPWAGGALINEYWVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWK 160 (333)
T ss_dssp -CBTCEECCGGGSTTEEEEE-TTEEEEEEEETTEEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTSC
T ss_pred eeecCcccCCCCcCeEEEec-CCceeEEEecCCEEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCCc
Confidence 55566666667789987653 3379999999999999999998755445554211 111211 222222
Q ss_pred ----------cCCCeEEEEeccc-cccCCeeeeEcCCCC-----CCCCeEEEEEeCCCCC------ceeEEEEEEeceee
Q 007213 194 ----------TECDIAMLTVEDD-EFWEGVLPVEFGELP-----ALQDAVTVVGYPIGGD------TISVTSGVVSRIEI 251 (612)
Q Consensus 194 ----------~~~DLAlLkv~~~-~~~~~l~pl~l~~~~-----~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~ 251 (612)
..+|||||+++.+ .+...+.|+.|.... ..|+.+++.||..... ...+..-+++...+
T Consensus 161 ~~~~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~C 240 (333)
T 1elv_A 161 LLAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKC 240 (333)
T ss_dssp CCSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHHH
T ss_pred ccccccccCCCcceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHHh
Confidence 2479999999865 345678999997532 2488999999865321 11233444444444
Q ss_pred ecccCC---------ceeeeEEEEc----cCCCCCCCCCeEecC---CC---eEEEEEecccCCCccceeecccChhhHH
Q 007213 252 LSYVHG---------STELLGLQID----AAINSGNSGGPAFND---KG---KCVGIAFQSLKHEDVENIGYVIPTPVIM 312 (612)
Q Consensus 252 ~~~~~~---------~~~~~~i~~d----a~i~~G~SGGPlvn~---~G---~VIGI~~~~~~~~~~~~~~~aIPi~~i~ 312 (612)
...... .....+|+.. ...|.|+|||||+.. +| .++||++.+.... ..+...-+...+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~C~---~~~vyt~V~~y~ 317 (333)
T 1elv_A 241 KEVKVEKPTADAEAYVFTPNMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQCG---TYGLYTRVKNYV 317 (333)
T ss_dssp HTC----------CCCCCTTEEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSSTT---SEEEEEEGGGGH
T ss_pred hhhhhcccccccccccCCCCeECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCCCC---CCcEEeEHHHHH
Confidence 321110 1111345552 357899999999864 23 4999999865322 145566666677
Q ss_pred HHHHHHHH
Q 007213 313 HFIQDYEK 320 (612)
Q Consensus 313 ~~l~~l~~ 320 (612)
.++++..+
T Consensus 318 ~WI~~~~~ 325 (333)
T 1elv_A 318 DWIMKTMQ 325 (333)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77766554
No 131
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.17 E-value=4.4e-10 Score=121.12 Aligned_cols=190 Identities=18% Similarity=0.181 Sum_probs=111.4
Q ss_pred eeeeCCCCCCcccccC------CcceEEEEEEEeCCEEEecccccCCC--CeEEEEEcCC-----C--------------
Q 007213 130 CVHTEPNFSLPWQRKR------QYSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRGS-----D-------------- 182 (612)
Q Consensus 130 ~~~~~~~~~~p~~~~~------~~~~~GSGfiI~~g~ILT~aHvV~~~--~~i~V~~~~~-----g-------------- 182 (612)
.........+||.... .....|+|.+|++.||||+|||+.+. ..+.|++... .
T Consensus 121 gG~~a~~~e~Pw~v~L~~~~~g~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c~~~ 200 (408)
T 2xxl_A 121 NGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPP 200 (408)
T ss_dssp SSCBCCTTSSTTEEEEEEECSSSEEEEEEEEEEETTEEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEECCC
T ss_pred CCEECCCCCCCcEEEEEeecCCceeEEEEEEEEECCEEEEcHHhcCCCCCceEEEEeeeeECCCccchhhcccccccCCc
Confidence 3333344456665322 12467999999999999999999753 4677877421 0
Q ss_pred -cEEEEEEEEecc-------CCCeEEEEeccc-cccCCeeeeEcCCC------CCCCCeEEEEEeCCCCC------ceeE
Q 007213 183 -TKYLATVLAIGT-------ECDIAMLTVEDD-EFWEGVLPVEFGEL------PALQDAVTVVGYPIGGD------TISV 241 (612)
Q Consensus 183 -~~~~a~vv~~d~-------~~DLAlLkv~~~-~~~~~l~pl~l~~~------~~~G~~V~aiG~p~g~~------~~sv 241 (612)
..+..+-+..++ .+|||||+++.+ .+.+.+.|+.|... ...|..+++.||..... ...+
T Consensus 201 ~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L~~~ 280 (408)
T 2xxl_A 201 VVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQA 280 (408)
T ss_dssp CEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBCEEE
T ss_pred eEEEeEEEEEeCCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchheEe
Confidence 122333333333 469999999865 34567899999753 24588899999975321 1123
Q ss_pred EEEEEeceeeecccCCceeeeEEEEc----cCCCCCCCCCeE------ecC-CC--eEEEEEecc-cCCCccceeecccC
Q 007213 242 TSGVVSRIEILSYVHGSTELLGLQID----AAINSGNSGGPA------FND-KG--KCVGIAFQS-LKHEDVENIGYVIP 307 (612)
Q Consensus 242 ~~GiIs~~~~~~~~~~~~~~~~i~~d----a~i~~G~SGGPl------vn~-~G--~VIGI~~~~-~~~~~~~~~~~aIP 307 (612)
..-+++...+...........+++.. ...+.|+||||| +.. +| .++||++.+ ..-.....-+...-
T Consensus 281 ~v~iv~~~~C~~~~~~~~~~~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYTr 360 (408)
T 2xxl_A 281 NVPLQPRSACSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTN 360 (408)
T ss_dssp EEEEECHHHHHHHHTSCCCTTEEEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEEE
T ss_pred eeeecCHHHHHHHhcccCCCceEeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEEE
Confidence 34445544443221111112345553 356789999999 533 34 689999986 22211112233445
Q ss_pred hhhHHHHHHHHH
Q 007213 308 TPVIMHFIQDYE 319 (612)
Q Consensus 308 i~~i~~~l~~l~ 319 (612)
+.....++++..
T Consensus 361 Vs~y~~WI~~~i 372 (408)
T 2xxl_A 361 VGEYVQWITDTM 372 (408)
T ss_dssp GGGGHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555566665544
No 132
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.16 E-value=2.1e-10 Score=119.25 Aligned_cols=181 Identities=17% Similarity=0.096 Sum_probs=111.2
Q ss_pred CCCcccccC---CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC-----CCcEEEEEEEEecc-------CCCeEEE
Q 007213 137 FSLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG-----SDTKYLATVLAIGT-------ECDIAML 201 (612)
Q Consensus 137 ~~~p~~~~~---~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~-----~g~~~~a~vv~~d~-------~~DLAlL 201 (612)
..+||+... .....|+|.+|++.||||+|||+.+...+.|.+.. ....+..+-+..++ .+|||||
T Consensus 103 ~~~Pw~v~l~~~~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl 182 (317)
T 3h5c_B 103 QDLPWQVKLTNSEGKDFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLL 182 (317)
T ss_dssp TCCTTEEEEECSSSCEEEEEEEEETTEEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTCBTTTTBSCCEEE
T ss_pred CCCCcEEEEeccCCceeeeeEEeeCCEEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCCCCCCCCCCeEEE
Confidence 356666432 23468999999999999999999877778888742 23345555455554 4699999
Q ss_pred Eeccc-cccCCeeeeEcCCC------CCCCCeEEEEEeCCCCC-----ceeEEEEEEeceeeecccCCceeeeEEEE--c
Q 007213 202 TVEDD-EFWEGVLPVEFGEL------PALQDAVTVVGYPIGGD-----TISVTSGVVSRIEILSYVHGSTELLGLQI--D 267 (612)
Q Consensus 202 kv~~~-~~~~~l~pl~l~~~------~~~G~~V~aiG~p~g~~-----~~sv~~GiIs~~~~~~~~~~~~~~~~i~~--d 267 (612)
+++.+ .+...+.|+.|... ...|+.+++.||..... ...+..-+++...+...........+|.. .
T Consensus 183 ~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~~~ 262 (317)
T 3h5c_B 183 ELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCERSS 262 (317)
T ss_dssp EESSCCCTTTSCCCCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHTCCCCTTEEEEECS
T ss_pred EeCCcccCCCCccceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhcCcCCCceeECCCC
Confidence 99865 34557889988763 24588999999864211 11234445554444322111111123444 2
Q ss_pred cCCCCCCCCCeEecC-CCe--EEEEEecccCCCccceeecccChhhHHHHHHHH
Q 007213 268 AAINSGNSGGPAFND-KGK--CVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDY 318 (612)
Q Consensus 268 a~i~~G~SGGPlvn~-~G~--VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l 318 (612)
.....|+|||||+.. +|+ ++||++.... ......+...-+...+.++++.
T Consensus 263 ~~~~~gDsGgPl~~~~~~~~~l~Gi~S~g~~-~~~~~p~vyt~V~~y~~WI~~~ 315 (317)
T 3h5c_B 263 VAAMHWMDGSVVTREHRGSWFLTGVLGSQPV-GGQAHMVLVTKVSRYSLWFKQI 315 (317)
T ss_dssp CCCCCCCTTCEEEEEETTEEEEEEEECCCCS-SCCTTEEEEEEGGGCHHHHHHH
T ss_pred CCCcCCCCCCCEEEecCCEEEEEEEEEECCC-CCCCcceEEEEhHHhHHHHHHH
Confidence 345689999999965 555 9999976321 1112233445555556665543
No 133
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.16 E-value=6.6e-11 Score=128.26 Aligned_cols=192 Identities=17% Similarity=0.113 Sum_probs=117.3
Q ss_pred EEEeeeeCCCCCCcccccCC----cceEEEEEEEeCCEEEecccccC--------CCCeEEEEEcCC---------CcEE
Q 007213 127 KVFCVHTEPNFSLPWQRKRQ----YSSSSSGFAIGGRRVLTNAHSVE--------HYTQVKLKKRGS---------DTKY 185 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~~----~~~~GSGfiI~~g~ILT~aHvV~--------~~~~i~V~~~~~---------g~~~ 185 (612)
+|..........+||+.... ....|+|.+|++.||||+|||+. ....+.|.+... .+.+
T Consensus 165 RIvgG~~a~~g~~Pw~v~l~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~ 244 (424)
T 3nxp_A 165 RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKIS 244 (424)
T ss_dssp CCCCCEECCTTSCTTEEEEEETTTTEEEEEEEESSSSEEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEE
T ss_pred eeECCEECCCCCCCCEEEEeecCCCCccceeEEEcCCEEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEE
Confidence 67777777788899986432 34689999999999999999994 234577777321 1122
Q ss_pred EEEEEEecc--------CCCeEEEEeccc-cccCCeeeeEcCCCC------CCCCeEEEEEeCCC---------C----C
Q 007213 186 LATVLAIGT--------ECDIAMLTVEDD-EFWEGVLPVEFGELP------ALQDAVTVVGYPIG---------G----D 237 (612)
Q Consensus 186 ~a~vv~~d~--------~~DLAlLkv~~~-~~~~~l~pl~l~~~~------~~G~~V~aiG~p~g---------~----~ 237 (612)
..+-+..++ .+|||||+++.+ .+...+.|+.|.... ..|..+++.||... . .
T Consensus 245 ~V~~ii~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~ 324 (424)
T 3nxp_A 245 MLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV 324 (424)
T ss_dssp CEEEEEECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSB
T ss_pred EEEEEEeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCcc
Confidence 233333332 469999999865 355678899997632 24889999998631 0 1
Q ss_pred ceeEEEEEEeceeeecccCCceeeeEEEEc--------cCCCCCCCCCeEecC---CC--eEEEEEecccCCCccceeec
Q 007213 238 TISVTSGVVSRIEILSYVHGSTELLGLQID--------AAINSGNSGGPAFND---KG--KCVGIAFQSLKHEDVENIGY 304 (612)
Q Consensus 238 ~~sv~~GiIs~~~~~~~~~~~~~~~~i~~d--------a~i~~G~SGGPlvn~---~G--~VIGI~~~~~~~~~~~~~~~ 304 (612)
...+..-+++...+...........+|+.. ...|.|+|||||+.. +| .++||++.+.........+.
T Consensus 325 L~~~~v~ii~~~~C~~~~~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~pgV 404 (424)
T 3nxp_A 325 LQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGF 404 (424)
T ss_dssp CEEEEEEBCCHHHHHHTCSSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTCCSCEE
T ss_pred ceEEEeeEEcHHHhhhhccCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCCCCCEE
Confidence 112334444444443322111222356652 268899999999964 34 58999998653222222333
Q ss_pred ccChhhHHHHHHHH
Q 007213 305 VIPTPVIMHFIQDY 318 (612)
Q Consensus 305 aIPi~~i~~~l~~l 318 (612)
..-+...+.++++.
T Consensus 405 yT~Vs~y~~WI~~~ 418 (424)
T 3nxp_A 405 YTHVFRLKKWIQKV 418 (424)
T ss_dssp EEECTTCHHHHHHH
T ss_pred EEEHHHHHHHHHHH
Confidence 44444444554443
No 134
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.13 E-value=5.6e-10 Score=107.39 Aligned_cols=150 Identities=16% Similarity=0.158 Sum_probs=98.6
Q ss_pred ceEEEEEEEe---CCEEEecccccCCCC-eEEEEEcCCCcEEE-----EEEEEeccCCCeEEEEeccccc-cCCeeeeEc
Q 007213 148 SSSSSGFAIG---GRRVLTNAHSVEHYT-QVKLKKRGSDTKYL-----ATVLAIGTECDIAMLTVEDDEF-WEGVLPVEF 217 (612)
Q Consensus 148 ~~~GSGfiI~---~g~ILT~aHvV~~~~-~i~V~~~~~g~~~~-----a~vv~~d~~~DLAlLkv~~~~~-~~~l~pl~l 217 (612)
...|+|++|. ..+|||++||+.+.. .+... .++..++ ..+-..|+..|||||++++... .-.+.++.|
T Consensus 26 ~h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~~~~~--k~g~~ip~~~~~~~~~~~d~~~D~all~vp~~~~s~lg~~~a~~ 103 (191)
T 1zyo_A 26 TTIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLA--KAGKQVSVEDWEISMSSSDKMLDFAIVRVPTHVWSKLGVKSTPL 103 (191)
T ss_dssp EEEEEEEEEEC--CEEEEECHHHHTSSSCCCEEE--ETTEEEECCSCEEEEEECCTTTCEEEEECCHHHHHHHTCCCCCB
T ss_pred eEEEEEEEEEECCCcEEEEChhhCcCCcceeeec--CCCCEEEcccceeeEccCCCCCcEEEEEcCCChhhhcCcceeEe
Confidence 4579999995 459999999998753 22222 2555544 3343456789999999986421 002455445
Q ss_pred CCCCCCCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCC
Q 007213 218 GELPALQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHE 297 (612)
Q Consensus 218 ~~~~~~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~ 297 (612)
.. ...++.|.++|++..... ....|+....+ .+ ..+++.+...+|.||+|+||. ..||||+.+.-
T Consensus 104 ~~-~~~~~~vt~yg~~~~~~~-~s~~g~~~~~~-----~~----~~~~~~~~T~~G~SGsP~~ng-~~IVGvh~G~~--- 168 (191)
T 1zyo_A 104 VC-PSSKDVITCYGGSSSDCL-MSGVGSSSTSE-----FT----WKLTHTCPTAAGWSGTPLYSS-RGVVGMHVGFE--- 168 (191)
T ss_dssp CC-CCSCEEEEEEEESSTTSE-EEEEEEEEECS-----ST----TEEEECCCCCTTCTTCEEECS-SCEEEEEEEEE---
T ss_pred ec-CCCCccEEEEeecCCCCE-eecccceeecc-----CC----cEEEEEcCCCCCCCCCcEEcC-CeEEEEEeCcc---
Confidence 32 235889999999875442 33344322211 00 257888999999999999997 47889999832
Q ss_pred ccceeecccChhhHHHH
Q 007213 298 DVENIGYVIPTPVIMHF 314 (612)
Q Consensus 298 ~~~~~~~aIPi~~i~~~ 314 (612)
...+.+.++-+..++.+
T Consensus 169 ~~~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 169 EIGKLNRGVNMFYVANY 185 (191)
T ss_dssp ETTTEEEEECHHHHHHH
T ss_pred cCCceeeeeehHHHhhh
Confidence 23456778877777765
No 135
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.13 E-value=1e-10 Score=100.98 Aligned_cols=73 Identities=22% Similarity=0.327 Sum_probs=65.1
Q ss_pred CCccEEEEecCCCcccCCCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEec
Q 007213 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 431 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~ 431 (612)
..|++|..|.++|||++||++||+|++|||++|.+|.++ ...+.....|+.+.|+|.|+|+.+++++++.
T Consensus 6 ~~Gv~V~~V~~~spA~~GL~~GD~I~~Ing~~v~~~~dl----------~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 75 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAADVLHAGDLITEIDGNAFKSSQEF----------IDYIHSKKVGDTVKINYKHGDKNEQADIKLT 75 (100)
T ss_dssp CCCEEEEEECTTSGGGGTCCTTCEEEEETTBCCSSHHHH----------HHHHHTSCTTCEEEEEEEETTEEEEEEEECE
T ss_pred CCCEEEEEeCCCCchHHCCCCCCEEEEECCEECCCHHHH----------HHHHHhCCCCCEEEEEEEECCEEEEEEEEEe
Confidence 469999999999999889999999999999999999884 4667766689999999999999999999987
Q ss_pred cCc
Q 007213 432 THR 434 (612)
Q Consensus 432 ~~~ 434 (612)
.++
T Consensus 76 ~~~ 78 (100)
T 3i18_A 76 AID 78 (100)
T ss_dssp ECS
T ss_pred cCC
Confidence 654
No 136
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.11 E-value=7.1e-10 Score=128.44 Aligned_cols=194 Identities=19% Similarity=0.188 Sum_probs=122.3
Q ss_pred EEEeeeeCCCCCCcccccCC---cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEEEe
Q 007213 127 KVFCVHTEPNFSLPWQRKRQ---YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVLAI 192 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~~---~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv~~ 192 (612)
+|..........+||+.... ....|+|.||++.||||+||||... ..+.|.+.. ..+.+...-+..
T Consensus 561 RIvGG~~a~~~~~PW~VsL~~~~~~~~CGGSLIs~~wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~ 640 (791)
T 4dur_A 561 RVVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFL 640 (791)
T ss_dssp TCTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEE
T ss_pred ceECCEECCCCCCCeEEEEEecCCCeEEEEEEEeCCEEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEEC
Confidence 56677777777899986542 4568999999999999999999753 356677632 112333333344
Q ss_pred cc-CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCC------ceeEEEEEEeceeeeccc--CCce
Q 007213 193 GT-ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGD------TISVTSGVVSRIEILSYV--HGST 259 (612)
Q Consensus 193 d~-~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~------~~sv~~GiIs~~~~~~~~--~~~~ 259 (612)
++ .+|||||+|+.+ .+...+.|+.|.... ..|..+++.||..... ...+..-+++...+.... ....
T Consensus 641 hp~~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i 720 (791)
T 4dur_A 641 EPTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRV 720 (791)
T ss_dssp CTTCCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTCC
T ss_pred CCCCCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCCC
Confidence 43 479999999865 355678899887532 3478899999865321 123445555554443221 1112
Q ss_pred eeeEEEEc-----cCCCCCCCCCeEecCC-C--eEEEEEecccCCCccceeecccChhhHHHHHHHHHH
Q 007213 260 ELLGLQID-----AAINSGNSGGPAFNDK-G--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYEK 320 (612)
Q Consensus 260 ~~~~i~~d-----a~i~~G~SGGPlvn~~-G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~~ 320 (612)
...+|... ...+.|+|||||+..+ | .++||++.+..-.....-+...-+.....++++.++
T Consensus 721 ~~~~iCAg~~~gg~daC~GDSGGPLv~~~~~~~~LvGIvS~G~gC~~~~~PgVYTrVs~y~dWI~~~i~ 789 (791)
T 4dur_A 721 QSTELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR 789 (791)
T ss_dssp CTTEEEESCSSSCCCBCCSCTTCEEEEEETTEEEEEEECCTTTCCBBTTBCEEEEEGGGTHHHHHHHHH
T ss_pred CCCeEEeccCCCCCCCCCCCcccceEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHH
Confidence 22345542 3568899999999653 3 599999986532222223455566666666666543
No 137
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.09 E-value=5.7e-11 Score=108.95 Aligned_cols=101 Identities=18% Similarity=0.181 Sum_probs=69.9
Q ss_pred HcCcccCCCcCCeEEeeecChhh-HHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCC--CCCCccccC
Q 007213 320 KNGAYTGFPLLGVEWQKMENPDL-RVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHG 395 (612)
Q Consensus 320 ~~g~v~~~~~lGi~~~~~~~~~~-~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s--~~~v~~~~~ 395 (612)
+.+++. +++||+.+....+.+. .+.+++.....|++|..|.++|||++ ||++||+|++|||++|.+ +.+
T Consensus 31 ~~~~~~-~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~------ 103 (139)
T 2vz5_A 31 KLRQGE-NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQ------ 103 (139)
T ss_dssp CEEETT-EEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH------
T ss_pred EcCCCC-cccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHH------
Confidence 345554 7899999865212221 23455444467999999999999999 999999999999999995 344
Q ss_pred ccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEecc
Q 007213 396 ERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 432 (612)
Q Consensus 396 ~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~~ 432 (612)
+..++.. ..|+.+.|+|.|+|+..++.+.+..
T Consensus 104 ----~~~~l~~-~~g~~v~l~v~R~g~~~~v~~~~~~ 135 (139)
T 2vz5_A 104 ----ARKRLTK-RSEEVVRLLVTRQSLQKAVQQSMLS 135 (139)
T ss_dssp ----HHHHHCC-TTCSEEEEEEEECC-------CCCC
T ss_pred ----HHHHHHh-CCCCEEEEEEEECCEEEEEEEeece
Confidence 3355555 6789999999999998887776654
No 138
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.06 E-value=1.2e-10 Score=99.48 Aligned_cols=73 Identities=29% Similarity=0.406 Sum_probs=64.4
Q ss_pred CCccEEEEecCCCcccCCCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEec
Q 007213 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 431 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~ 431 (612)
..|++|..|.++|||++||++||+|++|||++|.++.++ ..++.....|+.+.|+|.|+|+.+++++++.
T Consensus 4 ~~Gv~V~~V~~~spA~~GL~~GD~Il~InG~~v~~~~~l----------~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 73 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAGRLEAGDRIAAIDGQPINTSEQI----------VSYVREKQAGDRVRVTFIRDRKQHEAELVLK 73 (94)
T ss_dssp CCCEECCCCCTTSTTBTTBCTTCEEEEETTBCCCCHHHH----------HHHHHHSCTTCCEEEEEEETTEEEEEEECCC
T ss_pred CCcEEEEEECCCChHHhCCCCCCEEEEECCEECCCHHHH----------HHHHHhCCCCCEEEEEEEECCEEEEEEEEEe
Confidence 568999999999999889999999999999999998774 4667766689999999999999999999887
Q ss_pred cCc
Q 007213 432 THR 434 (612)
Q Consensus 432 ~~~ 434 (612)
..+
T Consensus 74 ~~~ 76 (94)
T 2kl1_A 74 PFP 76 (94)
T ss_dssp BCS
T ss_pred eCC
Confidence 654
No 139
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.06 E-value=3.6e-11 Score=102.09 Aligned_cols=72 Identities=24% Similarity=0.332 Sum_probs=63.4
Q ss_pred CccEEEEecCCCcccCCCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEecc
Q 007213 353 KGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 432 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~~ 432 (612)
.|++|..|.++|||++||++||+|++|||++|.++.++ ..++....+|+++.|+|.|+|+.+++++++..
T Consensus 1 ~Gv~V~~V~~~spA~~GL~~GD~I~~InG~~v~~~~~l----------~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 70 (91)
T 2kjp_A 1 NGIYASSVVENMPAKGKIEVGDKIISADGKNYQSAEKL----------IDYISSKKAGDKVTLKIEREEKEKRVTLTLKQ 70 (91)
T ss_dssp CCSSCCCCCCSSCCSSCCCSSCEEEEETTBCCSSHHHH----------HHHHSSCCSSCEECEEEESSSCEECCCEECCC
T ss_pred CceEEEEECCCChHHHcCCCCCEEEEECCEECCCHHHH----------HHHHHcCCCCCEEEEEEEECCEEEEEEEEEec
Confidence 37889999999999889999999999999999998774 46676666899999999999999999999876
Q ss_pred Cc
Q 007213 433 HR 434 (612)
Q Consensus 433 ~~ 434 (612)
.+
T Consensus 71 ~~ 72 (91)
T 2kjp_A 71 FP 72 (91)
T ss_dssp CT
T ss_pred cC
Confidence 54
No 140
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.00 E-value=2.4e-10 Score=95.97 Aligned_cols=68 Identities=16% Similarity=0.257 Sum_probs=58.5
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEe
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 430 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l 430 (612)
.|++|..+.|+|||++ ||++||+|++|||++|.+|.++ ..++.....|+.+.++|.|+|+..++.+++
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~----------~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 87 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVM----------NTLFQSMNEMTEMSLTVERDGQQHDVYIQF 87 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHH----------HHHHHTGGGCSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHH----------HHHHHhcCCCCEEEEEEEECCEEEEEEEEC
Confidence 3788888888889999 9999999999999999999884 366666667899999999999988887764
No 141
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.00 E-value=2e-10 Score=98.20 Aligned_cols=71 Identities=14% Similarity=0.194 Sum_probs=60.1
Q ss_pred cEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC--EEEEEEEEec
Q 007213 355 VRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS--KILNFNITLA 431 (612)
Q Consensus 355 ~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G--~~~~~~v~l~ 431 (612)
.+|.+|.++|||++ ||++||+|++|||++|.+|.++. ..+.....++.+.++|.|+| ..+++++++.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~----------~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~ 73 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVR----------LQLVDKIGDESTTITVAPFGSDQRRDVKLDLR 73 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHH----------HHHHHTTTCSEEEEEEECTTCCCCEEEEEECT
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHH----------HHHHHhcCCCcEEEEEEECCCCceEEEEEEcc
Confidence 46889999999999 99999999999999999998853 55655555688999999987 5688899998
Q ss_pred cCcc
Q 007213 432 THRR 435 (612)
Q Consensus 432 ~~~~ 435 (612)
.+..
T Consensus 74 ~~~~ 77 (95)
T 3id1_A 74 HWAF 77 (95)
T ss_dssp TCCC
T ss_pred cccc
Confidence 8753
No 142
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=98.98 E-value=1.3e-09 Score=123.85 Aligned_cols=191 Identities=17% Similarity=0.179 Sum_probs=106.1
Q ss_pred EEEeeeeCCCCCCcccccCC-----cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcC--------CCcEEEEEEE
Q 007213 127 KVFCVHTEPNFSLPWQRKRQ-----YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRG--------SDTKYLATVL 190 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~~-----~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~--------~g~~~~a~vv 190 (612)
+|..........+||+.... ....|+|.+|++.||||+|||+.+. ..+.|.+.. ++..+..+-+
T Consensus 387 rIvgG~~a~~~~~Pw~v~L~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~i 466 (625)
T 2f83_A 387 RIVGGTASVRGEWPWQVTLHTTSPTQRHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEI 466 (625)
T ss_dssp CCCSSSSCCTTSSTTEEEEEECSSSSEEEEEEEECSSSEEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEEE
T ss_pred ceECCEECCCCCCCeEEEEEEecCCCcEEEEEEEECCCEEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEEE
Confidence 45555555556777775322 3468999999999999999999753 346777631 1223444444
Q ss_pred Eecc-------CCCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCCCCc-------eeEEEEEEeceeee
Q 007213 191 AIGT-------ECDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIGGDT-------ISVTSGVVSRIEIL 252 (612)
Q Consensus 191 ~~d~-------~~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~~-------~sv~~GiIs~~~~~ 252 (612)
..++ .+|||||+++.+ .+.+.+.|+.|.... ..+..+++.||...... ..+..-+++...+.
T Consensus 467 i~Hp~y~~~~~~nDIALlkL~~pv~~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~ 546 (625)
T 2f83_A 467 IIHDQYKMAESGYDIALLKLETTVNYTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQ 546 (625)
T ss_dssp EECTTCCBTTTBCCCEEEEESSCCCCBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHH
T ss_pred EECCccCcCCccccEEEEEECCcccCCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHH
Confidence 4444 369999999865 345578899987532 35788999998643211 11222233332222
Q ss_pred cccCC-ceeeeEEEE-----ccCCCCCCCCCeEecC-CC--eEEEEEecccCCCccceeecccChhhHHHHHHH
Q 007213 253 SYVHG-STELLGLQI-----DAAINSGNSGGPAFND-KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQD 317 (612)
Q Consensus 253 ~~~~~-~~~~~~i~~-----da~i~~G~SGGPlvn~-~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~ 317 (612)
..... .....+|.. ....+.|+|||||+.. +| .++||++.+..-.....-+...-+...+.++++
T Consensus 547 ~~~~~~~i~~~~iCag~~~~~~d~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyT~V~~y~~WI~~ 620 (625)
T 2f83_A 547 KRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILE 620 (625)
T ss_dssp TTCTTSCCCTTBCCC----------CCCTTCEEEEEETTEEEEEEEEEECCC----CCCCEEEEGGGGHHHHHH
T ss_pred HHhccCCCCCCeEEeecCCCCCcCCCCCcccceEEEECCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHH
Confidence 11111 011112322 2357899999999964 45 599999985422111122333444555555543
No 143
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.97 E-value=1.7e-10 Score=102.35 Aligned_cols=90 Identities=14% Similarity=0.206 Sum_probs=70.0
Q ss_pred HHcCcccCCCcC----CeEEeeecChhhHHhhhccc---CCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCC
Q 007213 319 EKNGAYTGFPLL----GVEWQKMENPDLRVAMSMKA---DQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTV 390 (612)
Q Consensus 319 ~~~g~v~~~~~l----Gi~~~~~~~~~~~~~lgl~~---~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v 390 (612)
.++|++. ++|+ |+.+... +. .+|+.- ...|++|..|.++|||++ ||++||+|++|||++|.++.++
T Consensus 7 ~~~g~v~-r~~l~~~~~v~l~~~-~~----~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~ 80 (117)
T 1uit_A 7 GGERRKD-RPYVEEPRHVKVQKG-SE----PLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQ 80 (117)
T ss_dssp CCCCCSC-CCCSCCCEEEEEECS-SC----CCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHH
T ss_pred cccCccc-cccCCCCEEEEEEeC-CC----CccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH
Confidence 3578887 8999 8888765 32 334321 135899999999999999 9999999999999999998774
Q ss_pred ccccCccchHHHHhhccCCCCEEEEEEEECCEEE
Q 007213 391 PFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (612)
Q Consensus 391 ~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~ 424 (612)
. ..+.....|+.+.|+|.|+++..
T Consensus 81 ~----------~~~~~~~~g~~v~l~v~r~~~~~ 104 (117)
T 1uit_A 81 Q----------ARLIIGQQCDTITILAQYNPHVH 104 (117)
T ss_dssp H----------HHHHTTSCCSEEEEEECCCSCCC
T ss_pred H----------HHHHHHcCCCeEEEEEEECCchh
Confidence 2 33434467899999999988754
No 144
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.92 E-value=6.1e-10 Score=93.79 Aligned_cols=72 Identities=14% Similarity=0.140 Sum_probs=57.3
Q ss_pred CCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEe--CCCCCCccccCccchHHHH
Q 007213 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYL 403 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V--~s~~~v~~~~~~~~~~~~~ 403 (612)
.+++|+.+... ..|++|..|.++|||++ ||++||+|++|||++| .++.++ ..+
T Consensus 16 ~~~lG~~~~~~--------------~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~~ 71 (90)
T 2eaq_A 16 SLDFGFTIKWD--------------IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEW----------EEA 71 (90)
T ss_dssp SSCCSEEEEEE--------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHH----------HHH
T ss_pred CCcccEEEEec--------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHH----------HHH
Confidence 35677766532 45899999999999999 9999999999999999 676663 356
Q ss_pred hhccCCCCEEEEEEEECCE
Q 007213 404 VSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 404 l~~~~~g~~v~l~V~R~G~ 422 (612)
+.....|+++.|+|.|+|+
T Consensus 72 l~~~~~g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 72 MAKAQETGHLVMDVRRYGK 90 (90)
T ss_dssp HHHHHHHTEEEEEEEEEC-
T ss_pred HHhcCCCCEEEEEEEeCCC
Confidence 6554568899999999874
No 145
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.90 E-value=5.1e-09 Score=117.48 Aligned_cols=191 Identities=17% Similarity=0.138 Sum_probs=92.4
Q ss_pred EEEeeeeCCCCCCcccccCC--cceEEEEEEEeCCEEEecccccCCC--CeEEEEEcC---------CCcEEEEEEEEec
Q 007213 127 KVFCVHTEPNFSLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY--TQVKLKKRG---------SDTKYLATVLAIG 193 (612)
Q Consensus 127 ~I~~~~~~~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~--~~i~V~~~~---------~g~~~~a~vv~~d 193 (612)
+|..........+||+.... ....|+|.+|++.||||+|||+.+. ..+.|.+.. ....+..+-+..+
T Consensus 321 rIvgG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~H 400 (565)
T 2xrc_A 321 RIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFH 400 (565)
T ss_dssp -----------CCTTBCEEEESSSCCCCCEEEETTEEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEEC
T ss_pred ceECCEECCCCCCCcEEEEecCCceeeeEEEEeCCEEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEeC
Confidence 56666666777899986532 3357999999999999999999753 345555421 1122333334444
Q ss_pred c-------CCCeEEEEeccccc-----cCCeeeeEcCCCC---CCCCeEEEEEeCCCCCc------eeEEEEEEeceeee
Q 007213 194 T-------ECDIAMLTVEDDEF-----WEGVLPVEFGELP---ALQDAVTVVGYPIGGDT------ISVTSGVVSRIEIL 252 (612)
Q Consensus 194 ~-------~~DLAlLkv~~~~~-----~~~l~pl~l~~~~---~~G~~V~aiG~p~g~~~------~sv~~GiIs~~~~~ 252 (612)
+ .+|||||+++.+.. ...+.|+.|.... ..|+.+++.||...... ..+..-+++. +.
T Consensus 401 p~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~--C~ 478 (565)
T 2xrc_A 401 ENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISN--CS 478 (565)
T ss_dssp TTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSC--TH
T ss_pred CCCCCCcccccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHH--hH
Confidence 3 36999999987531 1246788776432 35889999998653221 0112222221 11
Q ss_pred cccCCcee-eeEEEEc-----cCCCCCCCCCeEecC--CC--eEEEEEecccCCCccceeecccChhhHHHHHHHHH
Q 007213 253 SYVHGSTE-LLGLQID-----AAINSGNSGGPAFND--KG--KCVGIAFQSLKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 253 ~~~~~~~~-~~~i~~d-----a~i~~G~SGGPlvn~--~G--~VIGI~~~~~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
........ ..+|.+. ...+.|+|||||+.. +| .++||++.+..-......+...-+...+.++++..
T Consensus 479 ~~~~~~~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYTrVs~y~~WI~~~i 555 (565)
T 2xrc_A 479 KFYGNRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYHV 555 (565)
T ss_dssp HHHTTSCCTTTEEEEEEC----------CCCEEEEECTTCCEEEEEEECC------CCCCEEEEEGGGGHHHHHHHC
T ss_pred HhhccCcCCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEEEHHHHHHHHHHHh
Confidence 11111111 1134432 357889999999954 34 48999998543211122334455556666665543
No 146
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=98.90 E-value=1.5e-08 Score=103.06 Aligned_cols=131 Identities=13% Similarity=0.162 Sum_probs=73.0
Q ss_pred ceEEEEEEEeC------CEEEecccccCCC----CeEEEEEcC---C---------C--------cE-EEEEEEEeccCC
Q 007213 148 SSSSSGFAIGG------RRVLTNAHSVEHY----TQVKLKKRG---S---------D--------TK-YLATVLAIGTEC 196 (612)
Q Consensus 148 ~~~GSGfiI~~------g~ILT~aHvV~~~----~~i~V~~~~---~---------g--------~~-~~a~vv~~d~~~ 196 (612)
...|+|++|++ .||||+|||+.+. ..+.|.+.. + + .. ....+++....+
T Consensus 33 ~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~~~~~~~~~~~~~~~~v~~~i~h~~~~n 112 (268)
T 1arb_A 33 TLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNTPASGANGDGSMSQTQSGSTVKATYATS 112 (268)
T ss_dssp EEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTSGGGGSCCCCCCCCEEECEEEEEEETTT
T ss_pred ccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCccccccccccccccCCcceEEeccceEecCCCCC
Confidence 46899999986 6999999999752 245666521 0 0 11 223444556679
Q ss_pred CeEEEEeccccccCCeeeeEcCCCCCCCCeEEEEEeCCCCC--------------ceeEEEEEEeceeeecccCCceeee
Q 007213 197 DIAMLTVEDDEFWEGVLPVEFGELPALQDAVTVVGYPIGGD--------------TISVTSGVVSRIEILSYVHGSTELL 262 (612)
Q Consensus 197 DLAlLkv~~~~~~~~l~pl~l~~~~~~G~~V~aiG~p~g~~--------------~~sv~~GiIs~~~~~~~~~~~~~~~ 262 (612)
||||||++.+. + .+..+++.||..... ...+....+.... ..+ .......
