Query 007218
Match_columns 612
No_of_seqs 458 out of 2697
Neff 7.4
Searched_HMMs 46136
Date Thu Mar 28 20:34:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007218.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007218hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 2.1E-77 4.5E-82 628.8 38.3 399 166-607 42-452 (452)
2 PLN02533 probable purple acid 100.0 6.9E-70 1.5E-74 590.2 43.0 379 164-601 39-426 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 2.2E-47 4.8E-52 397.0 31.7 282 285-592 3-294 (294)
4 PTZ00422 glideosome-associated 100.0 1.2E-33 2.6E-38 298.1 27.8 271 285-598 25-335 (394)
5 cd07378 MPP_ACP5 Homo sapiens 100.0 4.2E-31 9.1E-36 272.5 23.9 247 287-582 1-277 (277)
6 cd07395 MPP_CSTP1 Homo sapiens 99.9 1.1E-26 2.5E-31 237.8 21.8 239 286-577 4-260 (262)
7 KOG2679 Purple (tartrate-resis 99.9 5.1E-26 1.1E-30 222.6 17.8 259 283-593 40-330 (336)
8 PF09423 PhoD: PhoD-like phosp 99.9 4.5E-22 9.8E-27 219.4 26.6 310 237-576 60-453 (453)
9 cd07402 MPP_GpdQ Enterobacter 99.9 1.2E-22 2.6E-27 204.9 20.1 228 288-568 1-237 (240)
10 cd07396 MPP_Nbla03831 Homo sap 99.9 1E-21 2.2E-26 201.9 20.7 205 287-539 1-246 (267)
11 COG3540 PhoD Phosphodiesterase 99.9 2.1E-21 4.6E-26 203.8 16.5 299 170-504 39-419 (522)
12 PRK11148 cyclic 3',5'-adenosin 99.9 7.7E-20 1.7E-24 188.7 24.5 247 275-578 5-260 (275)
13 cd07401 MPP_TMEM62_N Homo sapi 99.8 2E-19 4.3E-24 183.7 18.7 195 289-509 2-216 (256)
14 cd07399 MPP_YvnB Bacillus subt 99.8 9.2E-19 2E-23 174.1 15.0 159 287-507 1-165 (214)
15 cd00842 MPP_ASMase acid sphing 99.7 1.9E-15 4.2E-20 157.6 16.7 181 315-507 57-265 (296)
16 PF00149 Metallophos: Calcineu 99.6 3.5E-16 7.5E-21 145.4 9.2 195 287-503 1-200 (200)
17 cd08163 MPP_Cdc1 Saccharomyces 99.6 2.3E-15 5E-20 153.5 15.7 161 325-506 44-231 (257)
18 cd07383 MPP_Dcr2 Saccharomyces 99.6 3.9E-15 8.5E-20 146.3 16.0 166 286-507 2-180 (199)
19 cd07393 MPP_DR1119 Deinococcus 99.6 8.8E-15 1.9E-19 147.4 15.7 201 289-537 1-226 (232)
20 TIGR03767 P_acnes_RR metalloph 99.6 1.3E-13 2.8E-18 148.5 24.1 96 405-506 290-395 (496)
21 PF14008 Metallophos_C: Iron/z 99.5 1.5E-14 3.3E-19 114.8 7.1 62 527-588 1-62 (62)
22 cd07392 MPP_PAE1087 Pyrobaculu 99.5 5.4E-13 1.2E-17 128.9 16.7 168 289-504 1-174 (188)
23 TIGR03768 RPA4764 metallophosp 99.4 3.7E-12 8E-17 136.0 18.5 97 405-503 291-411 (492)
24 COG1409 Icc Predicted phosphoh 99.4 3E-12 6.5E-17 132.3 17.5 184 287-503 1-193 (301)
25 cd07385 MPP_YkuE_C Bacillus su 99.4 2E-12 4.2E-17 129.0 14.7 172 287-512 2-175 (223)
26 TIGR03729 acc_ester putative p 99.4 5.1E-12 1.1E-16 127.9 17.6 185 288-504 1-222 (239)
27 cd07400 MPP_YydB Bacillus subt 99.4 2.7E-12 5.8E-17 119.2 12.8 125 289-506 1-128 (144)
28 cd07388 MPP_Tt1561 Thermus the 99.3 5.4E-11 1.2E-15 118.7 17.7 175 286-501 4-189 (224)
29 cd00840 MPP_Mre11_N Mre11 nucl 99.3 2.3E-11 5.1E-16 120.8 13.5 197 288-506 1-204 (223)
30 cd07404 MPP_MS158 Microscilla 99.3 1.3E-11 2.8E-16 117.6 10.6 149 289-504 1-150 (166)
31 PRK11340 phosphodiesterase Yae 99.2 1.9E-10 4E-15 118.7 16.0 170 285-511 48-222 (271)
32 PF12850 Metallophos_2: Calcin 99.1 9E-10 2E-14 103.0 13.5 152 287-566 1-153 (156)
33 KOG1432 Predicted DNA repair e 99.1 8.5E-09 1.8E-13 105.6 19.0 88 284-372 51-147 (379)
34 cd00838 MPP_superfamily metall 99.1 2E-09 4.3E-14 96.2 12.5 96 324-507 24-119 (131)
35 COG1408 Predicted phosphohydro 99.0 5.9E-09 1.3E-13 107.7 12.9 78 284-373 42-119 (284)
36 cd00841 MPP_YfcE Escherichia c 98.9 1.5E-08 3.2E-13 95.3 12.4 59 288-372 1-59 (155)
37 cd07379 MPP_239FB Homo sapiens 98.8 2.4E-08 5.1E-13 91.9 10.4 117 288-504 1-117 (135)
38 cd07397 MPP_DevT Myxococcus xa 98.7 1.5E-07 3.1E-12 94.5 14.0 64 287-373 1-64 (238)
39 PRK05340 UDP-2,3-diacylglucosa 98.7 4.5E-08 9.7E-13 99.2 10.2 182 287-505 1-201 (241)
40 cd07394 MPP_Vps29 Homo sapiens 98.7 1.8E-06 3.8E-11 83.6 20.4 65 288-372 1-65 (178)
41 cd08166 MPP_Cdc1_like_1 unchar 98.7 4.3E-08 9.3E-13 95.3 8.7 48 325-372 41-93 (195)
42 TIGR00040 yfcE phosphoesterase 98.7 3.6E-07 7.7E-12 86.4 14.8 63 287-371 1-63 (158)
43 COG1768 Predicted phosphohydro 98.7 2E-07 4.3E-12 87.3 12.1 183 288-507 2-203 (230)
44 COG2129 Predicted phosphoester 98.6 2.6E-06 5.5E-11 83.6 18.9 177 286-504 3-188 (226)
45 cd08165 MPP_MPPE1 human MPPE1 98.6 4E-07 8.7E-12 86.1 11.8 56 316-372 29-89 (156)
46 cd07403 MPP_TTHA0053 Thermus t 98.6 2.3E-07 4.9E-12 84.9 9.0 50 451-506 57-106 (129)
47 cd07389 MPP_PhoD Bacillus subt 98.6 1.5E-07 3.2E-12 94.3 8.5 163 288-506 1-207 (228)
48 PF14582 Metallophos_3: Metall 98.6 1.8E-07 3.8E-12 91.4 8.4 180 287-507 6-222 (255)
49 TIGR00583 mre11 DNA repair pro 98.6 1.4E-06 3E-11 94.4 16.2 52 286-340 3-56 (405)
50 cd07384 MPP_Cdc1_like Saccharo 98.5 2.9E-07 6.2E-12 88.5 8.2 57 315-372 35-100 (171)
51 TIGR01854 lipid_A_lpxH UDP-2,3 98.5 2.3E-06 5E-11 86.2 13.8 74 290-372 2-81 (231)
52 PRK09453 phosphodiesterase; Pr 98.5 1.4E-05 3E-10 77.4 18.3 71 287-372 1-76 (182)
53 KOG3770 Acid sphingomyelinase 98.4 1.6E-06 3.5E-11 95.3 12.5 176 316-506 200-407 (577)
54 cd07410 MPP_CpdB_N Escherichia 98.3 2.4E-05 5.3E-10 80.9 18.3 198 287-504 1-231 (277)
55 cd08164 MPP_Ted1 Saccharomyces 98.3 1.8E-06 4E-11 83.9 9.0 49 324-373 42-112 (193)
56 cd00845 MPP_UshA_N_like Escher 98.3 5.5E-06 1.2E-10 84.3 12.0 185 287-505 1-208 (252)
57 cd07406 MPP_CG11883_N Drosophi 98.3 1E-05 2.2E-10 82.8 13.1 185 287-504 1-208 (257)
58 cd07382 MPP_DR1281 Deinococcus 98.3 5.1E-05 1.1E-09 77.4 17.9 195 288-540 1-201 (255)
59 cd07398 MPP_YbbF-LpxH Escheric 98.2 4.1E-06 8.8E-11 83.0 9.1 74 290-372 1-82 (217)
60 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.2 3.4E-05 7.4E-10 79.0 14.9 191 289-509 1-235 (262)
61 TIGR00282 metallophosphoestera 98.1 0.00012 2.6E-09 74.9 17.2 198 287-540 1-204 (266)
62 cd07412 MPP_YhcR_N Bacillus su 98.0 0.00027 5.8E-09 73.7 16.9 82 287-373 1-89 (288)
63 cd07411 MPP_SoxB_N Thermus the 97.9 9.7E-05 2.1E-09 76.0 12.4 189 287-503 1-219 (264)
64 cd07425 MPP_Shelphs Shewanella 97.9 2.1E-05 4.5E-10 78.0 7.1 65 290-372 1-80 (208)
65 cd07409 MPP_CD73_N CD73 ecto-5 97.8 0.00036 7.8E-09 72.4 14.7 78 407-504 131-219 (281)
66 TIGR00619 sbcd exonuclease Sbc 97.8 3.3E-05 7.2E-10 78.9 6.5 83 287-372 1-88 (253)
67 cd07405 MPP_UshA_N Escherichia 97.8 0.00031 6.7E-09 73.1 13.4 51 447-504 172-222 (285)
68 COG0420 SbcD DNA repair exonuc 97.8 4.2E-05 9E-10 83.2 6.8 83 287-372 1-88 (390)
69 cd07408 MPP_SA0022_N Staphyloc 97.8 0.00029 6.4E-09 72.1 12.6 78 287-373 1-83 (257)
70 COG0622 Predicted phosphoester 97.7 0.0013 2.9E-08 63.0 15.2 64 287-372 2-65 (172)
71 KOG3662 Cell division control 97.7 0.00022 4.7E-09 76.4 10.6 124 284-425 46-182 (410)
72 cd07407 MPP_YHR202W_N Saccharo 97.7 0.0005 1.1E-08 71.4 13.2 81 407-503 137-231 (282)
73 PHA02546 47 endonuclease subun 97.6 9.6E-05 2.1E-09 78.9 6.8 83 287-372 1-89 (340)
74 PRK10966 exonuclease subunit S 97.6 0.0001 2.2E-09 80.4 7.1 82 287-372 1-87 (407)
75 PRK09419 bifunctional 2',3'-cy 97.6 0.00075 1.6E-08 83.2 14.7 194 283-504 657-883 (1163)
76 cd07380 MPP_CWF19_N Schizosacc 97.6 0.00025 5.5E-09 66.5 8.0 54 315-370 15-68 (150)
77 PRK09558 ushA bifunctional UDP 97.5 0.0011 2.3E-08 75.5 13.9 199 285-504 33-258 (551)
78 COG2908 Uncharacterized protei 97.5 0.00055 1.2E-08 68.1 9.3 72 291-372 2-80 (237)
79 COG0737 UshA 5'-nucleotidase/2 97.4 0.0011 2.4E-08 74.9 12.2 204 282-503 22-247 (517)
80 TIGR01530 nadN NAD pyrophospha 97.1 0.0085 1.8E-07 68.1 15.3 79 406-504 129-219 (550)
81 PRK00166 apaH diadenosine tetr 97.1 0.0012 2.7E-08 68.1 7.1 65 288-372 2-69 (275)
82 cd08162 MPP_PhoA_N Synechococc 97.0 0.0069 1.5E-07 63.9 12.5 39 447-504 206-245 (313)
83 cd07423 MPP_PrpE Bacillus subt 97.0 0.0013 2.9E-08 66.3 6.6 67 288-372 2-80 (234)
84 cd07391 MPP_PF1019 Pyrococcus 97.0 0.0012 2.5E-08 63.4 5.8 54 317-372 33-88 (172)
85 PHA02239 putative protein phos 97.0 0.0013 2.8E-08 66.5 6.2 68 287-372 1-73 (235)
86 TIGR00024 SbcD_rel_arch putati 96.9 0.0014 3.1E-08 65.7 5.8 84 287-372 15-102 (225)
87 cd07386 MPP_DNA_pol_II_small_a 96.9 0.0018 3.9E-08 65.7 6.1 76 290-372 2-94 (243)
88 PRK13625 bis(5'-nucleosyl)-tet 96.8 0.0023 5E-08 65.1 6.8 66 288-371 2-78 (245)
89 cd07424 MPP_PrpA_PrpB PrpA and 96.8 0.0028 6.1E-08 62.6 7.1 63 288-372 2-67 (207)
90 PRK04036 DNA polymerase II sma 96.7 0.0037 8.1E-08 70.2 7.8 82 284-372 241-343 (504)
91 cd07390 MPP_AQ1575 Aquifex aeo 96.7 0.0026 5.6E-08 60.8 5.6 49 318-372 34-82 (168)
92 cd07413 MPP_PA3087 Pseudomonas 96.6 0.004 8.8E-08 62.4 6.8 66 289-372 1-76 (222)
93 COG1692 Calcineurin-like phosp 96.6 0.063 1.4E-06 53.6 14.2 198 287-539 1-202 (266)
94 PRK11439 pphA serine/threonine 96.6 0.0051 1.1E-07 61.4 6.8 63 288-372 18-83 (218)
95 PRK09968 serine/threonine-spec 96.5 0.0061 1.3E-07 60.9 6.9 62 288-371 16-80 (218)
96 PRK09419 bifunctional 2',3'-cy 96.4 0.02 4.3E-07 70.9 12.0 48 447-504 233-281 (1163)
97 PRK11907 bifunctional 2',3'-cy 96.4 0.052 1.1E-06 64.0 14.7 62 277-339 106-172 (814)
98 PRK09418 bifunctional 2',3'-cy 96.4 0.093 2E-06 61.8 16.5 53 286-339 39-96 (780)
99 cd07387 MPP_PolD2_C PolD2 (DNA 96.4 0.074 1.6E-06 54.4 13.9 180 289-506 2-218 (257)
100 cd07422 MPP_ApaH Escherichia c 96.3 0.009 1.9E-07 61.2 6.8 63 290-372 2-67 (257)
101 PF13277 YmdB: YmdB-like prote 96.2 0.068 1.5E-06 54.0 12.5 171 325-540 26-199 (253)
102 COG4186 Predicted phosphoester 96.2 0.08 1.7E-06 49.3 11.8 80 288-372 5-86 (186)
103 cd07421 MPP_Rhilphs Rhilph pho 95.8 0.026 5.6E-07 58.5 7.5 67 288-372 3-80 (304)
104 PF00041 fn3: Fibronectin type 95.7 0.023 5.1E-07 46.5 5.7 74 168-262 2-77 (85)
105 cd07381 MPP_CapA CapA and rela 95.7 0.34 7.3E-06 48.9 15.1 88 408-506 123-222 (239)
106 cd00144 MPP_PPP_family phospho 95.7 0.026 5.6E-07 56.1 6.8 65 290-372 1-68 (225)
107 PRK09420 cpdB bifunctional 2', 95.6 0.13 2.7E-06 59.8 13.1 46 447-503 217-263 (649)
108 TIGR00668 apaH bis(5'-nucleosy 95.5 0.028 6E-07 58.0 6.4 64 288-371 2-68 (279)
109 TIGR01390 CycNucDiestase 2',3' 95.4 0.16 3.5E-06 58.7 13.0 46 447-503 194-240 (626)
110 KOG2863 RNA lariat debranching 95.1 0.11 2.4E-06 54.4 9.2 177 287-502 1-229 (456)
111 COG5555 Cytolysin, a secreted 95.1 0.028 6.2E-07 56.9 4.8 173 328-504 128-335 (392)
112 COG1407 Predicted ICC-like pho 94.6 0.078 1.7E-06 53.1 6.6 84 287-372 20-110 (235)
113 cd07420 MPP_RdgC Drosophila me 94.6 0.072 1.6E-06 56.2 6.6 67 288-372 52-123 (321)
114 cd07416 MPP_PP2B PP2B, metallo 93.4 0.17 3.8E-06 53.1 6.7 67 288-372 44-114 (305)
115 KOG4221 Receptor mediating net 93.3 1.8 4E-05 52.1 15.2 130 126-278 571-711 (1381)
116 cd07418 MPP_PP7 PP7, metalloph 93.2 0.18 4E-06 54.3 6.6 67 288-372 67-138 (377)
117 KOG2310 DNA repair exonuclease 93.0 0.15 3.3E-06 56.1 5.5 54 285-341 12-67 (646)
118 KOG0196 Tyrosine kinase, EPH ( 92.9 1.1 2.4E-05 51.9 12.2 95 165-280 439-537 (996)
119 smart00156 PP2Ac Protein phosp 92.6 0.34 7.4E-06 50.0 7.3 67 288-372 29-99 (271)
120 cd07415 MPP_PP2A_PP4_PP6 PP2A, 92.2 0.3 6.4E-06 50.9 6.3 67 288-372 43-113 (285)
121 cd00063 FN3 Fibronectin type 3 91.8 1.3 2.7E-05 35.5 8.6 37 239-275 55-91 (93)
122 cd07414 MPP_PP1_PPKL PP1, PPKL 91.7 0.37 7.9E-06 50.4 6.4 25 478-502 220-244 (293)
123 cd07419 MPP_Bsu1_C Arabidopsis 91.3 0.48 1E-05 50.0 6.8 23 478-500 240-262 (311)
124 KOG3513 Neural cell adhesion m 91.0 12 0.00025 45.3 18.3 193 49-281 718-917 (1051)
125 PTZ00239 serine/threonine prot 91.0 0.52 1.1E-05 49.5 6.7 66 289-372 45-114 (303)
126 KOG3325 Membrane coat complex 90.9 2.1 4.6E-05 39.7 9.6 85 481-592 97-182 (183)
127 COG1311 HYS2 Archaeal DNA poly 90.9 0.64 1.4E-05 51.0 7.4 78 285-372 224-321 (481)
128 cd07417 MPP_PP5_C PP5, C-termi 90.8 0.59 1.3E-05 49.4 6.9 25 478-502 231-255 (316)
129 PTZ00480 serine/threonine-prot 90.1 0.79 1.7E-05 48.4 7.1 25 478-502 229-253 (320)
130 PTZ00244 serine/threonine-prot 89.9 0.62 1.3E-05 48.7 6.1 25 478-502 222-246 (294)
131 PF07888 CALCOCO1: Calcium bin 87.8 3.5 7.7E-05 46.3 10.4 93 64-178 22-124 (546)
132 PF09587 PGA_cap: Bacterial ca 87.4 1.6 3.4E-05 44.4 7.1 64 433-507 169-232 (250)
133 KOG4419 5' nucleotidase [Nucle 85.5 2.9 6.3E-05 47.0 8.2 56 431-503 211-269 (602)
134 smart00854 PGA_cap Bacterial c 84.3 2.4 5.2E-05 42.8 6.5 59 437-506 162-220 (239)
135 smart00060 FN3 Fibronectin typ 82.3 8.4 0.00018 29.5 7.8 22 240-261 56-77 (83)
136 KOG3947 Phosphoesterases [Gene 81.4 3.1 6.6E-05 42.6 5.7 65 285-373 60-127 (305)
137 PF04042 DNA_pol_E_B: DNA poly 78.4 3.4 7.4E-05 40.5 5.1 74 289-372 1-91 (209)
138 KOG4221 Receptor mediating net 70.2 98 0.0021 38.2 14.8 126 124-278 479-611 (1381)
139 PTZ00235 DNA polymerase epsilo 66.1 21 0.00045 37.2 7.4 76 286-372 27-122 (291)
140 PF10179 DUF2369: Uncharacteri 64.9 1.4E+02 0.003 31.4 13.2 19 243-261 262-280 (300)
141 KOG0372 Serine/threonine speci 49.7 42 0.00091 34.0 6.1 67 289-372 45-114 (303)
142 KOG0374 Serine/threonine speci 46.1 26 0.00056 37.3 4.4 24 479-502 232-255 (331)
143 KOG2476 Uncharacterized conser 44.4 38 0.00082 37.3 5.2 70 287-369 6-75 (528)
144 PF09294 Interfer-bind: Interf 37.7 46 0.00099 28.5 4.0 36 242-277 68-105 (106)
145 KOG3513 Neural cell adhesion m 36.3 3E+02 0.0065 33.8 11.4 112 127-261 577-694 (1051)
146 PF10179 DUF2369: Uncharacteri 32.3 1.5E+02 0.0031 31.2 7.2 20 242-261 16-35 (300)
147 cd02856 Glycogen_debranching_e 29.4 73 0.0016 27.4 3.9 24 237-260 43-66 (103)
148 TIGR02855 spore_yabG sporulati 28.3 46 0.001 34.2 2.7 50 435-502 115-165 (283)
149 KOG0371 Serine/threonine prote 27.8 1.3E+02 0.0028 30.9 5.6 66 289-372 62-131 (319)
150 cd01987 USP_OKCHK USP domain i 27.6 3.1E+02 0.0067 23.6 7.8 23 480-502 74-96 (124)
151 PF06874 FBPase_2: Firmicute f 27.1 45 0.00098 38.2 2.6 50 317-373 176-225 (640)
152 TIGR02039 CysD sulfate adenyly 26.0 2.4E+02 0.0051 29.6 7.5 81 416-502 50-130 (294)
153 PF05582 Peptidase_U57: YabG p 25.1 58 0.0013 33.7 2.7 23 480-502 143-166 (287)
154 KOG0373 Serine/threonine speci 24.7 63 0.0014 32.2 2.8 65 289-372 48-117 (306)
155 cd02853 MTHase_N_term Maltooli 24.7 98 0.0021 25.6 3.7 20 239-259 40-59 (85)
156 cd02852 Isoamylase_N_term Isoa 24.6 89 0.0019 27.6 3.6 23 238-260 48-70 (119)
157 cd02860 Pullulanase_N_term Pul 24.6 95 0.0021 26.5 3.7 24 237-260 45-68 (100)
158 PF07353 Uroplakin_II: Uroplak 22.4 1.1E+02 0.0024 28.9 3.7 18 244-261 105-122 (184)
159 COG2248 Predicted hydrolase (m 22.0 1.8E+02 0.0038 29.9 5.4 73 286-373 176-251 (304)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-77 Score=628.76 Aligned_cols=399 Identities=41% Similarity=0.714 Sum_probs=331.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCcccc-CcceEEeccccCCCCCccccccCCCeEEEEE
Q 007218 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSP-AGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~-~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.++|+|+||++++..++|+|+|.|.+. ....|+||...+...... .+.. ..+|+.... +|+..|++|+|+
T Consensus 42 ~~~peQvhlS~~~~~~~m~VswvT~~~---~~~~V~Yg~~~~~~~~~~~~~~~----~~~~~~y~~--~~~~sg~ih~~~ 112 (452)
T KOG1378|consen 42 VNSPEQVHLSFTDNLNEMRVSWVTGDG---EENVVRYGEVKDKLDNSAARGMT----EAWTDGYAN--GWRDSGYIHDAV 112 (452)
T ss_pred CCCCCeEEEeccCCCCcEEEEEeCCCC---CCceEEEeecCCCccccccccce----EEEeccccc--ccceeeeEeeee
Confidence 367999999999998899999999964 348999997654422221 1111 122332222 567899999999
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc
Q 007218 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL 324 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~ 324 (612)
|++|+|+|+|+||||++ ..||++|+|+|+| +++.+.+|+++||||...... .+.....+.
T Consensus 113 ~~~L~~~t~YyY~~Gs~-----~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~-------------s~~~~~~~~ 172 (452)
T KOG1378|consen 113 MKNLEPNTRYYYQVGSD-----LKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT-------------STLRNQEEN 172 (452)
T ss_pred ecCCCCCceEEEEeCCC-----CCcccceEeECCC--CccCceeEEEEcccccccccc-------------chHhHHhcc
Confidence 99999999999999986 3499999999998 445679999999999876421 233333333
Q ss_pred CCCCEEEEcCccccCCCcc-cHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCC-
Q 007218 325 KNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE- 402 (612)
Q Consensus 325 ~~pdfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~- 402 (612)
.++|+|||+|||+|++++. .+||+|++++||+++.+|||++.||||++++... |+.+|..||.||.+
T Consensus 173 ~k~d~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~-----------~F~~y~~Rf~mP~~~ 241 (452)
T KOG1378|consen 173 LKPDAVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP-----------CFVPYSARFNMPGNS 241 (452)
T ss_pred cCCcEEEEecchhhcCCCCccchHHHHhhhhhhhccCceEEecccccccCCCcc-----------cccccceeeccCCCc
Confidence 4799999999999999998 6999999999999999999999999999976543 55788999999954
Q ss_pred --CCCceEEEEEeCCEEEEEEcCCCCC--CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCC-ccCCCCccch
Q 007218 403 --NRAKFWYSTDYGMFRFCIADTEQDW--REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLS-YAVEGSFAEP 477 (612)
Q Consensus 403 --~~~~~yYsfd~G~v~Fi~LDT~~~~--~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~-~~~~~~~~~~ 477 (612)
...++|||||+|+||||+|+|+.++ ..+.+|++||+++|++++|+++||+||++|+|+ |++... +..+|.. +.
T Consensus 242 s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~-Y~S~~~~~~reG~~-~~ 319 (452)
T KOG1378|consen 242 SESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPM-YCSSNDAHYREGEF-ES 319 (452)
T ss_pred CCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccc-eecCCchhhccCcc-hh
Confidence 3456999999999999999999985 457899999999999999888999999999999 666542 3445543 24
Q ss_pred hhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCC--CCCCCCCCCCceeee
Q 007218 478 MGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGAS--LSPFTTLQTTWSLYR 555 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~--l~~~~~~~~~ws~~~ 555 (612)
+ |..||+||.+++||++|+||+|+|||+||++|.+|....+..+..++.|||||++|.||+. +..+..++|+||++|
T Consensus 320 ~-~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~~~~~~~~~~~d~~aPvyI~~G~~G~~e~~~~~~~~~p~~Sa~R 398 (452)
T KOG1378|consen 320 M-REGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTCGTGWGPVHLVDGMAPIYITVGDGGNHEHLDPFSSPQPEWSAFR 398 (452)
T ss_pred h-HHHHHHHHHHhceeEEEeccceehhccchhhcceeeccCCcccccCCCCCEEEEEccCCcccccCcccCCCCcccccc
Confidence 4 7899999999999999999999999999999999987665555568899999999999964 556666899999999
Q ss_pred eCCceEEEEEEecCCeEEEEEEEC--CCCcEEEEEEEEecCCCcccccccCCCC
Q 007218 556 DYDHGFVKLTAFDHSNLLFEYKKS--RDGKVYDSFRISRDYRDILACSVDSCPS 607 (612)
Q Consensus 556 ~~~~Gy~~l~v~n~~~L~~~~~~~--~dG~v~D~f~i~k~~~~~~~~~~~~~~~ 607 (612)
..+|||++|+++|+|++.++++++ .+|++.|+|+|.|++.+...|....|.+
T Consensus 399 ~~dfG~~~L~v~N~TH~~~~~~~~~d~~g~~~D~fwl~k~~~~~~~~~~~~~~~ 452 (452)
T KOG1378|consen 399 EGDFGYTRLTAKNGTHAHVHWVRNSDASGVVIDSFWLIKDYRDMVVGVLLGCIP 452 (452)
T ss_pred cccCCeEEEEEecCceEEEEEEeccCCCceEeeeEEEEcccCccccccccccCC
Confidence 999999999999999999999985 3478999999999999999999988863
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=6.9e-70 Score=590.22 Aligned_cols=379 Identities=26% Similarity=0.441 Sum_probs=310.4
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcc-eEEeccccCCCCCccccccCCCeEEE
Q 007218 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGT-LTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
+++..|.|+|||+++ +++|+|+|.|... ..+.|+||++++....++.++ .+|... ..| .+|++|+
T Consensus 39 ~~~~~P~qvhls~~~-~~~m~V~W~T~~~---~~~~V~yG~~~~~l~~~a~g~~~~~~~~---------~~~-~~g~iH~ 104 (427)
T PLN02533 39 DDPTHPDQVHISLVG-PDKMRISWITQDS---IPPSVVYGTVSGKYEGSANGTSSSYHYL---------LIY-RSGQIND 104 (427)
T ss_pred CCCCCCceEEEEEcC-CCeEEEEEECCCC---CCCEEEEecCCCCCcceEEEEEEEEecc---------ccc-cCCeEEE
Confidence 477899999999996 8999999999964 458999999877655554443 456521 123 4799999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHH
Q 007218 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ 322 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~ 322 (612)
|+|+||+|+|+|+|||+.. .+|+.++|+|+|.. .++||+++||+|.... ...+++.+.+
T Consensus 105 v~l~~L~p~T~Y~Yrvg~~------~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~------------~~~tl~~i~~ 163 (427)
T PLN02533 105 VVIGPLKPNTVYYYKCGGP------SSTQEFSFRTPPSK---FPIKFAVSGDLGTSEW------------TKSTLEHVSK 163 (427)
T ss_pred EEeCCCCCCCEEEEEECCC------CCccceEEECCCCC---CCeEEEEEEeCCCCcc------------cHHHHHHHHh
Confidence 9999999999999999853 25889999998863 4699999999986431 1245666654
Q ss_pred hcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCC
Q 007218 323 DLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE 402 (612)
Q Consensus 323 ~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~ 402 (612)
.+||||||+||++|++++..+|++|++.++++++.+|+|+++||||.+... ....+....|..+|.||..
T Consensus 164 --~~pD~vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~--------~~~~~~f~~y~~rf~mP~~ 233 (427)
T PLN02533 164 --WDYDVFILPGDLSYANFYQPLWDTFGRLVQPLASQRPWMVTHGNHELEKIP--------ILHPEKFTAYNARWRMPFE 233 (427)
T ss_pred --cCCCEEEEcCccccccchHHHHHHHHHHhhhHhhcCceEEeCccccccccc--------cccCcCccchhhcccCCcc
Confidence 689999999999999988889999999999999999999999999986321 0112233567789999963
Q ss_pred ---CCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhh
Q 007218 403 ---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMG 479 (612)
Q Consensus 403 ---~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~ 479 (612)
...+.||||++|++|||+||++.++..+++|++||+++|++++|+++||+||++|+|+ |+++..+..+. ....+
T Consensus 234 ~~g~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~-y~s~~~~~~~~-~~~~~- 310 (427)
T PLN02533 234 ESGSTSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPW-YNSNEAHQGEK-ESVGM- 310 (427)
T ss_pred ccCCCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCe-eecccccCCcc-hhHHH-
Confidence 2357899999999999999999988888999999999999998888999999999999 87754332111 11234
Q ss_pred HHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCC---CCCCCCCCCceeeee
Q 007218 480 RESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASL---SPFTTLQTTWSLYRD 556 (612)
Q Consensus 480 r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l---~~~~~~~~~ws~~~~ 556 (612)
|+.|++||.+++|||+|+||+|.|||++|++++++ .+.||+|||+|+||+.. ..+..++|+|+++|.
T Consensus 311 r~~le~Ll~~~~VdlvlsGH~H~YeR~~p~~~~~~----------~~~gpvyiv~G~gG~~e~~~~~~~~~~~~~s~~r~ 380 (427)
T PLN02533 311 KESMETLLYKARVDLVFAGHVHAYERFDRVYQGKT----------DKCGPVYITIGDGGNREGLATKYIDPKPDISLFRE 380 (427)
T ss_pred HHHHHHHHHHhCCcEEEecceecccccccccCCcc----------CCCCCEEEEeCCCccccccccccCCCCCCceeEEe
Confidence 88999999999999999999999999999999876 34799999999999874 345567899999999
Q ss_pred CCceEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEecCCCccccc
Q 007218 557 YDHGFVKLTAFDHSNLLFEYKKSRDGK--VYDSFRISRDYRDILACS 601 (612)
Q Consensus 557 ~~~Gy~~l~v~n~~~L~~~~~~~~dG~--v~D~f~i~k~~~~~~~~~ 601 (612)
.+|||++|++.|.++|+++|+++.+|+ +.|+|||+|-... -+|.
T Consensus 381 ~~~G~~~l~v~n~t~l~~~~~~~~~~~~~~~D~~~i~~~~~~-~~~~ 426 (427)
T PLN02533 381 ASFGHGQLNVVDANTMEWTWHRNDDDQSVASDSVWLKSLLTE-PGCN 426 (427)
T ss_pred ccCCEEEEEEEcCCeEEEEEEecCCCCceeeeEEEEEeccCC-CccC
Confidence 999999999999999999999977764 8999999997655 4453
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=2.2e-47 Score=396.99 Aligned_cols=282 Identities=38% Similarity=0.674 Sum_probs=223.4
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcc--cHHHHHHHhhhccccCCCe
Q 007218 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI--SQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~--~~wd~f~~~i~~l~~~vP~ 362 (612)
.++||+++||+|... ..+.+++++++++..+|||||++||++|+.+.. .+|+.|++.++++.+.+|+
T Consensus 3 ~~~~f~v~gD~~~~~-----------~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 71 (294)
T cd00839 3 TPFKFAVFGDMGQNT-----------NNSTNTLDHLEKELGNYDAILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVPY 71 (294)
T ss_pred CcEEEEEEEECCCCC-----------CCcHHHHHHHHhccCCccEEEEcCchhhhcCCccchhHHHHHHHHHHHHhcCCc
Confidence 359999999999752 123567888877556899999999999988765 7899999999999999999
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccccccccC---CCCCCceEEEEEeCCEEEEEEcCCCCC---CCCHHHHHH
Q 007218 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVP---TENRAKFWYSTDYGMFRFCIADTEQDW---REGTEQYRF 436 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P---~~~~~~~yYsfd~G~v~Fi~LDT~~~~---~~g~~Q~~W 436 (612)
++++||||........+... ...++.++ .....+.||+|++|++|||+|||+... ..+.+|++|
T Consensus 72 ~~~~GNHD~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~W 141 (294)
T cd00839 72 MVTPGNHEADYNFSFYKIKA----------FFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDW 141 (294)
T ss_pred EEcCcccccccCCCCccccc----------ccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHH
Confidence 99999999975432111100 00012222 223467899999999999999998765 567899999
Q ss_pred HHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceecc
Q 007218 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTN 516 (612)
Q Consensus 437 L~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~ 516 (612)
|+++|+++++.+.+|+||++|+|+ |++....... ...... ++.|++||++|+|+++|+||+|.|+|++|+++++|.
T Consensus 142 L~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~~~~~-~~~~~~-~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~~~- 217 (294)
T cd00839 142 LEADLAKVDRSKTPWIIVMGHRPM-YCSNTDHDDC-IEGEKM-RAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGTVV- 217 (294)
T ss_pred HHHHHHHhcccCCCeEEEEeccCc-EecCcccccc-chhHHH-HHHHHHHHHHhCCCEEEEccceeeEeechhhCCEec-
Confidence 999999986667799999999999 7765432211 011233 889999999999999999999999999999999886
Q ss_pred CCCccccCCCCCeEEEEECCCCCCCCCCCCC--CCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCcEEEEEEEEe
Q 007218 517 KEKHYYKGSLNGTIHIAAGGAGASLSPFTTL--QTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRISR 592 (612)
Q Consensus 517 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~--~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v~D~f~i~k 592 (612)
.......+++|++|||+|+||+.++..... .++|++++..++||++|++.++++|+++++.+.+|+|+|+|+|.|
T Consensus 218 -~~~~~~~~~~g~~yiv~G~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~t~l~~~~~~~~~g~v~D~f~i~k 294 (294)
T cd00839 218 -GDCNPYSNPKGPVHIVIGAGGNDEGLDPFSAPPPAWSAFRESDYGFGRLTVHNSTHLHFEWIRNDDGVVIDSFWIIK 294 (294)
T ss_pred -cccccccCCCccEEEEECCCccccCcCcccCCCCCceEEEeccCCEEEEEEEecCeEEEEEEECCCCeEEEEEEEeC
Confidence 222222467899999999999998654332 358999999999999999988789999999999999999999986
No 4
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=100.00 E-value=1.2e-33 Score=298.13 Aligned_cols=271 Identities=17% Similarity=0.256 Sum_probs=191.7
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCc----ccHHHH-HHHhhhccc--
Q 007218 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQ-FTAQIEPIA-- 357 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~----~~~wd~-f~~~i~~l~-- 357 (612)
..++|+++||+|.+.. .|....+.|.++.++ .++|||+.+||+. .+|. ..+|+. |-+.+.+..
