Query 007224
Match_columns 612
No_of_seqs 276 out of 3261
Neff 8.2
Searched_HMMs 46136
Date Thu Mar 28 20:39:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007224.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/007224hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02939 transferase, transfer 100.0 7.9E-69 1.7E-73 601.0 49.6 467 82-590 479-970 (977)
2 PRK14099 glycogen synthase; Pr 100.0 2.1E-67 4.6E-72 577.1 48.9 466 82-589 1-481 (485)
3 PRK14098 glycogen synthase; Pr 100.0 4.6E-67 1E-71 575.0 49.8 467 84-588 5-487 (489)
4 TIGR02095 glgA glycogen/starch 100.0 3.1E-63 6.7E-68 546.4 49.0 459 85-587 1-473 (473)
5 PLN02316 synthase/transferase 100.0 1.9E-62 4.2E-67 559.6 49.4 434 78-588 581-1035(1036)
6 PRK00654 glgA glycogen synthas 100.0 3.2E-62 6.9E-67 536.7 49.1 453 85-589 1-465 (466)
7 cd03791 GT1_Glycogen_synthase_ 100.0 4.1E-59 8.9E-64 514.4 48.5 462 86-585 1-475 (476)
8 COG0297 GlgA Glycogen synthase 100.0 5.7E-59 1.2E-63 498.7 42.3 463 85-589 1-480 (487)
9 TIGR02094 more_P_ylases alpha- 100.0 6.1E-40 1.3E-44 363.6 40.1 470 87-585 1-599 (601)
10 TIGR02468 sucrsPsyn_pln sucros 100.0 1.1E-39 2.3E-44 372.1 38.7 444 82-590 167-674 (1050)
11 cd03796 GT1_PIG-A_like This fa 100.0 5.6E-39 1.2E-43 346.2 37.1 364 86-590 1-371 (398)
12 PRK10307 putative glycosyl tra 100.0 8.4E-39 1.8E-43 346.3 37.7 395 85-589 1-410 (412)
13 TIGR02472 sucr_P_syn_N sucrose 100.0 1.1E-38 2.3E-43 348.1 38.4 391 99-585 24-439 (439)
14 TIGR03449 mycothiol_MshA UDP-N 100.0 8.7E-39 1.9E-43 345.1 37.3 386 87-589 1-404 (405)
15 TIGR02149 glgA_Coryne glycogen 100.0 1.7E-38 3.7E-43 340.4 37.7 373 85-588 1-388 (388)
16 PLN02871 UDP-sulfoquinovose:DA 100.0 2.1E-38 4.6E-43 348.3 38.1 375 82-590 56-438 (465)
17 PRK15484 lipopolysaccharide 1, 100.0 1.4E-37 3.1E-42 332.9 37.0 361 86-588 4-379 (380)
18 TIGR02470 sucr_synth sucrose s 100.0 5.5E-37 1.2E-41 344.0 39.1 431 84-584 255-745 (784)
19 cd04962 GT1_like_5 This family 100.0 9.6E-37 2.1E-41 324.3 38.0 365 85-587 1-371 (371)
20 PRK15427 colanic acid biosynth 100.0 3.3E-36 7.1E-41 324.8 36.6 276 227-587 117-406 (406)
21 PLN00142 sucrose synthase 100.0 7.7E-36 1.7E-40 334.7 35.1 322 228-584 408-768 (815)
22 KOG1111 N-acetylglucosaminyltr 100.0 4.6E-37 9.9E-42 305.1 21.5 367 85-591 1-371 (426)
23 cd03818 GT1_ExpC_like This fam 100.0 1E-34 2.2E-39 312.7 39.3 378 86-582 1-396 (396)
24 TIGR03088 stp2 sugar transfera 100.0 3.2E-35 6.9E-40 313.8 34.1 358 85-587 2-373 (374)
25 cd03802 GT1_AviGT4_like This f 100.0 7.5E-35 1.6E-39 304.9 35.5 329 85-585 1-335 (335)
26 PRK10125 putative glycosyl tra 100.0 6.5E-35 1.4E-39 313.9 33.2 378 85-587 1-405 (405)
27 cd03800 GT1_Sucrose_synthase T 100.0 1.5E-34 3.2E-39 310.0 35.3 380 85-581 7-397 (398)
28 cd04299 GT1_Glycogen_Phosphory 100.0 6.2E-34 1.3E-38 320.4 39.8 472 86-585 87-688 (778)
29 cd03792 GT1_Trehalose_phosphor 100.0 5.4E-34 1.2E-38 304.5 37.1 359 86-587 1-372 (372)
30 PLN02846 digalactosyldiacylgly 100.0 5.9E-35 1.3E-39 313.6 29.1 380 83-587 3-392 (462)
31 cd03805 GT1_ALG2_like This fam 100.0 2.1E-34 4.6E-39 309.1 31.3 229 310-580 147-392 (392)
32 cd04955 GT1_like_6 This family 100.0 5.2E-33 1.1E-37 294.0 38.1 356 86-585 1-363 (363)
33 PRK09922 UDP-D-galactose:(gluc 100.0 8.3E-34 1.8E-38 301.7 30.6 347 85-588 1-357 (359)
34 cd05844 GT1_like_7 Glycosyltra 100.0 6.5E-33 1.4E-37 294.4 34.7 273 228-583 82-367 (367)
35 cd03819 GT1_WavL_like This fam 100.0 8.5E-33 1.8E-37 291.7 34.9 338 99-576 8-355 (355)
36 cd03825 GT1_wcfI_like This fam 100.0 9.1E-33 2E-37 292.2 35.1 351 85-587 1-365 (365)
37 cd03807 GT1_WbnK_like This fam 100.0 7.1E-33 1.5E-37 290.2 33.7 357 86-585 1-365 (365)
38 cd03814 GT1_like_2 This family 100.0 1.5E-32 3.3E-37 288.9 35.9 360 86-585 1-364 (364)
39 cd04951 GT1_WbdM_like This fam 100.0 1.1E-32 2.4E-37 290.9 34.9 353 86-585 1-359 (360)
40 cd03795 GT1_like_4 This family 100.0 4E-32 8.7E-37 286.3 35.5 349 86-577 1-357 (357)
41 PRK15179 Vi polysaccharide bio 100.0 2.8E-32 6E-37 306.7 36.1 283 228-585 400-692 (694)
42 cd03823 GT1_ExpE7_like This fa 100.0 4.3E-32 9.4E-37 284.6 34.9 357 86-585 1-358 (359)
43 cd03821 GT1_Bme6_like This fam 100.0 3.3E-32 7.1E-37 286.3 33.3 367 86-582 1-375 (375)
44 cd03812 GT1_CapH_like This fam 100.0 3.4E-32 7.3E-37 287.5 32.4 348 86-576 1-352 (358)
45 cd03799 GT1_amsK_like This is 100.0 1.1E-31 2.4E-36 282.7 35.5 341 86-579 1-354 (355)
46 cd03813 GT1_like_3 This family 100.0 9.4E-33 2E-37 304.1 27.9 286 228-585 173-475 (475)
47 cd03794 GT1_wbuB_like This fam 100.0 1E-31 2.2E-36 283.7 34.5 382 86-581 1-394 (394)
48 cd03801 GT1_YqgM_like This fam 100.0 3.1E-31 6.7E-36 276.8 36.8 367 86-585 1-374 (374)
49 cd03817 GT1_UGDG_like This fam 100.0 2.6E-31 5.6E-36 279.7 35.9 365 86-586 1-373 (374)
50 PRK15490 Vi polysaccharide bio 100.0 1.9E-31 4E-36 287.4 33.2 278 228-586 280-575 (578)
51 cd03822 GT1_ecORF704_like This 100.0 2.8E-31 6.1E-36 279.8 32.7 351 86-585 1-366 (366)
52 PLN02949 transferase, transfer 100.0 1.1E-30 2.3E-35 284.4 37.3 229 312-591 215-461 (463)
53 cd03809 GT1_mtfB_like This fam 100.0 1.6E-31 3.5E-36 281.5 29.8 360 86-582 1-365 (365)
54 cd03798 GT1_wlbH_like This fam 100.0 2.1E-30 4.5E-35 271.7 35.6 372 87-587 1-377 (377)
55 cd03816 GT1_ALG1_like This fam 100.0 1.7E-30 3.8E-35 281.3 35.9 370 85-576 4-406 (415)
56 cd03808 GT1_cap1E_like This fa 100.0 1.6E-30 3.5E-35 271.3 33.7 351 86-581 1-358 (359)
57 cd03806 GT1_ALG11_like This fa 100.0 1.1E-30 2.4E-35 282.9 33.5 218 310-578 182-418 (419)
58 PF08323 Glyco_transf_5: Starc 100.0 2.3E-32 5E-37 274.0 18.6 234 86-346 1-243 (245)
59 cd03820 GT1_amsD_like This fam 100.0 1.1E-30 2.4E-35 271.4 31.8 340 86-582 1-348 (348)
60 cd03793 GT1_Glycogen_synthase_ 100.0 9.9E-30 2.2E-34 274.1 33.1 447 90-589 7-589 (590)
61 TIGR03087 stp1 sugar transfera 100.0 6.5E-30 1.4E-34 275.5 24.7 222 309-585 164-395 (397)
62 PLN02501 digalactosyldiacylgly 100.0 7.1E-29 1.5E-33 269.6 28.7 207 318-584 499-707 (794)
63 cd03811 GT1_WabH_like This fam 100.0 3.4E-28 7.3E-33 252.9 30.8 334 86-565 1-342 (353)
64 cd03804 GT1_wbaZ_like This fam 100.0 1.5E-28 3.3E-33 260.0 28.0 206 309-580 145-350 (351)
65 PHA01633 putative glycosyl tra 100.0 1.7E-27 3.6E-32 246.9 32.6 225 309-582 84-335 (335)
66 TIGR02918 accessory Sec system 100.0 2.1E-28 4.6E-33 268.9 27.4 224 314-587 267-500 (500)
67 PHA01630 putative group 1 glyc 100.0 4.6E-28 9.9E-33 253.5 25.5 231 309-586 85-330 (331)
68 cd04946 GT1_AmsK_like This fam 100.0 3E-27 6.5E-32 255.4 29.6 220 309-581 175-406 (407)
69 PLN02275 transferase, transfer 100.0 9.5E-27 2.1E-31 248.6 31.3 245 228-551 100-371 (371)
70 cd04949 GT1_gtfA_like This fam 99.9 3E-26 6.5E-31 244.3 23.6 215 311-580 151-372 (372)
71 cd03788 GT1_TPS Trehalose-6-Ph 99.9 1.2E-25 2.7E-30 245.8 25.7 291 229-583 131-458 (460)
72 TIGR02400 trehalose_OtsA alpha 99.9 8.7E-25 1.9E-29 237.5 29.4 293 228-584 126-454 (456)
73 PRK00726 murG undecaprenyldiph 99.9 7.4E-24 1.6E-28 225.0 32.0 342 85-585 2-356 (357)
74 TIGR01133 murG undecaprenyldip 99.9 4.7E-23 1E-27 217.7 30.8 322 85-566 1-332 (348)
75 cd03785 GT1_MurG MurG is an N- 99.9 1.5E-22 3.3E-27 214.0 32.0 324 86-567 1-336 (350)
76 PRK13609 diacylglycerol glucos 99.9 1.6E-21 3.5E-26 209.0 32.6 220 315-586 145-371 (380)
77 PLN03063 alpha,alpha-trehalose 99.9 3.6E-22 7.8E-27 229.8 28.2 319 197-589 126-480 (797)
78 PRK14501 putative bifunctional 99.9 5.3E-22 1.1E-26 228.6 23.2 297 228-589 132-465 (726)
79 cd04950 GT1_like_1 Glycosyltra 99.9 1.1E-20 2.5E-25 201.9 30.4 222 309-586 145-371 (373)
80 PRK05749 3-deoxy-D-manno-octul 99.9 5.5E-21 1.2E-25 208.0 27.2 233 309-588 170-421 (425)
81 PLN02605 monogalactosyldiacylg 99.9 2.2E-20 4.7E-25 200.4 29.6 216 315-583 148-378 (382)
82 PF00534 Glycos_transf_1: Glyc 99.9 4.2E-21 9.2E-26 181.9 19.6 164 388-567 2-170 (172)
83 KOG0853 Glycosyltransferase [C 99.9 1.8E-20 3.9E-25 198.9 25.9 242 314-590 206-471 (495)
84 PRK13608 diacylglycerol glucos 99.9 5.8E-20 1.2E-24 197.6 27.8 222 316-589 146-374 (391)
85 cd01635 Glycosyltransferase_GT 99.9 1.5E-19 3.2E-24 177.2 23.9 118 408-525 109-229 (229)
86 TIGR02398 gluc_glyc_Psyn gluco 99.8 7E-19 1.5E-23 190.5 28.7 292 228-582 131-478 (487)
87 PRK00025 lpxB lipid-A-disaccha 99.8 2.6E-17 5.6E-22 176.3 26.5 218 314-588 131-375 (380)
88 cd03786 GT1_UDP-GlcNAc_2-Epime 99.8 8.2E-17 1.8E-21 171.2 29.1 215 315-583 139-361 (363)
89 PRK09814 beta-1,6-galactofuran 99.8 2.1E-16 4.6E-21 166.3 30.4 185 308-566 114-309 (333)
90 PF05693 Glycogen_syn: Glycoge 99.8 8.7E-17 1.9E-21 173.0 27.3 442 90-589 2-584 (633)