T Consensus 113 DIALLrL~~~v-----~---------~~~~~~vsGWG~t~~~~~~~~~~~~~~~~l~~i~~~~~~~~~-~~~-~~~~~~~ 176 (268)
T 1arb_A 113 DFTLLELNNAA-----N---------PAFNLFWAGWDRRDQNYPGAIAIHHPNVAEKRISNSTSPTSF-VAW-GGGAGTT 176 (268)
T ss_dssp TEEEEEESSCC-----C---------GGGCCEEBCEECCSCCCSCEEEEECGGGCSCEEEEECSCCEE-ECT-TSSSCSS
T ss_pred ceEEEEecCCC-----C---------CCCceEEeCcCccCCCCCcceeeccCCcccEEEEeecccccc-ccc-cccccCC
Confidence 99999998752 1 022233333322111 0012222111100 001 1111113
Q ss_pred EEEEc-----cCCCCCCCCCeEecCCCeEEEEEeccc
Q 007213 263 GLQID-----AAINSGNSGGPAFNDKGKCVGIAFQSL 294 (612)
Q Consensus 263 ~i~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~~ 294 (612)
++++. ...+.|+|||||++.+++++||++.+.
T Consensus 177 ~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~ 213 (268)
T 1arb_A 177 HLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGP 213 (268)
T ss_dssp EEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECS
T ss_pred eEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecC
Confidence 44442 247899999999987899999999753
No 147
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=98.90 E-value=3.1e-09 Score=116.87 Aligned_cols=184 Identities=14% Similarity=0.180 Sum_probs=105.5
Q ss_pred CCcccccCC------cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCCCcEEEEEEEEecc--------------
Q 007213 138 SLPWQRKRQ------YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGSDTKYLATVLAIGT-------------- 194 (612)
Q Consensus 138 ~~p~~~~~~------~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~~g~~~~a~vv~~d~-------------- 194 (612)
.+||+.... ....|+|.+|++.||||+|||+... ..+.|.+....+.+..+-+..++
T Consensus 225 ~~Pw~v~l~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~ 304 (497)
T 1rrk_A 225 KQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPE 304 (497)
T ss_dssp HSTTEEEEEECC--CCCEEEEEEECSSSEEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTCCTTTTGGGTCSS
T ss_pred ccCcEEEEEEEcCCCCCceeEEEEecCCEEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCccccccccccccc
Confidence 578875432 3468999999999999999999753 46888885444555554444432
Q ss_pred --CCCeEEEEeccc-cccCCeeeeEcCCCC--------CCCCeEEEEEeCC--------------CCCceeEEEEEEe--
Q 007213 195 --ECDIAMLTVEDD-EFWEGVLPVEFGELP--------ALQDAVTVVGYPI--------------GGDTISVTSGVVS-- 247 (612)
Q Consensus 195 --~~DLAlLkv~~~-~~~~~l~pl~l~~~~--------~~G~~V~aiG~p~--------------g~~~~sv~~GiIs-- 247 (612)
.+|||||+++.+ .+...+.|++|.... ..|..+++.|+.. ......+..-+++
T Consensus 305 ~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~ 384 (497)
T 1rrk_A 305 FYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGD 384 (497)
T ss_dssp CCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECST
T ss_pred cCCCcEEEEEECCCCcCCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCcceeeeEEEecCc
Confidence 369999999865 345678999997531 2244333322211 1011122333443
Q ss_pred -ceeeeccc-----CC-------ceeeeEEEEc-------cCCCCCCCCCeEecC-CC--eEEEEEecccC--CCc---c
Q 007213 248 -RIEILSYV-----HG-------STELLGLQID-------AAINSGNSGGPAFND-KG--KCVGIAFQSLK--HED---V 299 (612)
Q Consensus 248 -~~~~~~~~-----~~-------~~~~~~i~~d-------a~i~~G~SGGPlvn~-~G--~VIGI~~~~~~--~~~---~ 299 (612)
...|.... .. .....+|+.. ...|.|+|||||+.. +| .++||++.+.. ... .
T Consensus 385 ~~~~C~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~~~C~~~~~~ 464 (497)
T 1rrk_A 385 KKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQ 464 (497)
T ss_dssp THHHHHHGGGGSTTCTTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCCC------
T ss_pred ccchhhhhhhhcccccccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEecCCCCCCCcccc
Confidence 12232110 00 1112356653 258899999999965 34 49999998642 110 0
Q ss_pred cee-----ecccChhhHHHHHHHHHHc
Q 007213 300 ENI-----GYVIPTPVIMHFIQDYEKN 321 (612)
Q Consensus 300 ~~~-----~~aIPi~~i~~~l~~l~~~ 321 (612)
.+. +...-+.....++++..+.
T Consensus 465 ~~~P~~~r~vyt~V~~~~~WI~~~~~~ 491 (497)
T 1rrk_A 465 KQVPAHARDFHINLFQVLPWLKEKLQD 491 (497)
T ss_dssp --CCTTCEEEEEEGGGGHHHHHHHTTT
T ss_pred CCCCCccceeeeeHHHHHHHHHHHhCc
Confidence 111 1234466677777766544
No 148
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=98.87 E-value=6.9e-09 Score=119.79 Aligned_cols=192 Identities=14% Similarity=0.169 Sum_probs=107.3
Q ss_pred eeeCCCCCCcccc--c----CCcceEEEEEEEeCCEEEecccccCC---CCeEEEEEcCCCcEEEEEEEEecc-------
Q 007213 131 VHTEPNFSLPWQR--K----RQYSSSSSGFAIGGRRVLTNAHSVEH---YTQVKLKKRGSDTKYLATVLAIGT------- 194 (612)
Q Consensus 131 ~~~~~~~~~p~~~--~----~~~~~~GSGfiI~~g~ILT~aHvV~~---~~~i~V~~~~~g~~~~a~vv~~d~------- 194 (612)
........+||.. . ......|+|.+|++.||||+|||+.. ...+.|.+......+..+-+..++
T Consensus 460 ~~~~~~~~~Pw~~~v~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~~ 539 (741)
T 3hrz_D 460 RKGTDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGK 539 (741)
T ss_dssp ---CCTTTCTTEEEEEECCCC-----EEEEECSSSEEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTTT
T ss_pred CCcccccCcCCeEEEEEEeCCCCCCEEEEEEecCCEEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCcccc
Confidence 3444556799942 1 22446899999999999999999974 456888885455556655555443
Q ss_pred ---------CCCeEEEEeccc-cccCCeeeeEcCCC--------CCCCCeEEEEEeCCCCCc--------------eeEE
Q 007213 195 ---------ECDIAMLTVEDD-EFWEGVLPVEFGEL--------PALQDAVTVVGYPIGGDT--------------ISVT 242 (612)
Q Consensus 195 ---------~~DLAlLkv~~~-~~~~~l~pl~l~~~--------~~~G~~V~aiG~p~g~~~--------------~sv~ 242 (612)
.+|||||+++.+ .+...+.|+.|... ...|..+.+.|+...... ....
T Consensus 540 ~~~~~~~~~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~~~ 619 (741)
T 3hrz_D 540 KEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKE 619 (741)
T ss_dssp GGGTCSCCCTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEE
T ss_pred cccccCCccCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCccccccccccccccccceeccccccccccce
Confidence 359999999765 34567889888742 123444444444321111 1112
Q ss_pred EEEEe---ceeeec-------cc-----CCceeeeEEEEc-------cCCCCCCCCCeEecC-CC--eEEEEEeccc--C
Q 007213 243 SGVVS---RIEILS-------YV-----HGSTELLGLQID-------AAINSGNSGGPAFND-KG--KCVGIAFQSL--K 295 (612)
Q Consensus 243 ~GiIs---~~~~~~-------~~-----~~~~~~~~i~~d-------a~i~~G~SGGPlvn~-~G--~VIGI~~~~~--~ 295 (612)
.-+++ ...+.. +. .......+|++. ...|.|+|||||+.. +| .++||++.+. .
T Consensus 620 v~i~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~ 699 (741)
T 3hrz_D 620 VYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDV 699 (741)
T ss_dssp EEEECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESSCC
T ss_pred eEeecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCCcc
Confidence 22222 111111 00 001112345652 347889999999965 34 3999999865 1
Q ss_pred CCc---ccee-----ecccChhhHHHHHHHHHHcC
Q 007213 296 HED---VENI-----GYVIPTPVIMHFIQDYEKNG 322 (612)
Q Consensus 296 ~~~---~~~~-----~~aIPi~~i~~~l~~l~~~g 322 (612)
-.. .... ++..-+...+.++++..+..
T Consensus 700 C~~~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~~ 734 (741)
T 3hrz_D 700 CKNQKRQKQVPAHARDFHINLFQVLPWLKEKLQDE 734 (741)
T ss_dssp CC------CCCTTCEEEEEEGGGSHHHHHHHTTTS
T ss_pred cCCcccccCCCCCccceEEEhHHhHHHHHHHhcCC
Confidence 111 0112 45566778888888876543
No 149
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.84 E-value=1.7e-09 Score=91.22 Aligned_cols=82 Identities=10% Similarity=0.198 Sum_probs=56.4
Q ss_pred EeeecChhhHHhhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhccCC
Q 007213 334 WQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYT 409 (612)
Q Consensus 334 ~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~~~ 409 (612)
+..+ +++.++.+|+.. ..|++|..|.++|||++ | |++||+|++|||+++. ++.++ ..++.. .
T Consensus 6 v~~~-~~~~~~~~g~~~-~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~ 71 (92)
T 3cyy_A 6 VTLV-KSAKNEEYGLRL-ASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDA----------KTLIER--S 71 (92)
T ss_dssp EEEE-CSSTTSCCCEEE-EEEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHH----------HHHHHT--T
T ss_pred EEEE-eCCCCCCCCEEE-eCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHc--C
Confidence 3344 556667778764 25899999999999999 9 9999999999999999 66553 345544 3
Q ss_pred CCEEEEEEEECCEEEEEEEE
Q 007213 410 GDSAAVKVLRDSKILNFNIT 429 (612)
Q Consensus 410 g~~v~l~V~R~G~~~~~~v~ 429 (612)
++.+.++|.|+|+..++.++
T Consensus 72 ~~~v~l~v~r~g~~~~~~v~ 91 (92)
T 3cyy_A 72 KGKLKMVVQRDERATLLNVP 91 (92)
T ss_dssp TTEEEEEEEC----------
T ss_pred CCcEEEEEEeCCceeeeeCC
Confidence 45899999999987766553
No 150
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.82 E-value=6.5e-09 Score=88.61 Aligned_cols=82 Identities=18% Similarity=0.322 Sum_probs=60.9
Q ss_pred CCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhh
Q 007213 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 405 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~ 405 (612)
.++||+.+..-.... .......|++|..|.++|||++ ||++||+|++|||++|.++.++. ....
T Consensus 13 ~~glG~~i~~g~~~~-----~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~ 77 (97)
T 2w4f_A 13 TGGLGISIAGGKGST-----PYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHE----------AVEA 77 (97)
T ss_dssp TTBSSEEEEECTTSC-----CSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHH
T ss_pred CCceeEEEECCccCC-----cccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHH----------HHHH
Confidence 467888876431100 0111246999999999999999 99999999999999999987742 2223
Q ss_pred ccCCCCEEEEEEEECCEE
Q 007213 406 QKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 406 ~~~~g~~v~l~V~R~G~~ 423 (612)
....|+.+.|+|.|+|+.
T Consensus 78 ~~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 78 LRGAGTAVQMRVWRERET 95 (97)
T ss_dssp HHTSCSEEEEEEECCSSC
T ss_pred HhCCCCeEEEEEEeCCcc
Confidence 334789999999999864
No 151
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.82 E-value=2.3e-09 Score=90.43 Aligned_cols=68 Identities=24% Similarity=0.334 Sum_probs=57.3
Q ss_pred ccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEecc
Q 007213 354 GVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLAT 432 (612)
Q Consensus 354 G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~~ 432 (612)
.++|..|.++|||++ ||++||+|++|||+++.+|.++ ...+... .|+.+.++|.|+|+.+++.+++..
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~----------~~~l~~~-~g~~v~l~v~R~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTF----------VMLVRDN-PGXSLALEIERQGSPLSLTLIPES 73 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHH----------HHHHHHC-TTCCEEEEEEETTEEEEEEECCEE
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHH----------HHHHhcC-CCCeEEEEEEECCeEEEEEEEEee
Confidence 366789999999999 9999999999999999999874 3555553 788999999999998888887653
No 152
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.80 E-value=7.5e-09 Score=88.97 Aligned_cols=75 Identities=15% Similarity=0.120 Sum_probs=59.2
Q ss_pred CCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhh
Q 007213 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 405 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~ 405 (612)
.++||+.+... .. ...|++|..|.++|||++ ||++||+|++|||++|.++. +. .++.
T Consensus 21 ~~~lG~~~~~~-~~----------~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~-~~----------~~~~ 78 (100)
T 2eeh_A 21 AGRLGFSVRGG-SE----------HGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTT-MG----------SAVK 78 (100)
T ss_dssp SSSCSEEEECC-TT----------TTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCC-HH----------HHHH
T ss_pred CCCccEEEEcc-cc----------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC-HH----------HHHH
Confidence 57899998764 11 135899999999999999 99999999999999999874 21 3333
Q ss_pred ccCCCCEEEEEEEECCEE
Q 007213 406 QKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 406 ~~~~g~~v~l~V~R~G~~ 423 (612)
....|+.+.|+|.|+|+.
T Consensus 79 ~~~~~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 79 VLTSSSRLHMMVRRMGSG 96 (100)
T ss_dssp HHHSCSSEEEEEEECSCC
T ss_pred hhcCCCEEEEEEEECCcC
Confidence 333478999999999863
No 153
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=4.4e-09 Score=90.77 Aligned_cols=82 Identities=20% Similarity=0.222 Sum_probs=56.3
Q ss_pred CCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCC--CCCCccccCccchHHH
Q 007213 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSY 402 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~ 402 (612)
+++||+.+... ....++.++++. ..|++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..
T Consensus 15 ~~~lG~~~~~~-~~~~~~~~~~~~-~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~~ 82 (103)
T 2fcf_A 15 SKSLGISIVGG-RGMGSRLSNGEV-MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQ----------AVE 82 (103)
T ss_dssp -CCCCEEEECC-CC--------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHH
T ss_pred CCceeEEEEcc-CCCCcccccCCC-CCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHH
Confidence 57899999876 555555555543 56999999999999999 9 99999999999999988 444 335
Q ss_pred HhhccCCCCEEEEEEEECCE
Q 007213 403 LVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 403 ~l~~~~~g~~v~l~V~R~G~ 422 (612)
++... ++.+.|+|.|.++
T Consensus 83 ~l~~~--~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 83 AIRKA--GNPVVFMVQSIIS 100 (103)
T ss_dssp HHHTC--CSSEEEEEECCCC
T ss_pred HHHhC--CCcEEEEEEECCC
Confidence 55543 4589999998654
No 154
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.79 E-value=3.4e-09 Score=86.90 Aligned_cols=77 Identities=10% Similarity=0.212 Sum_probs=59.9
Q ss_pred CeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhc
Q 007213 331 GVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQ 406 (612)
Q Consensus 331 Gi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~ 406 (612)
|+.+..+ +++..+.+|+.. ..|++|..|.++|||++ | |++||+|++|||+++. ++.++ ..++..
T Consensus 1 G~~~~~~-~~~~~~~~g~~~-~~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~----------~~~l~~ 68 (81)
T 2rcz_A 1 GSKVTLV-KSRKNEEYGLRL-ASHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDA----------KTLIER 68 (81)
T ss_dssp CEEEEEE-CCSTTCCCCEEE-EEEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHH----------HHHHHT
T ss_pred CeEEEEE-ECCCCCCCCEEE-eCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHC
Confidence 5666776 777777888864 26899999999999999 9 9999999999999999 66553 355544
Q ss_pred cCCCCEEEEEEEECC
Q 007213 407 KYTGDSAAVKVLRDS 421 (612)
Q Consensus 407 ~~~g~~v~l~V~R~G 421 (612)
.++.+.++|.|+|
T Consensus 69 --~~~~v~l~v~R~g 81 (81)
T 2rcz_A 69 --SKGKLKMVVQRDE 81 (81)
T ss_dssp --STTEEEEEEEC--
T ss_pred --CCCeEEEEEEeCC
Confidence 2358999999875
No 155
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.77 E-value=4.7e-09 Score=88.54 Aligned_cols=62 Identities=21% Similarity=0.243 Sum_probs=52.1
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~ 424 (612)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .|+++.|+|.|+|+.+
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLE--------AQNRIKG--CTDNLTLTVARSEHES 89 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHH--------HHHHHHT--CSSEEEEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECCccc
Confidence 4899999999999999 99999999999999999988211 2345544 7899999999998754
No 156
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.76 E-value=1.1e-08 Score=89.49 Aligned_cols=83 Identities=19% Similarity=0.300 Sum_probs=60.5
Q ss_pred CCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhh
Q 007213 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 405 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~ 405 (612)
+..||+.+..-... ..+.....|++|..|.++|||++ ||++||+|++|||++|.++.+.. ....
T Consensus 25 ~~glG~~i~~g~~~-----~~~~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~ 89 (110)
T 1x5q_A 25 TGGLGISIAGGKGS-----TPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHE----------AVEA 89 (110)
T ss_dssp SSSCSEEEEECTTS-----CCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHH
T ss_pred CCeeeEEEEccccC-----CccccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH----------HHHH
Confidence 45688877643110 01111356999999999999999 99999999999999999976532 2222
Q ss_pred ccCCCCEEEEEEEECCEEE
Q 007213 406 QKYTGDSAAVKVLRDSKIL 424 (612)
Q Consensus 406 ~~~~g~~v~l~V~R~G~~~ 424 (612)
....|+.+.|+|.|+|+.+
T Consensus 90 ~~~~g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 90 LRGAGTAVQMRVWRESGPS 108 (110)
T ss_dssp HHSCCSEEEEEEEECSSCC
T ss_pred hhCCCCeEEEEEEECCccC
Confidence 2337899999999998653
No 157
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.74 E-value=2.1e-08 Score=86.55 Aligned_cols=83 Identities=19% Similarity=0.230 Sum_probs=60.3
Q ss_pred CCcCCeEEeeecChhhHH-hhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCC--CCccccCccchHHH
Q 007213 327 FPLLGVEWQKMENPDLRV-AMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG--TVPFRHGERIGFSY 402 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~-~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~--~v~~~~~~~~~~~~ 402 (612)
+++||+.+..-.+.+.+. .++......|++|..|.++|||++ ||++||+|++|||+++.+.. ++ ..
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~ 87 (104)
T 3sfj_A 18 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQA----------RK 87 (104)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHH----------HH
T ss_pred CCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HH
Confidence 467999988321222221 222223367999999999999999 99999999999999998765 42 24
Q ss_pred HhhccCCCCEEEEEEEEC
Q 007213 403 LVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 403 ~l~~~~~g~~v~l~V~R~ 420 (612)
.+.. ..|+.+.|+|.|+
T Consensus 88 ~l~~-~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 88 RLTK-RSEEVVRLLVTRQ 104 (104)
T ss_dssp HHTC-TTCSEEEEEEEEC
T ss_pred HHHh-CCCCEEEEEEEcC
Confidence 4433 5788999999884
No 158
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=98.71 E-value=4.6e-08 Score=88.89 Aligned_cols=61 Identities=8% Similarity=-0.128 Sum_probs=56.0
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhC-CCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENC-DDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~-~~~~~~l~~~r~~~~ 582 (612)
..+++|..|.++++|. +|+++||+|++|||++|.++.+|.+++... +++.++|++.|+++.
T Consensus 56 ~~g~~V~~V~~~spA~-aGL~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 117 (134)
T 2l97_A 56 TSGVIVRSVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKE 117 (134)
T ss_dssp CSCEEEEECSTTSGGG-TTSCSSCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEETTEE
T ss_pred CCCEEEEEECCCCchH-HCCCCCCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 4679999999999999 999999999999999999999999999986 578999999998764
No 159
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=98.71 E-value=7.5e-09 Score=114.32 Aligned_cols=157 Identities=17% Similarity=0.153 Sum_probs=89.4
Q ss_pred CCcccccCC--cceEEEEEEEeCCEEEecccccCCC---CeEEEEEcCC----CcEEEEEEEEecc--------------
Q 007213 138 SLPWQRKRQ--YSSSSSGFAIGGRRVLTNAHSVEHY---TQVKLKKRGS----DTKYLATVLAIGT-------------- 194 (612)
Q Consensus 138 ~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvV~~~---~~i~V~~~~~----g~~~~a~vv~~d~-------------- 194 (612)
.+||+.... ....|+|.+|++.||||+|||+.+. ..+.|.+... +..+..+-+..++
T Consensus 234 ~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~ 313 (509)
T 2odp_A 234 RTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILE 313 (509)
T ss_dssp HCTTEEEEEC----CEEEEECSSSEEEECGGGC--------CEEEECCTTCTTCEEECEEEEEECTTCCTTTTGGGTCCC
T ss_pred CCCcEEEEEeCCCcEEEEEEEcCCEEEEcHHHcCCCCCcceEEEEeCCcccCCCceeeeEEEEECCCCcccccccccccc
Confidence 478886432 3457999999999999999999753 4567777421 2344444444332
Q ss_pred --CCCeEEEEeccc-cccCCeeeeEcCCCC--------CCCCeEEEEEeCCCCCc-----------eeEEEEEEe---ce
Q 007213 195 --ECDIAMLTVEDD-EFWEGVLPVEFGELP--------ALQDAVTVVGYPIGGDT-----------ISVTSGVVS---RI 249 (612)
Q Consensus 195 --~~DLAlLkv~~~-~~~~~l~pl~l~~~~--------~~G~~V~aiG~p~g~~~-----------~sv~~GiIs---~~ 249 (612)
.+|||||+++.+ .+...+.|++|.... ..|..+++.|+...... ..+..-++. ..
T Consensus 314 ~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 393 (509)
T 2odp_A 314 FYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWT 393 (509)
T ss_dssp CCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHHH
T ss_pred ccCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCceeeEEEecCccHH
Confidence 369999999865 345678999997531 23555544443211110 012222322 22
Q ss_pred eeeccc------C-------CceeeeEEEEc----cCCCCCCCCCeEecCC-C--eEEEEEeccc
Q 007213 250 EILSYV------H-------GSTELLGLQID----AAINSGNSGGPAFNDK-G--KCVGIAFQSL 294 (612)
Q Consensus 250 ~~~~~~------~-------~~~~~~~i~~d----a~i~~G~SGGPlvn~~-G--~VIGI~~~~~ 294 (612)
.|.... . ......+|+.. ...|.|+|||||+... | .++||++.+.
T Consensus 394 ~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~ 458 (509)
T 2odp_A 394 SCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGL 458 (509)
T ss_dssp HHHHGGGGCTTTCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEES
T ss_pred HHHHHhhcccccccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcC
Confidence 232210 0 01112356663 3578999999999653 3 4999999864
No 160
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.70 E-value=3.2e-08 Score=83.86 Aligned_cols=59 Identities=22% Similarity=0.311 Sum_probs=50.2
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ ||++||+|++|||++|.++.+. +++.....|+++.|+|.|++.
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-----------~~~~~~~~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-----------EVVKLIKSGAYVALTLLGSSS 88 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHH-----------HHHHHHTSSSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH-----------HHHHhhcCCCEEEEEEEECCC
Confidence 5899999999999999 9999999999999999987652 344444579999999999764
No 161
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=4.2e-09 Score=94.36 Aligned_cols=80 Identities=20% Similarity=0.312 Sum_probs=63.6
Q ss_pred CCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHh
Q 007213 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLV 404 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l 404 (612)
..+||+.+... ... ....|++|..|.++|||++ | |++||+|++|||++|.++.++ ..++
T Consensus 31 ~~~lG~~~~~~-~~~--------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~----------~~~l 91 (124)
T 1wh1_A 31 QDKLGLTVCYR-TDD--------EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEA----------VALL 91 (124)
T ss_dssp TCCCCEEEECC-CCC--------SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHH----------HHHH
T ss_pred CCcccEEEEec-CCC--------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHH----------HHHH
Confidence 34689998876 222 0136999999999999999 9 999999999999999988764 3666
Q ss_pred hccCCCCEEEEEEEECCEEEEE
Q 007213 405 SQKYTGDSAAVKVLRDSKILNF 426 (612)
Q Consensus 405 ~~~~~g~~v~l~V~R~G~~~~~ 426 (612)
.. ..|+.+.|+|.|+|+.++.
T Consensus 92 ~~-~~g~~v~l~v~R~g~~~~~ 112 (124)
T 1wh1_A 92 TS-EENKNFSLLIARPELQLDE 112 (124)
T ss_dssp TC-SSCCSCCEEEEECSSCCCC
T ss_pred Hh-CCCCEEEEEEEECCEEeec
Confidence 55 4688999999999875443
No 162
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.70 E-value=1e-07 Score=85.82 Aligned_cols=101 Identities=20% Similarity=0.153 Sum_probs=69.2
Q ss_pred CCCCCCcccccC---CcceEEEEEEEeCCEEEecccccCCCCeEEEEEcC--------CCcEEEEEEEEecc-------C
Q 007213 134 EPNFSLPWQRKR---QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKKRG--------SDTKYLATVLAIGT-------E 195 (612)
Q Consensus 134 ~~~~~~p~~~~~---~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~--------~g~~~~a~vv~~d~-------~ 195 (612)
.....+||+... .....|+|.+|++.||||+|||+.+ ..+.|.+.. .++.+..+-+..++ .
T Consensus 7 a~~~~~Pw~v~l~~~~~~~~CgGsLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~ 85 (131)
T 1yph_C 7 AVPGSWPWQVSLQDKTGFHFCGGSLINENWVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTIN 85 (131)
T ss_dssp CCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCC
T ss_pred CCCCCcCcEEEEEeCCCCEEEEEEEeeCCEEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCCCC
Confidence 344567777543 2346899999999999999999976 445555531 12334444444443 4
Q ss_pred CCeEEEEeccc-cccCCeeeeEcCCCC---CCCCeEEEEEeCCC
Q 007213 196 CDIAMLTVEDD-EFWEGVLPVEFGELP---ALQDAVTVVGYPIG 235 (612)
Q Consensus 196 ~DLAlLkv~~~-~~~~~l~pl~l~~~~---~~G~~V~aiG~p~g 235 (612)
+|||||+++.+ .+.+.+.|+.|.... ..|+.+++.||...
T Consensus 86 ~DIALl~L~~~~~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t 129 (131)
T 1yph_C 86 NDITLLKLSTAASFSQTVSAVCLPSASDDFAAGTTCVTTGWGLT 129 (131)
T ss_dssp SCCEEEEESSCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCS
T ss_pred CCEEEEEECCcccCCCcCcceECCCcccCCCCCCEEEEEcCCcc
Confidence 69999999875 345578999998633 35889999998753
No 163
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.70 E-value=1.7e-08 Score=90.39 Aligned_cols=82 Identities=20% Similarity=0.222 Sum_probs=58.8
Q ss_pred CCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCC--CCCCccccCccchHHH
Q 007213 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSY 402 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~ 402 (612)
+++||+.+... .......++++. ..|++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..
T Consensus 35 ~~~lGi~v~~~-~~~~~~~~~~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~----------~~~ 102 (123)
T 2iwq_A 35 SKSLGISIVGG-RGMGSRLSNGEV-MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQ----------AVE 102 (123)
T ss_dssp TSCCSEEEEEC-C---------CC-CCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHH
T ss_pred CCCccEEEEec-cCccccccccCC-CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHH
Confidence 57899999876 444444445443 56999999999999999 9 99999999999999988 444 335
Q ss_pred HhhccCCCCEEEEEEEECCE
Q 007213 403 LVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 403 ~l~~~~~g~~v~l~V~R~G~ 422 (612)
++... ++.+.|+|.|.+.
T Consensus 103 ~l~~~--~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 103 AIRKA--GNPVVFMVQSIIS 120 (123)
T ss_dssp HHHHC--CSSEEEEEECCCC
T ss_pred HHHcC--CCeEEEEEEECCc
Confidence 55443 5589999998653
No 164
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.68 E-value=5.8e-08 Score=109.27 Aligned_cols=78 Identities=15% Similarity=0.337 Sum_probs=66.5
Q ss_pred hhhcc--cCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 345 AMSMK--ADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 345 ~lgl~--~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
.+|+. .+..|++|..|.++|||++ ||++||+|++|||++| ++.+ +...+....+|++++|+|.|+|
T Consensus 486 ~lG~~~~~~~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~----------l~~~l~~~~~g~~v~l~v~R~g 554 (597)
T 4fgm_A 486 NFGAKYKASPQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQS----------VKRILERYIPGDTVTIHAFRRD 554 (597)
T ss_dssp CCSEEEEEETTEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTT----------HHHHHTTCCTTCEEEEEEEETT
T ss_pred ccceEEeccCCeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHH----------HHHHHHhcCCCCEEEEEEEECC
Confidence 56653 2345899999999999999 9999999999999999 5777 4477777678999999999999
Q ss_pred EEEEEEEEeccC
Q 007213 422 KILNFNITLATH 433 (612)
Q Consensus 422 ~~~~~~v~l~~~ 433 (612)
+.+++++++...
T Consensus 555 ~~~~~~v~l~~~ 566 (597)
T 4fgm_A 555 ELMTLELTWQEP 566 (597)
T ss_dssp EEEEEEEECCCC
T ss_pred EEEEEEEEecCC
Confidence 999999998754
No 165
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.68 E-value=1.8e-08 Score=90.63 Aligned_cols=59 Identities=15% Similarity=0.113 Sum_probs=49.8
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCCHH--HHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLK--SLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~--~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
.+++|.+|.++++|..+|+++||+|++|||++|.++. ++.+.++. ++.+.|++.|+++.
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~v~l~v~R~g~~ 106 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILHDEAVRLLKS--SRHLILTVKDVGRL 106 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHTT--CSEEEEEEECCSCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCeEEEEEEECCcc
Confidence 3689999999999999999999999999999999964 45555553 46899999998764
No 166
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.67 E-value=6e-09 Score=88.79 Aligned_cols=75 Identities=13% Similarity=0.221 Sum_probs=57.3
Q ss_pred cCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhh
Q 007213 329 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVS 405 (612)
Q Consensus 329 ~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~ 405 (612)
.+|+.+.... |++. ..|++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++.
T Consensus 15 ~~G~~l~~~~--------~~~~-~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~ 75 (96)
T 2v90_A 15 GFGFLLREEK--------GLDG-RPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEE----------TVSRIQ 75 (96)
T ss_dssp BSCEEEEEEE--------CTTS-CEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHH----------HHHHHH
T ss_pred cccEEEEecc--------CCCC-CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHH
Confidence 4677766531 2222 45899999999999999 9999999999999999984 33 334554
Q ss_pred ccCCCCEEEEEEEECCEEE
Q 007213 406 QKYTGDSAAVKVLRDSKIL 424 (612)
Q Consensus 406 ~~~~g~~v~l~V~R~G~~~ 424 (612)
. .|+.+.|+|.|+|+..
T Consensus 76 ~--~g~~v~l~v~r~~~~~ 92 (96)
T 2v90_A 76 G--QGSCVSLTVVDPEADR 92 (96)
T ss_dssp T--TTTEEEEEEECCCTTS
T ss_pred c--CCCEEEEEEECCCCcc
Confidence 4 3899999999988643
No 167
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.67 E-value=3.8e-08 Score=96.25 Aligned_cols=84 Identities=20% Similarity=0.224 Sum_probs=67.6
Q ss_pred CCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCC-CCEEEEECCEEeCCCCCCccccCccchHHHHh
Q 007213 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKP-SDIILSFDGIDIANDGTVPFRHGERIGFSYLV 404 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~-GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l 404 (612)
++++|+.+..+ +++.+. ..|++|..|.++|||++ ||++ ||+|++|||+ |.++.++ ...+
T Consensus 94 ~~~lGi~~~~~-~~~~~~-------~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l----------~~~l 154 (209)
T 3rle_A 94 QGLLGVSIRFC-SFDGAN-------ENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDL----------FSLI 154 (209)
T ss_dssp SSSSCEEEEEE-ECTTGG-------GSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCH----------HHHH
T ss_pred cCccceEEeec-ChhHcc-------ccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHH----------HHHH
Confidence 57899999887 554432 25999999999999999 9999 9999999998 9999984 4667
Q ss_pred hccCCCCEEEEEEEECCE--EEEEEEEe
Q 007213 405 SQKYTGDSAAVKVLRDSK--ILNFNITL 430 (612)
Q Consensus 405 ~~~~~g~~v~l~V~R~G~--~~~~~v~l 430 (612)
... .|+++.|+|+|++. ..+++++.
T Consensus 155 ~~~-~g~~v~l~v~r~~~~~~~~v~l~p 181 (209)
T 3rle_A 155 ETH-EAKPLKLYVYNTDTDNCREVIITP 181 (209)
T ss_dssp HHT-TTSCEEEEEEETTTTEEEEEEECC
T ss_pred HhC-CCCeEEEEEEECCceEEEEEEEEe
Confidence 665 88999999999764 34555544
No 168
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.66 E-value=2.9e-08 Score=87.02 Aligned_cols=82 Identities=15% Similarity=0.147 Sum_probs=64.8
Q ss_pred CcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CC-CCCCEEEEECCEEeCC--CCCCccccCccchHHHH
Q 007213 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VL-KPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 403 (612)
Q Consensus 328 ~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL-~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~ 403 (612)
..+|+.+... . +..|++|..|.++|||++ || ++||+|++|||+++.+ +.+ +..+
T Consensus 13 ~glG~~~~~~-~-----------~~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~----------~~~~ 70 (112)
T 1qau_A 13 GGLGFLVKER-V-----------SKPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDS----------ALEV 70 (112)
T ss_dssp TBTSEEEEEC-S-----------SSSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHH----------HHHH
T ss_pred CceeEEEEec-C-----------CCCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 4577777643 1 135899999999999999 98 9999999999999998 555 3355
Q ss_pred hhccCCCCEEEEEEEECCEEEEEEEEecc
Q 007213 404 VSQKYTGDSAAVKVLRDSKILNFNITLAT 432 (612)
Q Consensus 404 l~~~~~g~~v~l~V~R~G~~~~~~v~l~~ 432 (612)
+.. ..|+.+.|+|.|+|+..++.+....
T Consensus 71 l~~-~~g~~v~l~v~R~g~~~~~~~~~~~ 98 (112)
T 1qau_A 71 LRG-IASETHVVLILRGPEGFTTHLETTF 98 (112)
T ss_dssp HHH-SCSSSEEEEEEECCTTSEEEEEEEE
T ss_pred HHh-CCCCcEEEEEEeCCcccceEeeeec
Confidence 554 4688999999999988887777654
No 169
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.66 E-value=7.4e-09 Score=92.10 Aligned_cols=62 Identities=18% Similarity=0.327 Sum_probs=53.1
Q ss_pred CCccEEEEecC--CCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEE
Q 007213 352 QKGVRIRRVDP--TAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (612)
Q Consensus 352 ~~G~~V~~V~p--~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~ 425 (612)
..|++|..|.+ +|||++ ||++||+|++|||++|.+| .++ ..++... |+.+.|+|.|+|+..+
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl----------~~~l~~~--g~~v~l~v~R~g~~~~ 109 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEV----------EDAIKQT--SQTLQLLIEHDPVPQR 109 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHH----------HHHHHCC--SSCEEEEEEECSSCCC
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHH----------HHHHHhC--CCEEEEEEEECCEEEe
Confidence 46999999999 999999 9999999999999999999 664 3555554 8899999999987543
No 170
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.65 E-value=6.2e-08 Score=85.04 Aligned_cols=60 Identities=13% Similarity=0.059 Sum_probs=55.1
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|..+|+++||+|++|||+++.++++|.++++. ++.+.|++.|+++.
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~--~~~v~l~v~R~g~~ 93 (113)
T 2pzd_A 34 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT--QSQLAVQIRRGRET 93 (113)
T ss_dssp SSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHH--CSSEEEEEEETTEE
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHhC--CCeEEEEEEECCEE
Confidence 4679999999999999999999999999999999999999999986 57899999888754
No 171
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.65 E-value=1.9e-08 Score=86.51 Aligned_cols=73 Identities=16% Similarity=0.172 Sum_probs=58.0
Q ss_pred CcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhc
Q 007213 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQ 406 (612)
Q Consensus 328 ~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~ 406 (612)
..+|+.+... .. ...|++|..|.++|||++ ||++||+|++|||++|.++.+. ..+..