T Consensus 25 ~~l~F~~vGDwG~g~~--------~Q~~VA~~M~~~~~~-~~~~FVls~GDNF-~~Gv~sv~Dp~f~~~FE~vY~~~s~~ 94 (394)
T PTZ00422 25 AQLRFASLGNWGTGSK--------QQKLVASYLKQYAKN-ERVTFLVSPGSNF-PGGVDGLNDPKWKHCFENVYSEESGD 94 (394)
T ss_pred CeEEEEEEecCCCCch--------hHHHHHHHHHHHHHh-CCCCEEEECCccc-cCCCCCccchhHHhhHhhhccCcchh
Confidence 3489999999996432 133334455555554 6899999999998 5653 456665 333344433
Q ss_pred cCCCeEEccCCCccCCCCCCC--CCCC----CCCCC--ccc--cccccccccCCCCCCceEEEE----Ee----------
Q 007218 358 STVPYMIASGNHERDWPGTGS--FYGN----MDSGG--ECG--VLVENMFYVPTENRAKFWYST----DY---------- 413 (612)
Q Consensus 358 ~~vP~~~~~GNHD~~~~~~~~--~y~~----~dsgg--e~g--~~~~~~f~~P~~~~~~~yYsf----d~---------- 413 (612)
.++||++++||||+..+.... .|.. .+.-. +.. .....||.||. .||++ ..
T Consensus 95 L~~Pwy~vLGNHDy~Gn~~AQi~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP~-----~yY~~~~~f~~~~~~~~~~~~ 169 (394)
T PTZ00422 95 MQIPFFTVLGQADWDGNYNAELLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMPN-----YWYHYFTHFTDTSGPSLLKSG 169 (394)
T ss_pred hCCCeEEeCCcccccCCchhhhccccccccccccccccccccccccCCCccCCc-----hhheeeeeeeccccccccccc
Confidence 579999999999986432211 0110 00000 000 01136888984 47754 22
Q ss_pred ---CCEEEEEEcCCCC-----C-CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHH
Q 007218 414 ---GMFRFCIADTEQD-----W-REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQ 484 (612)
Q Consensus 414 ---G~v~Fi~LDT~~~-----~-~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~ 484 (612)
..+.||++||... + .....|++||+++|+.. ++.++|+||++|||+ |+++.+ +.. ..+ ++.|+
T Consensus 170 ~~~~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPI-ySsG~h-g~~----~~L-~~~L~ 241 (394)
T PTZ00422 170 HKDMSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPI-YSSGSS-KGD----SYL-SYYLL 241 (394)
T ss_pred CCCCEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCce-eecCCC-CCC----HHH-HHHHH
Confidence 1289999999632 1 12468999999999753 356789999999999 998653 221 234 88999
Q ss_pred HHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEE
Q 007218 485 KLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKL 564 (612)
Q Consensus 485 ~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l 564 (612)
|||++|+||++|+||+|+|||.. .+++.||++|+||...... ....+|+.|....+||+.+
T Consensus 242 PLL~ky~VdlYisGHDH~lq~i~------------------~~gt~yIvSGaGs~~~~~~-~~~~~~s~F~~~~~GF~~~ 302 (394)
T PTZ00422 242 PLLKDAQVDLYISGYDRNMEVLT------------------DEGTAHINCGSGGNSGRKS-IMKNSKSLFYSEDIGFCIH 302 (394)
T ss_pred HHHHHcCcCEEEEccccceEEec------------------CCCceEEEeCccccccCCC-CCCCCCcceecCCCCEEEE
Confidence 99999999999999999999973 2478899999998765432 2346778888899999999
Q ss_pred EEecCCeEEEEEEECCCCcEEEEEEEEecCCCcc
Q 007218 565 TAFDHSNLLFEYKKSRDGKVYDSFRISRDYRDIL 598 (612)
Q Consensus 565 ~v~n~~~L~~~~~~~~dG~v~D~f~i~k~~~~~~ 598 (612)
++ +++.|+++|+.+.+|++++++++.++.|..+
T Consensus 303 ~l-~~~~l~~~fid~~~GkvL~~~~~~~~~~~~~ 335 (394)
T PTZ00422 303 EL-NAEGMVTKFVSGNTGEVLYTHKQPLKKRKLR 335 (394)
T ss_pred EE-ecCEEEEEEEeCCCCcEEEEeeecccchhhh
Confidence 98 8899999999668999999999987766443
No 5
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.98 E-value=4.2e-31 Score=272.54 Aligned_cols=247 Identities=22% Similarity=0.369 Sum_probs=175.7
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcc----cHHH-HHHHhhhccccCCC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI----SQWD-QFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~----~~wd-~f~~~i~~l~~~vP 361 (612)
++|+++||+|.... ..|......+.+++++ .+|||||++||++|++|.. ..|. .|.+.++.+..++|
T Consensus 1 ~~f~~~gD~g~~~~-------~~~~~~~~~~~~~~~~-~~~dfvv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~~P 72 (277)
T cd07378 1 LRFLALGDWGGGGT-------AGQKAVAKAMAKVAAE-LGPDFILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQVP 72 (277)
T ss_pred CeEEEEeecCCCCC-------HHHHHHHHHHHHHHHh-cCCCEEEeCCCccccCCCCCCcchHHHHHHHHHccchhhcCC
Confidence 48999999997521 0122233445555554 6899999999999988742 3343 45555555556899
Q ss_pred eEEccCCCccCCCCCCC-CCCCCCCCCccccccccccccCCCCCCceEEEEEeC------CEEEEEEcCCCCC-------
Q 007218 362 YMIASGNHERDWPGTGS-FYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYG------MFRFCIADTEQDW------- 427 (612)
Q Consensus 362 ~~~~~GNHD~~~~~~~~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G------~v~Fi~LDT~~~~------- 427 (612)
+|+++||||........ .|.. .++..+|.+| +.||+|+++ +++||+|||....
T Consensus 73 ~~~v~GNHD~~~~~~~~~~~~~--------~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~ 139 (277)
T cd07378 73 WYLVLGNHDYSGNVSAQIDYTK--------RPNSPRWTMP-----AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIA 139 (277)
T ss_pred eEEecCCcccCCCchheeehhc--------cCCCCCccCc-----chheEEEeecCCCCCEEEEEEEeChhHcCcccccc
Confidence 99999999986321100 0000 0012334444 468999998 7999999998531
Q ss_pred --------CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecc
Q 007218 428 --------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGH 499 (612)
Q Consensus 428 --------~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH 499 (612)
..+.+|++||+++|++. ..+|+||++|+|+ ++.... . . .... ++.|++++++++|+++|+||
T Consensus 140 ~~~~~~~~~~~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~-~~~~~~-~--~--~~~~-~~~l~~l~~~~~v~~vl~GH 209 (277)
T cd07378 140 SPYGPPNGKLAEEQLAWLEKTLAAS---TADWKIVVGHHPI-YSSGEH-G--P--TSCL-VDRLLPLLKKYKVDAYLSGH 209 (277)
T ss_pred ccccCcchhhHHHHHHHHHHHHHhc---CCCeEEEEeCccc-eeCCCC-C--C--cHHH-HHHHHHHHHHcCCCEEEeCC
Confidence 13589999999999985 3489999999999 765432 1 1 1233 78999999999999999999
Q ss_pred cccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCC---CCCCceeeeeCCceEEEEEEecCCeEEEEE
Q 007218 500 VHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTT---LQTTWSLYRDYDHGFVKLTAFDHSNLLFEY 576 (612)
Q Consensus 500 ~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~---~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~ 576 (612)
+|.+++..+. ..++.||++|+||........ ..++|..++...+||.+|++ ++++|+++|
T Consensus 210 ~H~~~~~~~~----------------~~~~~~i~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~Gy~~i~v-~~~~l~~~~ 272 (277)
T cd07378 210 DHNLQHIKDD----------------GSGTSFVVSGAGSKARPSVKHIDKVPQFFSGFTSSGGGFAYLEL-TKEELTVRF 272 (277)
T ss_pred cccceeeecC----------------CCCcEEEEeCCCcccCCCCCccCcccccccccccCCCCEEEEEE-ecCEEEEEE
Confidence 9999988531 248899999998876543321 23468888889999999999 678999999
Q ss_pred EECCCC
Q 007218 577 KKSRDG 582 (612)
Q Consensus 577 ~~~~dG 582 (612)
+ +.||
T Consensus 273 ~-~~~g 277 (277)
T cd07378 273 Y-DADG 277 (277)
T ss_pred E-CCCC
Confidence 8 6665
No 6
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.95 E-value=1.1e-26 Score=237.80 Aligned_cols=239 Identities=16% Similarity=0.168 Sum_probs=161.8
Q ss_pred ceEEEEEecCCCCCCCCCCcc--cccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcc----cHHHHHHHhhhc
Q 007218 286 LQQVIIFGDMGKDEADGSNEY--NNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYI----SQWDQFTAQIEP 355 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~--~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~----~~wd~f~~~i~~ 355 (612)
+++|++++|+|.+...+...+ ..+ ......++++++. .++||||+++||+++..... .+|+.|.+.++.
T Consensus 4 ~~~f~~~sD~h~~~~~~~~~~~~~~~-~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~ 82 (262)
T cd07395 4 PFYFIQGADPQLGLIKKNLEGGGDEW-DEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSL 82 (262)
T ss_pred CEEEEEecCCccchhhccccCchhhh-hhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhh
Confidence 599999999999854322111 011 1122334444433 24899999999999654332 356667777776
Q ss_pred cccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCC------CC
Q 007218 356 IASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW------RE 429 (612)
Q Consensus 356 l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~------~~ 429 (612)
+...+|+++++||||....... ....+|. ...++.||+|++|+++||+|||.... ..
T Consensus 83 ~~~~vp~~~i~GNHD~~~~~~~--------------~~~~~f~---~~~g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~ 145 (262)
T cd07395 83 LDPDIPLVCVCGNHDVGNTPTE--------------ESIKDYR---DVFGDDYFSFWVGGVFFIVLNSQLFFDPSEVPEL 145 (262)
T ss_pred ccCCCcEEEeCCCCCCCCCCCh--------------hHHHHHH---HHhCCcceEEEECCEEEEEeccccccCccccccc
Confidence 6668999999999998532110 0011221 01124589999999999999997532 13
Q ss_pred CHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCC--ccchhhHHHHHHHHHhCCCeEEEecccccceeee
Q 007218 430 GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGS--FAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 430 g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~--~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
..+|++||+++|++..+.+.+++||++|+|+ +..... ..+.. ..... ++.|.++|++++|+++|+||+|.+++..
T Consensus 146 ~~~ql~WL~~~L~~~~~~~~~~~iv~~H~P~-~~~~~~-~~~~~~~~~~~~-~~~l~~ll~~~~V~~v~~GH~H~~~~~~ 222 (262)
T cd07395 146 AQAQDVWLEEQLEIAKESDCKHVIVFQHIPW-FLEDPD-EEDSYFNIPKSV-RKPLLDKFKKAGVKAVFSGHYHRNAGGR 222 (262)
T ss_pred hHHHHHHHHHHHHHHHhccCCcEEEEECcCC-ccCCCC-CCcccCCcCHHH-HHHHHHHHHhcCceEEEECccccCCceE
Confidence 4799999999999875446779999999999 643321 11111 11223 7899999999999999999999987642
Q ss_pred cccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEE
Q 007218 508 PIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 508 p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~ 577 (612)
.+|+.+++++++|..+. ....||..+++ +++.+++||+
T Consensus 223 ------------------~~g~~~~~~~~~~~~~~-------------~~~~g~~~~~v-~~~~~~~~~~ 260 (262)
T cd07395 223 ------------------YGGLEMVVTSAIGAQLG-------------NDKSGLRIVKV-TEDKIVHEYY 260 (262)
T ss_pred ------------------ECCEEEEEcCceecccC-------------CCCCCcEEEEE-CCCceeeeee
Confidence 14677888887776431 23589999999 6778899987
No 7
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.94 E-value=5.1e-26 Score=222.59 Aligned_cols=259 Identities=22% Similarity=0.338 Sum_probs=166.4
Q ss_pred CCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHH-HHHHhhhccc----
Q 007218 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIA---- 357 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~---- 357 (612)
++..++|+++||+|.... |+ |......+..|.++ -++||||.+||++|++|...+.| .|.+.++.+.
T Consensus 40 ~dgslsflvvGDwGr~g~-----~n--qs~va~qmg~ige~-l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pS 111 (336)
T KOG2679|consen 40 SDGSLSFLVVGDWGRRGS-----FN--QSQVALQMGEIGEK-LDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPS 111 (336)
T ss_pred CCCceEEEEEcccccCCc-----hh--HHHHHHHHHhHHHh-ccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcc
Confidence 456799999999995431 21 22122344445443 68999999999999999766655 3444444432
Q ss_pred cCCCeEEccCCCccCCCCCCC---CCCCCCCCCccccccccccccCCCCCCceEE--E----EEeCCEEEEEEcCCC---
Q 007218 358 STVPYMIASGNHERDWPGTGS---FYGNMDSGGECGVLVENMFYVPTENRAKFWY--S----TDYGMFRFCIADTEQ--- 425 (612)
Q Consensus 358 ~~vP~~~~~GNHD~~~~~~~~---~y~~~dsgge~g~~~~~~f~~P~~~~~~~yY--s----fd~G~v~Fi~LDT~~--- 425 (612)
-+.||+.+.||||+..+-... .|. ....||..|.. || + +..-++.++++|+-.
T Consensus 112 LQkpWy~vlGNHDyrGnV~AQls~~l~----------~~d~RW~c~rs-----f~~~ae~ve~f~v~~~~f~~d~~~~~~ 176 (336)
T KOG2679|consen 112 LQKPWYSVLGNHDYRGNVEAQLSPVLR----------KIDKRWICPRS-----FYVDAEIVEMFFVDTTPFMDDTFTLCT 176 (336)
T ss_pred cccchhhhccCccccCchhhhhhHHHH----------hhccceecccH-----Hhhcceeeeeeccccccchhhheeccc
Confidence 357999999999997532210 011 01234444421 11 0 011123334433321
Q ss_pred ----CCC-------CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeE
Q 007218 426 ----DWR-------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDI 494 (612)
Q Consensus 426 ----~~~-------~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdl 494 (612)
+|+ ....|+.||+..|++ +.++|+||++|+|+ .+.+. |+ .. ..+ +++|.|||++++||+
T Consensus 177 ~~~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i-~S~~~-HG---~T-~eL-~~~LlPiL~~n~Vdl 246 (336)
T KOG2679|consen 177 DDVYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPI-KSAGH-HG---PT-KEL-EKQLLPILEANGVDL 246 (336)
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccce-ehhhc-cC---Ch-HHH-HHHHHHHHHhcCCcE
Confidence 121 125788999999998 68899999999998 66542 33 22 234 899999999999999
Q ss_pred EEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCce----eeeeCCceEEEEEEecCC
Q 007218 495 AVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWS----LYRDYDHGFVKLTAFDHS 570 (612)
Q Consensus 495 vlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws----~~~~~~~Gy~~l~v~n~~ 570 (612)
+++||+|..|..- .++.++.+++.+||++...-...+|.|. .|.-..-||..+++ .+.
T Consensus 247 Y~nGHDHcLQhis-----------------~~e~~iqf~tSGagSkaw~g~~~~~~~~p~~lkF~YdgqGfmsv~i-s~~ 308 (336)
T KOG2679|consen 247 YINGHDHCLQHIS-----------------SPESGIQFVTSGAGSKAWRGTDHNPEVNPKELKFYYDGQGFMSVEI-SHS 308 (336)
T ss_pred EEecchhhhhhcc-----------------CCCCCeeEEeeCCcccccCCCccCCccChhheEEeeCCCceEEEEE-ecc
Confidence 9999999998773 2234444444455555322222334443 44445569999998 788
Q ss_pred eEEEEEEECCCCcEEEEEEEEec
Q 007218 571 NLLFEYKKSRDGKVYDSFRISRD 593 (612)
Q Consensus 571 ~L~~~~~~~~dG~v~D~f~i~k~ 593 (612)
.+++.|+ +..|+++.+....|+
T Consensus 309 e~~vvfy-D~~G~~Lhk~~t~kr 330 (336)
T KOG2679|consen 309 EARVVFY-DVSGKVLHKWSTSKR 330 (336)
T ss_pred eeEEEEE-eccCceEEEeecccc
Confidence 9999998 899999998775554
No 8
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.90 E-value=4.5e-22 Score=219.38 Aligned_cols=310 Identities=17% Similarity=0.273 Sum_probs=149.2
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHH
Q 007218 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNT 316 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~ 316 (612)
..+.+++.++||+|+|+|+||+... +....|..++|||+|... ...+||++++|.+... +....
T Consensus 60 ~d~t~~v~v~gL~p~t~Y~Y~~~~~---~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~------------~~~~~ 123 (453)
T PF09423_consen 60 RDFTVKVDVTGLQPGTRYYYRFVVD---GGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYED------------GYFPA 123 (453)
T ss_dssp GTTEEEEEE-S--TT-EEEEEEEE-----TTEE---EEEE--TT------EEEEEE----CCC---------------HH
T ss_pred CCeEeecccCCCCCCceEEEEEEEe---cCCCCCCceEEEcCCCCC-CCceEEEEECCCCccc------------ChHHH
Confidence 4689999999999999999999984 123447899999996543 3359999999997532 12456
Q ss_pred HHHHHHhcCCCCEEEEcCccccCCCc-----------------------c----cHHHHHH--HhhhccccCCCeEEccC
Q 007218 317 TRQLIQDLKNIDIVFHIGDICYANGY-----------------------I----SQWDQFT--AQIEPIASTVPYMIASG 367 (612)
Q Consensus 317 ~~~l~~~~~~pdfvl~~GDi~Y~~g~-----------------------~----~~wd~f~--~~i~~l~~~vP~~~~~G 367 (612)
+..++++ .+|||+||+||.+|+++. . ..|..+. ..++.+.+.+|+++++.
T Consensus 124 ~~~~a~~-~~~D~~l~lGD~IY~d~~~~~~~~~~~~~~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwD 202 (453)
T PF09423_consen 124 YRRIAER-DDPDFVLHLGDQIYEDGGGGYGNLSRRPIGRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWD 202 (453)
T ss_dssp HHHHTT--S--SEEEE-S-SS----TTSS--TT---S-----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---
T ss_pred HHhhhcc-CCCcEEEEeCCeeeccCCcccccccccccccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEcc
Confidence 7777764 589999999999998742 0 1122221 34566778899999999
Q ss_pred CCccCCCCCCCCCCCCCCCCccc-------ccccccc-ccCCC------CCCceEEEEEeCC-EEEEEEcCCCCCC----
Q 007218 368 NHERDWPGTGSFYGNMDSGGECG-------VLVENMF-YVPTE------NRAKFWYSTDYGM-FRFCIADTEQDWR---- 428 (612)
Q Consensus 368 NHD~~~~~~~~~y~~~dsgge~g-------~~~~~~f-~~P~~------~~~~~yYsfd~G~-v~Fi~LDT~~~~~---- 428 (612)
+||+..+..+. ...... ...+ ..++..+ .+|.. .....|++|++|+ +.|++||++....
T Consensus 203 DHdi~nn~~~~-~~~~~~-~~~~~~~~~~~~a~~ay~e~~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~ 280 (453)
T PF09423_consen 203 DHDIGNNWWGD-GAENHQ-DTSGDFQDRRRAAYQAYFEYQPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPC 280 (453)
T ss_dssp STTTSTT-BTT-B-STT----HHHHHHHHHHHHHHHHHHS---GGG-BTTB----EEEEETTTEEEEE--SSSS----CC
T ss_pred CceecccccCC-cccccc-ccccchHHHHHHHHHHHHhhcCccCCCccCCCCceEEEEecCCceeEEEEechhccccccc
Confidence 99996332100 000000 0000 0111111 23322 1356799999999 9999999985321
Q ss_pred -----------------CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCc-------cCCCCccchhhHHHHH
Q 007218 429 -----------------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSY-------AVEGSFAEPMGRESLQ 484 (612)
Q Consensus 429 -----------------~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~-------~~~~~~~~~~~r~~l~ 484 (612)
.|.+|++||++.|++ +.++|+|++.-.|+ ....... ..+..-.-+..|++|.
T Consensus 281 ~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~~kvi~s~v~~-~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll 356 (453)
T PF09423_consen 281 DGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQATWKVIGSSVPF-SPLNFPDAAEGLPFNMDSWDGYPAERQRLL 356 (453)
T ss_dssp CSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SSEEEEE-SS---S---SS-SS-S--EETTSGGGSHHHHHHHH
T ss_pred cccccccccccCCccCcCCHHHHHHHHHHHhc---CCCcEEEEEeCCce-ecccccccccccccCCCchhhCHHHHHHHH
Confidence 368999999999998 56899999988876 3221110 1111100112289999
Q ss_pred HHHHhCCCe--EEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECC---CCCCCCCCC------CCCCCcee
Q 007218 485 KLWQKYKVD--IAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGG---AGASLSPFT------TLQTTWSL 553 (612)
Q Consensus 485 ~ll~k~~Vd--lvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~---gG~~l~~~~------~~~~~ws~ 553 (612)
.+|.+.++. ++|+|++|...-..--.+..-.. . ......+-+++++ +|..+.... ....++-.
T Consensus 357 ~~l~~~~~~~vV~LSGDvH~~~~~~~~~~~~~~~----~--~~~~~~~Ef~~s~vts~~~~~~~~~~~~~~~~~~np~~~ 430 (453)
T PF09423_consen 357 DFLRESGIRNVVFLSGDVHASAASRIPPDDADPP----D--GPGSVGVEFTSSSVTSPGFGLGTSPALDRALDKANPHLK 430 (453)
T ss_dssp HHHHHTT---EEEEE-SSSSEEEEEEESSTT-------T--TS-EEEEEEE---SSTT-S-BSB-TTHHH-HHHH-TTEE
T ss_pred HHHHhhCCCCEEEEecCcchheeeeccccccccc----C--CCCCeEEEEECCCccCCCcccccchhhhhhhhhcCCceE
Confidence 999988876 88999999976554222110000 0 0001123344443 122100000 01123444
Q ss_pred ee-eCCceEEEEEEecCCeEEEEE
Q 007218 554 YR-DYDHGFVKLTAFDHSNLLFEY 576 (612)
Q Consensus 554 ~~-~~~~Gy~~l~v~n~~~L~~~~ 576 (612)
|. ...+||+.|++ +.+.++.+|
T Consensus 431 ~~~~~~~G~~~i~~-~~~~~~~~~ 453 (453)
T PF09423_consen 431 FADLRNFGYVEIDI-TPERVTAEW 453 (453)
T ss_dssp EEE-B-EEEEEEEE-ETTEEEEEE
T ss_pred EeECCCCcEEEEEE-ccceEEEEC
Confidence 43 36899999999 788998875
No 9
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.90 E-value=1.2e-22 Score=204.91 Aligned_cols=228 Identities=14% Similarity=0.214 Sum_probs=150.5
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
||++++|+|.+.......+ .......++++++. ..+||+|+++||+++. +...+|+.+.+.++.+ .+|++
T Consensus 1 r~~~iSDlH~~~~~~~~~~---~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~l~~~--~~p~~ 74 (240)
T cd07402 1 LLAQISDLHLRADGEGALL---GVDTAASLEAVLAHINALHPRPDLVLVTGDLTDD-GSPESYERLRELLAAL--PIPVY 74 (240)
T ss_pred CEEEEeCCccCCCCcceec---CcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCC-CCHHHHHHHHHHHhhc--CCCEE
Confidence 6999999998754211000 01122334444443 2489999999999954 4455677777777765 78999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCC----CCCHHHHHHHHH
Q 007218 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW----REGTEQYRFIEH 439 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~----~~g~~Q~~WL~~ 439 (612)
.++||||.... + ...|..........+|+|+.++++||+||+.... ....+|++||++
T Consensus 75 ~v~GNHD~~~~-----~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~ 136 (240)
T cd07402 75 LLPGNHDDRAA-----M-------------RAVFPELPPAPGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEA 136 (240)
T ss_pred EeCCCCCCHHH-----H-------------HHhhccccccccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHH
Confidence 99999997411 0 0111000001235678999999999999987532 235789999999
Q ss_pred HHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhC-CCeEEEecccccceeeecccCceeccCC
Q 007218 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICPIYQNICTNKE 518 (612)
Q Consensus 440 ~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~ 518 (612)
.|++.. ..++|+++|+|+ +......... .... .++.+.+++.++ +|+++|+||.|......
T Consensus 137 ~L~~~~---~~~~il~~H~pp-~~~~~~~~~~--~~~~-~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~----------- 198 (240)
T cd07402 137 ALAEAP---DKPTLVFLHHPP-FPVGIAWMDA--IGLR-NAEALAAVLARHPNVRAILCGHVHRPIDGS----------- 198 (240)
T ss_pred HHHhCC---CCCEEEEECCCC-ccCCchhhhh--hhCC-CHHHHHHHHhcCCCeeEEEECCcCchHHeE-----------
Confidence 999852 456888899988 5542211111 1111 267999999999 99999999999975442
Q ss_pred CccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEec
Q 007218 519 KHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFD 568 (612)
Q Consensus 519 ~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n 568 (612)
.+|+.++++|+.|..... .++-..+....+||..+.+++
T Consensus 199 -------~~g~~~~~~gs~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 237 (240)
T cd07402 199 -------WGGIPLLTAPSTCHQFAP----DLDDFALDALAPGYRALSLHE 237 (240)
T ss_pred -------ECCEEEEEcCcceeeecC----CCCcccccccCCCCcEEEEec
Confidence 257888899988776422 223333345678999888754
No 10
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.88 E-value=1e-21 Score=201.89 Aligned_cols=205 Identities=20% Similarity=0.264 Sum_probs=135.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcc---cHHHHHHHhhhccccCCC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYI---SQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~---~~wd~f~~~i~~l~~~vP 361 (612)
|||++++|+|....+.... .+...+...+++++++. .+||+|+++||+++. +.. .+|+.+.+.++.+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~--~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~-~~~~~~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRP--RYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDG-DNARAEEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCccc--chHHHhHHHHHHHHHHHHcCCCCEEEECCCeecC-CCchHHHHHHHHHHHHHhc--CCC
Confidence 6999999999654321100 01112334455555442 469999999999953 333 4555555555544 589
Q ss_pred eEEccCCCccCCCCCCCCCCCCCCCCccccccccccc-cCCCCCCceEEEEEeCCEEEEEEcCCCC--------------
Q 007218 362 YMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFY-VPTENRAKFWYSTDYGMFRFCIADTEQD-------------- 426 (612)
Q Consensus 362 ~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~-~P~~~~~~~yYsfd~G~v~Fi~LDT~~~-------------- 426 (612)
+++++||||....... .+. +.....+..||+|++++++||+||+...
T Consensus 76 ~~~v~GNHD~~~~~~~------------------~~~~~~~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~ 137 (267)
T cd07396 76 VHHVLGNHDLYNPSRE------------------YLLLYTLLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAEN 137 (267)
T ss_pred EEEecCccccccccHh------------------hhhcccccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhh
Confidence 9999999998632110 000 1112235569999999999999998531
Q ss_pred --------------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHH
Q 007218 427 --------------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKL 486 (612)
Q Consensus 427 --------------------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l 486 (612)
...+.+|++||+++|++... +..++||++|+|+ +.... ...... .. ++.+.++
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~-~~~~~--~~~~~~--~~-~~~~~~l 210 (267)
T cd07396 138 ADDNSNLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPL-HPEST--SPHGLL--WN-HEEVLSI 210 (267)
T ss_pred HHHhchhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccC-CCCCC--Cccccc--cC-HHHHHHH
Confidence 12358999999999998642 3356899999998 65432 111111 11 6789999
Q ss_pred HHhC-CCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCC
Q 007218 487 WQKY-KVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGA 539 (612)
Q Consensus 487 l~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~ 539 (612)
+.++ +|+++|+||+|.++... .+|+.|+++|+-..
T Consensus 211 l~~~~~V~~v~~GH~H~~~~~~------------------~~gi~~~~~~a~~~ 246 (267)
T cd07396 211 LRAYGCVKACISGHDHEGGYAQ------------------RHGIHFLTLEGMVE 246 (267)
T ss_pred HHhCCCEEEEEcCCcCCCCccc------------------cCCeeEEEechhhc
Confidence 9995 89999999999987442 25788888887544
No 11
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.87 E-value=2.1e-21 Score=203.78 Aligned_cols=299 Identities=20% Similarity=0.291 Sum_probs=193.4
Q ss_pred CcceeeecCCCCcEEEEEEeCCCCC-----CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007218 170 VYPRLAQGKVWNEMTVTWTSGYGIN-----EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 170 ~~~~La~~~~~~~m~V~W~T~~~~~-----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.+.-++.|+-...-.|.|+.-.+.. +....+||++++.....+..++.. .+ .+..+.+++.
T Consensus 39 F~~GVaSGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~-----------a~---p~~dhtv~v~ 104 (522)
T COG3540 39 FTHGVASGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVI-----------AS---PELDHTVHVD 104 (522)
T ss_pred cccccccCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCcc-----------CC---cccCceEEEe
Confidence 3344555655566677787644211 344567777766543322222111 11 1245889999
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc
Q 007218 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL 324 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~ 324 (612)
++||+|++.|+||+... ..-|.+.+|||+|.++.. ++|+.+||..... |+.+-..+.+.|.+
T Consensus 105 ~~gL~P~~~yfYRf~~~-----~~~spvGrtrTapa~~~~--i~~~~fa~ascQ~---------~~~gy~~aY~~ma~-- 166 (522)
T COG3540 105 LRGLSPDQDYFYRFKAG-----DERSPVGRTRTAPAPGRA--IRFVWFADASCQG---------WEIGYMTAYKTMAK-- 166 (522)
T ss_pred ccCCCCCceEEEEEeeC-----CccccccccccCCCCCCc--chhhhhhhccccc---------cccchhHHHHHHHh--
Confidence 99999999999999875 234789999999998665 7788888875432 33445677788877
Q ss_pred CCCCEEEEcCccccCCCcc-----------------------------cHHHHHH--HhhhccccCCCeEEccCCCccCC
Q 007218 325 KNIDIVFHIGDICYANGYI-----------------------------SQWDQFT--AQIEPIASTVPYMIASGNHERDW 373 (612)
Q Consensus 325 ~~pdfvl~~GDi~Y~~g~~-----------------------------~~wd~f~--~~i~~l~~~vP~~~~~GNHD~~~ 373 (612)
.+|||+||.||.+|+.|-. .+|.++. +.++...+..|+++.+.+||...
T Consensus 167 ~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~N 246 (522)
T COG3540 167 EEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVTQHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVAN 246 (522)
T ss_pred cCCCEEEEcCCeeeccCCcccccccccccccccCCCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccc
Confidence 5799999999999986521 1222221 23556668899999999999974
Q ss_pred CCCCCCCCCCCC-CCccc------ccccccc-ccCCCC-----CCceEEEEEeCC-EEEEEEcCCCCCC-----------
Q 007218 374 PGTGSFYGNMDS-GGECG------VLVENMF-YVPTEN-----RAKFWYSTDYGM-FRFCIADTEQDWR----------- 428 (612)
Q Consensus 374 ~~~~~~y~~~ds-gge~g------~~~~~~f-~~P~~~-----~~~~yYsfd~G~-v~Fi~LDT~~~~~----------- 428 (612)
+-... -...|+ -.|.. ..++.++ .||-.. ....|.+|.||+ ..|.+||++.+..
T Consensus 247 N~~~~-~~~nD~~~~~k~~~~r~a~A~qAyyE~mPiR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~ 325 (522)
T COG3540 247 NWSNS-IDENDSRYDEKDFVLRAAAARQAYYEHMPIRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPN 325 (522)
T ss_pred ccccc-ccccCCCCChHHHHHHHHHHHHHHHHhCccccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcch
Confidence 32110 000021 11110 1112222 466321 257899999999 6899999986431
Q ss_pred -----------CCHHHHHHHHHHHhhccCCCCCeEEEEEcccccc---CCC-----CCccCCCCccchhhHHHHHHHHHh
Q 007218 429 -----------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGY---SSD-----LSYAVEGSFAEPMGRESLQKLWQK 489 (612)
Q Consensus 429 -----------~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~y---ss~-----~~~~~~~~~~~~~~r~~l~~ll~k 489 (612)
.|.+|.+||+..|.+ +++.|+|+..-.||.- ... .....++.-...++|+.|...+++
T Consensus 326 ~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWnVia~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~ 402 (522)
T COG3540 326 CQAVAGSAATMLGEQQEQWLKRGLGA---SKATWNVIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIAD 402 (522)
T ss_pred hhhhhCccccchhhHHHHHHHhhhhh---cchhhhhhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHh
Confidence 268999999999998 7899999998888731 100 000111211234569999999999
Q ss_pred CCCe--EEEecccccce
Q 007218 490 YKVD--IAVFGHVHNYE 504 (612)
Q Consensus 490 ~~Vd--lvlsGH~H~Ye 504 (612)
.++. ++|+|.+|...
T Consensus 403 ~~~~N~V~LtgDvH~~w 419 (522)
T COG3540 403 RKIRNTVVLTGDVHYSW 419 (522)
T ss_pred cCCCCcEEEechhHHHH
Confidence 8876 89999999743
No 12
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.86 E-value=7.7e-20 Score=188.74 Aligned_cols=247 Identities=15% Similarity=0.210 Sum_probs=147.3
Q ss_pred EEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcccHHHHHH
Q 007218 275 FKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFT 350 (612)
Q Consensus 275 F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~~~wd~f~ 350 (612)
.++.++. ...+||+.++|+|...... .... .......+++++++ ..+|||||++||++. ++...+|+.+.
T Consensus 5 ~~~~~~~--~~~~~i~~iSD~Hl~~~~~-~~~~--~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~-~~~~~~~~~~~ 78 (275)
T PRK11148 5 LTLPLAG--EARVRILQITDTHLFADEH-ETLL--GVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQ-DHSSEAYQHFA 78 (275)
T ss_pred cccccCC--CCCEEEEEEcCcccCCCCC-Ccee--ccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCC-CCCHHHHHHHH
Confidence 3455543 2459999999999743211 1110 01123344444433 247999999999994 45556677777
Q ss_pred HhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCC---
Q 007218 351 AQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW--- 427 (612)
Q Consensus 351 ~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~--- 427 (612)
+.++.+ .+|+++++||||.... +. ..+ +.......++.+..++++||+|||....
T Consensus 79 ~~l~~l--~~Pv~~v~GNHD~~~~----~~--------------~~~--~~~~~~~~~~~~~~~~~~~i~Lds~~~g~~~ 136 (275)
T PRK11148 79 EGIAPL--RKPCVWLPGNHDFQPA----MY--------------SAL--QDAGISPAKHVLIGEHWQILLLDSQVFGVPH 136 (275)
T ss_pred HHHhhc--CCcEEEeCCCCCChHH----HH--------------HHH--hhcCCCccceEEecCCEEEEEecCCCCCCcC
Confidence 777665 5899999999997421 00 011 0000111223344556999999997532
Q ss_pred -CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhC-CCeEEEeccccccee
Q 007218 428 -REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYER 505 (612)
Q Consensus 428 -~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeR 505 (612)
..+.+|++||+++|++. .+.+-+|+++|+|+ .....|.... .. .. .++|.++++++ +|+++|+||+|....
T Consensus 137 G~l~~~ql~wL~~~L~~~--~~~~~vv~~hH~P~-~~~~~~~d~~-~l--~n-~~~l~~ll~~~~~v~~vl~GH~H~~~~ 209 (275)
T PRK11148 137 GELSEYQLEWLERKLADA--PERHTLVLLHHHPL-PAGCAWLDQH-SL--RN-AHELAEVLAKFPNVKAILCGHIHQELD 209 (275)
T ss_pred CEeCHHHHHHHHHHHhhC--CCCCeEEEEcCCCC-CCCcchhhcc-CC--CC-HHHHHHHHhcCCCceEEEecccChHHh
Confidence 23589999999999985 23333455555665 3322221111 11 11 57899999998 899999999998543
Q ss_pred eecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEE
Q 007218 506 ICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 506 t~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~ 578 (612)
. ..+|+.++++++.+..... ..... .+.....||..+++.++..+..+.++
T Consensus 210 ~------------------~~~gi~~~~~ps~~~q~~~---~~~~~-~~~~~~~g~~~~~l~~~g~~~~~~~~ 260 (275)
T PRK11148 210 L------------------DWNGRRLLATPSTCVQFKP---HCTNF-TLDTVAPGWRELELHADGSLETEVHR 260 (275)
T ss_pred c------------------eECCEEEEEcCCCcCCcCC---CCCcc-ccccCCCcEEEEEEcCCCcEEEEEEE
Confidence 2 1257777777776654311 11111 12234578888888545566666554
No 13
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.83 E-value=2e-19 Score=183.72 Aligned_cols=195 Identities=15% Similarity=0.212 Sum_probs=121.8
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCC--------cccHHHHHHHhhhccc--c
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANG--------YISQWDQFTAQIEPIA--S 358 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g--------~~~~wd~f~~~i~~l~--~ 358 (612)
|+.++|+|.+..... . .....+.+...+++ .+||+|+++||++.... ...+|+.|++.+.... .
T Consensus 2 ~~~iSDlH~g~~~~~-~----~~~~~~~~~~~i~~-~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (256)
T cd07401 2 FVHISDIHVSSFHPP-N----RAQDETFCSNFIDV-IKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVIN 75 (256)
T ss_pred EEEecccccCCcCch-h----hhhHHHHHHHHHHh-hCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCC
Confidence 789999998753210 0 00000122333333 58999999999995321 2457888888765533 2
Q ss_pred CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCC----------CC
Q 007218 359 TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD----------WR 428 (612)
Q Consensus 359 ~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~----------~~ 428 (612)
..|++.++||||...... . ++ +. ..+.+...........++++++.|+++||+|||... ..