91 TIGR00236 wecB UDP-N-acetylglu 99.8 8.5E-17 1.8E-21 171.5 24.5 199 317-566 141-345 (365)
92 PLN03064 alpha,alpha-trehalose 99.8 1.8E-16 4E-21 181.9 27.9 298 228-588 230-563 (934)
93 COG0438 RfaG Glycosyltransfera 99.7 1.2E-15 2.7E-20 157.1 25.1 223 317-589 150-379 (381)
94 KOG1387 Glycosyltransferase [C 99.7 2.1E-15 4.5E-20 150.1 23.8 223 315-589 220-461 (465)
95 KOG2941 Beta-1,4-mannosyltrans 99.6 2.1E-13 4.6E-18 136.0 27.0 300 228-579 103-434 (444)
96 TIGR00215 lpxB lipid-A-disacch 99.6 6.8E-13 1.5E-17 142.3 26.7 191 312-553 133-347 (385)
97 PF13692 Glyco_trans_1_4: Glyc 99.6 8.5E-15 1.8E-19 132.8 9.7 130 403-553 2-135 (135)
98 PF00982 Glyco_transf_20: Glyc 99.5 7E-12 1.5E-16 136.5 26.2 315 198-584 121-472 (474)
99 PRK10117 trehalose-6-phosphate 99.5 1.2E-11 2.5E-16 133.2 26.1 297 228-588 122-455 (474)
100 TIGR03713 acc_sec_asp1 accesso 99.5 2.3E-12 5E-17 142.2 20.6 162 404-584 320-519 (519)
101 PF13439 Glyco_transf_4: Glyco 99.4 1E-12 2.2E-17 123.7 12.1 176 87-363 1-176 (177)
102 PF13579 Glyco_trans_4_4: Glyc 99.4 1.9E-12 4E-17 119.8 9.2 160 101-357 1-160 (160)
103 COG0058 GlgP Glucan phosphoryl 99.3 4.3E-11 9.3E-16 133.1 19.0 415 96-529 111-632 (750)
104 PLN02205 alpha,alpha-trehalose 99.3 5.4E-10 1.2E-14 129.6 27.3 296 230-587 203-552 (854)
105 COG0380 OtsA Trehalose-6-phosp 99.3 1.6E-09 3.4E-14 116.4 28.7 316 197-585 126-478 (486)
106 PRK12446 undecaprenyldiphospho 99.2 2E-08 4.3E-13 106.5 30.4 167 389-585 173-350 (352)
107 PRK14986 glycogen phosphorylas 99.2 2E-09 4.3E-14 121.4 22.6 295 229-526 313-694 (815)
108 COG0707 MurG UDP-N-acetylgluco 99.1 1.2E-07 2.7E-12 99.8 32.0 342 85-587 1-354 (357)
109 PF13524 Glyco_trans_1_2: Glyc 99.1 2.1E-10 4.5E-15 97.0 9.0 89 480-582 1-92 (92)
110 cd04300 GT1_Glycogen_Phosphory 99.0 2.3E-08 5E-13 113.1 23.0 290 228-526 300-681 (797)
111 PRK14985 maltodextrin phosphor 99.0 1.1E-08 2.4E-13 115.1 20.0 294 228-526 302-680 (798)
112 TIGR02919 accessory Sec system 99.0 9.7E-09 2.1E-13 111.1 18.0 171 316-553 238-411 (438)
113 TIGR02093 P_ylase glycogen/sta 99.0 3.8E-08 8.2E-13 111.0 20.2 292 228-526 297-678 (794)
114 KOG3742 Glycogen synthase [Car 98.9 2.1E-09 4.6E-14 110.5 6.0 320 229-588 174-614 (692)
115 PF00343 Phosphorylase: Carboh 98.8 4.1E-07 8.9E-12 101.7 21.9 293 230-526 215-595 (713)
116 PF09314 DUF1972: Domain of un 98.8 2.1E-07 4.5E-12 88.3 16.0 181 86-359 3-185 (185)
117 TIGR03568 NeuC_NnaA UDP-N-acet 98.7 7.1E-06 1.5E-10 87.5 25.1 214 316-583 143-364 (365)
118 PF04007 DUF354: Protein of un 98.7 5.5E-06 1.2E-10 86.5 23.4 296 85-553 1-310 (335)
119 PF13528 Glyco_trans_1_3: Glyc 98.6 4.9E-06 1.1E-10 86.8 20.5 119 402-550 192-317 (318)
120 cd03784 GT1_Gtf_like This fami 98.6 2.9E-05 6.4E-10 83.8 26.2 124 402-553 239-372 (401)
121 PF02350 Epimerase_2: UDP-N-ac 98.5 3.1E-05 6.7E-10 81.9 23.3 269 228-585 67-346 (346)
122 COG0763 LpxB Lipid A disacchar 98.4 3.1E-05 6.7E-10 80.5 21.4 193 312-554 131-345 (381)
123 PF13477 Glyco_trans_4_2: Glyc 98.4 3.5E-06 7.5E-11 76.6 12.7 138 86-325 1-139 (139)
124 TIGR03590 PseG pseudaminic aci 98.4 3.3E-05 7.2E-10 79.2 21.3 96 404-509 172-268 (279)
125 TIGR03492 conserved hypothetic 98.4 0.00018 3.8E-09 77.7 27.7 188 315-564 158-373 (396)
126 COG0381 WecB UDP-N-acetylgluco 98.3 0.0025 5.4E-08 66.7 32.0 222 317-588 145-372 (383)
127 PF02684 LpxB: Lipid-A-disacch 98.2 0.00065 1.4E-08 72.0 25.0 192 311-553 127-340 (373)
128 COG1519 KdtA 3-deoxy-D-manno-o 98.1 0.00081 1.8E-08 70.9 23.5 229 307-585 167-416 (419)
129 PRK01021 lpxB lipid-A-disaccha 98.1 0.001 2.2E-08 73.8 25.5 153 312-508 356-514 (608)
130 PHA03392 egt ecdysteroid UDP-g 98.0 0.0051 1.1E-07 68.5 29.7 124 404-553 298-432 (507)
131 COG1817 Uncharacterized protei 98.0 0.00066 1.4E-08 68.4 19.7 182 315-553 124-314 (346)
132 PF13844 Glyco_transf_41: Glyc 97.9 0.0005 1.1E-08 74.5 17.3 177 392-588 276-468 (468)
133 COG1819 Glycosyl transferases, 97.8 0.0019 4.1E-08 69.8 20.7 157 404-584 239-399 (406)
134 TIGR00661 MJ1255 conserved hyp 97.8 0.0026 5.6E-08 66.7 20.6 119 404-553 190-314 (321)
135 PRK02797 4-alpha-L-fucosyltran 97.5 0.038 8.3E-07 56.3 23.3 164 404-588 146-318 (322)
136 PF12000 Glyco_trans_4_3: Gkyc 97.3 0.0034 7.4E-08 59.0 11.7 131 194-363 39-170 (171)
137 COG3914 Spy Predicted O-linked 97.1 0.013 2.7E-07 63.9 15.7 179 392-590 421-617 (620)
138 TIGR01426 MGT glycosyltransfer 97.1 0.011 2.3E-07 63.8 15.0 157 404-583 227-389 (392)
139 PRK10017 colanic acid biosynth 97.1 0.66 1.4E-05 50.5 31.3 215 309-567 168-404 (426)
140 PF04464 Glyphos_transf: CDP-G 97.1 0.021 4.5E-07 61.0 16.9 193 310-553 127-336 (369)
141 COG4641 Uncharacterized protei 97.0 0.066 1.4E-06 55.8 19.2 187 350-588 162-363 (373)
142 PRK14089 ipid-A-disaccharide s 97.0 0.17 3.8E-06 53.4 22.7 91 404-508 169-261 (347)
143 PF07429 Glyco_transf_56: 4-al 96.8 0.5 1.1E-05 49.1 23.1 163 404-586 185-355 (360)
144 COG3660 Predicted nucleoside-d 96.8 0.2 4.4E-06 49.6 19.2 102 402-509 161-273 (329)
145 PF00862 Sucrose_synth: Sucros 96.7 0.0077 1.7E-07 64.8 9.7 81 228-330 401-481 (550)
146 KOG1050 Trehalose-6-phosphate 96.5 0.27 5.8E-06 56.6 20.8 261 229-554 141-441 (732)
147 COG4671 Predicted glycosyl tra 96.0 2.5 5.4E-05 44.0 25.0 136 403-553 220-365 (400)
148 PF11997 DUF3492: Domain of un 95.9 0.016 3.4E-07 59.0 6.3 45 85-130 1-45 (268)
149 PF06258 Mito_fiss_Elm1: Mitoc 95.1 0.48 1E-05 49.3 14.2 103 404-511 148-259 (311)
150 PF11440 AGT: DNA alpha-glucos 95.1 4.2 9.1E-05 40.9 19.6 152 390-553 169-353 (355)
151 PLN02670 transferase, transfer 93.2 2 4.2E-05 47.5 14.8 107 474-587 352-466 (472)
152 PF10087 DUF2325: Uncharacteri 93.2 0.21 4.5E-06 42.4 5.6 80 435-515 2-89 (97)
153 PLN02562 UDP-glycosyltransfera 93.1 1.4 3.1E-05 48.4 13.5 128 404-553 275-413 (448)
154 PLN02448 UDP-glycosyltransfera 93.0 2.2 4.8E-05 47.0 14.9 133 403-553 275-415 (459)
155 COG3980 spsG Spore coat polysa 92.3 14 0.0003 37.5 18.7 90 405-506 161-251 (318)
156 PRK10422 lipopolysaccharide co 91.8 8.2 0.00018 40.8 17.0 102 403-509 184-289 (352)
157 TIGR02195 heptsyl_trn_II lipop 91.4 2.1 4.5E-05 44.9 11.8 112 388-508 161-277 (334)
158 PF12038 DUF3524: Domain of un 91.2 0.99 2.1E-05 42.0 7.9 20 315-334 117-136 (168)
159 PF06925 MGDG_synth: Monogalac 91.0 1.3 2.8E-05 41.7 8.8 26 316-344 136-161 (169)
160 PLN02410 UDP-glucoronosyl/UDP- 90.7 4.4 9.5E-05 44.6 13.8 69 474-554 337-411 (451)
161 PF01075 Glyco_transf_9: Glyco 90.1 2.9 6.3E-05 41.6 11.0 101 403-508 106-209 (247)
162 TIGR02201 heptsyl_trn_III lipo 89.2 21 0.00045 37.5 17.2 101 404-509 183-287 (344)
163 PLN03004 UDP-glycosyltransfera 89.1 5.6 0.00012 43.7 13.0 137 403-553 271-424 (451)
164 TIGR02193 heptsyl_trn_I lipopo 89.0 11 0.00024 39.1 14.8 98 404-508 181-280 (319)
165 PLN03007 UDP-glucosyltransfera 88.8 7.5 0.00016 43.2 13.9 141 402-553 285-440 (482)
166 PF00201 UDPGT: UDP-glucoronos 88.7 1.8 4E-05 48.1 9.2 126 402-553 276-409 (500)
167 PLN00164 glucosyltransferase; 88.5 13 0.00028 41.2 15.6 74 474-553 352-431 (480)
168 cd03789 GT1_LPS_heptosyltransf 88.5 3.2 7E-05 42.2 10.2 102 405-513 124-229 (279)
169 PLN02210 UDP-glucosyl transfer 88.4 9.7 0.00021 41.9 14.4 138 403-553 270-415 (456)
170 PF08288 PIGA: PIGA (GPI ancho 88.3 2.5 5.4E-05 34.9 7.1 36 228-269 50-85 (90)
171 PF04101 Glyco_tran_28_C: Glyc 88.0 0.2 4.4E-06 46.8 0.9 80 471-564 66-153 (167)
172 PLN02173 UDP-glucosyl transfer 87.4 7.7 0.00017 42.6 12.7 137 404-553 266-408 (449)
173 PLN02863 UDP-glucoronosyl/UDP- 87.0 9.4 0.0002 42.3 13.3 134 403-552 284-432 (477)
174 PLN02208 glycosyltransferase f 87.0 17 0.00038 39.8 15.2 73 474-554 324-402 (442)
175 TIGR03609 S_layer_CsaB polysac 86.5 25 0.00053 36.1 15.5 100 404-508 173-276 (298)
176 PLN02167 UDP-glycosyltransfera 86.3 13 0.00027 41.3 13.8 75 474-553 353-434 (475)
177 COG0859 RfaF ADP-heptose:LPS h 86.2 16 0.00034 38.4 14.0 98 404-508 177-277 (334)
178 PLN02207 UDP-glycosyltransfera 85.2 22 0.00047 39.3 14.9 139 403-552 276-425 (468)
179 PLN02152 indole-3-acetate beta 84.9 17 0.00036 40.1 13.8 137 403-553 262-417 (455)
180 PLN02764 glycosyltransferase f 84.9 24 0.00052 38.8 14.9 72 474-553 330-407 (453)
181 PLN02554 UDP-glycosyltransfera 84.4 19 0.0004 40.0 14.1 76 474-552 355-439 (481)
182 PLN02992 coniferyl-alcohol glu 84.3 18 0.00038 40.2 13.7 71 474-553 351-427 (481)
183 PRK10916 ADP-heptose:LPS hepto 83.9 11 0.00024 39.7 11.7 110 391-508 170-287 (348)
184 PF05159 Capsule_synth: Capsul 83.2 5.5 0.00012 40.4 8.6 101 401-510 115-227 (269)
185 PF01975 SurE: Survival protei 81.8 1.6 3.6E-05 42.1 3.9 38 85-129 1-38 (196)
186 PLN00414 glycosyltransferase f 81.8 28 0.00061 38.2 14.0 72 474-553 325-402 (446)