T Consensus 21 ~~lG~~~~~~-~~----------~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-----------~~~~~ 78 (101)
T 1uez_A 21 EGLGFSIRGG-SE----------HGVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHA-----------EAVKA 78 (101)
T ss_dssp TCSSEEEEEC-TT----------TTCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHH-----------HHHHH
T ss_pred CcccEEEeCC-CC----------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH-----------HHHHh
Confidence 4578877654 11 135899999999999999 9999999999999999998763 34444
Q ss_pred cCCCCEEEEEEEECCE
Q 007213 407 KYTGDSAAVKVLRDSK 422 (612)
Q Consensus 407 ~~~g~~v~l~V~R~G~ 422 (612)
...++.+.|+|.|+|+
T Consensus 79 ~~~~~~v~l~v~R~g~ 94 (101)
T 1uez_A 79 LKGSKKLVLSVYSAGR 94 (101)
T ss_dssp SSSSSSCCEEECCCCC
T ss_pred hcCCCeEEEEEEECCc
Confidence 4567789999999875
No 172
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.63 E-value=4.2e-08 Score=81.89 Aligned_cols=58 Identities=16% Similarity=0.242 Sum_probs=48.9
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ ||++||+|++|||+++.++ .+ +..++.... +.+.|+|.|+|+
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~~--~~v~l~v~R~~~ 86 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAE----------AQSKIRQSP--SPLRLQLDRITS 86 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHH----------HHHHHHTCC--SSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcCC--CeEEEEEEecCC
Confidence 4899999999999999 9999999999999999984 44 335555543 789999999874
No 173
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.62 E-value=3.1e-09 Score=93.72 Aligned_cols=68 Identities=21% Similarity=0.305 Sum_probs=53.4
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNIT 429 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~ 429 (612)
..|++|..|.++|||++ ||++||+|++|||++|.++..-. +..++.. .|+++.|+|.|+|+..++.+.
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~~~~~~~~~~ 105 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQ--------VVELVRK--SGNSVTLLVLDGDSYEKAVKN 105 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHH--------HHHHHHH--TCSEEEEEEECHHHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCEEEEEEEECCcceehhhc
Confidence 46999999999999999 99999999999999999862111 2344443 489999999998876554443
No 174
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.61 E-value=3.9e-08 Score=88.11 Aligned_cols=61 Identities=16% Similarity=0.279 Sum_probs=52.7
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||++|.++ .++ ...+.....|+.+.|+|.|+++
T Consensus 50 ~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~----------~~~l~~~~~g~~v~l~v~R~~~ 113 (124)
T 3tsv_A 50 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEA----------VLFLLDLPKGEEVTILAQKKKD 113 (124)
T ss_dssp TSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHH----------HHHHHHSCTTCEEEEEEEECHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhcCCCCEEEEEEEECCc
Confidence 35899999999999999 9999999999999999998 553 3556665689999999999875
No 175
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.61 E-value=1.8e-08 Score=90.58 Aligned_cols=70 Identities=21% Similarity=0.177 Sum_probs=58.9
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEec
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 431 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~ 431 (612)
.|++|..|.++|||++ ||++||+|++|||++|.++.+ . .++.....++.+.|+|.|+|+..++++++.
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~-~----------~~~~~~~~~~~v~l~v~R~g~~~~~~v~~~ 114 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILH-D----------EAVRLLKSSRHLILTVKDVGRLPHARTTVD 114 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCH-H----------HHHHHHTTCSEEEEEEECCSCCSSCSCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCH-H----------HHHHHHhcCCeEEEEEEECCcccccccccc
Confidence 4899999999999999 999999999999999999765 1 445545567899999999999887777766
Q ss_pred cC
Q 007213 432 TH 433 (612)
Q Consensus 432 ~~ 433 (612)
..
T Consensus 115 ~~ 116 (128)
T 1uf1_A 115 ET 116 (128)
T ss_dssp SS
T ss_pred cc
Confidence 53
No 176
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.60 E-value=9.5e-08 Score=79.86 Aligned_cols=60 Identities=18% Similarity=0.355 Sum_probs=47.2
Q ss_pred CCccEEEEecCCCcccCCCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..+ ++|||+.||++||+|++|||+++.++ .+ +..++.....|+++.|+|.|+|+
T Consensus 26 ~~~~~v~~v-~~spA~aGl~~GD~I~~vng~~v~~~~~~~----------~~~~l~~~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 26 GGGQRVKQI-VDSPRSRGLKEGDLIVEVNKKNVQALTHNQ----------VVDMLVESPKGSEVTLLVQRQTR 87 (88)
T ss_dssp SSSEEEEEC-CC--CCTTCCTTCEEEEETTEECTTSCHHH----------HHHHHHTSCTTCEEEEEEEEECC
T ss_pred CCcEEEEEe-cCChhHhCCCCCCEEEEECCEEcCCCCHHH----------HHHHHHhCCCCCEEEEEEEeCCc
Confidence 358888887 99999889999999999999999997 33 23455545578999999999874
No 177
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.59 E-value=1.9e-08 Score=84.75 Aligned_cols=60 Identities=17% Similarity=0.273 Sum_probs=46.4
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
..|++|..|.++|||++ ||++||+|++|||++|. ++.+ +..++... |+.+.|+|.|+|+.
T Consensus 26 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~--g~~v~l~v~r~~~~ 88 (91)
T 2vsp_A 26 LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEK----------VVDRIQSS--GKNVTLLVCGKKAQ 88 (91)
T ss_dssp CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHH----------HHHHHTTS--CSEEEEEEEC----
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcC--CCEEEEEEEeCCcc
Confidence 35899999999999999 99999999999999998 5555 33555543 89999999998764
No 178
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.59 E-value=1.1e-07 Score=81.82 Aligned_cols=62 Identities=8% Similarity=0.056 Sum_probs=56.1
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhC-CCCeEEEEEeCCeEEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENC-DDEFLKFDLEYDQVVV 583 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~-~~~~~~l~~~r~~~~~ 583 (612)
..+++|.+|.++++|.. |+++||+|++|||++|.++++|.+++... +++.+.|++.|+++..
T Consensus 6 ~~Gv~V~~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~ 68 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNE 68 (100)
T ss_dssp CCCEEEEEECTTSGGGG-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCCchHH-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEE
Confidence 67899999999999985 99999999999999999999999999975 5779999999987653
No 179
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.58 E-value=9.9e-08 Score=83.40 Aligned_cols=79 Identities=15% Similarity=0.263 Sum_probs=58.4
Q ss_pred CcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhh
Q 007213 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 405 (612)
Q Consensus 328 ~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~ 405 (612)
..+|+.+... ... .....|++|..|.++|||++ | |++||+|++|||++|.++..- .+..++.
T Consensus 22 ~glG~~~~~~-~~~-------~~~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~--------~~~~~l~ 85 (111)
T 2koj_A 22 EGLGFSITSR-DVT-------IGGSAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQE--------EVVSLLR 85 (111)
T ss_dssp TBTCEEEEEC-SCS-------SSSSSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHH--------HHHHHHH
T ss_pred CccCEEEEec-cCC-------CCCCcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHH
Confidence 3477877654 111 01135899999999999999 9 999999999999999876311 1335555
Q ss_pred ccCCCCEEEEEEEECCE
Q 007213 406 QKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 406 ~~~~g~~v~l~V~R~G~ 422 (612)
....|+.+.|+|.|+|+
T Consensus 86 ~~~~g~~v~l~v~R~~~ 102 (111)
T 2koj_A 86 STKMEGTVSLLVFRQEE 102 (111)
T ss_dssp HCCCSSEEEEEEEECCC
T ss_pred hCCCCCeEEEEEEeCCC
Confidence 55568999999999885
No 180
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.58 E-value=8.5e-08 Score=83.25 Aligned_cols=62 Identities=16% Similarity=0.231 Sum_probs=52.1
Q ss_pred CCccEEEEecCCCcccCCCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
..|++|..|.++|||+.||++||+|++|||++|.++.+.. ..+.....|+.+.|+|.|+|+.
T Consensus 38 ~~gv~V~~V~~~spA~agl~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAEGQLQENDRVAMVNGVSMDNVEHAF----------AVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CCCEEEEEECTTSTTBTTBCTTCEEEEETTEECTTCCHHH----------HHHHHHTCCSEEEEEEEEESCC
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEECCCccHHH----------HHHHhhCCCCEEEEEEEECCCC
Confidence 4599999999999998899999999999999999997742 3444446789999999998753
No 181
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.57 E-value=5.7e-08 Score=82.91 Aligned_cols=61 Identities=25% Similarity=0.340 Sum_probs=49.2
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .|+.+.|+|.|+|+
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQA--------VIDLIKE--ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--SCSEEEEEEEEC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc--CCCeEEEEEEeCCC
Confidence 35899999999999999 9 9999999999999999974321 2344444 78999999999874
No 182
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.57 E-value=2.3e-08 Score=84.90 Aligned_cols=60 Identities=18% Similarity=0.274 Sum_probs=49.8
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
..|++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++... ++.+.|+|.|+|+.
T Consensus 29 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~--~~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 29 HTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAE----------AQSKIRQS--ASPLRLQLDRSSGP 91 (94)
T ss_dssp TEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHHHHTC--CSSEEEEEECCCCC
T ss_pred CCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC--CCcEEEEEEECCcC
Confidence 34899999999999999 9999999999999999987 44 33555443 37899999999864
No 183
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.57 E-value=9.9e-08 Score=83.65 Aligned_cols=60 Identities=13% Similarity=0.035 Sum_probs=54.2
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
..+++|..|.+++++..+|+++||+|++|||++|.++.+|.++++ .++.+.|++.|+++.
T Consensus 34 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~--~g~~v~l~v~R~g~~ 93 (112)
T 2p3w_A 34 SSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQEAVL--TESPLLLEVRRGNDD 93 (112)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHH--HCSSEEEEEEETTEE
T ss_pred CCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHh--CCCeEEEEEEECCEE
Confidence 467999999999999999999999999999999999999999995 367899999888754
No 184
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.56 E-value=4.2e-08 Score=82.00 Aligned_cols=60 Identities=17% Similarity=0.253 Sum_probs=48.6
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.+++|..|.++|||++ ||++||+|++|||+++.++.... +..++.. .|+.+.|+|.|+|.
T Consensus 27 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLE--------AQNKIKG--CTGSLNMTLQRESD 87 (88)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHH--------HHHHHHT--CCSEEEEEEECCCC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEeCCC
Confidence 4799999999999999 99999999999999999984211 2234433 38899999999874
No 185
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.55 E-value=1.6e-08 Score=91.12 Aligned_cols=81 Identities=15% Similarity=0.196 Sum_probs=61.9
Q ss_pred CcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCC--CCCCccccCccchHHHH
Q 007213 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 403 (612)
Q Consensus 328 ~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~ 403 (612)
..||+.+... ....+..+|+.. ..|++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..+
T Consensus 42 ~~lG~~i~~~-~~~~~~~~g~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~----------~~~~ 109 (128)
T 1nf3_C 42 KPLGFYIRDG-SSVRVTPHGLEK-VPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQ----------VTDM 109 (128)
T ss_dssp SCCCEEEEEE-EEEEEETTEEEE-EEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHH----------HHHH
T ss_pred CCccEEEEcc-ccccccccccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 3478888766 555556667654 46899999999999999 9 99999999999999954 333 2344
Q ss_pred hhccCCCCEEEEEEEECCE
Q 007213 404 VSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 404 l~~~~~g~~v~l~V~R~G~ 422 (612)
+.. .++.+.|+|.|+|+
T Consensus 110 l~~--~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 110 MIA--NSRNLIITVRPANQ 126 (128)
T ss_dssp HHH--TTTSEEEEEECCCC
T ss_pred HHc--CCCeEEEEEEECCc
Confidence 442 46679999999875
No 186
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.55 E-value=3.4e-08 Score=83.63 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=54.0
Q ss_pred ceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhC-CCCeEEEEEeCCeEE
Q 007213 523 FPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENC-DDEFLKFDLEYDQVV 582 (612)
Q Consensus 523 ~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~-~~~~~~l~~~r~~~~ 582 (612)
+++|..|.++++|.. |+++||+|++|||++|.++.+|.++|+.. +++.++|++.|+++.
T Consensus 2 Gv~V~~V~~~spA~~-GL~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 61 (91)
T 2kjp_A 2 GIYASSVVENMPAKG-KIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEKE 61 (91)
T ss_dssp CSSCCCCCCSSCCSS-CCCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESSSCE
T ss_pred ceEEEEECCCChHHH-cCCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEECCEE
Confidence 577889999999998 99999999999999999999999999987 588999999998764
No 187
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.55 E-value=1.1e-07 Score=80.57 Aligned_cols=61 Identities=18% Similarity=0.276 Sum_probs=49.0
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||+++.+..... ....+. ..|+.+.|+|.|+|+
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~ 90 (95)
T 2vwr_A 28 EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPEL--------AAQIIQ--ASGERVNLTIARPGK 90 (95)
T ss_dssp SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--HCCSEEEEEEEEESC
T ss_pred CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCEEEEEEEcCCc
Confidence 35899999999999999 9 9999999999999998864421 112222 358999999999875
No 188
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.55 E-value=2.7e-08 Score=84.76 Aligned_cols=60 Identities=30% Similarity=0.434 Sum_probs=51.0
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
..|++|..|.++|||++ | |++||+|++|||+++.+ +.+ +..++.. .|+.+.|+|.|+++.
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~g~~v~l~v~R~~~~ 94 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAE----------AMSILKQ--CGQEAALLIEYDVSE 94 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH----------HHHHHHH--SCSEEEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCeEEEEEEeCCCc
Confidence 45899999999999999 9 99999999999999998 444 3355554 789999999998764
No 189
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.54 E-value=1.3e-07 Score=84.24 Aligned_cols=63 Identities=14% Similarity=0.306 Sum_probs=51.0
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||++|.++..- .+..++.....|+.+.|+|.|+|+
T Consensus 57 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~g~ 121 (121)
T 2kom_A 57 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQE--------EVVSLLRSTKMEGTVSLLVFRQED 121 (121)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHH--------HHHHHHHHCCSSCEEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHH--------HHHHHHhcCCCCCEEEEEEEeCCC
Confidence 35899999999999999 9 999999999999999986310 133555555568999999999874
No 190
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.54 E-value=6.3e-08 Score=81.33 Aligned_cols=59 Identities=24% Similarity=0.400 Sum_probs=49.6
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++... |+.+.|+|.|.+.
T Consensus 27 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~--~~~v~l~v~r~~~ 88 (90)
T 2he4_A 27 RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAE----------VVASIKAR--EDEARLLVVGPST 88 (90)
T ss_dssp SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHH----------HHHHHTTS--SSEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcC--CCcEEEEEEccCC
Confidence 35899999999999999 9999999999999999998 44 33555443 7899999999764
No 191
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.53 E-value=1.7e-07 Score=79.98 Aligned_cols=62 Identities=19% Similarity=0.213 Sum_probs=49.4
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~ 424 (612)
.|++|..|.++|||++ | |++||+|++|||+++.++.... +..++. ..++.+.|+|.|+++..
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~~~ 93 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDE--------AINVLR--QTPQRVRLTLYRDEAPY 93 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEEECSSCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCeEEEEEEcCCCCC
Confidence 5899999999999999 9 9999999999999999875211 123333 24588999999988643
No 192
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=98.53 E-value=1.4e-07 Score=99.38 Aligned_cols=63 Identities=13% Similarity=0.143 Sum_probs=58.0
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhC-CCCeEEEEEeCCeEEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENC-DDEFLKFDLEYDQVVV 583 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~-~~~~~~l~~~r~~~~~ 583 (612)
..+++|.+|.++++|..+|+++||+|++|||++|.++.+|.++|... +++.++|++.|+++..
T Consensus 262 ~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 325 (345)
T 3stj_A 262 QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPL 325 (345)
T ss_dssp CSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred CceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 46799999999999999999999999999999999999999999875 6789999999987654
No 193
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.53 E-value=8.9e-08 Score=82.93 Aligned_cols=70 Identities=11% Similarity=0.121 Sum_probs=49.1
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNIT 429 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~ 429 (612)
..|++|..|.++|||++ | |++||+|++|||+++.+..... ....+ ...|+.+.|+|.|+++...+.++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~~~~~~~~~ 101 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEE--------AVTAL--KNTSDFVYLKVAKPTSMYISRHH 101 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHH--------HHHHH--HSCCSEEEEEEECCCC-------
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEcCCCCCCcccc
Confidence 35899999999999999 9 9999999999999998754311 11222 23478999999999987777665
Q ss_pred ec
Q 007213 430 LA 431 (612)
Q Consensus 430 l~ 431 (612)
..
T Consensus 102 p~ 103 (105)
T 2awx_A 102 HH 103 (105)
T ss_dssp --
T ss_pred cc
Confidence 43
No 194
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.52 E-value=1.1e-07 Score=80.84 Aligned_cols=61 Identities=13% Similarity=0.178 Sum_probs=55.9
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhC-CCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENC-DDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~-~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|.. |+++||+|++|||++|.++.+|.++++.. +++.+.|++.|+++.
T Consensus 4 ~~Gv~V~~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 65 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRKQ 65 (94)
T ss_dssp CCCEECCCCCTTSTTBT-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTEE
T ss_pred CCcEEEEEECCCChHHh-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEE
Confidence 56799999999999998 99999999999999999999999999986 578999999998764
No 195
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.52 E-value=1e-07 Score=81.28 Aligned_cols=57 Identities=11% Similarity=0.027 Sum_probs=52.5
Q ss_pred eEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhCCC-CeEEEEEeCCe
Q 007213 524 PWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENCDD-EFLKFDLEYDQ 580 (612)
Q Consensus 524 v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~~~-~~~~l~~~r~~ 580 (612)
++|.+|.++++|..+|+++||+|++|||++|.+|++|.++|....+ +.+.|++.|++
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g 61 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFG 61 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTT
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECC
Confidence 5788999999999999999999999999999999999999987665 68999999886
No 196
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.52 E-value=9.7e-08 Score=79.88 Aligned_cols=61 Identities=8% Similarity=-0.044 Sum_probs=53.9
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhC-CCCeEEEEEeCCeEE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENC-DDEFLKFDLEYDQVV 582 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~-~~~~~~l~~~r~~~~ 582 (612)
.++.|..+.+++++..+|+++||+|++|||++|.+|.+|.++++.. +++.+.|++.|+++.
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~ 80 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQ 80 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTEE
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4677888888888899999999999999999999999999999875 467899999998765
No 197
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.52 E-value=1.3e-07 Score=84.98 Aligned_cols=67 Identities=27% Similarity=0.414 Sum_probs=56.4
Q ss_pred CCccEEEEecCCCcccCCCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEec
Q 007213 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITLA 431 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l~ 431 (612)
..|++|..|.++|||++.|++||+|++|||++|.+|.++ ...+.....|+.+.|+| |+|+ +++++.
T Consensus 24 ~~gv~V~~V~~~spA~~aL~~GD~Il~InG~~v~~~~dl----------~~~l~~~~~g~~v~l~V-R~g~---~~v~l~ 89 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKVLTPGLVIESINGMPTSNLTTY----------SAALKTISVGEVINITT-DQGT---FHLKTG 89 (125)
T ss_dssp CCCEEEEEECSSSGGGGTSCTTCEEEEETTEECSSHHHH----------HHHHTTCCTTCEEEEEE-TTEE---EEEECC
T ss_pred CCceEEEEECCCChHHHhcCCCCEEEEECCEEcCCHHHH----------HHHHHhcCCCCEEEEEE-ECCE---EEEEEe
Confidence 569999999999999777999999999999999999874 36666556789999999 9987 555555
Q ss_pred c
Q 007213 432 T 432 (612)
Q Consensus 432 ~ 432 (612)
.
T Consensus 90 ~ 90 (125)
T 2hga_A 90 R 90 (125)
T ss_dssp B
T ss_pred c
Confidence 3
No 198
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.51 E-value=3.6e-08 Score=85.21 Aligned_cols=58 Identities=21% Similarity=0.356 Sum_probs=49.5
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.+++|..|.++|||++ ||++||+|++|||++|.+ +.++ ..++... |+.+.|+|.|+|+
T Consensus 29 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~----------~~~l~~~--g~~v~l~v~R~g~ 89 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADA----------QDRIKAA--SYQLCLKIDRAET 89 (103)
T ss_dssp EEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHH----------HHHHTTC--CSEEECEECCCTT
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhC--CCeEEEEEEECCe
Confidence 3789999999999999 999999999999999998 5553 3555543 8999999999886
No 199
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.51 E-value=1.5e-07 Score=79.15 Aligned_cols=58 Identities=22% Similarity=0.394 Sum_probs=47.6
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
.|++|..|.++|||++ ||++||+|++|||+++.++.+.. ...++. ..|+.+.|+|.|+
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCL--------VVPLIA--ESGNKLDLVISRN 90 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TSTTEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCEEEEEEEeC
Confidence 5899999999999999 99999999999999999986522 112222 3588999999986
No 200
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.51 E-value=1.5e-07 Score=81.76 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=52.7
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE-EEEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK-ILNFNI 428 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~-~~~~~v 428 (612)
..|++|..|.++|||++ | |++||+|++|||++|.++.... ...++ ...++++.|+|.|+++ ...+++
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l--~~~~~~v~l~v~R~~~~~~~~~v 100 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEE--------AVTAL--KNTSDFVYLKVAKPGSGEKIMEI 100 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHH--HSCCSEEEEEEECCSSSCSEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--hCCCCeEEEEEEeCCCCCeEEEE
Confidence 45899999999999999 9 9999999999999998754321 12333 3357899999999874 334445
Q ss_pred Eec
Q 007213 429 TLA 431 (612)
Q Consensus 429 ~l~ 431 (612)
++.
T Consensus 101 ~l~ 103 (106)
T 4amh_A 101 KLI 103 (106)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
No 201
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.51 E-value=8.5e-08 Score=79.49 Aligned_cols=61 Identities=11% Similarity=0.296 Sum_probs=47.8
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||+++.++.... +..++. ..++++.|+|.|+|+
T Consensus 24 ~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~ 85 (85)
T 1rgw_A 24 NMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLE--------AQNKIK--SASYNLSLTLQKSKR 85 (85)
T ss_dssp TSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHH--------HHHHHT--TCSSCEEEEEESCCC
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH--------HHHHHH--cCCCeEEEEEEeCCC
Confidence 34899999999999999 99999999999999999984211 122222 246779999999863
No 202
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.51 E-value=1.8e-07 Score=79.66 Aligned_cols=61 Identities=11% Similarity=0.193 Sum_probs=49.7
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
.|++|..|.++|||++ | |++||+|++|||+++.++..-. +..++. ..|+.+.|+|.|+|+.
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSE--------AIHLLQ--MAGETVTLKIKKQTDA 92 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEECCCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCCC
Confidence 5899999999999999 9 9999999999999998763211 234444 4788999999998753
No 203
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.50 E-value=2.1e-08 Score=86.67 Aligned_cols=68 Identities=16% Similarity=0.168 Sum_probs=53.5
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEEe
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNITL 430 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~l 430 (612)
.+++|..|.++|||++ ||++||+|++|||+++.++.... +..++.. .++.+.|+|.|+|+..++++++
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~g~~~~~~v~p 97 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLE--------AQNKIKA--CTGSLNMTLQRASAAAKSEPVS 97 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHH--------HHHHHHH--CSSEEEEEECCCSCCCCCCCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCCcCCCCCCC
Confidence 3688999999999999 99999999999999999984321 2223332 4788999999999876665543
No 204
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.50 E-value=3.1e-08 Score=87.17 Aligned_cols=76 Identities=20% Similarity=0.274 Sum_probs=56.5
Q ss_pred cCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhcc
Q 007213 329 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQK 407 (612)
Q Consensus 329 ~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~ 407 (612)
-||+.+... . ....|++|..|.++|||++ ||++||+|++|||++|.+|.... +..++..
T Consensus 28 ~lG~~l~~~-~----------~~~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~--------~~~~~~~- 87 (114)
T 1x5n_A 28 GLGCSISSG-P----------IQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKE--------AVNVLKS- 87 (114)
T ss_dssp CCCEEEEEC-C----------SSSCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTH--------HHHHHHH-
T ss_pred ceeEEEeec-C----------CCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc-
Confidence 367777643 1 1245899999999999999 99999999999999999997532 1233332
Q ss_pred CCCCEEEEEEEEC-CEEEEE
Q 007213 408 YTGDSAAVKVLRD-SKILNF 426 (612)
Q Consensus 408 ~~g~~v~l~V~R~-G~~~~~ 426 (612)
++.+.|+|.|+ |+.+++
T Consensus 88 --~~~v~l~v~r~~g~~~~~ 105 (114)
T 1x5n_A 88 --SRSLTISIVAAAGRELFM 105 (114)
T ss_dssp --CSSEEEEECSSTTTHHHH
T ss_pred --CCeEEEEEEcCCCCceEE
Confidence 35799999998 765433
No 205
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.48 E-value=3e-08 Score=84.70 Aligned_cols=60 Identities=23% Similarity=0.417 Sum_probs=50.1
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||++|.+ +.+ +..++... .++.+.++|.|+|+
T Consensus 32 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~-~~~~~~l~v~R~g~ 94 (98)
T 2jxo_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGD----------VVSAIRAG-GDETKLLVVDRETD 94 (98)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHHHHTT-TTEEEEEECCHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC-CCcEEEEEEECCch
Confidence 35899999999999999 999999999999999998 555 33556555 67778899988764
No 206
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.48 E-value=8.9e-08 Score=78.33 Aligned_cols=58 Identities=17% Similarity=0.196 Sum_probs=51.5
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
.+++|.+|.+++++..+| ++.||+|++|||+++. +++++.+++++.. +.+.|++.|++
T Consensus 21 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~g 81 (81)
T 2rcz_A 21 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQRDE 81 (81)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTST-TEEEEEEEC--
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCCC-CeEEEEEEeCC
Confidence 568999999999999999 9999999999999999 9999999999765 48889988864
No 207
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.48 E-value=1.3e-07 Score=78.75 Aligned_cols=59 Identities=12% Similarity=0.068 Sum_probs=54.9
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|.+|.++++|..+|+++||+|++|||+++.+ ++++.++++..+ +.+.|++.|+++
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~ 86 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSP-SPLRLQLDRITS 86 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCC-SSEEEEEEECCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEecCC
Confidence 46999999999999999999999999999999999 899999999877 899999998864
No 208
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.48 E-value=2e-07 Score=78.55 Aligned_cols=62 Identities=18% Similarity=0.213 Sum_probs=47.8
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~ 424 (612)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .++.+.|+|.|++...
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVE--------LAHEIRS--CPSEIILLVWRMVPQV 86 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHHT--CSSEEEEEEEECC---
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCCCC
Confidence 4799999999999999 99999999999999999864211 2233433 4678999999987643
No 209
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.48 E-value=1.3e-07 Score=79.12 Aligned_cols=61 Identities=16% Similarity=0.251 Sum_probs=48.4
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||+++.++.... +..++.. .|+.+.|+|.|+|+
T Consensus 26 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 26 NVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIE--------AQNKIRA--CGERLSLGLSRAIT 87 (89)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHH--------HHHHHHT--CTTEEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCEEEEEEEeCCC
Confidence 34899999999999999 99999999999999999863211 2233332 47889999999875
No 210
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.47 E-value=4.8e-08 Score=87.65 Aligned_cols=68 Identities=15% Similarity=0.187 Sum_probs=57.3
Q ss_pred CccEEEEecCCCcccC-CC-CCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEE
Q 007213 353 KGVRIRRVDPTAPESE-VL-KPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNI 428 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL-~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v 428 (612)
.|++|..|.++|||++ || ++||+|++|||++|.+ +.+ +..++.. ..|+.+.|+|.|+|+..++++
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~----------~~~~l~~-~~g~~v~l~v~R~g~~~~~~~ 101 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDS----------ALEVLRG-IASETHVVLILRGPEGFTTHL 101 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHH----------HHHHHHS-CCSSCEEEEEECCCCSEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHh-CCCCeEEEEEEeCCceEEEEE
Confidence 4899999999999999 98 9999999999999998 555 3355554 478899999999998887777
Q ss_pred Eec
Q 007213 429 TLA 431 (612)
Q Consensus 429 ~l~ 431 (612)
.+.
T Consensus 102 ~~~ 104 (127)
T 1b8q_A 102 ETT 104 (127)
T ss_dssp CCC
T ss_pred EEE
Confidence 654
No 211
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.47 E-value=9.7e-08 Score=80.94 Aligned_cols=61 Identities=16% Similarity=0.168 Sum_probs=48.9
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..+++|..|.++|||++ ||++||+|++|||++|.++.... +..++. ..|+.+.|+|.|+|+
T Consensus 31 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLE--------AQNRIK--GCHDHLTLSVSSGPS 92 (94)
T ss_dssp TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHH--------HHHHHH--TCCSCEEEEEECCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCC
Confidence 35799999999999999 99999999999999999974321 122332 267889999999875
No 212
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.46 E-value=2.9e-07 Score=78.37 Aligned_cols=59 Identities=19% Similarity=0.131 Sum_probs=46.7
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
..|++|..|.++|||++ | |++||+|++|||++|.+..... ........++++.|+|.|.
T Consensus 30 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~----------~~~~~~~~~~~v~l~v~R~ 90 (96)
T 2qkv_A 30 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV----------SYALFKGANGKVSMEVTRP 90 (96)
T ss_dssp SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHH----------HHHHHHTCSSEEEEEEECC
T ss_pred CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHhcCCCcEEEEEEeC
Confidence 35899999999999999 9 9999999999999998854321 1222234567899999985
No 213
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.45 E-value=6.5e-08 Score=82.77 Aligned_cols=59 Identities=15% Similarity=0.218 Sum_probs=47.8
Q ss_pred ccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 354 GVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 354 G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
|++|..|.++|||++ ||++||+|++|||+++.++.... +..++. ..|+.+.|+|.|+|+
T Consensus 35 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMD--------VVELLL--KSGNKISLRTTALEN 94 (99)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH--------HHHHHH--HSCSEEEEEEECSCS
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHh--cCCCEEEEEEEECCC
Confidence 778999999999999 99999999999999999433211 224444 478999999999775
No 214
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.45 E-value=1.4e-07 Score=79.25 Aligned_cols=59 Identities=12% Similarity=0.187 Sum_probs=54.1
Q ss_pred eEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 524 PWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 524 v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
++|.+|.+++++..+|++.||+|++|||+++.++.+|.+++...+++.+.|++.|+++.
T Consensus 6 ~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~g~~ 64 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVRDNPGXSLALEIERQGSP 64 (91)
T ss_dssp CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHHHCTTCCEEEEEEETTEE
T ss_pred eEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHhcCCCCeEEEEEEECCeE
Confidence 56788999999999999999999999999999999999999987788999999988754
No 215
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.45 E-value=1.1e-07 Score=79.80 Aligned_cols=61 Identities=11% Similarity=0.094 Sum_probs=54.8
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeec--CCHHHHHHHHHhC-CCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPV--KNLKSLANMVENC-DDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v--~~~~~l~~~l~~~-~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+|+++||+|++|||++| .++.+|.++++.. +++.+.|++.|+++
T Consensus 27 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 27 IPGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGK 90 (90)
T ss_dssp TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC-
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 4679999999999999999999999999999999 8999999999874 57889999988763
No 216
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.45 E-value=1.4e-07 Score=81.52 Aligned_cols=71 Identities=18% Similarity=0.252 Sum_probs=54.8
Q ss_pred CcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCC--CCCCccccCccchHHHHh
Q 007213 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLV 404 (612)
Q Consensus 328 ~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l 404 (612)
..+|+.+..- .+ ...|++|..|.++|||++ ||++||+|++|||++|.+ +.++ ..++
T Consensus 27 ~~lG~~~~~~----------~~-~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~----------~~~l 85 (104)
T 1wi2_A 27 AQLGFNIRGG----------KA-SQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKA----------VEIL 85 (104)
T ss_dssp CCCSEEEECC----------SS-SCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHH----------HHHH
T ss_pred CCccEEEEcc----------cC-CCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHH
Confidence 5688887643 11 135899999999999999 999999999999999998 4442 2444
Q ss_pred hccCCCCEEEEEEEECCE
Q 007213 405 SQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 405 ~~~~~g~~v~l~V~R~G~ 422 (612)
.. ++.+.|+|.|+..
T Consensus 86 ~~---~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 86 KT---AREISMRVRFFSG 100 (104)
T ss_dssp HH---SSSEEEEEECCCC
T ss_pred hC---CCEEEEEEEECCC
Confidence 43 7889999998653
No 217
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.45 E-value=1.5e-07 Score=79.15 Aligned_cols=60 Identities=7% Similarity=-0.017 Sum_probs=52.5
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+|+++||+|++|||++|. +++++.++|+.. ++.+.|++.|++.
T Consensus 26 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 87 (91)
T 2vsp_A 26 LPGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSS-GKNVTLLVCGKKA 87 (91)
T ss_dssp CSCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-CSEEEEEEEC---
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEeCCc
Confidence 35789999999999999999999999999999999 999999999987 8899999988764
No 218
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.45 E-value=2.3e-07 Score=78.44 Aligned_cols=61 Identities=13% Similarity=0.162 Sum_probs=48.1
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||+++.++.... +..++. ..++.+.|+|.|+|+
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEE--------AVASLK--NTSDMVYLKVAKPGS 94 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHH--------HHHHHH--TCCSEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEcCCC
Confidence 45899999999999999 9 9999999999999999874311 122332 245689999999873
No 219
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.44 E-value=2.7e-07 Score=78.49 Aligned_cols=56 Identities=20% Similarity=0.329 Sum_probs=46.7
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
.|++|..|.++|||++ ||++||+|++|||+++.++ .+ +..++... ++.+.|+|.|+
T Consensus 37 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~--~~~v~l~v~~~ 95 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHRE----------IVDIIKAS--GNVLRLETLYG 95 (96)
T ss_dssp EEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHH----------HHHHHHHT--TTEEEEEEECC
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC--CCeEEEEEEEC
Confidence 4899999999999999 9999999999999999986 44 33555554 56899998875
No 220
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.43 E-value=2.5e-07 Score=76.69 Aligned_cols=60 Identities=13% Similarity=0.209 Sum_probs=48.3
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R 419 (612)
..|++|..|.++|||++ | |++||+|++|||+++.++..-. +..++.....|+++.++|.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQ--------VVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhCCCCCeEEEEEEC
Confidence 35799999999999999 9 9999999999999999763211 33566665568889998876
No 221
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.42 E-value=4.7e-07 Score=78.41 Aligned_cols=61 Identities=18% Similarity=0.240 Sum_probs=49.1
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||+++.+..... +..++. ..|+.+.|+|.|+|+
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~ 99 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQER--------AAELMT--RTSSVVTLEVAKQGA 99 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEECCCS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCc
Confidence 45899999999999999 9 9999999999999998754321 112232 368999999999875
No 222
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.42 E-value=2.5e-07 Score=79.21 Aligned_cols=56 Identities=16% Similarity=0.241 Sum_probs=46.7
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
.|++|..|.++|||++ | |++||+|++|||++|.+ |.++ ..++... +++++|+|.+.
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~----------~~~l~~~--~~~v~L~V~~~ 95 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQL----------QKAMKET--KGMISLKVIPN 95 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHH----------HHHHHHC--CEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHcC--CCeEEEEEEEC
Confidence 5899999999999999 9 99999999999999996 6663 3566543 56788888764
No 223
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.42 E-value=2.1e-07 Score=78.78 Aligned_cols=59 Identities=24% Similarity=0.437 Sum_probs=47.4
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
.|++|..|.++|||++ ||++||+|++|||+++.++ .++ ..++.. .++.+.+.+.|.+..
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGV----------VEMIRK--GGDQTTLLVLDKELE 90 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHH----------HHHHHT--TTTEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHh--CCCeEEEEEECCccc
Confidence 4899999999999999 9999999999999999998 442 345544 567788888876543
No 224
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.42 E-value=1.3e-07 Score=81.88 Aligned_cols=61 Identities=23% Similarity=0.368 Sum_probs=50.2
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||+++.++.... +..++. ..|+.+.|+|.|+++
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~r~~~ 86 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQ--------VVELVR--KSGNSVTLLVLDGDS 86 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHH--------HHHHHH--HTTTEEEEEEECHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCEEEEEEEECCe
Confidence 45899999999999999 99999999999999999987211 234444 368899999999765
No 225
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.41 E-value=3.4e-07 Score=79.59 Aligned_cols=60 Identities=18% Similarity=0.137 Sum_probs=47.0
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
..|++|..|.++|||++ | |++||+|++|||++|.+..... ........++++.|+|.|..