T Consensus 76 ~~p~~~v~GNHD~~~~~~---~---~~--~~-~~~~~y~~~~~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~ 146 (256)
T cd07401 76 KEKWFDIRGNHDLFNIPS---L---DS--EN-NYYRKYSATGRDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGS 146 (256)
T ss_pred cceEEEeCCCCCcCCCCC---c---cc--hh-hHHHHhheecCCCccceEEEecCCCEEEEEEcCccCCCCCCCCceecc
Confidence 689999999999842110 0 00 00 111111111111111222334459999999999742 12
Q ss_pred CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeec
Q 007218 429 EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICP 508 (612)
Q Consensus 429 ~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p 508 (612)
...+|++||+++|++. .+.+++||++|+|+ +..... . ....+ .+.++|++++|+++|+||.|.+++..|
T Consensus 147 l~~~ql~wL~~~L~~~--~~~~~~IV~~HhP~-~~~~~~---~----~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p 215 (256)
T cd07401 147 LDKKLLDRLEKELEKS--TNSNYTIWFGHYPT-STIISP---S----AKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEP 215 (256)
T ss_pred CCHHHHHHHHHHHHhc--ccCCeEEEEEcccc-hhccCC---C----cchhH-HHHHHHHhcCCcEEEeCCccCCCccee
Confidence 3589999999999975 34578999999998 542111 1 01113 399999999999999999999999666
Q ss_pred c
Q 007218 509 I 509 (612)
Q Consensus 509 ~ 509 (612)
+
T Consensus 216 ~ 216 (256)
T cd07401 216 V 216 (256)
T ss_pred e
Confidence 6
No 14
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.79 E-value=9.2e-19 Score=174.11 Aligned_cols=159 Identities=19% Similarity=0.249 Sum_probs=112.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCh-HHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccc-cCCCe
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGS-LNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA-STVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s-~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~-~~vP~ 362 (612)
|||++++|+|..... .+.. ...++++++.. .+||+|+++||+++......+|+.+.+.++.+. ..+|+
T Consensus 1 f~~~~~~D~q~~~~~--------~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~~~~~~~~~~~~~~l~~~~~p~ 72 (214)
T cd07399 1 FTLAVLPDTQYYTES--------YPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDNDAEWEAADKAFARLDKAGIPY 72 (214)
T ss_pred CEEEEecCCCcCCcC--------CHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCCHHHHHHHHHHHHHHHHcCCcE
Confidence 689999999975421 1111 23445555542 579999999999965443678999888888876 67999
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHh
Q 007218 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLA 442 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~ 442 (612)
++++||||.- +.+|+. ...+|++||++.|+
T Consensus 73 ~~~~GNHD~~----------------------------------------------~~ld~~----~~~~ql~WL~~~L~ 102 (214)
T cd07399 73 SVLAGNHDLV----------------------------------------------LALEFG----PRDEVLQWANEVLK 102 (214)
T ss_pred EEECCCCcch----------------------------------------------hhCCCC----CCHHHHHHHHHHHH
Confidence 9999999941 112221 24799999999999
Q ss_pred hccCCCCCeEEEEEccccccCCCCCccCCC-CccchhhHHHHHHHHHhC-CCeEEEecccccceeee
Q 007218 443 SVDRQKQPWLIFLAHRVLGYSSDLSYAVEG-SFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERIC 507 (612)
Q Consensus 443 ~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~-~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~ 507 (612)
+. +..++|++.|+|+ +....+..... ......+++.|++|++++ +|+++|+||+|.+.+..
T Consensus 103 ~~---~~~~~iv~~H~p~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~ 165 (214)
T cd07399 103 KH---PDRPAILTTHAYL-NCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTT 165 (214)
T ss_pred HC---CCCCEEEEecccc-cCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEE
Confidence 74 3456899999998 65543221110 000112356899999998 79999999999998875
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.66 E-value=1.9e-15 Score=157.61 Aligned_cols=181 Identities=15% Similarity=0.176 Sum_probs=115.7
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCccc--------HHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCC
Q 007218 315 NTTRQLIQDLKNIDIVFHIGDICYANGYIS--------QWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSG 386 (612)
Q Consensus 315 ~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~--------~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsg 386 (612)
.+++.+.+...+|||||++||++..+.... .+..+++.++.....+|+++++||||....+. +......
T Consensus 57 s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~---~~~~~~~ 133 (296)
T cd00842 57 SALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQ---FPPNNSP 133 (296)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccc---cCCcccc
Confidence 345555554468999999999996543211 24556666777778899999999999863221 1000000
Q ss_pred Cccccccccccc--cCCC----CCCceEEEEE-eCCEEEEEEcCCCCC-----------CCCHHHHHHHHHHHhhccCCC
Q 007218 387 GECGVLVENMFY--VPTE----NRAKFWYSTD-YGMFRFCIADTEQDW-----------REGTEQYRFIEHCLASVDRQK 448 (612)
Q Consensus 387 ge~g~~~~~~f~--~P~~----~~~~~yYsfd-~G~v~Fi~LDT~~~~-----------~~g~~Q~~WL~~~L~~~~r~~ 448 (612)
...-......|. +|.. -....||+++ .++++||+|||.... ....+|++||+++|+++.. +
T Consensus 134 ~~~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~-~ 212 (296)
T cd00842 134 SWLYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQ-A 212 (296)
T ss_pred cHHHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHH-C
Confidence 000000011111 2211 1245689988 889999999997532 1247899999999998743 3
Q ss_pred CCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCC--CeEEEecccccceeee
Q 007218 449 QPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNYERIC 507 (612)
Q Consensus 449 ~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~--VdlvlsGH~H~YeRt~ 507 (612)
...++|++|+|+ +..... . . ...++.|.+|+++|+ |.++|+||+|..+...
T Consensus 213 ~~~v~I~~HiPp-~~~~~~----~-~--~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~~ 265 (296)
T cd00842 213 GEKVWIIGHIPP-GVNSYD----T-L--ENWSERYLQIINRYSDTIAGQFFGHTHRDEFRV 265 (296)
T ss_pred CCeEEEEeccCC-CCcccc----c-c--hHHHHHHHHHHHHHHHhhheeeecccccceEEE
Confidence 345788899998 443210 0 0 122789999999997 7889999999977663
No 16
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.65 E-value=3.5e-16 Score=145.45 Aligned_cols=195 Identities=19% Similarity=0.230 Sum_probs=99.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHH-HhhhccccCCCeEEc
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFT-AQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~-~~i~~l~~~vP~~~~ 365 (612)
+||+++||+|...... .. ....+..... ..++|+||++||+++.......+.... .........+|++++
T Consensus 1 ~ri~~isD~H~~~~~~-------~~-~~~~~~~~~~-~~~~d~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (200)
T PF00149_consen 1 MRILVISDLHGGYDDD-------SD-AFRKLDEIAA-ENKPDFIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFI 71 (200)
T ss_dssp EEEEEEEBBTTTHHHH-------CH-HHHHHHHHHH-HTTTSEEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred CeEEEEcCCCCCCcch-------hH-HHHHHHHHhc-cCCCCEEEeeccccccccccccchhhhccchhhhhcccccccc
Confidence 6999999999864210 00 1122233332 378999999999997666544433322 223344568999999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccccccc-cCCC---CCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHH
Q 007218 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFY-VPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCL 441 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~-~P~~---~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L 441 (612)
+||||+...... + .......... .... ...+...........+..............+..|+...+
T Consensus 72 ~GNHD~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (200)
T PF00149_consen 72 LGNHDYYSGNSF--Y--------GFYDYQFEDYYGNYNYYYSYFNNKVIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLL 141 (200)
T ss_dssp E-TTSSHHHHHH--H--------HHHHHHHSSEEECSSEEECTESSEEEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHH
T ss_pred ccccccceeccc--c--------ccccccccccccccccccccCcceeeecccccccccccccccccccccchhcccccc
Confidence 999998631100 0 0000000000 0000 000000112222222222222211111223333333322
Q ss_pred hhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007218 442 ASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 442 ~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
....+...+++||++|+|+ ++........ ......++.+..++.+++|+++|+||+|.|
T Consensus 142 ~~~~~~~~~~~iv~~H~p~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 142 LLLEAKNDDPVIVFTHHPP-YSSSSDSSSY--GNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp HHHHEEEESEEEEEESSSS-STTSSSTHHH--SSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred cccccccccceeEEEecCC-CCcccccccc--chhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 2222356789999999999 6553321110 001123789999999999999999999987
No 17
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.65 E-value=2.3e-15 Score=153.47 Aligned_cols=161 Identities=20% Similarity=0.196 Sum_probs=103.1
Q ss_pred CCCCEEEEcCccccCCCcc---cHHH----HHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccccccc
Q 007218 325 KNIDIVFHIGDICYANGYI---SQWD----QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMF 397 (612)
Q Consensus 325 ~~pdfvl~~GDi~Y~~g~~---~~wd----~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f 397 (612)
.+||+||++||++. .|.. .+|. .|.+.+.++...+|++.++||||+.+.+... . ..-..|+..|
T Consensus 44 l~PD~vv~lGDL~d-~G~~~~~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~~-~-------~~~~rf~~~F 114 (257)
T cd08163 44 LKPDSTIFLGDLFD-GGRDWADEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGVV-L-------PVRQRFEKYF 114 (257)
T ss_pred cCCCEEEEeccccc-CCeeCcHHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCCC-H-------HHHHHHHHHh
Confidence 57999999999995 4532 3454 3344444433458999999999986421100 0 0001122233
Q ss_pred ccCCCCCCceEEEEEeCCEEEEEEcCCCCC-----CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCC
Q 007218 398 YVPTENRAKFWYSTDYGMFRFCIADTEQDW-----REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEG 472 (612)
Q Consensus 398 ~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~-----~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~ 472 (612)
. ...|+|++|+++||+|||.... ....+|.+||++.|+.. .....+|++.|+|+ |....- .+|
T Consensus 115 g-------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~--~~~~p~ILl~H~Pl-yr~~~~--~cg 182 (257)
T cd08163 115 G-------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMK--VKSKPRILLTHVPL-YRPPNT--SCG 182 (257)
T ss_pred C-------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhcc--CCCCcEEEEecccc-ccCCCC--CCC
Confidence 1 2357899999999999997421 23468999999999864 23345899999999 654221 111
Q ss_pred Ccc--------------c-hhhHHHHHHHHHhCCCeEEEecccccceee
Q 007218 473 SFA--------------E-PMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 473 ~~~--------------~-~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
... + -+..+.-..||++.++.+||+||+|.|=..
T Consensus 183 ~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~~ 231 (257)
T cd08163 183 PLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCEV 231 (257)
T ss_pred CccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCcccee
Confidence 000 0 111355567888889999999999998554
No 18
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.64 E-value=3.9e-15 Score=146.29 Aligned_cols=166 Identities=15% Similarity=0.171 Sum_probs=101.6
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCccc-HHHHHHHhhhccc-cCCCeE
Q 007218 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYIS-QWDQFTAQIEPIA-STVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~-~wd~f~~~i~~l~-~~vP~~ 363 (612)
.+||++++|+|.+..................+++++++ .+||+|+++||+++...... .+..+.+.++++. ..+|++
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~ 80 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDA-EKPDLVVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWA 80 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhh-cCCCEEEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEE
Confidence 48999999999876431100000111223445555554 68999999999997655432 2344444444443 369999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhh
Q 007218 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~ 443 (612)
+++||||.. ......|++||+++|++
T Consensus 81 ~~~GNHD~~------------------------------------------------------g~l~~~ql~wL~~~l~~ 106 (199)
T cd07383 81 ATFGNHDGY------------------------------------------------------DWIRPSQIEWFKETSAA 106 (199)
T ss_pred EECccCCCC------------------------------------------------------CCCCHHHHHHHHHHHHH
Confidence 999999921 01235899999999998
Q ss_pred cc--CCCCCeEEEEEccccccCCCC-Cc------cC--CCCccchhhHHHHHHHHHhCCCeEEEecccccceeee
Q 007218 444 VD--RQKQPWLIFLAHRVLGYSSDL-SY------AV--EGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 444 ~~--r~~~~w~Iv~~H~P~~yss~~-~~------~~--~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
.. +....+.+++.|+|+ ..... |. +. +...........+..+.+..+|+++|+||+|.++...
T Consensus 107 ~~~~~~~~~~~l~f~H~P~-~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 107 LKKKYGKPIPSLAFFHIPL-PEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred HhhccCCCCcceEEEecCh-HHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 63 234467899999987 43211 11 00 1000001112334444566799999999999987664
No 19
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.61 E-value=8.8e-15 Score=147.37 Aligned_cols=201 Identities=18% Similarity=0.227 Sum_probs=118.6
Q ss_pred EEEEecCCCCCC--CCCCcccccccChHHHHHHHHH---h-cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCe
Q 007218 289 VIIFGDMGKDEA--DGSNEYNNFQRGSLNTTRQLIQ---D-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 289 f~v~GD~g~~~~--~~~~~~~~~~~~s~~~~~~l~~---~-~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (612)
+.+++|+|.... .+.+.+ .....+.++++.+ . ..+||+|+++||+++ .+........++.++.+ ..|+
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~---g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~-~~~~~~~~~~l~~l~~l--~~~v 74 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVF---GPEWKNHTEKIKENWDNVVAPEDIVLIPGDISW-AMKLEEAKLDLAWIDAL--PGTK 74 (232)
T ss_pred CeEEEeeccCCCCCCCCccc---CccHHHHHHHHHHHHHhcCCCCCEEEEcCCCcc-CCChHHHHHHHHHHHhC--CCCe
Confidence 368899997642 111122 2222333444333 2 248999999999994 33323333334444433 3478
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCC-CceEEEEEeCCEEEEEEcCCC----CC----------
Q 007218 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR-AKFWYSTDYGMFRFCIADTEQ----DW---------- 427 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~yYsfd~G~v~Fi~LDT~~----~~---------- 427 (612)
++++||||+....... +... ++.... -..-.++.++++.|+.++... .+
T Consensus 75 ~~V~GNHD~~~~~~~~--------------~~~~--l~~~~~~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~ 138 (232)
T cd07393 75 VLLKGNHDYWWGSASK--------------LRKA--LEESRLALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVE 138 (232)
T ss_pred EEEeCCccccCCCHHH--------------HHHH--HHhcCeEEeccCcEEECCEEEEEEEeeCCCCCccccccccccch
Confidence 9999999973211000 0000 110000 000134567889999876311 11
Q ss_pred C---CCHHHHHHHHHHHhhccCC-CCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007218 428 R---EGTEQYRFIEHCLASVDRQ-KQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 428 ~---~g~~Q~~WL~~~L~~~~r~-~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
. ...+|++||++.|++.... ...++|++.|+|+ +.... ..+.+..++++++|+++|+||+|.+
T Consensus 139 ~~~~~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~-~~~~~------------~~~~~~~~~~~~~v~~vl~GH~H~~ 205 (232)
T cd07393 139 EDEKIFERELERLELSLKAAKKREKEKIKIVMLHYPP-ANENG------------DDSPISKLIEEYGVDICVYGHLHGV 205 (232)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCC-cCCCC------------CHHHHHHHHHHcCCCEEEECCCCCC
Confidence 0 1256899999999976322 2357999999998 54321 0346788899999999999999999
Q ss_pred eeeecccCceeccCCCccccCCCCCeEEEEECCC
Q 007218 504 ERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGA 537 (612)
Q Consensus 504 eRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~g 537 (612)
++..|+.. ..+|+.|+++.++
T Consensus 206 ~~~~~~~~-------------~~~gi~~~~~~~~ 226 (232)
T cd07393 206 GRDRAING-------------ERGGIRYQLVSAD 226 (232)
T ss_pred cccccccc-------------eECCEEEEEEcch
Confidence 99877642 2257777776554
No 20
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.60 E-value=1.3e-13 Score=148.46 Aligned_cols=96 Identities=21% Similarity=0.245 Sum_probs=71.9
Q ss_pred CceEEEEE-eCCEEEEEEcCCCCC-----CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccC-C--CCcc
Q 007218 405 AKFWYSTD-YGMFRFCIADTEQDW-----REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAV-E--GSFA 475 (612)
Q Consensus 405 ~~~yYsfd-~G~v~Fi~LDT~~~~-----~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~-~--~~~~ 475 (612)
+..||+|+ .++++||+|||.... ...++|++||+++|++ .+.+++||++|||+ ++....... . +..
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~---a~~k~VVVf~HHPp-~s~g~~~~Dp~~pg~~- 364 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA---SSDTLFVLFSHHTS-WSMVNELTDPVDPGEK- 364 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc---CCCCCEEEEECCCC-cccccccccccccccc-
Confidence 56799999 899999999997531 2458999999999997 34567999999998 654321110 0 000
Q ss_pred chhhHHHHHHHHHhC-CCeEEEecccccceee
Q 007218 476 EPMGRESLQKLWQKY-KVDIAVFGHVHNYERI 506 (612)
Q Consensus 476 ~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt 506 (612)
... .++|.++|++| +|.++|+||.|....+
T Consensus 365 ~~n-~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 365 RHL-GTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred ccC-HHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 111 56899999998 8999999999987655
No 21
>PF14008 Metallophos_C: Iron/zinc purple acid phosphatase-like protein C; PDB: 3KBP_B 1KBP_B 4KBP_C 2QFP_B 2QFR_A 1XZW_B.
Probab=99.54 E-value=1.5e-14 Score=114.85 Aligned_cols=62 Identities=37% Similarity=0.737 Sum_probs=42.2
Q ss_pred CCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCcEEEEE
Q 007218 527 NGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSF 588 (612)
Q Consensus 527 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v~D~f 588 (612)
++|||||+|+||+.++++..++|+|+++|..+|||.+|++.|+++|++||+++.||+|+|+|
T Consensus 1 kapVhiv~G~aG~~l~~~~~~~~~wsa~r~~~~Gy~~l~v~N~T~l~~e~i~~~~g~v~D~f 62 (62)
T PF14008_consen 1 KAPVHIVVGAAGNGLDPFPYPPPEWSAFRDSEYGYGRLTVANATHLHWEFIRSDDGSVLDEF 62 (62)
T ss_dssp TS-EEEEE--S-T----B-SS--TTEEEEE---EEEEEEE-SSSEEEEEEEETTS-T-CEE-
T ss_pred CCCEEEEECcCCCCcccccCCCCCeeeeeccccCEEEEEEEcCCeEEEEEEECCCCcEecCC
Confidence 48999999999999888888899999999999999999998999999999999999999998
No 22
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.51 E-value=5.4e-13 Score=128.90 Aligned_cols=168 Identities=16% Similarity=0.195 Sum_probs=101.5
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCC
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GN 368 (612)
++++||+|.... .+.. ..++ ..++|+|+++||+++. +.......+ +.++. ..+|+++++||
T Consensus 1 i~~~sD~H~~~~------------~~~~--~~~~-~~~~D~vv~~GDl~~~-~~~~~~~~~-~~l~~--~~~p~~~v~GN 61 (188)
T cd07392 1 ILAISDIHGDVE------------KLEA--IILK-AEEADAVIVAGDITNF-GGKEAAVEI-NLLLA--IGVPVLAVPGN 61 (188)
T ss_pred CEEEEecCCCHH------------HHHH--HHhh-ccCCCEEEECCCccCc-CCHHHHHHH-HHHHh--cCCCEEEEcCC
Confidence 578999986421 1111 2222 2689999999999954 333333333 34433 36899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCC------CCCCHHHHHHHHHHHh
Q 007218 369 HERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD------WREGTEQYRFIEHCLA 442 (612)
Q Consensus 369 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~------~~~g~~Q~~WL~~~L~ 442 (612)
||.... ..... ...+.+ .+ ..+.++++.|+.+++... .....+|++|+ +.|+
T Consensus 62 HD~~~~-----~~~~~---------~~~~~~-----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~ 119 (188)
T cd07392 62 CDTPEI-----LGLLT---------SAGLNL-----HG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLN 119 (188)
T ss_pred CCCHHH-----HHhhh---------cCcEec-----CC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhh
Confidence 997421 00000 000111 01 235678899999987532 12346889998 4444
Q ss_pred hccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007218 443 SVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 443 ~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
. ...+.+|++.|+|+ +.. +....... ...+.+.+..++++++++++|+||+|.-.
T Consensus 120 ~---~~~~~~ilv~H~pp-~~~--~~d~~~~~-~~~g~~~l~~li~~~~~~~~l~GH~H~~~ 174 (188)
T cd07392 120 N---LLAKNLILVTHAPP-YGT--AVDRVSGG-FHVGSKAIRKFIEERQPLLCICGHIHESR 174 (188)
T ss_pred c---cCCCCeEEEECCCC-cCC--cccccCCC-CccCCHHHHHHHHHhCCcEEEEecccccc
Confidence 3 33456899999998 653 11110000 01236789999999999999999999853
No 23
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.44 E-value=3.7e-12 Score=135.95 Aligned_cols=97 Identities=19% Similarity=0.148 Sum_probs=66.9
Q ss_pred CceEEEEE-eCCE--EEEEEcCCCCC-----------CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCC-Ccc
Q 007218 405 AKFWYSTD-YGMF--RFCIADTEQDW-----------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDL-SYA 469 (612)
Q Consensus 405 ~~~yYsfd-~G~v--~Fi~LDT~~~~-----------~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~-~~~ 469 (612)
+..||+|+ .|++ |||+||+.... ..+.+|++||+++|+.+. .+.+++|+++|+|+ .+... ...
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~-a~~p~VVV~hHpPi-~t~gi~~md 368 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQ-ADGQLMIIAAHIPI-AVSPIGSEM 368 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCc-CCCceEEEEeCCCc-ccCCccchh
Confidence 45699999 5845 99999987511 135899999999999863 25688999999998 64221 100
Q ss_pred CCC--------CccchhhHHHHHHHHHhC-CCeEEEecccccc
Q 007218 470 VEG--------SFAEPMGRESLQKLWQKY-KVDIAVFGHVHNY 503 (612)
Q Consensus 470 ~~~--------~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~Y 503 (612)
.-. .......-.+|..+|++| +|-++|+||.|.-
T Consensus 369 ~w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 369 EWWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hhccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 000 000111124899999998 7999999999973
No 24
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.44 E-value=3e-12 Score=132.29 Aligned_cols=184 Identities=17% Similarity=0.233 Sum_probs=116.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+||+.++|.|..... ......+.+++++. .+||+|+++||++.. |....++...+.++......|+++
T Consensus 1 ~~i~~isD~H~~~~~---------~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 70 (301)
T COG1409 1 MRIAHISDLHLGALG---------VDSEELLEALLAAIEQLKPDLLVVTGDLTND-GEPEEYRRLKELLARLELPAPVIV 70 (301)
T ss_pred CeEEEEecCcccccc---------cchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CCHHHHHHHHHHHhhccCCCceEe
Confidence 479999999987310 11233444444442 578999999999954 777677777777775556789999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEe-CCEEEEEEcCCCCC----CCCHHHHHHHHH
Q 007218 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY-GMFRFCIADTEQDW----REGTEQYRFIEH 439 (612)
Q Consensus 365 ~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~-G~v~Fi~LDT~~~~----~~g~~Q~~WL~~ 439 (612)
++||||....... .+...+.. ....+-.... +.++++.+|+.... ..+..|++||++
T Consensus 71 vpGNHD~~~~~~~--------------~~~~~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~ 132 (301)
T COG1409 71 VPGNHDARVVNGE--------------AFSDQFFN----RYAVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEE 132 (301)
T ss_pred eCCCCcCCchHHH--------------Hhhhhhcc----cCcceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHH
Confidence 9999998643211 00111100 0011111222 67899999998642 356899999999
Q ss_pred HHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCC--CeEEEecccccc
Q 007218 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNY 503 (612)
Q Consensus 440 ~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~--VdlvlsGH~H~Y 503 (612)
.|++........+|+++|+|+ .......... . ......+..++..++ |+++|+||.|.-
T Consensus 133 ~l~~~~~~~~~~~v~~~hh~~-~~~~~~~~~~--~--l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 133 ALAAAPERAKDTVVVLHHHPL-PSPGTGVDRV--A--LRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred HHHhCccccCceEEEecCCCC-CCCCCcccee--e--eecchhHHHHHHhcCCceEEEEeCccccc
Confidence 999853221125677777776 4332221111 1 111456777888887 999999999986
No 25
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.43 E-value=2e-12 Score=128.95 Aligned_cols=172 Identities=17% Similarity=0.149 Sum_probs=100.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+||++++|+|..... ....++++++. ..+||+|+++||+++...... +.+.+.++.+....|++.
T Consensus 2 ~~i~~~sDlH~~~~~-----------~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~~~--~~~~~~l~~l~~~~~v~~ 68 (223)
T cd07385 2 LRIAHLSDLHLGPFV-----------SRERLERLVEKINALKPDLVVLTGDLVDGSVDVL--ELLLELLKKLKAPLGVYA 68 (223)
T ss_pred CEEEEEeecCCCccC-----------CHHHHHHHHHHHhccCCCEEEEcCcccCCcchhh--HHHHHHHhccCCCCCEEE
Confidence 799999999986421 11223333332 257999999999996543322 345555666666799999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhc
Q 007218 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASV 444 (612)
Q Consensus 365 ~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~ 444 (612)
++||||+.......+. + ......+.+- .+.+..++.++..+.++--... ....+++.+.++..
T Consensus 69 v~GNHD~~~~~~~~~~-------~--~l~~~~v~~L----~~~~~~~~~~~~~i~i~G~~~~----~~~~~~~~~~~~~~ 131 (223)
T cd07385 69 VLGNHDYYSGDEENWI-------E--ALESAGITVL----RNESVEISVGGATIGIAGVDDG----LGRRPDLEKALKGL 131 (223)
T ss_pred ECCCcccccCchHHHH-------H--HHHHcCCEEe----ecCcEEeccCCeEEEEEeccCc----cccCCCHHHHHhCC
Confidence 9999998532110000 0 0000011111 1223445666544443321111 12345666777664
Q ss_pred cCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCc
Q 007218 445 DRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQN 512 (612)
Q Consensus 445 ~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~ 512 (612)
.+..+.|++.|.|. + .+. +.+.++|++++||+|..|...|....
T Consensus 132 --~~~~~~I~l~H~P~-~-----------------~~~----~~~~~~dl~l~GHtHggqi~~~~~~~ 175 (223)
T cd07385 132 --DEDDPNILLAHQPD-T-----------------AEE----AAAWGVDLQLSGHTHGGQIRLPGIGP 175 (223)
T ss_pred --CCCCCEEEEecCCC-h-----------------hHH----hcccCccEEEeccCCCCEEecccccc
Confidence 34567999999985 1 111 15679999999999999988776543
No 26
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.42 E-value=5.1e-12 Score=127.86 Aligned_cols=185 Identities=19% Similarity=0.236 Sum_probs=102.4
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEc
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~ 365 (612)
||++++|+|.... .+ ...+.++++++. ..++|+|+++||++.. . .+..++++.+..+ ..+|++.+
T Consensus 1 ki~~iSDlH~~~~----~~-----~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~-~--~~~~~~~~~l~~~-~~~pv~~v 67 (239)
T TIGR03729 1 KIAFSSDLHIDLN----HF-----DTEEMLETLAQYLKKQKIDHLHIAGDISND-F--QRSLPFIEKLQEL-KGIKVTFN 67 (239)
T ss_pred CEEEEEeecCCCC----CC-----CHHHHHHHHHHHHHhcCCCEEEECCccccc-h--hhHHHHHHHHHHh-cCCcEEEE
Confidence 5899999997421 11 111223333332 1579999999999943 2 2223444444432 46899999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCC-------------------
Q 007218 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQD------------------- 426 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~------------------- 426 (612)
+||||+..... +. + ....+. + ....+.++.+..++++|+.++...+
T Consensus 68 ~GNHD~~~~~~---~~------~----~~~~~~-~-~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~ 132 (239)
T TIGR03729 68 AGNHDMLKDLT---YE------E----IESNDS-P-LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSF 132 (239)
T ss_pred CCCCCCCCCCC---HH------H----HHhccc-h-hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcE
Confidence 99999742110 00 0 000000 0 0001122233336677777773111
Q ss_pred -------CC-----CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCC-Cc---cchhhHHHHHHHHHhC
Q 007218 427 -------WR-----EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEG-SF---AEPMGRESLQKLWQKY 490 (612)
Q Consensus 427 -------~~-----~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~-~~---~~~~~r~~l~~ll~k~ 490 (612)
.. ...+|++||++.|++.. ...+|++.|+|+ .......+... .+ ....+.+.|..+++++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~---~~~~ivvtH~pP-~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~ 208 (239)
T TIGR03729 133 WFDRRIKRPMSDPERTAIVLKQLKKQLNQLD---NKQVIFVTHFVP-HRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKY 208 (239)
T ss_pred EeecccCCCCChHHHHHHHHHHHHHHHHhcC---CCCEEEEEcccc-hHHHhcCCCCCcchhhhhhccChHHHHHHHHHh
Confidence 10 12678999999998752 234788888876 32100000000 00 0112357899999999
Q ss_pred CCeEEEecccccce
Q 007218 491 KVDIAVFGHVHNYE 504 (612)
Q Consensus 491 ~VdlvlsGH~H~Ye 504 (612)
+|+++|+||+|.-.
T Consensus 209 ~v~~~i~GH~H~~~ 222 (239)
T TIGR03729 209 EIKDVIFGHLHRRF 222 (239)
T ss_pred CCCEEEECCccCCC
Confidence 99999999999854
No 27
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.40 E-value=2.7e-12 Score=119.17 Aligned_cols=125 Identities=19% Similarity=0.279 Sum_probs=83.1
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccC-CCeEEc
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST-VPYMIA 365 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~-vP~~~~ 365 (612)
|+.++|+|.+....... ......++++++. ..++|+|+++||+++. +...+|+.+.+.++.+... +|++.+
T Consensus 1 il~isD~Hl~~~~~~~~-----~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPEL-----LALLSLLDRLLAEIKALDPDLVVITGDLTQR-GLPEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhH-----HHHHHHHHHHHHHHhccCCCEEEECCCCCCC-CCHHHHHHHHHHHHHccccCCcEEEe
Confidence 57899999876421110 0011112223322 2679999999999964 4456677776666665543 699999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhcc
Q 007218 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~ 445 (612)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999993
Q ss_pred CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceee
Q 007218 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 446 r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
|+++|+|+ +..... .... . . .++.+.+++.+++++++|+||+|.....
T Consensus 81 -------iv~~Hhp~-~~~~~~-~~~~-~--~-~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 -------IVVLHHPL-VPPPGS-GRER-L--L-DAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred -------EEEecCCC-CCCCcc-cccc-C--C-CHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 88889888 543221 1111 1 1 2678999999999999999999996544
No 28
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.33 E-value=5.4e-11 Score=118.65 Aligned_cols=175 Identities=14% Similarity=0.164 Sum_probs=103.4
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007218 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
.-|+++++|+|.+ ...++++++.. .++|+|+++||+++.......+..+++.+..+ .+|++
T Consensus 4 ~~kIl~iSDiHgn---------------~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~~~~~~~~l~~l~~l--~~pv~ 66 (224)
T cd07388 4 VRYVLATSNPKGD---------------LEALEKLVGLAPETGADAIVLIGNLLPKAAKSEDYAAFFRILGEA--HLPTF 66 (224)
T ss_pred eeEEEEEEecCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCceE
Confidence 3689999999853 23445554432 57999999999996432333344455555433 47999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCC-CCCCceEEEEEe-CCEEEEEEcCCCCC--CCCHHHH----H
Q 007218 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPT-ENRAKFWYSTDY-GMFRFCIADTEQDW--REGTEQY----R 435 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~-~~~~~~yYsfd~-G~v~Fi~LDT~~~~--~~g~~Q~----~ 435 (612)
+++||||..-. .+.. ..+.....+|. ...... ...+ |++.|+.++..... ...++|. .
T Consensus 67 ~V~GNhD~~v~---~~l~---------~~~~~~~~~p~~~~lh~~--~~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~ 132 (224)
T cd07388 67 YVPGPQDAPLW---EYLR---------EAYNAELVHPEIRNVHET--FAFWRGPYLVAGVGGEIADEGEPEEHEALRYPA 132 (224)
T ss_pred EEcCCCChHHH---HHHH---------HHhcccccCccceecCCC--eEEecCCeEEEEecCCcCCCCCcCHHHHhhhhh
Confidence 99999996300 0000 00000000111 000111 2344 66999999866432 2344542 5
Q ss_pred HHHH-HHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccc
Q 007218 436 FIEH-CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVH 501 (612)
Q Consensus 436 WL~~-~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H 501 (612)
||.+ .|+...+...+..|++.|.|+ |..+. ...|.+.+..++++++..+++|||+|
T Consensus 133 ~~~~~~l~~~~~~~~~~~VLv~H~PP-~g~g~---------~h~GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 133 WVAEYRLKALWELKDYRKVFLFHTPP-YHKGL---------NEQGSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred hHHHHHHHHHHhCCCCCeEEEECCCC-CCCCC---------CccCHHHHHHHHHHhCCCEEEEcCCc
Confidence 6433 222221123457899999999 76631 12346789999999999999999999
No 29
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.30 E-value=2.3e-11 Score=120.81 Aligned_cols=197 Identities=12% Similarity=0.104 Sum_probs=108.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCC-cccHHHHHHHhhhccc-cCCCeE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIA-STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g-~~~~wd~f~~~i~~l~-~~vP~~ 363 (612)
||++++|+|.+.......-........++++++++. ..++|+|+++||++.... ....+..+.+.++.+. ..+|++
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 80 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPVF 80 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCEE
Confidence 689999999875421110000001123455555543 258999999999996543 2234556666666554 479999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccC---CCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHH
Q 007218 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVP---TENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHC 440 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P---~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~ 440 (612)
+++||||....... +.. ......+..- ..........++.+++.|+.++..... ....+.++++..
T Consensus 81 ~~~GNHD~~~~~~~--~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~ 149 (223)
T cd00840 81 IIAGNHDSPSRLGA--LSP--------LLALSGLHLVGVEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELR 149 (223)
T ss_pred EecCCCCCcccccc--ccc--------hHhhCcEEEEcccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHH
Confidence 99999998642210 000 0000001000 001112233345556888888764322 123344555555
Q ss_pred HhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceee
Q 007218 441 LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 441 L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
+... .+..+.|++.|.|+ ...... .. .. .......+...++|++++||.|..+..
T Consensus 150 ~~~~--~~~~~~Il~~H~~~-~~~~~~---~~---~~--~~~~~~~~~~~~~d~v~~GH~H~~~~~ 204 (223)
T cd00840 150 PRPL--DPDDFNILLLHGGV-AGAGPS---DS---ER--APFVPEALLPAGFDYVALGHIHRPQII 204 (223)
T ss_pred hhcc--CCCCcEEEEEeeee-ecCCCC---cc---cc--cccCcHhhcCcCCCEEECCCcccCeee
Confidence 5543 45667999999997 332211 00 00 122334456788999999999997643
No 30
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.29 E-value=1.3e-11 Score=117.59 Aligned_cols=149 Identities=17% Similarity=0.189 Sum_probs=85.0
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCC
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGN 368 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GN 368 (612)
|+++||+|.+.... ...+.+.+. ..++|+|+++||+++.. ....+.. ..+......|+++++||
T Consensus 1 ~~~iSDlH~~~~~~-----------~~~~~~~~~-~~~~d~li~~GDi~~~~-~~~~~~~---~~~~~~~~~~v~~v~GN 64 (166)
T cd07404 1 IQYLSDLHLEFEDN-----------LADLLNFPI-APDADILVLAGDIGYLT-DAPRFAP---LLLALKGFEPVIYVPGN 64 (166)
T ss_pred CceEccccccCccc-----------cccccccCC-CCCCCEEEECCCCCCCc-chHHHHH---HHHhhcCCccEEEeCCC
Confidence 57899999764210 001111112 26899999999999543 2222222 22233456899999999
Q ss_pred CccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCC
Q 007218 369 HERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQK 448 (612)
Q Consensus 369 HD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~ 448 (612)
||+.. +|. + ...||.+... +.++.+|+.++++
T Consensus 65 HD~~~----------------------~~~--G---~~~w~~~~~~---------------~~~~~~~~~~d~~------ 96 (166)
T cd07404 65 HEFYV----------------------RII--G---TTLWSDISLF---------------GEAAARMRMNDFR------ 96 (166)
T ss_pred cceEE----------------------EEE--e---eecccccCcc---------------chHHHHhCCCCCC------
Confidence 99730 010 0 0123333221 1245556555544
Q ss_pred CCeEEEEEccccccCCCC-CccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007218 449 QPWLIFLAHRVLGYSSDL-SYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 449 ~~w~Iv~~H~P~~yss~~-~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
+.+|++.|+|+ +.... +....+.. ...+++.+..++++++|+++++||+|...