187 PLN02555 limonoid glucosyltran 81.7 16 0.00036 40.4 12.2 74 474-553 350-429 (480)
188 PF02951 GSH-S_N: Prokaryotic 78.7 2.8 6.1E-05 37.0 4.0 40 85-127 1-40 (119)
189 PRK10964 ADP-heptose:LPS hepto 78.6 16 0.00035 38.0 10.5 99 405-510 181-281 (322)
190 KOG0780 Signal recognition par 77.8 70 0.0015 34.1 14.3 169 405-585 156-341 (483)
191 PF01113 DapB_N: Dihydrodipico 76.7 5.1 0.00011 35.6 5.2 45 470-514 60-104 (124)
192 PF15024 Glyco_transf_18: Glyc 74.3 24 0.00051 39.4 10.4 161 404-587 278-456 (559)
193 PF04413 Glycos_transf_N: 3-De 70.9 34 0.00073 32.7 9.6 40 308-356 140-179 (186)
194 COG2910 Putative NADH-flavin r 70.8 6.1 0.00013 37.5 4.3 33 85-127 1-33 (211)
195 PRK00207 sulfur transfer compl 70.6 7.7 0.00017 34.7 4.8 40 85-127 1-41 (128)
196 PF03033 Glyco_transf_28: Glyc 70.3 6.1 0.00013 35.2 4.2 22 106-127 14-35 (139)
197 PRK06249 2-dehydropantoate 2-r 65.8 8.2 0.00018 40.1 4.6 35 82-127 3-37 (313)
198 PF03016 Exostosin: Exostosin 64.3 22 0.00048 36.3 7.5 69 471-549 230-301 (302)
199 TIGR00696 wecB_tagA_cpsF bacte 63.3 38 0.00083 32.1 8.2 98 417-517 33-140 (177)
200 cd06533 Glyco_transf_WecG_TagA 63.0 56 0.0012 30.7 9.3 101 414-517 28-139 (171)
201 KOG1192 UDP-glucuronosyl and U 62.9 1.2E+02 0.0026 33.4 13.6 129 404-553 279-422 (496)
202 PF08660 Alg14: Oligosaccharid 59.3 1.3E+02 0.0028 28.2 11.0 36 228-265 92-127 (170)
203 PF03808 Glyco_tran_WecB: Glyc 58.9 60 0.0013 30.5 8.7 100 415-517 31-141 (172)
204 PF03358 FMN_red: NADPH-depend 56.5 19 0.00042 32.7 4.9 40 85-127 1-40 (152)
205 TIGR01915 npdG NADPH-dependent 56.0 14 0.0003 36.3 4.0 33 85-127 1-33 (219)
206 PLN03015 UDP-glucosyl transfer 55.6 2.6E+02 0.0056 31.0 14.2 72 474-552 348-425 (470)
207 PLN00016 RNA-binding protein; 55.2 16 0.00035 38.9 4.7 38 84-127 52-89 (378)
208 PRK09739 hypothetical protein; 55.1 24 0.00051 34.0 5.4 43 82-127 1-43 (199)
209 PRK10037 cell division protein 55.0 14 0.0003 37.0 3.9 35 85-125 1-37 (250)
210 PF06564 YhjQ: YhjQ protein; 54.4 18 0.00039 36.1 4.5 37 85-127 1-39 (243)
211 cd03146 GAT1_Peptidase_E Type 53.6 1.4E+02 0.003 29.0 10.6 106 406-511 3-124 (212)
212 PF02374 ArsA_ATPase: Anion-tr 53.5 14 0.00029 38.5 3.6 36 85-127 1-38 (305)
213 PRK13234 nifH nitrogenase redu 53.1 18 0.00038 37.4 4.4 37 82-125 1-39 (295)
214 PF02826 2-Hacid_dh_C: D-isome 51.5 57 0.0012 30.7 7.3 81 432-514 36-133 (178)
215 TIGR01007 eps_fam capsular exo 51.5 25 0.00055 33.7 5.0 40 83-126 15-54 (204)
216 PRK03692 putative UDP-N-acetyl 51.1 62 0.0013 32.4 7.8 98 417-517 90-197 (243)
217 PRK05866 short chain dehydroge 50.8 29 0.00064 35.5 5.7 39 79-127 35-73 (293)
218 PRK08305 spoVFB dipicolinate s 50.2 29 0.00063 33.5 5.0 37 83-127 4-42 (196)
219 COG4635 HemG Flavodoxin [Energ 49.7 23 0.0005 32.8 4.0 37 85-126 1-37 (175)
220 PLN02534 UDP-glycosyltransfera 49.7 4.1E+02 0.0089 29.6 15.4 78 473-552 356-443 (491)
221 COG0111 SerA Phosphoglycerate 49.2 56 0.0012 34.2 7.4 81 432-514 142-239 (324)
222 PLN02927 antheraxanthin epoxid 48.2 28 0.0006 40.2 5.3 33 82-125 79-111 (668)
223 PF12996 DUF3880: DUF based on 48.1 41 0.00088 27.2 4.9 44 313-367 14-57 (79)
224 PRK10360 DNA-binding transcrip 47.7 2.3E+02 0.0049 26.1 11.6 108 434-553 3-118 (196)
225 PRK13932 stationary phase surv 46.7 24 0.00052 35.6 4.0 39 83-129 4-42 (257)
226 KOG2099 Glycogen phosphorylase 46.3 16 0.00035 40.4 2.8 138 390-527 550-715 (843)
227 cd00027 BRCT Breast Cancer Sup 45.6 56 0.0012 24.3 5.3 64 433-508 2-65 (72)
228 COG1763 MobB Molybdopterin-gua 45.5 33 0.00071 32.0 4.4 41 84-129 1-41 (161)
229 PRK13849 putative crown gall t 45.4 27 0.00058 34.7 4.2 37 85-127 1-39 (231)
230 PRK07236 hypothetical protein; 44.8 21 0.00046 38.1 3.6 35 81-126 3-37 (386)
231 PRK05708 2-dehydropantoate 2-r 44.7 27 0.00059 36.1 4.3 33 84-127 2-34 (305)
232 COG0300 DltE Short-chain dehyd 44.6 33 0.00071 34.8 4.6 27 100-129 15-41 (265)
233 PLN02572 UDP-sulfoquinovose sy 44.5 32 0.0007 37.7 5.0 33 83-125 46-78 (442)
234 COG0569 TrkA K+ transport syst 44.4 23 0.00051 34.9 3.6 26 102-127 7-32 (225)
235 PF09949 DUF2183: Uncharacteri 44.3 67 0.0015 27.4 5.8 43 419-463 53-95 (100)
236 PRK08410 2-hydroxyacid dehydro 43.8 64 0.0014 33.5 6.9 45 470-514 189-238 (311)
237 PRK12827 short chain dehydroge 42.9 32 0.0007 33.6 4.4 35 82-126 4-38 (249)
238 PRK12825 fabG 3-ketoacyl-(acyl 42.9 33 0.00072 33.4 4.5 36 82-127 4-39 (249)
239 TIGR00087 surE 5'/3'-nucleotid 41.8 30 0.00065 34.6 3.9 37 85-129 1-37 (244)
240 PRK12921 2-dehydropantoate 2-r 41.6 29 0.00063 35.6 3.9 31 85-126 1-31 (305)
241 TIGR01380 glut_syn glutathione 41.5 25 0.00054 36.6 3.4 40 85-127 1-40 (312)
242 PRK14619 NAD(P)H-dependent gly 41.2 36 0.00079 35.2 4.6 34 83-127 3-36 (308)
243 PRK06932 glycerate dehydrogena 40.6 74 0.0016 33.1 6.7 44 471-514 191-239 (314)
244 PF01081 Aldolase: KDPG and KH 40.3 1.8E+02 0.0038 28.2 8.7 69 419-487 20-90 (196)
245 PRK06015 keto-hydroxyglutarate 40.2 2.4E+02 0.0051 27.4 9.6 89 417-505 14-121 (201)
246 PRK00048 dihydrodipicolinate r 39.8 80 0.0017 31.8 6.7 42 471-512 54-95 (257)
247 PRK05718 keto-hydroxyglutarate 39.8 2.4E+02 0.0051 27.6 9.7 87 416-505 24-112 (212)
248 PRK05993 short chain dehydroge 39.6 41 0.00089 33.9 4.6 35 84-127 3-37 (277)
249 KOG4626 O-linked N-acetylgluco 39.6 1.7E+02 0.0037 33.3 9.2 181 391-590 749-944 (966)
250 PRK13869 plasmid-partitioning 39.5 34 0.00073 37.1 4.1 37 83-125 119-157 (405)
251 PRK10840 transcriptional regul 39.4 3.4E+02 0.0075 25.8 12.6 110 432-553 3-126 (216)
252 TIGR03371 cellulose_yhjQ cellu 39.0 42 0.00092 33.0 4.5 37 85-127 1-39 (246)
253 cd02040 NifH NifH gene encodes 38.9 43 0.00093 33.6 4.6 25 102-126 13-37 (270)
254 PRK09271 flavodoxin; Provision 38.8 50 0.0011 30.5 4.7 36 85-125 1-36 (160)
255 cd03129 GAT1_Peptidase_E_like 38.8 3.6E+02 0.0079 25.9 11.8 100 414-513 11-126 (210)
256 TIGR03453 partition_RepA plasm 38.5 38 0.00081 36.4 4.3 38 83-126 102-141 (387)
257 PF00551 Formyl_trans_N: Formy 38.5 99 0.0021 29.2 6.7 34 85-127 1-36 (181)
258 PRK13397 3-deoxy-7-phosphohept 38.4 4.3E+02 0.0093 26.6 12.3 91 417-509 27-130 (250)
259 PRK06732 phosphopantothenate-- 38.4 39 0.00085 33.4 4.1 26 99-127 24-49 (229)
260 PRK13396 3-deoxy-7-phosphohept 38.1 5.2E+02 0.011 27.4 14.0 104 403-509 100-216 (352)
261 PRK05653 fabG 3-ketoacyl-(acyl 37.9 43 0.00094 32.5 4.4 35 83-127 4-38 (246)
262 COG1553 DsrE Uncharacterized c 37.7 65 0.0014 28.6 4.7 40 85-127 1-41 (126)
263 KOG1021 Acetylglucosaminyltran 37.7 2.5E+02 0.0054 31.0 10.6 84 470-566 336-422 (464)
264 PRK13398 3-deoxy-7-phosphohept 37.5 4.5E+02 0.0098 26.6 14.2 102 405-509 28-142 (266)
265 TIGR01425 SRP54_euk signal rec 37.3 5.9E+02 0.013 27.9 14.3 99 478-585 241-341 (429)
266 PRK07454 short chain dehydroge 37.2 48 0.001 32.4 4.6 36 83-127 4-39 (241)
267 COG1192 Soj ATPases involved i 37.2 43 0.00093 33.5 4.3 37 84-126 1-40 (259)
268 PRK06522 2-dehydropantoate 2-r 37.2 39 0.00086 34.5 4.1 32 85-127 1-32 (304)
269 TIGR01182 eda Entner-Doudoroff 37.2 2.9E+02 0.0063 26.8 9.7 70 417-486 18-89 (204)
270 COG0496 SurE Predicted acid ph 37.1 37 0.0008 34.1 3.6 37 85-129 1-37 (252)
271 PF03446 NAD_binding_2: NAD bi 36.4 45 0.00098 30.9 4.0 30 85-125 2-31 (163)
272 PRK06180 short chain dehydroge 35.9 50 0.0011 33.2 4.6 25 100-127 13-37 (277)
273 PF10727 Rossmann-like: Rossma 35.8 24 0.00051 31.6 1.8 35 82-127 8-42 (127)
274 PRK06487 glycerate dehydrogena 35.6 82 0.0018 32.8 6.2 44 471-514 191-239 (317)
275 PF09140 MipZ: ATPase MipZ; I 35.0 43 0.00094 33.6 3.7 35 87-127 2-38 (261)
276 PF04230 PS_pyruv_trans: Polys 35.0 4.3E+02 0.0093 25.6 12.5 90 415-509 189-284 (286)
277 PRK13933 stationary phase surv 34.8 43 0.00094 33.7 3.7 37 85-129 1-37 (253)
278 PRK05693 short chain dehydroge 34.8 49 0.0011 33.2 4.3 34 85-127 1-34 (274)
279 PRK13935 stationary phase surv 34.6 44 0.00095 33.7 3.7 38 85-130 1-38 (253)
280 COG1052 LdhA Lactate dehydroge 34.5 1.1E+02 0.0024 32.0 6.9 44 471-514 194-242 (324)
281 PRK06179 short chain dehydroge 34.4 57 0.0012 32.6 4.7 25 100-127 13-37 (270)
282 PRK06924 short chain dehydroge 34.0 51 0.0011 32.4 4.2 34 85-127 1-34 (251)
283 PF02525 Flavodoxin_2: Flavodo 33.9 57 0.0012 31.2 4.4 38 85-125 1-40 (199)
284 COG0003 ArsA Predicted ATPase 33.6 56 0.0012 34.2 4.4 75 84-178 1-78 (322)
285 PLN02695 GDP-D-mannose-3',5'-e 33.5 51 0.0011 35.1 4.3 35 83-127 20-54 (370)
286 PLN00141 Tic62-NAD(P)-related 33.4 53 0.0012 32.5 4.2 35 83-127 16-50 (251)
287 PF00201 UDPGT: UDP-glucoronos 33.0 16 0.00034 40.6 0.3 27 102-128 11-37 (500)
288 PRK07308 flavodoxin; Validated 32.9 63 0.0014 29.2 4.3 26 100-125 12-37 (146)
