BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007214
(612 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SAJ3|FTSHC_ARATH ATP-dependent zinc metalloprotease FTSH 12, chloroplastic
OS=Arabidopsis thaliana GN=FTSH12 PE=2 SV=2
Length = 1008
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/600 (87%), Positives = 568/600 (94%)
Query: 1 MKEVEKSLRKDMVEKVTETQGTRALWIAKRWWRYRPKLPYTYFLEKLDSSEVAAVVFTED 60
MKEVEKSLR+D++ + +ET+GTRALWI+KRWWRYRPKLPYTYFL+KLDSSEVAAVVFTED
Sbjct: 323 MKEVEKSLREDVIGRTSETEGTRALWISKRWWRYRPKLPYTYFLQKLDSSEVAAVVFTED 382
Query: 61 LKRLYVTMKEGFPLEYVVDIPLDPYLFETIASSGAEVDLLQKRQIHYFLKVLIALLPGIL 120
LKRLYVTMKEGFPLEY+VDIPLDPYLFETI ++G EVDLLQKRQIHYF+KV IALLPGIL
Sbjct: 383 LKRLYVTMKEGFPLEYIVDIPLDPYLFETICNAGVEVDLLQKRQIHYFMKVFIALLPGIL 442
Query: 121 ILSLIRETVMLLHITSSRLLYKKYNQLFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVW 180
IL IRE+ MLL ITS R LYKKYNQLFDMAYAENFILPVG VS+TKSMYKEVVLGGDVW
Sbjct: 443 ILWFIRESAMLLLITSKRFLYKKYNQLFDMAYAENFILPVGDVSETKSMYKEVVLGGDVW 502
Query: 181 DLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEF 240
DLLDELMIYMGNPMQYYE+ V FVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEF
Sbjct: 503 DLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEF 562
Query: 241 TDSEKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDK 300
TDSEKSGAA+INEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDG+K
Sbjct: 563 TDSEKSGAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEK 622
Query: 301 ERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAG 360
E+TGIDRFSLRQAVIFICATNRPDELDLEFVR GRIDRRLYIGLPDAKQRVQIF VHSAG
Sbjct: 623 EKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLPDAKQRVQIFGVHSAG 682
Query: 361 KQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGM 420
K LAED++F +LVFRTVGFSGADIRNLVNE+ IMSVRKG S I QQDIVDVLDKQLLEGM
Sbjct: 683 KNLAEDIDFGKLVFRTVGFSGADIRNLVNEAAIMSVRKGRSYIYQQDIVDVLDKQLLEGM 742
Query: 421 GVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISV 480
GVLLTEEEQQKCEQSVS+EKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETA+SV
Sbjct: 743 GVLLTEEEQQKCEQSVSYEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAVSV 802
Query: 481 FYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVI 540
FYPRED +DQGYTTFGY+KMQMVVAHGGRCAER+VFGD+VTDGGKDDLEKITKIAREMVI
Sbjct: 803 FYPREDMVDQGYTTFGYMKMQMVVAHGGRCAERVVFGDNVTDGGKDDLEKITKIAREMVI 862
Query: 541 SPQNARLGLAGLTRRVGLLDRPDSSDGDLIKYRWDDPQVIPTDMTLELSELFTRELTRVI 600
SPQ+ARLGL L +++G++D PD+ DG+LIKYRWD P V+P +M++E+SELFTRELTR I
Sbjct: 863 SPQSARLGLTQLVKKIGMVDLPDNPDGELIKYRWDHPHVMPAEMSVEVSELFTRELTRYI 922
>sp|Q39444|FTSH_CAPAN ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment)
OS=Capsicum annuum GN=FTSH PE=2 SV=1
Length = 662
Score = 277 bits (708), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 179/526 (34%), Positives = 279/526 (53%), Gaps = 62/526 (11%)
Query: 32 WRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIA 91
WRY + FL + +V V F++D L +T +G +V P DP L + +A
Sbjct: 104 WRY------SEFLNAVKKGKVERVRFSKDGSALQLTAVDGRRANVIV--PNDPDLIDILA 155
Query: 92 SSGAEVDLLQKRQIHYFLKVLIALL-PGILILSLIRETVMLLHITSSRLLYKKYNQLFDM 150
+G ++ + + + V+ LL P I L L+++
Sbjct: 156 MNGVDISVSEGEGGNGLFSVIGNLLFPFIAFAGLF-------------FLFRRSQGGPGG 202
Query: 151 AYAENFILPVGYVSDTKSMYKEV---------VLGGDVWDL-LDELMIYMGNPMQYYERG 200
+ G +KS ++EV V G D L L E++ ++ NP +Y G
Sbjct: 203 PGGLGGPMDFGR---SKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALG 259
Query: 201 VQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIAR 259
+ +G LL GPPGTGKTL AR +A E+G+PF + +EF + GA+R+ +F A+
Sbjct: 260 AKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAK 319
Query: 260 RNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAV 314
AP VF+DEIDA+ AG D R + T L+ ++DG FS V
Sbjct: 320 SKAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TINQLLTEMDG---------FSGNSGV 369
Query: 315 IFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVF 374
I + ATNRPD LD +RPG+ DR++ + PD RV+I VHS GK LA+DV+F+++
Sbjct: 370 IVLAATNRPDVLDSALLRPGKFDRQVTVDRPDVAGRVRILQVHSRGKALAKDVDFDKIAR 429
Query: 375 RTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQ 434
RT GF+GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G +K
Sbjct: 430 RTPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER-IIAG---------PEKKNA 479
Query: 435 SVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTT 494
VS EKK+L+A HEAGH ++ L P +D A ++P G+ ++ F P E+ ++ G +
Sbjct: 480 VVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYS 539
Query: 495 FGYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMV 539
YL+ QM VA GGR AE ++FG D+VT G +D +++++AR+MV
Sbjct: 540 RSYLENQMAVALGGRVAEEVIFGEDNVTTGASNDFMQVSRVARQMV 585
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 276 bits (706), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 182/558 (32%), Positives = 302/558 (54%), Gaps = 57/558 (10%)
Query: 30 RWWRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFET 89
R + R L Y+ F+ +++++++ V + D + V G P Y+V++P DP L
Sbjct: 31 RPTQTRETLSYSDFVNRVEANQIERVNLSADRTQAQVPNPSGGP-PYLVNLPNDPDLINI 89
Query: 90 IASSGAEVDLLQKRQIHYFLKVLIAL-LPGILILSLIRETVMLLHITSSRLLYKKYNQLF 148
+ ++ + + ++ ++ L LP +L++ + L+++ Q
Sbjct: 90 LTQHNVDIAVQPQSDEGFWFRIASTLFLPILLLVGIF-------------FLFRRA-QSG 135
Query: 149 DMAYAENFILPVGYVSDTKSMYKEV-VLGGDVWDL------LDELMIYMGNPMQYYERGV 201
+ A NF G M + V GDV + L E++ ++ N ++ E G
Sbjct: 136 PGSQAMNF----GKSKARVQMEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTELGA 191
Query: 202 QFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARR 260
+ +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF + GA+R+ ++F A+
Sbjct: 192 KIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKA 251
Query: 261 NAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVI 315
NAP VF+DEIDA+ AG D R + T L+ ++DG + TGI I
Sbjct: 252 NAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TLNQLLTEMDGFEGNTGI---------I 301
Query: 316 FICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFR 375
+ ATNRPD LD +RPGR DR++ + PD R +I +VH+ GK L++DV+ +++ R
Sbjct: 302 IVAATNRPDVLDSALMRPGRFDRQVVVDRPDYAGRREILNVHARGKTLSQDVDLDKIARR 361
Query: 376 TVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQS 435
T GF+GAD+ NL+NE+ I++ R+ ++I ++ D +D+ VL E++ +
Sbjct: 362 TPGFTGADLSNLLNEAAILAARRNLTEISMDEVNDAIDR-------VLAGPEKKNRV--- 411
Query: 436 VSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTF 495
+S ++K L+A HEAGH ++ L P +D ++P G+ ++ F P ED ++ G +
Sbjct: 412 MSEKRKTLVAYHEAGHALVGALMPDYDPVQKISIIPRGRAGGLTWFTPSEDRMESGLYSR 471
Query: 496 GYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMVIS-PQNARLGLAGLT 553
YL+ QM VA GGR AE ++FG ++VT G +DL+++ ++AR+MV + RLG L
Sbjct: 472 SYLQNQMAVALGGRIAEEIIFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALG 531
Query: 554 RRVG--LLDRPDSSDGDL 569
R+ G L R +SD D
Sbjct: 532 RQGGGVFLGRDIASDRDF 549
>sp|O82150|FTSH_TOBAC ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana
tabacum GN=FTSH PE=2 SV=2
Length = 714
Score = 276 bits (705), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 181/539 (33%), Positives = 282/539 (52%), Gaps = 62/539 (11%)
Query: 25 LWIAKRWWRYRPKLP------YTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVV 78
L K + P+LP Y+ FL + +V V F++D L +T +G V
Sbjct: 108 LNAPKPQAQTNPELPEVSQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDG--RRATV 165
Query: 79 DIPLDPYLFETIASSGAEVDLLQKRQIHYFLKVLIA-LLPGILILSLIRETVMLLHITSS 137
+P DP L + +A +G ++ + + L LI L P I L
Sbjct: 166 TVPNDPDLIDILAMNGVDISVSEGDSAGNGLFNLIGNLFPFIAFAGLF------------ 213
Query: 138 RLLYKKYNQLFDMAYAENFILPVGYVSDTKSMYKEV---------VLGGDVWDL-LDELM 187
L+++ + G +KS ++EV V G D L L E++
Sbjct: 214 -YLFQRSQGGPGGPGGLGGPMDFGR---SKSKFQEVPETGVTFADVAGADQAKLELQEVV 269
Query: 188 IYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKS 246
++ NP +Y G + +G LL GPPGTGKTL AR +A E+G+PF + +EF +
Sbjct: 270 DFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGV 329
Query: 247 GAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKE 301
GA+R+ ++F A+ AP VF+DEIDA+ AG D R + T L+ ++DG
Sbjct: 330 GASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGNDEREQ-TINQLLTEMDG--- 385
Query: 302 RTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGK 361
FS VI + ATNRPD LD +RPGR DR++ + PD R++I VHS GK
Sbjct: 386 ------FSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRIKILQVHSRGK 439
Query: 362 QLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMG 421
L +DV+FE++ RT G++GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G
Sbjct: 440 ALTKDVDFEKIARRTPGYTGADLQNLMNEAAILAARRELKEISKDEISDALER-IIAG-- 496
Query: 422 VLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVF 481
+K VS EKK+L+A HEAGH ++ L P +D A ++P G+ ++ F
Sbjct: 497 -------PEKKNAVVSDEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFF 549
Query: 482 YPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMV 539
P E+ ++ G + YL+ QM VA G R AE ++FG D+VT G +D +++++AR+MV
Sbjct: 550 APSEERLESGLYSRSYLENQMAVALGERVAEEVIFGQDNVTTGASNDFMQVSRVARQMV 608
>sp|Q9BAE0|FTSH_MEDSA ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Medicago
sativa GN=FTSH PE=2 SV=1
Length = 706
Score = 274 bits (700), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/524 (33%), Positives = 276/524 (52%), Gaps = 59/524 (11%)
Query: 32 WRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIA 91
WRY + FL + +V V F++D L +T +G +V P DP L + +A
Sbjct: 127 WRY------SEFLNAVKKGKVERVRFSKDGSVLQLTAVDGRRANVIV--PNDPDLIDILA 178
Query: 92 SSGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMA 151
+G ++ + + Q + + +LL + L L++++
Sbjct: 179 MNGVDISVSEGEQGNGLFSFVGSLL------------LPFLAFAGLFLIFRRGQGGPGGP 226
Query: 152 YAENFILPVGYVSDTKSMYKEV---------VLGGDVWDL-LDELMIYMGNPMQYYERGV 201
+ G +KS ++EV V G D L L E++ ++ NP +Y G
Sbjct: 227 GGLGGPMDFGR---SKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGA 283
Query: 202 QFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMFSIARR 260
+ +G LL GPPGTGKTL AR +A E+G PF + +EF + GA+R+ ++F A+
Sbjct: 284 KIPKGCLLVGPPGTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKS 343
Query: 261 NAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVI 315
AP VF+DEIDA+ AG D R + T L+ ++DG FS VI
Sbjct: 344 KAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TINQLLTEMDG---------FSGNSGVI 393
Query: 316 FICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFR 375
+ ATNRPD LD +RPGR DR++ + PD RV+I VHS GK LA+DV+F+++ R
Sbjct: 394 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARR 453
Query: 376 TVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQS 435
T GF+G D++NL+NE+ I++ R+ +I + +I D L++ ++ G +K
Sbjct: 454 TPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALER-IIAG---------PEKKNAV 503
Query: 436 VSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTF 495
VS EKK+L+A HEAGH ++ L P +D A ++P G+ ++ F P E+ ++ G +
Sbjct: 504 VSEEKKKLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 563
Query: 496 GYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMV 539
YL+ QM VA GGR AE + D+VT G +D +++++AR+MV
Sbjct: 564 SYLENQMAVALGGRVAEEVFGQDNVTTGASNDFMQVSRVARQMV 607
>sp|Q9FH02|FTSH5_ARATH ATP-dependent zinc metalloprotease FTSH 5, chloroplastic
OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1