T Consensus 97 -~~~vv~~HhpP-~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~v~~~i~GH~H~~~ 150 (166)
T cd07404 97 -GKTVVVTHHAP-SPLSLAPQYGDSLV-NAAFAVDLDDLILADPIDLWIHGHTHFNF 150 (166)
T ss_pred -CCEEEEeCCCC-CccccCccccCCCc-chhhhhccHhHHhhcCCCEEEECCccccc
Confidence 34788889988 65432 11111111 11225668888889999999999999864
No 31
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.23 E-value=1.9e-10 Score=118.69 Aligned_cols=170 Identities=16% Similarity=0.167 Sum_probs=95.1
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCe
Q 007218 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (612)
..+||++++|+|.+... + ...++++++. ..+||+|+++||+++.+ ....++.+.+.++.+.+..|+
T Consensus 48 ~~~rI~~lSDlH~~~~~---------~--~~~l~~~v~~i~~~~pDlVli~GD~~d~~-~~~~~~~~~~~L~~L~~~~pv 115 (271)
T PRK11340 48 APFKILFLADLHYSRFV---------P--LSLISDAIALGIEQKPDLILLGGDYVLFD-MPLNFSAFSDVLSPLAECAPT 115 (271)
T ss_pred CCcEEEEEcccCCCCcC---------C--HHHHHHHHHHHHhcCCCEEEEccCcCCCC-ccccHHHHHHHHHHHhhcCCE
Confidence 34999999999975321 1 1223333332 26899999999999522 223445666667776667899
Q ss_pred EEccCCCccCCCCCC-CCCCCCCCCCccccccccccccCCCCCCceEEEEEeCC--EEEEEEcCCCCCCCCHHHHHHHHH
Q 007218 363 MIASGNHERDWPGTG-SFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGM--FRFCIADTEQDWREGTEQYRFIEH 439 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~-~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~--v~Fi~LDT~~~~~~g~~Q~~WL~~ 439 (612)
++++||||+...... ..+. + .....-+.+- .+....+..++ +.++.++.... +... ..+
T Consensus 116 ~~V~GNHD~~~~~~~~~~~~------~--~l~~~gi~lL----~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~ 177 (271)
T PRK11340 116 FACFGNHDRPVGTEKNHLIG------E--TLKSAGITVL----FNQATVIATPNRQFELVGTGDLWA---GQCK---PPP 177 (271)
T ss_pred EEecCCCCcccCccchHHHH------H--HHHhcCcEEe----eCCeEEEeeCCcEEEEEEecchhc---cCCC---hhH
Confidence 999999997421100 0000 0 0000001111 12344455543 55666653211 1111 111
Q ss_pred HHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccC
Q 007218 440 CLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQ 511 (612)
Q Consensus 440 ~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~ 511 (612)
.++ +....|++.|.|- + . +.+.+.++||+||||+|.-|...|..+
T Consensus 178 ~~~-----~~~~~IlL~H~P~-~-----------------~----~~~~~~~~dL~lsGHTHGGQi~lP~~~ 222 (271)
T PRK11340 178 ASE-----ANLPRLVLAHNPD-S-----------------K----EVMRDEPWDLMLCGHTHGGQLRVPLVG 222 (271)
T ss_pred hcC-----CCCCeEEEEcCCC-h-----------------h----HhhccCCCCEEEeccccCCeEEccccC
Confidence 222 1346899999994 1 0 112457899999999999998877643
No 32
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.12 E-value=9e-10 Score=102.99 Aligned_cols=152 Identities=19% Similarity=0.336 Sum_probs=90.2
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+||+++||+|... ..++++++...++|+|+++||++.. .++.+.++.+ |++++.
T Consensus 1 Mki~~~sD~H~~~---------------~~~~~~~~~~~~~d~vi~~GDi~~~-------~~~~~~~~~~----~~~~v~ 54 (156)
T PF12850_consen 1 MKIAVISDLHGNL---------------DALEAVLEYINEPDFVIILGDIFDP-------EEVLELLRDI----PVYVVR 54 (156)
T ss_dssp EEEEEEE--TTTH---------------HHHHHHHHHHTTESEEEEES-SCSH-------HHHHHHHHHH----EEEEE-
T ss_pred CEEEEEeCCCCCh---------------hHHHHHHHHhcCCCEEEECCCchhH-------HHHHHHHhcC----CEEEEe
Confidence 5899999999752 2345555554679999999999841 4555555554 999999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhc-c
Q 007218 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASV-D 445 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~-~ 445 (612)
||||... + ..... ... +... .
T Consensus 55 GNHD~~~------~-------------~~~~~------~~~---------------------------------~~~~~~ 76 (156)
T PF12850_consen 55 GNHDNWA------F-------------PNEND------EEY---------------------------------LLDALR 76 (156)
T ss_dssp -CCHSTH------H-------------HSEEC------TCS---------------------------------SHSEEE
T ss_pred CCccccc------c-------------hhhhh------ccc---------------------------------ccccee
Confidence 9999631 1 00000 000 1110 0
Q ss_pred CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCC
Q 007218 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGS 525 (612)
Q Consensus 446 r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~ 525 (612)
..-..+.|++.|... +... .. .+.+..++...+++++|+||.|..+...
T Consensus 77 ~~~~~~~i~~~H~~~-~~~~-----------~~-~~~~~~~~~~~~~~~~~~GH~H~~~~~~------------------ 125 (156)
T PF12850_consen 77 LTIDGFKILLSHGHP-YDVQ-----------WD-PAELREILSRENVDLVLHGHTHRPQVFK------------------ 125 (156)
T ss_dssp EEETTEEEEEESSTS-SSST-----------TT-HHHHHHHHHHTTSSEEEESSSSSEEEEE------------------
T ss_pred eeecCCeEEEECCCC-cccc-----------cC-hhhhhhhhcccCCCEEEcCCcccceEEE------------------
Confidence 012356888888765 3321 11 4567788889999999999999977653
Q ss_pred CCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEE
Q 007218 526 LNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTA 566 (612)
Q Consensus 526 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v 566 (612)
.+++.++..|+-+... . ...-+|.++++
T Consensus 126 ~~~~~~~~~Gs~~~~~------------~-~~~~~~~i~~~ 153 (156)
T PF12850_consen 126 IGGIHVINPGSIGGPR------------H-GDQSGYAILDI 153 (156)
T ss_dssp ETTEEEEEE-GSSS-S------------S-SSSEEEEEEEE
T ss_pred ECCEEEEECCcCCCCC------------C-CCCCEEEEEEE
Confidence 1467778787755431 0 11567888887
No 33
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.07 E-value=8.5e-09 Score=105.59 Aligned_cols=88 Identities=15% Similarity=0.280 Sum_probs=57.6
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccc--------cChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhc
Q 007218 284 DSLQQVIIFGDMGKDEADGSNEYNNFQ--------RGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~--------~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 355 (612)
++.||++.++|||.+...++.-.+.++ ....+.++++++ .++||||+++||+++.......-..++..++|
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~-sE~PDlVVfTGD~i~g~~t~Da~~sl~kAvaP 129 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLA-SEKPDLVVFTGDNIFGHSTQDAATSLMKAVAP 129 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHh-ccCCCEEEEeCCcccccccHhHHHHHHHHhhh
Confidence 455999999999997642211111111 112345677776 48999999999999763322111234556666
Q ss_pred -cccCCCeEEccCCCccC
Q 007218 356 -IASTVPYMIASGNHERD 372 (612)
Q Consensus 356 -l~~~vP~~~~~GNHD~~ 372 (612)
+..++||.++.||||-.
T Consensus 130 ~I~~~IPwA~~lGNHDde 147 (379)
T KOG1432|consen 130 AIDRKIPWAAVLGNHDDE 147 (379)
T ss_pred HhhcCCCeEEEecccccc
Confidence 45789999999999965
No 34
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.06 E-value=2e-09 Score=96.22 Aligned_cols=96 Identities=29% Similarity=0.425 Sum_probs=69.4
Q ss_pred cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCC
Q 007218 324 LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTEN 403 (612)
Q Consensus 324 ~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~ 403 (612)
..++++|+++||+++... ...+..+..........+|+++++||||
T Consensus 24 ~~~~~~vi~~GD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~GNHD--------------------------------- 69 (131)
T cd00838 24 AEKPDFVLVLGDLVGDGP-DPEEVLAAALALLLLLGIPVYVVPGNHD--------------------------------- 69 (131)
T ss_pred ccCCCEEEECCcccCCCC-CchHHHHHHHHHhhcCCCCEEEeCCCce---------------------------------
Confidence 378999999999996544 3444443323334456899999999999
Q ss_pred CCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHH
Q 007218 404 RAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESL 483 (612)
Q Consensus 404 ~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l 483 (612)
|++.|.|+ +....... .. ... .++.+
T Consensus 70 -------------------------------------------------i~~~H~~~-~~~~~~~~-~~--~~~-~~~~~ 95 (131)
T cd00838 70 -------------------------------------------------ILLTHGPP-YDPLDELS-PD--EDP-GSEAL 95 (131)
T ss_pred -------------------------------------------------EEEeccCC-CCCchhhc-cc--chh-hHHHH
Confidence 89999998 54432111 11 011 26788
Q ss_pred HHHHHhCCCeEEEecccccceeee
Q 007218 484 QKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 484 ~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
..++.+.+++++|+||.|.+.+..
T Consensus 96 ~~~~~~~~~~~~~~GH~H~~~~~~ 119 (131)
T cd00838 96 LELLEKYGVDLVLSGHTHVYERRE 119 (131)
T ss_pred HHHHHHhCCCEEEeCCeecccccc
Confidence 899999999999999999998874
No 35
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=98.96 E-value=5.9e-09 Score=107.71 Aligned_cols=78 Identities=10% Similarity=0.095 Sum_probs=56.3
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007218 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
...++++.++|+|.... .....+.+.++.+ ..||+|+.+||++.. .....+....+.++++.+..+++
T Consensus 42 ~~~~~iv~lSDlH~~~~---------~~~~~~~~~~i~~--~~~DlivltGD~~~~-~~~~~~~~~~~~L~~L~~~~gv~ 109 (284)
T COG1408 42 LQGLKIVQLSDLHSLPF---------REEKLALLIAIAN--ELPDLIVLTGDYVDG-DRPPGVAALALFLAKLKAPLGVF 109 (284)
T ss_pred cCCeEEEEeehhhhchh---------hHHHHHHHHHHHh--cCCCEEEEEeeeecC-CCCCCHHHHHHHHHhhhccCCEE
Confidence 34589999999998642 1112334444444 567999999999963 22344567777788888899999
Q ss_pred EccCCCccCC
Q 007218 364 IASGNHERDW 373 (612)
Q Consensus 364 ~~~GNHD~~~ 373 (612)
++.||||+..
T Consensus 110 av~GNHd~~~ 119 (284)
T COG1408 110 AVLGNHDYGV 119 (284)
T ss_pred EEeccccccc
Confidence 9999999864
No 36
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.90 E-value=1.5e-08 Score=95.27 Aligned_cols=59 Identities=17% Similarity=0.458 Sum_probs=42.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccC
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~G 367 (612)
|++++||+|.. ...++++++...++|.|+++||++.... ... +....|++.+.|
T Consensus 1 ~i~~isD~H~~---------------~~~~~~~~~~~~~~d~ii~~GD~~~~~~-~~~----------~~~~~~~~~V~G 54 (155)
T cd00841 1 KIGVISDTHGS---------------LELLEKALELFGDVDLIIHAGDVLYPGP-LNE----------LELKAPVIAVRG 54 (155)
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhcCCCEEEECCccccccc-cch----------hhcCCcEEEEeC
Confidence 58999999854 2345566665555999999999995432 211 234578999999
Q ss_pred CCccC
Q 007218 368 NHERD 372 (612)
Q Consensus 368 NHD~~ 372 (612)
|||..
T Consensus 55 NhD~~ 59 (155)
T cd00841 55 NCDGE 59 (155)
T ss_pred CCCCc
Confidence 99974
No 37
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.82 E-value=2.4e-08 Score=91.90 Aligned_cols=117 Identities=20% Similarity=0.336 Sum_probs=75.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccC
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~G 367 (612)
||+++||+|.... .++ ..++|+|+++||++. .+...+++.+.+.++.+. ..++++++|
T Consensus 1 ~i~~isD~H~~~~-------------------~~~-~~~~D~vi~~GD~~~-~~~~~~~~~~~~~l~~~~-~~~~~~v~G 58 (135)
T cd07379 1 RFVCISDTHSRHR-------------------TIS-IPDGDVLIHAGDLTE-RGTLEELQKFLDWLKSLP-HPHKIVIAG 58 (135)
T ss_pred CEEEEeCCCCCCC-------------------cCc-CCCCCEEEECCCCCC-CCCHHHHHHHHHHHHhCC-CCeEEEEEC
Confidence 5899999995420 111 267999999999994 344444555555555442 123578999
Q ss_pred CCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCC
Q 007218 368 NHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQ 447 (612)
Q Consensus 368 NHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~ 447 (612)
|||... . .
T Consensus 59 NHD~~~-------------------------------~--------------------------------------~--- 66 (135)
T cd07379 59 NHDLTL-------------------------------D--------------------------------------P--- 66 (135)
T ss_pred CCCCcC-------------------------------C--------------------------------------C---
Confidence 999630 0 1
Q ss_pred CCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007218 448 KQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 448 ~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
..+.|++.|.|+ +....... . ....+.+.+..++++++++++|+||+|...
T Consensus 67 -~~~~ilv~H~~p-~~~~~~~~-~---~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 67 -EDTDILVTHGPP-YGHLDLVS-S---GQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred -CCCEEEEECCCC-CcCccccc-c---CcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 124688889998 66432111 0 011224577888889999999999999964
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.75 E-value=1.5e-07 Score=94.53 Aligned_cols=64 Identities=20% Similarity=0.342 Sum_probs=41.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+|++++||+|.... . ... +.++. .+||+|+++||++.. . .++.+.+..+ ..|+++++
T Consensus 1 ~rIa~isDiHg~~~----------~---~~~-~~l~~-~~pD~Vl~~GDi~~~-~-----~~~~~~l~~l--~~p~~~V~ 57 (238)
T cd07397 1 LRIAIVGDVHGQWD----------L---EDI-KALHL-LQPDLVLFVGDFGNE-S-----VQLVRAISSL--PLPKAVIL 57 (238)
T ss_pred CEEEEEecCCCCch----------H---HHH-HHHhc-cCCCEEEECCCCCcC-h-----HHHHHHHHhC--CCCeEEEc
Confidence 58999999995421 1 111 23332 579999999999832 1 1233334332 46899999
Q ss_pred CCCccCC
Q 007218 367 GNHERDW 373 (612)
Q Consensus 367 GNHD~~~ 373 (612)
||||..+
T Consensus 58 GNHD~~~ 64 (238)
T cd07397 58 GNHDAWY 64 (238)
T ss_pred CCCcccc
Confidence 9999865
No 39
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=98.73 E-value=4.5e-08 Score=99.22 Aligned_cols=182 Identities=17% Similarity=0.233 Sum_probs=94.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCC-Cc---ccHHHHHHHhhhccccC-C
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYAN-GY---ISQWDQFTAQIEPIAST-V 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~-g~---~~~wd~f~~~i~~l~~~-v 360 (612)
+|+++++|+|.+... +...+.+.+.++. ..++|+|+++||++..- |. ........+.++.+... +
T Consensus 1 M~i~~iSDlHl~~~~---------~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~g~ 71 (241)
T PRK05340 1 MPTLFISDLHLSPER---------PAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDPSPFAREIAAALKALSDSGV 71 (241)
T ss_pred CcEEEEeecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEccceeccccccCcCCHHHHHHHHHHHHHHHcCC
Confidence 479999999986431 1112223333322 35799999999999521 11 12223445555655544 8
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHH
Q 007218 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHC 440 (612)
Q Consensus 361 P~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~ 440 (612)
|++.+.||||..... .+. .++|+ -.+|. ...++.++.++++.-.-.. ......|+++++.
T Consensus 72 ~v~~v~GNHD~~~~~--~~~------~~~g~-----~~l~~------~~~~~~~g~~i~l~HGd~~-~~~d~~y~~~r~~ 131 (241)
T PRK05340 72 PCYFMHGNRDFLLGK--RFA------KAAGM-----TLLPD------PSVIDLYGQRVLLLHGDTL-CTDDKAYQRFRRK 131 (241)
T ss_pred eEEEEeCCCchhhhH--HHH------HhCCC-----EEeCC------cEEEEECCEEEEEECCccc-ccCCHHHHHHHHH
Confidence 999999999974210 000 00111 01111 2346667776666543221 1123555555555
Q ss_pred HhhccCCCCCeEEEEEccccccCCCC------------C-ccCCCCccchhhHHHHHHHHHhCCCeEEEeccccccee
Q 007218 441 LASVDRQKQPWLIFLAHRVLGYSSDL------------S-YAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (612)
Q Consensus 441 L~~~~r~~~~w~Iv~~H~P~~yss~~------------~-~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeR 505 (612)
+.. ||...+.|.++ +.... . ......+.... .+.+.+++++++++++++||.|.-..
T Consensus 132 ~r~------~~~~~~~~~~p-~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 132 VRN------PWLQWLFLALP-LSIRLRIAAKMRAKSKAANQSKSLEIMDVN-PEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HhC------HHHHHHHHhCC-HHHHHHHHHHHHHHHHHhcCCCcccccCCC-HHHHHHHHHHhCCCEEEECcccCcce
Confidence 543 12233333333 21100 0 00000011111 45788899999999999999998654
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.72 E-value=1.8e-06 Score=83.55 Aligned_cols=65 Identities=17% Similarity=0.324 Sum_probs=42.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccC
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASG 367 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~G 367 (612)
+++++||+|.+.... .....+.+++++ .++|.|+|+||++. . +..+.++.+ ..|++.+.|
T Consensus 1 ~i~viSDtHl~~~~~---------~~~~~~~~~~~~-~~~d~iih~GDi~~----~----~~~~~l~~~--~~~~~~V~G 60 (178)
T cd07394 1 LVLVIGDLHIPHRAS---------DLPAKFKKLLVP-GKIQHVLCTGNLCS----K----ETYDYLKTI--APDVHIVRG 60 (178)
T ss_pred CEEEEEecCCCCCch---------hhHHHHHHHhcc-CCCCEEEECCCCCC----H----HHHHHHHhh--CCceEEEEC
Confidence 478999999654211 112345555554 57999999999984 1 222333332 237899999
Q ss_pred CCccC
Q 007218 368 NHERD 372 (612)
Q Consensus 368 NHD~~ 372 (612)
|||..
T Consensus 61 N~D~~ 65 (178)
T cd07394 61 DFDEN 65 (178)
T ss_pred CCCcc
Confidence 99963
No 41
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=98.71 E-value=4.3e-08 Score=95.33 Aligned_cols=48 Identities=15% Similarity=0.283 Sum_probs=33.9
Q ss_pred CCCCEEEEcCccccCCCc--ccHHHHHHHhhhcc---ccCCCeEEccCCCccC
Q 007218 325 KNIDIVFHIGDICYANGY--ISQWDQFTAQIEPI---ASTVPYMIASGNHERD 372 (612)
Q Consensus 325 ~~pdfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l---~~~vP~~~~~GNHD~~ 372 (612)
.+||+|+++||+++.... ..+|.++.+.+.++ ...+|++.++||||..
T Consensus 41 l~PD~Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG 93 (195)
T cd08166 41 VQPDIVIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIG 93 (195)
T ss_pred cCCCEEEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcC
Confidence 589999999999965432 22354444444333 3468999999999986
No 42
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.71 E-value=3.6e-07 Score=86.39 Aligned_cols=63 Identities=17% Similarity=0.317 Sum_probs=42.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+|++++||+|.... ..+.+.++++...++|.|+++||++. ....+.++.+ ..|++.+.
T Consensus 1 m~i~viSD~H~~~~------------~~~~~~~~~~~~~~~d~ii~~GD~~~--------~~~~~~l~~~--~~~~~~V~ 58 (158)
T TIGR00040 1 MKILVISDTHGPLR------------ATELPVELFNLESNVDLVIHAGDLTS--------PFVLKEFEDL--AAKVIAVR 58 (158)
T ss_pred CEEEEEecccCCcc------------hhHhHHHHHhhccCCCEEEEcCCCCC--------HHHHHHHHHh--CCceEEEc
Confidence 48999999995421 12344455554348999999999981 1233333332 35899999
Q ss_pred CCCcc
Q 007218 367 GNHER 371 (612)
Q Consensus 367 GNHD~ 371 (612)
||||.
T Consensus 59 GN~D~ 63 (158)
T TIGR00040 59 GNNDG 63 (158)
T ss_pred cCCCc
Confidence 99996
No 43
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.69 E-value=2e-07 Score=87.34 Aligned_cols=183 Identities=16% Similarity=0.200 Sum_probs=95.2
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
++.+++|.|....-. .+.+.+.++....=++|.++ ...-|.|+..|||+.+...+.. ..=++.+..+- .+ -+
T Consensus 2 ~iyaiaDLHLa~~~p-KpM~vFGe~W~gh~ekI~k~W~~~v~~eDiVllpGDiSWaM~l~ea-~~Dl~~i~~LP-G~-K~ 77 (230)
T COG1768 2 RIYAIADLHLALGVP-KPMEVFGEPWSGHHEKIKKHWRSKVSPEDIVLLPGDISWAMRLEEA-EEDLRFIGDLP-GT-KY 77 (230)
T ss_pred ceeeeehhhHhhCCC-CceeecCCcccCchHHHHHHHHhcCChhhEEEecccchhheechhh-hhhhhhhhcCC-Cc-EE
Confidence 566777777654321 23333333333222333333 2345899999999987654321 11123333221 22 36
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEE---EEEeCCEEEEEE---cCC-CCCCCCHHHH--
Q 007218 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWY---STDYGMFRFCIA---DTE-QDWREGTEQY-- 434 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yY---sfd~G~v~Fi~L---DT~-~~~~~g~~Q~-- 434 (612)
.+.||||+.|+.... . +-.+|.. .+| .|.++++.++.. ++. .++.+-++|-
T Consensus 78 m~rGNHDYWw~s~sk-l---------------~n~lp~~----l~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Dek 137 (230)
T COG1768 78 MIRGNHDYWWSSISK-L---------------NNALPPI----LFYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEK 137 (230)
T ss_pred EEecCCccccchHHH-H---------------HhhcCch----HhhhccceeEeeEEEEEeecccCCCCCcCccchhHHH
Confidence 799999998752210 0 0001110 011 245555444433 222 2232333432
Q ss_pred ------HHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeee
Q 007218 435 ------RFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 435 ------~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
.-|+..+.++-++...-.||+.|.|+ +++.. . ...+.+++++++|+.++.||.|.-.|-.
T Consensus 138 i~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP-~s~~~------t------~~~~sevlee~rv~~~lyGHlHgv~~p~ 203 (230)
T COG1768 138 IFLREIGRLRLSADAALPKGVSKFIVMTHYPP-FSDDG------T------PGPFSEVLEEGRVSKCLYGHLHGVPRPN 203 (230)
T ss_pred HHHHHHHHHHHHHHHhcccCcCeEEEEEecCC-CCCCC------C------CcchHHHHhhcceeeEEeeeccCCCCCC
Confidence 22333222222344556899999998 66531 1 1256667889999999999999977654
No 44
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=98.65 E-value=2.6e-06 Score=83.57 Aligned_cols=177 Identities=20% Similarity=0.309 Sum_probs=99.9
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCC-CcccHHHHHHHhhhccc-cCCCeE
Q 007218 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIA-STVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~-~~vP~~ 363 (612)
.+|+++++|.|.... ++..+..++++ .++|+++.+||++|.. +...+-.+-. .++.+. ..+|++
T Consensus 3 ~mkil~vtDlHg~~~------------~~~k~~~~~~~-~~~D~lviaGDlt~~~~~~~~~~~~~~-~~e~l~~~~~~v~ 68 (226)
T COG2129 3 KMKILAVTDLHGSED------------SLKKLLNAAAD-IRADLLVIAGDLTYFHFGPKEVAEELN-KLEALKELGIPVL 68 (226)
T ss_pred cceEEEEeccccchH------------HHHHHHHHHhh-ccCCEEEEecceehhhcCchHHHHhhh-HHHHHHhcCCeEE
Confidence 379999999986531 12233333332 4899999999999432 1111111100 033333 579999
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCC--CC----CCC-HHHHHH
Q 007218 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ--DW----REG-TEQYRF 436 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~--~~----~~g-~~Q~~W 436 (612)
+++||-|-..-. + +....--.+ .+ -+.+.|++.|+.+--.. .| ... .+-+.-
T Consensus 69 avpGNcD~~~v~--~------------~l~~~~~~v-----~~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~ 127 (226)
T COG2129 69 AVPGNCDPPEVI--D------------VLKNAGVNV-----HG--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSK 127 (226)
T ss_pred EEcCCCChHHHH--H------------HHHhccccc-----cc--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHH
Confidence 999998743100 0 000000000 00 35677777777743211 11 112 233444
Q ss_pred HHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007218 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 437 L~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
|+.-+++.+ .+-.|++.|.|+ |..... ...+ ....|...+..++++.++-+.++||.|-+.
T Consensus 128 l~~~v~~~~---~~~~Il~~HaPP-~gt~~d-~~~g--~~hvGS~~vr~~ieefqP~l~i~GHIHEs~ 188 (226)
T COG2129 128 LKSLVKKAD---NPVNILLTHAPP-YGTLLD-TPSG--YVHVGSKAVRKLIEEFQPLLGLHGHIHESR 188 (226)
T ss_pred HHHHHhccc---CcceEEEecCCC-CCcccc-CCCC--ccccchHHHHHHHHHhCCceEEEeeecccc
Confidence 555555532 122399999999 876432 1111 135567899999999999999999999843
No 45
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=98.60 E-value=4e-07 Score=86.10 Aligned_cols=56 Identities=18% Similarity=0.415 Sum_probs=37.9
Q ss_pred HHHHHHHhcCCCCEEEEcCccccCCC--cccHHHHHHHhhhccc---cCCCeEEccCCCccC
Q 007218 316 TTRQLIQDLKNIDIVFHIGDICYANG--YISQWDQFTAQIEPIA---STVPYMIASGNHERD 372 (612)
Q Consensus 316 ~~~~l~~~~~~pdfvl~~GDi~Y~~g--~~~~wd~f~~~i~~l~---~~vP~~~~~GNHD~~ 372 (612)
.++++++. .+||+|+++||++.... ...+|.++...+..+. ..+|++.++||||..
T Consensus 29 ~~~~~i~~-~~pd~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 29 SFQTSLWL-LQPDVVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred HHHHHHHh-cCCCEEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 34455554 58999999999996432 2245655554444432 258999999999974
No 46
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.58 E-value=2.3e-07 Score=84.91 Aligned_cols=50 Identities=18% Similarity=0.241 Sum_probs=33.6
Q ss_pred eEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceee
Q 007218 451 WLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 451 w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
.+|++.|+|+ +.... ..+ . ...+.+.+..++.+++++++|+||.|.....
T Consensus 57 ~~Ilv~H~pp-~~~~~--~~~--~-~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~ 106 (129)
T cd07403 57 VDILLTHAPP-AGIGD--GED--F-AHRGFEAFLDFIDRFRPKLFIHGHTHLNYGY 106 (129)
T ss_pred cCEEEECCCC-CcCcC--ccc--c-cccCHHHHHHHHHHHCCcEEEEcCcCCCcCc
Confidence 3578888887 53321 111 1 1123678888999999999999999986554
No 47
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=98.58 E-value=1.5e-07 Score=94.33 Aligned_cols=163 Identities=19% Similarity=0.225 Sum_probs=93.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHH--HhcCCCCEEEEcCccccCCCcc---------------------c
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLI--QDLKNIDIVFHIGDICYANGYI---------------------S 344 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~--~~~~~pdfvl~~GDi~Y~~g~~---------------------~ 344 (612)
||++.++.+.... .......+. ....+|||+||+||.+|++... .
T Consensus 1 r~a~~SC~~~~~~------------~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (228)
T cd07389 1 RFAFGSCNKYESG------------YFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLE 68 (228)
T ss_pred CEEEEECCCCCCC------------CcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHH
Confidence 5788888765432 112223332 1136899999999999987521 1
Q ss_pred H----HHHHH--HhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCc------cc-cccccccccCCC-----CCCc
Q 007218 345 Q----WDQFT--AQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGE------CG-VLVENMFYVPTE-----NRAK 406 (612)
Q Consensus 345 ~----wd~f~--~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge------~g-~~~~~~f~~P~~-----~~~~ 406 (612)
. |..+. ..++.+.+++|++.++.+||+..+..+. ......... .+ ..|......+.. ....
T Consensus 69 ~~r~~Y~~~~~~p~~~~~~~~~p~~~iwDDHDi~~n~~~~-~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~ 147 (228)
T cd07389 69 EYRERYRQYRSDPDLQRLLAQVPTIGIWDDHDIGDNWGGD-GAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGG 147 (228)
T ss_pred HHHHHHHHHcCCHHHHHHhhcCCEEEeccccccccccccc-cccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCce
Confidence 1 11111 2245667889999999999997543221 000000000 00 011111111111 2356
Q ss_pred eEEEEEeCCE-EEEEEcCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHH
Q 007218 407 FWYSTDYGMF-RFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQK 485 (612)
Q Consensus 407 ~yYsfd~G~v-~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ 485 (612)
.|++|.+|.. .|++||++... ..|.+ +. .. |+.|..
T Consensus 148 ~y~~~~~G~~~~~~~lD~R~~R-------------------------------------d~W~~----~~-~e-r~~l~~ 184 (228)
T cd07389 148 IYRSFRFGDLVDLILLDTRTYR-------------------------------------DSWDG----YP-AE-RERLLD 184 (228)
T ss_pred EEEEEecCCcceEEEEeccccc-------------------------------------ccccc----cH-HH-HHHHHH
Confidence 8999999996 99999998754 12211 10 11 778888
Q ss_pred HHHhCCCe--EEEecccccceee
Q 007218 486 LWQKYKVD--IAVFGHVHNYERI 506 (612)
Q Consensus 486 ll~k~~Vd--lvlsGH~H~YeRt 506 (612)
++.+.++. ++|+|++|..+-.
T Consensus 185 ~~~~~~~~~vv~lSGDvH~~~~~ 207 (228)
T cd07389 185 LLAKRKIKNVVFLSGDVHLAEAS 207 (228)
T ss_pred HHHHhCCCCeEEEecHHHHHHHh
Confidence 76665443 8899999986544
No 48
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=98.57 E-value=1.8e-07 Score=91.37 Aligned_cols=180 Identities=18% Similarity=0.252 Sum_probs=90.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHH-------------------
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD------------------- 347 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd------------------- 347 (612)
=++++++|.+... ..++.+..++.+ .++|+|+++||+.-......+|.
T Consensus 6 ~kilA~s~~~g~~------------e~l~~l~~~~~e-~~~D~~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~ 72 (255)
T PF14582_consen 6 RKILAISNFRGDF------------ELLERLVEVIPE-KGPDAVVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEEC 72 (255)
T ss_dssp -EEEEEE--TT-H------------HHHHHHHHHHHH-HT-SEEEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHH
T ss_pred hhheeecCcchHH------------HHHHHHHhhccc-cCCCEEEEeccccccchhhhHHHHHhhhccCcchhhhhhhhh
Confidence 3789999985421 134455555555 58999999999987666556666
Q ss_pred -------HHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCC--CCCceEEEEEeCCEEE
Q 007218 348 -------QFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE--NRAKFWYSTDYGMFRF 418 (612)
Q Consensus 348 -------~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~--~~~~~yYsfd~G~v~F 418 (612)
.|++.+..+ .+|.+++|||||-.. .-|+. .++....-.|.- -... +.+--|...|
T Consensus 73 ~~~e~~~~ff~~L~~~--~~p~~~vPG~~Dap~---~~~lr---------~a~~~e~v~p~~~~vH~s--f~~~~g~y~v 136 (255)
T PF14582_consen 73 YDSEALDKFFRILGEL--GVPVFVVPGNMDAPE---RFFLR---------EAYNAEIVTPHIHNVHES--FFFWKGEYLV 136 (255)
T ss_dssp HHHHHHHHHHHHHHCC---SEEEEE--TTS-SH---HHHHH---------HHHHCCCC-TTEEE-CTC--EEEETTTEEE
T ss_pred hhHHHHHHHHHHHHhc--CCcEEEecCCCCchH---HHHHH---------HHhccceeccceeeeeee--ecccCCcEEE
Confidence 666666543 799999999999621 00000 011100001100 0011 1223344666
Q ss_pred EEEcCCCC-------CC--CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh
Q 007218 419 CIADTEQD-------WR--EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK 489 (612)
Q Consensus 419 i~LDT~~~-------~~--~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k 489 (612)
+.+-.+.. +. .-....+|..+.|..+ +..-+|++.|.|+-+..+. ...|.+.+..++++
T Consensus 137 ~G~GGeI~~~~~~~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~kg~---------~h~GS~~V~dlIk~ 204 (255)
T PF14582_consen 137 AGMGGEITDDQREEEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHKGL---------IHVGSAAVRDLIKT 204 (255)
T ss_dssp EEE-SEEESSS-BCSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCTCT---------BTTSBHHHHHHHHH
T ss_pred EecCccccCCCccccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCCCc---------ccccHHHHHHHHHh
Confidence 66654321 00 0122345555666664 3456888899997111110 12335688999999
Q ss_pred CCCeEEEecccccceeee
Q 007218 490 YKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 490 ~~VdlvlsGH~H~YeRt~ 507 (612)
|+.+++|+||+|--.-.+
T Consensus 205 ~~P~ivl~Ghihe~~~~e 222 (255)
T PF14582_consen 205 YNPDIVLCGHIHESHGKE 222 (255)
T ss_dssp H--SEEEE-SSS-EE--E
T ss_pred cCCcEEEecccccchhhH
Confidence 999999999999854333
No 49
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.57 E-value=1.4e-06 Score=94.40 Aligned_cols=52 Identities=17% Similarity=0.215 Sum_probs=33.3
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCC
Q 007218 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYAN 340 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~ 340 (612)
.+||++++|+|.+..... . ........+++++++. ..++|+||++||+....
T Consensus 3 ~mKIlh~SD~HlG~~~~~-~--~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~ 56 (405)
T TIGR00583 3 TIRILVSTDNHVGYGEND-P--VRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHEN 56 (405)
T ss_pred ceEEEEEcCCCCCCccCC-c--hhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCC
Confidence 489999999998742110 0 0111234455665543 26899999999999543
No 50
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=98.51 E-value=2.9e-07 Score=88.45 Aligned_cols=57 Identities=19% Similarity=0.478 Sum_probs=38.7
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCc--ccHHHHHHHhhhccc-------cCCCeEEccCCCccC
Q 007218 315 NTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA-------STVPYMIASGNHERD 372 (612)
Q Consensus 315 ~~~~~l~~~~~~pdfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~-------~~vP~~~~~GNHD~~ 372 (612)
+++.+++++ .+||+|+++||++..... ..+|.+..+.++.+. ..+|++.++||||+.
T Consensus 35 ~~~~~~i~~-~~pd~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 35 RAFKTALQR-LKPDVVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred HHHHHHHHh-cCCCEEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 345555553 689999999999954322 135665554444332 268999999999985
No 51
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.47 E-value=2.3e-06 Score=86.16 Aligned_cols=74 Identities=15% Similarity=0.222 Sum_probs=45.3
Q ss_pred EEEecCCCCCCCCCCcccccccChHH-HHHHHHHhcCCCCEEEEcCccccC----CCcccHHHHHHHhhhcccc-CCCeE
Q 007218 290 IIFGDMGKDEADGSNEYNNFQRGSLN-TTRQLIQDLKNIDIVFHIGDICYA----NGYISQWDQFTAQIEPIAS-TVPYM 363 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~-~~~~l~~~~~~pdfvl~~GDi~Y~----~g~~~~wd~f~~~i~~l~~-~vP~~ 363 (612)
++++|+|.+... +...+ .++.+.+...+||+|+++||++.. +......+.+.+.++.+.. .+|++
T Consensus 2 ~~iSDlHl~~~~---------~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~~~~v~ 72 (231)
T TIGR01854 2 LFISDLHLSPER---------PDITALFLDFLREEARKADALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQGVPCY 72 (231)
T ss_pred eEEEecCCCCCC---------hhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHCCCeEE
Confidence 689999987431 11112 233333322479999999999952 1112222344455555543 58999
Q ss_pred EccCCCccC
Q 007218 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
+++||||+.
T Consensus 73 ~v~GNHD~~ 81 (231)
T TIGR01854 73 FMHGNRDFL 81 (231)
T ss_pred EEcCCCchh
Confidence 999999974
No 52
>PRK09453 phosphodiesterase; Provisional
Probab=98.45 E-value=1.4e-05 Score=77.45 Aligned_cols=71 Identities=13% Similarity=0.217 Sum_probs=43.5
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcc-----cHHHHHHHhhhccccCCC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYI-----SQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~-----~~wd~f~~~i~~l~~~vP 361 (612)
+|++++||+|.+. + .++.+.+.+++ .++|.|+++||++...... ...++..+.++.+ ..+
T Consensus 1 mri~viSD~Hg~~-----------~-~~~~~l~~~~~-~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~ 65 (182)
T PRK09453 1 MKLMFASDTHGSL-----------P-ATEKALELFAQ-SGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADK 65 (182)
T ss_pred CeEEEEEeccCCH-----------H-HHHHHHHHHHh-cCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCc
Confidence 4899999999431 1 12333333332 6899999999998532210 0123334444432 358
Q ss_pred eEEccCCCccC
Q 007218 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++.+.||||..