289 PF02441 Flavoprotein: Flavopr 32.7 61 0.0013 28.7 4.1 36 85-127 1-36 (129)
290 PRK06756 flavodoxin; Provision 32.7 71 0.0015 28.9 4.6 37 85-126 2-38 (148)
291 CHL00194 ycf39 Ycf39; Provisio 32.7 49 0.0011 34.2 4.0 33 85-127 1-33 (317)
292 PRK13185 chlL protochlorophyll 32.5 51 0.0011 33.2 4.0 25 102-126 14-38 (270)
293 PRK05246 glutathione synthetas 32.4 41 0.00088 35.0 3.3 40 85-127 2-41 (316)
294 CHL00072 chlL photochlorophyll 32.2 60 0.0013 33.4 4.4 34 85-126 1-36 (290)
295 TIGR00715 precor6x_red precorr 32.1 61 0.0013 32.7 4.3 121 404-551 131-255 (256)
296 CHL00200 trpA tryptophan synth 32.0 5.5E+02 0.012 26.0 13.7 121 402-528 91-233 (263)
297 PLN02657 3,8-divinyl protochlo 31.9 75 0.0016 34.1 5.3 36 82-127 58-93 (390)
298 CHL00175 minD septum-site dete 31.8 83 0.0018 31.9 5.4 41 79-125 9-51 (281)
299 PRK07364 2-octaprenyl-6-methox 31.8 53 0.0011 35.3 4.2 42 75-127 9-50 (415)
300 PRK13232 nifH nitrogenase redu 31.8 48 0.001 33.5 3.6 26 100-125 9-36 (273)
301 PRK14494 putative molybdopteri 31.8 73 0.0016 31.6 4.7 38 85-127 1-38 (229)
302 PLN02928 oxidoreductase family 31.7 1E+02 0.0022 32.6 6.2 45 470-514 219-268 (347)
303 PRK00346 surE 5'(3')-nucleotid 31.6 54 0.0012 33.0 3.8 37 85-129 1-37 (250)
304 cd01425 RPS2 Ribosomal protein 31.6 2.5E+02 0.0055 26.8 8.4 40 476-516 126-166 (193)
305 PRK08229 2-dehydropantoate 2-r 31.2 56 0.0012 34.2 4.1 33 84-127 2-34 (341)
306 TIGR02069 cyanophycinase cyano 31.1 5.5E+02 0.012 25.7 11.1 96 417-512 12-127 (250)
307 PRK15409 bifunctional glyoxyla 31.0 1.3E+02 0.0028 31.5 6.7 44 471-514 194-242 (323)
308 PF02635 DrsE: DsrE/DsrF-like 30.9 1E+02 0.0023 26.2 5.2 40 85-127 1-43 (122)
309 PRK06753 hypothetical protein; 30.5 44 0.00095 35.3 3.2 31 85-126 1-31 (373)
310 PRK10675 UDP-galactose-4-epime 30.5 57 0.0012 33.8 4.1 32 85-126 1-32 (338)
311 PRK13235 nifH nitrogenase redu 30.4 57 0.0012 33.0 3.9 26 100-125 9-36 (274)
312 TIGR01968 minD_bact septum sit 30.3 59 0.0013 32.2 4.0 24 102-125 14-37 (261)
313 PRK13934 stationary phase surv 30.3 57 0.0012 33.1 3.7 37 85-129 1-37 (266)
314 PLN02240 UDP-glucose 4-epimera 30.2 66 0.0014 33.6 4.5 34 82-125 3-36 (352)
315 PRK07577 short chain dehydroge 30.1 73 0.0016 30.8 4.5 35 83-127 2-36 (234)
316 PRK10538 malonic semialdehyde 29.9 66 0.0014 31.7 4.2 33 85-127 1-33 (248)
317 TIGR03012 sulf_tusD_dsrE sulfu 29.7 90 0.002 27.8 4.6 39 86-127 1-40 (127)
318 PRK09730 putative NAD(P)-bindi 29.6 67 0.0015 31.3 4.2 34 85-127 1-34 (247)
319 PRK05920 aromatic acid decarbo 29.5 94 0.002 30.2 5.0 36 84-127 3-39 (204)
320 PRK06101 short chain dehydroge 29.4 70 0.0015 31.3 4.3 34 85-127 1-34 (240)
321 PHA02519 plasmid partition pro 29.3 65 0.0014 34.7 4.2 37 83-125 104-142 (387)
322 KOG1209 1-Acyl dihydroxyaceton 28.8 82 0.0018 30.9 4.3 35 84-127 7-41 (289)
323 TIGR00639 PurN phosphoribosylg 28.6 1.9E+02 0.004 27.8 6.8 34 85-127 1-36 (190)
324 PRK08163 salicylate hydroxylas 28.5 56 0.0012 34.8 3.6 33 83-126 3-35 (396)
325 PRK08703 short chain dehydroge 28.4 85 0.0018 30.6 4.7 25 100-127 15-39 (239)
326 PF04392 ABC_sub_bind: ABC tra 28.3 6.4E+02 0.014 25.5 12.9 99 417-520 116-226 (294)
327 PRK07806 short chain dehydroge 28.3 83 0.0018 30.8 4.6 34 83-126 5-38 (248)
328 PRK11064 wecC UDP-N-acetyl-D-m 28.3 63 0.0014 35.1 4.0 35 82-127 1-35 (415)
329 PRK14618 NAD(P)H-dependent gly 28.2 69 0.0015 33.4 4.2 33 84-127 4-36 (328)
330 COG0052 RpsB Ribosomal protein 28.2 6.3E+02 0.014 25.4 10.7 156 355-516 15-195 (252)
331 PRK07023 short chain dehydroge 28.1 77 0.0017 31.0 4.3 33 85-127 2-34 (243)
332 PRK08177 short chain dehydroge 28.1 77 0.0017 30.6 4.3 34 85-127 1-34 (225)
333 PF07015 VirC1: VirC1 protein; 28.1 90 0.0019 31.0 4.6 26 102-127 14-39 (231)
334 PRK01372 ddl D-alanine--D-alan 28.0 86 0.0019 32.1 4.8 44 82-127 2-45 (304)
335 COG2084 MmsB 3-hydroxyisobutyr 27.7 61 0.0013 33.3 3.5 32 85-127 1-32 (286)
336 PRK13230 nitrogenase reductase 27.5 71 0.0015 32.4 4.0 26 100-125 9-36 (279)
337 TIGR02622 CDP_4_6_dhtase CDP-g 27.4 76 0.0017 33.2 4.4 34 83-126 3-36 (349)
338 PF00185 OTCace: Aspartate/orn 27.3 71 0.0015 29.6 3.6 37 83-128 1-37 (158)
339 TIGR01754 flav_RNR ribonucleot 27.2 90 0.002 28.0 4.2 34 85-123 1-34 (140)
340 PRK08105 flavodoxin; Provision 27.2 89 0.0019 28.6 4.2 27 100-126 12-38 (149)
341 PF00389 2-Hacid_dh: D-isomer 27.0 4.3E+02 0.0093 23.1 8.8 80 459-547 20-101 (133)
342 PRK12746 short chain dehydroge 26.9 85 0.0018 30.8 4.4 25 100-127 15-39 (254)
343 TIGR03029 EpsG chain length de 26.9 1.1E+02 0.0024 30.8 5.3 39 84-126 102-140 (274)
344 PF03721 UDPG_MGDP_dh_N: UDP-g 26.9 82 0.0018 30.0 4.0 31 85-126 1-31 (185)
345 PRK15438 erythronate-4-phospha 26.8 2.6E+02 0.0055 30.1 8.1 82 431-514 115-213 (378)
346 PRK04020 rps2P 30S ribosomal p 26.8 5.8E+02 0.013 24.8 9.8 99 415-516 49-153 (204)
347 PRK06182 short chain dehydroge 26.7 88 0.0019 31.3 4.6 25 100-127 12-36 (273)
348 PRK08340 glucose-1-dehydrogena 26.4 81 0.0017 31.3 4.2 33 85-127 1-33 (259)
349 PRK09004 FMN-binding protein M 26.4 95 0.0021 28.3 4.2 27 99-125 11-37 (146)
350 PF09198 T4-Gluco-transf: Bact 26.3 1.9E+02 0.0042 19.3 4.3 36 85-122 1-38 (38)
351 PRK05884 short chain dehydroge 26.1 91 0.002 30.3 4.4 33 85-127 1-33 (223)
352 PRK05557 fabG 3-ketoacyl-(acyl 26.1 92 0.002 30.2 4.5 35 83-127 4-38 (248)
353 PRK05647 purN phosphoribosylgl 26.1 1.8E+02 0.0038 28.2 6.2 34 85-127 2-37 (200)
354 PRK12826 3-ketoacyl-(acyl-carr 26.0 90 0.002 30.4 4.4 34 84-127 6-39 (251)
355 TIGR00036 dapB dihydrodipicoli 26.0 1.8E+02 0.004 29.3 6.7 36 476-511 67-102 (266)
356 PLN02208 glycosyltransferase f 26.0 96 0.0021 34.0 4.9 39 83-127 3-41 (442)
357 COG4088 Predicted nucleotide k 25.9 58 0.0013 31.8 2.7 39 85-128 1-39 (261)
358 cd02032 Bchl_like This family 25.9 91 0.002 31.3 4.5 34 85-126 1-36 (267)
359 PF12683 DUF3798: Protein of u 25.9 4E+02 0.0087 27.1 8.6 111 389-506 23-135 (275)
360 PRK07679 pyrroline-5-carboxyla 25.7 80 0.0017 32.1 4.0 33 82-125 1-37 (279)
361 cd01080 NAD_bind_m-THF_DH_Cycl 25.6 4.1E+02 0.0089 24.8 8.4 66 419-487 29-97 (168)
362 PRK09620 hypothetical protein; 25.5 1.1E+02 0.0023 30.4 4.7 20 108-127 33-52 (229)
363 PRK13671 hypothetical protein; 25.5 2.4E+02 0.0053 29.1 7.4 136 405-576 2-140 (298)
364 PRK00211 sulfur relay protein 25.5 1.2E+02 0.0025 26.8 4.4 40 85-127 2-41 (119)
365 PLN02306 hydroxypyruvate reduc 25.4 1.6E+02 0.0035 31.6 6.4 45 470-514 229-278 (386)
366 COG4007 Predicted dehydrogenas 25.4 45 0.00097 33.5 1.9 33 100-137 31-64 (340)
367 PLN02166 dTDP-glucose 4,6-dehy 25.3 83 0.0018 34.4 4.3 35 82-126 118-152 (436)
368 PRK07102 short chain dehydroge 25.3 90 0.002 30.5 4.2 25 100-127 10-34 (243)
369 PLN00198 anthocyanidin reducta 25.3 92 0.002 32.4 4.5 36 82-127 7-42 (338)
370 PF11071 DUF2872: Protein of u 25.3 1.9E+02 0.0041 25.9 5.5 68 473-551 68-140 (141)
371 COG1090 Predicted nucleoside-d 25.2 55 0.0012 33.3 2.5 30 100-129 4-33 (297)
372 PRK06849 hypothetical protein; 25.2 89 0.0019 33.4 4.5 35 83-127 3-37 (389)
373 COG1922 WecG Teichoic acid bio 25.2 3.3E+02 0.0072 27.4 8.0 99 415-517 91-201 (253)
374 COG0716 FldA Flavodoxins [Ener 25.2 94 0.002 28.3 4.0 36 85-125 2-37 (151)
375 PRK13982 bifunctional SbtC-lik 25.1 1.8E+02 0.004 32.1 6.8 38 82-127 68-106 (475)
376 TIGR00959 ffh signal recogniti 25.1 9.2E+02 0.02 26.3 13.5 83 490-585 255-341 (428)
377 COG0702 Predicted nucleoside-d 25.0 94 0.002 30.8 4.4 35 85-129 1-35 (275)
378 TIGR03646 YtoQ_fam YtoQ family 25.0 1.9E+02 0.0041 26.0 5.4 45 472-517 70-119 (144)
379 TIGR03219 salicylate_mono sali 25.0 60 0.0013 35.0 3.1 30 85-125 1-31 (414)
380 PRK11104 hemG protoporphyrinog 24.9 86 0.0019 29.6 3.8 36 85-126 1-36 (177)
381 PRK07231 fabG 3-ketoacyl-(acyl 24.9 99 0.0021 30.2 4.4 34 84-127 5-38 (251)
382 PF10649 DUF2478: Protein of u 24.9 1.3E+02 0.0028 28.1 4.7 38 473-510 89-132 (159)
383 PRK08265 short chain dehydroge 24.8 1E+02 0.0022 30.6 4.6 25 100-127 15-39 (261)
384 TIGR00670 asp_carb_tr aspartat 24.8 6.8E+02 0.015 25.9 10.6 85 391-486 141-225 (301)
385 PRK14620 NAD(P)H-dependent gly 24.8 87 0.0019 32.6 4.2 32 85-127 1-32 (326)
386 PRK13243 glyoxylate reductase; 24.7 2.6E+02 0.0055 29.4 7.7 44 471-514 198-246 (333)
387 TIGR01281 DPOR_bchL light-inde 24.5 1E+02 0.0022 31.0 4.5 33 85-125 1-35 (268)
388 PRK06953 short chain dehydroge 24.3 98 0.0021 29.8 4.2 34 85-127 1-34 (222)
389 PLN02253 xanthoxin dehydrogena 24.3 1.2E+02 0.0025 30.5 4.9 25 100-127 27-51 (280)
390 PRK12829 short chain dehydroge 24.3 1E+02 0.0022 30.4 4.4 35 82-126 9-43 (264)