Length = 704
Score = 273 bits (697), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/525 (33%), Positives = 275/525 (52%), Gaps = 60/525 (11%)
Query: 32 WRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIA 91
WRY + FL + +V V F++D L +T + V +P DP L + +A
Sbjct: 124 WRY------SEFLNAVKKGKVERVKFSKDGSVLQLTAVDN--RRATVIVPNDPDLIDILA 175
Query: 92 SSGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMA 151
+G ++ + + + + LL +L L Y
Sbjct: 176 MNGVDISVSEGEGGNGLFDFIGNLLFPLLAFG--------------GLFYLFRGGQGGAG 221
Query: 152 YAENFILPVGYVSDTKSMYKEV---------VLGGDVWDL-LDELMIYMGNPMQYYERGV 201
P+ + +KS ++EV V G D L L E++ ++ NP +Y G
Sbjct: 222 GPGGLGGPMDF-GRSKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGA 280
Query: 202 QFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARR 260
+ +G LL GPPGTGKTL AR +A E+G+PF + +EF + GA+R+ ++F A+
Sbjct: 281 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKS 340
Query: 261 NAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVI 315
AP VF+DEIDA+ AG D R + T L+ ++DG FS VI
Sbjct: 341 KAPCIVFIDEIDAVGRQRGAGMGGGNDEREQ-TINQLLTEMDG---------FSGNSGVI 390
Query: 316 FICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFR 375
+ ATNRPD LD +RPGR DR++ + PD RVQI VHS GK + +DV++E++ R
Sbjct: 391 VLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVQILKVHSRGKAIGKDVDYEKVARR 450
Query: 376 TVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQS 435
T GF+GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G +K
Sbjct: 451 TPGFTGADLQNLMNEAAILAARRELKEISKDEISDALER-IIAG---------PEKKNAV 500
Query: 436 VSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTF 495
VS EKKRL+A HEAGH ++ L P +D A ++P G+ ++ F P E+ ++ G +
Sbjct: 501 VSEEKKRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 560
Query: 496 GYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIAREMV 539
YL+ QM VA GGR AE ++FGD +VT G +D +++++AR+MV
Sbjct: 561 SYLENQMAVALGGRVAEEVIFGDENVTTGASNDFMQVSRVARQMV 605
>sp|Q5Z974|FTSH1_ORYSJ ATP-dependent zinc metalloprotease FTSH 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH1 PE=2 SV=1
Length = 686
Score = 272 bits (695), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 179/525 (34%), Positives = 283/525 (53%), Gaps = 57/525 (10%)
Query: 32 WRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIA 91
WRY + FL + +V V F++D L +T +G V +P DP L + +A
Sbjct: 103 WRY------SEFLSAVKKGKVERVRFSKDGGLLQLTAIDG--RRATVVVPNDPDLIDILA 154
Query: 92 SSGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMA 151
++G ++ + + A PG + + L L+++ Q A
Sbjct: 155 TNGVDISVAEGD----------AAGPGGFLAFVGNLLFPFLAFAGLFFLFRRA-QGGPGA 203
Query: 152 YAENFILPVGYVSDTKSMYKEV---------VLGGDVWDL-LDELMIYMGNPMQYYERGV 201
P+ + +KS ++EV V G D L L E++ ++ NP +Y G
Sbjct: 204 GPGGLGGPMDF-GRSKSKFQEVPETGVTFVDVAGADQAKLELQEVVDFLKNPDKYTALGA 262
Query: 202 QFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMFSIARR 260
+ +G LL GPPGTGKTL AR +A E+G+PF + +EF + GA+R+ ++F A+
Sbjct: 263 KIPKGCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKA 322
Query: 261 NAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVI 315
AP VF+DEIDA+ AG D R + T L+ ++DG F+ VI
Sbjct: 323 KAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TINQLLTEMDG---------FAGNSGVI 372
Query: 316 FICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFR 375
+ ATNRPD LD +RPGR DR++ + PD RV+I +VHS GK LA+DV+FE++ R
Sbjct: 373 VLAATNRPDVLDAALLRPGRFDRQVTVDRPDVAGRVKILEVHSRGKALAKDVDFEKIARR 432
Query: 376 TVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQS 435
T GF+GAD++NL+NE+ I++ R+ +I + +I D L++ ++ G +K
Sbjct: 433 TPGFTGADLQNLMNEAAILAARRDLKEISKDEISDALER-IIAG---------PEKKNAV 482
Query: 436 VSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTF 495
VS EK+RL+A HEAGH ++ L P +D A ++P G+ ++ F P E+ ++ G +
Sbjct: 483 VSEEKRRLVAYHEAGHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSR 542
Query: 496 GYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMV 539
YL+ QM VA GGR AE ++FG ++VT G +D +++++AR+MV
Sbjct: 543 SYLENQMAVALGGRVAEEVIFGQENVTTGASNDFMQVSRVARQMV 587
>sp|Q39102|FTSH1_ARATH ATP-dependent zinc metalloprotease FTSH 1, chloroplastic
OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2
Length = 716
Score = 268 bits (685), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/391 (38%), Positives = 231/391 (59%), Gaps = 37/391 (9%)
Query: 166 TKSMYKEV---------VLGGDVWDL-LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGT 215
+KS ++EV V G D L L E++ ++ NP +Y G + +G LL GPPGT
Sbjct: 247 SKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGT 306
Query: 216 GKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMFSIARRNAPAFVFVDEIDAI 274
GKTL AR +A E+G+PF + +EF + GA+R+ ++F A+ AP VF+DEIDA+
Sbjct: 307 GKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV 366
Query: 275 -----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLE 329
AG D R + T L+ ++DG FS VI + ATNRPD LD
Sbjct: 367 GRQRGAGMGGGNDEREQ-TINQLLTEMDG---------FSGNSGVIVLAATNRPDVLDSA 416
Query: 330 FVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVN 389
+RPGR DR++ + PD RV+I VHS GK L +DV+F+++ RT GF+GAD++NL+N
Sbjct: 417 LLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALGKDVDFDKVARRTPGFTGADLQNLMN 476
Query: 390 ESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEA 449
E+ I++ R+ +I + +I D L++ ++ G +K VS EKKRL+A HEA
Sbjct: 477 EAAILAARRELKEISKDEISDALER-IIAG---------PEKKNAVVSEEKKRLVAYHEA 526
Query: 450 GHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGR 509
GH ++ L P +D A ++P G+ ++ F P E+ ++ G + YL+ QM VA GGR
Sbjct: 527 GHALVGALMPEYDPVAKISIIPRGQAGGLTFFAPSEERLESGLYSRSYLENQMAVALGGR 586
Query: 510 CAERLVFGD-DVTDGGKDDLEKITKIAREMV 539
AE ++FGD +VT G +D +++++AR+M+
Sbjct: 587 VAEEVIFGDENVTTGASNDFMQVSRVARQMI 617
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 258 bits (659), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/368 (39%), Positives = 218/368 (59%), Gaps = 29/368 (7%)
Query: 178 DVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASG 237
+V + L E++ ++ +P +Y E G + +GVLL GPPGTGKTL A+ +A E+G+PF SG
Sbjct: 164 EVKEELAEIVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFSISG 223
Query: 238 AEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEA 291
++F + GA+R+ ++F A++N+P VF+DEIDA+ AG D R + T
Sbjct: 224 SDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDAVGRQRGAGYGGGHDEREQ-TLNQ 282
Query: 292 LIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRV 351
L+ ++DG FS + +I I ATNRPD LD +RPGR DR++ I PD K R+
Sbjct: 283 LLVEMDG---------FSANEGIIIIAATNRPDVLDPALLRPGRFDRQIVIDRPDLKGRL 333
Query: 352 QIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDV 411
IF VH+ GK L DV+ E L RT GF+GADI NL+NE+ +++ R+ KI QD+ D
Sbjct: 334 AIFQVHAKGKPLEPDVDLEVLAKRTPGFTGADIANLMNEAALLAARRRKKKISMQDVEDA 393
Query: 412 LDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLP 471
+D+ L G +K + +S ++KR+ A HEAGH V+ H+ P D ++P
Sbjct: 394 IDRVLAGG---------PEKKSRVISEKEKRVTAYHEAGHAVVGHMLPHMDPLHKITIIP 444
Query: 472 GGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKI 531
G+ ++F P ED + + + +M +A GGR AE + FG ++T G +DD+E+
Sbjct: 445 RGRAMGYTLFLPVEDRYN---ISKSEILDRMTMALGGRAAEEITFG-EITSGAQDDIERT 500
Query: 532 TKIAREMV 539
T+ AR MV
Sbjct: 501 TQWARRMV 508
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 258 bits (658), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 227/381 (59%), Gaps = 30/381 (7%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L E++ ++ N ++ G + RGVLL GPPGTGKTL AR +A E+G+PF SG+EF +
Sbjct: 181 LAEVVDFLKNSERFTALGAKIPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSEFVE 240
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQL 296
GA+R+ ++F A++NAP VF+DEIDA+ AG D R + T L+ ++
Sbjct: 241 MFVGVGASRVRDLFEQAKQNAPCIVFIDEIDAVGRQRGAGLGGGNDEREQ-TLNQLLTEM 299
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG + +GI I I ATNRPD LD +RPGR DR++ + PD + R++I V
Sbjct: 300 DGFEGNSGI---------IVIAATNRPDVLDAALLRPGRFDRQVTVDRPDFQGRLEILKV 350
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ GK L+ DV+ E+L RT GF+GAD+ NL+NE+ I++ R+ ++I +I D +D+ +
Sbjct: 351 HARGKTLSADVDLEKLARRTPGFTGADLANLLNEAAILAARRNLTEISMDEINDAVDR-V 409
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
L G +K ++ +S +K L+A HEAGH ++ L P +D ++P G+
Sbjct: 410 LAG---------PEKKDRLMSERRKELVAYHEAGHALVGSLLPNYDPIQKVTIIPRGQAG 460
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIA 535
++ F P +D D G TT +LK M VA GGR AE +V+G+ ++T G DL+++ +IA
Sbjct: 461 GLTWFMPSDD--DMGLTTRAHLKNMMTVALGGRVAEEVVYGESEITTGAASDLQQVARIA 518
Query: 536 REMVIS-PQNARLGLAGLTRR 555
R MV + RLG L R+
Sbjct: 519 RNMVTRFGMSDRLGNVALGRQ 539
>sp|Q9WZ49|FTSH_THEMA ATP-dependent zinc metalloprotease FtsH OS=Thermotoga maritima
(strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
GN=ftsH PE=1 SV=1
Length = 610
Score = 251 bits (642), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 179/530 (33%), Positives = 280/530 (52%), Gaps = 52/530 (9%)
Query: 25 LWIAKRWW-RYRP--KLPYTYFLEKL-DSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDI 80
W+A+ ++ P KL YT F++ + D V + V D L V K+G Y VD
Sbjct: 20 FWLARFFYVENSPVSKLSYTSFVQMVEDERSVVSEVVIRDDGVLRVYTKDGRV--YEVDA 77
Query: 81 PL---DPYLFETIASSGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSS 137
P D L E + S G +V + +++ VL L+P IL + V+ L I S
Sbjct: 78 PWAVNDSQLIEKLVSKGIKVSGERSGSSSFWINVLGTLIPTILFI------VVWLFIMRS 131
Query: 138 RLLYKKYNQLFDMAYAENFIL-PVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQY 196
L + NQ F + + P G + + +K+V + + L E++ ++ +P ++
Sbjct: 132 --LSGRNNQAFTFTKSRATMYKPSG---NKRVTFKDVGGAEEAIEELKEVVEFLKDPSKF 186
Query: 197 YERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMF 255
G + +G+LL GPPGTGKTL AR +A E+ +PF SG++F + GAAR+ ++F
Sbjct: 187 NRIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLF 246
Query: 256 SIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSL 310
+ A+ +AP VF+DEIDA+ GRH R T L+ ++DG F
Sbjct: 247 AQAKAHAPCIVFIDEIDAV-GRHRGAGLGGGHDEREQTLNQLLVEMDG---------FDS 296
Query: 311 RQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFE 370
++ +I + ATNRPD LD +RPGR D+++ + PD R +I ++H+ K LAEDVN E
Sbjct: 297 KEGIIVMAATNRPDILDPALLRPGRFDKKIVVDPPDMLGRKKILEIHTRNKPLAEDVNLE 356
Query: 371 ELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQ 430
+ RT GF GAD+ NLVNE+ +++ R+G KI +D + +D+ V+ +
Sbjct: 357 IIAKRTPGFVGADLENLVNEAALLAAREGRDKITMKDFEEAIDR-------VIAGPARKS 409
Query: 431 KCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFD-WHAFSQLLPGGKETAISVFYPREDTID 489
K +S ++KR++A HEAGH V++ + P + H S + G K ++ P E D
Sbjct: 410 KL---ISPKEKRIIAYHEAGHAVVSTVVPNGEPVHRISIIPRGYKALGYTLHLPEE---D 463
Query: 490 QGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMV 539
+ + L ++ GGR AE +VFG DVT G +D+E+ T+IAR MV
Sbjct: 464 KYLVSRNELLDKLTALLGGRAAEEVVFG-DVTSGAANDIERATEIARNMV 512
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 249 bits (637), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 168/532 (31%), Positives = 269/532 (50%), Gaps = 53/532 (9%)
Query: 36 PKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPL---DPYLFETIAS 92
PK+ Y ++ + +++VA V + ++ VT+K+ P + L +P L + S
Sbjct: 82 PKMNYGQLIDAIKANQVAKVEVDTNRRQAIVTLKDAPPGSKPQTVQLLDNNPELLNLLRS 141