T Consensus 66 v~~V~GNhD~~ 76 (182)
T PRK09453 66 IIAVRGNCDSE 76 (182)
T ss_pred eEEEccCCcch
Confidence 99999999964
No 53
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.44 E-value=1.6e-06 Score=95.33 Aligned_cols=176 Identities=17% Similarity=0.181 Sum_probs=99.5
Q ss_pred HHHHHHHhcCCCCEEEEcCccccCCCc----c---cHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCc
Q 007218 316 TTRQLIQDLKNIDIVFHIGDICYANGY----I---SQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGE 388 (612)
Q Consensus 316 ~~~~l~~~~~~pdfvl~~GDi~Y~~g~----~---~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge 388 (612)
+++.|.+...++|||+++||++--+.- . .......+.+......+|+++++||||.-..+.-. .......
T Consensus 200 ~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~---~~~~~~~ 276 (577)
T KOG3770|consen 200 ALDHIKENHKDIDYIIWTGDNVAHDVWAQTEEENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFA---PGSVPKR 276 (577)
T ss_pred HHHHHHhcCCCCCEEEEeCCCCcccchhhhHHHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcC---CCCCcch
Confidence 444444444559999999999943310 1 11123344556666799999999999986432100 0000000
Q ss_pred ccc--cc------ccccccCCCC----CCceEEE-EEeCCEEEEEEcCCCCCC----------CCHHHHHHHHHHHhhcc
Q 007218 389 CGV--LV------ENMFYVPTEN----RAKFWYS-TDYGMFRFCIADTEQDWR----------EGTEQYRFIEHCLASVD 445 (612)
Q Consensus 389 ~g~--~~------~~~f~~P~~~----~~~~yYs-fd~G~v~Fi~LDT~~~~~----------~g~~Q~~WL~~~L~~~~ 445 (612)
... .| +..| +|.+. ..+-+|. --+++.++|+||+..-.. .-..|++|+..+|.+++
T Consensus 277 ~~~~wly~~~~~~W~~w-lp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae 355 (577)
T KOG3770|consen 277 HSQLWLYKHLAGAWSTW-LPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAE 355 (577)
T ss_pred hhhhHHHHHHHhhhhcc-CCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHH
Confidence 000 00 0111 23221 1334554 445889999999975321 23678999999999864
Q ss_pred CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCC--CeEEEecccccceee
Q 007218 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK--VDIAVFGHVHNYERI 506 (612)
Q Consensus 446 r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~--VdlvlsGH~H~YeRt 506 (612)
++..-+=+++|.|++ .. ...+.- ...+-.++.++. +-..|.||.|.-+-.
T Consensus 356 -~~GekVhil~HIPpG-~~--------~c~~~w-s~~f~~iv~r~~~tI~gqf~GH~h~d~f~ 407 (577)
T KOG3770|consen 356 -SAGEKVHILGHIPPG-DG--------VCLEGW-SINFYRIVNRFRSTIAGQFYGHTHIDEFR 407 (577)
T ss_pred -hcCCEEEEEEeeCCC-Cc--------chhhhh-hHHHHHHHHHHHHhhhhhccccCcceeEE
Confidence 455557788999982 11 111111 334445555552 446799999986543
No 54
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.35 E-value=2.4e-05 Score=80.89 Aligned_cols=198 Identities=15% Similarity=0.114 Sum_probs=91.0
Q ss_pred eEEEEEecCCCCCCCC-CCcccccccChHHHHHHHHHhc--CCCCEEEE-cCccccCCCcccHHH---------HHHHhh
Q 007218 287 QQVIIFGDMGKDEADG-SNEYNNFQRGSLNTTRQLIQDL--KNIDIVFH-IGDICYANGYISQWD---------QFTAQI 353 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~-~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~-~GDi~Y~~g~~~~wd---------~f~~~i 353 (612)
++|+.++|+|..-... ...-.....+....+..++++. .+++.++. +||+..... ...+. ...+.+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~-~~~~~~~~~~~~~~~~~~~l 79 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSP-LADYYAKIEDGDPHPMIAAM 79 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccH-HHHHhhhcccCCCChHHHHH
Confidence 4789999998542110 0000000112234455555442 45777766 999985332 12221 122333
Q ss_pred hccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccc-cccccCC--CCCCceEEEEEeC-CEEE--EEEcCCCC-
Q 007218 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPT--ENRAKFWYSTDYG-MFRF--CIADTEQD- 426 (612)
Q Consensus 354 ~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~yYsfd~G-~v~F--i~LDT~~~- 426 (612)
..+ ... +.++||||+++... .+... ..+.+.++- ....... ....+.|.-++.+ ++++ |.+-+...
T Consensus 80 n~~--g~d-~~~lGNHe~d~g~~--~l~~~--~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 80 NAL--GYD-AGTLGNHEFNYGLD--YLDKV--IKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred Hhc--CCC-EEeecccCcccCHH--HHHHH--HHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 322 233 56789999875211 00000 000001100 0000000 0112346667888 7554 44433211
Q ss_pred -C-----------CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCe
Q 007218 427 -W-----------REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVD 493 (612)
Q Consensus 427 -~-----------~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vd 493 (612)
+ ....+..++..+.|++ .+...+|++.|... ..... ..... +.....|.++ .+||
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~-~~~~~----~~~~~----~~~~~~la~~~~~vD 220 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGF-ERDLE----ESLTG----ENAAYELAEEVPGID 220 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCc-CCCcc----cccCC----ccHHHHHHhcCCCCc
Confidence 1 0112234444445543 46778999999876 21100 00000 2233344444 5899
Q ss_pred EEEecccccce
Q 007218 494 IAVFGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|+||.|...
T Consensus 221 ~IlgGHsH~~~ 231 (277)
T cd07410 221 AILTGHQHRRF 231 (277)
T ss_pred EEEeCCCcccc
Confidence 99999999754
No 55
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.34 E-value=1.8e-06 Score=83.86 Aligned_cols=49 Identities=16% Similarity=0.301 Sum_probs=31.8
Q ss_pred cCCCCEEEEcCccccCCCc--ccHHHHHHHhhhccc--------------------cCCCeEEccCCCccCC
Q 007218 324 LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIA--------------------STVPYMIASGNHERDW 373 (612)
Q Consensus 324 ~~~pdfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~--------------------~~vP~~~~~GNHD~~~ 373 (612)
.-+||.|+++||+.. .+. .++|.+..+.+..+. ..+|++.++||||..+
T Consensus 42 ~l~Pd~V~fLGDLfd-~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG~ 112 (193)
T cd08164 42 WLKPDAVVVLGDLFS-SQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVGY 112 (193)
T ss_pred hcCCCEEEEeccccC-CCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCCC
Confidence 368999999999993 343 334443222221111 2489999999999964
No 56
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.30 E-value=5.5e-06 Score=84.29 Aligned_cols=185 Identities=14% Similarity=0.054 Sum_probs=87.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCC-EEEEcCccccCCCcccHHH---HHHHhhhccccCC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQWD---QFTAQIEPIASTV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pd-fvl~~GDi~Y~~g~~~~wd---~f~~~i~~l~~~v 360 (612)
++|+.++|+|....+ . -+.+....+..++++. .++| +++..||++..... ..+. ...+.+..+ -
T Consensus 1 l~i~~~sD~hg~~~~-~-----~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~-~~~~~~~~~~~~l~~~---g 70 (252)
T cd00845 1 LTILHTNDLHGHFEP-A-----GGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPP-STATKGEANIELMNAL---G 70 (252)
T ss_pred CEEEEecccccCccc-c-----CCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccc-hhccCCcHHHHHHHhc---C
Confidence 479999999943210 0 0112234445555442 3577 77999999854332 1111 222223221 2
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCcccccc-cccc-cc---CCCCCCceEEEEEeCCEE--EEEEcCCCCCC---C-
Q 007218 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLV-ENMF-YV---PTENRAKFWYSTDYGMFR--FCIADTEQDWR---E- 429 (612)
Q Consensus 361 P~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~-~~~f-~~---P~~~~~~~yYsfd~G~v~--Fi~LDT~~~~~---~- 429 (612)
.-++++||||+++... .+-.... +.+.++ .... .. ........|.-++.++++ |+.+.+..... +
T Consensus 71 ~d~~~~GNHe~d~g~~-~l~~~~~---~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~ 146 (252)
T cd00845 71 YDAVTIGNHEFDYGLD-ALAELYK---DANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLG 146 (252)
T ss_pred CCEEeeccccccccHH-HHHHHHH---hCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCC
Confidence 3456789999874211 0000000 000010 0000 00 000112335567778754 45554332110 0
Q ss_pred ------CHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007218 430 ------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 430 ------g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
-....+-+++..+. .+.+...+|++.|.+. .. . + .+...+ .+||++|+||.|..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~-~~--------------~-~-~la~~~--~giDlvlggH~H~~ 206 (252)
T cd00845 147 WIIGLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGL-DD--------------D-E-ELAEEV--PGIDVILGGHTHHL 206 (252)
T ss_pred cccCceecCHHHHHHHHHHH-HhCCCCEEEEEeccCc-cc--------------h-H-HHHhcC--CCccEEEcCCcCcc
Confidence 01123334332222 1256788999999876 10 0 1 222111 58999999999986
Q ss_pred ee
Q 007218 504 ER 505 (612)
Q Consensus 504 eR 505 (612)
+.
T Consensus 207 ~~ 208 (252)
T cd00845 207 LE 208 (252)
T ss_pred cC
Confidence 54
No 57
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.26 E-value=1e-05 Score=82.82 Aligned_cols=185 Identities=18% Similarity=0.149 Sum_probs=88.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCC-EEEEcCccccCCCcccHH---HHHHHhhhccccCC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pd-fvl~~GDi~Y~~g~~~~w---d~f~~~i~~l~~~v 360 (612)
++++.+.|+|.-.... .. +.+.+..+..++++. ++++ +++.+||++.... ...+ +...+.++.+ ..
T Consensus 1 ~~il~~nd~~~~~~~~---~~--~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~-~~~~~~g~~~~~~l~~l--~~ 72 (257)
T cd07406 1 FTILHFNDVYEIAPLD---GG--PVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSL-LSTATKGKQMVPVLNAL--GV 72 (257)
T ss_pred CeEEEEccceeecccC---CC--CcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCcc-chhhcCCccHHHHHHhc--CC
Confidence 4788999998321110 00 112244455555542 4577 9999999984332 1111 1222223222 12
Q ss_pred CeEEccCCCccCCCCCCCCCCCCCCCCccccccc-cccccCCC-C---CCceEEEEEeCCEE--EEEEcCCCCC------
Q 007218 361 PYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPTE-N---RAKFWYSTDYGMFR--FCIADTEQDW------ 427 (612)
Q Consensus 361 P~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~-~~f~~P~~-~---~~~~yYsfd~G~v~--Fi~LDT~~~~------ 427 (612)
-+.++||||+++... .+... -.+.+.++- ........ . .-+.|.-++.++++ |+.+.+....
T Consensus 73 -d~~~~GNHefd~g~~--~l~~~--~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~ 147 (257)
T cd07406 73 -DLACFGNHEFDFGED--QLQKR--LGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTID 147 (257)
T ss_pred -cEEeecccccccCHH--HHHHH--HhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCC
Confidence 256899999964210 00000 000011110 00000000 0 12457778888855 5555443211
Q ss_pred CCC---HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccc
Q 007218 428 REG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNY 503 (612)
Q Consensus 428 ~~g---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Y 503 (612)
..+ ..-.+.+++.++...+.+...+|++.|-+. . . . + . +.++ .+||++|+||.|..
T Consensus 148 ~~~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~-~-------~------d--~-~---la~~~~~iD~IlgGH~H~~ 207 (257)
T cd07406 148 PEYVRYRDYVETARELVDELREQGADLIIALTHMRL-P-------N------D--K-R---LAREVPEIDLILGGHDHEY 207 (257)
T ss_pred CCcceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc-h-------h------h--H-H---HHHhCCCCceEEeccccee
Confidence 000 122233444333322356788999999775 1 0 0 1 2 2223 47999999999986
Q ss_pred e
Q 007218 504 E 504 (612)
Q Consensus 504 e 504 (612)
+
T Consensus 208 ~ 208 (257)
T cd07406 208 I 208 (257)
T ss_pred E
Confidence 6
No 58
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.26 E-value=5.1e-05 Score=77.39 Aligned_cols=195 Identities=17% Similarity=0.169 Sum_probs=98.4
Q ss_pred EEEEEecCCCCCCCCCCcccccccCh---HHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGS---LNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s---~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
|++++||.=.. ++. ...+.++.++ .++||++..||++- .|.... ....+.+.. ..+-+ +
T Consensus 1 ~ilfigdi~g~------------~G~~~~~~~l~~lk~~-~~~D~vi~NgEn~~-gg~gl~-~~~~~~L~~--~G~D~-i 62 (255)
T cd07382 1 KILFIGDIVGK------------PGRKAVKEHLPKLKKE-YKIDFVIANGENAA-GGKGIT-PKIAKELLS--AGVDV-I 62 (255)
T ss_pred CEEEEEeCCCH------------HHHHHHHHHHHHHHHH-CCCCEEEECCcccc-CCCCCC-HHHHHHHHh--cCCCE-E
Confidence 58899998321 111 1233444332 56999999999984 342111 122222222 13344 4
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcC--CCCCCCCHHHHHHHHHHHh
Q 007218 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADT--EQDWREGTEQYRFIEHCLA 442 (612)
Q Consensus 365 ~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT--~~~~~~g~~Q~~WL~~~L~ 442 (612)
+.||||++......+++..+ .+.. --++|.......|+-++.+++++-+++- ......-..-++-+++.++
T Consensus 63 TlGNH~fD~gel~~~l~~~~------~~l~-~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~ 135 (255)
T cd07382 63 TMGNHTWDKKEILDFIDEEP------RLLR-PANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLE 135 (255)
T ss_pred EecccccCcchHHHHHhcCc------CceE-eeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHH
Confidence 55999998642111221100 0000 0122222234457778888866555442 2211111112344566665
Q ss_pred hccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccc
Q 007218 443 SVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYY 522 (612)
Q Consensus 443 ~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y 522 (612)
+.. .+...+||.+|--. .+ + +..+.. ....+||+++.||.|..--- .+.
T Consensus 136 ~lk-~~~D~IIV~~H~g~--ts-----------E---k~ala~-~ldg~VdvIvGtHTHv~t~d-----~~i-------- 184 (255)
T cd07382 136 ELK-EEADIIFVDFHAEA--TS-----------E---KIALGW-YLDGRVSAVVGTHTHVQTAD-----ERI-------- 184 (255)
T ss_pred HHh-cCCCEEEEEECCCC--CH-----------H---HHHHHH-hCCCCceEEEeCCCCccCCc-----cEE--------
Confidence 543 25778999999532 10 1 223332 22346999999999984221 111
Q ss_pred cCCCCCeEEEE-ECCCCCC
Q 007218 523 KGSLNGTIHIA-AGGAGAS 540 (612)
Q Consensus 523 ~~~~~g~vyiv-~G~gG~~ 540 (612)
-++|+.|+. +|+-|..
T Consensus 185 --l~~gTa~itd~Gm~G~~ 201 (255)
T cd07382 185 --LPGGTAYITDVGMTGPY 201 (255)
T ss_pred --eeCCeEEEecCccccCC
Confidence 136777776 5666654
No 59
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.23 E-value=4.1e-06 Score=83.01 Aligned_cols=74 Identities=15% Similarity=0.125 Sum_probs=44.5
Q ss_pred EEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCC-----CcccHHHHH-HHhhhccccCCC
Q 007218 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYAN-----GYISQWDQF-TAQIEPIASTVP 361 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~-----g~~~~wd~f-~~~i~~l~~~vP 361 (612)
++++|+|.+.... ........+.+.. .+++.++++||++..- ......... ...++......+
T Consensus 1 ~~iSDlHlg~~~~---------~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 71 (217)
T cd07398 1 LFISDLHLGDGGP---------AADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTR 71 (217)
T ss_pred CEeeeecCCCCCC---------CHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCe
Confidence 4789999876421 1122233333321 4899999999999531 111112222 333444456799
Q ss_pred eEEccCCCccC
Q 007218 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++.+.||||..
T Consensus 72 v~~v~GNHD~~ 82 (217)
T cd07398 72 VYYVPGNHDFL 82 (217)
T ss_pred EEEECCCchHH
Confidence 99999999975
No 60
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.19 E-value=3.4e-05 Score=79.04 Aligned_cols=191 Identities=18% Similarity=0.238 Sum_probs=99.2
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCCCcc-----------cHHHHHHHhhhcc
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGYI-----------SQWDQFTAQIEPI 356 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~g~~-----------~~wd~f~~~i~~l 356 (612)
|++.||.|..- . .....++.+.+. ..++|++|++||+.-..... ..+..|.+.++..
T Consensus 1 i~v~Gd~HG~~----------~-~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~ 69 (262)
T cd00844 1 IAVEGCCHGEL----------D-KIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGE 69 (262)
T ss_pred CEEEecCCccH----------H-HHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCC
Confidence 57899997521 0 011222333222 24699999999996322111 1233344443332
Q ss_pred c-cCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCC---CCC----
Q 007218 357 A-STVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ---DWR---- 428 (612)
Q Consensus 357 ~-~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~---~~~---- 428 (612)
. ..+|.+++.||||-. .++.....||+. ..+.+.+-. ...+++++++|..|.... ++.
T Consensus 70 ~~~p~~t~fi~GNHE~~-----~~l~~l~~gg~v---~~Ni~~Lg~------~~v~~~~GlrIaGLsG~~~~~~~~~~~~ 135 (262)
T cd00844 70 KKAPILTIFIGGNHEAS-----NYLWELPYGGWV---APNIYYLGY------AGVVNFGGLRIAGLSGIYKSHDYRKGHF 135 (262)
T ss_pred ccCCeeEEEECCCCCCH-----HHHHhhcCCCee---cCcEEEecC------CCEEEECCeEEEEecccccccccccccc
Confidence 2 467779999999952 112111112211 001111111 124667899999887532 111
Q ss_pred ----CCHHHHHHHH-------HHHhhccCCCCCeEEEEEccccccCCCCCccCC-------CCc-----cchhhHHHHHH
Q 007218 429 ----EGTEQYRFIE-------HCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVE-------GSF-----AEPMGRESLQK 485 (612)
Q Consensus 429 ----~g~~Q~~WL~-------~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~-------~~~-----~~~~~r~~l~~ 485 (612)
....+...+. +.|... +.+--|++.|.|+ +.-... +.. ..+ ....|...+..
T Consensus 136 ~~~~~t~~~~rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP-~gI~~~-~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ 210 (262)
T cd00844 136 ERPPYSEDTKRSAYHVRNIEVFKLKQL---KQPIDIFLSHDWP-RGIYKH-GDKKQLLRKKPFFRQDIESGTLGSPAAEE 210 (262)
T ss_pred cCCCCCHHHHHHhhhhhHHHHHHHHhc---CCCCcEEEeCCCC-cchhhc-cchHHhhhcCccchhcccccCCCCHHHHH
Confidence 1122332211 112221 2234699999998 554221 110 000 01335678889
Q ss_pred HHHhCCCeEEEeccccc-ceeeecc
Q 007218 486 LWQKYKVDIAVFGHVHN-YERICPI 509 (612)
Q Consensus 486 ll~k~~VdlvlsGH~H~-YeRt~p~ 509 (612)
|+++.+.+..|+||.|. |++..|-
T Consensus 211 ll~~lkPryhf~gH~H~~f~~~~~~ 235 (262)
T cd00844 211 LLKHLKPRYWFSAHLHVKFAALVPH 235 (262)
T ss_pred HHHHhCCCEEEEecCCcccceecCC
Confidence 99999999999999999 7777543
No 61
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=98.12 E-value=0.00012 Score=74.93 Aligned_cols=198 Identities=15% Similarity=0.083 Sum_probs=104.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccC-hHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEc
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRG-SLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~-s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~ 365 (612)
+|++++||.=... ... ....+.++.++ .++||++..||++ ..|.... ....+.+. ...+-++++
T Consensus 1 m~ilfiGDi~G~~----------Gr~~l~~~L~~lk~~-~~~D~vIaNgEn~-~gG~Gi~-~~~~~~L~--~~GvDviT~ 65 (266)
T TIGR00282 1 IKFLFIGDVYGKA----------GRKIVKNNLPQLKSK-YQADLVIANGENT-THGKGLT-LKIYEFLK--QSGVNYITM 65 (266)
T ss_pred CeEEEEEecCCHH----------HHHHHHHHHHHHHHh-CCCCEEEEcCccc-CCCCCCC-HHHHHHHH--hcCCCEEEc
Confidence 4799999983210 000 11233333332 4799999999999 4442111 12222222 224555554
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCC--CCCCC--CHHHHHHHHHHH
Q 007218 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTE--QDWRE--GTEQYRFIEHCL 441 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~--~~~~~--g~~Q~~WL~~~L 441 (612)
|||+++... .+...+.. +. .....++|....+.-|..++.++..+-+++-. ....+ ...=++-+++.+
T Consensus 66 -GNH~~Dkge---~~~~i~~~--~~--~lrpanyp~~~pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i 137 (266)
T TIGR00282 66 -GNHTWFQKL---ILDVVINQ--KD--LVRPLNFDTSFAGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELI 137 (266)
T ss_pred -cchhccCcH---HHHHHhcc--cc--ccccCCCCCCCCCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHH
Confidence 999998542 11111110 00 01112334333344566678888776665532 11111 111122344444
Q ss_pred hhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCcc
Q 007218 442 ASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHY 521 (612)
Q Consensus 442 ~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~ 521 (612)
++.+ .+++.+||..|.-- +. .+.....+.+.+|++|+.-|.|.--- +.++
T Consensus 138 ~~lk-~~~d~IIVd~Haea----------------ts-EK~a~~~~ldg~vsaVvGtHtHV~Ta-----D~~i------- 187 (266)
T TIGR00282 138 NMLK-KDCDLIFVDFHAET----------------TS-EKNAFGMAFDGYVTAVVGTHTHVPTA-----DLRI------- 187 (266)
T ss_pred Hhhh-cCCCEEEEEeCCCC----------------HH-HHHHHHHHhCCCccEEEeCCCCCCCC-----ccee-------
Confidence 4432 24678999999432 11 23456667788999999999998321 1111
Q ss_pred ccCCCCCeEEEE-ECCCCCC
Q 007218 522 YKGSLNGTIHIA-AGGAGAS 540 (612)
Q Consensus 522 y~~~~~g~vyiv-~G~gG~~ 540 (612)
-++||-|++ +|+-|..
T Consensus 188 ---l~~gtayitD~Gm~G~~ 204 (266)
T TIGR00282 188 ---LPKGTAYITDVGMTGPF 204 (266)
T ss_pred ---CCCCCEEEecCCcccCc
Confidence 146888987 7887764
No 62
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=97.98 E-value=0.00027 Score=73.68 Aligned_cols=82 Identities=17% Similarity=0.202 Sum_probs=42.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCC-CEEEEcCccccCCCcccHH---HHHHHhhhccccCC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYISQW---DQFTAQIEPIASTV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~p-dfvl~~GDi~Y~~g~~~~w---d~f~~~i~~l~~~v 360 (612)
++|+.++|+|..-.... ....-+.+.+..+..++++. .++ .+++..||++......+.+ ....+.+. .+
T Consensus 1 i~il~tnD~Hg~~~~~~-~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n----~~ 75 (288)
T cd07412 1 VQILAINDFHGRLEPPG-KVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALN----AM 75 (288)
T ss_pred CeEEEEeccccCccCCC-CccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHH----hh
Confidence 47899999985322100 00000122344555555542 234 4899999998443332211 11222222 23
Q ss_pred Ce-EEccCCCccCC
Q 007218 361 PY-MIASGNHERDW 373 (612)
Q Consensus 361 P~-~~~~GNHD~~~ 373 (612)
.+ +.++||||+++
T Consensus 76 g~Da~t~GNHefd~ 89 (288)
T cd07412 76 GVDASAVGNHEFDE 89 (288)
T ss_pred CCeeeeeccccccc
Confidence 33 57789999985
No 63
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=97.93 E-value=9.7e-05 Score=75.95 Aligned_cols=189 Identities=12% Similarity=0.085 Sum_probs=88.2
Q ss_pred eEEEEEecCCCCCCCCC---------CcccccccChHHHHHHHHHhc--C-CCCEE-EEcCccccCCCcccHHHHHHHhh
Q 007218 287 QQVIIFGDMGKDEADGS---------NEYNNFQRGSLNTTRQLIQDL--K-NIDIV-FHIGDICYANGYISQWDQFTAQI 353 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~---------~~~~~~~~~s~~~~~~l~~~~--~-~pdfv-l~~GDi~Y~~g~~~~wd~f~~~i 353 (612)
++|+..+|+|..-.... ..+.. .+-+..+..++++. . ++|.+ +.+||+...... ..+.+....+
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~--~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~-~~~~~g~~~~ 77 (264)
T cd07411 1 LTLLHINDLHGQLIPHYELEPSNLLARVFGM--AGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGE-ALYTRGQAMV 77 (264)
T ss_pred CEEEEEcccccCccccccccccccccccccc--cCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChH-HhhcCChhHH
Confidence 36788888876432110 00111 12344555555542 3 78877 579999954332 2121111112
Q ss_pred hccccCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccc-ccccccC--CCCCCceEEEEEeCCE--EEEEEcCCCCCC
Q 007218 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLV-ENMFYVP--TENRAKFWYSTDYGMF--RFCIADTEQDWR 428 (612)
Q Consensus 354 ~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~-~~~f~~P--~~~~~~~yYsfd~G~v--~Fi~LDT~~~~~ 428 (612)
.....+++.++.||||++.... .+... -.+.+.++ ....... .....+.|.-++.+++ .||.+.+.....
T Consensus 78 -~~l~~~g~da~~GNHefd~g~~--~l~~~--~~~~~~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~ 152 (264)
T cd07411 78 -DALNALGVDAMVGHWEFTYGPE--RVREL--FGRLNWPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPI 152 (264)
T ss_pred -HHHHhhCCeEEecccccccCHH--HHHHH--HhhCCCCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCccc
Confidence 2223366666559999874211 00000 00000010 0000000 0001123556788885 456665432100
Q ss_pred --C--------CHHHHHHHHHHHhhcc-CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEE
Q 007218 429 --E--------GTEQYRFIEHCLASVD-RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAV 496 (612)
Q Consensus 429 --~--------g~~Q~~WL~~~L~~~~-r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl 496 (612)
+ -....+.+++.+++.. ..+...+|++.|.+. .. . + . +.++ .+||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~l~H~g~-~~-------------~--~-~---la~~~~~iDlil 212 (264)
T cd07411 153 ANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVLLSHNGL-PV-------------D--V-E---LAERVPGIDVIL 212 (264)
T ss_pred ccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEEEecCCc-hh-------------h--H-H---HHhcCCCCcEEE
Confidence 0 0223444544433321 246788999999765 10 0 1 1 2222 5799999
Q ss_pred ecccccc
Q 007218 497 FGHVHNY 503 (612)
Q Consensus 497 sGH~H~Y 503 (612)
.||.|..
T Consensus 213 gGH~H~~ 219 (264)
T cd07411 213 SGHTHER 219 (264)
T ss_pred eCccccc
Confidence 9999974
No 64
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=97.92 E-value=2.1e-05 Score=78.03 Aligned_cols=65 Identities=20% Similarity=0.253 Sum_probs=42.5
Q ss_pred EEEecCCCCCCCCCCcccccccChHHHHHHHHHhc----------CCCCEEEEcCccccCCCcccHHHHHHHhhhcc---
Q 007218 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----------KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--- 356 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~----------~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--- 356 (612)
+++||+|.. ...++++++.. .+.|.++++||++. .|... .+.++.+..+
T Consensus 1 ~vi~DIHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vd-rG~~~--~~vl~~l~~l~~~ 62 (208)
T cd07425 1 VAIGDLHGD---------------LDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFD-RGPDV--IEILWLLYKLEQE 62 (208)
T ss_pred CEEeCccCC---------------HHHHHHHHHHCCCCCccccccCCCcEEEEECCCcC-CCcCH--HHHHHHHHHHHHH
Confidence 478999754 45677777653 25899999999994 44322 1222322222
Q ss_pred --ccCCCeEEccCCCccC
Q 007218 357 --ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 --~~~vP~~~~~GNHD~~ 372 (612)
....+++++.||||..
T Consensus 63 ~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 63 AAKAGGKVHFLLGNHELM 80 (208)
T ss_pred HHhcCCeEEEeeCCCcHH
Confidence 2356899999999975
No 65
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=97.82 E-value=0.00036 Score=72.43 Aligned_cols=78 Identities=17% Similarity=0.080 Sum_probs=45.4
Q ss_pred eEEEEEeCCEE--EEEEcCCCC--C-C--CC---HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccc
Q 007218 407 FWYSTDYGMFR--FCIADTEQD--W-R--EG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAE 476 (612)
Q Consensus 407 ~yYsfd~G~v~--Fi~LDT~~~--~-~--~g---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~ 476 (612)
.|.-++.++++ ||.+-+... . . .+ .+..+.+++.+++....+...+|++.|-.. . .
T Consensus 131 p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~H~G~--------~------~ 196 (281)
T cd07409 131 PSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALSHSGY--------E------V 196 (281)
T ss_pred CeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEeccCc--------h------h
Confidence 45667888855 555544321 0 0 11 223455666666553345788999999654 0 0
Q ss_pred hhhHHHHHHHHHh-CCCeEEEecccccce
Q 007218 477 PMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 477 ~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
. + . +.++ .+||++|.||.|...
T Consensus 197 d--~-~---la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 197 D--K-E---IARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred H--H-H---HHHcCCCCcEEEeCCcCccc
Confidence 0 1 2 2223 489999999999964
No 66
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.81 E-value=3.3e-05 Score=78.93 Aligned_cols=83 Identities=16% Similarity=0.239 Sum_probs=48.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcc-cHHHHHHHhhhcccc-C-CC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEPIAS-T-VP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~-~~wd~f~~~i~~l~~-~-vP 361 (612)
+||++++|+|.+....... .. ......++++++. ..++|+|+++||+....... .....+.+.++.+.. . +|
T Consensus 1 mkilh~SD~Hlg~~~~~~~--~~-~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~ 77 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVS--RL-AEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIP 77 (253)
T ss_pred CEEEEEhhhcCCCccCCCC--hH-HHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCce
Confidence 5899999999875321100 00 0012234444332 26799999999999543321 122233444444432 3 89
Q ss_pred eEEccCCCccC
Q 007218 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
+++++||||..
T Consensus 78 v~~i~GNHD~~ 88 (253)
T TIGR00619 78 IVVISGNHDSA 88 (253)
T ss_pred EEEEccCCCCh
Confidence 99999999974
No 67
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=97.79 E-value=0.00031 Score=73.12 Aligned_cols=51 Identities=18% Similarity=0.188 Sum_probs=29.1
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007218 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
.+...+|++.|-.. .... ..... .+. ...+...+...+||++|.||.|...
T Consensus 172 ~~~D~VI~lsH~G~-~~~~-~~~~~----~~~-~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 172 EKPDIVIAATHMGH-YDNG-EHGSN----APG-DVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCCEEEEEecccc-cCCc-ccccc----Cch-HHHHHHhcCCCCCCEEEeCCCCccc
Confidence 36778999999775 3211 00000 011 1233333323589999999999854
No 68
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=97.76 E-value=4.2e-05 Score=83.16 Aligned_cols=83 Identities=16% Similarity=0.269 Sum_probs=50.6
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHH--HHHHHhhhccc-cCCC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQW--DQFTAQIEPIA-STVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~w--d~f~~~i~~l~-~~vP 361 (612)
+||++++|+|.+... .+...+. ......+.++++. ..++||||++||+... .....- ..+.+.++.+. .++|
T Consensus 1 mkilHtSD~HLG~~~-~~~~~r~-~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~-~~Ps~~a~~~~~~~l~~l~~~~Ip 77 (390)
T COG0420 1 MKILHTSDWHLGSKQ-LNLPSRL-EDQKKAFDELLEIAKEEKVDFVLIAGDLFDT-NNPSPRALKLFLEALRRLKDAGIP 77 (390)
T ss_pred CeeEEecccccchhh-ccCccch-HHHHHHHHHHHHHHHHccCCEEEEccccccC-CCCCHHHHHHHHHHHHHhccCCCc
Confidence 589999999998311 0000011 1122334443332 2689999999999954 433222 24555555543 5799
Q ss_pred eEEccCCCccC
Q 007218 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++++.||||..
T Consensus 78 v~~I~GNHD~~ 88 (390)
T COG0420 78 VVVIAGNHDSP 88 (390)
T ss_pred EEEecCCCCch
Confidence 99999999975
No 69
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=97.76 E-value=0.00029 Score=72.09 Aligned_cols=78 Identities=17% Similarity=0.230 Sum_probs=41.6
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHH---HHHHhhhccccCCC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWD---QFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd---~f~~~i~~l~~~vP 361 (612)
++++.++|+|..-..... +.+.+..+..++++. .+.++++.+||+..... ...+. ...+.+.. ...-
T Consensus 1 i~il~~~D~H~~~~~~~~-----~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~-~~~~~~g~~~~~~ln~--~g~d 72 (257)
T cd07408 1 ITILHTNDIHGRIDEDDN-----NGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLP-ISDLDKGETIIKIMNA--VGYD 72 (257)
T ss_pred CEEEEeccCcccccCCCC-----ccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCch-hhhhcCCcHHHHHHHh--cCCc
Confidence 478999999964321000 112244455555542 25789999999984322 11111 12222222 1334
Q ss_pred eEEccCCCccCC
Q 007218 362 YMIASGNHERDW 373 (612)
Q Consensus 362 ~~~~~GNHD~~~ 373 (612)
+ .++||||+++
T Consensus 73 ~-~~~GNHefd~ 83 (257)
T cd07408 73 A-VTPGNHEFDY 83 (257)
T ss_pred E-EccccccccC
Confidence 4 5689999974
No 70
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=97.70 E-value=0.0013 Score=63.01 Aligned_cols=64 Identities=16% Similarity=0.335 Sum_probs=40.5
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
.+++++||+|...+ ......++. ...++|+|+|+||.+..... +.+-.. -..+++++.
T Consensus 2 m~ilviSDtH~~~~------------~~~~~~~~~-~~~~~d~vih~GD~~~~~~~----~~l~~~-----~~~~i~~V~ 59 (172)
T COG0622 2 MKILVISDTHGPLR------------AIEKALKIF-NLEKVDAVIHAGDSTSPFTL----DALEGG-----LAAKLIAVR 59 (172)
T ss_pred cEEEEEeccCCChh------------hhhHHHHHh-hhcCCCEEEECCCcCCccch----HHhhcc-----cccceEEEE
Confidence 58999999997532 011122222 23789999999999943221 111111 146889999
Q ss_pred CCCccC
Q 007218 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||.|..
T Consensus 60 GN~D~~ 65 (172)
T COG0622 60 GNCDGE 65 (172)
T ss_pred ccCCCc
Confidence 999974
No 71
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=97.69 E-value=0.00022 Score=76.36 Aligned_cols=124 Identities=15% Similarity=0.140 Sum_probs=72.4
Q ss_pred CCceEEEEEecCCCCCCCCCCccc----ccccChHHHHHH---HHHhcCCCCEEEEcCccccCCCc---ccHHHHHHHhh
Q 007218 284 DSLQQVIIFGDMGKDEADGSNEYN----NFQRGSLNTTRQ---LIQDLKNIDIVFHIGDICYANGY---ISQWDQFTAQI 353 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~----~~~~~s~~~~~~---l~~~~~~pdfvl~~GDi~Y~~g~---~~~wd~f~~~i 353 (612)
+..+|+++++|.|.-+.-.+..+. .+... --+.+ +....-+||.++++||+.. .|. .++|.+..+.+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D--~~lrr~f~~~~~~lkPdvvffLGDLfD-eG~~~~~eEf~~~~~Rf 122 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGND--WYLRRSFDMSQWRLKPDVVFFLGDLFD-EGQWAGDEEFKKRYERF 122 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhH--HHHHHHHHHHHhccCCCEEEEeccccc-cCccCChHHHHHHHHHH
Confidence 445999999999986532111110 01000 01111 1112368999999999994 343 46777655555
Q ss_pred hccc---cCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCC
Q 007218 354 EPIA---STVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQ 425 (612)
Q Consensus 354 ~~l~---~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~ 425 (612)
+.+. ..+|.+.++||||.+..+. .-.....||.- ..++...+|+.|++.|+++|++.
T Consensus 123 kkIf~~k~~~~~~~i~GNhDIGf~~~------------~~~~~i~Rfe~---~fg~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 123 KKIFGRKGNIKVIYIAGNHDIGFGNE------------LIPEWIDRFES---VFGPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred HHhhCCCCCCeeEEeCCccccccccc------------cchhHHHHHHH---hhcchhhhhccCCceeEEeeehh
Confidence 5443 4799999999999963210 00011123310 01223457899999999999875
No 72
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=97.69 E-value=0.0005 Score=71.37 Aligned_cols=81 Identities=9% Similarity=0.051 Sum_probs=45.2
Q ss_pred eEEEEEeC-CEE--EEEEcCCCC-------CCCC--HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCc
Q 007218 407 FWYSTDYG-MFR--FCIADTEQD-------WREG--TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSF 474 (612)
Q Consensus 407 ~yYsfd~G-~v~--Fi~LDT~~~-------~~~g--~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~ 474 (612)
.|.-++.+ +++ ||.+-+... +... ..|.+|+.+.|++ .+...+|++.|... .. +.