T Consensus 24 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~----------~~~~~~~~~~~v~l~v~R~~ 85 (106)
T 2la8_A 24 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV----------CYALFKGANGKVSMEVTRPK 85 (106)
T ss_dssp SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHH----------HHHHHHSCBSCEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHHHhCCCCeEEEEEEeCC
Confidence 35899999999999999 9 9999999999999998754421 12222345677999999853
No 226
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.41 E-value=2e-07 Score=78.64 Aligned_cols=68 Identities=21% Similarity=0.252 Sum_probs=54.5
Q ss_pred CCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEe-CCCCCCccccCccchHHHH
Q 007213 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDI-ANDGTVPFRHGERIGFSYL 403 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V-~s~~~v~~~~~~~~~~~~~ 403 (612)
..+||+.+... ..|++|..|.++|||++ | |++||+|++|||++| .++.++ ..+
T Consensus 17 ~~~lG~~i~~~--------------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~----------~~~ 72 (91)
T 2e7k_A 17 GEHLGVTFRVE--------------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRAL----------QEL 72 (91)
T ss_dssp TCCCCEEEEES--------------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHH----------HHH
T ss_pred CCcEeEEEEec--------------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHH----------HHH
Confidence 35788887652 35899999999999999 7 999999999999999 666663 355
Q ss_pred hhccCCCCEEEEEEEEC
Q 007213 404 VSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 404 l~~~~~g~~v~l~V~R~ 420 (612)
+.. .++++.|+|.|.
T Consensus 73 l~~--~~~~v~l~v~~~ 87 (91)
T 2e7k_A 73 LRN--ASGSVILKILSG 87 (91)
T ss_dssp HHT--CCSSBCEEEECC
T ss_pred HHc--CCCeEEEEEEEC
Confidence 554 467889999874
No 227
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.41 E-value=1.5e-07 Score=84.57 Aligned_cols=58 Identities=17% Similarity=0.266 Sum_probs=50.4
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
.+++|..|.++|||++ | |++||+|++|||++|. +|.+ +..++.....|+.++|+|.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d----------~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLRE----------FLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHH----------HHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH----------HHHHHhcCCCCCEEEEEEEEC
Confidence 4788999999999999 9 9999999999999995 6666 346777667899999999997
No 228
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.41 E-value=1.3e-07 Score=82.19 Aligned_cols=62 Identities=15% Similarity=0.351 Sum_probs=50.2
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
..|++|..|.++|||++ | |++||+|++|||++|.++..-. +..++.. .|+.+.|+|.|+|+.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSD--------VVEVLRN--AGNPVRLLLIRRLPL 106 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHH--------HHHHHHH--HCSEEEEEEEECCCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCcC
Confidence 45999999999999999 9 9999999999999999863211 2234433 688999999998864
No 229
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.40 E-value=1.8e-07 Score=78.73 Aligned_cols=59 Identities=10% Similarity=0.081 Sum_probs=54.8
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCCHH--HHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLK--SLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~--~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|.+|.++++|..+|+++||+|++|||++|.++. ++.++++. +++.+.|++.|+++
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~g~ 87 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKG-CTDNLTLTVARSEH 87 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEEEECC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECCc
Confidence 5689999999999999999999999999999999999 99999998 78899999998764
No 230
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.40 E-value=4.5e-08 Score=85.51 Aligned_cols=68 Identities=21% Similarity=0.253 Sum_probs=52.6
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFNIT 429 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~v~ 429 (612)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++ ...++.+.|+|.|+++..++.++
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~R~~~~~~~~v~ 104 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLR--------AVDLI--RHGGKKMRFLVAKSDVETAKKIH 104 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHH--------HHHHH--HTCCSEEEEEEECCCHHHHHHHS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEeCCcceeEEEE
Confidence 45899999999999999 9 9999999999999998754321 12222 23588999999999876554443
No 231
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.40 E-value=3.6e-07 Score=78.40 Aligned_cols=61 Identities=21% Similarity=0.286 Sum_probs=49.0
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||+++.++.... +..++.. .|+.+.|+|.|+++
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQD--------AVDLFRN--AGYAVSLRVQHRLE 98 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHHHT--CCSEEEEEEEEESC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEeCCC
Confidence 45899999999999999 9 9999999999999999874321 2233332 47889999999775
No 232
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.39 E-value=2.8e-05 Score=76.29 Aligned_cols=153 Identities=18% Similarity=0.242 Sum_probs=94.3
Q ss_pred EEEEe-CCEEEecccccCCC-CeEEEEEcCCCcEEEEE----EEEeccCCCeEEEEeccccccCCeeeeEcC---CCCCC
Q 007213 153 GFAIG-GRRVLTNAHSVEHY-TQVKLKKRGSDTKYLAT----VLAIGTECDIAMLTVEDDEFWEGVLPVEFG---ELPAL 223 (612)
Q Consensus 153 GfiI~-~g~ILT~aHvV~~~-~~i~V~~~~~g~~~~a~----vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~---~~~~~ 223 (612)
-+-|. ..||+||+|.+... ..++|+.. .|...-.. -+..-...||.|||++.+ ++|.+-. ..|..
T Consensus 32 l~gigyG~~iItn~HLf~rnng~L~I~s~-hG~f~v~nt~~lki~~i~g~DiiiIrmPkD-----fpPf~~kl~FR~P~~ 105 (241)
T 3mmg_A 32 LFGIGFGPYIIANQHLFRRNNGELTIKTM-HGEFAVANSTQLQMKPVEGRDIIVIKMAKD-----FPPFPQKLKFRQPTI 105 (241)
T ss_dssp EEEEEETTEEEECGGGGSSTTCEEEEEET-TEEEEEEEGGGSCEEECTBSSCEEEECCTT-----SCCCCSCCCBCCCCT
T ss_pred EEEEeECCEEEEChhhcccCCCeEEEEEC-CceEEccCCCceeeEEeCCccEEEEeCCCC-----CCCcchhcccCCCCC
Confidence 33344 78999999999854 56888873 33322111 244557899999999764 3443332 36778
Q ss_pred CCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecC-CCeEEEEEecccCCCcccee
Q 007213 224 QDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFND-KGKCVGIAFQSLKHEDVENI 302 (612)
Q Consensus 224 G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~-~G~VIGI~~~~~~~~~~~~~ 302 (612)
+++|..+|..+.....+. .||.........+. .+...-.....|+-|+||++. ||.+|||++..... ...++
T Consensus 106 ~E~V~lVg~~fq~k~~~s---~vSesS~i~p~~~~---~fWkHwIsT~~G~CGlPlVs~~Dg~IVGiHsl~~~~-~~~N~ 178 (241)
T 3mmg_A 106 KDRVCMVSTNFQQKSVSS---LVSESSHIVHKEDT---SFWQHWITTKDGQAGSPLVSIIDGNILGIHSLTHTT-NGSNY 178 (241)
T ss_dssp TCCEEEEEEEECSSCEEE---EEEEEECCEECTTS---SEEEECBCCCTTCTTCEEEETTTCCEEEEEEEEETT-TCCEE
T ss_pred CCeEEEEEeecccCCccE---EECCcceeEEcCCC---CEEEEEcCCCCCcCCCeEEEcCCCcEEEEEecccCC-CCcEE
Confidence 999999997665433222 23322211111111 345666778899999999998 89999999985421 22333
Q ss_pred ecccChhhHHHHHHHH
Q 007213 303 GYVIPTPVIMHFIQDY 318 (612)
Q Consensus 303 ~~aIPi~~i~~~l~~l 318 (612)
-.++|-+.+..+|+..
T Consensus 179 F~~f~~~f~~~~L~~~ 194 (241)
T 3mmg_A 179 FVEFPEKFVATYLDAA 194 (241)
T ss_dssp EEECCTTHHHHHTTCS
T ss_pred EEcCCHHHHHHHhhCc
Confidence 3345555555565543
No 233
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.39 E-value=4.3e-07 Score=80.33 Aligned_cols=60 Identities=22% Similarity=0.335 Sum_probs=49.5
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ | |++||+|++|||++|.+|.+.. ........|+.+.|+|.|++.
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~----------~~~~~~~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ----------AAIALKNAGQTVTIIAQYKPE 99 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHH----------HHHHHHTSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcCCCeEEEEEEECCc
Confidence 5899999999999999 9 9999999999999999987532 222233468899999999763
No 234
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.38 E-value=4e-07 Score=78.39 Aligned_cols=60 Identities=22% Similarity=0.333 Sum_probs=48.4
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ | |++||+|++|||+++.++.... +...+ ...++.+.|+|.|+++
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQ--------AAIAL--KNAGQTVTIIAQYKPE 96 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHH--------HHHHH--HTSCSEEEEEEEECHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEECcc
Confidence 4899999999999999 9 9999999999999998876532 11222 3367899999999753
No 235
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.38 E-value=1.9e-07 Score=79.64 Aligned_cols=60 Identities=8% Similarity=0.015 Sum_probs=54.8
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|..|.++++|..+|+++||+|++|||++|.+ ++++.++|+..+++.+.+++.|+++
T Consensus 33 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g~ 94 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETD 94 (98)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEECCHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEECCch
Confidence 47999999999999999999999999999999999 9999999998876677788888764
No 236
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.38 E-value=3.2e-07 Score=76.57 Aligned_cols=60 Identities=12% Similarity=0.103 Sum_probs=54.1
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+|+++||+|++|||++|.++ .++.++++.. ++.+.|++.|++.
T Consensus 26 ~~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 26 NMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGC-TGSLNMTLQRESD 87 (88)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEECCCC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeCCC
Confidence 3468999999999999999999999999999999999 8999998865 7899999998864
No 237
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.38 E-value=3.6e-07 Score=77.40 Aligned_cols=78 Identities=13% Similarity=0.242 Sum_probs=56.3
Q ss_pred CcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhh
Q 007213 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVS 405 (612)
Q Consensus 328 ~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~ 405 (612)
..||+.+....... . ....|++|..|.++|||++ | |++||+|++|||+++.++.... +..++.
T Consensus 15 ~~lG~~i~~~~~~~------~-~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~ 79 (97)
T 2iwn_A 15 QGLGITIAGYIGDK------K-LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQ--------AVEVLR 79 (97)
T ss_dssp TBSCEEEECCCCC-----------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHH--------HHHHHH
T ss_pred CCCcEEEEccCCCC------C-CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH
Confidence 45788776531110 0 1246899999999999999 9 9999999999999999875321 123333
Q ss_pred ccCCCCEEEEEEEECCE
Q 007213 406 QKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 406 ~~~~g~~v~l~V~R~G~ 422 (612)
..|+++.|+|.|+|+
T Consensus 80 --~~~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 80 --HTGQTVLLTLMRRGE 94 (97)
T ss_dssp --TCCSEEEEEEEEEEE
T ss_pred --cCCCeEEEEEEeCCC
Confidence 278899999999875
No 238
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.38 E-value=3.9e-07 Score=79.95 Aligned_cols=62 Identities=16% Similarity=0.182 Sum_probs=49.4
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++. ..|+.+.|+|.|+|+.
T Consensus 48 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 48 NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSR--------AIELIK--NGGRRVRLFLKRGETS 111 (112)
T ss_dssp TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TTTTEEEEEEECCEEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCcc
Confidence 35899999999999999 9 9999999999999999874311 122332 2688999999998764
No 239
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.38 E-value=7.8e-07 Score=85.43 Aligned_cols=72 Identities=21% Similarity=0.387 Sum_probs=58.3
Q ss_pred CCccEEEEecCCCcccCCCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEE---CCEEEEEEE
Q 007213 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR---DSKILNFNI 428 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R---~G~~~~~~v 428 (612)
..|++|..|.++|||++||++||+|++|||++|.+..... ....+ ...++.+.|+|+| +|+..++.+
T Consensus 23 ~~g~~V~~v~~~spA~~gl~~GD~I~~vng~~v~~~~~~~--------~~~~~--~~~~~~v~l~v~r~~~~G~~~~~~v 92 (195)
T 2qbw_A 23 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLL--KTFQNTVELIIVREVGNGAKQEIRV 92 (195)
T ss_dssp CCSEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCCHHH--------HHHHH--HHCCSEEEEEEEEECSSSCEEEEEE
T ss_pred CCCEEEEEECCCChHHhCCCCCCEEEEECCEECCCCCHHH--------HHHHH--HcCCCeEEEEEEEcCCCCCCceeEe
Confidence 5699999999999999999999999999999999875421 11222 2346799999999 999999988
Q ss_pred EeccC
Q 007213 429 TLATH 433 (612)
Q Consensus 429 ~l~~~ 433 (612)
.+...
T Consensus 93 ~~~~~ 97 (195)
T 2qbw_A 93 RVEKD 97 (195)
T ss_dssp EEECC
T ss_pred Eeecc
Confidence 88743
No 240
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.37 E-value=4.8e-07 Score=76.81 Aligned_cols=60 Identities=7% Similarity=0.010 Sum_probs=55.0
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+|+++||+|++|||++|.+ ++++.++++.. ++.+.|++.|++.
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 90 (96)
T 2v90_A 29 RPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQGQ-GSCVSLTVVDPEA 90 (96)
T ss_dssp CEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEEECCCT
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEECCCC
Confidence 347999999999999999999999999999999999 89999999985 7899999998763
No 241
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.37 E-value=2.6e-07 Score=82.47 Aligned_cols=62 Identities=15% Similarity=0.268 Sum_probs=50.9
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
..|++|..|.++|||++ | |++||+|++|||++|.++..- .+..++.....|+.+.|+|.|++
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~~ 106 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHA--------DVVKLFQSVPIGQSVNLVLCRGY 106 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHH--------HHHHHHHTSCTTCEEEEEEEESC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCeEEEEEEeCC
Confidence 45899999999999999 9 999999999999999864321 13456666556899999999986
No 242
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.37 E-value=1.8e-07 Score=80.43 Aligned_cols=62 Identities=16% Similarity=0.208 Sum_probs=49.8
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
..|++|..|.++|||++ | |++||+|++|||+++.+..... +..++.. .|+.+.|+|.|+++.
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~ 96 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSR--------AVEALKE--AGPVVRLVVRRRQPP 96 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHH--------HHHHHHH--SCSEEEEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCCC
Confidence 46999999999999999 9 9999999999999998854311 2233333 688999999998764
No 243
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=2.5e-07 Score=79.77 Aligned_cols=61 Identities=13% Similarity=0.168 Sum_probs=49.2
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..+++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .|+.+.|+|.|+|+
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~g~ 99 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQ--------AVERIRA--GGPQLHLVIRRPLS 99 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHH--------HHHHHHH--TCSEEEEEECCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECCC
Confidence 35899999999999999 9 9999999999999999874211 2233333 58899999999875
No 244
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.37 E-value=4.6e-07 Score=76.87 Aligned_cols=61 Identities=13% Similarity=0.271 Sum_probs=48.8
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||+++.++.... +..++.. .|+.+.|+|.|++.
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQ--------AVETLRN--TGQVVHLLLEKGQS 94 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHH--------HHHHHHS--CCSEEEEEEECCSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEcCCC
Confidence 45899999999999999 9 9999999999999999763211 2233433 68899999999764
No 245
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.37 E-value=4.5e-08 Score=86.49 Aligned_cols=61 Identities=16% Similarity=0.279 Sum_probs=49.9
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeC---CCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA---NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~---s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~ 424 (612)
..|++|..|.++|||++ | |++||+|++|||++|. ++.++ ..++.. .|+.+.|+|.|+|+..
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~----------~~~l~~--~~~~v~l~v~R~~~~~ 113 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQA----------ISILQK--AKDTVQLVIARGSLPQ 113 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHH----------HHHHHH--CCSEEEEEEESSCCGG
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHH----------HHHHHc--CCCEEEEEEEeCCcce
Confidence 35899999999999999 9 9999999999999998 44442 244443 6889999999988643
No 246
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=98.36 E-value=4.1e-07 Score=94.55 Aligned_cols=62 Identities=10% Similarity=0.003 Sum_probs=57.3
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHh-CCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVEN-CDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~-~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|..+|+++||+|++|||++|.++.+|.++|+. .+++.++|++.|+++.
T Consensus 243 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 305 (318)
T 1te0_A 243 LQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQ 305 (318)
T ss_dssp CCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEESSSCE
T ss_pred CCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4679999999999999999999999999999999999999999987 5778999999998754
No 247
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.36 E-value=4.5e-07 Score=77.94 Aligned_cols=74 Identities=14% Similarity=0.129 Sum_probs=56.0
Q ss_pred CcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC--CCCCCCEEEEECCEEe--CCCCCCccccCccchHHHH
Q 007213 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYL 403 (612)
Q Consensus 328 ~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V--~s~~~v~~~~~~~~~~~~~ 403 (612)
.+||+.+..- . .+ ....+++|..|.++|||++ ||++||+|++|||++| .++.++ ..+
T Consensus 21 ~~lG~~i~~~-~------~~--~~~~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~----------~~~ 81 (101)
T 2yt7_A 21 EGLGVALVES-G------WG--SLLPTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAAC----------QAA 81 (101)
T ss_dssp CCCCEEEEEC-C------CS--SSSCCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHH----------HHH
T ss_pred CccCEEEEeC-C------CC--CCccCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHH
Confidence 4688887632 0 00 1133799999999999998 5999999999999999 666663 466
Q ss_pred hhccCCCCEEEEEEEEC
Q 007213 404 VSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 404 l~~~~~g~~v~l~V~R~ 420 (612)
+.....|+.++|+|.|.
T Consensus 82 l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 82 VRETKSQTSVTLSIVHC 98 (101)
T ss_dssp HHHTTTSSEEEEEECCC
T ss_pred HHhCCCCCeEEEEEEeC
Confidence 66655789999999873
No 248
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.36 E-value=2.2e-07 Score=83.49 Aligned_cols=78 Identities=15% Similarity=0.313 Sum_probs=59.0
Q ss_pred CcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCC--CCCCccccCccchHHHH
Q 007213 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYL 403 (612)
Q Consensus 328 ~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~ 403 (612)
..||+.+........ ++ ...|++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..+
T Consensus 27 ~~lG~~i~~~~~~~~---~~---~~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~----------~~~~ 90 (129)
T 2dmz_A 27 QSLGIRIVGYVGTSH---TG---EASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHD----------VVEV 90 (129)
T ss_dssp CCCCEEEEEECCCSS---SC---CCCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHH----------HHHH
T ss_pred CCcCEEEEeecCCcc---cC---CCCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHH
Confidence 457888765421111 11 246899999999999999 9 99999999999999998 444 3355
Q ss_pred hhccCCCCEEEEEEEECCEE
Q 007213 404 VSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 404 l~~~~~g~~v~l~V~R~G~~ 423 (612)
+.. .|+.+.|+|.|+|+.
T Consensus 91 l~~--~~~~v~l~v~R~~~~ 108 (129)
T 2dmz_A 91 LRN--AGQVVHLTLVRRKTS 108 (129)
T ss_dssp HHH--CCSSEEEEEEEESSS
T ss_pred HHc--CCCeEEEEEEeCCcc
Confidence 554 788999999998864
No 249
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=2.7e-07 Score=77.81 Aligned_cols=68 Identities=16% Similarity=0.259 Sum_probs=51.0
Q ss_pred ChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhccCCCCEEEE
Q 007213 339 NPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAV 415 (612)
Q Consensus 339 ~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l 415 (612)
.++....+|+.. ..| +|..|.++|||++ ||++||+|++|||++|. ++.+ +..++.. .|+.+.|
T Consensus 19 ~~~~~~~lG~~~-~~G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~----------~~~~l~~--~g~~v~l 84 (90)
T 1y7n_A 19 RPDLRYQLGFSV-QNG-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEK----------IVHILSN--AVGEIHM 84 (90)
T ss_dssp ESSTTSCCCEEE-ETT-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHH----------HHHHHHH--CCEEEEE
T ss_pred eCCCccccCeEe-cCC-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCeEEE
Confidence 344455566643 236 8999999999999 99999999999999995 4555 3355553 4788999
Q ss_pred EEEEC
Q 007213 416 KVLRD 420 (612)
Q Consensus 416 ~V~R~ 420 (612)
+|.+.
T Consensus 85 ~v~p~ 89 (90)
T 1y7n_A 85 KTMPA 89 (90)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 88764
No 250
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.36 E-value=2e-07 Score=83.13 Aligned_cols=60 Identities=13% Similarity=0.197 Sum_probs=51.7
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.+++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..++.....|+.+.|+|.|+++
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEE----------ANQLLRDSSITSKVTLEIEFDVA 108 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHH----------HHHHHHHHTTTTCEEEEEEEECC
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhCCCCCeEEEEEEECCc
Confidence 4689999999999999 9 99999999999999987 665 34667666568899999999875
No 251
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.36 E-value=1.1e-07 Score=82.11 Aligned_cols=63 Identities=19% Similarity=0.192 Sum_probs=49.4
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..+++|..|.++|||++ | |++||+|++|||++|.++..- .+..++.....|+.+.|+|.|+++
T Consensus 33 ~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 33 GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHR--------YVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHH--------HHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCcEEEEEEeCCC
Confidence 45899999999999999 9 999999999999999774211 123455444347899999999764
No 252
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.36 E-value=5.9e-07 Score=75.46 Aligned_cols=60 Identities=17% Similarity=0.179 Sum_probs=51.9
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
.+++|.+|.++++|..+| ++.||+|++|||+++. +++++.+++++.. +.+.|++.|+++.
T Consensus 23 ~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~g~~ 85 (92)
T 3cyy_A 23 SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERSK-GKLKMVVQRDERA 85 (92)
T ss_dssp EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHTTT-TEEEEEEEC----
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CcEEEEEEeCCce
Confidence 568999999999999999 9999999999999999 9999999999754 5889999998754
No 253
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.35 E-value=5.9e-07 Score=76.11 Aligned_cols=60 Identities=23% Similarity=0.423 Sum_probs=48.0
Q ss_pred CCccEEEEecCCCcccCCCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
..|++|..|.++|||++||++||+|++|||++|.++.... +...+. ..++.+.|+|.|+.
T Consensus 34 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 34 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLLK--TFQNTVELIIVREV 93 (95)
T ss_dssp CCCEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCBHHH--------HHHHHH--HCCSEEEEEEEEEC
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEEcCCCCHHH--------HHHHhh--cCCCeEEEEEEeCC
Confidence 4699999999999998899999999999999998865421 112222 36889999999864
No 254
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.35 E-value=5e-07 Score=75.76 Aligned_cols=60 Identities=8% Similarity=0.031 Sum_probs=54.6
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+|+++||+|++|||++|.++ +++.++++.. ++.+.|++.|.+.
T Consensus 27 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~~~ 88 (90)
T 2he4_A 27 RPGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR-EDEARLLVVGPST 88 (90)
T ss_dssp SSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTS-SSEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEccCC
Confidence 3579999999999999999999999999999999999 9999999976 7899999988653
No 255
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.35 E-value=2.5e-07 Score=78.41 Aligned_cols=60 Identities=13% Similarity=0.119 Sum_probs=55.0
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+|+++||+|++|||++|.++ +++.++++..+ +.+.|++.|+++
T Consensus 29 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~g~ 90 (94)
T 1vb7_A 29 HTPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSA-SPLRLQLDRSSG 90 (94)
T ss_dssp TEEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SSEEEEEECCCC
T ss_pred CCCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEECCc
Confidence 3578999999999999999999999999999999998 99999999876 889999999874
No 256
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.35 E-value=4e-07 Score=78.96 Aligned_cols=60 Identities=8% Similarity=-0.038 Sum_probs=51.6
Q ss_pred ceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHh-CCCCeEEEEEeCCeEE
Q 007213 523 FPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVEN-CDDEFLKFDLEYDQVV 582 (612)
Q Consensus 523 ~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~-~~~~~~~l~~~r~~~~ 582 (612)
++.|..+.+++++..+|+++||+|++|||++|.+|.+|.++++. .+++.+.|++.|+++.
T Consensus 38 G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~ 98 (105)
T 2i4s_A 38 GYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQ 98 (105)
T ss_dssp EEEEEECSCTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETTEE
T ss_pred EEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECCEE
Confidence 55566666677779999999999999999999999999999987 4577999999998765
No 257
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.35 E-value=3.1e-07 Score=80.70 Aligned_cols=60 Identities=20% Similarity=0.251 Sum_probs=48.6
Q ss_pred CCccEEEEecCCCcccC-CC-CCCCEEEEECCEEeCCCC--CCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 352 QKGVRIRRVDPTAPESE-VL-KPSDIILSFDGIDIANDG--TVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL-~~GDiIlaInG~~V~s~~--~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
..|++|..|.++|||++ || ++||+|++|||++|.++. + +..++.. .++++.|+|.|+++.
T Consensus 47 ~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~----------~~~~l~~--~~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 47 MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNE----------VFDLLSD--MHGTLTFVLIPSSGP 110 (113)
T ss_dssp SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHH----------HHHHHHH--CCEEEEEEEECCCCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCeEEEEEEECCcc
Confidence 35899999999999999 99 999999999999999653 4 2344443 346899999998864
No 258
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.35 E-value=2.6e-07 Score=82.53 Aligned_cols=61 Identities=8% Similarity=0.071 Sum_probs=56.5
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCCHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKNLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+| +++||+|++|||++|.++++|.++|+..+++.+.|++.|+++
T Consensus 47 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~~~g~~v~l~v~R~g~ 108 (124)
T 1wh1_A 47 DIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTSEENKNFSLLIARPEL 108 (124)
T ss_dssp CCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTCSSCCSCCEEEEECSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHhCCCCEEEEEEEECCE
Confidence 3679999999999999999 999999999999999999999999998778899999988874
No 259
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.34 E-value=4.3e-07 Score=77.34 Aligned_cols=60 Identities=12% Similarity=0.172 Sum_probs=53.8
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| +++||+|++|||++|.++ .++.++++. .++.+.|++.|+++
T Consensus 36 ~~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 36 TTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE-ADFKIELEIQTFDK 98 (98)
T ss_dssp EEEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH-SCSEEEEEEEEC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCeEEEEEEeCCC
Confidence 4579999999999999999 999999999999999997 899999987 77899999999863
No 260
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.34 E-value=7.4e-07 Score=75.94 Aligned_cols=58 Identities=16% Similarity=0.235 Sum_probs=47.1
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++ |++ ||++||+|++|||++|.++ .+ +..++.....|+.+.|+|.|+|+
T Consensus 32 ~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~----------~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 32 TGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTE----------VVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp TEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHH----------HHHHHHHSCTTSEEEEEEECCSS
T ss_pred CCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHcCCCCCEEEEEEEECCC
Confidence 48999999883 566 9999999999999999886 33 33566665568999999999875
No 261
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.33 E-value=5.4e-07 Score=82.32 Aligned_cols=63 Identities=6% Similarity=0.007 Sum_probs=56.0
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeEEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQVVV 583 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~~~ 583 (612)
..+++|.+|.++++|..+|+++||+|++|||++|. +++++.++|+..+++.+.|++.|+++..
T Consensus 63 ~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~ 127 (139)
T 2vz5_A 63 DKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQSLQK 127 (139)
T ss_dssp CCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCCTTCSEEEEEEEECC---
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCEEEEEEEECCEEE
Confidence 46899999999999999999999999999999999 6999999999877789999999987654
No 262
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.32 E-value=3.6e-06 Score=77.64 Aligned_cols=125 Identities=15% Similarity=0.138 Sum_probs=76.6
Q ss_pred cCCCeEEEEeccc-cccCCeeeeEcCCC-CCCCCeEEEEEeCCCCC----------ceeEEEEEEeceeeecccCCceee
Q 007213 194 TECDIAMLTVEDD-EFWEGVLPVEFGEL-PALQDAVTVVGYPIGGD----------TISVTSGVVSRIEILSYVHGSTEL 261 (612)
Q Consensus 194 ~~~DLAlLkv~~~-~~~~~l~pl~l~~~-~~~G~~V~aiG~p~g~~----------~~sv~~GiIs~~~~~~~~~~~~~~ 261 (612)
..+||||||++.+ .+...+.|+.|... ...|+.+++.||..... ...+..-+++...|..........
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~ 85 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQEPELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVTE 85 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSSCCCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCCT
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCCCCCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCCC
Confidence 3689999999865 34557899999863 35689999999864321 112334455544443321111112
Q ss_pred eEEEEc-----cCCCCCCCCCeEecCCCeEEEEEecc-cCCCccceeecccChhhHHHHHHHHH
Q 007213 262 LGLQID-----AAINSGNSGGPAFNDKGKCVGIAFQS-LKHEDVENIGYVIPTPVIMHFIQDYE 319 (612)
Q Consensus 262 ~~i~~d-----a~i~~G~SGGPlvn~~G~VIGI~~~~-~~~~~~~~~~~aIPi~~i~~~l~~l~ 319 (612)
.+|++. ...|.|+|||||+.. |+++||++.+ .........+...-+...+.++++..
T Consensus 86 ~~iCa~~~~~~~~~C~GDsGgPL~~~-g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~ 148 (152)
T 2pka_B 86 SMLCAGYLPGGKDTCMGDSGGPLICN-GMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTI 148 (152)
T ss_dssp TEEEEECTTSSCBCCTTCTTCEEEET-TEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CEEeeccCCCCCcccCCccccceEEC-CEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 345553 367899999999974 8999999985 22211122344455556666665543
No 263
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.32 E-value=4.5e-07 Score=77.10 Aligned_cols=60 Identities=10% Similarity=-0.018 Sum_probs=55.6
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| +++||+|++|||+++.+ ++++.++++. .++.+.|++.|++.
T Consensus 31 ~~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~~ 93 (97)
T 2jil_A 31 SRPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ-CGQEAALLIEYDVS 93 (97)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 4579999999999999999 99999999999999999 9999999998 78899999988764
No 264
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.32 E-value=6.4e-07 Score=75.35 Aligned_cols=61 Identities=21% Similarity=0.217 Sum_probs=48.1
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||+++.+..... +..++. ..++.+.|+|.|.+.
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEA--------VAALLK--CSLGTVTLEVGRIST 90 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--HCCSEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEcccc
Confidence 45999999999999999 9 9999999999999998754211 122332 257889999999763
No 265
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.32 E-value=3.9e-07 Score=78.36 Aligned_cols=61 Identities=25% Similarity=0.468 Sum_probs=48.7
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||++|.++..- .+..++.. .|+.+.|+|.|++.
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~--------~~~~~l~~--~g~~v~l~v~r~~~ 90 (102)
T 2d90_A 29 QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHD--------GVVEMIRK--GGDQTTLLVLDKEA 90 (102)
T ss_dssp SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHH--------HHHHHHHH--STTEEEEEECSTTC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHHc--CCCEEEEEEEECCC
Confidence 45899999999999999 9999999999999999986310 02234433 48899999998664
No 266
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.32 E-value=3.2e-07 Score=75.72 Aligned_cols=58 Identities=14% Similarity=0.173 Sum_probs=46.0
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
.|++|..|.++|||++ ||++||+|++|||+++.+|..-. +..++.. .++.+.|+|.|+
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~ 81 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHED--------VVKLIGK--CSGVLHMVIAEG 81 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHH--------HHHHHTT--CSSCEEEEEECC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEcC
Confidence 4789999999999999 99999999999999999983110 2234432 457799999986
No 267
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.32 E-value=1.9e-07 Score=78.28 Aligned_cols=61 Identities=16% Similarity=0.233 Sum_probs=47.0
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
.+++|..|.++|||++ | |++||+|++|||+++.+..... +..++.....++.+.|+|.|.+
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~--------~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQL--------VVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHH--------HHHHHHHHHHHTEEEEEEEECC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhCCCCCeEEEEEEecc
Confidence 4799999999999999 9 9999999999999996533211 2344544434568999999864
No 268
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.31 E-value=3.8e-07 Score=78.23 Aligned_cols=57 Identities=16% Similarity=0.095 Sum_probs=46.8
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhcc-CCCCEEEEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQK-YTGDSAAVKVL 418 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~-~~g~~v~l~V~ 418 (612)
..+.+|..|.++|||++ ||++||+|++|||++|. +|+++ ...+... ..|+.+.|.|.
T Consensus 38 ~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv----------~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 38 NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEV----------ESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHH----------HHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHH----------HHHHHHhhccCCeEEEEEe
Confidence 45788999999999999 99999999999999984 88874 3566553 46788888764
No 269
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.31 E-value=6.3e-07 Score=75.09 Aligned_cols=59 Identities=12% Similarity=0.151 Sum_probs=53.9
Q ss_pred CceEEEeeeccccccc-ccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIG-YEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~-~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|.+|.++++|.. +|+++||+|++|||+++. +++++.++|+..++ .++|++.|.+.
T Consensus 25 ~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 25 NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREMRG-SITFKIVPSYR 86 (88)
T ss_dssp GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHCCE-EEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCC-cEEEEEECCcC
Confidence 4689999999999999 889999999999999999 99999999999876 88999888754
No 270
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.31 E-value=8.2e-07 Score=77.51 Aligned_cols=60 Identities=23% Similarity=0.376 Sum_probs=48.4
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ | |++||+|++|||++|.++..-. +..++.. .|+.+.|+|.|++.
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~~~ 99 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQ--------VAQVLRN--CGNSVRMLVARDPA 99 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHH--------HHHHHHH--HCSEEEEEEEESCT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEeCCC
Confidence 5899999999999999 9 9999999999999999753211 2244443 47889999999765
No 271
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.31 E-value=6e-07 Score=77.18 Aligned_cols=60 Identities=7% Similarity=0.021 Sum_probs=52.4
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| +++||+|++|||++|.+ ++++.++|+... +.++|++.|...
T Consensus 38 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 100 (103)
T 2fcf_A 38 MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAG-NPVVFMVQSIIS 100 (103)
T ss_dssp ---EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SSEEEEEECCCC
T ss_pred CCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEECCC
Confidence 4579999999999999999 99999999999999998 999999999874 489999988653
No 272
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.30 E-value=3.2e-07 Score=81.24 Aligned_cols=61 Identities=18% Similarity=0.225 Sum_probs=47.7
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
.|++|..|.++|||++ | |++||+|++|||++|.+..... +..++.. .++++.|+|.|+|+.
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~g~~ 115 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEE--------AVAILKR--TKGTVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--CCSSEEEEEEECSCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCcc
Confidence 4899999999999999 9 9999999999999999542210 2233433 456799999998864
No 273
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.30 E-value=4.6e-07 Score=78.12 Aligned_cols=60 Identities=7% Similarity=0.033 Sum_probs=55.4
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
.+++|.+|.++++|..+|+++||+|++|||++|.+ ++++.++|+.. ++.+.|++.|+++.
T Consensus 29 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~g~~ 90 (103)
T 1v5l_A 29 QPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA-SYQLCLKIDRAETR 90 (103)
T ss_dssp EEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC-CSEEECEECCCTTT
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEECCeE
Confidence 36899999999999999999999999999999999 99999999987 88999999998753
No 274
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.30 E-value=1.1e-07 Score=83.44 Aligned_cols=66 Identities=11% Similarity=0.153 Sum_probs=51.8
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILNFN 427 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~~~ 427 (612)
..|++|..|.++|||++ | |++||+|++|||+++.++.... +..++.. .|+.+.|+|.|+++..+++
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~~~~~ 101 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSF--------AASVLRN--TKGRVRFMIGRERPGEQSE 101 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHH--------HHHHHHH--SCSSCEEEEEECCCCTTSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc--CCCeEEEEEEeCCCCCcch
Confidence 45899999999999999 9 9999999999999998765421 1223333 4888999999998754433
No 275
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.30 E-value=1.5e-06 Score=94.68 Aligned_cols=62 Identities=8% Similarity=-0.055 Sum_probs=57.0
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHh-CCCCeEEEEEeCCeEEE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVEN-CDDEFLKFDLEYDQVVV 583 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~-~~~~~~~l~~~r~~~~~ 583 (612)
.+++|.+|.++++|.++|++.||+|++|||++|.++.+|..++.. .+++.++|++.|+++..
T Consensus 282 ~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~V~R~g~~~ 344 (451)
T 3pv2_A 282 QGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTVKIIVERDNKPL 344 (451)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred ceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 689999999999999999999999999999999999999999997 55789999999986653
No 276
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.30 E-value=6e-07 Score=77.98 Aligned_cols=62 Identities=13% Similarity=0.252 Sum_probs=49.6
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
..|++|..|.++|||++ | |++||+|++|||+++.+..... +..++.. .|+.+.|+|.|+++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQ--------AVETLRN--TGQVVHLLLEKGQSP 104 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSH--------HHHHHHH--TTSEEEEEEECCCCS
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCcc
Confidence 46899999999999999 9 9999999999999999543321 2234433 589999999998753
No 277
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.30 E-value=8.7e-07 Score=75.29 Aligned_cols=51 Identities=20% Similarity=0.214 Sum_probs=41.5
Q ss_pred CcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCC
Q 007213 328 PLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG 388 (612)
Q Consensus 328 ~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~ 388 (612)
..+|+.+..+ +++ ...|++|..|.++|||++ ||++||+|++|||++|.++.