Query: 93 SGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLL-----HITSSRLLYKKYNQL 147
+DL R L LL +L+++++ V+++ + + + + K
Sbjct: 142 RSETIDLDINRTPDN--SALYGLLTNLLVVAILIGLVVMVVRRSANASGQAMSFGKSKAR 199
Query: 148 FDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGV 207
F M + T + +V + + L E++ ++ P ++ G + RGV
Sbjct: 200 FQME------------AKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAIGAKIPRGV 247
Query: 208 LLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFV 266
LL GPPGTGKTL A+ +A E+G+PF SG+EF + GA+R+ ++F A+ NAP V
Sbjct: 248 LLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLV 307
Query: 267 FVDEIDAIAGR-----HARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATN 321
F+DEIDA+ GR + + R T L+ ++DG + +GI I I ATN
Sbjct: 308 FIDEIDAV-GRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGI---------IVIAATN 357
Query: 322 RPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSG 381
RPD LDL +RPGR DR++ + PD + R I +H+ K+L E+V + RT GF+G
Sbjct: 358 RPDVLDLALLRPGRFDRQVTVDYPDVQGRELILAIHAQNKKLHEEVQLAAIARRTPGFTG 417
Query: 382 ADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKK 441
AD+ N++NE+ I + R+ I ++ D +D+ + G L V + K
Sbjct: 418 ADLANVLNEAAIFTARRRKEAITMAEVNDAIDRVVAGMEGTPL-----------VDSKSK 466
Query: 442 RLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQ 501
RL+A HE GH ++ L P D L+P G+ ++ F P E DQ T + +
Sbjct: 467 RLIAYHEVGHALIGTLCPGHDPVEKVTLIPRGQAQGLTWFTPDE---DQSLMTRNQMIAR 523
Query: 502 MVVAHGGRCAERLVFGDD-VTDGGKDDLEKITKIAREMVISPQNARLGLAGL 552
+ GGR AE ++FGDD VT G +D+EKIT +AR+MV + LGL L
Sbjct: 524 IAGLLGGRVAEEVIFGDDEVTTGAGNDIEKITYLARQMVTKLGMSSLGLVAL 575
>sp|Q67T82|FTSH2_SYMTH ATP-dependent zinc metalloprotease FtsH 2 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH2 PE=3 SV=1
Length = 587
Score = 248 bits (634), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 275/538 (51%), Gaps = 58/538 (10%)
Query: 35 RP-KLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPY-LFETIAS 92
RP +L Y+ FL+ L+ V V + + + + E F V +P D L E +
Sbjct: 34 RPTELSYSAFLDALEDRRVQEAVVRDRVLQGKMVGGESF----TVTLPPDAAGLAERLEE 89
Query: 93 SGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMAY 152
+G E R + + LLP TV+ L + + + Q
Sbjct: 90 AGVEQRYEVTRTPWW-----VTLLP----------TVLWLAVMVGLFAWAQKRQAGAFGL 134
Query: 153 AENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGP 212
A + + P+ ++ + +V +V L+E++ Y+ NP +Y G + +GVLL GP
Sbjct: 135 ARSTVKPLAP-GESPVTFADVAGMDEVKGELEEIVDYLKNPDKYRAIGARIPKGVLLYGP 193
Query: 213 PGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEI 271
PGTGKTL AR +A E+G+PF SG+ F + GA+R+ E+F+ AR+NAP VF+DEI
Sbjct: 194 PGTGKTLLARAVAGEAGVPFFALSGSSFVELFVGMGASRVRELFAQARKNAPCIVFIDEI 253
Query: 272 DAIAGRHARK-----DPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDEL 326
DA+ + R T L+ ++DG F + VI + ATNRPD L
Sbjct: 254 DAVGRQRGSAAVVGGHDEREQTLNQLLTEMDG---------FGAYEGVIVMAATNRPDVL 304
Query: 327 DLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRN 386
D +RPGR DR++ +G PDA R +I VH+ GKQL ++ + RT GF+GAD+ N
Sbjct: 305 DKALLRPGRFDRQIPVGPPDAAGREEILRVHAKGKQLDPSLDLAAVARRTPGFTGADLAN 364
Query: 387 LVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAV 446
L+NE+ I++VR+G S I +I + +D+ + G + + + E+KR +AV
Sbjct: 365 LLNEAAILAVRRGRSHITMSEIDEAIDRVVAGG---------PARKGRMIRPEEKRRVAV 415
Query: 447 HEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAH 506
HEAGH ++A L P D ++P G+ ++ P E DQ T L+ ++ +
Sbjct: 416 HEAGHALVATLTPGADPVQKVTIIPRGRAGGFTLTTPEE---DQMLYTRSELEARLKMLL 472
Query: 507 GGRCAERLVFGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDS 564
GG AE ++ G+ T G +DDL + T++AREM+ +R G+ + VGL+ PD+
Sbjct: 473 GGLAAEEVLLGERST-GAQDDLRRATQVAREMI-----SRYGMG---QSVGLMAVPDT 521
>sp|D1C8C0|FTSH4_SPHTD ATP-dependent zinc metalloprotease FtsH 4 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsh4 PE=3
SV=1
Length = 658
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 219/381 (57%), Gaps = 39/381 (10%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L E++ ++ NPM+Y+ G + RG+LL GPPGTGKTL AR +A E+G+PF S +EF +
Sbjct: 215 LSEVVDFLRNPMKYHAIGARLPRGILLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVE 274
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQL 296
GA+R+ ++F A+ +AP+ +FVDE+DA+ AG D R + T L+ ++
Sbjct: 275 MFVGVGASRVRDLFERAKASAPSIMFVDELDAVGRQRFAGLGGGNDEREQ-TLNQLLVEM 333
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F Q VI I ATNRPD LD +RPGR DR++ +GLPD + R I +
Sbjct: 334 DG---------FEPHQDVIVIAATNRPDVLDPALLRPGRFDRQVTVGLPDRRGREAILRI 384
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ G +A+D++ EEL T GFSGAD+ NLVNE+ +M+ RK +++ D + LDK
Sbjct: 385 HTRGIPVADDLDLEELAAATPGFSGADLANLVNEAALMAARKNKKIVERIDFDEALDKI- 443
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
VL TE E KR++A HEAGH V AH P D ++P G+
Sbjct: 444 -----VLGTERAMIMSEHD-----KRVVAYHEAGHAVAAHFSPGTDPLRKVSIVPRGQSL 493
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAR 536
+++ P ED + + YL ++ V GGR AE+LVF +++T G ++DL++ T +AR
Sbjct: 494 GVTIQAPEEDRFNY---SRAYLLARLTVMMGGRAAEKLVF-NEMTTGAQNDLKEATLLAR 549
Query: 537 EMVISPQNARLGLAGLTRRVG 557
MV GL G++ VG
Sbjct: 550 RMV--------GLWGMSDEVG 562
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 177/533 (33%), Positives = 271/533 (50%), Gaps = 60/533 (11%)
Query: 37 KLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKE---GFPLEYVVDIPLD-PYLFETIAS 92
++ Y FLE +D+ + +V E+ + V + + L VD+P + P L +
Sbjct: 42 RMTYGRFLEYVDAGRITSVDLYENGRTAIVQVSDPEVDRTLRSRVDLPTNAPELIARLRD 101
Query: 93 SGAEVDLLQKRQ---IHYFLKVLIALLPGILILSLI---RETVMLLHITSSRLLYKKYNQ 146
S +D R + F+ LI P +LI SL R + + + + K
Sbjct: 102 SNIRLDSHPVRNNGMVWGFVGNLI--FPVLLIASLFFLFRRSSNMPGGPGQAMNFGKSKA 159
Query: 147 LFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRG 206
F M + T M+ +V + + L E++ ++ P ++ G + +G
Sbjct: 160 RFQMD------------AKTGVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKG 207
Query: 207 VLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAF 265
VLL GPPGTGKTL A+ +A E+G+PF SG+EF + GA+R+ ++F A+ NAP
Sbjct: 208 VLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCL 267
Query: 266 VFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICAT 320
+F+DEIDA+ AG D R + T L+ ++DG + TGI I I AT
Sbjct: 268 IFIDEIDAVGRQRGAGIGGGNDEREQ-TLNQLLTEMDGFEGNTGI---------IIIAAT 317
Query: 321 NRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFS 380
NRPD LD +RPGR DR++ + PD R +I +VH+ K+LA +V+ + + RT GFS
Sbjct: 318 NRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFS 377
Query: 381 GADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEK 440
GAD+ NL+NE+ I++ R+ S I +I D +D+ + G L V +
Sbjct: 378 GADLANLLNEAAILTARRRKSAITLLEIDDAVDRVVAGMEGTPL-----------VDSKS 426
Query: 441 KRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKM 500
KRL+A HE GH ++ L D L+P G+ ++ F P E +QG TT L
Sbjct: 427 KRLIAYHEVGHAIVGTLLKDHDPVQKVTLIPRGQAQGLTWFTPNE---EQGLTTKAQLMA 483
Query: 501 QMVVAHGGRCAERLVFGDD-VTDGGKDDLEKITKIAREMVISPQNARLGLAGL 552
++ A GGR AE VFGDD VT G DL+++T++AR+MV R G++ L
Sbjct: 484 RIAGAMGGRAAEEEVFGDDEVTTGAGGDLQQVTEMARQMV-----TRFGMSNL 531
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 246 bits (627), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 268/543 (49%), Gaps = 69/543 (12%)
Query: 38 LPYTYFLEKLDSSEVAAVV-----FTEDLKRLYVTMKEGFPLE-YVVDIPL--DPYLFET 89
+PYT F ++L+++ VA V T + K+ P++ +V IP D L
Sbjct: 65 IPYTSFKQQLENNNVAEVTTQADKITGEFKQAVKVPGVDQPVKRFVTHIPAFGDDQLMSQ 124
Query: 90 IASSGAEVDLLQKRQIH-YFLKVLIALLPGILILSLIRETVMLLHITSSRLL------YK 142
+ G V++ + L +LI+ P IL L + + L K
Sbjct: 125 LDQKGVIVNVQPESSTRSLLLSILISFGPTILFFLLFLWLISKAQSSQQGLFGLGKSRAK 184
Query: 143 KYNQLFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQ 202
+YN T+ + +V + L E++ ++ NP +Y G
Sbjct: 185 RYN----------------ATESTRVTFDDVAGIEEAKQELAEIVDFLKNPQKYQRLGGT 228
Query: 203 FVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRN 261
+GVLL GPPGTGKTL AR +A E+G+PF SG+EF + GAAR+ E+F A++
Sbjct: 229 IPKGVLLIGPPGTGKTLLARAVAGEAGVPFFSMSGSEFVEMIVGVGAARVRELFQQAKKE 288
Query: 262 APAFVFVDEIDAIAGRHARK-----DPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIF 316
AP +FVDE+DAI R R T L+ ++DG F RQ VI
Sbjct: 289 APCIIFVDELDAIGRRRGSSINVGGHDEREQTLNQLLVEMDG---------FDSRQGVIV 339
Query: 317 ICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRT 376
+ ATNRPD LD +RPGR DRR+ + PD R++I VH+ L +++ E+ T
Sbjct: 340 LAATNRPDVLDPALLRPGRFDRRVVVQRPDKVGRLKILQVHTRNVPLDPNLDLSEIAAAT 399
Query: 377 VGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSV 436
G GAD+RNLVNE+ +++ R+G + + ++D D L+K L LL +
Sbjct: 400 PGLVGADLRNLVNEAALLAARRGKNYVDREDFFDALEKITLGAERKLL-----------I 448
Query: 437 SFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFG 496
S E +R +A HE+GH +L L P D ++P G+ ++ P +D + YT
Sbjct: 449 SEEDRRRVAYHESGHALLGLLLPEADPVHKVTIIPRGQALGVTYQTPEDDRYN--YTER- 505
Query: 497 YLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRV 556
YL+ ++ A GGR AE LVFG VT G ++DL+++T+IAR+MV G+++ V
Sbjct: 506 YLRSRITAALGGRAAEELVFG-TVTTGAENDLKQVTEIARQMVTR--------WGMSKEV 556
Query: 557 GLL 559
GL+
Sbjct: 557 GLV 559
>sp|A9BFL9|FTSH1_PETMO ATP-dependent zinc metalloprotease FtsH 1 OS=Petrotoga mobilis
(strain DSM 10674 / SJ95) GN=ftsH1 PE=3 SV=1
Length = 653
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 287/533 (53%), Gaps = 50/533 (9%)
Query: 32 WRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLE-YVVDIPLDPYLFETI 90
W P + Y+ L ++ +V ++ ++ + + K+G E + + +D ++
Sbjct: 51 WENNPIISYSEMLSLINDGQVESMKINQN-GNVEILSKDGTTYESFSPALVIDKQYVNSL 109
Query: 91 ASSGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDM 150
G +V+ ++ ++ +LI ++P I+++ L L+ ++S N F
Sbjct: 110 IQKGIKVEYVESVGTKWWFGLLINIIP-IVVMVLF---FFWLYRSASAGARSSMN--FGK 163
Query: 151 AYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLS 210
+ A+ + P+G K +K+V +V D +++++ ++ NP ++ E G + +G LL
Sbjct: 164 SGAKKY-EPIG----EKVTFKDVAGIDEVLDEIEDIVKFLKNPQEFQELGARMPKGTLLV 218
Query: 211 GPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMFSIARRNAPAFVFVD 269
GPPGTGKTL AR +A E+ +PF +ASG++F + GA+R+ ++F A+ NAPA +F+D
Sbjct: 219 GPPGTGKTLTARAIAGEADVPFYYASGSDFVELFVGVGASRVRDLFKTAKENAPAIIFID 278
Query: 270 EIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPD 324
E+DA+ AG D R + T AL+ +LDG F V+ + ATNRPD
Sbjct: 279 ELDAVGRQRGAGLGGGNDEREQ-TLNALLVELDG---------FDTSTGVVVMAATNRPD 328
Query: 325 ELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADI 384
LD +RPGR D+++ +G PD K R +I +H+ K++A DV+ + L RT GF GAD+
Sbjct: 329 VLDKALLRPGRFDKKIMVGPPDVKGREEILKIHTRKKKIAPDVDLKLLAKRTPGFVGADL 388
Query: 385 RNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLL 444
NLVNE+ +++ RK ++++ D + +D+ +L G K + +S ++K++L
Sbjct: 389 ENLVNEAALIASRKKKNQVEMSDFEEAIDR-VLTG---------PSKKYRIISDKEKKIL 438
Query: 445 AVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVV 504
+ HE GH VLA+L P D ++P G + S E D+ + ++VV
Sbjct: 439 SYHELGHAVLAYLLPNTDPVYKITIIPRGAGSLGSTLQIPEK--DKYLIKKSEILDRIVV 496
Query: 505 AHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVG 557
A GGR +E+LVF + T G KDDL K T A+ M+ RL G+++R+G
Sbjct: 497 ALGGRASEKLVF-NFATTGAKDDLRKATDYAKSMIY-----RL---GMSKRMG 540
>sp|B8G4Q6|FTSH_CHLAD ATP-dependent zinc metalloprotease FtsH OS=Chloroflexus aggregans
(strain MD-66 / DSM 9485) GN=ftsH PE=3 SV=1