T Consensus 137 ~y~i~~~~~G~kIgiiGltt~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~--~~------d~-- 203 (282)
T cd07407 137 RYRKFTTKHGLRVLAFGFLFDFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPV--RD------DA-- 203 (282)
T ss_pred ceEEEEcCCCcEEEEEEEecccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCC--CC------Cc--
Confidence 35566766 654 565544321 1111 2333588888874 46778999999774 11 11
Q ss_pred cchhhHHHHHHHHHhC-CCe-EEEecccccc
Q 007218 475 AEPMGRESLQKLWQKY-KVD-IAVFGHVHNY 503 (612)
Q Consensus 475 ~~~~~r~~l~~ll~k~-~Vd-lvlsGH~H~Y 503 (612)
.. .+....+.++. ++| ++|.||.|..
T Consensus 204 --~~-~~~~~~la~~~~~id~~Ii~GHsH~~ 231 (282)
T cd07407 204 --EF-KVLHDAIRKIFPDTPIQFLGGHSHVR 231 (282)
T ss_pred --cH-HHHHHHHHHhCCCCCEEEEeCCcccc
Confidence 11 11222333343 577 7999999974
No 73
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.62 E-value=9.6e-05 Score=78.85 Aligned_cols=83 Identities=17% Similarity=0.281 Sum_probs=48.6
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCC-cccHHHHHHHh--hhccc-cCC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQ--IEPIA-STV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g-~~~~wd~f~~~--i~~l~-~~v 360 (612)
+||++++|+|.+..... .+ ........++++++. ..++|+|+++||+..... ....-..|... ++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~-~~--~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDD-PW--FQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCC-hh--hHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCC
Confidence 58999999998753211 10 011112344554432 268999999999995432 21111123322 33332 369
Q ss_pred CeEEccCCCccC
Q 007218 361 PYMIASGNHERD 372 (612)
Q Consensus 361 P~~~~~GNHD~~ 372 (612)
|+++++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.62 E-value=0.0001 Score=80.41 Aligned_cols=82 Identities=13% Similarity=0.193 Sum_probs=46.6
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHH--HHHHHhhhccc-cCCC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQW--DQFTAQIEPIA-STVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~w--d~f~~~i~~l~-~~vP 361 (612)
+||++++|+|.+..-.. .... ......++++++. ..+||+|+++||+... +....+ ..+.+.+..+. ..+|
T Consensus 1 mkilh~SDlHlG~~~~~--~~~~-~~~~~~l~~l~~~i~~~~~D~viIaGDifD~-~~p~~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYS--KSRA-AEHQAFLDWLLEQVQEHQVDAIIVAGDIFDT-GSPPSYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccC--cccH-HHHHHHHHHHHHHHHhcCCCEEEECCccccC-CCCcHHHHHHHHHHHHHHHhcCCc
Confidence 58999999998742100 0000 0011123333332 2689999999999943 332222 22233333332 2589
Q ss_pred eEEccCCCccC
Q 007218 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
+++++||||..
T Consensus 77 v~~I~GNHD~~ 87 (407)
T PRK10966 77 LVVLAGNHDSV 87 (407)
T ss_pred EEEEcCCCCCh
Confidence 99999999974
No 75
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.58 E-value=0.00075 Score=83.16 Aligned_cols=194 Identities=16% Similarity=0.146 Sum_probs=89.8
Q ss_pred CCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEE-cCccccCCCccc--HHHHHHHhhhccc
Q 007218 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFH-IGDICYANGYIS--QWDQFTAQIEPIA 357 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~-~GDi~Y~~g~~~--~wd~f~~~i~~l~ 357 (612)
....++|++++|+|..- . ....+..++++ ..+++.|+. +||++....... .+....+.+..
T Consensus 657 ~~~~l~Il~~nD~Hg~l-~-----------g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~-- 722 (1163)
T PRK09419 657 DNWELTILHTNDFHGHL-D-----------GAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKE-- 722 (1163)
T ss_pred CceEEEEEEEeecccCC-C-----------CHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhC--
Confidence 33459999999999431 1 12223333332 146777755 999984332111 11122233322
Q ss_pred cCCCe-EEccCCCccCCCCCC--CCCCCCC--CC----Ccccccc--ccccccCCCC---CCceEEEEEeCCE--EEEEE
Q 007218 358 STVPY-MIASGNHERDWPGTG--SFYGNMD--SG----GECGVLV--ENMFYVPTEN---RAKFWYSTDYGMF--RFCIA 421 (612)
Q Consensus 358 ~~vP~-~~~~GNHD~~~~~~~--~~y~~~d--sg----ge~g~~~--~~~f~~P~~~---~~~~yYsfd~G~v--~Fi~L 421 (612)
+.+ +.++||||+++.... .+..... .. ...+.|+ .+.+...... ....|.-++.+++ -||.+
T Consensus 723 --lg~d~~~~GNHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGl 800 (1163)
T PRK09419 723 --MGYDASTFGNHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGL 800 (1163)
T ss_pred --cCCCEEEecccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEe
Confidence 233 569999999753210 0000000 00 0000010 0001000000 1134666788885 45666
Q ss_pred cCCCC---CCC----C---HHHHHHHHHHHhhcc-CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-
Q 007218 422 DTEQD---WRE----G---TEQYRFIEHCLASVD-RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK- 489 (612)
Q Consensus 422 DT~~~---~~~----g---~~Q~~WL~~~L~~~~-r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k- 489 (612)
-+... ..+ + ....+.+++..++.. ..+...+|++.|... ... . ..+ ......|.++
T Consensus 801 tt~~~~~~~~p~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~-~~d-~---~~~-------~~~~~~lA~~v 868 (1163)
T PRK09419 801 TTPETAYKTSPGNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGS-NQD-R---TTG-------EITGLELAKKV 868 (1163)
T ss_pred cccccccccCCCCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCc-ccc-c---ccc-------ccHHHHHHHhC
Confidence 54321 001 0 122333444433332 146788999999875 211 0 001 1123344444
Q ss_pred CCCeEEEecccccce
Q 007218 490 YKVDIAVFGHVHNYE 504 (612)
Q Consensus 490 ~~VdlvlsGH~H~Ye 504 (612)
-+||++|.||.|..-
T Consensus 869 ~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 869 KGVDAIISAHTHTLV 883 (1163)
T ss_pred CCCCEEEeCCCCccc
Confidence 379999999999853
No 76
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.57 E-value=0.00025 Score=66.52 Aligned_cols=54 Identities=11% Similarity=0.225 Sum_probs=34.2
Q ss_pred HHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCCCc
Q 007218 315 NTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHE 370 (612)
Q Consensus 315 ~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GNHD 370 (612)
+.++++.+...+.|++|.+||+.-.+.....|..|.+- .....+|.|++-||||
T Consensus 15 ~kv~~~~~k~gpFd~~ic~Gdff~~~~~~~~~~~y~~g--~~~~pipTyf~ggn~~ 68 (150)
T cd07380 15 EKVNTINKKKGPFDALLCVGDFFGDDEDDEELEAYKDG--SKKVPIPTYFLGGNNP 68 (150)
T ss_pred HHHHHHhcccCCeeEEEEecCccCCccchhhHHHHhcC--CccCCCCEEEECCCCC
Confidence 44455444456799999999999544433334444332 2234688888888886
No 77
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.52 E-value=0.0011 Score=75.49 Aligned_cols=199 Identities=17% Similarity=0.145 Sum_probs=87.6
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc------CC-CCEEEEcCccccCCCcccHHHHHHHhhhccc
Q 007218 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL------KN-IDIVFHIGDICYANGYISQWDQFTAQIEPIA 357 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~------~~-pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~ 357 (612)
..++|+.++|+|..-... .+. ..-+..+..++++. .+ .-+++..||+.... ..+.+..-...++ +.
T Consensus 33 ~~ltil~tnD~Hg~~~~~--~~~---~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs-~~s~~~~g~~~i~-~m 105 (551)
T PRK09558 33 YKITILHTNDHHGHFWRN--EYG---EYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGV-PESDLQDAEPDFR-GM 105 (551)
T ss_pred eEEEEEEecccCCCcccc--ccC---CccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccce-EhhhhcCCchhHH-HH
Confidence 458999999999753210 011 11133334444321 13 34788899998422 1111110001111 11
Q ss_pred cCCCe-EEccCCCccCCCCCCCCCCCCCCCCccccccc-cccccCC--CCCCceEEEEEeCCEE--EEEEcCCCC--C-C
Q 007218 358 STVPY-MIASGNHERDWPGTGSFYGNMDSGGECGVLVE-NMFYVPT--ENRAKFWYSTDYGMFR--FCIADTEQD--W-R 428 (612)
Q Consensus 358 ~~vP~-~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~-~~f~~P~--~~~~~~yYsfd~G~v~--Fi~LDT~~~--~-~ 428 (612)
..+.+ ..++||||+++... .+.... .+...|+- ....... ...-..|.-++.++++ ||.+-+... + .
T Consensus 106 N~~g~Da~tlGNHEFD~G~~--~L~~~~--~~a~fp~l~aNv~~~~~g~~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~ 181 (551)
T PRK09558 106 NLIGYDAMAVGNHEFDNPLS--VLRKQE--KWAKFPFLSANIYQKSTGERLFKPYAIFDRQGLKIAVIGLTTEDTAKIGN 181 (551)
T ss_pred hcCCCCEEcccccccCcCHH--HHHHhh--ccCCCCEEEEEEEECCCCCcccCCeEEEEECCEEEEEEEEeccccccccC
Confidence 22222 45679999986321 110000 00001110 0000000 0112346667888855 555543321 1 0
Q ss_pred CC-------HHHHHHHHHHHhhccC-CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhC---CCeEEEe
Q 007218 429 EG-------TEQYRFIEHCLASVDR-QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY---KVDIAVF 497 (612)
Q Consensus 429 ~g-------~~Q~~WL~~~L~~~~r-~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~---~Vdlvls 497 (612)
+. ....+-+++.+++... .+...+|++.|..+ ..... .+ +.. ..-..|.++. +||++|.
T Consensus 182 ~~~~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~-~~~~~----~~---~~~--~~d~~la~~~~~~~IDvIlg 251 (551)
T PRK09558 182 PEYFTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGH-YDDGE----HG---SNA--PGDVEMARSLPAGGLDMIVG 251 (551)
T ss_pred CCCcCCceECCHHHHHHHHHHHHHhccCCCEEEEEecccc-ccCCc----cC---CCC--ccHHHHHHhCCccCceEEEe
Confidence 10 1112223333333321 46788999999876 22110 00 000 0112344443 7999999
Q ss_pred cccccce
Q 007218 498 GHVHNYE 504 (612)
Q Consensus 498 GH~H~Ye 504 (612)
||.|.+-
T Consensus 252 GHsH~~~ 258 (551)
T PRK09558 252 GHSQDPV 258 (551)
T ss_pred CCCCccc
Confidence 9999853
No 78
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.47 E-value=0.00055 Score=68.06 Aligned_cols=72 Identities=17% Similarity=0.191 Sum_probs=46.4
Q ss_pred EEecCCCCCCCCCCcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCC-CcccHHHHHHHh----hhccc-cCCCeE
Q 007218 291 IFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYAN-GYISQWDQFTAQ----IEPIA-STVPYM 363 (612)
Q Consensus 291 v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~-g~~~~wd~f~~~----i~~l~-~~vP~~ 363 (612)
+++|.|.+... |.....+...+++ ..+.|.++++||++..= |. ..|.++.++ +..++ +.+|++
T Consensus 2 FISDlHL~~~~---------p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g~-~~~~~~~~~V~~~l~~~a~~G~~v~ 71 (237)
T COG2908 2 FISDLHLGPKR---------PALTAFFLDFLREEAAQADALYILGDIFDGWIGD-DEPPQLHRQVAQKLLRLARKGTRVY 71 (237)
T ss_pred eeeccccCCCC---------cHHHHHHHHHHHhccccCcEEEEechhhhhhhcC-CcccHHHHHHHHHHHHHHhcCCeEE
Confidence 68999987431 3334455666665 23569999999999531 22 245555433 33333 459999
Q ss_pred EccCCCccC
Q 007218 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||.-
T Consensus 72 ~i~GN~Dfl 80 (237)
T COG2908 72 YIHGNHDFL 80 (237)
T ss_pred EecCchHHH
Confidence 999999964
No 79
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=97.42 E-value=0.0011 Score=74.86 Aligned_cols=204 Identities=14% Similarity=0.139 Sum_probs=95.6
Q ss_pred CCCCceEEEEEecCCCCCCCCCCccccccc--ChHHHHHHHHHh---cCCCCEEEEcCccccCCCcccHHHHHHHhhhcc
Q 007218 282 GQDSLQQVIIFGDMGKDEADGSNEYNNFQR--GSLNTTRQLIQD---LKNIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 282 g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~--~s~~~~~~l~~~---~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
.....++|+...|+|..-... .+..... +.+..+..++++ ..+..++|.+||+......... ..-.+.+-.+
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~--~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~-~~~g~~~~~~ 98 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPY--DYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY-LTKGEPTVDL 98 (517)
T ss_pred cCceeEEEEEeccccccceec--cccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc-ccCCChHHHH
Confidence 334569999999999754310 1110011 122223333332 2345689999999954332211 0000111112
Q ss_pred ccCCCe-EEccCCCccCCCCCCCCCCCCCCCCcccccc--ccccccCC--CCCCceEEEEEeCCE--EEEEEcCCC--CC
Q 007218 357 ASTVPY-MIASGNHERDWPGTGSFYGNMDSGGECGVLV--ENMFYVPT--ENRAKFWYSTDYGMF--RFCIADTEQ--DW 427 (612)
Q Consensus 357 ~~~vP~-~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~--~~~f~~P~--~~~~~~yYsfd~G~v--~Fi~LDT~~--~~ 427 (612)
+..++| ..++||||++.... ++... ..+...|+ .+.+.-+. ....+.|.-++.+++ -+|.+.+.. .+
T Consensus 99 mN~m~yDa~tiGNHEFd~g~~--~l~~~--~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~~~~ 174 (517)
T COG0737 99 LNALGYDAMTLGNHEFDYGLE--ALARL--LDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTIPTW 174 (517)
T ss_pred HhhcCCcEEeecccccccCHH--HHHHH--HhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCccccc
Confidence 223444 57999999985321 00000 00000110 00000000 112356778888885 456665421 11
Q ss_pred CC--------CHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecc
Q 007218 428 RE--------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGH 499 (612)
Q Consensus 428 ~~--------g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH 499 (612)
.. -....+++++.+.+.......-+|++.|-++ ...... ..... .. ..... .++|+++.||
T Consensus 175 ~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~-~~d~~~-~~~~~--~~--~~~~~-----~~iD~i~~GH 243 (517)
T COG0737 175 EKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGI-EDDLEL-ASEVP--GD--VDVAV-----PGIDLIIGGH 243 (517)
T ss_pred ccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCc-Cccccc-ccccc--cc--ccccc-----cCcceEeccC
Confidence 11 1234566666666654333678999999886 322111 10000 00 11111 4499999999
Q ss_pred cccc
Q 007218 500 VHNY 503 (612)
Q Consensus 500 ~H~Y 503 (612)
.|.+
T Consensus 244 ~H~~ 247 (517)
T COG0737 244 SHTV 247 (517)
T ss_pred Cccc
Confidence 9974
No 80
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.12 E-value=0.0085 Score=68.14 Aligned_cols=79 Identities=18% Similarity=0.134 Sum_probs=42.3
Q ss_pred ceEEEEEeCC--EEEEEEcCCCC-C---CCC-----HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCc
Q 007218 406 KFWYSTDYGM--FRFCIADTEQD-W---REG-----TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSF 474 (612)
Q Consensus 406 ~~yYsfd~G~--v~Fi~LDT~~~-~---~~g-----~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~ 474 (612)
..|.-++.++ |-||.|.+... . .++ ....+=+++..+.....+...+|++.|... .
T Consensus 129 ~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~~g~D~II~lsH~g~--~----------- 195 (550)
T TIGR01530 129 KPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQQGINKIILLSHAGF--E----------- 195 (550)
T ss_pred CceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHhCCCCEEEEEecCCc--H-----------
Confidence 3466678887 56777755221 1 111 011121222222222245778999999653 1
Q ss_pred cchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007218 475 AEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 475 ~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
+. . .+.++ .+||++|.||.|.+-
T Consensus 196 -~d--~----~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 196 -KN--C----EIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred -HH--H----HHHhcCCCCCEEEeCCCCccc
Confidence 00 1 12333 379999999999954
No 81
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.07 E-value=0.0012 Score=68.12 Aligned_cols=65 Identities=17% Similarity=0.301 Sum_probs=44.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+++++||+|.. ...+++++++. .+.|.++++||++ +.|..+ .+..+.+..+ ..++.+
T Consensus 2 ~~~vIGDIHG~---------------~~~l~~ll~~~~~~~~~D~li~lGDlV-drGp~s--~~vl~~l~~l--~~~~~~ 61 (275)
T PRK00166 2 ATYAIGDIQGC---------------YDELQRLLEKIDFDPAKDTLWLVGDLV-NRGPDS--LEVLRFVKSL--GDSAVT 61 (275)
T ss_pred cEEEEEccCCC---------------HHHHHHHHHhcCCCCCCCEEEEeCCcc-CCCcCH--HHHHHHHHhc--CCCeEE
Confidence 68999999853 34567777654 3689999999999 445432 2334444333 346789
Q ss_pred ccCCCccC
Q 007218 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
+.||||..
T Consensus 62 VlGNHD~~ 69 (275)
T PRK00166 62 VLGNHDLH 69 (275)
T ss_pred EecChhHH
Confidence 99999973
No 82
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.03 E-value=0.0069 Score=63.91 Aligned_cols=39 Identities=23% Similarity=0.162 Sum_probs=25.5
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007218 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
.+..-+|++.|-.- +. +. + .|.++ -+||++|.||.|.+-
T Consensus 206 ~gvD~II~LsH~g~-~~------------~d--~----~lA~~v~gIDvIigGHsH~~l 245 (313)
T cd08162 206 QGINKIILLSHLQQ-IS------------IE--Q----ALAALLSGVDVIIAGGSNTLL 245 (313)
T ss_pred CCCCEEEEEecccc-cc------------hH--H----HHHhcCCCCCEEEeCCCCccC
Confidence 45778999999631 11 01 1 23444 379999999999863
No 83
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.00 E-value=0.0013 Score=66.27 Aligned_cols=67 Identities=19% Similarity=0.303 Sum_probs=44.2
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc----C--------CCCEEEEcCccccCCCcccHHHHHHHhhhc
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----K--------NIDIVFHIGDICYANGYISQWDQFTAQIEP 355 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~----~--------~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~ 355 (612)
|++++||+|.. ...+++++++. . +.|.++++||++ +.|..+ .+-.+.+..
T Consensus 2 ~i~vigDIHG~---------------~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlI-DrG~~s--~evl~~l~~ 63 (234)
T cd07423 2 PFDIIGDVHGC---------------YDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLV-DRGPDS--PEVLRLVMS 63 (234)
T ss_pred CeEEEEECCCC---------------HHHHHHHHHHcCCccccCccccCCCCCEEEEECCcc-CCCCCH--HHHHHHHHH
Confidence 68999999854 34566666653 1 368999999999 445432 233444433
Q ss_pred cccCCCeEEccCCCccC
Q 007218 356 IASTVPYMIASGNHERD 372 (612)
Q Consensus 356 l~~~vP~~~~~GNHD~~ 372 (612)
+...-.+..+.||||..
T Consensus 64 l~~~~~~~~v~GNHE~~ 80 (234)
T cd07423 64 MVAAGAALCVPGNHDNK 80 (234)
T ss_pred HhhCCcEEEEECCcHHH
Confidence 33334578999999963
No 84
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=96.99 E-value=0.0012 Score=63.39 Aligned_cols=54 Identities=22% Similarity=0.387 Sum_probs=34.5
Q ss_pred HHHHHHhcCCCCEEEEcCccccCCCcccHHHHH--HHhhhccccCCCeEEccCCCccC
Q 007218 317 TRQLIQDLKNIDIVFHIGDICYANGYISQWDQF--TAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 317 ~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f--~~~i~~l~~~vP~~~~~GNHD~~ 372 (612)
+.+++++ .+||.|+++||+++..... .+..+ ..........+|++.+.||||..
T Consensus 33 l~~~~~~-~~~d~lii~GDl~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 33 LDRLIEE-YGPERLIILGDLKHSFGGL-SRQEFEEVAFLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred HHHHHHh-cCCCEEEEeCccccccccc-CHHHHHHHHHHHhccCCCeEEEEcccCccc
Confidence 3344433 6899999999999653321 12221 11233345678999999999974
No 85
>PHA02239 putative protein phosphatase
Probab=96.98 E-value=0.0013 Score=66.48 Aligned_cols=68 Identities=13% Similarity=0.309 Sum_probs=41.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---C-CCCEEEEcCccccCCCcccHHHHHHHhh-hccccCCC
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---K-NIDIVFHIGDICYANGYISQWDQFTAQI-EPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~-~pdfvl~~GDi~Y~~g~~~~wd~f~~~i-~~l~~~vP 361 (612)
+|++++||+|.. ...++++++.. . ..|.++++||++ +.|..+. +..+.+ +.+....+
T Consensus 1 m~~~~IsDIHG~---------------~~~l~~ll~~i~~~~~~~d~li~lGD~i-DrG~~s~--~v~~~l~~~~~~~~~ 62 (235)
T PHA02239 1 MAIYVVPDIHGE---------------YQKLLTIMDKINNERKPEETIVFLGDYV-DRGKRSK--DVVNYIFDLMSNDDN 62 (235)
T ss_pred CeEEEEECCCCC---------------HHHHHHHHHHHhhcCCCCCEEEEecCcC-CCCCChH--HHHHHHHHHhhcCCC
Confidence 378999999943 12344444432 1 359999999999 4554332 222222 21223457
Q ss_pred eEEccCCCccC
Q 007218 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
+++++||||..
T Consensus 63 ~~~l~GNHE~~ 73 (235)
T PHA02239 63 VVTLLGNHDDE 73 (235)
T ss_pred eEEEECCcHHH
Confidence 89999999963
No 86
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=96.92 E-value=0.0014 Score=65.74 Aligned_cols=84 Identities=13% Similarity=0.081 Sum_probs=50.2
Q ss_pred eEEEEEecCCCCCCCCCCccccccc--ChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCe
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQR--GSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~--~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (612)
-+.++++|.|.+....-.......| ...++++++.+. ..+||.|+++||+.+.......|..+.+.++.+ ..++
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~~~~~~~~~~~l~~~--~~~v 92 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKKGLEWRFIREFIEVT--FRDL 92 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCChHHHHHHHHHHHhc--CCcE
Confidence 3588999999874210000000011 112344554442 257999999999997554324555555555543 3599
Q ss_pred EEccCCCccC
Q 007218 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~~~GNHD~~ 372 (612)
+.+.||||..
T Consensus 93 ~~V~GNHD~~ 102 (225)
T TIGR00024 93 ILIRGNHDAL 102 (225)
T ss_pred EEECCCCCCc
Confidence 9999999963
No 87
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.85 E-value=0.0018 Score=65.66 Aligned_cols=76 Identities=13% Similarity=0.306 Sum_probs=47.0
Q ss_pred EEEecCCCCCCCCCCcccccccChHHHHHHHHHhc----CCCCEEEEcCccccCCC----c---------ccHHHHHHHh
Q 007218 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL----KNIDIVFHIGDICYANG----Y---------ISQWDQFTAQ 352 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~----~~pdfvl~~GDi~Y~~g----~---------~~~wd~f~~~ 352 (612)
++++|+|.+... . .......+.+.++.. .++|.|+++||++.... . ...+..+.+.
T Consensus 2 ~~iSDlHl~~~~----~---~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (243)
T cd07386 2 VFISDVHVGSKT----F---LEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEY 74 (243)
T ss_pred EEecccCCCchh----h---hHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHH
Confidence 689999976421 0 011122333333321 25799999999995421 0 1123445566
Q ss_pred hhccccCCCeEEccCCCccC
Q 007218 353 IEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 353 i~~l~~~vP~~~~~GNHD~~ 372 (612)
++.+.+.+|+++++||||..
T Consensus 75 l~~L~~~~~v~~ipGNHD~~ 94 (243)
T cd07386 75 LSDVPSHIKIIIIPGNHDAV 94 (243)
T ss_pred HHhcccCCeEEEeCCCCCcc
Confidence 67777789999999999974
No 88
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=96.85 E-value=0.0023 Score=65.09 Aligned_cols=66 Identities=18% Similarity=0.220 Sum_probs=43.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC-----------CCCEEEEcCccccCCCcccHHHHHHHhhhcc
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-----------NIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~-----------~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
|++++||+|.. ...++++++... .-|.++++||++ ++|..+ .+.++.+..+
T Consensus 2 ~~~vIGDIHG~---------------~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDli-DRGp~S--~~vl~~~~~~ 63 (245)
T PRK13625 2 KYDIIGDIHGC---------------YQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLT-DRGPHS--LRMIEIVWEL 63 (245)
T ss_pred ceEEEEECccC---------------HHHHHHHHHHcCCCcccCcccCCCCCEEEEECccc-CCCcCh--HHHHHHHHHH
Confidence 68999999843 455677776521 247899999999 556433 2233333333
Q ss_pred ccCCCeEEccCCCcc
Q 007218 357 ASTVPYMIASGNHER 371 (612)
Q Consensus 357 ~~~vP~~~~~GNHD~ 371 (612)
...-.++++.||||.
T Consensus 64 ~~~~~~~~l~GNHE~ 78 (245)
T PRK13625 64 VEKKAAYYVPGNHCN 78 (245)
T ss_pred hhCCCEEEEeCccHH
Confidence 334578999999995
No 89
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=96.83 E-value=0.0028 Score=62.63 Aligned_cols=63 Identities=17% Similarity=0.231 Sum_probs=42.2
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
|++++||+|.. ...++++++.. .++|.++++||+++. |... .+.++.+.. .+++.
T Consensus 2 ri~~isDiHg~---------------~~~l~~~l~~~~~~~~~d~~~~~GD~v~~-g~~~--~~~~~~l~~----~~~~~ 59 (207)
T cd07424 2 RDFVVGDIHGH---------------YSLLQKALDAVGFDPARDRLISVGDLIDR-GPES--LACLELLLE----PWFHA 59 (207)
T ss_pred CEEEEECCCCC---------------HHHHHHHHHHcCCCCCCCEEEEeCCcccC-CCCH--HHHHHHHhc----CCEEE
Confidence 68999999843 34566666653 368999999999953 3322 233333322 46889
Q ss_pred ccCCCccC
Q 007218 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
+.||||..
T Consensus 60 v~GNhe~~ 67 (207)
T cd07424 60 VRGNHEQM 67 (207)
T ss_pred eECCChHH
Confidence 99999964
No 90
>PRK04036 DNA polymerase II small subunit; Validated
Probab=96.72 E-value=0.0037 Score=70.16 Aligned_cols=82 Identities=13% Similarity=0.314 Sum_probs=50.8
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHH-h-------cCCCCEEEEcCccccCCCc-------------
Q 007218 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ-D-------LKNIDIVFHIGDICYANGY------------- 342 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~-~-------~~~pdfvl~~GDi~Y~~g~------------- 342 (612)
+..+++++++|+|.+... + ....+..+.+.+. . ..+++.|+++||++...+.
T Consensus 241 ~~~~~i~~ISDlHlgs~~----~---~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~ 313 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKE----F---LEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDI 313 (504)
T ss_pred CCccEEEEEcccCCCCcc----h---hHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhh
Confidence 345899999999987531 0 0111222222222 0 2579999999999953221
Q ss_pred ccHHHHHHHhhhccccCCCeEEccCCCccC
Q 007218 343 ISQWDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 343 ~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~ 372 (612)
..+++.+.+.++.+...+|+++++||||..
T Consensus 314 ~~~~~~l~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 314 YEQYEAAAEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHHHHHHHHhhhcCCeEEEecCCCcch
Confidence 012334455566667789999999999974
No 91
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=96.70 E-value=0.0026 Score=60.80 Aligned_cols=49 Identities=20% Similarity=0.377 Sum_probs=31.3
Q ss_pred HHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCCCccC
Q 007218 318 RQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 318 ~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~ 372 (612)
+.+.+...++|.|+++||++.. +....+ .+.++.+ ..|++.+.||||..
T Consensus 34 ~~~~~~~~~~d~vi~~GDl~~~-~~~~~~---~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 34 RNWNETVGPDDTVYHLGDFSFG-GKAGTE---LELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred HHHhhhcCCCCEEEEeCCCCCC-CChHHH---HHHHHhC--CCCeEEEeCCCCch
Confidence 3333334578999999999954 332222 2233322 35899999999974
No 92
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=96.65 E-value=0.004 Score=62.35 Aligned_cols=66 Identities=18% Similarity=0.251 Sum_probs=42.9
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC----------CCCEEEEcCccccCCCcccHHHHHHHhhhcccc
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPIAS 358 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~----------~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~ 358 (612)
+.++||+|.. ...+++++++.. ..|.++++||++ +.|..+ .+..+.+..+..
T Consensus 1 ~~vIGDIHG~---------------~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~I-DRGp~S--~~vl~~l~~l~~ 62 (222)
T cd07413 1 YDFIGDIHGH---------------AEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLI-DRGPEI--RELLEIVKSMVD 62 (222)
T ss_pred CEEEEeccCC---------------HHHHHHHHHHcCCCccccccCCCCCEEEEeCccc-CCCCCH--HHHHHHHHHhhc
Confidence 3689999853 456677776531 357999999999 555433 233343333333
Q ss_pred CCCeEEccCCCccC
Q 007218 359 TVPYMIASGNHERD 372 (612)
Q Consensus 359 ~vP~~~~~GNHD~~ 372 (612)
.-..+.+.||||..
T Consensus 63 ~~~~~~l~GNHE~~ 76 (222)
T cd07413 63 AGHALAVMGNHEFN 76 (222)
T ss_pred CCCEEEEEccCcHH
Confidence 33688899999963
No 93
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=96.58 E-value=0.063 Score=53.63 Aligned_cols=198 Identities=18% Similarity=0.180 Sum_probs=109.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+|++++||+=... |. ....+.+.++.++ -++||||..|-++ +.|.---|+.|.+.++. .+- .++.
T Consensus 1 mriLfiGDvvGk~--Gr-------~~v~~~Lp~lk~k-yk~dfvI~N~ENa-a~G~Git~k~y~~l~~~---G~d-viT~ 65 (266)
T COG1692 1 MRILFIGDVVGKP--GR-------KAVKEHLPQLKSK-YKIDFVIVNGENA-AGGFGITEKIYKELLEA---GAD-VITL 65 (266)
T ss_pred CeEEEEecccCcc--hH-------HHHHHHhHHHHHh-hcCcEEEEcCccc-cCCcCCCHHHHHHHHHh---CCC-EEec
Confidence 4899999983211 00 0011233344333 5799999999999 77766566776666543 233 3689
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCC--CCCCC-CHHHHHHHHHHHhh
Q 007218 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTE--QDWRE-GTEQYRFIEHCLAS 443 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~--~~~~~-g~~Q~~WL~~~L~~ 443 (612)
|||=++.+..-.|.+..+ ..-+-.++|....+.-|+-|+..+..+.+++-. ....+ -..-.+=+++.|..
T Consensus 66 GNH~wd~~ei~~~i~~~~-------~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~ 138 (266)
T COG1692 66 GNHTWDQKEILDFIDNAD-------RILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDE 138 (266)
T ss_pred ccccccchHHHHHhhccc-------ceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHh
Confidence 999987433211111100 000112344444566777788877666666532 11111 11223445566665
Q ss_pred ccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCcccc
Q 007218 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYK 523 (612)
Q Consensus 444 ~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~ 523 (612)
.+ .+++.+||-.|.-- +| | .++| -++.+-+|.+|+.=|+|.-.. +.++
T Consensus 139 ~~-~~~~~iiVDFHAEt--TS-----------E---K~a~-g~yldGrvsavvGTHTHV~Ta-----D~rI--------- 186 (266)
T COG1692 139 IK-LGTDLIIVDFHAET--TS-----------E---KNAF-GWYLDGRVSAVVGTHTHVPTA-----DERI--------- 186 (266)
T ss_pred Cc-cCCceEEEEccccc--hh-----------h---hhhh-heEEcCeEEEEEeccCccccc-----ccee---------
Confidence 42 45678999999542 11 1 1111 123355789999999998432 2222
Q ss_pred CCCCCeEEEE-ECCCCC
Q 007218 524 GSLNGTIHIA-AGGAGA 539 (612)
Q Consensus 524 ~~~~g~vyiv-~G~gG~ 539 (612)
-++|+-|++ +|+-|.
T Consensus 187 -L~~GTayiTDvGMtG~ 202 (266)
T COG1692 187 -LPKGTAYITDVGMTGP 202 (266)
T ss_pred -cCCCcEEEecCccccc
Confidence 236888887 677665
No 94
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=96.55 E-value=0.0051 Score=61.43 Aligned_cols=63 Identities=19% Similarity=0.249 Sum_probs=42.3
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
|++++||+|.. ...+++++++. .+.|-++++||++ +.|..+ .+-.+.+.. ..+..
T Consensus 18 ri~vigDIHG~---------------~~~L~~lL~~i~~~~~~D~li~lGDlv-DrGp~s--~~vl~~l~~----~~~~~ 75 (218)
T PRK11439 18 HIWLVGDIHGC---------------FEQLMRKLRHCRFDPWRDLLISVGDLI-DRGPQS--LRCLQLLEE----HWVRA 75 (218)
T ss_pred eEEEEEcccCC---------------HHHHHHHHHhcCCCcccCEEEEcCccc-CCCcCH--HHHHHHHHc----CCceE
Confidence 89999999854 45567777663 2578999999999 445432 122333322 24578
Q ss_pred ccCCCccC
Q 007218 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
+.||||..
T Consensus 76 v~GNHE~~ 83 (218)
T PRK11439 76 VRGNHEQM 83 (218)
T ss_pred eeCchHHH
Confidence 99999953
No 95
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=96.49 E-value=0.0061 Score=60.87 Aligned_cols=62 Identities=19% Similarity=0.338 Sum_probs=41.5
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
|++++||+|.. ...+++++++. .+.|.++++||++. .|... .+.++.++ .-.++.
T Consensus 16 ri~visDiHg~---------------~~~l~~~l~~~~~~~~~d~l~~lGD~vd-rG~~~--~~~l~~l~----~~~~~~ 73 (218)
T PRK09968 16 HIWVVGDIHGE---------------YQLLQSRLHQLSFCPETDLLISVGDNID-RGPES--LNVLRLLN----QPWFIS 73 (218)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHhcCCCCCCCEEEECCCCcC-CCcCH--HHHHHHHh----hCCcEE
Confidence 89999999853 34566666653 36899999999994 44322 12223222 124678
Q ss_pred ccCCCcc
Q 007218 365 ASGNHER 371 (612)
Q Consensus 365 ~~GNHD~ 371 (612)
+.||||.
T Consensus 74 v~GNHE~ 80 (218)
T PRK09968 74 VKGNHEA 80 (218)
T ss_pred EECchHH
Confidence 9999996
No 96
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.40 E-value=0.02 Score=70.87 Aligned_cols=48 Identities=27% Similarity=0.339 Sum_probs=30.3
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007218 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
.+...+|++.|..+ .... ...+ . .+....|.++ -+||++|.||.|...
T Consensus 233 ~gaDvII~l~H~G~--~~~~--~~~~-----~-en~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGI--ESEY--QSSG-----A-EDSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCc--CCCC--CCCC-----c-chHHHHHHHhCCCCcEEEeCCCcccc
Confidence 46788999999875 1111 0011 1 2233445545 489999999999964
No 97
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.40 E-value=0.052 Score=64.03 Aligned_cols=62 Identities=21% Similarity=0.271 Sum_probs=33.2
Q ss_pred cCCCCCCCCceEEEEEecCCCCCCCCCCcccc--cccChHHHHHHHHHhc--CCC-CEEEEcCccccC
Q 007218 277 ASPYPGQDSLQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYA 339 (612)
Q Consensus 277 T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~l~~~~--~~p-dfvl~~GDi~Y~ 339 (612)
+.|..+....++|+...|+|..-.. ...|.. -..+-+..+..++++. +++ -++|..||++..
T Consensus 106 ~~~~~~~~~~LtIL~TnDiHg~l~~-~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQG 172 (814)
T PRK11907 106 SKPVEGQTVDVRILSTTDLHTNLVN-YDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQG 172 (814)
T ss_pred CCCccCCceEEEEEEEEeecCCccc-ccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCC
Confidence 4455455556999999999975321 000110 0111233344444431 223 478899999953
No 98
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=96.36 E-value=0.093 Score=61.78 Aligned_cols=53 Identities=15% Similarity=0.205 Sum_probs=29.1
Q ss_pred ceEEEEEecCCCCCCCCCCcccc--cccChHHHHHHHHHhc--CCC-CEEEEcCccccC
Q 007218 286 LQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYA 339 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~l~~~~--~~p-dfvl~~GDi~Y~ 339 (612)
.++|+...|+|..-.. ...|.. -....+..+..++++. +++ -++|..||++..