391 PRK10427 putative PTS system f 24.2 1.3E+02 0.0029 26.2 4.5 39 85-128 3-43 (114)
392 PRK07538 hypothetical protein; 24.1 64 0.0014 34.8 3.1 31 85-126 1-31 (413)
393 COG0541 Ffh Signal recognition 24.1 9.7E+02 0.021 26.2 16.0 164 408-584 158-340 (451)
394 PRK12939 short chain dehydroge 24.0 1.1E+02 0.0024 29.8 4.6 36 82-127 5-40 (250)
395 COG2204 AtoC Response regulato 23.9 1E+03 0.022 26.4 13.9 107 434-553 6-122 (464)
396 PRK05583 ribosomal protein L7A 23.9 4.6E+02 0.01 22.4 7.9 77 417-498 21-98 (104)
397 PRK06719 precorrin-2 dehydroge 23.9 60 0.0013 30.1 2.4 35 82-127 11-45 (157)
398 PRK08267 short chain dehydroge 23.9 1E+02 0.0022 30.5 4.3 25 100-127 10-34 (260)
399 PRK14569 D-alanyl-alanine synt 23.7 1.2E+02 0.0027 31.0 5.0 43 82-126 1-43 (296)
400 COG1830 FbaB DhnA-type fructos 23.7 3.7E+02 0.008 27.2 8.0 122 404-553 115-259 (265)
401 PRK13705 plasmid-partitioning 23.6 1E+02 0.0022 33.1 4.5 35 84-124 105-141 (388)
402 TIGR00853 pts-lac PTS system, 23.5 2.5E+02 0.0054 23.5 5.9 73 435-509 7-83 (95)
403 PRK00094 gpsA NAD(P)H-dependen 23.5 95 0.002 32.1 4.2 32 85-127 2-33 (325)
404 COG2085 Predicted dinucleotide 23.5 84 0.0018 30.6 3.4 27 102-128 8-34 (211)
405 TIGR00041 DTMP_kinase thymidyl 23.4 1.3E+02 0.0027 28.4 4.7 38 83-126 2-39 (195)
406 PRK10569 NAD(P)H-dependent FMN 23.4 1.4E+02 0.0031 28.5 5.0 38 85-126 1-39 (191)
407 PRK06398 aldose dehydrogenase; 23.4 1.1E+02 0.0025 30.3 4.6 25 100-127 15-39 (258)
408 PRK06194 hypothetical protein; 23.4 1.1E+02 0.0024 30.8 4.5 24 100-126 15-38 (287)
409 PRK07890 short chain dehydroge 23.3 1.1E+02 0.0024 30.1 4.4 25 100-127 14-38 (258)
410 TIGR00872 gnd_rel 6-phosphoglu 23.2 96 0.0021 31.9 4.1 31 85-126 1-31 (298)
411 cd05565 PTS_IIB_lactose PTS_II 23.1 3.1E+02 0.0068 23.3 6.4 73 435-508 4-79 (99)
412 PRK04148 hypothetical protein; 22.9 1E+02 0.0023 27.8 3.6 30 84-125 17-46 (134)
413 TIGR03018 pepcterm_TyrKin exop 22.8 1.5E+02 0.0032 28.5 5.1 40 84-127 34-74 (207)
414 PRK06436 glycerate dehydrogena 22.8 2.4E+02 0.0052 29.2 6.9 44 471-514 167-215 (303)
415 PRK05723 flavodoxin; Provision 22.8 1.2E+02 0.0026 27.8 4.2 36 85-125 1-36 (151)
416 PLN02778 3,5-epimerase/4-reduc 22.7 1E+02 0.0022 31.7 4.1 32 83-124 8-39 (298)
417 PRK06057 short chain dehydroge 22.7 1.1E+02 0.0025 30.0 4.4 36 82-127 5-40 (255)
418 PRK14495 putative molybdopteri 22.6 1.2E+02 0.0026 33.1 4.7 38 85-127 1-38 (452)
419 COG2894 MinD Septum formation 22.6 86 0.0019 31.0 3.2 36 86-127 3-40 (272)
420 PF13614 AAA_31: AAA domain; P 22.6 1.4E+02 0.003 26.9 4.7 28 100-127 11-38 (157)
421 PF13263 PHP_C: PHP-associated 22.6 32 0.0007 25.7 0.3 46 493-548 7-52 (56)
422 PRK08655 prephenate dehydrogen 22.5 90 0.0019 34.2 3.8 33 85-127 1-33 (437)
423 PRK05854 short chain dehydroge 22.5 1.3E+02 0.0027 31.1 4.8 33 86-127 15-47 (313)
424 PF01408 GFO_IDH_MocA: Oxidore 22.5 3.9E+02 0.0085 22.6 7.3 89 406-508 3-93 (120)
425 TIGR03466 HpnA hopanoid-associ 22.3 97 0.0021 31.7 4.0 33 85-127 1-33 (328)
426 TIGR03010 sulf_tusC_dsrF sulfu 22.2 1.4E+02 0.0029 26.0 4.2 39 86-127 1-39 (116)
427 PF13460 NAD_binding_10: NADH( 22.2 75 0.0016 29.5 2.8 29 100-128 4-32 (183)
428 KOG1429 dTDP-glucose 4-6-dehyd 22.2 1.4E+02 0.0031 30.6 4.7 36 81-126 24-59 (350)
429 PRK10446 ribosomal protein S6 22.0 1E+02 0.0022 31.7 4.0 35 85-127 1-35 (300)
430 PRK07588 hypothetical protein; 22.0 76 0.0017 33.8 3.2 32 85-127 1-32 (391)
431 COG1091 RfbD dTDP-4-dehydrorha 21.9 1.6E+02 0.0035 30.1 5.3 32 85-127 1-32 (281)
432 PF00185 OTCace: Aspartate/orn 21.9 4E+02 0.0086 24.5 7.5 75 404-487 3-83 (158)
433 PRK10818 cell division inhibit 21.7 1.4E+02 0.003 30.0 4.8 26 102-127 15-40 (270)
434 KOG3349 Predicted glycosyltran 21.6 2.4E+02 0.0051 26.1 5.6 94 405-508 6-107 (170)
435 PRK08849 2-octaprenyl-3-methyl 21.5 86 0.0019 33.4 3.4 33 83-126 2-34 (384)
436 TIGR03609 S_layer_CsaB polysac 21.5 8.5E+02 0.018 24.6 11.0 93 406-509 4-107 (298)
437 PRK09072 short chain dehydroge 21.5 1.3E+02 0.0028 29.8 4.5 25 100-127 14-38 (263)
438 PRK08063 enoyl-(acyl carrier p 21.3 1.3E+02 0.0027 29.5 4.4 25 100-127 13-37 (250)
439 PRK06197 short chain dehydroge 21.3 1.5E+02 0.0032 30.3 5.1 25 100-127 25-49 (306)
440 KOG0023 Alcohol dehydrogenase, 21.2 1.2E+02 0.0025 31.7 4.0 36 82-128 180-215 (360)
441 PRK12742 oxidoreductase; Provi 21.2 1.3E+02 0.0028 29.1 4.4 24 100-126 15-38 (237)
442 PF00852 Glyco_transf_10: Glyc 21.2 1.4E+02 0.003 31.6 4.9 78 471-560 221-303 (349)
443 PRK15059 tartronate semialdehy 21.1 1E+02 0.0022 31.7 3.7 30 85-125 1-30 (292)
444 PRK11790 D-3-phosphoglycerate 21.0 1.9E+02 0.0042 31.3 6.0 44 471-514 197-245 (409)
445 PLN02662 cinnamyl-alcohol dehy 20.9 1.5E+02 0.0032 30.4 5.0 34 84-127 4-37 (322)
446 COG1233 Phytoene dehydrogenase 20.9 1E+02 0.0022 34.3 3.9 33 82-125 1-33 (487)
447 PRK08226 short chain dehydroge 20.8 1.3E+02 0.0028 29.7 4.4 25 100-127 15-39 (263)
448 PF00142 Fer4_NifH: 4Fe-4S iro 20.8 1.1E+02 0.0024 31.0 3.7 27 100-126 8-36 (273)
449 PRK06703 flavodoxin; Provision 20.8 1.5E+02 0.0034 26.7 4.5 38 85-127 2-39 (151)
450 PRK07417 arogenate dehydrogena 20.8 1.1E+02 0.0024 31.1 3.9 32 85-127 1-32 (279)
451 PF01494 FAD_binding_3: FAD bi 20.7 94 0.002 32.0 3.5 32 85-127 2-33 (356)
452 TIGR01426 MGT glycosyltransfer 20.6 70 0.0015 34.1 2.5 21 107-127 12-32 (392)
453 PRK06523 short chain dehydroge 20.6 1.3E+02 0.0028 29.6 4.4 25 100-127 18-42 (260)
454 PRK04155 chaperone protein Hch 20.5 1.8E+02 0.0038 30.0 5.2 46 82-127 47-99 (287)
455 PRK08605 D-lactate dehydrogena 20.4 3.4E+02 0.0073 28.5 7.5 44 471-514 194-242 (332)
456 PLN02256 arogenate dehydrogena 20.4 1.5E+02 0.0032 30.8 4.7 37 80-127 32-68 (304)
457 PRK07825 short chain dehydroge 20.4 1.4E+02 0.003 29.8 4.5 25 100-127 14-38 (273)
458 COG0132 BioD Dethiobiotin synt 20.2 1.6E+02 0.0035 29.0 4.7 40 84-127 1-40 (223)
459 COG1087 GalE UDP-glucose 4-epi 20.2 1.1E+02 0.0024 31.6 3.6 26 100-125 6-31 (329)
460 PF00533 BRCT: BRCA1 C Terminu 20.2 97 0.0021 24.0 2.7 66 431-508 7-72 (78)
461 PRK09135 pteridine reductase; 20.2 1.4E+02 0.0031 28.9 4.5 25 100-127 15-39 (249)
462 PRK05568 flavodoxin; Provision 20.1 1.6E+02 0.0036 26.1 4.5 28 100-127 12-39 (142)
463 PF00205 TPP_enzyme_M: Thiamin 20.1 3E+02 0.0065 24.3 6.2 18 467-484 67-84 (137)
464 PRK08309 short chain dehydroge 20.1 1.4E+02 0.0031 28.1 4.2 22 106-127 11-32 (177)
465 COG2102 Predicted ATPases of P 20.0 7.4E+02 0.016 24.4 9.0 85 404-491 61-149 (223)
466 COG3349 Uncharacterized conser 20.0 95 0.0021 34.3 3.3 32 85-127 1-32 (485)
467 PRK11199 tyrA bifunctional cho 20.0 1E+02 0.0022 33.0 3.6 33 84-126 98-130 (374)
468 PRK06914 short chain dehydroge 20.0 1.4E+02 0.0031 29.8 4.5 25 100-127 12-36 (280)
No 1
>PLN02939 transferase, transferring glycosyl groups
Probab=100.00 E-value=7.9e-69 Score=601.03 Aligned_cols=467 Identities=33% Similarity=0.566 Sum_probs=393.5
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCc-----cEEEEEEeCCeeeEEEEEE
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-----DVVIELKVGDKIEKVRFFH 156 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 156 (612)
.++|||+||++|+.|+.++||+++++++|+++|+++||+|.||+|.|+.....+.. .......+++.....++++
T Consensus 479 ~~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~ 558 (977)
T PLN02939 479 SSGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKYDCMQYDQIRNLKVLDVVVESYFDGNLFKNKIWT 558 (977)
T ss_pred CCCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCCcccChhhhhcccccceEEEEeecCceeEEEEEE
Confidence 46899999999999999999999999999999999999999999999876532111 1122223333344578888
Q ss_pred eeecCceEEEEeC--h-hhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEE
Q 007224 157 CHKRGVDRVFVDH--P-WFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVF 233 (612)
Q Consensus 157 ~~~~gv~~~~l~~--~-~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvi 233 (612)
...+||+++|+++ | .||.+ ..+|+ +.|+..||.+||+++++++..+++ +|| ||
T Consensus 559 ~~~~GV~vyfId~~~~~~fF~R-------~~iYg------~~Dn~~RF~~FsrAaLe~~~~~~~----------~PD-II 614 (977)
T PLN02939 559 GTVEGLPVYFIEPQHPSKFFWR-------AQYYG------EHDDFKRFSYFSRAALELLYQSGK----------KPD-II 614 (977)
T ss_pred EEECCeeEEEEecCCchhccCC-------CCCCC------CccHHHHHHHHHHHHHHHHHhcCC----------CCC-EE
Confidence 8889999999984 3 37766 67886 689999999999999999988754 699 99
Q ss_pred EecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHH
Q 007224 234 VANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKA 313 (612)
Q Consensus 234 h~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 313 (612)
|||||++++++.+++..+...+ +.++|+||||||+.|||.|+...+..+|++....... +++... +...+++++.