Length = 656
Score = 244 bits (623), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 139/364 (38%), Positives = 211/364 (57%), Gaps = 28/364 (7%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L E++ ++ P ++ G + RGVL+ GPPGTGKTL +R +A E+G+PF SG+EF +
Sbjct: 181 LAEIVEFLKFPDKFAALGARIPRGVLMVGPPGTGKTLLSRAVAGEAGVPFFSISGSEFVE 240
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQL 296
GA+R+ ++F A+RNAP VF+DEIDA+ AG D R + T ++ ++
Sbjct: 241 MFVGVGASRVRDLFDQAKRNAPCIVFIDEIDAVGRQRGAGLGGSHDEREQ-TLNQILVEM 299
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F VI I ATNRPD LD VRPGR DR++ + PD + R++I V
Sbjct: 300 DG---------FDTNTNVIVIAATNRPDVLDPALVRPGRFDRQVVLDAPDVRGRIEILKV 350
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H GK LAEDVN E L +T GFSGAD+ N+VNE+ I++ R+ KI + D +++
Sbjct: 351 HVKGKPLAEDVNLEILARQTPGFSGADLMNVVNEAAILAARRSKRKISMAEFQDAVERVA 410
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
+ G ++ + ++ +K ++A HEAGH ++ P+ D ++P G+
Sbjct: 411 IGG---------PERRSRVMTDRQKLVVAYHEAGHAIVGAALPKADKVQKVTIIPRGQAG 461
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIA 535
++F P ED+++ T K ++ V+ GGR AE +VFG+ +VT G DL ++T+IA
Sbjct: 462 GYTLFLPDEDSLN--LRTVSQFKARLAVSLGGRVAEEIVFGNEEVTTGASGDLVQVTRIA 519
Query: 536 REMV 539
R MV
Sbjct: 520 RAMV 523
>sp|B9L3S8|FTSH2_THERP ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH2 PE=3 SV=1
Length = 699
Score = 242 bits (617), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/381 (38%), Positives = 217/381 (56%), Gaps = 39/381 (10%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L +++ ++ NP +Y+ G + RGVLL GPPGTGKTL AR +A E+G+PF S +EF +
Sbjct: 263 LAQVVDFLKNPAKYHRIGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVE 322
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQL 296
GA+R+ ++F A+ AP+ +F+DE+DA+ AG D R + T L+ ++
Sbjct: 323 MFVGVGASRVRDLFERAKAQAPSIIFIDELDAVGRQRFAGLGVGNDEREQ-TLNQLLVEM 381
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F V+ I ATNRPD LD +RPGR DR++ +GLPD + R I +
Sbjct: 382 DG---------FEAHTDVVVIAATNRPDVLDPALLRPGRFDRQVVVGLPDKRGRAAILRI 432
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ G +A DV+ E L T GFSGAD+ NLVNE+ +++ R+G + + D + LDK L
Sbjct: 433 HTRGIPIAPDVDLEGLAAATPGFSGADLANLVNEAALVAARRGKQVVDRSDFEEALDKML 492
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
L LL +S E++RL+A HEAGH V+A+ P D ++P G+
Sbjct: 493 LGTTRSLL-----------MSQEERRLVAYHEAGHAVVAYFTPGADPLRKISIVPRGRAL 541
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAR 536
++V P ED + T L ++ V GGR AE+LVF +VT G ++DL++ T++AR
Sbjct: 542 GVTVQAPEEDRFN---YTRNQLLGRLAVLLGGRAAEQLVF-HEVTTGAQNDLKEATQLAR 597
Query: 537 EMVISPQNARLGLAGLTRRVG 557
MV GL G++ +G
Sbjct: 598 RMV--------GLWGMSEELG 610
>sp|B8I4B9|FTSH_CLOCE ATP-dependent zinc metalloprotease FtsH OS=Clostridium
cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584
/ H10) GN=ftsH PE=3 SV=1
Length = 619
Score = 241 bits (616), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 144/384 (37%), Positives = 215/384 (55%), Gaps = 31/384 (8%)
Query: 163 VSDTKSMYKEVVLGGDVW-DLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFA 221
V D K + E V G D + L E++ ++ P ++ E G + +GVLL GPPGTGKTL A
Sbjct: 155 VDDKKKITFENVAGADEEKEELAEIVEFLKAPKKFVELGARIPKGVLLVGPPGTGKTLLA 214
Query: 222 RTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-- 278
+ ++ E+G+PF SG++F + GA+R+ ++F A++NAP VF+DEIDA+ GRH
Sbjct: 215 KAVSGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAV-GRHRG 273
Query: 279 ---ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGR 335
R T L+ ++DG F + + VI + ATNRPD LD +RPGR
Sbjct: 274 AGLGGGHDEREQTLNQLLVEMDG---------FGINEGVIILAATNRPDILDPALLRPGR 324
Query: 336 IDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMS 395
DRR+ +GLPD K R QI VHS GK LA+DV ++L T GF+GADI NL+NE+ +++
Sbjct: 325 FDRRVVVGLPDIKGREQILKVHSRGKPLADDVRLDDLARITPGFTGADIENLLNEAALLT 384
Query: 396 VRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLA 455
R KI ++I + K V++ E++ + +S K++ A HEAGH +
Sbjct: 385 ARANKKKIGNEEIKEAAFK-------VMMGPEKKSRV---MSEHDKKVTAYHEAGHAIAI 434
Query: 456 HLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLV 515
L ++P G + P+E D+ Y T L ++++A GGR AE +
Sbjct: 435 KLVSSSQKVDRVSIIPAGMAGGYTASRPQE---DKSYHTRSQLIEEIIIALGGRAAEEIT 491
Query: 516 FGDDVTDGGKDDLEKITKIAREMV 539
D+V+ G DL+K+ +IAR MV
Sbjct: 492 M-DEVSTGASSDLKKVNQIARNMV 514
>sp|D5HA94|FTSH2_SALRM ATP-dependent zinc metalloprotease FtsH 2 OS=Salinibacter ruber
(strain M8) GN=ftsH2 PE=3 SV=1
Length = 683
Score = 240 bits (612), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 176/539 (32%), Positives = 276/539 (51%), Gaps = 61/539 (11%)
Query: 24 ALWIAKRWW---RYRPKLPYTYF-----LEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLE 75
ALW W ++ Y+ F E ++ EV LK ++G +E
Sbjct: 40 ALWAYSYWGMGASGGERISYSEFRTQLQQENVERVEVKGNAINGSLKSQATRSEQGNTIE 99
Query: 76 YVVDIPLDPYLFETIASSGAE--VDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLH 133
Y + P S G E +DLL+ + ++ K + G++I+ L+ V+LL
Sbjct: 100 YQNFVTYLP-------SFGDEQLMDLLESQGVNVVTKPESSFPWGLVIMGLL--PVLLLF 150
Query: 134 ITSSRLLYKKYNQ---LFDMAYAENFILPVGYVSDTKSMYKEVVLGGD-VWDLLDELMIY 189
L + +Q LF + ++ + Y D + + V G D + L E++ +
Sbjct: 151 GVGYIFLRRMQSQGQGLFSVRQSKAEL----YDKDEEDTTFDDVAGADSAKEELREIIKF 206
Query: 190 MGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGA 248
+ NP ++ G + +GVLL GPPGTGKTL AR +A E+ PF SG++F + GA
Sbjct: 207 LKNPKRFEGLGGKVPKGVLLVGPPGTGKTLLARAVAGEANAPFFSVSGSDFMEMFVGVGA 266
Query: 249 ARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKERT 303
+R+ +MFS A+ +PA +F+DE+D+I AG D R + T L+++LDG
Sbjct: 267 SRVRDMFSEAKETSPAIIFIDELDSIGRKRGAGLGGGNDEREQ-TLNQLLSELDG----- 320
Query: 304 GIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQL 363
F + VI + ATNRPD LD RPGR DR++ + LP + R +I +H+ K L
Sbjct: 321 ----FEENEGVIVMAATNRPDILDSALTRPGRFDRQITVDLPTKQSRHEILKIHAREKPL 376
Query: 364 AEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL--LEGMG 421
++DV+ EE+ T GFSGAD+ NL+NE+ +++ R GH IQ DI DK + L+ G
Sbjct: 377 SDDVDLEEIARSTPGFSGADLENLLNEAALLAGRHGHDAIQYSDIEQARDKVMMGLKRDG 436
Query: 422 VLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVF 481
++L +EE K+LLA HEAGH ++ + P D ++P GK ++
Sbjct: 437 MVLDDEE------------KKLLAYHEAGHAIVGAVLPNADPVHKVTIVPRGKAMGVTQQ 484
Query: 482 YPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVI 540
P + DQ Y+ ++ V GGR AE L+F D T G ++DL+++ K+AR+MV+
Sbjct: 485 LPEK---DQYLYRHDYILDRLAVIMGGRAAEELIF-DTATSGAENDLKQVRKMARKMVL 539
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 239 bits (609), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 138/381 (36%), Positives = 220/381 (57%), Gaps = 30/381 (7%)
Query: 165 DTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTL 224
D + + +V + + L E++ ++ P ++ E G + +GVLL GPPGTGKTL A+ +
Sbjct: 155 DKRVTFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLVGPPGTGKTLLAKAV 214
Query: 225 AKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRH 278
A E+G+PF SG++F + GAAR+ ++F A++NAP VF+DEIDA+ AG
Sbjct: 215 AGEAGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDAVGRQRGAGLG 274
Query: 279 ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDR 338
D R + T L+ ++DG FS+ + +I I ATNRPD LD +RPGR DR
Sbjct: 275 GGHDEREQ-TLNQLLVEMDG---------FSVNEGIIVIAATNRPDILDPALLRPGRFDR 324
Query: 339 RLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 398
+ +G+PD K R +I +HS K LA DV+ + L RT GF+GAD+ NL+NE+ +++ R+
Sbjct: 325 HITVGIPDIKGREEILKIHSRNKPLAPDVSLQVLARRTPGFTGADLENLMNEAALLAARR 384
Query: 399 GHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLF 458
G +I ++ + + + V+ E++ + +S + K+L+A HEAGH V+A L
Sbjct: 385 GLKQITMAELEEAITR-------VIAGPEKRSRI---MSEKDKKLVAYHEAGHAVVAKLL 434
Query: 459 PRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD 518
P ++P G+ ++ P ED Y + + ++V GGR AE LV +
Sbjct: 435 PNTPPVHEVTIIPRGRAGGYTMLLPEEDKY---YMSKSEMMDEIVHLLGGRVAESLVL-N 490
Query: 519 DVTDGGKDDLEKITKIAREMV 539
D++ G ++D+E+ T IAR+MV
Sbjct: 491 DISTGAQNDIERATNIARKMV 511
>sp|A6TWP7|FTSH2_ALKMQ ATP-dependent zinc metalloprotease FtsH 2 OS=Alkaliphilus
metalliredigens (strain QYMF) GN=ftsH2 PE=3 SV=1
Length = 689
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 133/363 (36%), Positives = 212/363 (58%), Gaps = 30/363 (8%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
++EL+ ++ NP +Y E G + +G+L+ GPPGTGKT + +A E+G+PF SG++F +
Sbjct: 177 VEELVDFLKNPKKYIELGARIPKGILMIGPPGTGKTYLTKAVAGEAGVPFFSISGSDFVE 236
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQL 296
GA+R+ ++F A+++AP +F+DEIDA+ AG D R + T L+ ++
Sbjct: 237 MFVGVGASRVRDLFEQAKKSAPCIIFIDEIDAVGRKRGAGLGGGHDEREQ-TLNQLLVEM 295
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F + + +I + ATNRPD LD +RPGR DR++ +G PD K R QI V
Sbjct: 296 DG---------FGINEGIIIVAATNRPDILDPALLRPGRFDRQVMVGAPDIKGREQILQV 346
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ GK L EDVN + L RT GF+ ADI NL+NE+ +++ RK KI+ + + + + K +
Sbjct: 347 HAKGKPLDEDVNLKVLARRTPGFTPADIENLMNEAALLTARKNEKKIKMETVEEAITK-V 405
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
+ G+ +K + +S ++++L A HEAGH V+A L D ++P G+
Sbjct: 406 IAGL---------EKKSRVISEKERKLTAYHEAGHAVVAKLLTHTDPVHQVTIIPRGRAG 456
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAR 536
++ P ED Y T ++ +V GGR AE+LV D++ G +DL++++ IAR
Sbjct: 457 GFTMTLPTEDKY---YVTKTEMQEHIVHLLGGRVAEKLVL-HDISTGASNDLQRVSSIAR 512
Query: 537 EMV 539
MV
Sbjct: 513 AMV 515
>sp|B7T1V0|FTSH_VAULI ATP-dependent zinc metalloprotease FtsH OS=Vaucheria litorea
GN=ftsH PE=3 SV=1
Length = 644
Score = 236 bits (601), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/370 (37%), Positives = 211/370 (57%), Gaps = 38/370 (10%)
Query: 189 YMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKS-G 247
++ P ++ G + +GV+L GPPGTGKTL A+ +A E+G+PF+ SG+EF + G
Sbjct: 193 FLRKPQRFLSVGAKIPKGVILIGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIG 252
Query: 248 AARINEMFSIARRNAPAFVFVDEIDAI-----AGRHARKDPRRRATFEALIAQLDGDKER 302
A+R+ ++F A++NAP VF+DEIDA+ AG D R + T ++ ++DG KE
Sbjct: 253 ASRVRDLFKTAQQNAPCIVFIDEIDAVGRQRGAGIGGGNDEREQ-TLNQILTEMDGFKEN 311
Query: 303 TGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQ 362
TGI I I ATNR D LD +RPGR DR++ I LPD K R++I VH+ K+
Sbjct: 312 TGI---------IVIAATNRVDVLDGALLRPGRFDRQVSINLPDIKGRLEILKVHAKNKK 362
Query: 363 LAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGM-G 421
L +++ + RT GFSGAD+ NL+NES I++ R+ I ++ +D+ LL G+ G
Sbjct: 363 LDSNISLGLIAQRTPGFSGADLANLLNESAILTARRNKFAITMSEVNTAIDR-LLAGLEG 421
Query: 422 VLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVF 481
LT+ + KRL+A HE GH V+ L D L+P G+ ++ F
Sbjct: 422 TSLTDTKN-----------KRLIAYHEIGHAVIGTLLKYHDEVQKVTLIPRGQARGLTWF 470
Query: 482 YPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMVI 540
P + +Q + G L +++ GGR AE +VFG ++T G +DL++IT + R+MV
Sbjct: 471 IPND---EQALISRGQLVARIIGTLGGRAAEEVVFGSSEITTGASNDLQQITNLTRQMV- 526
Query: 541 SPQNARLGLA 550
RLG++
Sbjct: 527 ----TRLGMS 532
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 235 bits (599), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 142/414 (34%), Positives = 227/414 (54%), Gaps = 38/414 (9%)
Query: 167 KSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAK 226