T Consensus 39 ~L~IL~TnDiHg~l~~-~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqG 96 (780)
T PRK09418 39 NLRILETSDIHVNLMN-YDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQG 96 (780)
T ss_pred EEEEEEEeecCCCCcC-cCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCC
Confidence 4899999999976421 101110 0111233444455432 223 488899999943
No 99
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=96.36 E-value=0.074 Score=54.39 Aligned_cols=180 Identities=11% Similarity=0.078 Sum_probs=94.3
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHH-h---------cCCCCEEEEcCccccCCCc----------------
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ-D---------LKNIDIVFHIGDICYANGY---------------- 342 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~-~---------~~~pdfvl~~GDi~Y~~g~---------------- 342 (612)
+++++|.+.+... . ....++.+...+. + ..++.-+|++||.+...+.
T Consensus 2 i~~vSgL~ig~~~----~---~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~ 74 (257)
T cd07387 2 IALVSGLGLGGNA----E---SSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSS 74 (257)
T ss_pred EEEEcccccCCCc----c---chHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccc
Confidence 7889999987541 1 1112233333222 1 1245579999999964321
Q ss_pred ---ccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccc---cccccCCCCCCceEEEEEeCCE
Q 007218 343 ---ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVE---NMFYVPTENRAKFWYSTDYGMF 416 (612)
Q Consensus 343 ---~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~---~~f~~P~~~~~~~yYsfd~G~v 416 (612)
..+.+++.+.+..+.+.+|+.+++||||-....- ....-..|-.+-. ..+.. -.|. |.|+.+++
T Consensus 75 ~~~~~~~~~ld~~l~~l~~~i~V~imPG~~Dp~~~~l-----PQqplh~~lfp~s~~~~~~~~----vtNP-~~~~i~g~ 144 (257)
T cd07387 75 AASVEAVKELDNFLSQLASSVPVDLMPGEFDPANHSL-----PQQPLHRCLFPKSSNYSTLNL----VTNP-YEFSIDGV 144 (257)
T ss_pred hhhHHHHHHHHHHHHhhhcCCeEEECCCCCCcccccC-----CCCCCCHHHhhcccccCCcEE----eCCC-eEEEECCE
Confidence 1234445556667788999999999999642110 0000011100000 00111 1222 46999999
Q ss_pred EEEEEcCCCC-----CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCC
Q 007218 417 RFCIADTEQD-----WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYK 491 (612)
Q Consensus 417 ~Fi~LDT~~~-----~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~ 491 (612)
+|++.+...- +.+.+.-.+.|++.|+- | |--+.+...-+..... -.+++ .-+.-
T Consensus 145 ~vLgtsGqni~Di~ky~~~~~~l~~me~~L~w--r----------HlaPTaPDTL~~yP~~-~~Dpf--------vi~~~ 203 (257)
T cd07387 145 RVLGTSGQNVDDILKYSSLESRLDILERTLKW--R----------HIAPTAPDTLWCYPFT-DRDPF--------ILEEC 203 (257)
T ss_pred EEEEECCCCHHHHHHhCCCCCHHHHHHHHHHh--c----------ccCCCCCCccccccCC-CCCce--------eecCC
Confidence 9998887641 23344557788888864 1 3222122211100000 00122 12334
Q ss_pred CeEEEecccccceee
Q 007218 492 VDIAVFGHVHNYERI 506 (612)
Q Consensus 492 VdlvlsGH~H~YeRt 506 (612)
.+++++||.|.|+..
T Consensus 204 PhVyf~Gnq~~f~t~ 218 (257)
T cd07387 204 PHVYFAGNQPKFGTK 218 (257)
T ss_pred CCEEEeCCCcceeee
Confidence 899999999998765
No 100
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.29 E-value=0.009 Score=61.15 Aligned_cols=63 Identities=17% Similarity=0.283 Sum_probs=42.5
Q ss_pred EEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007218 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
.++||+|.. ...+++++++. ++.|.++++||++ +.|..+ .+..+.+..+. ..+..++
T Consensus 2 yvIGDIHG~---------------~~~L~~LL~~i~~~~~~D~Li~lGDlV-dRGp~s--~evl~~l~~l~--~~v~~Vl 61 (257)
T cd07422 2 YAIGDIQGC---------------YDELQRLLEKINFDPAKDRLWLVGDLV-NRGPDS--LETLRFVKSLG--DSAKTVL 61 (257)
T ss_pred EEEECCCCC---------------HHHHHHHHHhcCCCCCCCEEEEecCcC-CCCcCH--HHHHHHHHhcC--CCeEEEc
Confidence 589999854 34567776653 3579999999999 555433 23344443332 3678999
Q ss_pred CCCccC
Q 007218 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 62 GNHD~~ 67 (257)
T cd07422 62 GNHDLH 67 (257)
T ss_pred CCchHH
Confidence 999974
No 101
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=96.24 E-value=0.068 Score=53.99 Aligned_cols=171 Identities=16% Similarity=0.091 Sum_probs=83.9
Q ss_pred CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCC
Q 007218 325 KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR 404 (612)
Q Consensus 325 ~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~ 404 (612)
.++|||+..|.++ +.|.---.+.+.+.++ ..+-+ ++.|||=++.++.-.+.+.. ...-+-.++|....
T Consensus 26 ~~~DfVIaNgENa-a~G~Git~~~~~~L~~---~GvDv-iT~GNH~wdkkei~~~i~~~-------~~ilRPaN~p~~~p 93 (253)
T PF13277_consen 26 YGIDFVIANGENA-AGGFGITPKIAEELFK---AGVDV-ITMGNHIWDKKEIFDFIDKE-------PRILRPANYPPGTP 93 (253)
T ss_dssp -G-SEEEEE-TTT-TTTSS--HHHHHHHHH---HT-SE-EE--TTTTSSTTHHHHHHH--------SSEE--TTS-TT-S
T ss_pred cCCCEEEECCccc-CCCCCCCHHHHHHHHh---cCCCE-EecCcccccCcHHHHHHhcC-------CCcEECCCCCCCCC
Confidence 4799999999999 6665322222222221 23333 68899998753321111100 00001123455556
Q ss_pred CceEEEEEeCCEEEEEEcCC--CCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHH
Q 007218 405 AKFWYSTDYGMFRFCIADTE--QDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRES 482 (612)
Q Consensus 405 ~~~yYsfd~G~v~Fi~LDT~--~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~ 482 (612)
++-|..++.++..+.+++-. ....+-.-=+.-+++.|++. +.+++.+||=.|.=. .. .+.
T Consensus 94 G~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDFHAEa-------------TS----EK~ 155 (253)
T PF13277_consen 94 GRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDFHAEA-------------TS----EKQ 155 (253)
T ss_dssp SBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEEE-S--------------HH----HHH
T ss_pred cCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEeecCc-------------HH----HHH
Confidence 77899999999887777643 22222222344555555554 357788999899432 00 123
Q ss_pred HHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEE-ECCCCCC
Q 007218 483 LQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIA-AGGAGAS 540 (612)
Q Consensus 483 l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv-~G~gG~~ 540 (612)
-.-.+.+-+|.+|+.=|+|.- ..+.++ -++||-||+ +|+-|..
T Consensus 156 A~g~~lDGrvsaV~GTHTHVq-----TaDerI----------Lp~GTaYiTDvGMtG~~ 199 (253)
T PF13277_consen 156 AMGWYLDGRVSAVVGTHTHVQ-----TADERI----------LPGGTAYITDVGMTGPY 199 (253)
T ss_dssp HHHHHHBTTBSEEEEESSSS------BS--EE-----------TTS-EEES---EBEES
T ss_pred HHHHHhCCcEEEEEeCCCCcc-----Cchhhc----------cCCCCEEEecCccccCc
Confidence 334556789999999999982 222222 246888886 6776664
No 102
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.21 E-value=0.08 Score=49.29 Aligned_cols=80 Identities=13% Similarity=0.180 Sum_probs=42.4
Q ss_pred EEEEEecCCCCCCCC--CCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEc
Q 007218 288 QVIIFGDMGKDEADG--SNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 288 rf~v~GD~g~~~~~~--~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~ 365 (612)
.+.++||+|.+...- -..+.+...-....+....+-...-|.+.|+||++...... ..+...++.+..++ ..+
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~~---~~a~~IlerLnGrk--hlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANRE---RAAGLILERLNGRK--HLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccchh---hHHHHHHHHcCCcE--EEe
Confidence 466788888765321 01111111101112222222234568999999999543332 23444455554444 789
Q ss_pred cCCCccC
Q 007218 366 SGNHERD 372 (612)
Q Consensus 366 ~GNHD~~ 372 (612)
+||||-.
T Consensus 80 ~GNhDk~ 86 (186)
T COG4186 80 PGNHDKC 86 (186)
T ss_pred eCCCCCC
Confidence 9999975
No 103
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=95.80 E-value=0.026 Score=58.51 Aligned_cols=67 Identities=21% Similarity=0.332 Sum_probs=39.6
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--------CCCCEEEEcCccccCCCcccHHHHHHHhhhccccC
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--------KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--------~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~ 359 (612)
+++++||+|.. ...++++++.. ...+.++++||++ +.|..+ .+..+.+..+...
T Consensus 3 ~iyaIGDIHG~---------------~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyV-DRGPdS--~eVld~L~~l~~~ 64 (304)
T cd07421 3 VVICVGDIHGY---------------ISKLNNLWLNLQSALGPSDFASALVIFLGDYC-DRGPET--RKVIDFLISLPEK 64 (304)
T ss_pred eEEEEEeccCC---------------HHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcC-CCCCCH--HHHHHHHHHhhhc
Confidence 58999999854 23444444321 1356899999999 555432 2233332222221
Q ss_pred ---CCeEEccCCCccC
Q 007218 360 ---VPYMIASGNHERD 372 (612)
Q Consensus 360 ---vP~~~~~GNHD~~ 372 (612)
..++++.||||..
T Consensus 65 ~~~~~vv~LrGNHE~~ 80 (304)
T cd07421 65 HPKQRHVFLCGNHDFA 80 (304)
T ss_pred ccccceEEEecCChHH
Confidence 2468899999953
No 104
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=95.72 E-value=0.023 Score=46.55 Aligned_cols=74 Identities=16% Similarity=0.142 Sum_probs=43.0
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCC--CCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007218 168 APVYPRLAQGKVWNEMTVTWTSGYG--INEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~--~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+|..+++... ..+++.|+|..... .....-.|+|....+.. ...... .++-.+.+++
T Consensus 2 ~P~~l~v~~~-~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~-----~~~~~~---------------~~~~~~~~~i 60 (85)
T PF00041_consen 2 APENLSVSNI-SPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS-----DWQEVT---------------VPGNETSYTI 60 (85)
T ss_dssp SSEEEEEEEE-CSSEEEEEEEESSSTSSSESEEEEEEEETTSSS-----EEEEEE---------------EETTSSEEEE
T ss_pred cCcCeEEEEC-CCCEEEEEEECCCCCCCCeeEEEEEEEecccce-----eeeeee---------------eeeeeeeeee
Confidence 3555555332 67999999998741 11123456665443322 001111 0112336788
Q ss_pred cCCCCCCEEEEEEeeec
Q 007218 246 RELWPNAMYTYKLGHRL 262 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~ 262 (612)
++|+|++.|.++|....
T Consensus 61 ~~L~p~t~Y~~~v~a~~ 77 (85)
T PF00041_consen 61 TGLQPGTTYEFRVRAVN 77 (85)
T ss_dssp ESCCTTSEEEEEEEEEE
T ss_pred ccCCCCCEEEEEEEEEe
Confidence 99999999999998763
No 105
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=95.69 E-value=0.34 Score=48.91 Aligned_cols=88 Identities=16% Similarity=0.085 Sum_probs=49.4
Q ss_pred EEEEEeCC--EEEEEEcCCCCCC---C-------CHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCcc
Q 007218 408 WYSTDYGM--FRFCIADTEQDWR---E-------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFA 475 (612)
Q Consensus 408 yYsfd~G~--v~Fi~LDT~~~~~---~-------g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~ 475 (612)
+..++.++ +.|+.+.+..... . ...-.+-+++.+++.. .+...+|++.|-..-|.. . .
T Consensus 123 ~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr-~~~D~vIv~~H~G~e~~~------~---p 192 (239)
T cd07381 123 PAILEVNGIKVAFLAYTYGTNGIPLAAGARPGGVNPLDLERIAADIAEAK-KKADIVIVSLHWGVEYSY------Y---P 192 (239)
T ss_pred cEEEEECCEEEEEEEEECCCCCCcCcccCCccccCccCHHHHHHHHHHHh-hcCCEEEEEecCcccCCC------C---C
Confidence 45567777 5556655432110 0 0111234555555543 347899999996531110 0 0
Q ss_pred chhhHHHHHHHHHhCCCeEEEecccccceee
Q 007218 476 EPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 476 ~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
... ...+...+.+.++|+++.||.|..+-.
T Consensus 193 ~~~-~~~la~~l~~~G~D~IiG~H~Hv~q~~ 222 (239)
T cd07381 193 TPE-QRELARALIDAGADLVIGHHPHVLQGI 222 (239)
T ss_pred CHH-HHHHHHHHHHCCCCEEEcCCCCcCCCe
Confidence 111 345555566679999999999987643
No 106
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=95.67 E-value=0.026 Score=56.09 Aligned_cols=65 Identities=20% Similarity=0.281 Sum_probs=40.9
Q ss_pred EEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhcccc-CCCeEEcc
Q 007218 290 IIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS-TVPYMIAS 366 (612)
Q Consensus 290 ~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~-~vP~~~~~ 366 (612)
.++||+|.. ...+.++++.. ...|.++++||++. .|... .+..+.+..+.. ..+++.+.
T Consensus 1 ~~igDiHg~---------------~~~l~~~l~~~~~~~~d~li~lGD~vd-rg~~~--~~~l~~l~~~~~~~~~~~~l~ 62 (225)
T cd00144 1 YVIGDIHGC---------------LDDLLRLLEKIGFPPNDKLIFLGDYVD-RGPDS--VEVIDLLLALKILPDNVILLR 62 (225)
T ss_pred CEEeCCCCC---------------HHHHHHHHHHhCCCCCCEEEEECCEeC-CCCCc--HHHHHHHHHhcCCCCcEEEEc
Confidence 378999843 34556666653 36899999999994 44332 222222222211 45789999
Q ss_pred CCCccC
Q 007218 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 63 GNHe~~ 68 (225)
T cd00144 63 GNHEDM 68 (225)
T ss_pred cCchhh
Confidence 999975
No 107
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=95.63 E-value=0.13 Score=59.78 Aligned_cols=46 Identities=24% Similarity=0.335 Sum_probs=27.5
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccc
Q 007218 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNY 503 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Y 503 (612)
....-+|++.|..+ ..+. .....+. .... +.+ -+||++|.||.|..
T Consensus 217 ~gaDvII~LsH~G~--~~d~----~~~~aen----~~~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGI--SADP----YKAMAEN----SVYY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCc--CCCC----ccccccc----hhHH-HhcCCCCCEEEeCCCCcc
Confidence 45788999999875 2111 0011111 1112 334 47999999999985
No 108
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=95.51 E-value=0.028 Score=58.02 Aligned_cols=64 Identities=19% Similarity=0.318 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+..++||+|.. ...+++++++. ...|-++++||++ +.|..+ .+-.+.+..+. -....
T Consensus 2 ~~YvIGDIHGc---------------~daL~~LL~~i~f~~~~D~l~~lGDlV-dRGP~s--levL~~l~~l~--~~~~~ 61 (279)
T TIGR00668 2 ATYLIGDLHGC---------------YDELQALLERVEFDPGQDTLWLTGDLV-ARGPGS--LEVLRYVKSLG--DAVRL 61 (279)
T ss_pred cEEEEEcccCC---------------HHHHHHHHHHhCcCCCCCEEEEeCCcc-CCCCCH--HHHHHHHHhcC--CCeEE
Confidence 46899999854 34567777664 2578999999999 445432 12233333221 13568
Q ss_pred ccCCCcc
Q 007218 365 ASGNHER 371 (612)
Q Consensus 365 ~~GNHD~ 371 (612)
+.||||.
T Consensus 62 VlGNHD~ 68 (279)
T TIGR00668 62 VLGNHDL 68 (279)
T ss_pred EEChhHH
Confidence 9999996
No 109
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=95.42 E-value=0.16 Score=58.74 Aligned_cols=46 Identities=30% Similarity=0.333 Sum_probs=27.6
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccc
Q 007218 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNY 503 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Y 503 (612)
.....+|++.|..+ ..+.. ....+. ... .+.+ -+||++|.||.|..
T Consensus 194 ~gaDvII~LsH~G~--~~d~~----~~~~en----~~~-~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGI--SADPY----QPGAEN----SAY-YLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCc--CCCcc----ccccch----HHH-HHhcCCCCCEEEcCCCCcc
Confidence 45788999999875 21110 111111 111 2344 48999999999985
No 110
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=95.11 E-value=0.11 Score=54.40 Aligned_cols=177 Identities=19% Similarity=0.281 Sum_probs=96.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCCCc--------ccHHH---HHHHhhh
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGY--------ISQWD---QFTAQIE 354 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~g~--------~~~wd---~f~~~i~ 354 (612)
+|++|-|++|..-. ....++..+-+. ..++|++|..||+---+.. ...+. .|++...
T Consensus 1 MrIaVqGCcHG~Ld-----------~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYs 69 (456)
T KOG2863|consen 1 MRIAVQGCCHGELD-----------NIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYS 69 (456)
T ss_pred CceeeecccchhHH-----------HHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhC
Confidence 47899999974311 012333333332 2479999999998742221 11222 3443332
Q ss_pred -ccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCC--CCceEE-----EEEeCCEEEEEEcCC--
Q 007218 355 -PIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTEN--RAKFWY-----STDYGMFRFCIADTE-- 424 (612)
Q Consensus 355 -~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~--~~~~yY-----sfd~G~v~Fi~LDT~-- 424 (612)
.+.+.+|.+++=||||... +. ..+|..+ ..+.|| ...+|+||+-.|+.-
T Consensus 70 ge~~APVlTIFIGGNHEAsn-----yL----------------~eLpyGGwVApNIyYlG~agVv~~~gvRIggiSGI~k 128 (456)
T KOG2863|consen 70 GEIKAPVLTIFIGGNHEASN-----YL----------------QELPYGGWVAPNIYYLGYAGVVNFGGVRIGGISGIYK 128 (456)
T ss_pred CcccCceeEEEecCchHHHH-----HH----------------HhcccCceeccceEEeeecceEEECCEEEeeccchhh
Confidence 2456789999999999631 11 1112111 123444 467899999888753
Q ss_pred -CCCCCC-----------------HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCC------C-cc----
Q 007218 425 -QDWREG-----------------TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEG------S-FA---- 475 (612)
Q Consensus 425 -~~~~~g-----------------~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~------~-~~---- 475 (612)
+++..| -.+++ ...|++. +.|--|++.|-=+ -+-. .|++.. . ++
T Consensus 129 ~~dy~kgh~E~ppyn~stiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP-~GI~-~yGd~~~LLr~KPFFrqeie 201 (456)
T KOG2863|consen 129 EHDYRKGHFEWPPYNNSTIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWP-RGIY-YYGDKKQLLRLKPFFRQEIE 201 (456)
T ss_pred hhhcccCCCCCCCccchhhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCC-cchh-hcCCHHHHHhcCcHHHHHHh
Confidence 343221 11111 1233332 4566788888632 1110 111100 0 11
Q ss_pred -chhhHHHHHHHHHhCCCeEEEeccccc
Q 007218 476 -EPMGRESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 476 -~~~~r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
..+|...++.||++.+...+|+.|.|.
T Consensus 202 ~~~LGSp~~~eLL~~LkP~yWfsAHLH~ 229 (456)
T KOG2863|consen 202 EGKLGSPALEELLEDLKPQYWFSAHLHV 229 (456)
T ss_pred cCCcCChHHHHHHHHhCcchhhhhhHhh
Confidence 123456888999999999999999997
No 111
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=95.09 E-value=0.028 Score=56.92 Aligned_cols=173 Identities=23% Similarity=0.256 Sum_probs=94.3
Q ss_pred CEEEEcCccccCCCc-------ccHHHHHHHh----hhccccCCCeEEccCCCccCCCCC---CCCCCCC--C---CCCc
Q 007218 328 DIVFHIGDICYANGY-------ISQWDQFTAQ----IEPIASTVPYMIASGNHERDWPGT---GSFYGNM--D---SGGE 388 (612)
Q Consensus 328 dfvl~~GDi~Y~~g~-------~~~wd~f~~~----i~~l~~~vP~~~~~GNHD~~~~~~---~~~y~~~--d---sgge 388 (612)
==++..||++.+.|- ..++.+|... .-++...+|+|+-.||||.+-+.. -.+|... | ....
T Consensus 128 lGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~Hr 207 (392)
T COG5555 128 LGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYHR 207 (392)
T ss_pred eeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhcC
Confidence 346677899965432 1223333211 234456799999999999873221 1122100 0 0000
Q ss_pred cccccccccccCC--CCCCceEEEEEeCCEEEEEEcCCCCC-CCC-HHHHHHHHHHHhhccCCCCCeEEEEEcccc-ccC
Q 007218 389 CGVLVENMFYVPT--ENRAKFWYSTDYGMFRFCIADTEQDW-REG-TEQYRFIEHCLASVDRQKQPWLIFLAHRVL-GYS 463 (612)
Q Consensus 389 ~g~~~~~~f~~P~--~~~~~~yYsfd~G~v~Fi~LDT~~~~-~~g-~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~-~ys 463 (612)
.++-+.. +.|. -+..+.-||+++|++|.+-+-+...- .++ ..-+-||+.+|..... +..-++++.|.-. .++
T Consensus 208 ~~vf~Kp--pvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~aa-dgrpv~LfqhyGwdtfs 284 (392)
T COG5555 208 SDVFWKP--PVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSAA-DGRPVYLFQHYGWDTFS 284 (392)
T ss_pred cCcccCC--CCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeecc-CCCceeehhhhCcccee
Confidence 0000110 1121 12234568999999988776543211 111 2236799999987543 3344788888632 234
Q ss_pred CCCCcc------CCCC-----ccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007218 464 SDLSYA------VEGS-----FAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 464 s~~~~~------~~~~-----~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
+..|.. +.|. ..++. |..|...++-|+|--.+.||.|.+.
T Consensus 285 teawdpAsrT~Dd~Gsgaphww~a~e-r~all~~lqGYNvvg~fhGhkhd~~ 335 (392)
T COG5555 285 TEAWDPASRTLDDTGSGAPHWWPAPE-RGALLFFLQGYNVVGTFHGHKHDFN 335 (392)
T ss_pred ccccCchhcccccCCCCCCCCCCCCC-cchHHHhhcCceeEEeccccccccc
Confidence 433321 1111 12233 7889999999999999999999863
No 112
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=94.65 E-value=0.078 Score=53.13 Aligned_cols=84 Identities=14% Similarity=0.236 Sum_probs=50.1
Q ss_pred eEEEEEecCCCCCCCCC---Ccc-cccccC-hHHHHHHHHHhcCCCCEEEEcCccccCCCc--ccHHHHHHHhhhccccC
Q 007218 287 QQVIIFGDMGKDEADGS---NEY-NNFQRG-SLNTTRQLIQDLKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIAST 359 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~---~~~-~~~~~~-s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~~~ 359 (612)
-+.++++|.|.+-...- ..+ -.+|.. ....+.++++. .+|+-++++||+-.+-+. ..+|+.....++.+..+
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~-~~p~~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIER-YGPKRLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHh-cCCCEEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 36899999998642100 000 011211 12344445554 689999999999987554 44555433333333332
Q ss_pred CCeEEccCCCccC
Q 007218 360 VPYMIASGNHERD 372 (612)
Q Consensus 360 vP~~~~~GNHD~~ 372 (612)
-++.+.||||-.
T Consensus 99 -evi~i~GNHD~~ 110 (235)
T COG1407 99 -EVIIIRGNHDNG 110 (235)
T ss_pred -cEEEEeccCCCc
Confidence 599999999975
No 113
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=94.59 E-value=0.072 Score=56.23 Aligned_cols=67 Identities=21% Similarity=0.182 Sum_probs=41.5
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCC---CCEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCe
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPY 362 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~---pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~ 362 (612)
+++++||+|.. ...+.++++...- -+-.+++||++ ++|..+. +-+..+-.+. ..--+
T Consensus 52 ~~~vvGDiHG~---------------~~dL~~il~~~g~~~~~~~~lFLGDyV-DRG~~s~--Evl~ll~~lk~~~p~~v 113 (321)
T cd07420 52 QVTICGDLHGK---------------LDDLFLIFYKNGLPSPENPYVFNGDFV-DRGKRSI--EILIILFAFFLVYPNEV 113 (321)
T ss_pred CeEEEEeCCCC---------------HHHHHHHHHHcCCCCccceEEEecccc-CCCCCcH--HHHHHHHHHhhcCCCcE
Confidence 58999999753 4556777765322 25799999999 5564331 1222221111 12247
Q ss_pred EEccCCCccC
Q 007218 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~~~GNHD~~ 372 (612)
+.+.||||..
T Consensus 114 ~llRGNHE~~ 123 (321)
T cd07420 114 HLNRGNHEDH 123 (321)
T ss_pred EEecCchhhh
Confidence 8899999975
No 114
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=93.40 E-value=0.17 Score=53.12 Aligned_cols=67 Identities=19% Similarity=0.261 Sum_probs=41.3
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC--CCCEEEEcCccccCCCcccHHHHHHHhhhccccCC--CeE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTV--PYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~--~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~v--P~~ 363 (612)
+++++||+|.. ...+.++++... ..+-++++||++ ++|..+ -+-+..+..+.-.. -++
T Consensus 44 ~i~ViGDIHG~---------------~~dL~~l~~~~g~~~~~~ylFLGDyV-DRG~~s--~Evi~lL~~lki~~p~~v~ 105 (305)
T cd07416 44 PVTVCGDIHGQ---------------FYDLLKLFEVGGSPANTRYLFLGDYV-DRGYFS--IECVLYLWALKILYPKTLF 105 (305)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEECCcc-CCCCCh--HHHHHHHHHHHhhcCCCEE
Confidence 58999999853 344555665433 347899999999 556432 12222222222222 478
Q ss_pred EccCCCccC
Q 007218 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.++||||..
T Consensus 106 lLRGNHE~~ 114 (305)
T cd07416 106 LLRGNHECR 114 (305)
T ss_pred EEeCCCcHH
Confidence 899999974
No 115
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=93.28 E-value=1.8 Score=52.13 Aligned_cols=130 Identities=15% Similarity=0.146 Sum_probs=72.5
Q ss_pred ceEEEEEEeeccc--ceEEEEEecCCCCcEEEEeccceec----cCCCCCCc-ceeeecCCCCcEEEEEEeCCCCCCCcc
Q 007218 126 KGSLKLQLINQRS--DFSFVLFTNGLLNPKVVAVSNKVTF----TNPNAPVY-PRLAQGKVWNEMTVTWTSGYGINEAEP 198 (612)
Q Consensus 126 ~~~~~~~l~n~r~--~~~f~~~~~~~~~p~~~a~s~~~~~----~~~~~P~~-~~La~~~~~~~m~V~W~T~~~~~~~~~ 198 (612)
......+|-+++. +|.|.+-..+..-+- -.|..|++ .-|.+|-+ +.| .-.+.++++|.|...........
T Consensus 571 ~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g--~sS~~i~V~Tlsd~PsaPP~Nl~l-ev~sStsVrVsW~pP~~~t~ng~ 647 (1381)
T KOG4221|consen 571 NNATEYTINGLEKYTEYSIRVVAYNSAGSG--VSSADITVRTLSDVPSAPPQNLSL-EVVSSTSVRVSWLPPPSETQNGQ 647 (1381)
T ss_pred cCccEEEeecCCCccceEEEEEEecCCCCC--CCCCceEEEeccCCCCCCCcceEE-EecCCCeEEEEccCCCcccccce
Confidence 4455566667664 788877664322100 01222222 24556655 666 44468999999998754332223
Q ss_pred EE----EEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEE
Q 007218 199 FV----EWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQ 274 (612)
Q Consensus 199 ~V----~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~ 274 (612)
.. +|+..+... ....++. .|....-.+.+|+|+|.|..||.....+|....|++..
T Consensus 648 itgYkIRy~~~~~~~----~~~~t~v----------------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~ 707 (1381)
T KOG4221|consen 648 ITGYKIRYRKLSRED----EVNETVV----------------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVS 707 (1381)
T ss_pred EEEEEEEecccCccc----ccceeec----------------ccchhhhHhhcCCCCceEEEEEEEeccCCCCCccccee
Confidence 33 333222111 1111111 11112224688999999999998765567666788888
Q ss_pred EEcC
Q 007218 275 FKAS 278 (612)
Q Consensus 275 F~T~ 278 (612)
+.|+
T Consensus 708 aeT~ 711 (1381)
T KOG4221|consen 708 AETP 711 (1381)
T ss_pred ccCc
Confidence 8886
No 116
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=93.23 E-value=0.18 Score=54.25 Aligned_cols=67 Identities=19% Similarity=0.252 Sum_probs=41.4
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC--CC-CEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCe
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK--NI-DIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPY 362 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~--~p-dfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~ 362 (612)
++.++||+|.. ...+.++++... .. +.++++||++ +.|..+. +.+..+..+. ..--+
T Consensus 67 ~i~VvGDIHG~---------------~~dL~~ll~~~g~~~~~~~ylFLGDyV-DRGp~Sl--Evl~lL~~lki~~p~~v 128 (377)
T cd07418 67 EVVVVGDVHGQ---------------LHDVLFLLEDAGFPDQNRFYVFNGDYV-DRGAWGL--ETFLLLLSWKVLLPDRV 128 (377)
T ss_pred CEEEEEecCCC---------------HHHHHHHHHHhCCCCCCceEEEecccc-CCCCChH--HHHHHHHHHhhccCCeE
Confidence 58999999853 455666776532 22 3589999999 5564331 2222222221 22347
Q ss_pred EEccCCCccC
Q 007218 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~~~GNHD~~ 372 (612)
+.++||||..
T Consensus 129 ~lLRGNHE~~ 138 (377)
T cd07418 129 YLLRGNHESK 138 (377)
T ss_pred EEEeeecccc
Confidence 8899999975
No 117
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=93.01 E-value=0.15 Score=56.08 Aligned_cols=54 Identities=13% Similarity=0.174 Sum_probs=36.8
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCC
Q 007218 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG 341 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g 341 (612)
..+||++..|.|.+...... .....+..+++.|+.- .++.|||+..||+...+.
T Consensus 12 ntirILVaTD~HlGY~EkD~---vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDA---VRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred cceEEEEeecCccccccCCc---ccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 35999999999986532111 1123456667666542 378999999999998763
No 118
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=92.89 E-value=1.1 Score=51.88 Aligned_cols=95 Identities=21% Similarity=0.304 Sum_probs=58.3
Q ss_pred CCCCCCc-ceeeec-CCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007218 165 NPNAPVY-PRLAQG-KVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~P~~-~~La~~-~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
|..+|.. .+|-+. ...+++++.|.-.+..+. ..-.|+|.+++... .+|.. . ..-.
T Consensus 439 ~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~e-------~~~~~----------~----~t~~ 497 (996)
T KOG0196|consen 439 NQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDEDE-------RSYST----------L----KTKT 497 (996)
T ss_pred cccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeeccccc-------cceeE----------E----eccc
Confidence 3344443 333333 357999999987653110 12345555543211 11110 0 0123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007218 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
.+|+++||+|||.|-+||......|-..+|....|.|.+.
T Consensus 498 ~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 498 TTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLPS 537 (996)
T ss_pred ceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecCc
Confidence 5789999999999999999875556666899999999885
No 119
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=92.58 E-value=0.34 Score=50.05 Aligned_cols=67 Identities=18% Similarity=0.215 Sum_probs=41.6
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhcc--ccCCCeE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++ +.|.... +....+..+ ...--++
T Consensus 29 ~i~vvGDiHG~---------------~~~l~~ll~~~~~~~~~~~vfLGD~V-DrG~~s~--e~l~~l~~lk~~~p~~v~ 90 (271)
T smart00156 29 PVTVCGDIHGQ---------------FDDLLRLFDLNGPPPDTNYVFLGDYV-DRGPFSI--EVILLLFALKILYPNRVV 90 (271)
T ss_pred CEEEEEeCcCC---------------HHHHHHHHHHcCCCCCceEEEeCCcc-CCCCChH--HHHHHHHHHHhcCCCCEE
Confidence 58999999743 34556666542 3467899999999 5564331 222222111 1223578
Q ss_pred EccCCCccC
Q 007218 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.++||||..
T Consensus 91 llrGNHE~~ 99 (271)
T smart00156 91 LLRGNHESR 99 (271)
T ss_pred EEeccccHH
Confidence 999999985
No 120
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=92.17 E-value=0.3 Score=50.87 Aligned_cols=67 Identities=19% Similarity=0.235 Sum_probs=40.9
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCeE
Q 007218 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (612)
.+.++||+|.. ...+.++++.. ...+-++++||++ ++|..+. +.+..+..+. ..-.++
T Consensus 43 ~i~vvGDIHG~---------------~~dL~~ll~~~~~~~~~~~lfLGDyV-DRG~~s~--evl~ll~~lk~~~p~~v~ 104 (285)
T cd07415 43 PVTVCGDIHGQ---------------FYDLLELFRVGGDPPDTNYLFLGDYV-DRGYYSV--ETFLLLLALKVRYPDRIT 104 (285)
T ss_pred CEEEEEeCCCC---------------HHHHHHHHHHcCCCCCCeEEEEeEEC-CCCcCHH--HHHHHHHHHhhcCCCcEE
Confidence 38999999743 34455565542 3356788999999 5564332 2222222221 233588
Q ss_pred EccCCCccC
Q 007218 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.++||||..
T Consensus 105 llrGNHE~~ 113 (285)
T cd07415 105 LLRGNHESR 113 (285)
T ss_pred EEecccchH
Confidence 999999974
No 121
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=91.84 E-value=1.3 Score=35.55 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=24.7
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEE
Q 007218 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQF 275 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F 275 (612)
-...+.+.+|.|++.|.++|.....++...|+....|
T Consensus 55 ~~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~ 91 (93)
T cd00063 55 SETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTV 91 (93)
T ss_pred cccEEEEccccCCCEEEEEEEEECCCccCCCcccccc
Confidence 3466778999999999999987533333344443344
No 122
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=91.70 E-value=0.37 Score=50.41 Aligned_cols=25 Identities=20% Similarity=0.361 Sum_probs=21.9
Q ss_pred hhHHHHHHHHHhCCCeEEEeccccc
Q 007218 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
.|.+.++..+++++.++++=||.-.
T Consensus 220 fg~~~~~~Fl~~n~l~~iiR~He~~ 244 (293)
T cd07414 220 FGKDVVAKFLNKHDLDLICRAHQVV 244 (293)
T ss_pred cCHHHHHHHHHHcCCeEEEECCccc
Confidence 3578999999999999999999854
No 123
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=91.28 E-value=0.48 Score=49.99 Aligned_cols=23 Identities=9% Similarity=0.403 Sum_probs=20.8
Q ss_pred hhHHHHHHHHHhCCCeEEEeccc
Q 007218 478 MGRESLQKLWQKYKVDIAVFGHV 500 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~ 500 (612)
.+.+.+...++++++++++=||.
T Consensus 240 fg~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 240 FGPDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred ECHHHHHHHHHHCCCeEEEEech
Confidence 35789999999999999999997
No 124
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=91.05 E-value=12 Score=45.34 Aligned_cols=193 Identities=17% Similarity=0.104 Sum_probs=104.7
Q ss_pred EcccccccCCCcccEEEEEEecC-----CCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCccCCCcceEEeccCCCcccc
Q 007218 49 ASPSILGMKGQNSDWLTVEYNSP-----NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKS 123 (612)
Q Consensus 49 ~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 123 (612)
.+|.=|.-.|.....++|+|... +-..-.++=.|.|..... .+..--+....==+|.|.+.+-.+|
T Consensus 718 ~~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~-------~W~~~~v~~~d~~~~V~~~~st~~~-- 788 (1051)
T KOG3513|consen 718 VNPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADK-------EWKEVIVSNQDQPRYVVSNESTEPF-- 788 (1051)
T ss_pred cCCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCc-------ccceeEecccCCceEEEcCCCCCCc--
Confidence 34554544455668899999984 334455666777865441 0110001000113566666542223
Q ss_pred ccceEEEEEEeecccceEEEEEecCCCCcEEEEeccceeccCCCCCCcceeeecCCCCcEEEEEEeCCC--CCCCccEEE
Q 007218 124 TGKGSLKLQLINQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYG--INEAEPFVE 201 (612)
Q Consensus 124 ~g~~~~~~~l~n~r~~~~f~~~~~~~~~p~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~T~~~--~~~~~~~V~ 201 (612)
=.-.++++.+|.+-+=. ..++.+..|..= .-+.+|..+.+ ...+.++|.|.|....- .....-.|+
T Consensus 789 -tpyevKVqa~N~~GeGp--------~s~~~v~~S~Ed--~P~~ap~~~~~-~~~s~s~~~v~W~~~~~~nG~l~gY~v~ 856 (1051)
T KOG3513|consen 789 -TPYEVKVQAINDQGEGP--------ESQVTVGYSGED--EPPVAPTKLSA-KPLSSSEVNLSWKPPLWDNGKLTGYEVK 856 (1051)
T ss_pred -ceeEEEEEEecCCCCCC--------CCceEEEEcCCC--CCCCCCcccee-ecccCceEEEEecCcCccCCccceeEEE
Confidence 24568888999886422 123344444221 12456666665 66678999999943321 123445788
Q ss_pred EccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007218 202 WGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 202 yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
|....+... + ..... -.+-.-.+.|+||+|+|.|+..|..-...|...-|...+-+|.++|
T Consensus 857 Y~~~~~~~~-~-~~~~~-----------------i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt~k~p 917 (1051)
T KOG3513|consen 857 YWKINEKEG-S-LSRVQ-----------------IAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTTKKAP 917 (1051)
T ss_pred EEEcCCCcc-c-cccee-----------------ecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccccCCC
Confidence 876443320 0 11000 1134556789999999999999986543343333444444455444
No 125
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=91.02 E-value=0.52 Score=49.51 Aligned_cols=66 Identities=21% Similarity=0.259 Sum_probs=40.2
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccC--CCeEE
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAST--VPYMI 364 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~--vP~~~ 364 (612)
+.++||+|.. ...+.++++.. ...+-++++||++ ++|.... +....+..+.-. --++.