T Consensus 20 ~~~Gf~v~~~-~~~---------~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~ 71 (94)
T 3kzd_A 20 DTYGFSLSSV-EED---------GIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALN 71 (94)
T ss_dssp -CCSEEEEEE-CSS---------SSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCC
T ss_pred CCcCEEEEec-CCC---------CcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 3578888765 221 135899999999999999 99999999999999999753
No 278
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.30 E-value=3.7e-07 Score=80.84 Aligned_cols=61 Identities=10% Similarity=0.137 Sum_probs=48.5
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++. ..|+.+.|+|.|+|+
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEE--------AVAILK--NTSEVVYLKVGKPTT 115 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCc
Confidence 45899999999999999 9 9999999999999999543211 223443 347899999999775
No 279
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.29 E-value=6.5e-07 Score=75.01 Aligned_cols=58 Identities=17% Similarity=0.249 Sum_probs=47.5
Q ss_pred CccEEEEecCCCcccC--CCCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.+++|..|.++|||++ ||++||+|++|||+++. +|.++ ..++... .+ .+.|+|.|.++
T Consensus 25 ~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~----------~~~l~~~-~~-~v~l~v~r~~~ 86 (88)
T 1kwa_A 25 NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQL----------QKMLREM-RG-SITFKIVPSYR 86 (88)
T ss_dssp GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHH----------HHHHHHC-CE-EEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHhcC-CC-cEEEEEECCcC
Confidence 4789999999999998 69999999999999999 66553 3556554 44 89999998764
No 280
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.29 E-value=6.5e-07 Score=80.88 Aligned_cols=62 Identities=15% Similarity=0.162 Sum_probs=50.9
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ | |++||+|++|||+++.+...- .+..++.....|+.+.|+|.|+|.
T Consensus 65 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFE--------EVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHH--------HHHHHHHHTSSSSEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhcCCCCEEEEEEEcCCC
Confidence 4899999999999999 9 999999999999999875221 134666666678999999999763
No 281
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.28 E-value=7.1e-07 Score=79.60 Aligned_cols=66 Identities=8% Similarity=-0.036 Sum_probs=58.8
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCC-CCeEEEEEeCCeEEEEec
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCD-DEFLKFDLEYDQVVVLRT 586 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~-~~~~~l~~~r~~~~~l~~ 586 (612)
..+++|..|.++++|..+| ++.||+|++|||++|. +++++.++|+..+ ++.++|++.|++...++.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~~~ 112 (123)
T 1ueq_A 43 DEFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYPLPFDP 112 (123)
T ss_dssp SCCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCCCCCCS
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCCCCCC
Confidence 4569999999999999999 9999999999999998 7899999999875 789999999987665544
No 282
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.27 E-value=6.8e-07 Score=77.45 Aligned_cols=60 Identities=22% Similarity=0.305 Sum_probs=46.6
Q ss_pred CccEEEEecCCCcccC-C--CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCC--CCEEEEEEEEC
Q 007213 353 KGVRIRRVDPTAPESE-V--LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYT--GDSAAVKVLRD 420 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G--L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~--g~~v~l~V~R~ 420 (612)
.+++|..|.++|||++ | |++||+|++|||++|.++.... +..++..... +..+.|+|.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~--------~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQ--------VVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHH--------HHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHH--------HHHHHHhccccCCcEEEEEEEcC
Confidence 4799999999999999 9 9999999999999999876422 2234443322 34799999874
No 283
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.27 E-value=7e-07 Score=73.87 Aligned_cols=59 Identities=10% Similarity=0.049 Sum_probs=51.7
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|..+|+++||+|++|||+++.++ .++..+++.. ++.+.|++.|++
T Consensus 24 ~~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~ 84 (85)
T 1rgw_A 24 NMPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKSA-SYNLSLTLQKSK 84 (85)
T ss_dssp TSCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTTC-SSCEEEEEESCC
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 3468999999999999999999999999999999998 8888888764 456999998875
No 284
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.27 E-value=6.6e-07 Score=79.41 Aligned_cols=60 Identities=20% Similarity=0.237 Sum_probs=55.5
Q ss_pred CCceEEEeeec--ccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLV--ADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~--~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.+ +++|..+|++.||+|++|||++|.+| ++|.++|+.. ++.+.|++.|+++
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~-g~~v~l~v~R~g~ 106 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT-SQTLQLLIEHDPV 106 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC-SSCEEEEEEECSS
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC-CCEEEEEEEECCE
Confidence 46799999999 99999999999999999999999999 9999999987 7899999988764
No 285
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.27 E-value=8.6e-07 Score=79.30 Aligned_cols=61 Identities=11% Similarity=-0.045 Sum_probs=54.9
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHh-CCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVEN-CDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~-~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+|+++||+|++|||++|.++ +++.++|.+ .+++.++|++.|+++
T Consensus 50 ~~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 113 (124)
T 3tsv_A 50 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 113 (124)
T ss_dssp TSCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 4679999999999999999999999999999999999 999998887 567789999888754
No 286
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.27 E-value=6.8e-07 Score=77.82 Aligned_cols=56 Identities=20% Similarity=0.259 Sum_probs=46.8
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
.|++|..|.++|||++ ||++||+|++|||++|.+| .++ ..++.. .|+.+.|+|.|.
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~----------~~~l~~--~~~~v~l~v~~~ 103 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQV----------VNMIRQ--GGNTLMVKVVMV 103 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHH----------HHHHHH--TTTEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHh--CCCEEEEEEEEC
Confidence 4899999999999999 9999999999999999998 442 244443 378899999874
No 287
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.27 E-value=5.5e-07 Score=80.70 Aligned_cols=63 Identities=22% Similarity=0.377 Sum_probs=52.7
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~ 425 (612)
..|++|..|.++|||++ ||++||+|++|||+++.+ +.+ +..++... .++.+.++|.|+|+..+
T Consensus 32 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~~~-~~~~~~l~v~R~g~~~~ 97 (128)
T 2kjd_A 32 KPGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGD----------VVSAIRAG-GDETKLLVVDRETDEFF 97 (128)
T ss_dssp SCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHHHHTT-CSEEEEEEECHHHHHHH
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhC-CCCEEEEEEEeCCcceE
Confidence 35899999999999999 999999999999999998 555 33556554 77888899999887655
No 288
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.27 E-value=6.5e-07 Score=75.15 Aligned_cols=60 Identities=7% Similarity=0.024 Sum_probs=52.8
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|..|.++++|..+|+++||+|++|||+++.+ +.++.+++++..+..+.+.+.|++.
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~~r~~~ 88 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAALNAVRLLVVDPETD 88 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTCSSEEEEEEECCCCS
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCcEEEEEEcCCcc
Confidence 57999999999999999999999999999999998 7999999998766666666777654
No 289
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.26 E-value=2.4e-07 Score=82.43 Aligned_cols=62 Identities=16% Similarity=0.210 Sum_probs=48.7
Q ss_pred CccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEE
Q 007213 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKIL 424 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~ 424 (612)
.|++|..|.++|||++ ||++||+|++|||+++.++.... ...++.. .+++++|+|.|+|+..
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~r~g~~~ 116 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQ--------AVNLLKN--ASGSIEMQVVAGGDVS 116 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHH--------HHHHHHH--CCSEEEEEEECCTTSS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECCccc
Confidence 4899999999999986 89999999999999999864321 1233333 4778999999988654
No 290
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.26 E-value=1.5e-06 Score=71.97 Aligned_cols=58 Identities=7% Similarity=0.005 Sum_probs=51.7
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCC-CCeEEEEEeC
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCD-DEFLKFDLEY 578 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~-~~~~~l~~~r 578 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|. +++++.++++..+ ++.+.|++.|
T Consensus 24 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 24 DEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp TBCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 3568999999999999999 9999999999999999 5699999999865 6788888865
No 291
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.25 E-value=1.3e-06 Score=77.93 Aligned_cols=61 Identities=10% Similarity=0.205 Sum_probs=48.4
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
.|++|..|.++|||++ | |++||+|++|||++|.++.... ...++. ..++.+.|+|.|+++.
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQN--------ASAIIK--TAPSKVKLVFIRNEDA 113 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHH--------HHHHHH--HSCSEEEEEEEECTTH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeCCCc
Confidence 5899999999999999 9 9999999999999998765421 112232 2467899999998753
No 292
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=4.6e-07 Score=78.37 Aligned_cols=61 Identities=18% Similarity=0.314 Sum_probs=48.1
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .++.+.|+|.|++.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDH--------AVSLLTA--ASPTIALLLEREAG 99 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHH--------HHHHHTS--CCSCEEEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECCC
Confidence 35899999999999999 9 9999999999999998843211 2233333 37889999999753
No 293
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.25 E-value=9.7e-07 Score=73.64 Aligned_cols=59 Identities=8% Similarity=0.001 Sum_probs=49.4
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHh-CCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVEN-CDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~-~~~~~~~l~~~r~~~ 581 (612)
..++++..+ ++++|. +|+++||+|++|||++|.++ +++.+++++ .+++.+.|++.|+++
T Consensus 26 ~~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 26 GGGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQTR 87 (88)
T ss_dssp SSSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEECC
T ss_pred CCcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeCCc
Confidence 357888887 899999 99999999999999999987 999999985 467899999988764
No 294
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.25 E-value=9.5e-07 Score=76.94 Aligned_cols=61 Identities=5% Similarity=-0.056 Sum_probs=55.1
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhC--CCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENC--DDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~--~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| ++.||+|++|||+++.+ ++++.++|+.+ +.+.++|++.|.+.
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCC
Confidence 4679999999999999999 99999999999999999 99999999987 55679999988653
No 295
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.25 E-value=9.2e-07 Score=79.58 Aligned_cols=61 Identities=13% Similarity=0.187 Sum_probs=50.5
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
.|++|..|.++|||++ | |++||+|++|||++|.++..- .+..++.....|+.+.|+|.|++
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~--------~~~~~l~~~~~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHA--------QVVKIFQSIPIGASVDLELCRGY 105 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHH--------HHHHHHHHSCTTEEEEEEEEECS
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHhCCCCCeEEEEEEeCC
Confidence 4799999999999999 9 999999999999999875321 13456666656899999999976
No 296
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.25 E-value=7.3e-07 Score=74.57 Aligned_cols=60 Identities=15% Similarity=0.099 Sum_probs=52.8
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+|+++||+|++|||++|. ++.++.++++.. ++.+.|++.|++.
T Consensus 26 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 87 (89)
T 2q3g_A 26 NVPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRAC-GERLSLGLSRAIT 87 (89)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHTC-TTEEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEeCCC
Confidence 45689999999999999999999999999999999 568999888865 6789999988764
No 297
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=5.2e-07 Score=79.73 Aligned_cols=61 Identities=20% Similarity=0.283 Sum_probs=48.8
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
.|++|..|.++|||++ | |++||+|++|||+++.++.... +..++.. .++.+.|+|.|+++.
T Consensus 49 ~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 49 IGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEE--------VQSIISQ--QSGEAEICVRLDLNM 111 (117)
T ss_dssp EEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHH--------HHHHHSC--CSSCEEEEEESSCCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHH--------HHHHHhc--CCCEEEEEEEECCcc
Confidence 4899999999999999 9 9999999999999998753311 2233333 678899999998753
No 298
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=98.24 E-value=2.2e-06 Score=89.37 Aligned_cols=61 Identities=13% Similarity=0.067 Sum_probs=55.9
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhCCCCeEEEEEeCCeEEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENCDDEFLKFDLEYDQVVV 583 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~~~~~~~l~~~r~~~~~ 583 (612)
..+++|.+|.++++|.++|+++||+|++|||++|.++++|.++|+. ++.+.|++.|+++..
T Consensus 255 ~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~l~~~l~~--~~~v~l~v~R~g~~~ 315 (325)
T 1lcy_A 255 QHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT--QSQLAVQIRRGRETL 315 (325)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHTT--CSSEEEEEEETTEEE
T ss_pred CCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHhC--CCeEEEEEEECCEEE
Confidence 4689999999999999999999999999999999999999999986 578999999987654
No 299
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.24 E-value=1.4e-06 Score=76.09 Aligned_cols=58 Identities=3% Similarity=-0.106 Sum_probs=52.3
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCC
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
.+++|.+|.++++|..+|++.||+|++|||++|. +++++.++|+...++.++|++.|.
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~~~~~~v~l~V~~~ 103 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKSFGEDEIEMKVVSL 103 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTTTTSCEEEEEESC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEEC
Confidence 4588999999999999999999999999999999 669999999987777789988765
No 300
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.24 E-value=4.8e-07 Score=78.84 Aligned_cols=61 Identities=11% Similarity=0.258 Sum_probs=48.7
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhccC-CCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKY-TGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~~~-~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||+++.+ +.+ +..++.... .+..+.|+|.|.++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~----------~~~~l~~~~~~~~~v~l~v~R~~~ 97 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDD----------AVRVLRDIVHKPGPIVLTVAKSGG 97 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHH----------HHHHHHHHHTSSSCEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhcccCCCeEEEEEEeCCC
Confidence 46899999999999999 9 99999999999999998 444 335555441 23469999999764
No 301
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.23 E-value=2.2e-06 Score=76.58 Aligned_cols=59 Identities=7% Similarity=0.027 Sum_probs=53.6
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|..+| +++||+|++|||++|.+ ++++.++|+... +.++|++.|..
T Consensus 58 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~ 119 (123)
T 2iwq_A 58 MRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKAG-NPVVFMVQSII 119 (123)
T ss_dssp CCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SSEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 4679999999999999999 99999999999999998 999999999864 58999988764
No 302
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.23 E-value=8.5e-07 Score=77.57 Aligned_cols=58 Identities=22% Similarity=0.234 Sum_probs=46.1
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
.+++|..|.++|||++ ||++||+|++|||++|.+| .++ ..++.. ..+..+.|+|.|..
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv----------~~~i~~-~~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEV----------MKLLKS-FGEDEIEMKVVSLL 104 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHH----------HHHHHT-TTTSCEEEEEESCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHh-CCCCeEEEEEEECC
Confidence 4788999999999999 9999999999999999966 443 344443 23445899998754
No 303
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.23 E-value=1.3e-06 Score=74.49 Aligned_cols=58 Identities=7% Similarity=-0.079 Sum_probs=53.4
Q ss_pred ceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 523 FPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 523 ~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
+++|..|.++++|..+|++.||+|++|||++|. ++.++..+++ .+++.+.|++.|+++
T Consensus 35 g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~-~~g~~v~l~v~r~~~ 94 (99)
T 3khf_A 35 HHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLL-KSGNKISLRTTALEN 94 (99)
T ss_dssp EEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEECSCS
T ss_pred CeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh-cCCCEEEEEEEECCC
Confidence 678999999999999999999999999999999 8999999999 467899999998764
No 304
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.23 E-value=1.6e-06 Score=74.61 Aligned_cols=59 Identities=7% Similarity=-0.001 Sum_probs=53.1
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|..|.++++|..+|+++||+|++|||+++.+ ++++.++++..+++.+.|++.|.
T Consensus 44 ~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 44 DKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp CCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTCTTCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEcC
Confidence 567999999999999999999999999999999965 67999999887778999988763
No 305
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.23 E-value=1.3e-06 Score=77.69 Aligned_cols=60 Identities=7% Similarity=0.079 Sum_probs=54.3
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCC-CCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCD-DEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~-~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|..+| +++||+|++|||++|.+ ++++.++++..+ ++.++|++.|++
T Consensus 57 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 57 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEECC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 3579999999999999999 99999999999999998 699999999864 788999998875
No 306
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.23 E-value=8.9e-07 Score=76.80 Aligned_cols=61 Identities=15% Similarity=0.219 Sum_probs=48.7
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||+++.++.... +..++.. .++.+.|+|.|++.
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNF--------AATVLRN--TKGNVRFVIGREKP 101 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHH--------HHHHHHH--CCSEEEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHhc--CCCeEEEEEEeCCC
Confidence 35899999999999999 9 9999999999999998755421 2233333 57899999999653
No 307
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.22 E-value=8.3e-07 Score=76.51 Aligned_cols=61 Identities=7% Similarity=0.048 Sum_probs=54.4
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCC-CCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCD-DEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~-~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| +++||+|++|||++|.+ ++++.++|+..+ ++.++|++.|++.
T Consensus 33 ~~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 33 GQPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp TSCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCCC
Confidence 4578999999999999999 99999999999999965 899999999865 7899999988653
No 308
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.22 E-value=1.1e-06 Score=75.30 Aligned_cols=58 Identities=14% Similarity=0.180 Sum_probs=52.1
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|++|.++++|..+| +++||+|++|||++|.+ ++++.++|+.. ++.++|++.+.
T Consensus 35 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~-~~~v~L~V~~~ 95 (97)
T 2ejy_A 35 KQSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET-KGMISLKVIPN 95 (97)
T ss_dssp TCCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC-CEEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 3579999999999999999 99999999999999996 99999999975 56888888654
No 309
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.22 E-value=1.5e-06 Score=75.92 Aligned_cols=61 Identities=10% Similarity=-0.002 Sum_probs=56.0
Q ss_pred CCceEEEeeecccccccccc-cccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEE-IVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~-~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+|+ +.||+|++|||+++.+ ++++.++++..+++.+.|++.|+++
T Consensus 25 ~~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~ 88 (112)
T 1qau_A 25 KPPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPE 88 (112)
T ss_dssp SSCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHHSCSSSEEEEEEECCT
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCcEEEEEEeCCc
Confidence 34799999999999999998 9999999999999999 9999999998778899999988753
No 310
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.22 E-value=2.7e-06 Score=76.23 Aligned_cols=63 Identities=13% Similarity=0.067 Sum_probs=56.1
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHh-CCCCeEEEEEeCCeEEEEe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVEN-CDDEFLKFDLEYDQVVVLR 585 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~-~~~~~~~l~~~r~~~~~l~ 585 (612)
..+++|.+|.++++|..+ ++.||+|++|||++|.+|.+|.+++.. .+++.+.|++ |+++.-+.
T Consensus 24 ~~gv~V~~V~~~spA~~a-L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~~~v~ 87 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKV-LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGTFHLK 87 (125)
T ss_dssp CCCEEEEEECSSSGGGGT-SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEEEEEE
T ss_pred CCceEEEEECCCChHHHh-cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCEEEEE
Confidence 567999999999999999 999999999999999999999999985 5678999999 99883333
No 311
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.22 E-value=3.4e-07 Score=78.73 Aligned_cols=60 Identities=13% Similarity=0.189 Sum_probs=48.4
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ | |++||+|++|||+++.++.... +..++. ..|+.+.|+|.|+|+
T Consensus 36 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHAR--------AIELIK--SGGRRVRLLLKRGTG 97 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHH--------HHHHHH--HHCSEECEEEECTTC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECCC
Confidence 4899999999999999 9 9999999999999999874311 223333 357899999999875
No 312
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.22 E-value=1e-06 Score=77.44 Aligned_cols=59 Identities=10% Similarity=-0.017 Sum_probs=53.7
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|..|.++++|..+|+++||+|++|||++|.++ .++.++++.. ++.+.|++.|++
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~ 97 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRKS-GNSVTLLVLDGD 97 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHHT-CSEEEEEEECHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEECC
Confidence 4679999999999999999999999999999999884 9999999874 789999998875
No 313
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.22 E-value=8.9e-07 Score=78.50 Aligned_cols=61 Identities=21% Similarity=0.287 Sum_probs=49.3
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .++.+.|+|.|+++
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~~ 108 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQD--------AVDLFRN--AGYAVSLRVQHRLQ 108 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHH--------HHHHHHH--HCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEeCCc
Confidence 46899999999999999 9 9999999999999999976311 2233333 47889999999765
No 314
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.22 E-value=1e-06 Score=76.82 Aligned_cols=64 Identities=6% Similarity=0.044 Sum_probs=56.5
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhC-CCCeEEEEEeCCeEEEE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENC-DDEFLKFDLEYDQVVVL 584 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~-~~~~~~l~~~r~~~~~l 584 (612)
..+++|..|.++++|..+| +++||+|++|||++|.+ ++++.++++.. ++..+.|++.|+++.++
T Consensus 38 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~~~ 105 (111)
T 2koj_A 38 SAPIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEAFH 105 (111)
T ss_dssp SSCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCCCCC
T ss_pred CcCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCCcc
Confidence 3679999999999999999 99999999999999965 59999999986 47899999999876544
No 315
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.22 E-value=1e-06 Score=78.45 Aligned_cols=60 Identities=15% Similarity=0.303 Sum_probs=55.2
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCC-CCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCD-DEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~-~~~~~l~~~r~~~ 581 (612)
..++|.+|.++++|..+| +++||+|++|||++|.+ ++++.++|+..+ ++.++|++.|++.
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 108 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVA 108 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECCc
Confidence 458999999999999999 99999999999999988 999999999876 7899999988764
No 316
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.21 E-value=2.8e-06 Score=92.17 Aligned_cols=63 Identities=13% Similarity=0.143 Sum_probs=57.0
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhC-CCCeEEEEEeCCeEEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENC-DDEFLKFDLEYDQVVV 583 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~-~~~~~~l~~~r~~~~~ 583 (612)
..+++|.+|.++++|..+|++.||+|++|||++|.++.++..++... +++.++|++.|+++..
T Consensus 262 ~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 325 (436)
T 4a8c_A 262 QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPL 325 (436)
T ss_pred CcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 46799999999999999999999999999999999999999999864 5679999999987643
No 317
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.21 E-value=1.1e-06 Score=74.28 Aligned_cols=60 Identities=17% Similarity=0.112 Sum_probs=49.3
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|..|.++++|..+|++.||+|++|||++|.++ +++.++|+...+....+.+.+++.
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRKGGDQTTLLVLDKELE 90 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHTTTTEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCeEEEEEECCccc
Confidence 479999999999999999999999999999999999 999999998554444444445543
No 318
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.21 E-value=1.1e-06 Score=75.53 Aligned_cols=60 Identities=23% Similarity=0.423 Sum_probs=47.8
Q ss_pred CCccEEEEecCCCcccCCCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
..|++|..|.++|||++||++||+|++|||+++.++.... +...+. ..|+.+.|+|.|+.
T Consensus 42 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 42 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHGQ--------AVSLLK--TFQNTVELIIVREV 101 (103)
T ss_dssp CCSEECCCBSSSSTTSSSCCTTCEEEEETTEECSSCCHHH--------HHHHHH--HCCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCchHHCCCCCCEEEEECCEECCCCCHHH--------HHHHhh--cCCCeEEEEEEecC
Confidence 4689999999999998899999999999999998865421 112232 35889999999863
No 319
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.21 E-value=1.3e-06 Score=74.00 Aligned_cols=60 Identities=10% Similarity=0.030 Sum_probs=52.4
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+|+++||+|++|||++|.++ .++..+++. .++.+.|++.|+++
T Consensus 31 ~~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 31 SAPLTISRVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKG-CHDHLTLSVSSGPS 92 (94)
T ss_dssp TSCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHT-CCSCEEEEEECCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 3568999999999999999999999999999999985 777888876 56789999988764
No 320
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.20 E-value=2.6e-06 Score=73.10 Aligned_cols=58 Identities=10% Similarity=0.066 Sum_probs=52.6
Q ss_pred CceEEEeeeccccccc-ccccccceeEeeCCeec--CCHHHHHHHHHhC-CCCeEEEEEeCC
Q 007213 522 SFPWFCKVLVADINIG-YEEIVNTQVLAFNGNPV--KNLKSLANMVENC-DDEFLKFDLEYD 579 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~-~g~~~gd~I~~vng~~v--~~~~~l~~~l~~~-~~~~~~l~~~r~ 579 (612)
.+++|.+|.++++|.. .|++.||+|++|||++| .+++++.++|+.. .++.++|++.|.
T Consensus 37 ~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 3589999999999999 66999999999999999 8999999999986 678899998874
No 321
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.20 E-value=1.3e-06 Score=74.07 Aligned_cols=62 Identities=8% Similarity=-0.005 Sum_probs=52.5
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHh-CCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVEN-CDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~-~~~~~~~l~~~r~~~~ 582 (612)
..+++|..|.++++|..+|+++||+|++|||++|.++.++..+... .+++.+.|++.|+++.
T Consensus 33 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 33 DEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERET 95 (97)
T ss_dssp BCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECCSSC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeCCcc
Confidence 5679999999999999999999999999999999998876544332 3678999999998753
No 322
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.20 E-value=9e-07 Score=75.89 Aligned_cols=59 Identities=20% Similarity=0.246 Sum_probs=46.5
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
.+++|..|.++|||++ ||++||+|++|||++|.+|..-. +..++.. .++++.|+|.|++
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~ 95 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVE--------LAHEIRS--CPSEIILLVWRVS 95 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHH--------HHHHHHH--CSSEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECC
Confidence 4788999999999999 99999999999999999763211 2244443 3567999999975
No 323
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.20 E-value=8.6e-07 Score=74.40 Aligned_cols=37 Identities=24% Similarity=0.471 Sum_probs=34.2
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCC
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDG 388 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~ 388 (612)
..|++|..|.++|||++ ||++||+|++|||+++.++.
T Consensus 26 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~ 63 (91)
T 1g9o_A 26 KLGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKET 63 (91)
T ss_dssp CSSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCC
Confidence 35899999999999999 99999999999999999854
No 324
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.20 E-value=2e-06 Score=74.23 Aligned_cols=58 Identities=12% Similarity=0.051 Sum_probs=53.4
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|..+|++.||+|++|||++|.+ ++++.++|+. ++.+.|++.|+.
T Consensus 40 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~v~l~v~r~~ 99 (104)
T 1wi2_A 40 QLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT--AREISMRVRFFS 99 (104)
T ss_dssp CCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH--SSSEEEEEECCC
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCEEEEEEEECC
Confidence 357999999999999999999999999999999999 9999999997 678999998864
No 325
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.19 E-value=2.4e-06 Score=72.37 Aligned_cols=60 Identities=18% Similarity=0.138 Sum_probs=53.8
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|. ++.++.++++. .++.+.|++.|++.
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN-TGQVVHLLLEKGQS 94 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEECCSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEcCCC
Confidence 4579999999999999999 9999999999999999 67999999986 57889999988753
No 326
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.19 E-value=8.3e-07 Score=76.76 Aligned_cols=59 Identities=10% Similarity=-0.005 Sum_probs=52.4
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHH--HHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLK--SLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~--~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|..|.++++|..+|++.||+|++|||++|.++. ++.++++. .++.++|++.|++
T Consensus 25 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 85 (106)
T 3ngh_A 25 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK-SGNSVTLLVLDGD 85 (106)
T ss_dssp CCSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHHH-TTTEEEEEEECHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCEEEEEEEECC
Confidence 45789999999999999999999999999999999887 99999984 5778999887754
No 327
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.19 E-value=1.5e-06 Score=76.60 Aligned_cols=61 Identities=26% Similarity=0.351 Sum_probs=47.7
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++. ..|+.+.|+|.|.+.
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~~~--~~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSE--------AVEAIK--NAGNPVVFIVQSLSS 111 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHH--------HHHHHH--TSCSSEEEEECCBSC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECCC
Confidence 35899999999999999 9 9999999999999998765311 122333 357889999988543
No 328
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.19 E-value=1.5e-06 Score=76.78 Aligned_cols=61 Identities=10% Similarity=0.116 Sum_probs=55.4
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|..+| +++||+|++|||++|. +++++.++++.. +..++|++.|++..
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~~~ 116 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKNT-SEVVYLKVGKPTTI 116 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCcc
Confidence 4579999999999999999 9999999999999999 899999999965 68899999988753
No 329
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.19 E-value=1.6e-06 Score=76.65 Aligned_cols=60 Identities=8% Similarity=0.052 Sum_probs=54.1
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
.+++|.+|.++++|..+| +++||+|++|||++|. ++.++.++++... +.++|++.|+++.
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~g~~ 115 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKRTK-GTVTLMVLSSDET 115 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SSEEEEEEECSCE
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCcc
Confidence 579999999999999999 9999999999999999 8999999999765 4699999888754
No 330
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.18 E-value=2.4e-06 Score=72.64 Aligned_cols=59 Identities=10% Similarity=0.135 Sum_probs=53.5
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|..|.++++|..+| ++.||+|++|||++|. +++++.++++ ..++.+.|++.|+++
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~-~~g~~v~l~v~R~~~ 91 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ-MAGETVTLKIKKQTD 91 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH-TCCSEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEeCCC
Confidence 579999999999999999 9999999999999997 4799999998 467899999988864
No 331
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.18 E-value=2.1e-06 Score=75.32 Aligned_cols=59 Identities=10% Similarity=0.134 Sum_probs=54.2
Q ss_pred ceEEEeeeccccccc-ccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 523 FPWFCKVLVADINIG-YEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 523 ~v~v~~v~~~~~~~~-~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
.++|.+|.++++|.. +|+++||+|++|||++|.+ ++++.++|+. .++.+.|++.|+++.
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD-AGLSVTLRIIPQEEL 105 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH-TTTEEEEEECCCSCC
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCcC
Confidence 479999999999999 9999999999999999999 6999999997 788999999988653
No 332
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.18 E-value=1.6e-06 Score=74.14 Aligned_cols=59 Identities=12% Similarity=0.012 Sum_probs=52.2
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+|+++||+|++|||++|.+ +.++.+.++. ++.+.|++.|+++
T Consensus 35 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~--~~~v~l~v~R~g~ 95 (100)
T 2eeh_A 35 GLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLTS--SSRLHMMVRRMGS 95 (100)
T ss_dssp TCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHHS--CSSEEEEEEECSC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhcC--CCEEEEEEEECCc
Confidence 357999999999999999999999999999999998 4777787775 6889999998874
No 333
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.18 E-value=2.3e-06 Score=73.41 Aligned_cols=59 Identities=12% Similarity=0.031 Sum_probs=52.8
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|..|.++++|..+|++.||+|++|||++|.+ ++++.+++++ .++.+.|++.|++
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 89 (102)
T 2d90_A 29 QKGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK-GGDQTTLLVLDKE 89 (102)
T ss_dssp SSSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHH-STTEEEEEECSTT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEECC
Confidence 467999999999999999999999999999999998 5899999987 4789999997653
No 334
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.18 E-value=7.8e-07 Score=75.75 Aligned_cols=60 Identities=17% Similarity=0.165 Sum_probs=47.0
Q ss_pred CCccEEEEecCCCcccCCCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
..+++|..|.++|||+.||++||+|++|||++|.+..... +..++.. .|+.+.|+|.|++
T Consensus 30 ~~~~~V~~V~~~spA~agL~~GD~Il~ing~~v~~~~~~~--------~~~~~~~--~g~~v~l~v~R~~ 89 (96)
T 2edv_A 30 SLPLTVVAVTAGGSAHGKLFPGDQILQMNNEPAEDLSWER--------AVDILRE--AEDSLSITVVRCT 89 (96)
T ss_dssp SSSCBCCCBCSSSSSTTTSCTTCBEEEESSCBSTTCCHHH--------HHHHHHH--CSSCEEEEEEECC
T ss_pred CCCeEEEEECCCCchhhCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEECC
Confidence 3489999999999995599999999999999998864321 1122322 6889999999976
No 335
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.18 E-value=1.1e-06 Score=77.37 Aligned_cols=61 Identities=23% Similarity=0.267 Sum_probs=48.4
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
.|++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. .++.+.|+|.|+++.
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~~~ 105 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEE--------AITALRQ--TPQKVRLVVYRDEAH 105 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHH--------HHHHHHT--CCSEEEEEEECCSSC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEeCCcc
Confidence 5899999999999999 9 9999999999999999864211 2233332 458899999998763
No 336
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.18 E-value=7.8e-06 Score=73.71 Aligned_cols=59 Identities=12% Similarity=0.174 Sum_probs=53.4
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhC-CCCeEEEEEeCCe
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENC-DDEFLKFDLEYDQ 580 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~-~~~~~~l~~~r~~ 580 (612)
.+++|..|.++++|..+| +++||+|++|||++|.+ ++++.++|+.+ +++.++|++.|++
T Consensus 65 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g 127 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSG 127 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCC
Confidence 479999999999999999 99999999999999975 69999999987 5688999998864
No 337
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.18 E-value=1.4e-06 Score=71.82 Aligned_cols=57 Identities=16% Similarity=0.122 Sum_probs=51.1
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCC
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
.+++|..|.++++|..+|++.||+|++|||++|.++ +++.++++.. ++.++|++.|+
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~ 81 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGKC-SGVLHMVIAEG 81 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTTC-SSCEEEEEECC
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEcC
Confidence 458899999999999999999999999999999999 9999999765 46689998886
No 338
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.17 E-value=1.7e-06 Score=75.11 Aligned_cols=60 Identities=8% Similarity=0.006 Sum_probs=54.4
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+| +++||+|++|||++|.+ +.++.++++. .++.+.|++.|+++
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~~ 105 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN-AGNPVRLLLIRRLP 105 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH-HCSEEEEEEEECCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCc
Confidence 4579999999999999999 99999999999999998 7899999987 67899999988764
No 339
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.17 E-value=1.2e-06 Score=77.00 Aligned_cols=57 Identities=25% Similarity=0.383 Sum_probs=48.5
Q ss_pred ccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 354 GVRIRRVDPTAPESE--VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 354 G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
+++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++.. .|+.+.|+|.|+++
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~g~~v~l~v~r~~~ 104 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHAD----------IVKLIKD--AGLSVTLRIIPQEE 104 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHH----------HHHHHHH--TTTEEEEEECCCSC
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCeEEEEEEeCCc
Confidence 679999999999997 9999999999999999885 44 3355554 78999999999875
No 340
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.17 E-value=1.6e-06 Score=75.63 Aligned_cols=60 Identities=5% Similarity=0.061 Sum_probs=55.3
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCC---CCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCD---DEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~---~~~~~l~~~r~~~ 581 (612)
.+++|.+|.++++|..+| ++.||+|++|||+++.+ ++++.++|++++ +..++|++.|+++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCCC
Confidence 368999999999999999 99999999999999997 999999999988 7899999998753
No 341
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.17 E-value=2.5e-06 Score=72.38 Aligned_cols=58 Identities=10% Similarity=0.172 Sum_probs=52.3
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|.+|.++++|..+|+++||+|++|||++|.+ ++++.++|+.. ++.+.|++.++
T Consensus 36 ~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~v~l~v~~~ 95 (96)
T 2ego_A 36 EMVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKAS-GNVLRLETLYG 95 (96)
T ss_dssp CEEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT-TTEEEEEEECC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEEC
Confidence 357899999999999999999999999999999999 69999999987 45888888764
No 342
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.17 E-value=1.4e-06 Score=76.40 Aligned_cols=58 Identities=5% Similarity=-0.066 Sum_probs=52.8
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCC
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
.+++|..|.++++|..+|++.||+|++|||++|. +++++.++|+...++.+.|++.|.
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~~~~~v~l~V~~~ 95 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSFGGEEVEMKVVSL 95 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHTTTSEECEEEECE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEec
Confidence 4588999999999999999999999999999999 999999999988877888888653
No 343
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.16 E-value=2.5e-06 Score=71.69 Aligned_cols=60 Identities=17% Similarity=-0.002 Sum_probs=51.6
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
.+++|..|.++++|..+|++.||+|++|||++|.+ +.++.++++.. ++.+.|++.|++..