K + +V + L E+ ++ NP ++ + G + +G LL GPPGTGKTL AR +A
Sbjct: 185 KVTFADVAGADEAVQELTEIKEFLENPQKFQKLGARIPKGALLVGPPGTGKTLLARAVAG 244
Query: 227 ESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHAR 280
E+G+PF SG++F + GA+R+ ++F A++N+P +FVDEIDA+ AG
Sbjct: 245 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAVGRQRGAGLGGG 304
Query: 281 KDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRL 340
D R + T L+ ++DG F + +I + ATNRPD LD +RPGR DR++
Sbjct: 305 HDEREQ-TLNQLLVEMDG---------FDSKSGIIMLAATNRPDILDPALLRPGRFDRQI 354
Query: 341 YIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGH 400
+ PD R++I VH+ GK L EDV+ E + T GF+GAD+ NLVNE+ +++ R
Sbjct: 355 VVDRPDLPGRIKILKVHTRGKPLGEDVDIETIARGTPGFTGADLANLVNEAALLAARHNK 414
Query: 401 SKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPR 460
+I+ ++ + +D+ V+ E + + +S ++K + A HEAGH ++ L P
Sbjct: 415 EQIEMAEMEEAIDR-------VIAGPERKTRL---ISEKEKEITAYHEAGHAIVGALLPE 464
Query: 461 FDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDV 520
D ++P G+ +++ P ED + L Q+ GGR AER+VF +++
Sbjct: 465 ADPVHKVTIIPRGQALGVTMSLPEEDRF---MMSRAQLMAQLSYMLGGRAAERVVF-EEI 520
Query: 521 TDGGKDDLEKITKIAREMVIS-PQNARLGLAGLTRRVG-------LLDRPDSSD 566
T G +D+E+ TK+AR+MV + +LGL L + G L +PD SD
Sbjct: 521 TTGASNDIERATKVARQMVTRYGMSEKLGLIALGQHDGQVFMGRDLHAQPDYSD 574
>sp|A0PXM8|FTSH_CLONN ATP-dependent zinc metalloprotease FtsH OS=Clostridium novyi
(strain NT) GN=ftsH PE=3 SV=1
Length = 676
Score = 233 bits (595), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 128/380 (33%), Positives = 219/380 (57%), Gaps = 30/380 (7%)
Query: 167 KSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAK 226
K +K+V + L+E++ ++ P +Y + G + +G+LL GPPGTGKTL A+ +A
Sbjct: 164 KVTFKDVAGADEEKGELEEIVDFLKEPKKYLDMGARIPKGILLVGPPGTGKTLLAKAVAG 223
Query: 227 ESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHAR 280
E+G+PF SG++F + GA+R+ ++F A++N+P +F+DEIDA+ AG
Sbjct: 224 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIIFIDEIDAVGRQRGAGLGGG 283
Query: 281 KDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRL 340
D R + T L+ ++DG F + + +I + ATNRPD LD +RPGR DR++
Sbjct: 284 HDEREQ-TLNQLLVEMDG---------FGVNEGIILVAATNRPDILDKALLRPGRFDRQI 333
Query: 341 YIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGH 400
+G PDAK R ++ VH K+L++DV+ + L RT GF GAD+ NL+NE+ +++VR
Sbjct: 334 LVGAPDAKGREEVLKVHVRNKRLSDDVDLKVLAKRTPGFVGADLENLMNEAALLAVRANK 393
Query: 401 SKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPR 460
+I +++ + + + V+ E++ + + E +++ A HEAGH ++ P
Sbjct: 394 KQIGMEELEEAITR-------VIAGPEKKSRV---IHEEDRKITAYHEAGHAIVMKFSPH 443
Query: 461 FDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDV 520
D ++P G ++ P DT Y + LK +MV GGR AE+++ G D+
Sbjct: 444 SDPVHEISIIPRGMAGGYTMHLPERDT---SYMSKSKLKDEMVGLLGGRVAEQIIIG-DI 499
Query: 521 TDGGKDDLEKITKIAREMVI 540
+ G +D+++++ IAR+MV+
Sbjct: 500 STGASNDIQRVSNIARKMVM 519
>sp|Q9TJ83|FTSH_CYAME ATP-dependent zinc metalloprotease FtsH OS=Cyanidioschyzon merolae
GN=ftsH PE=3 SV=1
Length = 603
Score = 233 bits (593), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 223/399 (55%), Gaps = 40/399 (10%)
Query: 163 VSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFAR 222
V+ T M+ +V + + L E++ ++ NP ++ G +GVLL GPPGTGKTL A+
Sbjct: 146 VAKTGIMFDDVAGIEEAKEELAEVVAFLKNPSKFLAVGASIPKGVLLVGPPGTGKTLLAK 205
Query: 223 TLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AG 276
+A E+ +PF SG+EF + GA+R+ ++F A++NAP VF+DEIDA+ AG
Sbjct: 206 AIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAPCLVFIDEIDAVGRQRGAG 265
Query: 277 RHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRI 336
D R + T L+ ++DG + TG VI I ATNR D LD +RPGR
Sbjct: 266 IGGGNDEREQ-TLNQLLTEMDGFEGNTG---------VIVIAATNRVDVLDAALLRPGRF 315
Query: 337 DRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSV 396
DR++ + +PD K R+ I VH+ K+L V+ E + RT GF+GAD+ NL+NE+ I++V
Sbjct: 316 DRQIMVSMPDVKSRIAILKVHANQKKLHPQVSLEAVARRTAGFAGADLANLLNEAAILAV 375
Query: 397 RKGHSKIQQQDIVDVLDKQL--LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVL 454
R+G +I ++I D +D+ + +EG ++ + KRL+A HE GH +
Sbjct: 376 RRGLKQITWKEIDDAIDRVIAGMEGTPIM-------------DGKIKRLIAYHETGHALT 422
Query: 455 AHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERL 514
A L P L+P + ++ F +D ++ + L ++VA GGR AE
Sbjct: 423 ATLLPNHPPVQKVTLIPRRQAKGLTWFM--QDN-ERDLLSKSQLMSMIMVALGGRAAEEA 479
Query: 515 VFGD-DVTDGGKDDLEKITKIAREMVISPQNARLGLAGL 552
VFG+ +VT G +DL+++T +AR+MV R G++ L
Sbjct: 480 VFGNAEVTTGASNDLQQVTNLARQMV-----TRFGMSSL 513
>sp|Q8YMZ8|FTSH_NOSS1 ATP-dependent zinc metalloprotease FtsH OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ftsH PE=3 SV=1
Length = 656
Score = 232 bits (591), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 264/538 (49%), Gaps = 55/538 (10%)
Query: 35 RPKLPYTYFLEKLDSSEVAAVVF--TEDLKRLYVT-MKEGFPLEYVVDIPLDPYLFETIA 91
R L Y ++K++ +V V TE + ++Y+ K P V + + L +
Sbjct: 71 RESLSYGELIQKVNQEQVKRVELDETEQIAKVYLKGQKPDAPPIQVRLLEQNNELINRLK 130
Query: 92 SSG---AEVDLLQKRQIHYFLKVLIALLP--GILILSLIRETVMLLHITSSRLLYKKYNQ 146
E+ R L L+ +LP +++L L R T + +S + + K
Sbjct: 131 EKNVDFGEISSANSRAAVGLLINLMWILPLVALMLLFLRRST----NASSQAMNFGKSRA 186
Query: 147 LFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRG 206
F M + T + +V + + L E++ ++ P ++ G + +G
Sbjct: 187 RFQME------------AKTGVKFDDVAGIEEAKEELQEVVTFLKQPERFTAVGARIPKG 234
Query: 207 VLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAF 265
VLL GPPGTGKTL A+ +A E+ +PF SG+EF + GA+R+ ++F A+ NAP
Sbjct: 235 VLLVGPPGTGKTLLAKAIAGEAAVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCL 294
Query: 266 VFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICAT 320
+F+DEIDA+ GR + R T L+ ++DG + TGI I I AT
Sbjct: 295 IFIDEIDAV-GRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGI---------IIIAAT 344
Query: 321 NRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFS 380
NRPD LD +RPGR DR++ + PD K R++I VHS K++ V+ E + RT GF+
Sbjct: 345 NRPDVLDSALLRPGRFDRQVIVDAPDLKGRLEILQVHSRNKKVDPSVSLEAIARRTPGFT 404
Query: 381 GADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEK 440
GAD+ NL+NE+ I++ R+ I +I D +D+ + G L V +
Sbjct: 405 GADLANLLNEAAILTARRRKEAITILEIDDAVDRVVAGMEGTPL-----------VDSKS 453
Query: 441 KRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKM 500
KRL+A HE GH ++ L D L+P G+ ++ F P E +QG + LK
Sbjct: 454 KRLIAYHEVGHGLVGTLLKDHDPVQKVTLIPRGQAQGLTWFTPNE---EQGLISRSQLKA 510
Query: 501 QMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVG 557
++ GR AE +VFG +VT G DDL+K+T +AR+MV + LG L + G
Sbjct: 511 RITSTLAGRAAEEIVFGKPEVTTGAGDDLQKVTSMARQMVTKFGMSELGPLSLENQSG 568
>sp|D3F124|FTSH1_CONWI ATP-dependent zinc metalloprotease FtsH 1 OS=Conexibacter woesei
(strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
GN=ftsH1 PE=3 SV=1
Length = 653
Score = 232 bits (591), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 214/384 (55%), Gaps = 30/384 (7%)
Query: 163 VSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFAR 222
V K +++V + + L E+ ++ NP ++ G + +GVLL GPPGTGKTL AR
Sbjct: 150 VDSPKITFRDVAGADEAVEELHEIKEFLENPKKFQALGARIPKGVLLYGPPGTGKTLLAR 209
Query: 223 TLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH--- 278
+A E+G+PF SG++F + GA+R+ ++F A++NAP +F+DEIDA+ GRH
Sbjct: 210 AVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKQNAPCIIFMDEIDAV-GRHRGA 268
Query: 279 --ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRI 336
R T L+ ++DG F + +I I ATNRPD LD +RPGR
Sbjct: 269 GMGGGHDEREQTLNQLLVEMDG---------FEAKDNIIMIAATNRPDILDPALLRPGRF 319
Query: 337 DRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSV 396
DR++ + PD K R +I +VH+ GK LA +++ + L +T GF+GAD+ NLVNE+ +++
Sbjct: 320 DRQVTVDRPDRKGRSKILEVHTRGKPLAREIDIDALAGQTPGFTGADLANLVNEAALLAA 379
Query: 397 RKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAH 456
R G +I Q ++ + G++ +K + +S E++R+ A HE GH ++ H
Sbjct: 380 RTGKREITQVELEE----------GIMRVIAGPEKKTRVMSSEERRITAYHEMGHALVGH 429
Query: 457 LFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVF 516
D ++ G+ ++ P+ED TT L M + GGR AE ++F
Sbjct: 430 FLEHADPVHKISVIGRGQALGYTISMPQEDKF---LTTRAALGDTMAMTLGGRAAEEIIF 486
Query: 517 GDDVTDGGKDDLEKITKIAREMVI 540
G ++T G +DLEK+T A++MV+
Sbjct: 487 G-EITTGASNDLEKVTGTAKQMVM 509
>sp|D1C2C6|FTSH2_SPHTD ATP-dependent zinc metalloprotease FtsH 2 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsH2 PE=3
SV=1
Length = 652
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 148/392 (37%), Positives = 214/392 (54%), Gaps = 38/392 (9%)
Query: 178 DVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASG 237
+V D++D Y+ +P ++ G + RGVLL+GPPGTGKTL R LA E+ F SG
Sbjct: 171 EVADIVD----YLRDPERFRRLGARIPRGVLLTGPPGTGKTLLTRALAGEARASFFSVSG 226
Query: 238 AEFTDSEKS-GAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRR--ATFEALIA 294
+EF + GA+R+ E+F A+ NAPA +F+DEIDAI R R + T ++
Sbjct: 227 SEFVELYVGVGASRVRELFRKAKENAPAIIFIDEIDAIGRRRGRMEQSSEYDQTLNQILV 286
Query: 295 QLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIF 354
++DG +ERT V+ + ATNR D LD +RPGR DR++ + LPD K R I
Sbjct: 287 EMDGFEERT---------TVVVVAATNRVDILDPALLRPGRFDRKVVVDLPDRKARRAIL 337
Query: 355 DVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDK 414
+VH+ GK LAE+VN +EL RT G +GAD+ N++NE+ I++ R I QD+++ LD+
Sbjct: 338 EVHARGKPLAENVNLDELAARTTGMTGADLANVINEAAILAARDRRETITNQDLLEALDR 397
Query: 415 QLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGK 474
L + + S ++R++A HEAGH V+AHL P D ++ G+
Sbjct: 398 TL----------AGPARNARRFSERERRVVAYHEAGHAVVAHLLPHADPVRKVSIVSRGR 447
Query: 475 ETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKI 534
++ P E D+G T L ++ GG AE L+FG D+T G +DLE+ T I
Sbjct: 448 AGGYTMIVPDE---DRGLWTRAQLSDRLAALLGGLAAEELIFG-DITTGSSNDLEQTTAI 503
Query: 535 AREMVISPQNARLGLAGLTRRVGLLDRPDSSD 566
A MV G+ +R GLL SD
Sbjct: 504 ATSMVQR--------YGMGKRFGLLSTGAGSD 527
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 229 bits (585), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 137/365 (37%), Positives = 206/365 (56%), Gaps = 33/365 (9%)
Query: 185 ELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS- 243
E++ ++ P ++ G + +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF +
Sbjct: 241 EVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 300
Query: 244 EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDG 298
GA+R+ ++F A+ NAP VFVDEIDA+ GR + R T L+ ++DG
Sbjct: 301 VGVGASRVRDLFKKAKENAPCIVFVDEIDAV-GRQRGTGIGGGNDEREQTLNQLLTEMDG 359
Query: 299 DKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHS 358
+ TG VI + ATNR D LD +RPGR DR++ + +PD K R I VH+
Sbjct: 360 FEGNTG---------VIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHA 410
Query: 359 AGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLE 418
K+ DV+ E + RT GFSGAD+ NL+NE+ I++ R+ + I ++I D +D+ ++
Sbjct: 411 GNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDR-IVA 469
Query: 419 GM-GVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETA 477
GM G ++T+ + K L+A HE GH V L P D L+P G+
Sbjct: 470 GMEGTVMTDGKS-----------KSLVAYHEVGHAVCGTLTPGHDAVQKVTLIPRGQARG 518
Query: 478 ISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIAR 536
++ F P +D + L ++V GGR AE ++FGD +VT G DL++IT +AR
Sbjct: 519 LTWFIPSDDPT---LISKQQLFARIVGGLGGRAAEEIIFGDSEVTTGAVGDLQQITGLAR 575