T Consensus 615 H~HDW~TaLV~pll~~~y~~~~-~~~~ktVfTIHNl~yQG~f~~~~l~~lGL~~~~l~~~---d~le~~-~~~~iN~LK~ 689 (977)
T PLN02939 615 HCHDWQTAFVAPLYWDLYAPKG-FNSARICFTCHNFEYQGTAPASDLASCGLDVHQLDRP---DRMQDN-AHGRINVVKG 689 (977)
T ss_pred EECCccHHHHHHHHHHHHhhcc-CCCCcEEEEeCCCcCCCcCCHHHHHHcCCCHHHccCh---hhhhhc-cCCchHHHHH
Confidence 9999999998555555454444 4789999999999999999888888888886654211 121111 2256899999
Q ss_pred HHHhcCEEEecCHHHHHHHHccccCCccchhhhh--ccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHH
Q 007224 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 314 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l 391 (612)
++..||.|+|||+.+++++.. .+|..++..++ ..++.+|+||+|++.|+|.++++|+.+|++.++ .+|..++..+
T Consensus 690 GIv~AD~VtTVSptYA~EI~t--e~G~GL~~~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~~Ys~~dl-~GK~~nK~aL 766 (977)
T PLN02939 690 AIVYSNIVTTVSPTYAQEVRS--EGGRGLQDTLKFHSKKFVGILNGIDTDTWNPSTDRFLKVQYNANDL-QGKAANKAAL 766 (977)
T ss_pred HHHhCCeeEeeeHHHHHHHHH--HhccchHHHhccccCCceEEecceehhhcCCccccccccccChhhh-hhhhhhhHHH
Confidence 999999999999999999985 35555555443 468999999999999999999999999999997 6999999999
Q ss_pred HHHhCCCCC-CCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc-hhHHHHHHHHHHHCC--CceEEEeccC
Q 007224 392 QAEVGLPVD-RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYP--EKARGVAKFN 467 (612)
Q Consensus 392 ~~~~gl~~~-~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~--~~i~~~~~~~ 467 (612)
++++|++.+ ++.++|+||||+.++||++.+++|+..+..++++|+|+|+|+ ..+++.++++..+++ +++.+.+.++
T Consensus 767 RkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~FlG~~d 846 (977)
T PLN02939 767 RKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLILKYD 846 (977)
T ss_pred HHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEEeccC
Confidence 999999864 567999999999999999999999998877789999999996 456788888888875 4688888888
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec---------CceEEEecccccccCCCCCC
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---------GFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---------g~~G~l~~~~~~~~~~v~~~ 538 (612)
..+.+.+|++||++|+||++||||++++|||+||+|||++++||+.|+|.+ +.|||+| ++.
T Consensus 847 e~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf----------~~~ 916 (977)
T PLN02939 847 EALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF----------LTP 916 (977)
T ss_pred HHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe----------cCC
Confidence 888889999999999999999999999999999999999999999999975 5799988 999
Q ss_pred CHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 539 DVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 539 d~~~la~~l~~ll~~~--~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
|+++++++|.+++..+ +++.+.+|+++++.++|||+.++++|+++|++++..
T Consensus 917 D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~~dFSWe~~A~qYeeLY~~ll~~ 970 (977)
T PLN02939 917 DEQGLNSALERAFNYYKRKPEVWKQLVQKDMNIDFSWDSSASQYEELYQRAVAR 970 (977)
T ss_pred CHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999998743 367889999999999999999999999999998753
No 2
>PRK14099 glycogen synthase; Provisional
Probab=100.00 E-value=2.1e-67 Score=577.09 Aligned_cols=466 Identities=38% Similarity=0.617 Sum_probs=388.4
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccE-EEEEEeCCeeeEEEEEEeeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDV-VIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|++|||+||++|+.|+.|+||++++++.|+++|+++||+|.|+.|.|++..+.+.... ...+.+.. ...+++++...+
T Consensus 1 ~~~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 79 (485)
T PRK14099 1 MTPLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPGYPAVLAGIEDAEQVHSFPDLF-GGPARLLAARAG 79 (485)
T ss_pred CCCcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCCCcchhhhhcCceEEEEEeeeC-CceEEEEEEEeC
Confidence 5789999999999999999999999999999999999999999999998864433221 12222110 114677888889
Q ss_pred CceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc
Q 007224 161 GVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~ 240 (612)
||+++|++++.||.+ ...+|++..|.+|.||..||.+||++++++++.+.. .++|| |||+|||++
T Consensus 80 ~v~~~~~~~~~~f~r------~~~~y~~~~~~~~~d~~~rf~~f~~a~~~~~~~~~~--------~~~pD-IiH~Hdw~~ 144 (485)
T PRK14099 80 GLDLFVLDAPHLYDR------PGNPYVGPDGKDWPDNAQRFAALARAAAAIGQGLVP--------GFVPD-IVHAHDWQA 144 (485)
T ss_pred CceEEEEeChHhhCC------CCCCCCCccCCCCCcHHHHHHHHHHHHHHHHhhhcc--------CCCCC-EEEECCcHH
Confidence 999999999999987 124898877889999999999999999998876421 24799 999999999
Q ss_pred chHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCE
Q 007224 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 320 (612)
++++.+++...+ .++|+|+|+||+.+|+.|+...+..++++...... ++.. +...+++++.++..||.
T Consensus 145 ~l~~~~l~~~~~-----~~~~~V~TiHn~~~qg~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~i~~ad~ 212 (485)
T PRK14099 145 GLAPAYLHYSGR-----PAPGTVFTIHNLAFQGQFPRELLGALGLPPSAFSL----DGVE---YYGGIGYLKAGLQLADR 212 (485)
T ss_pred HHHHHHHHhCCC-----CCCCEEEeCCCCCCCCcCCHHHHHHcCCChHHcCc----hhhh---hCCCccHHHHHHHhcCe
Confidence 999998874221 46899999999999999987777777777654321 1110 12345789999999999
Q ss_pred EEecCHHHHHHHHccccCCccchhhh--hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCC
Q 007224 321 VLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~ 398 (612)
|+|+|+.+++++.. ..+|..++..+ +..++.+|+||+|++.|+|.+++++..+|+..++ +.+..++..+++++|++
T Consensus 213 vitVS~~~a~ei~~-~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~ 290 (485)
T PRK14099 213 ITTVSPTYALEIQG-PEAGMGLDGLLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETL-AARAANKAALQARFGLD 290 (485)
T ss_pred eeecChhHHHHHhc-ccCCcChHHHHHhhCCCeEEEecCCchhhccccccchhhhcCChhHH-HhHHHhHHHHHHHcCCC
Confidence 99999999999985 22344333332 2358999999999999999999999999999886 67888899999999998
Q ss_pred CCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 399 ~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
.+++.++|+++||+.++||++.+++|++++.+.+++|+|+|+|++.+++.++++..+++.++..+.++..++.+.++++|
T Consensus 291 ~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~~l~~~~~a~a 370 (485)
T PRK14099 291 PDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDEALAHLIQAGA 370 (485)
T ss_pred cccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHhcC
Confidence 77678999999999999999999999999977789999999998778889999998887767556677666666556789
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------ceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
|++|+||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++|+++|.+
T Consensus 371 Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~----------~~~d~~~La~ai~~ 440 (485)
T PRK14099 371 DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF----------SPVTADALAAALRK 440 (485)
T ss_pred CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe----------CCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999875 689987 99999999999998
Q ss_pred H---HHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 550 A---LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 550 l---l~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+ +++ ++.+.+|+++++.++|||+.++++|+++|++++.
T Consensus 441 a~~l~~d--~~~~~~l~~~~~~~~fSw~~~a~~y~~lY~~l~~ 481 (485)
T PRK14099 441 TAALFAD--PVAWRRLQRNGMTTDVSWRNPAQHYAALYRSLVA 481 (485)
T ss_pred HHHHhcC--HHHHHHHHHHhhhhcCChHHHHHHHHHHHHHHHh
Confidence 4 444 6788999999999999999999999999999874
No 3
>PRK14098 glycogen synthase; Provisional
Probab=100.00 E-value=4.6e-67 Score=574.99 Aligned_cols=467 Identities=29% Similarity=0.579 Sum_probs=392.0
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCccccc-CCc-c----EEEEEEeCCeeeEEEEEEe
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDT-D----VVIELKVGDKIEKVRFFHC 157 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~-~~~-~----~~~~~~~~~~~~~~~~~~~ 157 (612)
+|||+||++|+.|+.|+||++++++.|+++|+++||+|.|+.|.|+...+. +.. . ....+.++......+..+.
T Consensus 5 ~~~il~v~~E~~p~~k~Ggl~dv~~~Lp~al~~~g~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (489)
T PRK14098 5 NFKVLYVSGEVSPFVRVSALADFMASFPQALEEEGFEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLKEKTDLLHVKVT 84 (489)
T ss_pred CcEEEEEeecchhhcccchHHHHHHHHHHHHHHCCCeEEEEcCCCCchhhhhhccccceEEEEEEEeecCeeEEEEEEEe
Confidence 499999999999999999999999999999999999999999999887653 211 1 1222333332223333333
Q ss_pred eec--CceEEEEeChhhhhhhhcCCCCCcccCCC-CCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEE
Q 007224 158 HKR--GVDRVFVDHPWFLAKVVWGKTQSKIYGPR-TGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFV 234 (612)
Q Consensus 158 ~~~--gv~~~~l~~~~~~~~~~w~~~~~~~y~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih 234 (612)
..+ |+++++++++.||.+ ..+|++. .|.+|.||..||.+||++++++++.+.+ +|| |||
T Consensus 85 ~~~~~~v~~~~~~~~~~f~r-------~~~y~~~~~g~~~~d~~~rf~~f~~a~l~~~~~~~~----------~pD-iiH 146 (489)
T PRK14098 85 ALPSSKIQTYFLYNEKYFKR-------NGLFTDMSLGGDLKGSAEKVIFFNVGVLETLQRLGW----------KPD-IIH 146 (489)
T ss_pred cccCCCceEEEEeCHHHcCC-------CCcCCCCccCCCCCcHHHHHHHHHHHHHHHHHhcCC----------CCC-EEE
Confidence 333 699999999999988 6799876 6779999999999999999999987654 699 999
Q ss_pred ecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHH
Q 007224 235 ANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG 314 (612)
Q Consensus 235 ~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 314 (612)
+|||+++++|.+++..++....+.++|+|+|+||+.+||.++...+..+ ++..+...+. ......++++.+
T Consensus 147 ~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~-~~~~~~~~~~--------~~~~~~n~lk~~ 217 (489)
T PRK14098 147 CHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKL-LPEEVCSGLH--------REGDEVNMLYTG 217 (489)
T ss_pred ecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHh-CCHHhhhhhh--------hcCCcccHHHHH
Confidence 9999999999999987655455568999999999999998876554433 4433221110 012457899999
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhh--ccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~ 392 (612)
+..||.|+|||+.+++++.....+|..++..++ ..++.+|+||+|++.|+|.+++.+..+|+..++ +.|..++..++
T Consensus 218 i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~p~~d~~~~~~~~~~~~-~~k~~~k~~l~ 296 (489)
T PRK14098 218 VEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWNPSTDKLIKKRYSIERL-DGKLENKKALL 296 (489)
T ss_pred HHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccCCcccccccccCCcchh-hhHHHHHHHHH
Confidence 999999999999999999752223333333332 358999999999999999999899999999886 57888899999
Q ss_pred HHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHH
Q 007224 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 393 ~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~ 472 (612)
+++|++.+++.++|+++||+.++||++.+++|+.++.+++++|+|+|+|+..+++.++++..++++++.+.+.++.++++
T Consensus 297 ~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~~~~~~ 376 (489)
T PRK14098 297 EEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFTDAFFH 376 (489)
T ss_pred HHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecCHHHHH
Confidence 99999988888999999999999999999999999987799999999998778899999999888889888889999999
Q ss_pred HHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec----CceEEEecccccccCCCCCCCHHHHHHHHH
Q 007224 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~----g~~G~l~~~~~~~~~~v~~~d~~~la~~l~ 548 (612)
.+|++||++++||++|+||++++|||+||+|||++++||+.|++.+ +.+|+++ ++.|+++++++|.
T Consensus 377 ~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~----------~~~d~~~la~ai~ 446 (489)
T PRK14098 377 LAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF----------HDYTPEALVAKLG 446 (489)
T ss_pred HHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe----------CCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999874 6799988 9999999999999
Q ss_pred HHHHhh-CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 549 RALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 549 ~ll~~~-~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
++++.+ +++.+.+++++++.++|||+.++++|+++|++++
T Consensus 447 ~~l~~~~~~~~~~~~~~~~~~~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 447 EALALYHDEERWEELVLEAMERDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred HHHHHHcCHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHh
Confidence 987543 2678888999989999999999999999999886
No 4
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=100.00 E-value=3.1e-63 Score=546.41 Aligned_cols=459 Identities=45% Similarity=0.773 Sum_probs=393.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCc----cEEEEEEeCCeeeEEEEEEeeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT----DVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|||+||++|++|+.++||+++++++|+++|+++||+|+|++|.|+...+.+.. .....+.+++....+++++...+
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRTLYVKVFEGVVE 80 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCCcChhhhhccCeEEEEEEEEeecCceeEEEEEEEEEC
Confidence 89999999999999999999999999999999999999999999987665432 23445666777778889999999
Q ss_pred CceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc
Q 007224 161 GVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~ 240 (612)
|+++++++++.++.+ ...+|++ +|.++..||.+|+++++++++.++. +|| |||+|+|++
T Consensus 81 ~v~~~~i~~~~~~~r------~~~~y~~----~~~d~~~r~~~f~~a~~~~~~~~~~----------~~D-iiH~hdw~~ 139 (473)
T TIGR02095 81 GVPVYFIDNPSLFDR------PGGIYGD----DYPDNAERFAFFSRAAAELLSGLGW----------QPD-VVHAHDWHT 139 (473)
T ss_pred CceEEEEECHHHcCC------CCCCCCC----CCCCHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEECCcHH
Confidence 999999999988765 1247875 7899999999999999999887643 699 999999999
Q ss_pred chHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCE
Q 007224 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 320 (612)
++++.+++..++. .++|+|+|+|+..+++.++...+..++++..+... ..+. ....+++++.++..||.