T Consensus 45 i~vvGDIHG~---------------~~~L~~l~~~~~~~~~~~~lfLGDyV-DRG~~s~--evl~ll~~lk~~~p~~v~l 106 (303)
T PTZ00239 45 VNVCGDIHGQ---------------FYDLQALFKEGGDIPNANYIFIGDFV-DRGYNSV--ETMEYLLCLKVKYPGNITL 106 (303)
T ss_pred EEEEEeCCCC---------------HHHHHHHHHhcCCCCCceEEEeeeEc-CCCCCHH--HHHHHHHHhhhcCCCcEEE
Confidence 8899999743 34556666542 2346789999999 5564332 222222222112 23789
Q ss_pred ccCCCccC
Q 007218 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
+.||||..
T Consensus 107 lrGNHE~~ 114 (303)
T PTZ00239 107 LRGNHESR 114 (303)
T ss_pred EecccchH
Confidence 99999974
No 126
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=90.94 E-value=2.1 Score=39.65 Aligned_cols=85 Identities=26% Similarity=0.337 Sum_probs=52.7
Q ss_pred HHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCce
Q 007218 481 ESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHG 560 (612)
Q Consensus 481 ~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~G 560 (612)
+.|.-|-++..||+.++||+|.++... .+|-.||--|++-.... . +........
T Consensus 97 ~sL~~LaRqldvDILl~G~Th~f~Aye------------------~eg~ffvnPGSaTGAfn-~-------~~t~~~~PS 150 (183)
T KOG3325|consen 97 ESLALLARQLDVDILLTGHTHKFEAYE------------------HEGKFFVNPGSATGAFN-V-------SDTDIIVPS 150 (183)
T ss_pred HHHHHHHHhcCCcEEEeCCceeEEEEE------------------eCCcEEeCCCcccCCCc-c-------cccCCCCCc
Confidence 467777778999999999999988763 24666776676532211 0 111124567
Q ss_pred EEEEEEecCCeEEEEEEECCCCcE-EEEEEEEe
Q 007218 561 FVKLTAFDHSNLLFEYKKSRDGKV-YDSFRISR 592 (612)
Q Consensus 561 y~~l~v~n~~~L~~~~~~~~dG~v-~D~f~i~k 592 (612)
|+.+++ .++.+..-.++--||+| +|.....|
T Consensus 151 FvLmDi-qg~~~v~YvY~lidgeVkVdki~ykK 182 (183)
T KOG3325|consen 151 FVLMDI-QGSTVVTYVYRLIDGEVKVDKIEYKK 182 (183)
T ss_pred eEEEEe-cCCEEEEEEeeeeCCcEEEEEEEecC
Confidence 889988 55555443344556764 45555444
No 127
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=90.93 E-value=0.64 Score=50.98 Aligned_cols=78 Identities=18% Similarity=0.381 Sum_probs=50.8
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc-------CCCCEEEEcCccccCCC-c------------cc
Q 007218 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL-------KNIDIVFHIGDICYANG-Y------------IS 344 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~-------~~pdfvl~~GDi~Y~~g-~------------~~ 344 (612)
..+++++++|.|.+.. ++. ...+...++-. .+...++.+||++..-| + ..
T Consensus 224 e~v~v~~isDih~GSk----~F~------~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~ 293 (481)
T COG1311 224 ERVYVALISDIHRGSK----EFL------EDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYE 293 (481)
T ss_pred cceEEEEEeeeecccH----HHH------HHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchH
Confidence 3588999999998642 321 11222233222 23479999999995322 1 23
Q ss_pred HHHHHHHhhhccccCCCeEEccCCCccC
Q 007218 345 QWDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 345 ~wd~f~~~i~~l~~~vP~~~~~GNHD~~ 372 (612)
|++++-+.+..+-..+-+++.|||||.-
T Consensus 294 qy~~~A~~L~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 294 QYEELAEFLDQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred HHHHHHHHHhhCCCCceEEEecCCCCcc
Confidence 5566666666667788899999999975
No 128
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=90.79 E-value=0.59 Score=49.36 Aligned_cols=25 Identities=8% Similarity=0.291 Sum_probs=21.8
Q ss_pred hhHHHHHHHHHhCCCeEEEeccccc
Q 007218 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
.|.+.+...+++++.++++-||.-.
T Consensus 231 fg~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 231 FGPDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred eCHHHHHHHHHHcCCcEEEECCccc
Confidence 3578999999999999999999854
No 129
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=90.06 E-value=0.79 Score=48.44 Aligned_cols=25 Identities=20% Similarity=0.258 Sum_probs=22.1
Q ss_pred hhHHHHHHHHHhCCCeEEEeccccc
Q 007218 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
.|.+.++..+++++.++++=||.-.
T Consensus 229 FG~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 229 FSQEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred cCHHHHHHHHHhCCCcEEEEcCccc
Confidence 3578999999999999999999854
No 130
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=89.95 E-value=0.62 Score=48.71 Aligned_cols=25 Identities=16% Similarity=0.295 Sum_probs=21.7
Q ss_pred hhHHHHHHHHHhCCCeEEEeccccc
Q 007218 478 MGRESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 478 ~~r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
.|.+.++..++++++++++=||.-.
T Consensus 222 fg~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 222 FGEDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred cCHHHHHHHHHHcCCcEEEEcCccc
Confidence 3578999999999999999999843
No 131
>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1 (Q61026 from SWISSPROT), and thus enhances transcriptional activation by a number of nuclear receptors. CoCoA has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region [].
Probab=87.84 E-value=3.5 Score=46.29 Aligned_cols=93 Identities=23% Similarity=0.381 Sum_probs=60.8
Q ss_pred EEEEEec---CCCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCccCCCcceEEeccCCCccccccc---eEEEEE---Ee
Q 007218 64 LTVEYNS---PNPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYSSPQYKSTGK---GSLKLQ---LI 134 (612)
Q Consensus 64 v~~~~~~---~~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~---~~~~~~---l~ 134 (612)
|+..|+- ..|+..||||||=-.-++. .-...|.|+... .+| ..|+ ..+.|. |.
T Consensus 22 v~C~Ytlt~~~~ps~~DWIGiFKVGw~s~----------------rdY~Tf~Wa~~p-~~~-~~~s~~~~~V~F~ayyLP 83 (546)
T PF07888_consen 22 VECHYTLTPGFHPSSKDWIGIFKVGWSST----------------RDYYTFVWAPVP-ENY-VEGSAVNCQVQFQAYYLP 83 (546)
T ss_pred eEEEEecCCCCCCCCCCeeEEeecCCCch----------------hheeeEEeeccC-ccc-cCCCccceEEEECcccCC
Confidence 7777775 2899999999996543222 345788888642 344 3443 467775 55
Q ss_pred ec-ccceEEEEEecCCCCcEEEEeccceeccCCCCCCcceeeecC
Q 007218 135 NQ-RSDFSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGK 178 (612)
Q Consensus 135 n~-r~~~~f~~~~~~~~~p~~~a~s~~~~~~~~~~P~~~~La~~~ 178 (612)
+. -..|.|.+....- .+.+.|.++.|..|+ |+..-+++..
T Consensus 84 k~~~e~YqfcYv~~~g---~V~G~S~pFqf~~~~-p~eeLvtle~ 124 (546)
T PF07888_consen 84 KDDDEFYQFCYVDQKG---EVRGASTPFQFRAPK-PLEELVTLED 124 (546)
T ss_pred CCCCCeEEEEEECCCc---cEEEecCCcccCCCC-ccccceeecc
Confidence 43 3357887765432 388999999999765 6655555544
No 132
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=87.42 E-value=1.6 Score=44.38 Aligned_cols=64 Identities=17% Similarity=0.218 Sum_probs=44.3
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeee
Q 007218 433 QYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 433 Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
+.+.+++++++++ .+..++||..|--.-|.. ...+. ...+...+.+.++|+|+.+|.|..|-..
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~~~---------~p~~~-q~~~a~~lidaGaDiIiG~HpHv~q~~E 232 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEYEN---------YPTPE-QRELARALIDAGADIIIGHHPHVIQPVE 232 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCCCC---------CCCHH-HHHHHHHHHHcCCCEEEeCCCCcccceE
Confidence 4578888888874 678899999995421111 11122 4456666667899999999999987553
No 133
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=85.51 E-value=2.9 Score=47.00 Aligned_cols=56 Identities=21% Similarity=0.237 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-C-CCeE-EEecccccc
Q 007218 431 TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-Y-KVDI-AVFGHVHNY 503 (612)
Q Consensus 431 ~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~-~Vdl-vlsGH~H~Y 503 (612)
-.|.+|-.+.++. .+..-+|+++|.|. ... .. ++.+...+++ + ++++ ||-||.|..
T Consensus 211 i~~~~~~~~m~~~---~~idlii~lgH~~~--~~~-----------~e-~~~~~~~ir~~~p~t~IqviGGHshir 269 (602)
T KOG4419|consen 211 ITQSEWEQDMVNT---TDIDLIIALGHSPV--RDD-----------DE-WKSLHAEIRKVHPNTPIQVIGGHSHIR 269 (602)
T ss_pred HhccchHHHHhhc---cCccEEEEeccccc--ccc-----------hh-hhhHHHHHhhhCCCCceEEECchhhhh
Confidence 3577887777765 56778999999996 211 11 2223333334 3 6788 999999983
No 134
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=84.27 E-value=2.4 Score=42.78 Aligned_cols=59 Identities=20% Similarity=0.184 Sum_probs=36.2
Q ss_pred HHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceee
Q 007218 437 IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 437 L~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
+++.++++. .+...+|++.|--.-|.. . .... ...+...+.+.+||+++.||.|..+..
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~------~---p~~~-~~~~A~~l~~~G~DvIiG~H~H~~~~~ 220 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQY------E---PTDE-QRELAHALIDAGADVVIGHHPHVLQPI 220 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCC------C---CCHH-HHHHHHHHHHcCCCEEEcCCCCcCCce
Confidence 444444442 357899999996541111 0 0111 234555555578999999999987744
No 135
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=82.30 E-value=8.4 Score=29.49 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=19.1
Q ss_pred EEEEEecCCCCCCEEEEEEeee
Q 007218 240 IHTGFLRELWPNAMYTYKLGHR 261 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~ 261 (612)
-+...+.+|+|++.|.++|...
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~ 77 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAV 77 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEE
Confidence 4678899999999999999764
No 136
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=81.41 E-value=3.1 Score=42.59 Aligned_cols=65 Identities=23% Similarity=0.436 Sum_probs=43.6
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCe--
Q 007218 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY-- 362 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~-- 362 (612)
.-.||+.++|.|.-..+ +++...-|+.+|+||.. +.|...+-..|-+.+- +.|+
T Consensus 60 ~~~r~VcisdtH~~~~~-------------------i~~~p~gDvlihagdfT-~~g~~~ev~~fn~~~g----slph~y 115 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD-------------------INDIPDGDVLIHAGDFT-NLGLPEEVIKFNEWLG----SLPHEY 115 (305)
T ss_pred CceEEEEecCcccccCc-------------------cccCCCCceEEeccCCc-cccCHHHHHhhhHHhc----cCccee
Confidence 34799999999864321 11346789999999999 5565544445554443 2343
Q ss_pred -EEccCCCccCC
Q 007218 363 -MIASGNHERDW 373 (612)
Q Consensus 363 -~~~~GNHD~~~ 373 (612)
+++.||||...
T Consensus 116 KIVIaGNHELtF 127 (305)
T KOG3947|consen 116 KIVIAGNHELTF 127 (305)
T ss_pred eEEEeeccceee
Confidence 68999999864
No 137
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=78.44 E-value=3.4 Score=40.53 Aligned_cols=74 Identities=15% Similarity=0.253 Sum_probs=42.6
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHh---cCCCCEEEEcCccccCCCcc---------cHH-HHH----HH
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD---LKNIDIVFHIGDICYANGYI---------SQW-DQF----TA 351 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~---~~~pdfvl~~GDi~Y~~g~~---------~~w-d~f----~~ 351 (612)
|++++|.+.+.. ....+.++.+++. ..+|+.+|++|+.+...... ... ..+ .+
T Consensus 1 Iv~~Sg~~~~~~----------~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (209)
T PF04042_consen 1 IVFASGPFLDSD----------NLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDS 70 (209)
T ss_dssp EEEEES--CTTT-----------HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHH
T ss_pred CEEEecCccCCC----------HhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHH
Confidence 578888887632 1124556666653 24699999999999653211 111 112 23
Q ss_pred hhhccccCCCeEEccCCCccC
Q 007218 352 QIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 352 ~i~~l~~~vP~~~~~GNHD~~ 372 (612)
.++.+...+++..++|+||..
T Consensus 71 ~~~~i~~~~~vvlvPg~~D~~ 91 (209)
T PF04042_consen 71 FLESILPSTQVVLVPGPNDPT 91 (209)
T ss_dssp HHCCCHCCSEEEEE--TTCTT
T ss_pred HHhhcccccEEEEeCCCcccc
Confidence 345566789999999999975
No 138
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=70.25 E-value=98 Score=38.24 Aligned_cols=126 Identities=14% Similarity=0.143 Sum_probs=70.9
Q ss_pred ccceEEEEEEeecc--cceEEEEEecCCCCcEEEEeccceec-cCCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEE
Q 007218 124 TGKGSLKLQLINQR--SDFSFVLFTNGLLNPKVVAVSNKVTF-TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFV 200 (612)
Q Consensus 124 ~g~~~~~~~l~n~r--~~~~f~~~~~~~~~p~~~a~s~~~~~-~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V 200 (612)
++.| +.+.+.|.- ..|.|+.-.-+..- --..|.++.. ++|..|.+ .=+.+-.+.++.|+|....- ...+..
T Consensus 479 ss~g-~~~tv~nl~p~t~Y~~rv~A~n~~g--~g~sS~pLkV~t~pEgp~~-~~a~ats~~ti~v~WepP~~--~n~~I~ 552 (1381)
T KOG4221|consen 479 SSPG-IQVTVQNLSPLTMYFFRVRAKNEAG--SGESSAPLKVTTQPEGPVQ-LQAYATSPTTILVTWEPPPF--GNGPIT 552 (1381)
T ss_pred cCCc-eEEEeeecccceeEEEEEeccCccc--CCccCCceEEecCCCCCcc-ccccccCcceEEEEecCCCC--CCCCce
Confidence 4555 666666655 35666655432210 0011222322 24445665 32344468999999998742 123344
Q ss_pred EEc----cCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEE
Q 007218 201 EWG----PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFK 276 (612)
Q Consensus 201 ~yg----~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~ 276 (612)
.|. .++.. ....++ .--++.+|.||+|.|.|.|||......|...-|...+|+
T Consensus 553 ~yk~~ys~~~~~------~~~~~~-----------------~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~ 609 (1381)
T KOG4221|consen 553 GYKLFYSEDDTG------KELRVE-----------------NNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVR 609 (1381)
T ss_pred EEEEEEEcCCCC------ceEEEe-----------------cCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEE
Confidence 443 21110 011111 124667889999999999999987666666667788888
Q ss_pred cC
Q 007218 277 AS 278 (612)
Q Consensus 277 T~ 278 (612)
|.
T Consensus 610 Tl 611 (1381)
T KOG4221|consen 610 TL 611 (1381)
T ss_pred ec
Confidence 75
No 139
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=66.13 E-value=21 Score=37.17 Aligned_cols=76 Identities=11% Similarity=0.064 Sum_probs=48.1
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC-------CCCEEEEcCccccCC-----CcccHHHHHHHhh
Q 007218 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-------NIDIVFHIGDICYAN-----GYISQWDQFTAQI 353 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~-------~pdfvl~~GDi~Y~~-----g~~~~wd~f~~~i 353 (612)
..+|+++||.+... +..++.++++.+..+ .|-.+|+.|+.+... +....+.+.++.+
T Consensus 27 ~~~~VilSDV~LD~-----------p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~L 95 (291)
T PTZ00235 27 RHNWIIMHDVYLDS-----------PYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKL 95 (291)
T ss_pred ceEEEEEEeeccCC-----------HHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHH
Confidence 47899999998864 234455555555432 288999999988542 1122333333333
Q ss_pred h--------ccccCCCeEEccCCCccC
Q 007218 354 E--------PIASTVPYMIASGNHERD 372 (612)
Q Consensus 354 ~--------~l~~~vP~~~~~GNHD~~ 372 (612)
. .+..+.-++.+||-.|-.
T Consensus 96 a~llls~fp~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 96 SVMLISKFKLILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHHHHhChHHHhcCeEEEECCCCCCC
Confidence 2 345667789999999963
No 140
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=64.91 E-value=1.4e+02 Score=31.43 Aligned_cols=19 Identities=16% Similarity=0.324 Sum_probs=16.7
Q ss_pred EEecCCCCCCEEEEEEeee
Q 007218 243 GFLRELWPNAMYTYKLGHR 261 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~ 261 (612)
.+|.||+||+.|-..|...
T Consensus 262 etI~~L~PG~~Yl~dV~~~ 280 (300)
T PF10179_consen 262 ETIKGLKPGTTYLFDVYVN 280 (300)
T ss_pred eecccCCCCcEEEEEEEEe
Confidence 4799999999999888875
No 141
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=49.67 E-value=42 Score=34.05 Aligned_cols=67 Identities=21% Similarity=0.302 Sum_probs=38.5
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCC--CCEEEEcCccccCCCcccHHHHHHHhh-hccccCCCeEEc
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN--IDIVFHIGDICYANGYISQWDQFTAQI-EPIASTVPYMIA 365 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~--pdfvl~~GDi~Y~~g~~~~wd~f~~~i-~~l~~~vP~~~~ 365 (612)
+.+.||+|.. ..-+..+.+-... -.=-+++||.+ ++|+.+. +.|+=.+ -++.-.--+..+
T Consensus 45 vtvcGDIHGQ---------------f~Dllelf~igG~~~~t~YLFLGDyV-DRG~~Sv-Et~lLLl~lK~rYP~ritLi 107 (303)
T KOG0372|consen 45 VTVCGDIHGQ---------------FYDLLELFRIGGDVPETNYLFLGDYV-DRGYYSV-ETFLLLLALKVRYPDRITLI 107 (303)
T ss_pred cEEeecccch---------------HHHHHHHHHhCCCCCCCceEeecchh-ccccchH-HHHHHHHHHhhcCcceeEEe
Confidence 6789999743 2334455543111 12467789999 6776542 3443222 112223346789
Q ss_pred cCCCccC
Q 007218 366 SGNHERD 372 (612)
Q Consensus 366 ~GNHD~~ 372 (612)
.||||-+
T Consensus 108 RGNHEsR 114 (303)
T KOG0372|consen 108 RGNHESR 114 (303)
T ss_pred eccchhh
Confidence 9999976
No 142
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=46.08 E-value=26 Score=37.32 Aligned_cols=24 Identities=21% Similarity=0.340 Sum_probs=20.2
Q ss_pred hHHHHHHHHHhCCCeEEEeccccc
Q 007218 479 GRESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 479 ~r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
+.+.+++++.+.++||++-+|.=.
T Consensus 232 g~~~v~~f~~~~~ldlivRaHqvv 255 (331)
T KOG0374|consen 232 GPAVVEDFCKKLDLDLIVRAHQVV 255 (331)
T ss_pred cHHHHHHHHHHhCcceEEEcCccc
Confidence 467889999999999999999533
No 143
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=44.45 E-value=38 Score=37.29 Aligned_cols=70 Identities=9% Similarity=0.255 Sum_probs=45.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007218 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
.||++.||....- ...++.++++-+.....|+++.+|+..-.+....+|..+.+-...+ .+|.|+.-
T Consensus 6 ~kILv~Gd~~Gr~-----------~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~~~v--PiptY~~g 72 (528)
T KOG2476|consen 6 AKILVCGDVEGRF-----------DELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGTKKV--PIPTYFLG 72 (528)
T ss_pred ceEEEEcCccccH-----------HHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCCccC--ceeEEEec
Confidence 5899999984321 1123445555555556999999999995455566666665544433 56777766
Q ss_pred CCC
Q 007218 367 GNH 369 (612)
Q Consensus 367 GNH 369 (612)
+|-
T Consensus 73 ~~~ 75 (528)
T KOG2476|consen 73 DNA 75 (528)
T ss_pred CCC
Confidence 665
No 144
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=37.70 E-value=46 Score=28.48 Aligned_cols=36 Identities=17% Similarity=0.018 Sum_probs=21.4
Q ss_pred EEEecCCCCCCEEEEEEeeec--CCCCccccceEEEEc
Q 007218 242 TGFLRELWPNAMYTYKLGHRL--FNGTYIWSSEYQFKA 277 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~--~~g~~~~S~~~~F~T 277 (612)
.++|.+|+|++.|.-+|.... .+....||+..-..|
T Consensus 68 ~~~l~~L~p~t~YCv~V~~~~~~~~~~s~~S~~~C~~t 105 (106)
T PF09294_consen 68 SVTLSDLKPGTNYCVSVQAFSPSQNKNSQPSEPQCITT 105 (106)
T ss_dssp EEEEES--TTSEEEEEEEEEECSSTEEEEEBSEEEEE-
T ss_pred EEEEeCCCCCCCEEEEEEEEeccCCCcCCCCCCEeEeC
Confidence 457999999999999998731 122234565544443
No 145
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=36.31 E-value=3e+02 Score=33.84 Aligned_cols=112 Identities=15% Similarity=0.232 Sum_probs=66.3
Q ss_pred eEEEEEEeecccc--eEEEEEecCCCCcEEEEeccceeccCCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEcc
Q 007218 127 GSLKLQLINQRSD--FSFVLFTNGLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGP 204 (612)
Q Consensus 127 ~~~~~~l~n~r~~--~~f~~~~~~~~~p~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~ 204 (612)
|-|+++=+.++.. |.++.=.. +.. +-+.++.+.-.-|.+|..+++ -+-..+.++|+|.-+.+ +-.|...|-.
T Consensus 577 g~L~i~nv~l~~~G~Y~C~aqT~-~Ds--~s~~A~l~V~gpPgpP~~v~~-~~i~~t~~~lsW~~g~d--n~SpI~~Y~i 650 (1051)
T KOG3513|consen 577 GRLTIANVSLEDSGKYTCVAQTA-LDS--ASARADLLVRGPPGPPPDVHV-DDISDTTARLSWSPGSD--NNSPIEKYTI 650 (1051)
T ss_pred cceEEEeeccccCceEEEEEEEe-ecc--hhcccceEEecCCCCCCceeE-eeeccceEEEEeecCCC--CCCCceEEeE
Confidence 4577776667653 44443321 111 223334444556778887777 33357899999998865 2345777764
Q ss_pred CCC----CCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeee
Q 007218 205 KGG----DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHR 261 (612)
Q Consensus 205 ~~~----~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~ 261 (612)
... ..|..++ +. |.+ +.|- +++++.+|.|-..|.+||..-
T Consensus 651 q~rt~~~~~W~~v~-~v----------p~~-----~~~~-~sa~vv~L~Pwv~YeFRV~Av 694 (1051)
T KOG3513|consen 651 QFRTPFPGKWKAVT-TV----------PGN-----ITGD-ESATVVNLSPWVEYEFRVVAV 694 (1051)
T ss_pred EecCCCCCcceEee-EC----------CCc-----ccCc-cceeEEccCCCcceEEEEEEE
Confidence 322 1232222 11 111 2334 679999999999999999865
No 146
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=32.29 E-value=1.5e+02 Score=31.25 Aligned_cols=20 Identities=20% Similarity=0.247 Sum_probs=16.3
Q ss_pred EEEecCCCCCCEEEEEEeee
Q 007218 242 TGFLRELWPNAMYTYKLGHR 261 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~ 261 (612)
.-+|.+|+|+|.||+-|..-
T Consensus 16 ~~t~~~L~p~t~YyfdVF~v 35 (300)
T PF10179_consen 16 NQTLSGLKPDTTYYFDVFVV 35 (300)
T ss_pred eEEeccCCCCCeEEEEEEEE
Confidence 34678999999999998754
No 147
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=29.42 E-value=73 Score=27.44 Aligned_cols=24 Identities=21% Similarity=0.404 Sum_probs=20.2
Q ss_pred CCeEEEEEecCCCCCCEEEEEEee
Q 007218 237 PGYIHTGFLRELWPNAMYTYKLGH 260 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~ 260 (612)
.+-+.++.+.++.+|+.|.|+|..
T Consensus 43 ~~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 43 YGGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred cCCEEEEEECCCCCCCEEEEEECC
Confidence 345788899999999999999954
No 148
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=28.33 E-value=46 Score=34.23 Aligned_cols=50 Identities=22% Similarity=0.405 Sum_probs=33.2
Q ss_pred HHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCe-EEEeccccc
Q 007218 435 RFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVD-IAVFGHVHN 502 (612)
Q Consensus 435 ~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vd-lvlsGH~H~ 502 (612)
+.|+.+|+.-.+-.-| ++-.|.| + ..+ .+.+.+|+++++.| |||+||+-.
T Consensus 115 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E----~eq-p~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 115 EYLRKCLKLYKKIGVP--VVGIHCK-----------E----KEM-PEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHHhCCc--eEEEEec-----------c----hhc-hHHHHHHHHHhCCCEEEEeCchhh
Confidence 5799999875332222 3333322 1 123 57899999999999 789999954
No 149
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=27.78 E-value=1.3e+02 Score=30.89 Aligned_cols=66 Identities=23% Similarity=0.290 Sum_probs=36.8
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc-CCCC-EEEEcCccccCCCcccHHHHHHHhhhccc--cCCCeEE
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL-KNID-IVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYMI 364 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~-~~pd-fvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~~~ 364 (612)
+.+.||.|.. ..-+.++.+.- ..|| -.++.||.+ +.|+.+ ++-...+-.+. -.--+-.
T Consensus 62 vtvcGDvHGq---------------f~dl~ELfkiGG~~pdtnylfmGDyv-drGy~S--vetVS~lva~Kvry~~rvti 123 (319)
T KOG0371|consen 62 VTVCGDVHGQ---------------FHDLIELFKIGGLAPDTNYLFMGDYV-DRGYYS--VETVSLLVALKVRYPDRVTI 123 (319)
T ss_pred eEEecCcchh---------------HHHHHHHHHccCCCCCcceeeeeeec-ccccch--HHHHHHHHHhhccccceeEE
Confidence 7889999753 23344444421 1233 356789999 666654 23333322221 1223567
Q ss_pred ccCCCccC
Q 007218 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
++||||.+
T Consensus 124 lrGNHEsr 131 (319)
T KOG0371|consen 124 LRGNHESR 131 (319)
T ss_pred ecCchHHH
Confidence 99999965
No 150
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=27.60 E-value=3.1e+02 Score=23.63 Aligned_cols=23 Identities=17% Similarity=0.257 Sum_probs=18.7
Q ss_pred HHHHHHHHHhCCCeEEEeccccc
Q 007218 480 RESLQKLWQKYKVDIAVFGHVHN 502 (612)
Q Consensus 480 r~~l~~ll~k~~VdlvlsGH~H~ 502 (612)
.+.+....+++++|+++.|+.+.
T Consensus 74 ~~~I~~~~~~~~~dllviG~~~~ 96 (124)
T cd01987 74 AEAIVEFAREHNVTQIVVGKSRR 96 (124)
T ss_pred HHHHHHHHHHcCCCEEEeCCCCC
Confidence 46788888999999888888764
No 151
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=27.06 E-value=45 Score=38.21 Aligned_cols=50 Identities=28% Similarity=0.414 Sum_probs=31.0
Q ss_pred HHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEccCCCccCC
Q 007218 317 TRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIASGNHERDW 373 (612)
Q Consensus 317 ~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~ 373 (612)
+..++++ --+|-+-++|||. ++|... |..++.+. ..--+=+-|||||.-|
T Consensus 176 l~~lIqr-L~VDhLHIvGDIy-DRGp~p--d~ImD~Lm---~~hsvDIQWGNHDIlW 225 (640)
T PF06874_consen 176 LSELIQR-LAVDHLHIVGDIY-DRGPRP--DKIMDRLM---NYHSVDIQWGNHDILW 225 (640)
T ss_pred HHHHHHH-Hhhhheeeccccc-CCCCCh--hHHHHHHh---cCCCccccccchHHHH
Confidence 3444443 3578889999998 666543 44444432 2233446899999765
No 152
>TIGR02039 CysD sulfate adenylyltransferase, small subunit. In Escherichia coli, ATP sulfurylase is a heterodimer composed of two subunits encoded by cysD and cysN, with APS kinase encoded by cysC. These genes are located in a unidirectionally transcribed gene cluster, and have been shown to be required for the synthesis of sulfur-containing amino acids. Homologous to this E.coli activation pathway are nodPQH gene products found among members of the Rhizobiaceae family. These gene products have been shown to exhibit ATP sulfurase and APS kinase activity, yet are involved in Nod factor sulfation, and sulfation of other macromolecules.
Probab=26.02 E-value=2.4e+02 Score=29.61 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=42.9
Q ss_pred EEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEE
Q 007218 416 FRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIA 495 (612)
Q Consensus 416 v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlv 495 (612)
+.++.+||...| .+.+++.++.-+.. +-+.+|+.......++...+..........+-++.|...+.++++|++
T Consensus 50 ~~vl~IDTG~~F---~Et~efrd~~a~~~---gl~l~v~~~~~~~~~g~~~~~~~~~~~c~vlK~~pL~~al~e~g~da~ 123 (294)
T TIGR02039 50 FPLLHVDTGWKF---REMIAFRDHMVAKY---GLRLIVHSNEEGIADGINPFTEGSALHTDIMKTEALRQALDKNQFDAA 123 (294)
T ss_pred eEEEEEecCCCC---HHHHHHHHHHHHHh---CCCEEEEechhhhhcCccccccChHHHhhHHHHHHHHHHHHHcCCCEE
Confidence 567889998765 36777777665542 333333222111101111110000001112224677888889999999
Q ss_pred Eeccccc
Q 007218 496 VFGHVHN 502 (612)
Q Consensus 496 lsGH~H~ 502 (612)
+.||.=.
T Consensus 124 itG~RRD 130 (294)
T TIGR02039 124 FGGARRD 130 (294)
T ss_pred EecCChh
Confidence 9999543
No 153
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=25.07 E-value=58 Score=33.70 Aligned_cols=23 Identities=26% Similarity=0.535 Sum_probs=20.5
Q ss_pred HHHHHHHHHhCCCe-EEEeccccc
Q 007218 480 RESLQKLWQKYKVD-IAVFGHVHN 502 (612)
Q Consensus 480 r~~l~~ll~k~~Vd-lvlsGH~H~ 502 (612)
.+.+..|+.+++.| |||+||+-.
T Consensus 143 p~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 143 PEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred hHHHHHHHHHcCCCEEEEeCchhh
Confidence 67899999999999 789999875
No 154
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=24.67 E-value=63 Score=32.20 Aligned_cols=65 Identities=25% Similarity=0.497 Sum_probs=36.8
Q ss_pred EEEEecCCCCCCCCCCcccccccChHHHHHHHHHh---cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCC--eE
Q 007218 289 VIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD---LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVP--YM 363 (612)
Q Consensus 289 f~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~---~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP--~~ 363 (612)
+-+.||+|.. ..-+.++.+. .++.. -|+.||.+ ++|+.+ .+.|.-.+ -+..+.| +-
T Consensus 48 VTvCGDIHGQ---------------FyDL~eLFrtgG~vP~tn-YiFmGDfV-DRGyyS-LEtfT~l~-~LkaryP~~IT 108 (306)
T KOG0373|consen 48 VTVCGDIHGQ---------------FYDLLELFRTGGQVPDTN-YIFMGDFV-DRGYYS-LETFTLLL-LLKARYPAKIT 108 (306)
T ss_pred eeEeeccchh---------------HHHHHHHHHhcCCCCCcc-eEEecccc-cccccc-HHHHHHHH-HHhhcCCceeE
Confidence 5689999743 2234455553 23333 45679999 667644 23333222 2233333 45
Q ss_pred EccCCCccC
Q 007218 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
...||||-+
T Consensus 109 LlRGNHEsR 117 (306)
T KOG0373|consen 109 LLRGNHESR 117 (306)
T ss_pred Eeeccchhh
Confidence 689999975
No 155
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=24.67 E-value=98 Score=25.57 Aligned_cols=20 Identities=15% Similarity=0.190 Sum_probs=17.7
Q ss_pred eEEEEEecCCCCCCEEEEEEe
Q 007218 239 YIHTGFLRELWPNAMYTYKLG 259 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~ 259 (612)
-++++++.++ +|..|.|+|.
T Consensus 40 G~W~~~v~~~-~g~~Y~y~v~ 59 (85)
T cd02853 40 GWFEAEVPGA-AGTRYRYRLD 59 (85)
T ss_pred cEEEEEeCCC-CCCeEEEEEC
Confidence 4678899999 9999999996
No 156
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=24.64 E-value=89 Score=27.61 Aligned_cols=23 Identities=26% Similarity=0.576 Sum_probs=20.0
Q ss_pred CeEEEEEecCCCCCCEEEEEEee
Q 007218 238 GYIHTGFLRELWPNAMYTYKLGH 260 (612)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~ 260 (612)
+-++++.+.++.+|+.|.|||..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 45788999999999999999963
No 157
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=24.64 E-value=95 Score=26.47 Aligned_cols=24 Identities=13% Similarity=0.059 Sum_probs=20.4
Q ss_pred CCeEEEEEecCCCCCCEEEEEEee
Q 007218 237 PGYIHTGFLRELWPNAMYTYKLGH 260 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~ 260 (612)
.+-++++.+.++.+|..|.||+..
T Consensus 45 ~~gvw~~~v~~~~~g~~Y~y~i~~ 68 (100)
T cd02860 45 ENGVWSVTLDGDLEGYYYLYEVKV 68 (100)
T ss_pred CCCEEEEEeCCccCCcEEEEEEEE
Confidence 345788899999999999999964
No 158
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=22.35 E-value=1.1e+02 Score=28.90 Aligned_cols=18 Identities=17% Similarity=0.133 Sum_probs=14.9
Q ss_pred EecCCCCCCEEEEEEeee
Q 007218 244 FLRELWPNAMYTYKLGHR 261 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~ 261 (612)
.+++|.|||+|+.++...
T Consensus 105 qVtNL~pGTkY~isY~Vt 122 (184)
T PF07353_consen 105 QVTNLQPGTKYYISYLVT 122 (184)
T ss_pred EeeccCCCcEEEEEEEEe
Confidence 579999999998777654
No 159
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=22.04 E-value=1.8e+02 Score=29.90 Aligned_cols=73 Identities=14% Similarity=0.108 Sum_probs=50.1
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCccc-HHH--HHHHhhhccccCCCe
Q 007218 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYIS-QWD--QFTAQIEPIASTVPY 362 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~-~wd--~f~~~i~~l~~~vP~ 362 (612)
..+|++.+|.+.... -..++.+++ .+|+.+|+.|=.+|--|+.. .|+ .-.+.++.+....+-
T Consensus 176 ~~~i~faSDvqGp~~-------------~~~l~~i~e--~~P~v~ii~GPpty~lg~r~~~~~~E~~irNl~~ii~~~~~ 240 (304)
T COG2248 176 KSSIVFASDVQGPIN-------------DEALEFILE--KRPDVLIIGGPPTYLLGYRVGPKSLEKGIRNLERIIEETNA 240 (304)
T ss_pred CeEEEEcccccCCCc-------------cHHHHHHHh--cCCCEEEecCCchhHhhhhcChHHHHHHHHHHHHHHHhCcc
Confidence 468899999874332 245777877 69999999999998766532 232 334556666666666
Q ss_pred EEccCCCccCC
Q 007218 363 MIASGNHERDW 373 (612)
Q Consensus 363 ~~~~GNHD~~~ 373 (612)
-.++.-|=.+.
T Consensus 241 ~lViDHHllRD 251 (304)
T COG2248 241 TLVIDHHLLRD 251 (304)
T ss_pred eEEEeehhhcC
Confidence 67777776654
Done!