Query: 537 EMVIS 541
+MV +
Sbjct: 576 QMVTT 580
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 229 bits (584), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 209/365 (57%), Gaps = 33/365 (9%)
Query: 185 ELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS- 243
E++ ++ P ++ G + +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF +
Sbjct: 228 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 287
Query: 244 EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDG 298
GA+R+ ++F A+ NAP VFVDEIDA+ GR + R T L+ ++DG
Sbjct: 288 VGVGASRVRDLFKKAKENAPCIVFVDEIDAV-GRQRGTGIGGGNDEREQTLNQLLTEMDG 346
Query: 299 DKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHS 358
+ TGI I I ATNR D LD +RPGR DR++ + +PD + R +I VH
Sbjct: 347 FEGNTGI---------IVIAATNRADILDSALLRPGRFDRQVSVDVPDVRGRTEILKVHG 397
Query: 359 AGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLE 418
+ K+ DV+ E + RT GFSGAD+ NL+NE+ I++ R+G + I ++I D +D+ ++
Sbjct: 398 SNKKFDTDVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGRTAISSKEIDDSIDR-IVA 456
Query: 419 GM-GVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETA 477
GM G ++T+ + K L+A HE GH + L P D L+P G+
Sbjct: 457 GMEGTVMTDG-----------KSKSLVAYHEVGHAICGTLTPGHDPVQKVTLIPRGQARG 505
Query: 478 ISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIAR 536
++ F P +D + L ++V GGR AE ++FG+ +VT G DL++IT +A+
Sbjct: 506 LTWFIPMDDPT---LISRQQLFARIVGGLGGRAAEEIIFGEPEVTTGAAGDLQQITGLAK 562
Query: 537 EMVIS 541
+MV++
Sbjct: 563 QMVVT 567
>sp|P49825|FTSH_ODOSI ATP-dependent zinc metalloprotease FtsH OS=Odontella sinensis
GN=ftsH PE=3 SV=1
Length = 644
Score = 229 bits (584), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 144/412 (34%), Positives = 219/412 (53%), Gaps = 40/412 (9%)
Query: 165 DTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTL 224
DT +K++ + +E++ ++ P +Y G + +G+LL GPPGTGKTL A+ +
Sbjct: 180 DTGVSFKDIAGIDEAKTEFEEIVSFLKEPDKYTIVGAKIPKGILLVGPPGTGKTLLAKAI 239
Query: 225 AKESGLPFVFASGAEFTDSEKS-GAARINEMFSIARRNAPAFVFVDEIDAI-----AGRH 278
A E+ +PF +G+EF + GAAR+ ++F A NAP VF+DEIDA+ AG
Sbjct: 240 ANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFIDEIDAVGRERGAGVG 299
Query: 279 ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDR 338
D R + T L+ ++DG KE G VI + ATNR D LD +RPGR DR
Sbjct: 300 GGNDEREQ-TLNQLLTEMDGFKENKG---------VIVVGATNRADILDAALLRPGRFDR 349
Query: 339 RLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRK 398
++ + LPD RV I VH+ K L EDV+ +L RT GFSGAD+ NL+NE+ I++ R
Sbjct: 350 QVTVNLPDRLGRVGILKVHARNKPLGEDVSLVQLANRTPGFSGADLANLLNEAAILATRY 409
Query: 399 GHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLF 458
S I + ++ + D+ ++ G+ E+ + KRL+A HE GH + +
Sbjct: 410 KKSSITKNEVNEAADR-IIGGIAGAPMEDTKN----------KRLIAYHEVGHAITGSVL 458
Query: 459 PRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD 518
D L P G ++ F P E DQ + L +++ GGR AE+++FG+
Sbjct: 459 KSHDEVEKITLTPRGGAKGLTWFTPEE---DQSLLSRSALLARIITTLGGRAAEQVIFGE 515
Query: 519 -DVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPDSSDGDL 569
+VT G DL+++T +AR+MV R G++ +G L D S G +
Sbjct: 516 PEVTTGASSDLQQVTNLARQMV-----TRFGMS----NIGPLALEDESTGQV 558
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 229 bits (583), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 267/535 (49%), Gaps = 51/535 (9%)
Query: 37 KLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIASSGAE 96
++ Y+ FL+K+D++E+ V + K T Y P DP L + + ++
Sbjct: 36 EVSYSEFLQKIDNNELKTVTI-QGQKLTGQTADRRMISTYA---PRDPGLVQRLNTNKVN 91
Query: 97 VDLLQKRQIHY-FLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMAYAEN 155
+ + + + FL +L +LLP ++I+ + + S L F + A+
Sbjct: 92 IRAVPESSGNSIFLNLLFSLLPVLIIVGAWIFFMRQMQGGSRGALG------FGKSKAKL 145
Query: 156 FILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGT 215
G V+ +K+V + L E++ ++ P ++ G + RGVLL GPPGT
Sbjct: 146 LTEAQGRVT-----FKDVAGVEEAKQDLQEIVDFLREPQKFQRLGGRIPRGVLLVGPPGT 200
Query: 216 GKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI 274
GKTL AR++A E+ +PF SG++F + GA+R+ +MF A++NAP +F+DEIDA+
Sbjct: 201 GKTLLARSIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAV 260
Query: 275 AGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLE 329
GRH + R T L+ ++DG F +++I I ATNRPD LD
Sbjct: 261 -GRHRGAGLGGGNDEREQTLNQLLVEMDG---------FEPNESIILIAATNRPDVLDPA 310
Query: 330 FVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVN 389
+RPGR DR++ + PD R +I +VH LA +VN L T GFSGAD+ NLVN
Sbjct: 311 LLRPGRFDRQVVVPNPDVAGREKILEVHVRNVPLAPNVNLRVLARGTPGFSGADLMNLVN 370
Query: 390 ESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEA 449
E+ +M+ + + Q+ D DK + MG ++ +++ E+K L A HEA
Sbjct: 371 EAALMAASRNKKVVTMQEFEDAKDKVM---MGA-------ERRSTAMTQEEKELTAYHEA 420
Query: 450 GHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGR 509
GH ++A P D + ++P G+ + + P D Y ++ ++ + GGR
Sbjct: 421 GHAIVALNVPVSDPVHKATIVPRGRALGMVMQLPEGDRYSMSYL---WMVSRLAIMMGGR 477
Query: 510 CAERLVFG-DDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLDRPD 563
AE L FG +++T G D+E+ TK+AR M+ R G + + V D D
Sbjct: 478 VAEELKFGKENITSGAASDIEQATKLARAMIT-----RWGFSDMLGHVAYGDNQD 527
>sp|C7M0M0|FTSH_ACIFD ATP-dependent zinc metalloprotease FtsH OS=Acidimicrobium
ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882
/ ICP) GN=ftsH PE=3 SV=1
Length = 660
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 164/522 (31%), Positives = 263/522 (50%), Gaps = 70/522 (13%)
Query: 38 LPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIASSGAEV 97
L Y+ F+ + + +V V ++ ++ G Y V PL PY + +E+
Sbjct: 52 LGYSTFIHDVQAKQVRTAVLNNTTGQITGSLTNG--TAYSVTGPL-PY-------TSSEL 101
Query: 98 DLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMAYAENFI 157
L K + + + PG I S I E V+ I +Y + N I
Sbjct: 102 STLSKAHVQ-----VSYITPGPGIASTIIEYVIFFGIFIGIWVYLTRRTQGSV----NGI 152
Query: 158 LPVG------YVSD-TKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLS 210
+ VG Y ++ K+ + +V V + E++ ++ +P ++ + G + +G+LL
Sbjct: 153 MSVGRSRAKTYTTERPKTTFDDVAGYQGVKGEVKEVVDFLRDPSRFSQLGARIPKGILLV 212
Query: 211 GPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVD 269
GPPGTGKTL AR +A E+G+PF+ SG++F + GAAR+ ++F ARR +P+ +F+D
Sbjct: 213 GPPGTGKTLLARAVAGEAGVPFMSVSGSDFMEMFVGVGAARVRDLFQTARRQSPSIIFID 272
Query: 270 EIDAIAGRHARK----DPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDE 325
EID+I + R T +++++DG F + ++ + ATNRPD
Sbjct: 273 EIDSIGRKRGTGLGGGHDEREQTLNQMLSEMDG---------FDPAEGIVVMAATNRPDI 323
Query: 326 LDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIR 385
LD +RPGR DR++ + LPD +R+ I VH+ GK+LA DV+ E + T G SGAD+
Sbjct: 324 LDPALLRPGRFDRQIVVPLPDLPERLAILQVHTRGKRLAPDVDLEVMAKGTPGMSGADLA 383
Query: 386 NLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLA 445
NLVNE+ + +VR+G + I D D+ + MG Q++ +S E+K +A
Sbjct: 384 NLVNEAALNAVRRGATDIAMADFDSARDRII---MG-------QRREATILSDEEKERVA 433
Query: 446 VHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISV--------FYPREDTIDQGYTTFGY 497
HE GH VLA++ D +LP G ++ YPRE Y
Sbjct: 434 FHEGGHAVLAYVLDYSDPVHKVTILPTGMALGVTQQLPERDRHLYPRE-----------Y 482
Query: 498 LKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMV 539
++ +VV GGR AE LV+G D++ G +DL+ T++AR MV
Sbjct: 483 IEDTLVVRMGGRVAELLVYG-DLSTGAANDLQGNTELARRMV 523
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 134/379 (35%), Positives = 216/379 (56%), Gaps = 30/379 (7%)
Query: 167 KSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAK 226
K +++V +V + L E++ ++ NP ++ G + +GVLL GPPGTGKTL AR +A
Sbjct: 159 KVTFEDVANYEEVKEELQEVVEFLKNPDKFTRMGAKVPKGVLLVGPPGTGKTLLARAVAG 218
Query: 227 ESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAI-----AGRHAR 280
E+G+PF SG++F + GA+R+ ++F ++NAP +F+DE+DA+ AG
Sbjct: 219 EAGVPFFIISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDELDAVGRQRGAGLGGG 278
Query: 281 KDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRL 340
D R + T L+ ++DG F + +I + ATNRPD LD +RPGR DR++
Sbjct: 279 HDEREQ-TLNQLLVEMDG---------FEPNEGIIVMAATNRPDVLDPALLRPGRFDRQV 328
Query: 341 YIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGH 400
+ PD K R+ I +H K +A+DV+ E L RT GF+GAD+ NL NE+ I++VR+
Sbjct: 329 VVDKPDVKGRMGILKIHLRNKPVADDVDVEVLAKRTPGFTGADMENLANEAAILAVRRRK 388
Query: 401 SKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPR 460
+KI +D D +DK ++ G K + +S +++L+A HE GH ++ L
Sbjct: 389 NKITMEDFDDAIDK-VIAG---------PAKKSKVMSERERKLVAYHETGHALVGDLLEH 438
Query: 461 FDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDV 520
D ++P G+ + P+E D+ + + L Q+ V GGR +E +F +D+
Sbjct: 439 ADRTHKISIVPRGRAGGMRWALPKE---DKNFMSKQELLDQITVLLGGRASES-IFLEDI 494
Query: 521 TDGGKDDLEKITKIAREMV 539
+ G ++DLE+ TK+AR MV
Sbjct: 495 STGAQNDLERATKLARAMV 513
>sp|Q8W585|FTSH8_ARATH ATP-dependent zinc metalloprotease FTSH 8, chloroplastic
OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
Length = 685
Score = 228 bits (581), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 206/365 (56%), Gaps = 33/365 (9%)
Query: 185 ELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS- 243
E++ ++ P ++ G + +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF +
Sbjct: 234 EVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMF 293
Query: 244 EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDG 298
GA+R+ ++F A+ NAP VFVDEIDA+ GR + R T L+ ++DG
Sbjct: 294 VGVGASRVRDLFKKAKENAPCIVFVDEIDAV-GRQRGTGIGGGNDEREQTLNQLLTEMDG 352
Query: 299 DKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHS 358
+ TG VI + ATNR D LD +RPGR DR++ + +PD K R I VHS
Sbjct: 353 FEGNTG---------VIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHS 403
Query: 359 AGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLE 418
K+ V+ E + RT GFSGAD+ NL+NE+ I++ R+G + I ++I D +D+ ++
Sbjct: 404 GNKKFESGVSLEVIAMRTPGFSGADLANLLNEAAILAGRRGKTAISSKEIDDSIDR-IVA 462
Query: 419 GM-GVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETA 477
GM G ++T+ + K L+A HE GH + L P D L+P G+
Sbjct: 463 GMEGTVMTDGKS-----------KSLVAYHEVGHAICGTLTPGHDAVQKVTLIPRGQARG 511
Query: 478 ISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIAR 536
++ F P +D + L ++V GGR AE ++FG+ +VT G DL++IT +A+
Sbjct: 512 LTWFIPSDDPT---LISKQQLFARIVGGLGGRAAEEVIFGESEVTTGAVSDLQQITGLAK 568
Query: 537 EMVIS 541
+MV +
Sbjct: 569 QMVTT 573
>sp|Q1PDW5|FTSH6_ARATH ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1
Length = 688
Score = 227 bits (579), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 209/364 (57%), Gaps = 31/364 (8%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
+E++ ++ P ++ G + +GVLL+GPPGTGKTL A+ +A E+G+PF SG+EF +
Sbjct: 236 FEEIVEFLKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIE 295
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAIA-----GRHARKDPRRRATFEALIAQL 296
GA+R ++F+ A+ N+P VF+DEIDA+ G D R + T ++ ++
Sbjct: 296 MFVGVGASRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGIGGGNDEREQ-TLNQILTEM 354
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F+ VI I ATNRP+ LD +RPGR DR++ +GLPD + R +I V
Sbjct: 355 DG---------FAGNTGVIVIAATNRPEILDSALLRPGRFDRQVSVGLPDIRGREEILKV 405
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
HS K+L +DV+ + RT GFSGAD+ NL+NE+ I++ R+G KI +I D +D+ +
Sbjct: 406 HSRSKKLDKDVSLSVIAMRTPGFSGADLANLMNEAAILAGRRGKDKITLTEIDDSIDR-I 464