T Consensus 140 ~~~~~~l~~~~~~----~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~k~~~~~ad~ 208 (473)
T TIGR02095 140 ALVPALLKAVYRP----NPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHM----EGLE---FYGRVNFLKGGIVYADR 208 (473)
T ss_pred HHHHHHHHhhccC----CCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCc----hhhh---cCCchHHHHHHHHhCCc
Confidence 9999999877521 14899999999999998887666666766443221 1111 11357899999999999
Q ss_pred EEecCHHHHHHHHccccCCccchhhh--hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCC
Q 007224 321 VLTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~ 398 (612)
|+++|+.+++++... .+|..++..+ +..++.+|+||+|.+.|+|.+++++..+|+..++ ..+...+..+++++|++
T Consensus 209 v~tVS~~~~~ei~~~-~~~~~l~~~l~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~ 286 (473)
T TIGR02095 209 VTTVSPTYAREILTP-EFGYGLDGVLKARSGKLRGILNGIDTEVWNPATDPYLKANYSADDL-AGKAENKEALQEELGLP 286 (473)
T ss_pred CeecCHhHHHHhcCC-cCCccchhHHHhcCCCeEEEeCCCCccccCCCCCcccccCcCccch-hhhhhhHHHHHHHcCCC
Confidence 999999999998752 3444443322 2458999999999999999999999999998875 46777788999999998
Q ss_pred CCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 399 ~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
.+++.++|+|+||+.++||++.+++|++++.+.+++|+|+|+|++.+++.++++..+++.++.+...++.++++.++++|
T Consensus 287 ~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 366 (473)
T TIGR02095 287 VDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYDEALAHLIYAGA 366 (473)
T ss_pred ccCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHHHhC
Confidence 76678999999999999999999999999987789999999998778889999998888888888888999888999999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC------ceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
|++++||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.+++.
T Consensus 367 Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 367 DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLF----------EEYDPGALLAALSRALR 436 (473)
T ss_pred CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998 899988 99999999999999998
Q ss_pred hh--CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 007224 553 TY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 553 ~~--~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l 587 (612)
.+ +++.+.+|+++++.++|||+.++++|+++|+++
T Consensus 437 ~~~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 437 LYRQDPSLWEALQKNAMSQDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHhcCHHHHHHHHHHHhccCCCcHHHHHHHHHHHHhC
Confidence 32 267889999999989999999999999999864
No 5
>PLN02316 synthase/transferase
Probab=100.00 E-value=1.9e-62 Score=559.57 Aligned_cols=434 Identities=33% Similarity=0.566 Sum_probs=365.0
Q ss_pred ccccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEe
Q 007224 78 MIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHC 157 (612)
Q Consensus 78 ~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (612)
.....++|||+||+.|+.|+.++||+++++.+|+++|+++||+|.|++|.|+...............+......+++++.
T Consensus 581 ~~~~~~pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y~~i~~~~~~~~~~~~~~~~~~~~~~v~~~ 660 (1036)
T PLN02316 581 GIAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKYDCLNLSHVKDLHYQRSYSWGGTEIKVWFG 660 (1036)
T ss_pred CCCCCCCcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCCcccchhhcccceEEEEeccCCEEEEEEEE
Confidence 34446679999999999999999999999999999999999999999999986543221111111122222235678888
Q ss_pred eecCceEEEEeCh-hhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEec
Q 007224 158 HKRGVDRVFVDHP-WFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 236 (612)
Q Consensus 158 ~~~gv~~~~l~~~-~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h 236 (612)
..+|+++++++++ .+|.+ ..+|+ |.|+..||.+||++++++++.+.+ +|| |||||
T Consensus 661 ~~~GV~vyfl~~~~~~F~r-------~~~Yg------~~Dd~~RF~~F~~Aale~l~~~~~----------~PD-IIHaH 716 (1036)
T PLN02316 661 KVEGLSVYFLEPQNGMFWA-------GCVYG------CRNDGERFGFFCHAALEFLLQSGF----------HPD-IIHCH 716 (1036)
T ss_pred EECCcEEEEEeccccccCC-------CCCCC------chhHHHHHHHHHHHHHHHHHhcCC----------CCC-EEEEC
Confidence 8899999999976 36655 45675 789999999999999999987654 699 99999
Q ss_pred CCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHH
Q 007224 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 316 (612)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 316 (612)
||++++++.+++..++..+ +.++|+|+|+|++.++. +.++.++.
T Consensus 717 DW~talva~llk~~~~~~~-~~~~p~V~TiHnl~~~~-----------------------------------n~lk~~l~ 760 (1036)
T PLN02316 717 DWSSAPVAWLFKDHYAHYG-LSKARVVFTIHNLEFGA-----------------------------------NHIGKAMA 760 (1036)
T ss_pred CChHHHHHHHHHHhhhhhc-cCCCCEEEEeCCcccch-----------------------------------hHHHHHHH
Confidence 9999999999988765443 36789999999876521 34567889
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhC
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 396 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g 396 (612)
.+|.|+|||+.+++++... ..+.. +..++.+|+||||++.|+|.++++++.+|++.++..+|..++..+|+++|
T Consensus 761 ~AD~ViTVS~tya~EI~~~--~~l~~----~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~~~gK~~~k~~Lr~~lG 834 (1036)
T PLN02316 761 YADKATTVSPTYSREVSGN--SAIAP----HLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENVVEGKRAAKEALQQRLG 834 (1036)
T ss_pred HCCEEEeCCHHHHHHHHhc--cCccc----ccCCEEEEECCccccccCCcccccccccCCchhhhhhhhhhHHHHHHHhC
Confidence 9999999999999999852 22221 12389999999999999999999999999999988888899999999999
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc-hhHHHHHHHHHHHC----CCceEEEeccChHHH
Q 007224 397 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILY----PEKARGVAKFNIPLA 471 (612)
Q Consensus 397 l~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~----~~~i~~~~~~~~~~~ 471 (612)
++. ++.|+|+|+|||.++||++.|++|+.++.+.+++|+|+|+|+ ..+++.+++++.++ ++++.+.+.++..+.
T Consensus 835 L~~-~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~g~~de~la 913 (1036)
T PLN02316 835 LKQ-ADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLCLTYDEPLS 913 (1036)
T ss_pred CCc-ccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEEecCCHHHH
Confidence 983 367899999999999999999999999877789999999985 44677888888754 456777788888888
Q ss_pred HHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC-------------ceEEEecccccccCCCCCC
Q 007224 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-------------FTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 472 ~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g-------------~~G~l~~~~~~~~~~v~~~ 538 (612)
+.+|++||++|+||++||||++++|||+||+|||++++||+.|+|.++ .|||+| ++.
T Consensus 914 h~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf----------~~~ 983 (1036)
T PLN02316 914 HLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSF----------DGA 983 (1036)
T ss_pred HHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEe----------CCC
Confidence 899999999999999999999999999999999999999999999884 699988 999
Q ss_pred CHHHHHHHHHHHHHhh-C-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 539 DVAAVSTTVRRALATY-G-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 539 d~~~la~~l~~ll~~~-~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
|+++++.+|.+++.++ . +..+.+++++++.++|||+.++++|+++|+++.
T Consensus 984 d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 984 DAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 9999999999999874 2 355688899999999999999999999999875
No 6
>PRK00654 glgA glycogen synthase; Provisional
Probab=100.00 E-value=3.2e-62 Score=536.66 Aligned_cols=453 Identities=42% Similarity=0.692 Sum_probs=377.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccC-CccEEEEEEeCCeeeEEEEEE--eeecC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAW-DTDVVIELKVGDKIEKVRFFH--CHKRG 161 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~g 161 (612)
|||+||++|++|+.++||+++++.+|+++|+++||+|+|++|.|+...+.. +.....++ ...+++. ...+|
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~y~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g 74 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPGYPAIREKLRDAQVVGRL------DLFTVLFGHLEGDG 74 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecCCcchhhhhcCceEEEEe------eeEEEEEEeEEcCC
Confidence 899999999999999999999999999999999999999999998765432 11111111 1133333 35689
Q ss_pred ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc
Q 007224 162 VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~ 241 (612)
+++++++++.++.+ ..+|+ |.++..||.+||++++++++.++. +|| |||+|+|+++
T Consensus 75 v~v~~v~~~~~~~~-------~~~y~------~~d~~~r~~~f~~~~~~~~~~~~~----------~pD-iiH~h~w~~~ 130 (466)
T PRK00654 75 VPVYLIDAPHLFDR-------PSGYG------YPDNGERFAFFSWAAAEFAEGLDP----------RPD-IVHAHDWHTG 130 (466)
T ss_pred ceEEEEeCHHHcCC-------CCCCC------CcChHHHHHHHHHHHHHHHHhcCC----------CCc-eEEECCcHHH
Confidence 99999999998877 56776 789999999999999999987753 699 9999999999
Q ss_pred hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEE
Q 007224 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 321 (612)
+++.+++..+ ..+ +.++|+|+|+|++.+++.++...+..++++..... .+... .....++++.++..||.|
T Consensus 131 ~~~~~l~~~~-~~~-~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~ad~v 201 (466)
T PRK00654 131 LIPALLKEKY-WRG-YPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFH----LEGLE---FYGQISFLKAGLYYADRV 201 (466)
T ss_pred HHHHHHHHhh-hcc-CCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcC----chhhh---cCCcccHHHHHHHhcCcC
Confidence 9999999765 222 35789999999999999888766666677654422 11110 113468899999999999
Q ss_pred EecCHHHHHHHHccccCCccchhhh--hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 322 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
+++|+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|.+++.+..+|++.++ +.+..+++.+++++|++
T Consensus 202 itvS~~~~~ei~~-~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~-~~k~~~k~~l~~~~gl~- 278 (466)
T PRK00654 202 TTVSPTYAREITT-PEFGYGLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDL-EGKAENKRALQERFGLP- 278 (466)
T ss_pred eeeCHHHHHHhcc-ccCCcChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhh-hchHHHHHHHHHHhCCC-
Confidence 9999999999875 22332222222 2348999999999999999988889999998875 57778889999999998
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
+++.++|+|+||+.++||++.+++|++++.+++++|+|+|+|+..+++.++++..+++.++.....++.++.+.+|++||
T Consensus 279 ~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~~~aD 358 (466)
T PRK00654 279 DDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDEALAHRIYAGAD 358 (466)
T ss_pred CCCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHHhhCC
Confidence 33578999999999999999999999999777999999999987788899999999887777777788788888999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC------ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
++|+||++|+||++++|||+||+|||++++||+.|+|.++ .+|+++ ++.|+++++++|.++++.
T Consensus 359 v~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv----------~~~d~~~la~~i~~~l~~ 428 (466)
T PRK00654 359 MFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVF----------DDFNAEDLLRALRRALEL 428 (466)
T ss_pred EEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999988 899988 999999999999999874
Q ss_pred hC-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 554 YG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 554 ~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+. ++.+.+|+++++.++|||+.++++|+++|++++.
T Consensus 429 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 429 YRQPPLWRALQRQAMAQDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred hcCHHHHHHHHHHHhccCCChHHHHHHHHHHHHHHhh
Confidence 32 5668899999988999999999999999998863
No 7
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=100.00 E-value=4.1e-59 Score=514.39 Aligned_cols=462 Identities=44% Similarity=0.747 Sum_probs=388.0
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEE----EEEEeCCeeeEEEEEEeeecC
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVV----IELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g 161 (612)
||+||++|++|+.++||+++++.+|+++|+++||+|+|++|.|+...+.+..... ..+..+.....++.++...+|
T Consensus 1 ~Il~v~~E~~p~~k~GGl~~~~~~L~~aL~~~G~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (476)
T cd03791 1 KVLFVASEVAPFAKTGGLGDVVGALPKALAKLGHDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPEYVGVFELPVDG 80 (476)
T ss_pred CEEEEEccccccccCCcHHHHHHHHHHHHHHCCCeEEEEecCCcchhhHhccCeEEEEEEeeccCCceeEEEEEEEEeCC
Confidence 6999999999999999999999999999999999999999999987765443322 234455566678888888899
Q ss_pred ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc
Q 007224 162 VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~ 241 (612)
++++++++|.++.+ ..+| +..+.+|.++..+|..|+++++++++.+.. +|| |||+|+|+++
T Consensus 81 v~~~~l~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~f~~~~~~~l~~~~~----------~pD-viH~hd~~t~ 141 (476)
T cd03791 81 VPVYFLDNPDYFDR-------PGLY-DDSGYDYEDNAERFALFSRAALELLRRLGW----------KPD-IIHCHDWHTG 141 (476)
T ss_pred ceEEEEcChHHcCC-------CCCC-CccCCCCccHHHHHHHHHHHHHHHHHhcCC----------CCc-EEEECchHHH
Confidence 99999999988876 3444 445567999999999999999999988643 699 9999999999
Q ss_pred hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEE
Q 007224 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 321 (612)
+++.+++..++. ..+.++|+|+|+|++.+++.++...+..++.+... . ...... ......++++.++..||.|
T Consensus 142 ~~~~~l~~~~~~-~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~--~-~~~~~~---~~~~~~~~~~~~~~~ad~v 214 (476)
T cd03791 142 LVPALLKEKYAD-PFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEE--L-FHIDGL---EFYGQVNFLKAGIVYADAV 214 (476)
T ss_pred HHHHHHHHhhcc-ccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccc--h-hhhccc---ccCCcccHHHHHHHhcCcC
Confidence 999999987643 33468999999999999998776555444433210 0 001111 1224568899999999999
Q ss_pred EecCHHHHHHHHccccCCccchhhh--hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 322 LTVSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
+++|+.+++++.. ..+|..++..+ +..++.+|+||+|.+.|+|..++.+..+|+... ...+...+..+++++|++.