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~~~ 85 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSC-PSEIILLVWRMVPQ 85 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-SSEEEEEEEECC--
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCCC
Confidence 45899999999999999999999999999999995 68999999864 46789999887654
No 344
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.16 E-value=6.8e-07 Score=79.04 Aligned_cols=57 Identities=23% Similarity=0.352 Sum_probs=47.7
Q ss_pred ccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 354 GVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 354 G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
+++|..|.++|||++ | |++||+|++|||++|.+ +.+ +..++. ..|+.+.|+|.|+++
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~----------~~~~l~--~~g~~v~l~v~r~~~ 103 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLE----------ATKLLA--SISEKVRLEILPVPQ 103 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHH----------HHHHHH--SCSSEEEEEECCBTT
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHH--hCCCeEEEEEEECCC
Confidence 599999999999999 9 99999999999999954 444 335555 368999999999875
No 345
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.16 E-value=1.6e-06 Score=76.32 Aligned_cols=60 Identities=8% Similarity=0.103 Sum_probs=55.1
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC---CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK---NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~---~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| +++||+|++|||++|. ++.++.++++. .++.+.|++.|+++
T Consensus 48 ~~gv~V~~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~R~~~ 111 (117)
T 2o2t_A 48 ELGIFVQEIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK-AKDTVQLVIARGSL 111 (117)
T ss_dssp CEEEEECCCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH-CCSEEEEEEESSCC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCEEEEEEEeCCc
Confidence 3579999999999999999 9999999999999999 99999999987 57899999998864
No 346
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.15 E-value=2.3e-06 Score=73.71 Aligned_cols=60 Identities=12% Similarity=-0.015 Sum_probs=53.6
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|.+ +.++.++++. .++.+.|++.|+++
T Consensus 37 ~~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g~ 99 (104)
T 2djt_A 37 DTPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA-GGPQLHLVIRRPLS 99 (104)
T ss_dssp ECCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH-TCSEEEEEECCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECCC
Confidence 3569999999999999999 99999999999999988 6888888887 57899999998865
No 347
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.15 E-value=2.8e-07 Score=82.57 Aligned_cols=59 Identities=15% Similarity=0.260 Sum_probs=49.0
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||++|. ++.+ +..++.. .|+.+.|+|.|+++
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQ----------VIALIQN--SDTTLELSVMPKDS 121 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHH----------HHHHHHT--CTTEEEEECCCCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCEEEEEEEECCC
Confidence 45899999999999999 99999999999999998 5444 2355544 38999999999875
No 348
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.15 E-value=2.5e-06 Score=74.29 Aligned_cols=60 Identities=8% Similarity=0.032 Sum_probs=51.1
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHH--HHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLK--SLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~--~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+|+++||+|++|||++|.++. +....++. .++.+.|++.|+++
T Consensus 45 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~g~ 106 (110)
T 1x5q_A 45 DEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRG-AGTAVQMRVWRESG 106 (110)
T ss_dssp CCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHS-CCSEEEEEEEECSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhC-CCCeEEEEEEECCc
Confidence 56799999999999999999999999999999999954 44445554 67899999999864
No 349
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.15 E-value=1.4e-06 Score=77.92 Aligned_cols=60 Identities=8% Similarity=0.015 Sum_probs=55.3
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|..|.++++|..+|++.||+|++|||++|.+ ++++.++|+...+..+.+.+.|+++
T Consensus 33 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~g~ 94 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAGGDETKLLVVDRETD 94 (128)
T ss_dssp CSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTTCSEEEEEEECHHHH
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCEEEEEEEeCCc
Confidence 47999999999999999999999999999999999 9999999998877788899888764
No 350
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.15 E-value=6.7e-07 Score=74.92 Aligned_cols=62 Identities=18% Similarity=0.260 Sum_probs=46.5
Q ss_pred hhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhccCCCCEEEEEEEE
Q 007213 345 AMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (612)
Q Consensus 345 ~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R 419 (612)
.+|+.- ..|++|..|.++|||++ | |+.||+|++|||+++. ++.+ +..++.. .++++.|++.+
T Consensus 14 ~~G~~~-~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~----------~~~~i~~--~~~~v~L~v~~ 79 (88)
T 3e17_A 14 EYGLRL-GSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTD----------ARKLIEK--SRGKLQLVVLR 79 (88)
T ss_dssp CCCEEE-EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH----------HHHHHHH--TTTEEEEEECC
T ss_pred CCCEEE-eCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCeEEEEEeC
Confidence 455543 34899999999999999 9 9999999999999995 4444 2344544 34578887765
No 351
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.15 E-value=1.4e-06 Score=75.42 Aligned_cols=57 Identities=16% Similarity=0.228 Sum_probs=46.4
Q ss_pred ccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 354 GVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 354 G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
+++|..|.++|||++ ||++||+|++|||++|.++ .+ +..++.. .|+.+.|+|.|.+.
T Consensus 44 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~----------~~~~l~~--~g~~v~l~v~r~~~ 103 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQ----------VVDLIRA--GEKELILTVLSVES 103 (107)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH----------HHHHHHH--CSSEEEEEEECSSC
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHc--CCCEEEEEEEcCCC
Confidence 457999999999999 9999999999999999954 44 2344443 58899999999654
No 352
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.15 E-value=8.1e-06 Score=87.16 Aligned_cols=72 Identities=17% Similarity=0.224 Sum_probs=57.1
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE---EEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK---ILNFN 427 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~---~~~~~ 427 (612)
..+++|..|.++|||++ ||++||+|++|||++|.+|..- .+..++. ...|+++.|+|.|+|+ .++++
T Consensus 98 ~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~--------~~~~~l~-~~~g~~v~l~v~r~g~~~~~~~~~ 168 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLY--------DVSDLLQ-GEADSQVEVVLHAPGAPSNTRTLQ 168 (388)
T ss_dssp SSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHH--------HHHHHHC-BSTTCEEEEEEEETTEEEEEEEEE
T ss_pred CCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHH--------HHHHHHh-cCCCCEEEEEEEeCCCCcceEEEE
Confidence 45899999999999999 9999999999999999997310 0224443 4578999999999998 66666
Q ss_pred EEecc
Q 007213 428 ITLAT 432 (612)
Q Consensus 428 v~l~~ 432 (612)
++...
T Consensus 169 l~r~~ 173 (388)
T 1fc6_A 169 LTRQK 173 (388)
T ss_dssp EECBC
T ss_pred EEEce
Confidence 66543
No 353
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.15 E-value=2.7e-06 Score=71.69 Aligned_cols=60 Identities=12% Similarity=0.139 Sum_probs=52.7
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeec--CCHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPV--KNLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v--~~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| ++.||+|++|||+++ .+++++.++|++..+ .++|++.+..+
T Consensus 27 ~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~~~~~ 89 (93)
T 3o46_A 27 TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQSQG-AITFKIIPGSK 89 (93)
T ss_dssp TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHCCE-EEEEEEECC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCC-eEEEEEEeCCC
Confidence 4578999999999999999 999999999999999 899999999998764 88888877543
No 354
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.14 E-value=1.4e-06 Score=74.91 Aligned_cols=59 Identities=12% Similarity=0.117 Sum_probs=52.4
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|.+|.++++|..+|+++||+|++|||++|.++ .++..+++.. ++.+.|++.|+++
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~g~ 89 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKAC-TGSLNMTLQRASA 89 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHHC-SSEEEEEECCCSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCC
Confidence 458999999999999999999999999999999987 7778888765 6789999998875
No 355
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.14 E-value=7.4e-07 Score=80.05 Aligned_cols=62 Identities=13% Similarity=0.156 Sum_probs=49.6
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhcc-----CCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQK-----YTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~-----~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ | |++||+|++|||+.+.+...-. +..++... ..++.+.|+|.|++.
T Consensus 55 ~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHE--------AMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHH--------HHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 4899999999999999 9 9999999999999998854210 23455443 357899999999864
No 356
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.13 E-value=3.2e-06 Score=71.25 Aligned_cols=59 Identities=8% Similarity=0.124 Sum_probs=52.1
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|..+| +++||+|++|||++|.+ +.++.++++... +.++|++.|++
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~g 93 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKNTS-DMVYLKVAKPG 93 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHTCC-SEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEcCC
Confidence 4579999999999999999 99999999999999988 588888888654 58999998875
No 357
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.13 E-value=4.2e-06 Score=73.22 Aligned_cols=61 Identities=11% Similarity=0.122 Sum_probs=53.8
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|.+ +.++.++++. .++.++|++.|++..
T Consensus 48 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 48 NMDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN-GGRRVRLFLKRGETS 111 (112)
T ss_dssp TCCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT-TTTEEEEEEECCEEE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCcc
Confidence 4579999999999999999 99999999999999976 5788888886 567899999998764
No 358
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.13 E-value=1.3e-06 Score=83.44 Aligned_cols=61 Identities=15% Similarity=0.193 Sum_probs=50.5
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~ 425 (612)
.|++|..|.++|||++ | |++||+|++|||++|.+ |.+ +..++.. .++.+.|+|.|+++...
T Consensus 130 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~----------~~~~l~~--~~~~v~l~v~R~~~~~~ 194 (196)
T 3gsl_A 130 NSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHED----------AVAALKN--TYDVVYLKVAKPSNAET 194 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHH----------HHHHHHS--CCEEEEEEEEEESCCCE
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHH----------HHHHHHc--CCCeEEEEEeCCCCccc
Confidence 5899999999999999 9 99999999999999998 544 2345543 47889999999886543
No 359
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.13 E-value=2.6e-06 Score=73.58 Aligned_cols=59 Identities=14% Similarity=0.115 Sum_probs=53.6
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|..|.++++|..+| +++||+|++|||++|.+ +.++.++++.. ++.++|++.|+.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~ 98 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTAA-SPTIALLLEREA 98 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTSC-CSCEEEEEEECC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECC
Confidence 4579999999999999999 99999999999999988 99999999876 678999998864
No 360
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.13 E-value=1.6e-06 Score=77.65 Aligned_cols=62 Identities=10% Similarity=-0.001 Sum_probs=57.0
Q ss_pred CceEEEeeecccccccccc-cccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeEEE
Q 007213 522 SFPWFCKVLVADINIGYEE-IVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQVVV 583 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~-~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~~~ 583 (612)
.+++|..|.++++|..+|+ +.||+|++|||+++.+ ++++.++++..+++.+.|++.|+++..
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~R~g~~~ 97 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRGIASETHVVLILRGPEGF 97 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHSCCSSCEEEEEECCCCSE
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEeCCceE
Confidence 4789999999999999999 9999999999999999 999999999877889999999987643
No 361
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.12 E-value=2e-06 Score=72.36 Aligned_cols=60 Identities=22% Similarity=0.267 Sum_probs=46.7
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
..|++|..|.++|||++ | |++||+|++|||+++.++.... +..++.. .++.+.|+|.|++
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~r~~ 90 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEK--------AVELLKA--AQGSVKLVVRSGP 90 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHH--------HHHHHHH--CCSEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCcEEEEEEeCC
Confidence 45899999999999999 7 9999999999999999763211 2233333 3568999998865
No 362
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.12 E-value=2.5e-06 Score=77.12 Aligned_cols=60 Identities=18% Similarity=0.275 Sum_probs=48.0
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .|+.+.|+|.|.+.
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~--~g~~v~l~v~~~~~ 125 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQ--------VVNMIRQ--GGNTLMVKVVMVTR 125 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHH--------HHHHHHH--TTTEEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCEEEEEEEECCC
Confidence 4899999999999999 99999999999999998754321 2234433 67889999998654
No 363
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.12 E-value=8.4e-07 Score=79.60 Aligned_cols=57 Identities=23% Similarity=0.295 Sum_probs=47.0
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeC---CCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA---NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~---s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
.|++|..|.++|||++ | |++||+|++|||++|. ++.+ +..++.. .++.+.|+|.|++
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~----------~~~~l~~--~~~~v~l~v~r~~ 115 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQ----------AIALLQQ--TTGSLRLIVAREP 115 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHH----------HHHHHHH--CCSEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHH----------HHHHHHc--CCCeEEEEEEcCC
Confidence 4899999999999999 9 9999999999999997 3333 2244443 6789999999975
No 364
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.12 E-value=7.8e-07 Score=77.68 Aligned_cols=60 Identities=17% Similarity=0.193 Sum_probs=49.1
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccC--CCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKY--TGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~--~g~~v~l~V~R~G~ 422 (612)
.+++|..|.+++||++ | |++||+|++|||+++.++ .+ +..++.... .+..++|+|.|+++
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~----------~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEE----------AKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHH----------HHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHH----------HHHHHHccccCCCceEEEEEEeCCC
Confidence 3799999999999999 9 999999999999999874 33 335555543 47889999999874
No 365
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.12 E-value=3.6e-07 Score=80.91 Aligned_cols=63 Identities=21% Similarity=0.214 Sum_probs=47.7
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
..|++|..|.++|||++ | |++||+|++|||++|.++.... +..++.. ..+..+.+++.|+++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~l~~-~~~~~~~l~v~R~~~~ 105 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHD--------ALAILRQ-AREPRQAVIVTRKLTP 105 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHH--------HHHHHHH-TTSSSEEEEEEECCCS
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh-CCCCeEEEEEEcCCCc
Confidence 35899999999999999 9 9999999999999998643211 2233333 3455567888998864
No 366
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.12 E-value=2.7e-06 Score=76.30 Aligned_cols=58 Identities=7% Similarity=0.072 Sum_probs=53.4
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhC-CCCeEEEEEeCC
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENC-DDEFLKFDLEYD 579 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~-~~~~~~l~~~r~ 579 (612)
.+++|..|.++++|..+| +++||+|++|||++|. +++++.++|+.. +++.++|++.|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 458899999999999999 9999999999999995 999999999984 578999999998
No 367
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=2.3e-06 Score=72.03 Aligned_cols=58 Identities=14% Similarity=0.160 Sum_probs=52.0
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeec-CCHHHHHHHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPV-KNLKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v-~~~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|.+|.++++|..+| ++.||+|++|||++| .+++++.++|+.. ++.+.|++.|.
T Consensus 28 ~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~~-~~~v~l~v~~~ 87 (91)
T 2e7k_A 28 GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRNA-SGSVILKILSG 87 (91)
T ss_dssp SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHTC-CSSBCEEEECC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 4679999999999999987 999999999999999 9999999999975 56788888764
No 368
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.12 E-value=1.7e-06 Score=83.18 Aligned_cols=58 Identities=19% Similarity=0.224 Sum_probs=48.7
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||++|.+ |.++ ..++.. |+.+.|+|.|+|+
T Consensus 109 ~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~----------~~~l~~---~~~v~l~v~r~g~ 169 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEV----------INLIRT---EKTVSIKVRHIGL 169 (192)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHH----------HHHHTS---SSEEEEEEEECCE
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHcC---CCeEEEEEEECCc
Confidence 34899999999999999 999999999999999998 4432 233333 8999999999987
No 369
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.12 E-value=7.7e-07 Score=77.75 Aligned_cols=60 Identities=20% Similarity=0.208 Sum_probs=47.2
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
..|++|..|.++|||++ | |++||+|++|||++|.+..... +..++. ..++.+.|+|.|+.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~--------~~~~l~--~~g~~v~l~v~r~~ 104 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGE--------AVQLLR--SVGDTLTVLVCDGF 104 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHH--------HHHHHS--SCSSEEEECCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEECC
Confidence 46899999999999999 9 9999999999999999643211 223333 36788999998865
No 370
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.11 E-value=3.1e-06 Score=72.53 Aligned_cols=57 Identities=9% Similarity=0.061 Sum_probs=51.0
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeec--CCHHHHHHHHHhC--CCCeEEEEEe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPV--KNLKSLANMVENC--DDEFLKFDLE 577 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v--~~~~~l~~~l~~~--~~~~~~l~~~ 577 (612)
...++|.+|.++++|..+|+++||+|++|||++| .+|+++.++++++ +++.+.|.+.
T Consensus 38 ~~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 38 NKAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 4568999999999999999999999999999998 4999999999984 7788888763
No 371
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.11 E-value=1.8e-06 Score=72.25 Aligned_cols=58 Identities=7% Similarity=0.162 Sum_probs=51.8
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeec--CCHHHHHHHHHhCCC-CeEEEEEeCC
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPV--KNLKSLANMVENCDD-EFLKFDLEYD 579 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v--~~~~~l~~~l~~~~~-~~~~l~~~r~ 579 (612)
.+++|.+|.++++|..+| +++||+|++|||++| .++.++.++++..++ +.++|++.|.
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~ 88 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQT 88 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEec
Confidence 468999999999999999 999999999999999 679999999998653 4889988775
No 372
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.10 E-value=1.8e-06 Score=76.56 Aligned_cols=59 Identities=24% Similarity=0.343 Sum_probs=46.7
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
..|++|..|.++|||++ | |++||+|++|||+++.++.... +..++.. .++++.|+|.|.
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~--------~~~~l~~--~~~~v~L~v~R~ 112 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSE--------AVALLKR--TSSSIVLKALEV 112 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHH--------HHHHHHS--CCSEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEEC
Confidence 45899999999999999 9 9999999999999999443211 2244443 478899999984
No 373
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.10 E-value=4.2e-06 Score=70.60 Aligned_cols=59 Identities=12% Similarity=0.127 Sum_probs=49.6
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHH--HHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSL--ANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l--~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+|++.||+|++|||++|.++.++ .+.++ .++.++|++.|++.
T Consensus 28 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~--~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 28 DRIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHLEVVKLIK--SGAYVALTLLGSSS 88 (93)
T ss_dssp SSSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHHHHHHHHT--SSSEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc--CCCEEEEEEEECCC
Confidence 4579999999999999999999999999999999987544 44443 47899999988753
No 374
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.10 E-value=3.4e-06 Score=70.55 Aligned_cols=57 Identities=19% Similarity=0.194 Sum_probs=44.9
Q ss_pred CccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEE
Q 007213 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R 419 (612)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++. ..++.+.|+|.|
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~r 88 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDE--------AVQALK--KTGKEVVLEVKY 88 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCeEEEEEEE
Confidence 5899999999999986 79999999999999999864321 112222 357889999987
No 375
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.10 E-value=2.9e-06 Score=74.62 Aligned_cols=70 Identities=14% Similarity=0.148 Sum_probs=50.7
Q ss_pred CCcCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-C-CCCCCEEEEECCEEe--CCCCCCccccCccchHHH
Q 007213 327 FPLLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSY 402 (612)
Q Consensus 327 ~~~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V--~s~~~v~~~~~~~~~~~~ 402 (612)
.+.+|+.+..- . ....+++|..|.++|||++ | |++||+|++|||++| .++.++ ..
T Consensus 35 ~~~lG~~l~~~-~----------~~~~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~----------~~ 93 (114)
T 2gzv_A 35 QNLIGISIGGG-A----------QYCPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEV----------AK 93 (114)
T ss_dssp TSCCSEEEEEC-C----------C--CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHH----------HH
T ss_pred CCcEeEEEEeC-C----------CCCCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH----------HH
Confidence 35678877643 1 1124799999999999999 9 999999999999999 666553 24
Q ss_pred HhhccCCCCEEEEEEEE
Q 007213 403 LVSQKYTGDSAAVKVLR 419 (612)
Q Consensus 403 ~l~~~~~g~~v~l~V~R 419 (612)
++.. .++.+.|+|.+
T Consensus 94 ~l~~--~~~~v~l~v~~ 108 (114)
T 2gzv_A 94 MIQE--VKGEVTIHYNK 108 (114)
T ss_dssp HHHH--CCSEEEEEEEC
T ss_pred HHHc--CCCeEEEEEEe
Confidence 4443 23567787764
No 376
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.10 E-value=2.2e-06 Score=75.67 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=54.0
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
.+++|.+|.++++|..+| +++||+|++|||++|.+ +.++.++|+. .++.++|++.|++.+
T Consensus 49 ~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 49 IGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQ-QSGEAEICVRLDLNM 111 (117)
T ss_dssp EEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSC-CSSCEEEEEESSCCC
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc-CCCEEEEEEEECCcc
Confidence 469999999999999999 99999999999999976 7999999987 567899999998764
No 377
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.10 E-value=2.7e-06 Score=76.35 Aligned_cols=60 Identities=13% Similarity=0.179 Sum_probs=55.5
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+| +++||+|++|||++|.+ ++++.++|+. .+..+.|.+.|+++
T Consensus 45 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~ 107 (129)
T 2dmz_A 45 ASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN-AGQVVHLTLVRRKT 107 (129)
T ss_dssp CCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH-CCSSEEEEEEEESS
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCc
Confidence 4679999999999999999 99999999999999999 9999999998 78899999988764
No 378
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.09 E-value=2.4e-06 Score=73.21 Aligned_cols=59 Identities=8% Similarity=0.164 Sum_probs=46.5
Q ss_pred CccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.+++|..|.++|||++ ||++||+|++|||++|.++ ... +..++.. .++.+.|+|.|+++
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~-~~~--------~~~~~~~--~~~~v~l~v~R~~~ 95 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS-RQE--------ALILIKG--SFRILKLIVRRRNS 95 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC-SHH--------HHHHHHT--CCSSCEEEEEECCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch-HHH--------HHHHHHh--CCCeEEEEEEeCCC
Confidence 4789999999999987 7999999999999999985 210 1223332 46889999999875
No 379
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.09 E-value=3e-06 Score=72.64 Aligned_cols=60 Identities=13% Similarity=0.030 Sum_probs=53.8
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| +++||+|++|||++|.+ +.++..+++. .++.+.|++.|++.
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~~ 95 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE-AGPVVRLVVRRRQP 95 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH-SCSEEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 4679999999999999999 99999999999999977 8889999987 56899999988764
No 380
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.09 E-value=3.1e-06 Score=73.57 Aligned_cols=59 Identities=7% Similarity=0.077 Sum_probs=53.8
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|.+|.++++|..+| +++||+|++|||++|.+ ++++.++|+..+++.++|++.|.
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~R~ 104 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHLGICSG 104 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcC
Confidence 4679999999999999999 99999999999999965 99999999998777899998875
No 381
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.09 E-value=4.1e-06 Score=71.17 Aligned_cols=59 Identities=14% Similarity=0.128 Sum_probs=52.4
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|..|.++++|..+| +++||+|++|||+++.+ +.++.++++... +.+.|++.|++.
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~ 91 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQTP-QRVRLTLYRDEA 91 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTCC-SEEEEEEEECSS
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEcCCC
Confidence 579999999999999999 99999999999999987 678888888654 889999988764
No 382
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.09 E-value=1.7e-06 Score=76.26 Aligned_cols=61 Identities=21% Similarity=0.284 Sum_probs=48.1
Q ss_pred CCccEEEEecCCCcccCCCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESEVLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||+.||++||+|++|||++|.++.... +..++.. .++.+.|+|.|.++
T Consensus 45 ~~gv~V~~V~~~spA~~gL~~GD~I~~Vng~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~R~~~ 105 (117)
T 2csj_A 45 ETSIVISDVLPGGPADGLLQENDRVVMVNGTPMEDVLHSF--------AVQQLRK--SGKIAAIVVKRPRK 105 (117)
T ss_dssp CCBCEEEEECTTSSHHHHBCTTCEEEEESSCBCBTCCHHH--------HHHHHHH--SCSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCCcccccCCCCCEEEEECCEECCCcCHHH--------HHHHHhc--CCCeEEEEEEECCc
Confidence 4589999999999996599999999999999998865421 1233333 58899999999654
No 383
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.09 E-value=3.7e-06 Score=73.76 Aligned_cols=60 Identities=12% Similarity=0.148 Sum_probs=54.0
Q ss_pred CCceEEEeeecccccccccc-cccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEE-IVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~-~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+|+ +.||+|++|||++|. +++++.++|+... +.++|++.|+++
T Consensus 47 ~~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~r~~~ 109 (113)
T 1va8_A 47 MDSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDMH-GTLTFVLIPSSG 109 (113)
T ss_dssp SSSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-EEEEEEEECCCC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECCc
Confidence 45799999999999999999 999999999999999 7889999998765 578999988764
No 384
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.09 E-value=5.6e-06 Score=70.43 Aligned_cols=58 Identities=9% Similarity=0.060 Sum_probs=50.6
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCC-CCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCD-DEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~-~~~~~l~~~r~~~ 581 (612)
.+++|..|.+. +..+|+++||+|++|||++|.+ ++++.++|+.++ ++.++|++.|+++
T Consensus 32 ~Gv~V~~v~~~--a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 92 (96)
T 1ujv_A 32 TGQRVKQILDI--QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGSG 92 (96)
T ss_dssp TEEEEEEESCG--GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCSS
T ss_pred CCEEEEEEecc--cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCC
Confidence 46889999873 5689999999999999999986 499999999875 8899999999864
No 385
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.09 E-value=1.2e-06 Score=75.72 Aligned_cols=61 Identities=13% Similarity=0.270 Sum_probs=47.6
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .++.+.++|.|.+.
T Consensus 31 ~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~r~~~ 92 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEE--------VVEKVKK--SGSRVMFLLVDKET 92 (106)
T ss_dssp CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHH--------HHHHHHH--HCSEEEEEECCTTT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCeEEEEEEcCch
Confidence 35899999999999999 99999999999999998764321 1233322 47789999998764
No 386
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.08 E-value=3.2e-06 Score=72.36 Aligned_cols=60 Identities=13% Similarity=0.111 Sum_probs=52.4
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|.++ .++.++++.. ++.+.|++.|+++
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 98 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA-GYAVSLRVQHRLE 98 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHTC-CSEEEEEEEEESC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeCCC
Confidence 4579999999999999999 999999999999999875 8888888864 6789999987653
No 387
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.08 E-value=3e-06 Score=74.95 Aligned_cols=61 Identities=10% Similarity=0.053 Sum_probs=54.7
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+| +++||+|++|||++|. ++.++.++++..++..+.+.+.|++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~~~~~l~v~R~~~ 104 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQAREPRQAVIVTRKLT 104 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHTTSSSEEEEEEECCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEEEEEcCCC
Confidence 4579999999999999999 9999999999999999 69999999998887777788877754
No 388
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.07 E-value=3.7e-06 Score=75.54 Aligned_cols=61 Identities=7% Similarity=0.021 Sum_probs=55.1
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCC-CCeEEEEEeCCeEE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCD-DEFLKFDLEYDQVV 582 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~-~~~~~l~~~r~~~~ 582 (612)
.+++|.+|.++++|..+| ++.||+|++|||++|. +++++.++|+..+ ++.++|++.|+...
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 107 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYPL 107 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSCC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 468999999999999999 9999999999999998 5789999999876 77899999988753
No 389
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.07 E-value=3.8e-06 Score=72.69 Aligned_cols=61 Identities=13% Similarity=-0.009 Sum_probs=52.4
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHh-CCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVEN-CDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~-~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|. +|+++||+|++|||++|.++.++..++.. ..++.+.|++.|+++.
T Consensus 38 ~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~ 99 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGG 99 (107)
T ss_dssp CCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEESCC
T ss_pred CCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEECCCC
Confidence 4579999999999999 99999999999999999999888776654 4577899999887643
No 390
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.07 E-value=4.2e-06 Score=72.47 Aligned_cols=60 Identities=18% Similarity=0.320 Sum_probs=47.0
Q ss_pred CCccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 352 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
..|++|..|.++|||++ ||++||+|++|||++|.+..... +..++.. .++.+.|+|.|++
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~--------~~~~~~~--~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQ--------AVEAFKT--AKEPIVVQVLRRT 101 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHH--------HHHHHHH--CCSSEEEEEEECC
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCcEEEEEEeCC
Confidence 46899999999999987 79999999999999997754321 1123332 5788999999975
No 391
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.07 E-value=1.9e-06 Score=75.89 Aligned_cols=70 Identities=19% Similarity=0.176 Sum_probs=51.4
Q ss_pred CCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccC
Q 007213 330 LGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKY 408 (612)
Q Consensus 330 lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~ 408 (612)
+|+.+..+ +.+ + ..|++|..|.++|||++ ||++||+|++|||++|.++.. . .+..++.
T Consensus 31 ~G~~v~~~-~~~-----~----~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~-~-------~~~~~l~--- 89 (114)
T 2d8i_A 31 YGFSLSSV-EED-----G----IRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNS-S-------MLKDFLS--- 89 (114)
T ss_dssp CCCEEEEE-EET-----T----EEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCH-H-------HHHHHHT---
T ss_pred cCEEEEec-CcC-----C----cCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCH-H-------HHHHHHh---
Confidence 58877765 221 1 14899999999999999 999999999999999998641 0 0223343
Q ss_pred CCCEEEEEEEECC
Q 007213 409 TGDSAAVKVLRDS 421 (612)
Q Consensus 409 ~g~~v~l~V~R~G 421 (612)
+..+.|+|.|..
T Consensus 90 -~~~v~l~v~R~p 101 (114)
T 2d8i_A 90 -QPSLGLLVRTYP 101 (114)
T ss_dssp -SSEEEEEEEECC
T ss_pred -CCcEEEEEEECC
Confidence 347888888854
No 392
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.07 E-value=3.7e-06 Score=74.26 Aligned_cols=61 Identities=10% Similarity=0.054 Sum_probs=54.9
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeec--CCHHHHHHHHHhCCCCeEEEEEeCCeEEE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPV--KNLKSLANMVENCDDEFLKFDLEYDQVVV 583 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v--~~~~~l~~~l~~~~~~~~~l~~~r~~~~~ 583 (612)
.+++|.+|.++++|..+| +++||+|++|||++| .+++++.++|++ .++.++|++.|+++..
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~~~~ 105 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS-ISEKVRLEILPVPQSQ 105 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS-CSSEEEEEECCBTTBC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCeEEEEEEECCCCC
Confidence 349999999999999999 999999999999999 789999999995 6789999999876543
No 393
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.07 E-value=4.1e-06 Score=72.78 Aligned_cols=57 Identities=12% Similarity=0.169 Sum_probs=51.1
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCC
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
.+++|..|.++++|..+|++.||+|++|||++|.++ +++.++++.. ++.+.|++.|.
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~~~ 103 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQG-GNTLMVKVVMV 103 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT-TTEEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCEEEEEEEEC
Confidence 479999999999999999999999999999999999 9999999875 67788887553
No 394
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.06 E-value=2.1e-06 Score=73.52 Aligned_cols=58 Identities=17% Similarity=0.024 Sum_probs=51.0
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
.+++|..|.++++|..+|+++||+|++|||++|. ++.++.++++... +.++|++.|+.
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~ 95 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRSCP-SEIILLVWRVS 95 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHHCS-SEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 4588999999999999999999999999999999 5699999998764 45889988764
No 395
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.06 E-value=2.4e-06 Score=72.27 Aligned_cols=61 Identities=16% Similarity=0.148 Sum_probs=52.7
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|..+| +++||+|++|||++|.+ +.+....++. .++.+.|.+.|+++.
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 28 EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQA-SGERVNLTIARPGKP 91 (95)
T ss_dssp SCSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEEEESCS
T ss_pred CCCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcCCcC
Confidence 4579999999999999999 99999999999999976 6777777775 478999999887653
No 396
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.06 E-value=1.4e-06 Score=78.00 Aligned_cols=60 Identities=12% Similarity=0.173 Sum_probs=54.8
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+|+++||+|++|||++|. +++++.++|+.. ++.++|++.|+++
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQNS-DTTLELSVMPKDS 121 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHTC-TTEEEEECCCCCC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCEEEEEEEECCC
Confidence 35689999999999999999999999999999998 999999999975 7899999988764
No 397
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.06 E-value=5.2e-06 Score=71.65 Aligned_cols=61 Identities=10% Similarity=0.144 Sum_probs=53.0
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|.+ +.++..+++.. ++.+.|++.|++..
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~~~ 95 (105)
T 2awx_A 32 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKNT-SDFVYLKVAKPTSM 95 (105)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHSC-CSEEEEEEECCCC-
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEcCCCC
Confidence 4579999999999999999 99999999999999965 77888888765 68999999887654
No 398
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.06 E-value=1e-06 Score=77.25 Aligned_cols=56 Identities=27% Similarity=0.422 Sum_probs=45.6
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhccCCCCEEEEEEEE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R 419 (612)
.+++|..|.++|||++ ||++||+|++|||++|. +|.++ ..++.. ..++.+.|+|.|
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~----------~~~i~~-~~~~~v~l~V~~ 94 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEV----------MKLLKS-FGGEEVEMKVVS 94 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHH----------HHHHHH-TTTSEECEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHh-CCCceEEEEEEe
Confidence 4788999999999999 99999999999999999 66663 345544 345678888876
No 399
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.06 E-value=4.9e-06 Score=70.01 Aligned_cols=54 Identities=13% Similarity=0.214 Sum_probs=48.9
Q ss_pred EEEeeecccccccccccccceeEeeCCeec--CCHHHHHHHHHhCCCCeEEEEEeCC
Q 007213 525 WFCKVLVADINIGYEEIVNTQVLAFNGNPV--KNLKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 525 ~v~~v~~~~~~~~~g~~~gd~I~~vng~~v--~~~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
+|++|.++++|..+|++.||+|++|||++| .+++++.++|++. ++.+.|++.+.
T Consensus 34 ~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~-g~~v~l~v~p~ 89 (90)
T 1y7n_A 34 IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSNA-VGEIHMKTMPA 89 (90)
T ss_dssp EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHHC-CEEEEEEEECC
T ss_pred EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 899999999999999999999999999999 5899999999964 67888887653
No 400
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.05 E-value=2.2e-06 Score=73.40 Aligned_cols=60 Identities=12% Similarity=-0.012 Sum_probs=50.7
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHh-CCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVEN-CDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~-~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+|+++||+|++|||++|.++.+. +++.. ..++.+.|++.|+++
T Consensus 34 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-~~~~~~~~~~~v~l~v~R~g~ 94 (101)
T 1uez_A 34 GVGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHA-EAVKALKGSKKLVLSVYSAGR 94 (101)
T ss_dssp TCCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHH-HHHHHSSSSSSCCEEECCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHH-HHHHhhcCCCeEEEEEEECCc
Confidence 4579999999999999999999999999999999999884 45554 345678899988864
No 401
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.05 E-value=2.2e-06 Score=72.29 Aligned_cols=59 Identities=14% Similarity=0.259 Sum_probs=45.8
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEe--CCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDI--ANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V--~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..+++|..|.++|||++ | |++||+|++|||+++ .++.++ ..++.. .++.+.|+|.|..+
T Consensus 27 ~~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~~~~v~l~v~~~~~ 89 (93)
T 3o46_A 27 TGAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEI----------IQILAQ--SQGAITFKIIPGSK 89 (93)
T ss_dssp TCCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHH----------HHHHHH--CCEEEEEEEECC--
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHh--CCCeEEEEEEeCCC
Confidence 35899999999999999 9 999999999999999 555443 355544 33588999988654
No 402
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.05 E-value=3e-06 Score=74.70 Aligned_cols=62 Identities=18% Similarity=0.116 Sum_probs=53.9
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHh-CCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVEN-CDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~-~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|..+|+++||+|++|||++|.++.++..++.. ..++.+.|++.|+++.
T Consensus 41 ~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~ 103 (117)
T 1uit_A 41 KGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNPHV 103 (117)
T ss_dssp TSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEECCCSCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCch
Confidence 4579999999999999999999999999999999999888777643 4577899999988653
No 403
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.05 E-value=2.3e-06 Score=82.63 Aligned_cols=62 Identities=27% Similarity=0.471 Sum_probs=51.6
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKILN 425 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~~~ 425 (612)
..|++|..|.++|||++ | |++||+|++|||++|. ++.++ ..++.. .++.+.|+|.|+++.++
T Consensus 134 ~~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~----------~~~l~~--~~~~v~l~v~R~~~~~~ 199 (200)
T 2qt5_A 134 SRPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEA----------MSILKQ--CGQEATLLIEYDVSVMD 199 (200)
T ss_dssp CEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHH----------HHHHHT--TCSEEEEEEEEEEEC--
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHc--CCCeEEEEEEECCccCC
Confidence 35899999999999999 9 9999999999999999 76663 355554 78999999999887543
No 404
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.04 E-value=2.3e-06 Score=91.48 Aligned_cols=61 Identities=16% Similarity=0.266 Sum_probs=51.1
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||++|.+. .+ +..++.....|+.++|+|.|+|+
T Consensus 30 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e----------~~~~l~~~~~g~~v~l~v~r~~~ 93 (391)
T 3tsz_A 30 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREE----------AVLFLLDLPKGEEVTILAQKKKD 93 (391)
T ss_dssp TTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHH----------HHHHHHHSCTTSEEEEEEEECHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhhcCCCeEEEEEeeCCc
Confidence 35999999999999999 9999999999999999873 33 33555555689999999999863
No 405
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.04 E-value=3.6e-06 Score=73.00 Aligned_cols=60 Identities=18% Similarity=0.135 Sum_probs=54.7
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|. ++.++..+++.. ++.++|++.|++.
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 103 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRNT-GQVVHLLLEKGQS 103 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHHT-TSEEEEEEECCCC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 4679999999999999999 9999999999999999 889999999874 7899999999864
No 406
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.04 E-value=5.5e-06 Score=69.99 Aligned_cols=60 Identities=8% Similarity=0.066 Sum_probs=52.8
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.+++++..+| ++.||+|++|||++|.++ .++.++++. .+..+.|++.|+++
T Consensus 32 ~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~g~ 94 (97)
T 2iwn_A 32 PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH-TGQTVLLTLMRRGE 94 (97)
T ss_dssp CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT-CCSEEEEEEEEEEE
T ss_pred CCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCC
Confidence 4679999999999999999 999999999999999964 777888876 67899999988764
No 407
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.03 E-value=3.8e-06 Score=73.76 Aligned_cols=61 Identities=11% Similarity=0.072 Sum_probs=54.4
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeEEE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQVVV 583 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~~~ 583 (612)
.+++|.+|.++++|..+| ++.||+|++|||++|.+ +.++.++++... +.++|++.|++...
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~~~-~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQTP-QKVRLVVYRDEAHY 106 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHTCC-SEEEEEEECCSSCC
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CeEEEEEEeCCccc
Confidence 579999999999999999 99999999999999988 789999998755 88999999887543
No 408
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.03 E-value=7e-06 Score=68.73 Aligned_cols=58 Identities=7% Similarity=-0.029 Sum_probs=49.2
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHH--HHHHHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLK--SLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~--~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|..|.++++|..+|+++||+|++|||+++.++. ++..+++. .++.+.|++.|+
T Consensus 31 ~~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~ 90 (91)
T 1m5z_A 31 EKGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIAE-SGNKLDLVISRN 90 (91)
T ss_dssp SSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT-STTEEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEeC
Confidence 36799999999999999999999999999999999964 45566664 467888988775
No 409
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.03 E-value=1.8e-06 Score=74.50 Aligned_cols=73 Identities=16% Similarity=0.280 Sum_probs=50.4
Q ss_pred cCCeEEeeecChhhHHhhhcccCCCccEEEEecCCCcccC-CCCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhh
Q 007213 329 LLGVEWQKMENPDLRVAMSMKADQKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVS 405 (612)
Q Consensus 329 ~lGi~~~~~~~~~~~~~lgl~~~~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~ 405 (612)
-+|+.+... ....... .....|++|..|.++|||++ ||++||+|++|||++|. ++.+ +..++.