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
+ GM + + + + K ++A HE GH + A L D L+P G+
Sbjct: 465 VAGM----------EGTKMIDGKSKAIVAYHEVGHAICATLTEGHDPVQKVTLVPRGQAR 514
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIA 535
++ F P ED + L ++V GGR AE ++FG+ ++T G DL+++T+IA
Sbjct: 515 GLTWFLPGEDPT---LVSKQQLFARIVGGLGGRAAEDVIFGEPEITTGAAGDLQQVTEIA 571
Query: 536 REMV 539
R+MV
Sbjct: 572 RQMV 575
>sp|D1BLD0|FTSH_VEIPT ATP-dependent zinc metalloprotease FtsH OS=Veillonella parvula
(strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) GN=ftsH
PE=3 SV=1
Length = 642
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 160/511 (31%), Positives = 270/511 (52%), Gaps = 44/511 (8%)
Query: 35 RPKLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIASSG 94
+ +L YT F++++ +V +V T D + +K G E+ P D L +T+ +G
Sbjct: 32 KSELSYTGFIQQVQQKKVESVTITND-HGIKGKLKNG--TEFNSYAPTDETLIKTLQDNG 88
Query: 95 AEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMAYAE 154
E+ Q +++ +L + +P I+++ L + R++ F + A+
Sbjct: 89 VEITAAPPEQPAWWMSLLGSAIPIIILVVLFFFIMQQTQGGGGRVMN------FGKSRAK 142
Query: 155 NFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPG 214
++ G V K +K+V + L+E++ ++ +P ++ G + +GVLL+GPPG
Sbjct: 143 --LMGEGNV---KVSFKDVAGAEEAKQELEEVVEFLKDPGKFTTIGAKIPKGVLLAGPPG 197
Query: 215 TGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDA 273
TGKTL A+ +A E+G+PF SG++F + GA+R+ ++F+ A++NAP +F+DEIDA
Sbjct: 198 TGKTLLAKAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFTQAKKNAPCIIFIDEIDA 257
Query: 274 I-----AGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDL 328
+ AG D R + T L+ ++DG F + +I I ATNRPD LD
Sbjct: 258 VGRQRGAGLGGGHDEREQ-TLNQLLVEMDG---------FGANEGIITIAATNRPDILDP 307
Query: 329 EFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLV 388
+RPGR DR++ +G PD + R I VH+ K LA+DV+ + + +T GF+GAD+ NL+
Sbjct: 308 ALLRPGRFDRQVIVGRPDLRGREAILKVHARNKPLADDVDLKIIAKKTPGFTGADLSNLL 367
Query: 389 NESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHE 448
NE+ +++ R I ++ + +K MG ++ VS + ++L A HE
Sbjct: 368 NEAALLAARLNKKVITMAEVEEASEKV---SMG-------PERRSHIVSDKDRKLTAYHE 417
Query: 449 AGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGG 508
+GH ++AHL P D ++P G ++ P E +Q Y T L + VA GG
Sbjct: 418 SGHAIVAHLLPHADPVHKVTIIPRGAAGGYTMMLPTE---EQNYKTKSQLLADIRVALGG 474
Query: 509 RCAERLVFGDDVTDGGKDDLEKITKIAREMV 539
R AE L+ D+++ G DL+ +T AR MV
Sbjct: 475 RIAEALIL-DEISTGASGDLQSVTNTARAMV 504
>sp|A8F7F7|FTSH_THELT ATP-dependent zinc metalloprotease FtsH OS=Thermotoga lettingae
(strain ATCC BAA-301 / DSM 14385 / TMO) GN=ftsH PE=3
SV=1
Length = 626
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 140/409 (34%), Positives = 222/409 (54%), Gaps = 34/409 (8%)
Query: 138 RLLYKKYNQLFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYY 197
R + + NQ F + + G T +K+V + + L E ++++ +P ++
Sbjct: 132 RTISGRNNQAFTFTKSRAQMNRPGQARVT---FKDVAGVDEAVEELKETVLFLKDPGRFS 188
Query: 198 ERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD-SEKSGAARINEMFS 256
+ G + +G+LL GPPGTGKTL AR +A E+ +PF SG++F + GAAR+ ++F+
Sbjct: 189 KIGARMPKGILLVGPPGTGKTLLARAVAGEANVPFFHISGSDFVELFVGVGAARVRDLFN 248
Query: 257 IARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSLR 311
A+ NAP VF+DEIDA+ GRH R T L+ ++DG F +R
Sbjct: 249 QAKANAPCIVFIDEIDAV-GRHRGAGLGGGHDEREQTLNQLLVEMDG---------FDVR 298
Query: 312 QAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEE 371
Q ++ + ATNRPD LD +RPGR D+++ + PD + R +I +H+ K +AEDV+
Sbjct: 299 QGIVVMAATNRPDILDPALLRPGRFDKKVVLDTPDVRGREEILKIHARNKPIAEDVDIRV 358
Query: 372 LVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQK 431
L RT GF GAD+ NLVNE+ +++ R G KI+ +D + +D+ ++ G +
Sbjct: 359 LAQRTTGFVGADLENLVNEAALLAARNGRDKIKMEDFEEAIDR-VIAG---------PAR 408
Query: 432 CEQSVSFEKKRLLAVHEAGHIVLAHLFPRFD-WHAFSQLLPGGKETAISVFYPREDTIDQ 490
+ +S +KR++A HE GH +++ L P D H S + G + ++ P ED
Sbjct: 409 KSRVISPREKRIVAYHEVGHAIVSSLLPNADPVHRISIIPRGYRALGYTLQLPAEDRY-- 466
Query: 491 GYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMV 539
T L Q+ GGR AE L+F +VT G D+E+ T++AR MV
Sbjct: 467 -LVTKQELLDQITGLLGGRAAEELIF-QEVTTGAASDIERATELARRMV 513
>sp|P51327|FTSH_PORPU ATP-dependent zinc metalloprotease FtsH OS=Porphyra purpurea
GN=ftsH PE=3 SV=1
Length = 628
Score = 226 bits (577), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/416 (33%), Positives = 219/416 (52%), Gaps = 45/416 (10%)
Query: 141 YKKYNQLFDMAYAENFILP-VGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYER 199
+ K LF M + V V + K ++EVV ++ P +
Sbjct: 155 FGKSKALFQMEAKTGVVFNDVAGVEEAKEEFQEVV-------------TFLKQPESFTAV 201
Query: 200 GVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIA 258
G + +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF + GA+R+ ++F A
Sbjct: 202 GAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA 261
Query: 259 RRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQA 313
+ NAP VF+DEIDA+ GR + R T L+ ++DG + TG
Sbjct: 262 KDNAPCIVFIDEIDAV-GRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTG--------- 311
Query: 314 VIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELV 373
VI I ATNR D LD +RPGR DR++ + +PD + R+ I +VH+ K++ V+ E +
Sbjct: 312 VIVIAATNRADILDSALLRPGRFDRQVSVDVPDFRGRLAILEVHAKNKKMESKVSLETIA 371
Query: 374 FRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCE 433
RT GFSGAD+ NL+NE+ I++ R+ S + +I +D+ + G L + +
Sbjct: 372 RRTPGFSGADLANLLNEAAILTARRRKSAMTMSEIDTSIDRVVAGLEGTPLIDSKS---- 427
Query: 434 QSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYT 493
KRL+A HE GH ++ L D L+P G+ ++ F P + DQ
Sbjct: 428 -------KRLIAYHEVGHAIIGSLLEHHDPVQKVTLIPRGQARGLTWFTPSD---DQSLI 477
Query: 494 TFGYLKMQMVVAHGGRCAERLVFGD-DVTDGGKDDLEKITKIAREMVISPQNARLG 548
+ + ++V A GGR AE ++FGD +VT G +DL+++T +AR+MV +++G
Sbjct: 478 SRSQILARIVGALGGRAAEEIIFGDAEVTTGASNDLQQVTSMARQMVTRFGMSKIG 533
>sp|B9MPK5|FTSH_CALBD ATP-dependent zinc metalloprotease FtsH OS=Caldicellulosiruptor
bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320)
GN=ftsH PE=3 SV=1
Length = 616
Score = 226 bits (575), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 134/363 (36%), Positives = 213/363 (58%), Gaps = 30/363 (8%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L E++ ++ NP +Y E G + +G+LL GPPGTGKTL A+ +A E+G+PF SG++F +
Sbjct: 180 LKEVIDFLKNPRKYIELGARIPKGILLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVE 239
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQL 296
GAAR+ ++F A+RNAP VF+DEIDA+ GRH R T L+ ++
Sbjct: 240 MFVGVGAARVRDLFDQAKRNAPCVVFIDEIDAV-GRHRGAGLGGGHDEREQTLNQLLVEM 298
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG F + +I + ATNRPD LD +RPGR DR++ + +PDAK R +I V
Sbjct: 299 DG---------FGTNEGIIVMAATNRPDILDPALLRPGRFDRQIVVNVPDAKAREEILKV 349
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ K L EDV+ ++ T GF+GAD+ NL+NE+ +++ RKG +I +++ + + K
Sbjct: 350 HARNKPLGEDVDLSQIAKITAGFTGADLENLLNEAALLAARKGKRQINMEEVQEAVAK-- 407
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
VL+ E++ + + ++K+L A HEAGH ++ + P + ++P G
Sbjct: 408 -----VLMGPEKRSRV---YTEKEKKLTAYHEAGHAIVRTMIPDSEPVHEVSIIPRGYAG 459
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAR 536
+++ P+ED Y + + ++V GGR AE+LV +DV+ G D+++ TKIAR
Sbjct: 460 GYTMYLPKEDKF---YASKSDMMREIVTLLGGRVAEKLVL-EDVSTGAASDIKRATKIAR 515
Query: 537 EMV 539
+MV
Sbjct: 516 DMV 518
>sp|D0MGU8|FTSH_RHOM4 ATP-dependent zinc metalloprotease FtsH OS=Rhodothermus marinus
(strain ATCC 43812 / DSM 4252 / R-10) GN=ftsH PE=3 SV=1
Length = 697
Score = 225 bits (574), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 159/507 (31%), Positives = 265/507 (52%), Gaps = 53/507 (10%)
Query: 58 TEDLKRLYVTMKEGFPLEYVVDIPLDPYLFETIASSGAEVDLLQKRQIHYFLKVLIALLP 117
T +L R + T K P ++ + L Y A V + + ++F +L + P
Sbjct: 112 TPELIRRFTTTK---PADHDLTSFLLAYNERARAEGRPTVQFTARIEENWFGGLLTWIFP 168
Query: 118 GILILSLIRETVMLLHITSSRLLYKKYNQLFDMAYAENFILPVGYVSDTKSMYKEVVLGG 177
ILI++L V LL S +Q+ ++ +N + + D + +K+V
Sbjct: 169 LILIVAL---WVFLLRRMSPS------SQVLNIG--KNRAILYDAMGDHRVTFKDVAGLD 217
Query: 178 DVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASG 237
+ + + E++ ++ NP ++ G + +GVLL GPPGTGKTL A+ +A E+G+PF SG
Sbjct: 218 EAKEEVAEIVEFLKNPKKFTRLGGKLPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISG 277
Query: 238 AEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHAR-----KDPRRRATFEA 291
++F + GAAR+ ++F A+ AP +F+DEIDAI R + R T
Sbjct: 278 SDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDAIGRSRGRGIMMGANDERENTLNQ 337
Query: 292 LIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRV 351
L+ ++DG F+ + VI + ATNRPD LD +RPGR DR++ I PD ++R+
Sbjct: 338 LLVEMDG---------FNTDKGVIIMAATNRPDVLDPALLRPGRFDRQILIDKPDRRERL 388
Query: 352 QIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDV 411
+IF VH+ L +DV+ E L +T GF+GA+I N+ NE+ +++ RKG ++ +D
Sbjct: 389 EIFKVHTRDLILGDDVDLEVLAGQTPGFAGAEIANVCNEAALLAARKGKEAVEMEDFEQA 448
Query: 412 LDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLP 471
+D+ ++ G+ +K + +S E++ ++A HEAGH ++ D ++P
Sbjct: 449 IDR-VIAGL---------EKKNKIISPEEREIVAYHEAGHAIVGWFLRYTDPVVKVSIVP 498
Query: 472 GG-KETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEK 530
G + + P E + YT L +M +A GGR AE LVFG ++ G ++DLE+
Sbjct: 499 RGLAALGYAQYLPEERYL---YTKEALLD-RMTMAIGGRVAEELVFG-RISTGAQNDLER 553
Query: 531 ITKIAREMVISPQNARLGLAGLTRRVG 557
IT++A MV+ G++ RVG
Sbjct: 554 ITRMAYAMVVD--------YGMSERVG 572
>sp|O78516|FTSH_GUITH ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH
PE=3 SV=1
Length = 631
Score = 225 bits (574), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 213/377 (56%), Gaps = 36/377 (9%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
+E++ ++ P ++ G + +GVLL GPPGTGKTL A+ +A E+G+PF SG+EF +
Sbjct: 185 FEEVVSFLKKPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVE 244
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQL 296
GA+R+ ++F A+ N+P VF+DEIDA+ GR + R T L+ ++
Sbjct: 245 MFVGVGASRVRDLFKKAKENSPCIVFIDEIDAV-GRQRGTGIGGGNDEREQTLNQLLTEM 303
Query: 297 DGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDV 356
DG + TGI I I ATNR D LD +RPGR DR++ + +PD K R++I +V
Sbjct: 304 DGFEGNTGI---------IIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNV 354
Query: 357 HSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQL 416
H+ K+L ++ E + RT GFSGAD+ NL+NE+ I++ R+ +I +I +D+ +
Sbjct: 355 HARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQITISEIDASIDR-V 413
Query: 417 LEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKET 476
+ GM + + V + KRL+A HE GH ++ L D L+P G+
Sbjct: 414 IAGM----------EGKALVDSKTKRLIAYHEVGHAIIGTLLKHHDPVQKVTLVPRGQAK 463
Query: 477 AISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIA 535
++ F P E DQ + + +++ A GGR AE +VFG +VT G +DL+++T +A
Sbjct: 464 GLTWFTPSE---DQSLISRSQILARIMGALGGRAAEEVVFGLPEVTTGAGNDLQQVTSMA 520
Query: 536 REMVISPQNARLGLAGL 552
R+MV R G++ +
Sbjct: 521 RQMV-----TRFGMSNI 532
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 155/521 (29%), Positives = 258/521 (49%), Gaps = 68/521 (13%)
Query: 37 KLPYTYFLEKLDSSEVAAVVFTEDLKRLYVTMKEGFPLEYVVDIPLDPY-LFETIASSGA 95
++ Y+ L+ +D+ ++ + ++ V K V+ P++ L + + A
Sbjct: 33 EISYSQLLKDVDAGKIKSA----EIAGQTVLAKTADNKTLTVNAPMNSEELVNRMVAKNA 88
Query: 96 EVDLLQKRQIHYFLKVLIALLPGILILS----LIRET------VMLLHITSSRLLYKKYN 145