T Consensus 28 ~~G~~l~~~-~~~~~~~---~~~~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~----------~~~~l~ 93 (104)
T 2z17_A 28 TFGFEIQSY-RPQNQNA---CSSEMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQ----------VVDLIR 93 (104)
T ss_dssp CCSEEEEEC-CCCCCSS---SCCSCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHH----------HHHHHH
T ss_pred CccEEEEee-ecccCCc---ccCCCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHH----------HHHHHH
Confidence 357777754 2211111 11245899999999999999 99999999999999999 4444 335555
Q ss_pred ccCCCCEEEEEE
Q 007213 406 QKYTGDSAAVKV 417 (612)
Q Consensus 406 ~~~~g~~v~l~V 417 (612)
.. ++++.|+|
T Consensus 94 ~~--~~~v~l~v 103 (104)
T 2z17_A 94 SS--GNLLTIET 103 (104)
T ss_dssp HT--TTEEEEEC
T ss_pred hC--CCcEEEEE
Confidence 54 34777765
No 410
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.03 E-value=4.7e-06 Score=75.03 Aligned_cols=60 Identities=7% Similarity=0.018 Sum_probs=54.3
Q ss_pred CCceEEEeeecccccccc-cccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGY-EEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~-g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|..+ |++.||+|++|||+++.+ ++++.++|+..++..+.|.+.|++
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVIRRKS 118 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEEEEES
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEEEeCC
Confidence 356999999999999999 999999999999999987 799999999988888999987764
No 411
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.03 E-value=4.5e-06 Score=70.09 Aligned_cols=60 Identities=13% Similarity=0.155 Sum_probs=52.0
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| +++||+|++|||+++.+ ..++..+++. .++.++|++.|.+.
T Consensus 28 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 28 DTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKC-SLGTVTLEVGRIST 90 (92)
T ss_dssp SCSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH-CCSEEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEcccc
Confidence 4579999999999999999 99999999999999976 5788888876 46789999988753
No 412
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.03 E-value=5.5e-06 Score=74.31 Aligned_cols=59 Identities=19% Similarity=0.212 Sum_probs=53.3
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeec--CCHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPV--KNLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v--~~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|++|.++++|..+| ++.||+|++|||++| .+++++.++++.. ++.++|++.|+++
T Consensus 65 ~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 65 PGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIAN-SRNLIITVRPANQ 126 (128)
T ss_dssp EEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHHT-TTSEEEEEECCCC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECCc
Confidence 479999999999999999 899999999999999 8899999999865 4569999988864
No 413
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.03 E-value=7.1e-06 Score=71.05 Aligned_cols=59 Identities=10% Similarity=0.137 Sum_probs=52.5
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|..+| +++||+|++|||++|. ++.++..+++.. ++.++|++.|++
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~v~l~v~R~~ 92 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKNT-SDFVYLKVAKPG 92 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHSC-CSEEEEEEECCS
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhCC-CCeEEEEEEeCC
Confidence 4579999999999999999 9999999999999995 588889999864 569999999975
No 414
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.02 E-value=9.8e-06 Score=68.45 Aligned_cols=57 Identities=7% Similarity=-0.015 Sum_probs=50.1
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|.+|.++++|.+ |+++||+|++|||++|.+ +.++..+++. .++.++|++.|+
T Consensus 34 ~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 92 (95)
T 1mfg_A 34 DDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT-FQNTVELIIVRE 92 (95)
T ss_dssp CCCEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHHH-CCSEEEEEEEEE
T ss_pred CCCEEEEEECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhhc-CCCeEEEEEEeC
Confidence 46799999999999999 999999999999999987 6777788774 468899998875
No 415
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.01 E-value=7.4e-06 Score=68.45 Aligned_cols=57 Identities=14% Similarity=0.115 Sum_probs=51.0
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeec--CCHHHHHHHHHhCCCCeEEEEEeCC
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPV--KNLKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v--~~~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
.+++|.+|.++++|..+| ++.||+|++|||+++ .+++++.++|+... +.++|++.+.
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~~-~~v~L~v~~~ 80 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKSR-GKLQLVVLRD 80 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHTT-TEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEeCC
Confidence 369999999999999999 999999999999999 89999999999865 5788887554
No 416
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.01 E-value=7.2e-06 Score=70.87 Aligned_cols=57 Identities=14% Similarity=0.149 Sum_probs=51.5
Q ss_pred ceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 523 FPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 523 ~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
+++|..|.++++|..+|++.||+|++|||++|. +++++.+++++ .++.+.|++.|..
T Consensus 44 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 44 LQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRA-GEKELILTVLSVE 102 (107)
T ss_dssp CEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH-CSSEEEEEEECSS
T ss_pred ceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEcCC
Confidence 356999999999999999999999999999999 88999999996 4788999998764
No 417
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.01 E-value=7.8e-06 Score=70.58 Aligned_cols=61 Identities=8% Similarity=0.079 Sum_probs=54.3
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|. ++.++..+++. .++.+.|++.|++..
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR-TSSVVTLEVAKQGAI 100 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT-CCSEEEEEEECCCSS
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEeCCcc
Confidence 4579999999999999999 9999999999999998 58888888876 578999999988753
No 418
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=97.99 E-value=5.8e-06 Score=74.08 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=53.5
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecC---CHHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK---NLKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~---~~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
.+++|.+|.++++|..+| ++.||+|++|||++|. +++++.++|+. .+..++|++.|+.
T Consensus 54 ~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~r~~ 115 (128)
T 2db5_A 54 VDIFVKDVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ-TTGSLRLIVAREP 115 (128)
T ss_dssp EEEEEECCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH-CCSEEEEEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCeEEEEEEcCC
Confidence 479999999999999999 9999999999999998 99999999997 5688999998874
No 419
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.99 E-value=2.5e-06 Score=74.44 Aligned_cols=60 Identities=18% Similarity=0.275 Sum_probs=48.0
Q ss_pred CccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ | |++||+|++|||++|.++.... +..++. ..++.+.|+|.|+++
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQ--------AAAALK--RAGQSVTIVAQYRPE 100 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHH--------HHHHHH--SCCSEEEEEEECCHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--hCCCcEEEEEEECcc
Confidence 5899999999999999 9 9999999999999999985321 122332 367889999998753
No 420
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.98 E-value=7.3e-06 Score=71.40 Aligned_cols=60 Identities=13% Similarity=0.174 Sum_probs=53.0
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+| ++.||+|++|||++|. +++++.++++.. ++.+.|++.|++.
T Consensus 37 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~-g~~v~l~v~R~~~ 99 (111)
T 2dlu_A 37 TSGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRNC-GNSVRMLVARDPA 99 (111)
T ss_dssp SSSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHHH-CSEEEEEEEESCT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEeCCC
Confidence 3579999999999999999 9999999999999999 569999999874 6789999987653
No 421
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=97.98 E-value=7.9e-06 Score=72.35 Aligned_cols=58 Identities=5% Similarity=-0.078 Sum_probs=52.5
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|.+|.++++|..+| +++||+|++|||+++. +++++.++++.. ++.++|++.|.
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~~-~~~v~L~v~R~ 112 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKRT-SSSIVLKALEV 112 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHSC-CSEEEEEEEEE
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 4579999999999999999 9999999999999999 999999999975 57788888764
No 422
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.98 E-value=1.1e-05 Score=67.77 Aligned_cols=59 Identities=14% Similarity=0.141 Sum_probs=51.6
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|. ++.++.++++... +.+.|++.|+.
T Consensus 29 ~~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r~~ 90 (93)
T 2dkr_A 29 NSPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKAAQ-GSVKLVVRSGP 90 (93)
T ss_dssp SCCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHHCC-SEEEEEECCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEeCC
Confidence 4679999999999999996 9999999999999999 4789999998754 57899998764
No 423
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=97.97 E-value=8.7e-06 Score=71.57 Aligned_cols=56 Identities=11% Similarity=0.142 Sum_probs=49.9
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeec--CCHHHHHHHHHhCCCCeEEEEEeC
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPV--KNLKSLANMVENCDDEFLKFDLEY 578 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v--~~~~~l~~~l~~~~~~~~~l~~~r 578 (612)
.+++|.+|.++++|..+| ++.||+|++|||++| .+++++.++++... +.++|++.+
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~ 108 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVK-GEVTIHYNK 108 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEEEC
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEe
Confidence 469999999999999999 999999999999999 99999999999765 457777744
No 424
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.97 E-value=9.7e-06 Score=71.73 Aligned_cols=60 Identities=12% Similarity=0.081 Sum_probs=53.4
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|.+ +.++..+++.. ++.++|++.|+++
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 108 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRNA-GYAVSLRVQHRLQ 108 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHHH-CSEEEEEEEEEEE
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 4679999999999999999 99999999999999998 45888888865 6789999988876
No 425
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.97 E-value=2.8e-06 Score=73.86 Aligned_cols=60 Identities=12% Similarity=0.111 Sum_probs=46.0
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
..|++|..|.++|||++ | |++||+|++|||+++.++..-. +..++... .++.+.|+|.|.
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~~-~~~~v~l~v~R~ 104 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAE--------AVEILKAV-PPGLVHLGICSG 104 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHH--------HHHHHHHS-CSEEEEEEEECC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhC-CCCeEEEEEEcC
Confidence 45899999999999999 9 9999999999999997743110 22444332 456899999884
No 426
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.96 E-value=4e-06 Score=71.77 Aligned_cols=59 Identities=10% Similarity=0.050 Sum_probs=51.7
Q ss_pred CceEEEeeecccccccc-cccccceeEeeCCeecCCH-HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGY-EEIVNTQVLAFNGNPVKNL-KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~-g~~~gd~I~~vng~~v~~~-~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|.+|.++++|..+ |+++||+|++|||++|.++ .++.++++.. ++.+.|++.|+++
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~~~~~~~~~~~~-~~~v~l~v~R~~~ 95 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGSRQEALILIKGS-FRILKLIVRRRNS 95 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSCSHHHHHHHHTC-CSSCEEEEEECCC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccchHHHHHHHHHhC-CCeEEEEEEeCCC
Confidence 45899999999999999 9999999999999999984 7788888864 5788999988864
No 427
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=97.96 E-value=8.2e-06 Score=78.42 Aligned_cols=63 Identities=6% Similarity=0.146 Sum_probs=57.1
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeEEEEe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQVVVLR 585 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~~~l~ 585 (612)
..+++|..|.++++|..+|+++||+|++|||++|.+ ++++.++++. ++.+.|++.|++..-..
T Consensus 109 ~~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~--~~~v~l~v~r~g~~p~~ 173 (192)
T 3k1r_A 109 GCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT--EKTVSIKVRHIGLIPVK 173 (192)
T ss_dssp TEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS--SSEEEEEEEECCEEEEC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC--CCeEEEEEEECCccCCC
Confidence 346999999999999999999999999999999999 9999999987 78999999999886443
No 428
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=97.96 E-value=6.3e-06 Score=72.05 Aligned_cols=60 Identities=12% Similarity=0.047 Sum_probs=53.5
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+| +++||+|++|||+++.+ +.++..+++.. ++.++|++.|++.
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~-g~~v~l~v~R~~~ 96 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRNT-KGRVRFMIGRERP 96 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHHS-CSSCEEEEEECCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CCeEEEEEEeCCC
Confidence 4679999999999999999 99999999999999985 78888888875 7889999988764
No 429
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=97.96 E-value=5.9e-06 Score=74.10 Aligned_cols=60 Identities=8% Similarity=0.041 Sum_probs=53.5
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhC------CCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENC------DDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~------~~~~~~l~~~r~~~ 581 (612)
.+++|..|.++++|..+| ++.||+|++|||+++.+ +.++.++|+.+ ++..++|++.|++.
T Consensus 55 ~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 469999999999999999 99999999999999987 77999999975 47899999988753
No 430
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=97.96 E-value=1.2e-05 Score=77.66 Aligned_cols=59 Identities=19% Similarity=0.146 Sum_probs=47.1
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
..|++|..|.++|||++ | |++||+|++|||++|.+|.... +..++. ..++.+.|+|.|.
T Consensus 135 ~~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~--------~~~~l~--~~~~~v~L~V~R~ 195 (206)
T 3r0h_A 135 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQV--------CYALFK--GANGKVSMEVTRP 195 (206)
T ss_dssp SSCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHH--------HHHHHH--TCCSEEEEEEEEE
T ss_pred CceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEeC
Confidence 35899999999999999 8 9999999999999999874311 223443 3567899999984
No 431
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=97.95 E-value=1e-05 Score=68.60 Aligned_cols=58 Identities=5% Similarity=0.001 Sum_probs=48.2
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|.+|.++++|..+| +++||+|++|||++|.+ ..+...+++. .++.++|++.|.
T Consensus 30 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 90 (96)
T 2qkv_A 30 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFKG-ANGKVSMEVTRP 90 (96)
T ss_dssp SSSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT-CSSEEEEEEECC
T ss_pred CCcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCcEEEEEEeC
Confidence 4579999999999999999 99999999999999986 4455555554 456799998875
No 432
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=97.95 E-value=1.3e-05 Score=83.41 Aligned_cols=62 Identities=8% Similarity=0.016 Sum_probs=56.4
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhC-CCCeEEEEEeC-CeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENC-DDEFLKFDLEY-DQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~-~~~~~~l~~~r-~~~~ 582 (612)
..+++|.+|.++++|..+|++.||+|++|||++|.++.+|..++... +++.++|++.| +++.
T Consensus 241 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~~g~~ 304 (324)
T 1y8t_A 241 TLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGS 304 (324)
T ss_dssp SSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEECSSCCE
T ss_pred CCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCCCE
Confidence 56799999999999999999999999999999999999999999874 67899999999 7643
No 433
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=97.95 E-value=1.1e-05 Score=68.34 Aligned_cols=54 Identities=11% Similarity=0.099 Sum_probs=47.1
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLE 577 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~ 577 (612)
..+++|.+|.++++|..+|++.||+|++|||++|. +++++.+++++ ..+++++.
T Consensus 34 ~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~---~~l~ltV~ 89 (94)
T 3kzd_A 34 IRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---PSLGLLVR 89 (94)
T ss_dssp SCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS---SEEEEEEE
T ss_pred cCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC---CeEEEEEE
Confidence 35799999999999999999999999999999999 57999999983 45666653
No 434
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=97.95 E-value=8.7e-06 Score=72.26 Aligned_cols=60 Identities=7% Similarity=0.075 Sum_probs=52.6
Q ss_pred CCceEEEeeecccccccc-cccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGY-EEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~-g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+ |++.||+|++|||++|.+ +.++..+++.. ++.++|++.|+++
T Consensus 52 ~~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~~-~~~v~l~v~r~g~ 114 (120)
T 2iwo_A 52 DVPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKNA-SGSIEMQVVAGGD 114 (120)
T ss_dssp EEEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHHC-CSEEEEEEECCTT
T ss_pred CCCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEECCc
Confidence 346999999999999988 999999999999999987 78889999876 4569999988764
No 435
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.95 E-value=1.1e-05 Score=70.23 Aligned_cols=60 Identities=10% Similarity=0.141 Sum_probs=53.1
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+| +++||+|++|||++|. ++.++..+++.. ++.+.|++.|+++
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~~ 97 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRHG-GKKMRFLVAKSDV 97 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHTC-CSEEEEEEECCCH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEEeCCc
Confidence 4679999999999999999 9999999999999997 588888888864 7889999988753
No 436
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=97.95 E-value=2.6e-05 Score=68.38 Aligned_cols=61 Identities=16% Similarity=0.174 Sum_probs=47.7
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
.|..|..|.+ ++.. ||++||+|++|||++|.+...-. +..++.....|+.+.|+|.|+|..
T Consensus 34 ~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~e--------vv~~lk~~~~G~~v~L~V~R~g~~ 95 (113)
T 3soe_A 34 TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQ--------VVEVLKQFPVGADVPLLILRGGPP 95 (113)
T ss_dssp TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHH--------HHHHHHHSCTTCEEEEEEEESSCC
T ss_pred CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHcCCCCCEEEEEEEECCcc
Confidence 3666888876 5667 99999999999999999764211 346677666799999999998853
No 437
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=97.94 E-value=7.3e-06 Score=70.58 Aligned_cols=55 Identities=13% Similarity=0.232 Sum_probs=49.4
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDL 576 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~ 576 (612)
..+++|..|.++++|..+|+++||+|++|||++|. +++++.++|+...+ .++|++
T Consensus 47 ~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~-~v~l~v 103 (104)
T 2z17_A 47 EMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSSGN-LLTIET 103 (104)
T ss_dssp SCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHTTT-EEEEEC
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCC-cEEEEE
Confidence 45799999999999999999999999999999999 99999999998754 776654
No 438
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.94 E-value=7.1e-06 Score=69.69 Aligned_cols=58 Identities=10% Similarity=0.085 Sum_probs=50.9
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|. +|+++||+|++|||++|.+ +.++..+++. .++.+.|++.|++
T Consensus 30 ~~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 89 (96)
T 2edv_A 30 SLPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILRE-AEDSLSITVVRCT 89 (96)
T ss_dssp SSSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHH-CSSCEEEEEEECC
T ss_pred CCCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 4568999999999996 9999999999999999976 7888888887 5788999998875
No 439
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.94 E-value=3.2e-06 Score=72.48 Aligned_cols=59 Identities=10% Similarity=0.132 Sum_probs=52.1
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
.+++|..|.++++|..+| ++.||+|++|||++|.+ +.++.++++ ..++.++|++.|++.
T Consensus 36 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~-~~g~~v~l~v~R~~~ 97 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIK-SGGRRVRLLLKRGTG 97 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHH-HHCSEECEEEECTTC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH-cCCCeEEEEEEECCC
Confidence 479999999999999999 99999999999999987 578888887 456889999988765
No 440
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.94 E-value=4.8e-06 Score=72.63 Aligned_cols=59 Identities=10% Similarity=-0.061 Sum_probs=53.6
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|. ++.++.++++. .++.+.|++.|+.
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~r~~ 104 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRS-VGDTLTVLVCDGF 104 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSS-CSSEEEECCCCCC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 4679999999999999999 9999999999999999 79999999986 5688999988875
No 441
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=97.94 E-value=8.8e-06 Score=70.34 Aligned_cols=58 Identities=10% Similarity=-0.022 Sum_probs=50.6
Q ss_pred CceEEEeeeccccccccc--ccccceeEeeCCeecCCH--HHHHHHHHhCCC---CeEEEEEeCC
Q 007213 522 SFPWFCKVLVADINIGYE--EIVNTQVLAFNGNPVKNL--KSLANMVENCDD---EFLKFDLEYD 579 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g--~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~---~~~~l~~~r~ 579 (612)
.+++|.+|.++++|..+| ++.||+|++|||++|.++ .++..+++...+ +.+.|++.|+
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 468999999999999999 999999999999999955 788888887653 5899998875
No 442
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=97.93 E-value=9.1e-06 Score=76.74 Aligned_cols=59 Identities=12% Similarity=0.223 Sum_probs=47.4
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
..|++|..|.++|||++ | |++||+|++|||+.|.++.... +..++.. .|+.+.|+|.|+
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~--------~~~~l~~--~g~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSF--------AASVLRN--TKGRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHH--------HHHHHHH--CCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCEEEEEEEeC
Confidence 35899999999999999 9 9999999999999997654311 2244443 678999999985
No 443
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=97.92 E-value=1.4e-05 Score=68.61 Aligned_cols=58 Identities=7% Similarity=-0.023 Sum_probs=51.0
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|.+ |+++||+|++|||++|.+ +.++..+++. .++.++|++.|+.
T Consensus 42 ~~gv~V~~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 42 DDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT-FQNTVELIIVREV 101 (103)
T ss_dssp CCSEECCCBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHHH-CCSEEEEEEECCC
T ss_pred CCCEEEEEECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhhc-CCCeEEEEEEecC
Confidence 56799999999999999 999999999999999987 7788888874 4688999998863
No 444
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=97.91 E-value=1.2e-05 Score=71.64 Aligned_cols=57 Identities=11% Similarity=0.140 Sum_probs=50.9
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeC
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEY 578 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r 578 (612)
..+++|..|.++++|..+| ++.||+|++|||++|. ++.++.+++++..+ .++|++.|
T Consensus 44 ~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~-~v~l~v~r 103 (125)
T 3hpk_A 44 CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEVKG-EVTIHYNK 103 (125)
T ss_dssp CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHSCS-EEEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCC-eEEEEEEE
Confidence 3568999999999999999 9999999999999998 79999999998665 48888865
No 445
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=97.91 E-value=9e-06 Score=72.48 Aligned_cols=58 Identities=14% Similarity=0.175 Sum_probs=45.3
Q ss_pred CCccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEE
Q 007213 352 QKGVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R 419 (612)
..+++|..|.++|||++ | |++||+|++|||+++.++.... +..++.. .++++.|+|.|
T Consensus 44 ~~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~r 103 (125)
T 3hpk_A 44 CPCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVE--------VAKMIQE--VKGEVTIHYNK 103 (125)
T ss_dssp CSSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHH--------HHHHHHH--SCSEEEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHc--CCCeEEEEEEE
Confidence 35789999999999999 9 9999999999999998543211 2244443 45679999988
No 446
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=97.91 E-value=9.9e-06 Score=67.18 Aligned_cols=57 Identities=18% Similarity=0.300 Sum_probs=43.7
Q ss_pred CccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEE
Q 007213 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R 419 (612)
.|++|..|.++|||++ ||++||+|++|||+++.++.... +..++. ..++++.|+|.+
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~--------~~~~~~--~~~~~v~l~v~~ 86 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKE--------AVTILS--QQRGEIEFEVVY 86 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHH--------HHHHHH--HCCSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHH--cCCCeEEEEEEE
Confidence 4789999999999986 99999999999999998764311 223343 356778888764
No 447
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.91 E-value=8.5e-06 Score=70.30 Aligned_cols=58 Identities=14% Similarity=0.254 Sum_probs=52.0
Q ss_pred ceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhC----CCCeEEEEEeCCe
Q 007213 523 FPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENC----DDEFLKFDLEYDQ 580 (612)
Q Consensus 523 ~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~----~~~~~~l~~~r~~ 580 (612)
.++|..|.++++|..+| +++||+|++|||+++.+ ++++.++|+++ .++.+.|.+.|.+
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFN 97 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEcc
Confidence 35899999999999999 99999999999999966 99999999986 6778999888764
No 448
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.90 E-value=5.6e-06 Score=90.04 Aligned_cols=61 Identities=16% Similarity=0.266 Sum_probs=51.9
Q ss_pred CCccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCC--CCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 352 QKGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIAND--GTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~--~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
..|++|..|.++|||++ ||++||+|++|||++|.+. .+ +..++.....|+.++|+|.|+|+
T Consensus 22 ~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e----------~~~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 22 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREE----------AVLFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp TTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHH----------HHHHHHHSCTTSEEEEEEEECHH
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH----------HHHHHHhcCCCCEEEEEEEECCc
Confidence 35899999999999999 9999999999999999884 33 33566666689999999999764
No 449
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=97.89 E-value=1.6e-05 Score=66.37 Aligned_cols=56 Identities=11% Similarity=0.153 Sum_probs=48.9
Q ss_pred CceEEEeeecccccccc-cccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeC
Q 007213 522 SFPWFCKVLVADINIGY-EEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEY 578 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~-g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r 578 (612)
.+++|.+|.++++|..+ |+++||+|++|||++|.+ +.++..+++.. ++.++|++.|
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~~-~~~v~l~v~r 88 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKT-GKEVVLEVKY 88 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHTC-CSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEE
Confidence 56899999999999999 999999999999999985 77888888865 5778888765
No 450
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=97.89 E-value=1.8e-05 Score=71.46 Aligned_cols=58 Identities=12% Similarity=0.154 Sum_probs=51.8
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
.+++|.+|.++++|..+|++.||+|++|||++|. +++++.++++. .++.+.|++.|..
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~-~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ-GGNTLMVKVVMVT 124 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHH-TTTEEEEEEECCC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEECC
Confidence 4799999999999999999999999999999998 58899999987 5678888887654
No 451
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.89 E-value=3.9e-06 Score=91.36 Aligned_cols=62 Identities=16% Similarity=0.128 Sum_probs=56.4
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHh-CCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVEN-CDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~-~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|..+|++.||+|++|||++|.++.+|..+|.. .+++.++|++.|+++.
T Consensus 285 ~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~ 347 (448)
T 1ky9_A 285 QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQ 347 (448)
T ss_dssp CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHHHHHHTTSSBTTCCCEEEEESSSCE
T ss_pred CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEE
Confidence 4679999999999999999999999999999999999999999986 4678899999998755
No 452
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.89 E-value=1.1e-05 Score=71.28 Aligned_cols=60 Identities=12% Similarity=0.010 Sum_probs=52.6
Q ss_pred CceEEEeeecccccccc--cccccceeEeeCCeecCC--HHHHHHHHHhCCC---CeEEEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGY--EEIVNTQVLAFNGNPVKN--LKSLANMVENCDD---EFLKFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~--g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~---~~~~l~~~r~~~ 581 (612)
.+++|.+|.++++|..+ |++.||+|++|||++|.+ +.++.++++...+ ..++|++.|+..
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcccc
Confidence 46899999999999999 999999999999999976 6888899887654 589999998854
No 453
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.89 E-value=3.1e-06 Score=83.04 Aligned_cols=66 Identities=26% Similarity=0.436 Sum_probs=53.2
Q ss_pred CccEEEEecCCCcccC-CCCCCCEEEEECCEEeC--CCCCCccccCccchHHHHhhccCCCCEE-EEEEEECCEEE--EE
Q 007213 353 KGVRIRRVDPTAPESE-VLKPSDIILSFDGIDIA--NDGTVPFRHGERIGFSYLVSQKYTGDSA-AVKVLRDSKIL--NF 426 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~--s~~~v~~~~~~~~~~~~~l~~~~~g~~v-~l~V~R~G~~~--~~ 426 (612)
.|++|..|.++|||++ ||++||+|++|||++|. ++.++ ..++... |+.+ .|+|.|+|+.. ++
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl----------~~~l~~~--g~~v~~l~V~R~g~~~~~~v 100 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDV----------VSAIRAG--GDETKLLVVDRETDEFFKKC 100 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHH----------HHHHHHH--CSEEEEEECCHHHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHH----------HHHHHhc--CCeEEEEEEEECCEEEEEEE
Confidence 4899999999999999 99999999999999999 66663 3555544 7888 99999988765 44
Q ss_pred EEEe
Q 007213 427 NITL 430 (612)
Q Consensus 427 ~v~l 430 (612)
.++.
T Consensus 101 ~v~p 104 (216)
T 2krg_A 101 RVIP 104 (216)
T ss_dssp TCCC
T ss_pred EEEE
Confidence 4443
No 454
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=97.88 E-value=1.6e-05 Score=68.10 Aligned_cols=58 Identities=14% Similarity=0.078 Sum_probs=50.1
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeec--CCHHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPV--KNLKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v--~~~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
.+++|..|.++++|..+| ++.||+|++|||++| .++.++..+++. .++.++|++.|+.
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~~ 95 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN-AGQTVTIIAQYKP 95 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT-SCSEEEEEEEECH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECc
Confidence 479999999999999999 999999999999999 456777777776 5678899887764
No 455
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.88 E-value=2.1e-05 Score=68.07 Aligned_cols=59 Identities=7% Similarity=0.056 Sum_probs=51.3
Q ss_pred CCceEEEeeecccccccc-cccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGY-EEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~-g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|..|.++++|..+ |++.||+|++|||++|.+ +.++.++++. .++.+.|++.|.+
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKT-AKEPIVVQVLRRT 101 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHH-CCSSEEEEEEECC
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCcEEEEEEeCC
Confidence 467999999999999999 999999999999999975 7788888886 4578888887754
No 456
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.88 E-value=1.5e-06 Score=76.87 Aligned_cols=59 Identities=14% Similarity=0.104 Sum_probs=45.7
Q ss_pred ccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccC--CCCEEEEEEEEC
Q 007213 354 GVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKY--TGDSAAVKVLRD 420 (612)
Q Consensus 354 G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~--~g~~v~l~V~R~ 420 (612)
.++|..|.++|||++ ||++||+|++|||+++.++..- .+..++.... .|+.++|+|.|.
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~--------~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLA--------EAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHH--------HHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH--------HHHHHHHHhhhcCCCeEEEEEEeC
Confidence 488999999999987 7999999999999999985410 0224444432 388999999984
No 457
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=97.88 E-value=1.4e-05 Score=69.97 Aligned_cols=58 Identities=14% Similarity=0.150 Sum_probs=50.7
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHH--HHHHHHhCCCCeEEEEEeCC-e
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKS--LANMVENCDDEFLKFDLEYD-Q 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~--l~~~l~~~~~~~~~l~~~r~-~ 580 (612)
..+++|..|.++++|..+|++.||+|++|||++|.++.+ +.++++.. +.+.|++.|+ +
T Consensus 40 ~~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~--~~v~l~v~r~~g 100 (114)
T 1x5n_A 40 KPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSS--RSLTISIVAAAG 100 (114)
T ss_dssp SCSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHHC--SSEEEEECSSTT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcC--CeEEEEEEcCCC
Confidence 457999999999999999999999999999999999855 78888764 5788998887 5
No 458
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.87 E-value=1e-05 Score=86.60 Aligned_cols=57 Identities=19% Similarity=0.208 Sum_probs=48.2
Q ss_pred ccEEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCEE
Q 007213 354 GVRIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSKI 423 (612)
Q Consensus 354 G~~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~~ 423 (612)
.++|..|.++|||++ |||+||+|++|||++|.+|. +. .++.. .|.+++|+|.|+|+.
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~----------~~l~~--~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ES----------ELLQG--STRQLQIGVYKEVVG 148 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GG----------GGTSC--SCEEEEEEEEEEEC-
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-HH----------HHhhC--CCCEEEEEEEeCCcc
Confidence 378899999999999 99999999999999999984 32 44544 889999999998764
No 459
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=97.87 E-value=8e-06 Score=85.90 Aligned_cols=61 Identities=11% Similarity=0.032 Sum_probs=56.1
Q ss_pred CceEEEeeecccccccccccc-----------cceeEeeCCeecCCHHHHHHHHHhC-CCCeEEEEEeCCeEE
Q 007213 522 SFPWFCKVLVADINIGYEEIV-----------NTQVLAFNGNPVKNLKSLANMVENC-DDEFLKFDLEYDQVV 582 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~-----------gd~I~~vng~~v~~~~~l~~~l~~~-~~~~~~l~~~r~~~~ 582 (612)
.+++|.+|.++++|.++|+++ ||+|++|||++|.++++|.++|... +++.++|++.|+++.
T Consensus 251 ~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~ 323 (348)
T 3qo6_A 251 SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHK 323 (348)
T ss_dssp SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECSSSE
T ss_pred ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEECCEE
Confidence 689999999999999999999 9999999999999999999999764 578999999998754
No 460
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.86 E-value=1.4e-05 Score=69.22 Aligned_cols=59 Identities=14% Similarity=0.076 Sum_probs=52.1
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|..|.++++|..+| ++.||+|++|||++|. ++.++..+++.. ++.+.|++.|++
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~R~~ 100 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRNT-KGNVRFVIGREK 100 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHHC-CSEEEEEEEEEC
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CCeEEEEEEeCC
Confidence 4679999999999999999 9999999999999998 478888888874 688999988764
No 461
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.86 E-value=9.9e-06 Score=71.31 Aligned_cols=56 Identities=9% Similarity=0.036 Sum_probs=49.2
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
.+++|..|.++++|..+|+++||+|++|||++|.+ |+++.++++. ..+.|++.|..
T Consensus 44 ~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~---~~v~l~v~R~p 101 (114)
T 2d8i_A 44 RRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ---PSLGLLVRTYP 101 (114)
T ss_dssp EEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS---SEEEEEEEECC
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC---CcEEEEEEECC
Confidence 46999999999999999999999999999999998 5799888874 47888887753
No 462
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.85 E-value=2.7e-05 Score=68.42 Aligned_cols=59 Identities=12% Similarity=0.077 Sum_probs=51.8
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|..+| ++.||+|++|||++|.+ +.++..+++. .++.++|++.|..
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~-~g~~v~l~v~r~~ 110 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKN-AGNPVVFIVQSLS 110 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHT-SCSSEEEEECCBS
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 4679999999999999999 99999999999999976 7788888886 4688899887653
No 463
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.84 E-value=1.5e-05 Score=65.96 Aligned_cols=54 Identities=11% Similarity=0.217 Sum_probs=42.9
Q ss_pred EEEEecCCCcccC-CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEE
Q 007213 356 RIRRVDPTAPESE-VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (612)
Q Consensus 356 ~V~~V~p~spA~~-GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R 419 (612)
.|..+.++|||++ ||+.||+|++|||+.+.....-. ...++. ..|.+++|+|..
T Consensus 26 ~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~e--------vv~llr--~~g~~V~L~v~p 80 (82)
T 1r6j_A 26 KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQ--------IADILS--TSGTVVTITIMP 80 (82)
T ss_dssp EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHH--------HHHHHH--HSCSEEEEEEEE
T ss_pred EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHH--------HHHHHh--cCCCEEEEEEEe
Confidence 3789999999999 99999999999999998765311 234444 478889998864
No 464
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.84 E-value=8.8e-06 Score=71.85 Aligned_cols=62 Identities=19% Similarity=0.262 Sum_probs=46.4
Q ss_pred CccEEEEecCCCcccC---CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccC--CCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE---VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKY--TGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~---GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~--~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.... .+..+.|+|.|+..
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~--------~~~~~~~~~~~~~~~v~l~v~R~~~ 107 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQ--------VVLFIKASCERHSGELMLLVRPNAV 107 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHH--------HHHHHHHHHHCCSSCEEEEEECCCC
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHH--------HHHHHHhccccCCCEEEEEEEcccc
Confidence 4799999999999987 89999999999999998863311 223333321 13579999999753
No 465
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.84 E-value=1.5e-05 Score=70.97 Aligned_cols=60 Identities=5% Similarity=0.008 Sum_probs=51.7
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+| +++||+|++|||++|.+ +.++..+++... ..+.|++.|+++
T Consensus 50 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~~~-~~v~l~v~R~~~ 112 (124)
T 2daz_A 50 RMSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKTAP-SKVKLVFIRNED 112 (124)
T ss_dssp SCCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHHSC-SEEEEEEEECTT
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEeCCC
Confidence 3579999999999999999 99999999999999965 788888888764 588998887753
No 466
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=97.84 E-value=1.4e-05 Score=69.22 Aligned_cols=58 Identities=5% Similarity=0.004 Sum_probs=48.0
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|.+|.++++|..+| +++||+|++|||++|.+ ..+...+++. .++.+.|++.|.
T Consensus 24 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~-~~~~v~l~v~R~ 84 (106)
T 2la8_A 24 EIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG-ANGKVSMEVTRP 84 (106)
T ss_dssp SSSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHHS-CBSCEEEEEEEC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC-CCCeEEEEEEeC
Confidence 4679999999999999999 99999999999999986 4455555554 456789988775
No 467
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=97.83 E-value=0.0018 Score=63.11 Aligned_cols=145 Identities=15% Similarity=0.196 Sum_probs=88.8
Q ss_pred CCEEEecccccCCC-CeEEEEEcCCCcEEEEE-----EEEeccCCCeEEEEeccccccCCeeeeEcC---CCCCCCCeEE
Q 007213 158 GRRVLTNAHSVEHY-TQVKLKKRGSDTKYLAT-----VLAIGTECDIAMLTVEDDEFWEGVLPVEFG---ELPALQDAVT 228 (612)
Q Consensus 158 ~g~ILT~aHvV~~~-~~i~V~~~~~g~~~~a~-----vv~~d~~~DLAlLkv~~~~~~~~l~pl~l~---~~~~~G~~V~ 228 (612)
..||+|++|..... ..++|+.. .|. |... -+..=...||.+||++.+ ++|.+-. ..+..++.|.