+V K FL +L+ LLP +L++ L+R+ M + +RLL + N
Sbjct: 89 DVKF--KSGSISFLAILVQLLPILLVVGVWLFLMRQMQGGAKGAMGFGKSKARLLTENKN 146
Query: 146 QLFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVR 205
++ +++V + + L E++ ++ +P ++ G + +
Sbjct: 147 RI---------------------TFEDVAGVDEAKEELQEVVDFLKDPAKFQRLGGKIPK 185
Query: 206 GVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPA 264
G LL GPPGTGKTL AR +A E+G+PF SG++F + GA+R+ +MF A++NAP
Sbjct: 186 GALLVGPPGTGKTLIARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPC 245
Query: 265 FVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICA 319
+F+DEIDA+ GRH + R T L+ ++DG F + +I I A
Sbjct: 246 IIFIDEIDAV-GRHRGAGLGGGNDEREQTLNQLLVEMDG---------FEANEGIILIAA 295
Query: 320 TNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGF 379
TNRPD LD +RPGR DR++ + PD R +I VH LA DV+ + L T GF
Sbjct: 296 TNRPDVLDPALLRPGRFDRQVVVPNPDVAGREKIIRVHMKNVPLAADVDVKTLARGTPGF 355
Query: 380 SGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFE 439
SGAD+ NLVNE+ +M+ RK + QD DK + MG ++ +++ E
Sbjct: 356 SGADLANLVNEAALMAARKNRRMVTMQDFEQAKDKVM---MGA-------ERRSMAMNEE 405
Query: 440 KKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLK 499
+K+L A HE GH ++A P D + ++P G+ + + P D Y +
Sbjct: 406 EKKLTAYHEGGHAIVALNVPLADPVHKATIVPRGRALGMVMQLPEGDRYSMKYQ---QMT 462
Query: 500 MQMVVAHGGRCAERLVFG-DDVTDGGKDDLEKITKIAREMV 539
++ + GGR AE ++FG +++T G D++ T +AR MV
Sbjct: 463 SRLAIMMGGRVAEEIIFGKENITSGASSDIKAATDLARNMV 503
>sp|B2UMY1|FTSH_AKKM8 ATP-dependent zinc metalloprotease FtsH OS=Akkermansia muciniphila
(strain ATCC BAA-835) GN=ftsH PE=3 SV=1
Length = 812
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 244/465 (52%), Gaps = 49/465 (10%)
Query: 102 KRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYKKYNQLFDMAYAENFILPVG 161
KR+ + +L+ LLP +LIL V+L + ++ + F + A I P
Sbjct: 235 KRESGSWGGILLNLLPIVLIL------VILFFMFRAQSGGARGAMSFGKSRA-RLISP-- 285
Query: 162 YVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFA 221
K +K+V + + + EL+ ++ NP ++ + G RGVL+ G PGTGKTL A
Sbjct: 286 --DKNKVTFKDVAGISEAKEEVWELVEFLRNPEKFRDLGATIPRGVLMVGAPGTGKTLLA 343
Query: 222 RTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-- 278
R +A ES F SG++F + GA+R+ +MF A+R AP+ +F+DEIDA+ GR
Sbjct: 344 RAIAGESNASFYSISGSDFVEMFVGVGASRVRDMFEQAKRTAPSLIFIDEIDAV-GRQRG 402
Query: 279 ---ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGR 335
+ R T AL+ ++DG F VI I ATNR D LD +RPGR
Sbjct: 403 YGMGGGNDEREQTLNALLVEMDG---------FENNSNVIVIAATNRADILDPALLRPGR 453
Query: 336 IDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMS 395
DR++ + LPD + R QI VH+ ++A V+FE + T GFSGA + NLVNE+ +++
Sbjct: 454 FDRQVVVNLPDVRGREQILQVHARKVKMAPGVSFERIARGTSGFSGAQLANLVNEAALLA 513
Query: 396 VRKGHSKIQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLA 455
RKG +I + ++ + DK +++ +++ +R+ AVHEAGH +
Sbjct: 514 ARKGLKEITEAELEEARDK----------VSWGRERRSLAINERGRRITAVHEAGHAICL 563
Query: 456 HLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLV 515
P + ++P G ++++ P +D + Q + + Q+VVA GGRCAE++V
Sbjct: 564 LKTPHSEPLHRVTIVPRGGALGMTMWLPSDDKMHQLRSE---MLDQLVVAMGGRCAEQIV 620
Query: 516 FGDDVTDGGKDDLEKITKIAREMVISPQNARLGLAGLTRRVGLLD 560
FG DVT G D++ T +AR MV G++ ++GL++
Sbjct: 621 FG-DVTSGATGDIKSATNLARRMVCE--------FGMSEKLGLIE 656
>sp|Q6MLS7|FTSH1_BDEBA ATP-dependent zinc metalloprotease FtsH 1 OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=ftsH1 PE=3 SV=1
Length = 645
Score = 224 bits (572), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 169/568 (29%), Positives = 268/568 (47%), Gaps = 87/568 (15%)
Query: 19 TQGTRALWI-------------AKRWWRYRPKLPYTYFLEKLDSSEVAAVVFTEDLKRLY 65
TQ T ALW + + ++ F E + + EVA V F +D +
Sbjct: 4 TQKTLALWFFLIIMAVFLFQAYESKQQKAIADFNFSKFTEAVKAGEVATVTFRQDTSEVV 63
Query: 66 VTMKEGFPLEY-------VVDIPLDPYLFETIASSGAEVDLLQKRQIHYFLKVLIALLPG 118
MK F +Y V + + Y F + G + + +F +L+ LP
Sbjct: 64 GEMKPEFEKKYNGTHFSIVGNTQDEGYKF--LQQHGITPNYERADNGGFFQSLLVNWLPL 121
Query: 119 ILILSL----IRE------TVMLLHITSSRLLYKKYNQLFDMAYAENFILPVGYVSDTKS 168
ILI+++ +R+ M + +RLL + N++
Sbjct: 122 ILIVAMFLFIMRQIQAGGGKAMSFGKSRARLLTEHKNRV--------------------- 160
Query: 169 MYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKES 228
+KEV + + L E++ ++ +P +Y + G + +GVLL G PGTGKTL AR +A E+
Sbjct: 161 TFKEVAGVDEAKEDLQEIVSFLKDPKKYTKLGGRIPKGVLLVGSPGTGKTLLARAVAGEA 220
Query: 229 GLPFVFASGAEFTDS-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRH-----ARKD 282
G+PF SG++F + GA+R+ ++F ++NAP +F+DEIDA+ GRH
Sbjct: 221 GVPFFTISGSDFVEMFVGVGASRVRDLFEQGKKNAPCLIFIDEIDAV-GRHRGAGMGGGH 279
Query: 283 PRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYI 342
R T L+ ++DG F + VI I ATNRPD LD +RPGR DRR+ +
Sbjct: 280 DEREQTLNQLLVEMDG---------FESSEGVIMIAATNRPDVLDPALLRPGRFDRRVIV 330
Query: 343 GLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSK 402
PD K R QI VH L DV+ ++ T GFSGAD+ NLVNE+ +++ R
Sbjct: 331 NKPDLKGREQILAVHMRKTPLGPDVDASKIARGTPGFSGADLENLVNEAALVAARSDKKY 390
Query: 403 IQQQDIVDVLDKQLLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFD 462
++ +D DK V + E + +S E K++ A HEAGH ++ D
Sbjct: 391 LEMEDFEKAKDK-------VTMGAERRSMV---ISDEDKKVTAYHEAGHTLVGKKLVGLD 440
Query: 463 WHAFSQLLPGGKETAISVFYPREDTIDQGYTTFGYLKMQMVVA--HGGRCAERLVFGDDV 520
++P G ++ P ++++ + K + ++A GGR AE L+F D+
Sbjct: 441 PIHKVTIIPRGMALGVTQTLPEKESV-----SLSKSKAENMIAFLFGGRAAEELIF-KDI 494
Query: 521 TDGGKDDLEKITKIAREMVISPQNARLG 548
T G +D+E+ T+IAR MV ++LG
Sbjct: 495 TTGAGNDIERATEIARRMVCEWGMSKLG 522
>sp|D1C4U5|FTSH3_SPHTD ATP-dependent zinc metalloprotease FtsH 3 OS=Sphaerobacter
thermophilus (strain DSM 20745 / S 6022) GN=ftsH3 PE=3
SV=1
Length = 489
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/360 (36%), Positives = 205/360 (56%), Gaps = 22/360 (6%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L E++ ++ +P ++ G + RGVLL+GPPGTGKTL AR +A E+G+PF S ++F +
Sbjct: 67 LAEIVTFLRDPERFRRMGARMPRGVLLAGPPGTGKTLLARAVAGEAGVPFFAMSASQFVE 126
Query: 243 SEKS-GAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKE 301
GA R+ ++F+ AR+ +PA VF+DEIDAI R R D + +E + Q+
Sbjct: 127 VYVGVGAKRVRDLFAAARKASPAIVFIDEIDAIGRR--RGDSQSHQEYEQTLNQV----- 179
Query: 302 RTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGK 361
+D F RQAV+ I ATNR D LD +RPGR DRR+ + LPD +R I VH+ K
Sbjct: 180 LVELDGFHPRQAVVVIAATNRSDILDPALLRPGRFDRRVELSLPDRAERAAILRVHAQDK 239
Query: 362 QLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLLEGMG 421
LA DV+ + L RTVG SGAD+ N +NE+ ++++R+G +I Q D+ + +D+ ++ G
Sbjct: 240 PLAPDVDLDALAARTVGLSGADLENTLNEAALLALRRGGDEITQADLEEAVDR-VIAG-- 296
Query: 422 VLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVF 481
+ +++S ++ +AVHEAGH ++AH D +L G+ +V
Sbjct: 297 -------PSRRSRALSARERETIAVHEAGHALVAHQLASADAPRRVTILGRGQMGGATVL 349
Query: 482 YPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVIS 541
P E D+ T G ++ V GG AE +G +VT G DL + + +A+ MV +
Sbjct: 350 APDE---DRRLWTRGQFLDRLAVLLGGYAAEEYRYG-EVTTGSSGDLSQASALAQAMVTT 405
>sp|D3EZK2|FTSH3_CONWI ATP-dependent zinc metalloprotease FtsH 3 OS=Conexibacter woesei
(strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
GN=ftsH3 PE=3 SV=1
Length = 749
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/396 (35%), Positives = 214/396 (54%), Gaps = 40/396 (10%)
Query: 183 LDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTD 242
L+E++ ++ NP +Y G + +GVLLSG PGTGKTL AR +A E+G+PF S +EF +
Sbjct: 253 LNEIVDFLKNPQKYQRLGGKIPKGVLLSGQPGTGKTLLARAVAGEAGVPFFSMSASEFVE 312
Query: 243 S-EKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARK------DPRRRATFEALIAQ 295
GA+R+ ++F A+ APA +F+DE+DAI + R T ++ +
Sbjct: 313 MIVGVGASRVRDLFRQAKEAAPAIIFIDELDAIGRARGGGRGSFGGNDEREQTLNQILTE 372
Query: 296 LDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFD 355
+DG F AVI I ATNRP+ LD +RPGR DRR+ + PD R+ I
Sbjct: 373 MDG---------FEPTTAVIVIAATNRPEILDAALLRPGRFDRRVTVAAPDRNGRLMILK 423
Query: 356 VHSAGKQLAEDVNFEELVFRTVGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQ 415
VH+ LA+DV+ E + T G GAD+ NLVNE+ +++ R+GH K+ D+ D L+K
Sbjct: 424 VHTRSVPLADDVDLESIASSTPGMVGADLANLVNEAALLAARRGHVKVTNSDVADALEK- 482
Query: 416 LLEGMGVLLTEEEQQKCEQSVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKE 475
V+L E + +S + +R A HE+GH ++ L D ++P G+
Sbjct: 483 ------VVLGAERKVM----MSDDDRRRTAYHESGHAIVGMLTAGADPVRKVSIIPRGQA 532
Query: 476 TAISVFYPREDTIDQGYTTFGYLKMQMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIA 535
++ P D + YL ++ VA GGR AE +VFG D+T G + D++++T IA
Sbjct: 533 LGVTFSSPDADKYNYDER---YLVGKIKVALGGRVAEEIVFG-DLTTGAESDIQQLTGIA 588
Query: 536 REMVISPQNARLGLAGLTRRVGLLD-RPDSSDGDLI 570
R+MV G G++R +G + P +G L+
Sbjct: 589 RQMV--------GRWGMSRAIGPIAVLPSEGNGPLL 616
>sp|Q1D491|FTSH_MYXXD ATP-dependent zinc metalloprotease FtsH OS=Myxococcus xanthus
(strain DK 1622) GN=ftsH PE=3 SV=1
Length = 638
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 146/469 (31%), Positives = 239/469 (50%), Gaps = 51/469 (10%)
Query: 83 DPYLFETIASSGAEVDLLQKRQIHYFLKVLIALLPGILILSLIRETVMLLHITSSRLLYK 142
D + + S+G +V ++ Q +L +L +P + + + L S + +
Sbjct: 78 DAAMLNQLRSNGVDVKYEREEQNSLWLTILGQWMPVVFLFLFFIFFMRQLQGGSGKAMTF 137
Query: 143 KYNQLFDMAYAENFILPVGYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQ 202
++ ++ + N K + +V + + L+E++ ++ +P ++ + G +
Sbjct: 138 GKSKAKLLSESHN-----------KVTFADVAGADECKEELEEIVAFLKDPKKFTKLGGR 186
Query: 203 FVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDS-EKSGAARINEMFSIARRN 261
+GVL+ G PGTGKTL AR +A E+G+PF SG++F + GA+R+ ++F ++N
Sbjct: 187 IPKGVLMMGSPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKN 246
Query: 262 APAFVFVDEIDAIAGRH-----ARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIF 316
AP +F+DEIDA+ GRH R T L+ ++DG F VI
Sbjct: 247 APCIIFIDEIDAV-GRHRGAGLGGGHDEREQTLNQLLVEMDG---------FESNDGVIL 296
Query: 317 ICATNRPDELDLEFVRPGRIDRRLYIGLPDAKQRVQIFDVHSAGKQLAEDVNFEELVFRT 376
I ATNRPD LD RPGR DRR+ + PD K R+ + VH+ LA +V+ E + T
Sbjct: 297 IAATNRPDVLDPALQRPGRFDRRIVVPRPDVKGRLGVLKVHTRRVPLAPEVDLEVIARGT 356
Query: 377 VGFSGADIRNLVNESGIMSVRKGHSKIQQQDIVDVLDKQLL--EGMGVLLTEEEQQKCEQ 434
G +GAD+ NLVNES +M+ R+ ++ D DK + E +++TE+E
Sbjct: 357 PGMTGADLENLVNESALMAARQNKERVDLSDFEAAKDKVFMGPERRSMIMTEKE------ 410
Query: 435 SVSFEKKRLLAVHEAGHIVLAHLFPRFDWHAFSQLLPGGKETAISVFYPREDTIDQGYTT 494
K+ AVHEAGH +LA L P D ++P G+ ++ P ED ++
Sbjct: 411 ------KKNTAVHEAGHALLAKLLPGCDPLHKVTIIPRGQALGVTWSLPTEDKVN----- 459
Query: 495 FGYLKM---QMVVAHGGRCAERLVFGDDVTDGGKDDLEKITKIAREMVI 540
GY K Q+ +A GGR AE L+F ++++ G +D+E+ T+ AR MV
Sbjct: 460 -GYKKQMLDQISMAMGGRIAEELMF-NEMSSGAANDIERATETARAMVC 506
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 226,911,296
Number of Sequences: 539616
Number of extensions: 10027636
Number of successful extensions: 34808
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1950
Number of HSP's successfully gapped in prelim test: 417
Number of HSP's that attempted gapping in prelim test: 30217
Number of HSP's gapped (non-prelim): 3057
length of query: 612
length of database: 191,569,459
effective HSP length: 123
effective length of query: 489
effective length of database: 125,196,691
effective search space: 61221181899
effective search space used: 61221181899
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)