T Consensus 46 G~~iItn~HLf~~nnG~L~I~s~-hG~-f~v~nt~~lki~~i~g~DiiiIrmPkD-----fpPf~~~l~FR~P~~~e~V~ 118 (229)
T 1lvm_A 46 GPFIITNKHLFRRNNGTLLVQSL-HGV-FKVKNTTTLQQHLIDGRDMIIIRMPKD-----FPPFPQKLKFREPQREERIC 118 (229)
T ss_dssp TTEEEECGGGGGCCSSEEEEEET-TEE-EEESCGGGSEEEECTTSSCEEEECCTT-----SCCCCSCCCBCCCCTTCEEE
T ss_pred CCEEEeChhhhccCCCcEEEEeC-CCe-EEeCCCCceeeEEeCCccEEEEeCCCc-----CCCcccccccCCCCCCCeEE
Confidence 78999999999854 67888773 232 2210 123345789999999875 3443322 3677899999
Q ss_pred EEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecC-CCeEEEEEecccCCCccceeecccC
Q 007213 229 VVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFND-KGKCVGIAFQSLKHEDVENIGYVIP 307 (612)
Q Consensus 229 aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~-~G~VIGI~~~~~~~~~~~~~~~aIP 307 (612)
.+|.-+.....+ ..||.........+. .+-..=.....|+-|.|||+. ||.+|||.+.... ....+|+.|
T Consensus 119 lVg~~fq~k~~~---s~vSesS~i~p~~~~---~fWkHwIsT~~G~CGlPlVs~~Dg~IVGiHsl~~~---~~~~NyF~~ 189 (229)
T 1lvm_A 119 LVTTNFQTKSMS---SMVSDTSCTFPSSDG---IFWKHWIQTKDGQCGSPLVSTRDGFIVGIHSASNF---TNTNNYFTS 189 (229)
T ss_dssp EEEEECSSSSCE---EEECCCEECEEETTT---TEEEECBCCCTTCTTCEEEETTTCCEEEEEEEEET---TSCSEEEEE
T ss_pred EEEeEeecCCcc---EEECCcceeEecCCC---CEeEEEeeCCCCcCCCcEEECCCCcEEEEEccccc---CCCeEEEeC
Confidence 999876543312 223332211111111 122333456679999999988 8999999998542 223455544
Q ss_pred --hhhHHHHHHHHH
Q 007213 308 --TPVIMHFIQDYE 319 (612)
Q Consensus 308 --i~~i~~~l~~l~ 319 (612)
-+.+ .+|+...
T Consensus 190 f~~~f~-~~L~~~~ 202 (229)
T 1lvm_A 190 VPKNFM-ELLTNQE 202 (229)
T ss_dssp CCTTHH-HHHHCGG
T ss_pred CCHHHH-HHHhccc
Confidence 4445 7776654
No 468
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.83 E-value=1.5e-05 Score=68.80 Aligned_cols=59 Identities=10% Similarity=0.179 Sum_probs=50.9
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCe
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
..+++|.+|.++++|..+|++.||+|++|||++|.+ +.++..+++.. ++.+.|++.|.+
T Consensus 31 ~~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~r~~ 91 (106)
T 2eei_A 31 KKGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKKS-GSRVMFLLVDKE 91 (106)
T ss_dssp CCSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHHH-CSEEEEEECCTT
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCeEEEEEEcCc
Confidence 457999999999999999999999999999999984 68888888764 578888887654
No 469
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.82 E-value=1.8e-05 Score=76.13 Aligned_cols=61 Identities=15% Similarity=0.273 Sum_probs=55.3
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeecC--CHHHHHHHHHhCC-CCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVK--NLKSLANMVENCD-DEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~--~~~~l~~~l~~~~-~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+| ++.||+|++|||++|. +|.++.++|+..+ +..++|++.|++.
T Consensus 35 ~~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 35 SSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVA 99 (196)
T ss_dssp SCSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEECSC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecCC
Confidence 3568999999999999999 9999999999999999 7899999999876 7789999988763
No 470
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.80 E-value=2.3e-05 Score=73.28 Aligned_cols=59 Identities=15% Similarity=0.028 Sum_probs=51.4
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHH-HH-HHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKS-LA-NMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~-l~-~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|.+|.++++|..+|++.||+|++|||++|.++.+ +. .+++...++.++|++.|+
T Consensus 26 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~ 86 (166)
T 1w9e_A 26 DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDR 86 (166)
T ss_dssp TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcC
Confidence 367999999999999999999999999999999999998 55 555566777999999666
No 471
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=97.79 E-value=2.7e-05 Score=64.47 Aligned_cols=55 Identities=13% Similarity=0.097 Sum_probs=47.5
Q ss_pred CceEEEeeeccccccc-ccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEe
Q 007213 522 SFPWFCKVLVADINIG-YEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLE 577 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~-~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~ 577 (612)
.+++|.+|.++++|.. +|++.||+|++|||+++. ++.++..++++. ++.++|++.
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~-~~~v~l~v~ 85 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQ-RGEIEFEVV 85 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHHC-CSEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCeEEEEEE
Confidence 4589999999999999 799999999999999994 669999999864 567777764
No 472
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=97.79 E-value=2.1e-05 Score=67.65 Aligned_cols=60 Identities=18% Similarity=0.288 Sum_probs=45.6
Q ss_pred CccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ ||++||+|++|||+++.+..... +..++.. .+++++|+|.|...
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~--------~~~~l~~--~~~~v~l~v~~~~~ 96 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKE--------AVTILSQ--QRGEIEFEVVYVAL 96 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHH--------HHHHHHH--CCSEEEEEEEECC-
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh--CCCcEEEEEEecCC
Confidence 4889999999999987 99999999999999998753211 2233333 45689999998654
No 473
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.78 E-value=2.9e-05 Score=68.59 Aligned_cols=57 Identities=11% Similarity=0.145 Sum_probs=51.2
Q ss_pred ceEEEeeecccccccc-cccccceeEeeCCeecCC--HHHHHHHHHhC---CCCeEEEEEeCC
Q 007213 523 FPWFCKVLVADINIGY-EEIVNTQVLAFNGNPVKN--LKSLANMVENC---DDEFLKFDLEYD 579 (612)
Q Consensus 523 ~v~v~~v~~~~~~~~~-g~~~gd~I~~vng~~v~~--~~~l~~~l~~~---~~~~~~l~~~r~ 579 (612)
.++|.+|.++++|..+ |+++||+|++|||+++.+ ++++.++|+.. .+..++|++.|.
T Consensus 44 ~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 44 KVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp SEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred CEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 4899999999999999 999999999999999997 88999999865 377899999885
No 474
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.78 E-value=1.1e-05 Score=72.59 Aligned_cols=61 Identities=18% Similarity=0.280 Sum_probs=46.6
Q ss_pred CCccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECC
Q 007213 352 QKGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDS 421 (612)
Q Consensus 352 ~~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G 421 (612)
..+++|..|.+++||++ ||++||+|++|||+.+.++..-. +..++.. ..+..+.|+|.|++
T Consensus 56 ~~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~--------~~~~l~~-~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 56 DKPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFE--------AWNIIKA-LPDGPVTIVIRRKS 118 (130)
T ss_dssp CCCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHH--------HHHHHHT-SCSSEEEEEEEEES
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHH--------HHHHHHh-CCCceEEEEEEeCC
Confidence 35799999999999987 89999999999999999863210 2234433 34567999999865
No 475
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=97.78 E-value=2.9e-05 Score=73.23 Aligned_cols=58 Identities=12% Similarity=0.054 Sum_probs=52.5
Q ss_pred CCceEEEeeeccccccccc-ccccceeEeeCCeec--CCHHHHHHHHHhCCCCeEEEEEeCC
Q 007213 521 FSFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPV--KNLKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v--~~~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
..+++|.+|.++++|..+| +++||+|++|||++| .++.++.++|+. .+..++|++.|+
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~-~g~~v~L~V~R~ 170 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN-TKGRVRFMIGRE 170 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH-CCSEEEEEEEEC
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCEEEEEEEeC
Confidence 4679999999999999999 999999999999999 678999999997 567899998875
No 476
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=97.76 E-value=3e-05 Score=66.62 Aligned_cols=57 Identities=14% Similarity=0.151 Sum_probs=49.6
Q ss_pred CceEEEeeecccccccc-cccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCC
Q 007213 522 SFPWFCKVLVADINIGY-EEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYD 579 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~-g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~ 579 (612)
.+++|.+|.++++|..+ |++.||+|++|||++|.+ ++++.++++... +.++|++.|.
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~-~~v~l~v~~~ 94 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQR-GEIEFEVVYV 94 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHHCC-SEEEEEEEEC
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC-CcEEEEEEec
Confidence 46899999999999994 999999999999999954 999999999765 5788887654
No 477
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.76 E-value=2.4e-05 Score=68.84 Aligned_cols=60 Identities=13% Similarity=0.062 Sum_probs=51.9
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|. +|+++||+|++|||++|.+ +.++..+++. .++.+.|++.|.+..
T Consensus 45 ~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~-~~~~v~l~v~R~~~~ 106 (117)
T 2csj_A 45 ETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRK-SGKIAAIVVKRPRKV 106 (117)
T ss_dssp CCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHH-SCSEEEEEEEEEEEC
T ss_pred CCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhc-CCCeEEEEEEECCcc
Confidence 4579999999999996 9999999999999999987 4778888887 478999999887654
No 478
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.74 E-value=7.2e-06 Score=70.74 Aligned_cols=59 Identities=15% Similarity=0.202 Sum_probs=46.2
Q ss_pred ccEEEEecCCCcccC-C-CCCCCEEEEECCEEeCC--CCCCccccCccchHHHHhhc---cCCCCEEEEEEEECCE
Q 007213 354 GVRIRRVDPTAPESE-V-LKPSDIILSFDGIDIAN--DGTVPFRHGERIGFSYLVSQ---KYTGDSAAVKVLRDSK 422 (612)
Q Consensus 354 G~~V~~V~p~spA~~-G-L~~GDiIlaInG~~V~s--~~~v~~~~~~~~~~~~~l~~---~~~g~~v~l~V~R~G~ 422 (612)
+++|..|.+++||++ | |++||+|++|||+++.+ |.++ ..++.. ...++.+.++|.|.++
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~----------~~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREA----------ARIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHH----------HHHHHHHHHCSSCSEEEEEECCCCC
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHH----------HHHHHHhcccCCCCeEEEEEEEccc
Confidence 458999999999999 9 99999999999999976 4442 244443 2257889999988653
No 479
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=97.71 E-value=6.7e-05 Score=65.81 Aligned_cols=57 Identities=5% Similarity=-0.133 Sum_probs=48.2
Q ss_pred ceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCC-CCeEEEEEeCCeE
Q 007213 523 FPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCD-DEFLKFDLEYDQV 581 (612)
Q Consensus 523 ~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~-~~~~~l~~~r~~~ 581 (612)
+.+|.+|++ ++..+|+++||+|++|||++|.+ +++++++|++++ +..++|.+.|++.
T Consensus 35 g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~ 94 (113)
T 3soe_A 35 GQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGP 94 (113)
T ss_dssp EEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSC
T ss_pred CcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCc
Confidence 455778876 46779999999999999999994 579999999876 6799999999864
No 480
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.69 E-value=9.5e-05 Score=62.64 Aligned_cols=58 Identities=14% Similarity=0.101 Sum_probs=49.8
Q ss_pred ccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEE
Q 007213 354 GVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLR 419 (612)
Q Consensus 354 G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R 419 (612)
.++|.+|.++++|++ .|+.||.|++|||+.+..|...+ ...++.....|.+++|++.+
T Consensus 29 ~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~e--------vv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 29 YAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYD--------VAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp CCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHH--------HHHHHHHSCTTCEEEEEEEE
T ss_pred cEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHH--------HHHHHHhCCCCCEEEEEEEC
Confidence 478999999999998 59999999999999999986532 55788888888999998876
No 481
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.67 E-value=2.5e-05 Score=67.97 Aligned_cols=58 Identities=12% Similarity=0.092 Sum_probs=51.0
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCe
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~ 580 (612)
.+++|..|.++++|..+| ++.||+|++|||++|.++ .++..+++. .++.+.|.+.|+.
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~~ 99 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALKR-AGQSVTIVAQYRP 99 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHHS-CCSEEEEEEECCH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCcEEEEEEECc
Confidence 578999999999999999 999999999999999987 777777774 5678899888765
No 482
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=97.66 E-value=4.4e-05 Score=67.26 Aligned_cols=58 Identities=16% Similarity=0.098 Sum_probs=48.2
Q ss_pred CceEEEeeeccccccccc-ccccceeEeeCCeecCCHHHH--HHHHHhCCCCeEEEEEeCCe
Q 007213 522 SFPWFCKVLVADINIGYE-EIVNTQVLAFNGNPVKNLKSL--ANMVENCDDEFLKFDLEYDQ 580 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g-~~~gd~I~~vng~~v~~~~~l--~~~l~~~~~~~~~l~~~r~~ 580 (612)
.+++|..|.++++|..+| +++||+|++|||++|.++.++ ...++. .++.+.|.+.|++
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~-~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN-AGQTVTIIAQYKP 98 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHT-SCSEEEEEEEECH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc-CCCeEEEEEEECC
Confidence 579999999999999999 999999999999999998543 344443 5678899887764
No 483
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.65 E-value=1.5e-05 Score=78.16 Aligned_cols=59 Identities=5% Similarity=-0.019 Sum_probs=53.6
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeE-EEEEeCCeE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFL-KFDLEYDQV 581 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~-~l~~~r~~~ 581 (612)
.+++|..|.++++|..+|++.||+|++|||++|. +++++.++|+.. ++.+ .|.+.|+++
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~-g~~v~~l~V~R~g~ 94 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLVVDRETD 94 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH-CSEEEEEECCHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc-CCeEEEEEEEECCE
Confidence 4799999999999999999999999999999999 999999999977 7778 888877763
No 484
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.64 E-value=6.2e-05 Score=62.16 Aligned_cols=52 Identities=8% Similarity=0.147 Sum_probs=45.9
Q ss_pred EEEeeecccccccccccccceeEeeCCeecC--CHHHHHHHHHhCCCCeEEEEEe
Q 007213 525 WFCKVLVADINIGYEEIVNTQVLAFNGNPVK--NLKSLANMVENCDDEFLKFDLE 577 (612)
Q Consensus 525 ~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~--~~~~l~~~l~~~~~~~~~l~~~ 577 (612)
.|+++.++++|.++|++.||+|++|||+.|. +.+++.++|+ ..+..++|++.
T Consensus 26 ~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr-~~g~~V~L~v~ 79 (82)
T 1r6j_A 26 KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILS-TSGTVVTITIM 79 (82)
T ss_dssp EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHH-HSCSEEEEEEE
T ss_pred EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHh-cCCCEEEEEEE
Confidence 3789999999999999999999999999995 6789999999 56778888864
No 485
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=96.81 E-value=7.1e-06 Score=71.93 Aligned_cols=37 Identities=22% Similarity=0.459 Sum_probs=32.9
Q ss_pred CccEEEEecCCCcccC--CCCCCCEEEEECCEEeCC--CCC
Q 007213 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIAN--DGT 389 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s--~~~ 389 (612)
.|++|..|.++|||++ ||++||+|++|||++|.+ +.+
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~ 93 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKE 93 (112)
Confidence 4799999999999997 899999999999999954 554
No 486
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.62 E-value=4.8e-05 Score=81.19 Aligned_cols=62 Identities=13% Similarity=-0.053 Sum_probs=56.4
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHh-CCCCeEEEEEeCCeEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVEN-CDDEFLKFDLEYDQVV 582 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~-~~~~~~~l~~~r~~~~ 582 (612)
..+++|.+|.++++|..+|+++||+|++|||++|.+ ++++..+|+. .+++.++|++.|+++.
T Consensus 30 ~~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~~ 94 (391)
T 3tsz_A 30 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDV 94 (391)
T ss_dssp TTEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCCcc
Confidence 468999999999999999999999999999999976 9999999997 5788999999887643
No 487
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=97.59 E-value=0.00012 Score=69.94 Aligned_cols=56 Identities=7% Similarity=-0.009 Sum_probs=49.0
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhCCCCeEEEEEeC
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENCDDEFLKFDLEY 578 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~~~~~~~l~~~r 578 (612)
..+++|++|.++++|.+ |++.||+|++|||++|.+ ..+...+++... +.+.|.+.|
T Consensus 23 ~~g~~V~~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~~~-~~v~l~v~r 80 (195)
T 2qbw_A 23 DDGIFVTRVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKTFQ-NTVELIIVR 80 (195)
T ss_dssp CCSEEEEEECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHHCC-SEEEEEEEE
T ss_pred CCCEEEEEECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHcCC-CeEEEEEEE
Confidence 56899999999999999 999999999999999987 557777777654 589999988
No 488
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.58 E-value=0.00014 Score=86.81 Aligned_cols=67 Identities=15% Similarity=0.203 Sum_probs=55.0
Q ss_pred CCccEEEEecCC--------CcccC-C--CCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEEC
Q 007213 352 QKGVRIRRVDPT--------APESE-V--LKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRD 420 (612)
Q Consensus 352 ~~G~~V~~V~p~--------spA~~-G--L~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~ 420 (612)
..+++|..|.++ |||++ | |+ ||+|++|||+++.++.++ ..++.. ..|+++.|+|.|+
T Consensus 747 ~~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~----------~~~~~~-~~g~~v~l~v~r~ 814 (1045)
T 1k32_A 747 GDHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNI----------YRVLSE-KAGTSARIRLSGK 814 (1045)
T ss_dssp TTEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCH----------HHHHHT-TTTSEEEEEEECS
T ss_pred CCEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhH----------HHhhcC-CCCCEEEEEEECC
Confidence 357899999987 99999 9 99 999999999999998764 255544 6899999999998
Q ss_pred C-EEEEEEEEe
Q 007213 421 S-KILNFNITL 430 (612)
Q Consensus 421 G-~~~~~~v~l 430 (612)
| +.++++++.
T Consensus 815 ~~~~~~~~~~~ 825 (1045)
T 1k32_A 815 GGDKRDLMIDI 825 (1045)
T ss_dssp SSCEEEEEEEC
T ss_pred CCceEEEEEEE
Confidence 7 555666663
No 489
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=97.55 E-value=1.1e-05 Score=84.13 Aligned_cols=61 Identities=11% Similarity=0.168 Sum_probs=0.0
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHhCCCCeEEEEEeCCeEEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVENCDDEFLKFDLEYDQVVV 583 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~~~~~~~~l~~~r~~~~~ 583 (612)
..+++|.+|.++++|..+|+++||+|++|||++|.++++|.++++. ++.++|++.|+++..
T Consensus 253 ~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~--~~~v~l~v~R~g~~~ 313 (332)
T 3num_A 253 ISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVIKR--ESTLNMVVRRGNEDI 313 (332)
T ss_dssp ---------------------------------------------------------------
T ss_pred CCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHHHHHhC--CCeEEEEEEECCEEE
Confidence 4679999999999999999999999999999999999999999985 678999999988653
No 490
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=96.69 E-value=1.2e-05 Score=70.59 Aligned_cols=54 Identities=13% Similarity=0.094 Sum_probs=46.5
Q ss_pred CceEEEeeeccccccc-ccccccceeEeeCCeec--CCHHHHHHHHHhCCCCeEEEEE
Q 007213 522 SFPWFCKVLVADINIG-YEEIVNTQVLAFNGNPV--KNLKSLANMVENCDDEFLKFDL 576 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~-~g~~~gd~I~~vng~~v--~~~~~l~~~l~~~~~~~~~l~~ 576 (612)
.+++|.+|.++++|.. +|+++||+|++|||++| .++.++.++++... +.++|++
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~~~-~~v~l~V 109 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQQR-GEIEFEV 109 (112)
Confidence 4689999999999999 99999999999999999 56899999998654 3466665
No 491
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.52 E-value=0.0067 Score=57.48 Aligned_cols=146 Identities=14% Similarity=0.155 Sum_probs=91.2
Q ss_pred EEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEEEE--EEecc---CCCeEEEEeccccccCCeeeeEcCCCCCCC
Q 007213 150 SSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLATV--LAIGT---ECDIAMLTVEDDEFWEGVLPVEFGELPALQ 224 (612)
Q Consensus 150 ~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a~v--v~~d~---~~DLAlLkv~~~~~~~~l~pl~l~~~~~~G 224 (612)
.-||+-|.+.+.|-+.|...+ +. |.+ +|+.++..- .-.|. ..||++++++..+-+.++... |.+.....
T Consensus 28 ~ft~LgI~dr~~vvP~Ha~~~-~~--i~i--~g~~~~v~d~~~L~~~~g~~~Elt~v~l~~~~kfRDIrkf-i~~~~~~~ 101 (187)
T 3qzr_A 28 HFTMLGVRDRLAVLPRHSQPG-KT--IWI--EHKLVNVLDAVELVDEQGVNLALTLITLDTNEKFRDITKF-IPENISTA 101 (187)
T ss_dssp EEEEEEEEBTEEEEEGGGCCC-SE--EEE--TTEEEEEEEEEECCCTTCCCCSEEEEEECSSCCBCCCGGG-SCSSCCCE
T ss_pred eEEEEEEeeeEEEEeCCCCCC-CE--EEE--CCEEEEeeeeEEEECCCCCEEEEEEEEcCCCccccchHHh-CccCcCCC
Confidence 358888999999999999443 33 444 677665411 11122 469999999865422333331 22222222
Q ss_pred CeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeec
Q 007213 225 DAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGY 304 (612)
Q Consensus 225 ~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~ 304 (612)
..+..+-+........+..|.+...... ...+......+..+++...|.-||+|+. .|+++||++++ ....||
T Consensus 102 ~~~~L~~ns~~~~~~~~~vG~v~~~g~i-nlsg~~t~r~l~Y~~pTk~G~CGgvl~~-~gkIiGIHvaG-----nG~~G~ 174 (187)
T 3qzr_A 102 SDATLVINTEHMPSMFVPVGDVVQYGFL-NLSGKPTHRTMMYNFPTKAGQCGGVVTS-VGKIIGIHIGG-----NGRQGF 174 (187)
T ss_dssp EEEEEEECCSSSCSEEEEEEEEEEEEEE-EETTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEEEE-----CSSCEE
T ss_pred CceEEEEEcCCCcceEEEeccEEEeceE-eCCCCccccEEEECCCCCCCccCCeEEe-cCcEEEEEECC-----CCCcEE
Confidence 3455555554443434555666665433 2233444567889999999999999996 79999999993 344566
Q ss_pred ccCh
Q 007213 305 VIPT 308 (612)
Q Consensus 305 aIPi 308 (612)
+.++
T Consensus 175 ~a~L 178 (187)
T 3qzr_A 175 CAGL 178 (187)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 5554
No 492
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=97.51 E-value=0.0035 Score=59.30 Aligned_cols=144 Identities=17% Similarity=0.207 Sum_probs=87.9
Q ss_pred EEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEE---E-EEEEec-cCCCeEEEEeccccccCCeeeeEcCCCCCCCC
Q 007213 151 SSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYL---A-TVLAIG-TECDIAMLTVEDDEFWEGVLPVEFGELPALQD 225 (612)
Q Consensus 151 GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~---a-~vv~~d-~~~DLAlLkv~~~~~~~~l~pl~l~~~~~~G~ 225 (612)
-||.-|.+.+.|..+|..... .+.+ +|..+. + .++..+ -..||++|+++..+-+.++... +.+....-+
T Consensus 25 ~t~LgI~d~~~vvP~Ha~~~~---~i~i--~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~~kfRDIrkf-i~~~~~~~~ 98 (182)
T 2b0f_A 25 FTGLGIHDRVCVIPTHAQPGD---DVLV--NGQKIRVKDKYKLVDPENINLELTVLTLDRNEKFRDIRGF-ISEDLEGVD 98 (182)
T ss_dssp EEEEEEEBTEEEEESTTCCCS---EEEE--TTEEEEEEEEEEEEETTTEEEEEEEEEECCSSCBCCGGGT-BCSSCCCSE
T ss_pred EEEEEEeeeEEEEecCCCCcc---EEEE--CCEEEEeeeeeEEEcCCCCeeEEEEEECCCcccccchHHh-cCCCCCCCc
Confidence 478889999999999997653 3444 555432 2 222211 2579999999765433344331 222211113
Q ss_pred eEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeecc
Q 007213 226 AVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGYV 305 (612)
Q Consensus 226 ~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~a 305 (612)
.+.++ +-.+.....+..|.+....... ..+......+..+++...|.-||||+. +|+++||+++ +....||+
T Consensus 99 ~~lv~-n~~~~p~~~~~vg~~~~~g~i~-l~G~~t~~~~~Y~~pTk~G~CGgvl~~-~gkIlGIHva-----G~G~~Gfa 170 (182)
T 2b0f_A 99 ATLVV-HSNNFTNTILEVGPVTMAGLIN-LSSTPTNRMIRYDYATKTGQCGGVLCA-TGKIFGIHVG-----GNGRQGFS 170 (182)
T ss_dssp EEEEE-ESSSCEEEEEEEEEEEEEEEEE-ETTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEE-----EETTEEEE
T ss_pred eEEEE-EcCCCceEEEEecceEEeceEc-CCCcEecceEEeccCCCCcccCCeEEe-CCCEEEEEeC-----CCCCceEe
Confidence 34444 4333333234566655543322 234445567888999999999999996 7999999999 44556776
Q ss_pred cCh
Q 007213 306 IPT 308 (612)
Q Consensus 306 IPi 308 (612)
.++
T Consensus 171 a~l 173 (182)
T 2b0f_A 171 AQL 173 (182)
T ss_dssp EEC
T ss_pred hhh
Confidence 554
No 493
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.49 E-value=6.9e-05 Score=84.25 Aligned_cols=61 Identities=7% Similarity=-0.017 Sum_probs=54.8
Q ss_pred CceEEEeeecccccccccccccceeEeeCCeecCCHHHHHHHHHh-CCCCeEEEEEeCCeEEE
Q 007213 522 SFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKSLANMVEN-CDDEFLKFDLEYDQVVV 583 (612)
Q Consensus 522 ~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~l~~~l~~-~~~~~~~l~~~r~~~~~ 583 (612)
.+++|..|.++++|.++|+++||+|++|||++| +.++|.++|+. .+++.++|++.|+++..
T Consensus 496 ~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 557 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAFRRDELM 557 (597)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEEETTEEE
T ss_pred CeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEEECCEEE
Confidence 468999999999999999999999999999999 68999999987 46789999999987643
No 494
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.46 E-value=0.0002 Score=79.19 Aligned_cols=62 Identities=5% Similarity=-0.077 Sum_probs=52.1
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCHHH----------HHHHHHh-CCCCeEEEEEeCCeEEE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNLKS----------LANMVEN-CDDEFLKFDLEYDQVVV 583 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~~~----------l~~~l~~-~~~~~~~l~~~r~~~~~ 583 (612)
..|++|.+|.++++|.++ ++.||+|++|||++|.+..+ |..+|.. .+++.++|++.|+|+..
T Consensus 276 ~~Gv~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~ 348 (539)
T 4fln_A 276 NEGVLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHK 348 (539)
T ss_dssp SBCEEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEE
T ss_pred cCceeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEE
Confidence 578999999999999876 99999999999999976443 6677766 46789999999987653
No 495
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.44 E-value=0.00012 Score=79.71 Aligned_cols=61 Identities=11% Similarity=-0.063 Sum_probs=55.6
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCC--HHHHHHHHHhC-CCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKN--LKSLANMVENC-DDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~--~~~l~~~l~~~-~~~~~~l~~~r~~~ 581 (612)
..+++|.+|.++++|..+|++.||+|++|||++|.+ ++++..+|+.. .++.++|++.|+++
T Consensus 22 ~~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 22 DVGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp TTEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred cCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 467999999999999999999999999999999988 99999999984 67899999988764
No 496
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.43 E-value=0.0068 Score=57.36 Aligned_cols=146 Identities=13% Similarity=0.152 Sum_probs=91.0
Q ss_pred EEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEEE-E-EEEecc---CCCeEEEEeccccccCCeeeeEcCCCCCCC
Q 007213 150 SSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYLA-T-VLAIGT---ECDIAMLTVEDDEFWEGVLPVEFGELPALQ 224 (612)
Q Consensus 150 ~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~a-~-vv~~d~---~~DLAlLkv~~~~~~~~l~pl~l~~~~~~G 224 (612)
.-||+-|-+...|-+.|.-. .+. |.+ +|+.++. . ..-.|. ..||++|+++..+-+.++.. -+.+.....
T Consensus 26 ~ft~LgI~dr~~vvPtHa~~-~~~--i~i--~G~~~~v~d~~~L~~~~g~~lElt~v~l~~~~kFRDIrk-fi~~~~~~~ 99 (191)
T 3q3y_A 26 EFTMLGIYDRWAVLPRHAKP-GPT--ILM--NDQEVGVLDAKELVDKDGTNLELTLLKLNRNEKFRDIRG-FLAREEVEV 99 (191)
T ss_dssp EEEEEEEEBTEEEEEGGGCC-CSE--EEE--TTEEEEEEEEEEEECTTCCEEEEEEEEEECSSCBCCCGG-GBCSSCCCE
T ss_pred cEEEEEEeceEEEEECCCCC-CCE--EEE--CCEEEEeeeEEEEEcCCCCEEEEEEEECCCCccccchHH-hcccccccC
Confidence 35888898999999999943 333 455 6777763 1 112233 35999999987542233333 123333333
Q ss_pred CeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCCccceeec
Q 007213 225 DAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENIGY 304 (612)
Q Consensus 225 ~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~~~ 304 (612)
...+.+.+........+..|.+...... ...+......+..+++...|.-||+|+. .|+++||.++ +....||
T Consensus 100 ~~~~Lv~ns~~~p~~~~~vG~v~~~g~i-nlsg~~t~r~l~Y~~pTk~G~CGgvL~~-~gkIiGIHvg-----GnG~~Gf 172 (191)
T 3q3y_A 100 NEAVLAINTSKFPNMYIPVGQVTDYGFL-NLGGTPTKRMLVYNFPTRAGQCGGVLMS-TGKVLGIHVG-----GNGHQGF 172 (191)
T ss_dssp EEEEEEECSSSSTTEEEEEEEEEEEEEE-EETTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEE-----EETTEEE
T ss_pred CceEEEEEcCCCcceEEEeccEEEcceE-eCCCCcccCEEEecCCCCCCccCCEEEe-CCCEEEEEEC-----CCCcceE
Confidence 3444444544444434556766665332 2234444567899999999999999996 6999999998 4444566
Q ss_pred ccCh
Q 007213 305 VIPT 308 (612)
Q Consensus 305 aIPi 308 (612)
+.++
T Consensus 173 aa~L 176 (191)
T 3q3y_A 173 SAAL 176 (191)
T ss_dssp EEEC
T ss_pred Eeeh
Confidence 5544
No 497
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.42 E-value=5e-05 Score=76.52 Aligned_cols=60 Identities=18% Similarity=0.195 Sum_probs=48.1
Q ss_pred CccEEEEecCCCcccC--CCCCCCEEEEECCEEeCCCCCCccccCccchHHHHhhccCCCCEEEEEEEECCE
Q 007213 353 KGVRIRRVDPTAPESE--VLKPSDIILSFDGIDIANDGTVPFRHGERIGFSYLVSQKYTGDSAAVKVLRDSK 422 (612)
Q Consensus 353 ~G~~V~~V~p~spA~~--GL~~GDiIlaInG~~V~s~~~v~~~~~~~~~~~~~l~~~~~g~~v~l~V~R~G~ 422 (612)
.|++|..|.++|||++ ||++||+|++|||++|.++.... +..++.. .|+.+.|+|.|.++
T Consensus 103 ~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e--------~v~~l~~--~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDE--------AVQALKK--TGKEVVLEVKYMKE 164 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHH--------HHHHHHH--CCSCCCEEEECCSS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHH--------HHHHHhc--CCCeEEEEEEeCcc
Confidence 5899999999999997 89999999999999999864321 2234433 47889999999764
No 498
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.40 E-value=0.00013 Score=77.83 Aligned_cols=61 Identities=8% Similarity=0.016 Sum_probs=55.7
Q ss_pred CCceEEEeeecccccccccccccceeEeeCCeecCCH--HHHHHHHHhCCCCeEEEEEeCCeE
Q 007213 521 FSFPWFCKVLVADINIGYEEIVNTQVLAFNGNPVKNL--KSLANMVENCDDEFLKFDLEYDQV 581 (612)
Q Consensus 521 ~~~v~v~~v~~~~~~~~~g~~~gd~I~~vng~~v~~~--~~l~~~l~~~~~~~~~l~~~r~~~ 581 (612)
..+++|..|.++++|..+|+++||+|++|||++|.++ +++.++|+..++..++|++.|++.
T Consensus 98 ~~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~g~~v~l~v~r~g~ 160 (388)
T 1fc6_A 98 GKDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQGEADSQVEVVLHAPGA 160 (388)
T ss_dssp SSCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCBSTTCEEEEEEEETTE
T ss_pred CCcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 4679999999999999999999999999999999996 899999987778899999998865
No 499
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.40 E-value=0.0051 Score=58.65 Aligned_cols=144 Identities=16% Similarity=0.213 Sum_probs=86.1
Q ss_pred EEEEEEEeCCEEEecccccCCCCeEEEEEcCCCcEEE---EEEEEecc---CCCeEEEEeccccccCCeeeeEcCCC-CC
Q 007213 150 SSSGFAIGGRRVLTNAHSVEHYTQVKLKKRGSDTKYL---ATVLAIGT---ECDIAMLTVEDDEFWEGVLPVEFGEL-PA 222 (612)
Q Consensus 150 ~GSGfiI~~g~ILT~aHvV~~~~~i~V~~~~~g~~~~---a~vv~~d~---~~DLAlLkv~~~~~~~~l~pl~l~~~-~~ 222 (612)
.-||..|.+.++|.++|...+. ++.+ +|..+. ...+ .|. ..||++++++..+-+.++... |.+. ..
T Consensus 24 ~ft~LgI~dr~~lvP~Ha~~~~---ti~i--~g~~~~v~d~~~l-~~~~~~~~Dlt~v~l~~~~kFRDIr~~-~~~~~~~ 96 (190)
T 3zve_A 24 EFTMLGVHDRVAVIPTHASVGE---TIYI--NDVETKVLDACAL-RDLTDTNLEITIVKLDRNQKFRDIRHF-LPRYEDD 96 (190)
T ss_dssp EEEEEEEEBTEEEEEGGGCCCS---EEEE--TTEEEEEEEEEEE-ECTTCCEEEEEEEEECCSSCBCCCGGG-SCSSCCC
T ss_pred EEEEEEEeCCEEEEecCCCCCc---EEEE--CCEEEEeeEEEEE-EcCCCCeEEEEEEEcCCCcccCchHHh-ccccCCC
Confidence 4678889999999999976532 3444 454433 2221 232 359999999875422333321 3322 22
Q ss_pred CCCeEEEEEeCCCCCceeEEEEEEeceeeecccCCceeeeEEEEccCCCCCCCCCeEecCCCeEEEEEecccCCCcccee
Q 007213 223 LQDAVTVVGYPIGGDTISVTSGVVSRIEILSYVHGSTELLGLQIDAAINSGNSGGPAFNDKGKCVGIAFQSLKHEDVENI 302 (612)
Q Consensus 223 ~G~~V~aiG~p~g~~~~sv~~GiIs~~~~~~~~~~~~~~~~i~~da~i~~G~SGGPlvn~~G~VIGI~~~~~~~~~~~~~ 302 (612)
.++.+.++-.+.. ....+..|.+....... ..+......+..+++...|.-||||+. +|+++||..++ ....
T Consensus 97 ~~~~~l~i~s~~~-~~~~~~v~~v~~~~~i~-l~g~~~~~~~~Y~~pT~~G~CG~~li~-~gkI~GiHvaG-----~G~~ 168 (190)
T 3zve_A 97 YNDAVLSVHTSKF-PNMYIPVGQVTNYGFLN-LGGTPTHRILMYNFPTRAGQCGGVVTT-TGKVIGIHVGG-----NGAQ 168 (190)
T ss_dssp EEEEEEEECSSSC-SSEEEEEEEEEEEEEEE-ETTEEEEEEEEESSCCCTTCTTCEEEE-TTEEEEEEEEE-----CSSC
T ss_pred CCCeEEEEECCCC-cceEEecccceEeceee-cCCCeeeeeEEEecCCCCCccCCeEEE-CCCEEEEEECc-----CCCc
Confidence 2344444433322 33244455555544322 233444567888999999999999995 69999999984 3345
Q ss_pred ecccCh
Q 007213 303 GYVIPT 308 (612)
Q Consensus 303 ~~aIPi 308 (612)
||+-++
T Consensus 169 g~~~~l 174 (190)
T 3zve_A 169 GFAAML 174 (190)
T ss_dssp EEEEEC
T ss_pred eEehhh
Confidence 665544
No 500
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=97.31 E-value=0.00048 Score=55.99 Aligned_cols=43 Identities=26% Similarity=0.242 Sum_probs=31.0
Q ss_pred CCCCCCcccccC--CcceEEEEEEEeCCEEEecccccCCCCeEEEEE
Q 007213 134 EPNFSLPWQRKR--QYSSSSSGFAIGGRRVLTNAHSVEHYTQVKLKK 178 (612)
Q Consensus 134 ~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvV~~~~~i~V~~ 178 (612)
.....+||+... .....|.|.+|++.||||+|||+.+.. .|.+
T Consensus 7 a~~~~~Pw~v~l~~~~~~~CgGslIs~~~VLTAAHC~~~~~--~v~~ 51 (80)
T 2pka_A 7 CEKNSHPWQVAIYHYSSFQCGGVLVNPKWVLTAAHCKNDNY--EVWL 51 (80)
T ss_dssp CCTTSCTTEEEEEETTEEEEEEEEEETTEEEECGGGCCSCC--EEEE
T ss_pred CCCCCCCcEEEEEECCceEEEEEEEcCCEEEECHHHCCCCc--EEEE
Confidence 344567777543 234689999999999999999997643 4444
Done!