T Consensus 215 ~~vS~~~~~~i~~-~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~~~~-~~~~~~~k~~l~~~~g~~~ 292 (476)
T cd03791 215 TTVSPTYAREILT-PEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYSADD-LEGKAENKAALQEELGLPV 292 (476)
T ss_pred eecCHhHHHHhCC-CCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCCccc-cccHHHHHHHHHHHcCCCc
Confidence 9999999999875 22333333333 235899999999999999998888888888544 4688888999999999986
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
+++.++|+|+||+.++||++.++++++++.+.+++|+|+|+|...+++.++++..++++++.....++.++.+.+++.||
T Consensus 293 ~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD 372 (476)
T cd03791 293 DPDAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGYDEALAHLIYAGAD 372 (476)
T ss_pred CCCCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHhCC
Confidence 77889999999999999999999999999877799999999987788899999888777788888888888889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCc------eEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF------TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~------~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
++++||++|+||++++|||+||+|||++++||+.|+|.++. +|+++ ++.|+++++++|.++++.
T Consensus 373 v~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~----------~~~~~~~l~~~i~~~l~~ 442 (476)
T cd03791 373 FFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVF----------EGYNADALLAALRRALAL 442 (476)
T ss_pred EEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEe----------CCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988 99988 999999999999999976
Q ss_pred hC-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 554 YG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 554 ~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
+. ++.+.+++++++.+.|||+.++++|+++|+
T Consensus 443 ~~~~~~~~~~~~~~~~~~fsw~~~a~~~~~~y~ 475 (476)
T cd03791 443 YRDPEAWRKLQRNAMAQDFSWDRSAKEYLELYR 475 (476)
T ss_pred HcCHHHHHHHHHHHhccCCChHHHHHHHHHHHh
Confidence 53 688899999999999999999999999996
No 8
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.7e-59 Score=498.69 Aligned_cols=463 Identities=40% Similarity=0.638 Sum_probs=398.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCcc--E--EEEEEeCCeeeEEEEEEeeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTD--V--VIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|||++++.|+.|..|+||++++++.|+++|++.||+|.|+.|.|+...+.|... . ...+..+.........+..+.
T Consensus 1 M~Il~v~~E~~p~vK~GGLaDv~~alpk~L~~~g~~v~v~lP~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (487)
T COG0297 1 MKILFVASEIFPFVKTGGLADVVGALPKALAKRGVDVRVLLPSYPKVQKEWRDLLKVVGKFGVLKGGRAQLFIVKEYGKD 80 (487)
T ss_pred CcceeeeeeecCccccCcHHHHHHHhHHHHHhcCCeEEEEcCCchhhhhhhccccceeeEeeeeecccceEEEEEeeccc
Confidence 899999999999999999999999999999999999999999999777666542 1 223333333333333343334
Q ss_pred C-ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc
Q 007224 161 G-VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH 239 (612)
Q Consensus 161 g-v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~ 239 (612)
+ ++.++++++.++++ . +..+.+|.|+..||..|++++++.+...... ..|| |||+||||
T Consensus 81 ~~v~~~lid~~~~f~r-------~----~~~~~~~~d~~~Rf~~F~~a~~~~~~~~~~~--------~~pD-IvH~hDWq 140 (487)
T COG0297 81 GGVDLYLIDNPALFKR-------P----DSTLYGYYDNAERFAFFSLAAAELAPLGLIS--------WLPD-IVHAHDWQ 140 (487)
T ss_pred CCCcEEEecChhhcCc-------c----ccccCCCCcHHHHHHHHHHHHHHHhhhcCCC--------CCCC-EEEeecHH
Confidence 3 99999999988876 1 2334459999999999999999998765410 2699 99999999
Q ss_pred cchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcC
Q 007224 240 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad 319 (612)
++++|.+++..++. ...+|.|||+||+.|||.|+......+++|..+...+. ...+ ...+++|.++..||
T Consensus 141 t~L~~~~lk~~~~~---~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~-l~~~------~~~~~lK~gi~~ad 210 (487)
T COG0297 141 TGLLPAYLKQRYRS---GYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFG-LEFY------GQISFLKGGLYYAD 210 (487)
T ss_pred HHHHHHHHhhcccc---cccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhce-eeec------Ccchhhhhhheecc
Confidence 99999999986511 25899999999999999999667789999976655211 1111 34689999999999
Q ss_pred EEEecCHHHHHHHHccccCCccchhhhh--ccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCC
Q 007224 320 MVLTVSPHYAQELVSGEDKGVELDNIIR--KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 320 ~vi~vS~~~~~~l~~~~~~g~~~~~~~~--~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl 397 (612)
.|.+||+.+++++. ...+|..++..++ ..++++|.||+|...|+|.+++++..+|+..+.. ++..++..+++++||
T Consensus 211 ~vttVSptYa~Ei~-t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~-~k~~nk~~L~~~~gL 288 (487)
T COG0297 211 AVTTVSPTYAGEIY-TPEYGEGLEGLLSWRSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLP-AKAENKVALQERLGL 288 (487)
T ss_pred EEEEECHHHHHhhc-cccccccchhhhhhccccEEEEEeeEEecccCcccccchhccCCccchh-hhHHHHHHHHHHhCC
Confidence 99999999999998 3667776666554 3689999999999999999999999999999986 599999999999999
Q ss_pred CCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007224 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 398 ~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ 477 (612)
+.+.+.|++.++||+..|||+|.+++++..+.+..++++++|+|+..++..+..+++.+++++.....++.++.+.++++
T Consensus 289 ~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~ag 368 (487)
T COG0297 289 DVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYDEPLAHLIYAG 368 (487)
T ss_pred CCCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhc
Confidence 98888999999999999999999999999999988999999999989999999999999998888899999999999999
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec--------CceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--------g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
||++++||++||||+++++||++|+++|+..+||++|+|.+ ..|||+| .+.++++++.+|.+
T Consensus 369 aD~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f----------~~~~~~~l~~al~r 438 (487)
T COG0297 369 ADVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLF----------LQTNPDHLANALRR 438 (487)
T ss_pred CCEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEE----------ecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986 5899998 88899999999999
Q ss_pred HHHhhC-HHH-HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 550 ALATYG-TQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 550 ll~~~~-~~~-~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
++.-+. ++. ++.+..++|..+|||+..+++|.++|+.+..
T Consensus 439 A~~~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~~~~ 480 (487)
T COG0297 439 ALVLYRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYKPLLS 480 (487)
T ss_pred HHHHhhCCHHHHHHHHHhhcccccCchhHHHHHHHHHHHHhc
Confidence 998765 344 8888899999999999999999999999874
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=6.1e-40 Score=363.57 Aligned_cols=470 Identities=19% Similarity=0.251 Sum_probs=366.3
Q ss_pred EEEEecccc-----CccccccHHHHhhhhHHHHHhCCCeEEEEeecCCc-c--------------cccCCc---------
Q 007224 87 ILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-Y--------------KDAWDT--------- 137 (612)
Q Consensus 87 Il~v~~~~~-----P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~-~--------------~~~~~~--------- 137 (612)
|++++.||. |. ..||+|........+++..|...+.++..|.+ | .+.|+.
T Consensus 1 ~ayf~~E~g~~~~~p~-ysGGLG~LAgd~l~saa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~~ 79 (601)
T TIGR02094 1 VAYFSMEYGLHESLPI-YSGGLGVLAGDHLKSASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKVL 79 (601)
T ss_pred CeEEeeccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEEe
Confidence 456666643 42 58999999999999999999999999976552 1 012321
Q ss_pred -----cEEEEEEeCCeeeEEEEEEeeecCceEEEEeChh----hhhhhhcCCCC-CcccCCCCCCCCcchhHHHHHHHHH
Q 007224 138 -----DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPW----FLAKVVWGKTQ-SKIYGPRTGEDYQDNQLRFSLLCQA 207 (612)
Q Consensus 138 -----~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~----~~~~~~w~~~~-~~~y~~~~~~~~~~~~~~~~~~~~~ 207 (612)
.....+.+.++...++.+....+++++++++++. ++.+ .. ..+|++ |...++.++.+|+.+
T Consensus 80 ~~~g~~~~~~v~i~g~~~~~rlw~~~~~~v~lylld~~~~~n~~~~R-----~it~~LY~~----D~~~R~~Qe~fl~~a 150 (601)
T TIGR02094 80 DTDGKWLKISVRIRGRDVYAKVWRVQVGRVPLYLLDTNIPENSEDDR-----WITGRLYGG----DKEMRIAQEIVLGIG 150 (601)
T ss_pred cCCCCeEEEEEecCCcEEEEEEEEEEeCCCCEEEecCCCcccchhhc-----CccCCCCCC----CHHHHHHHHHHHHHH
Confidence 1246677777778889998888899999999885 5554 22 246763 345666777999999
Q ss_pred HHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCC-----C--CCceEEEEEecCccccc--CCcc
Q 007224 208 ALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGM-----Y--KSAKVVFCIHNIAYQGR--FAFE 278 (612)
Q Consensus 208 ~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~-----~--~~~~vv~~iH~~~~~~~--~~~~ 278 (612)
.++.++.+++ +|| |||+||||+++++.++.+..-..+. + ...+++||+|++.+||. |+..
T Consensus 151 ~l~~l~~l~~----------~pd-viH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~ 219 (601)
T TIGR02094 151 GVRALRALGI----------DPD-VYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPED 219 (601)
T ss_pred HHHHHHHcCC----------Cce-EEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHH
Confidence 9999988764 699 9999999999999887543211110 0 14789999999999997 8876
Q ss_pred ccc--------ccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhh--hc
Q 007224 279 DFG--------LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNII--RK 348 (612)
Q Consensus 279 ~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~--~~ 348 (612)
.+. .++++.......... .+-.....++++.++..||.|.+||+.+.+.... .++. +...+ +.
T Consensus 220 ~~~~~~~~~~~~~gl~~~~~~~~~~~----~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~--l~~~-l~~~~~~~~ 292 (601)
T TIGR02094 220 LMRKYFGDYAANLGLPREQLLALGRE----NPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRK--MWQF-LYPGYEEEE 292 (601)
T ss_pred HHHHHhhhhhhHhCCCHHHHHhhhhh----ccCccCceeHHHHHHHhCCeeeeecHHHHHHHHH--HHHh-hhhhccccc
Confidence 663 356665543322111 1000135799999999999999999999883331 0110 10111 12
Q ss_pred cCeEEeeCCCccCccCCCCccccccccCcch---------------------hhcchHHHHHHHHH--------------
Q 007224 349 TGIKGIVNGMDVQEWNPLTDKYIGVKYDAST---------------------VMDAKPLLKEALQA-------------- 393 (612)
Q Consensus 349 ~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~---------------------~~~~~~~~k~~l~~-------------- 393 (612)
.++..|.||||...|.|.+++.+..+|+.++ +.+.|..+|.++++
T Consensus 293 ~~i~gItNGId~~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g 372 (601)
T TIGR02094 293 VPIGYVTNGVHNPTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRG 372 (601)
T ss_pred CCccceeCCccccccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Confidence 3689999999999999999999999999888 35788999999988
Q ss_pred -------HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCchh------HHHHHHHHHH
Q 007224 394 -------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEI 454 (612)
Q Consensus 394 -------~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~~~------~~~~l~~l~~ 454 (612)
++|++.+++.+++++++|+.++||++++++++.++.+ .+++||++|++.+. +.+.+.++++
T Consensus 373 ~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~gk~~i~~i~~la~ 452 (601)
T TIGR02094 373 ADAAILMATDRFLDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGEGKEIIQRIVEFSK 452 (601)
T ss_pred CcchhhhhhccccCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccchHHHHHHHHHHHHh
Confidence 5788888999999999999999999999999988853 47999999999855 8999999998
Q ss_pred H--CCCceEEEeccChHHHHHHHHhcCEEEe-CCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEeccccc
Q 007224 455 L--YPEKARGVAKFNIPLAHMIIAGADFILI-PSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSV 530 (612)
Q Consensus 455 ~--~~~~i~~~~~~~~~~~~~~l~~adi~l~-pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~ 530 (612)
+ +++++.+...|+.++++.++++||++++ ||+ +|+||++.+-||..|.+.+++-.|...|.. ++.|||.||....
T Consensus 453 ~~~~~~kv~f~~~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~ 531 (601)
T TIGR02094 453 RPEFRGRIVFLENYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEE 531 (601)
T ss_pred cccCCCCEEEEcCCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCcc
Confidence 8 8889999999999999999999999999 999 999999999999999999999999888877 6789999964211
Q ss_pred --ccCCCCCCCHHHHHHHHHHHH-Hhh-C------HHHHHHHHHHHHHh---cCCcHHHHHHHHHHHH
Q 007224 531 --DCEAVDPVDVAAVSTTVRRAL-ATY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEETLL 585 (612)
Q Consensus 531 --~~~~v~~~d~~~la~~l~~ll-~~~-~------~~~~~~~~~~~~~~---~~sw~~~a~~~~~~y~ 585 (612)
+.+..|..|.++|-++|++.+ ..+ + +..+.++.+++|.. .|||++++++|.++|.
T Consensus 532 ~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 532 YDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 223345789999999998877 322 1 34689999999987 7999999999999873
No 10
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=1.1e-39 Score=372.08 Aligned_cols=444 Identities=18% Similarity=0.160 Sum_probs=289.4
Q ss_pred CCCceEEEEeccccC---------ccccccHHHHhhhhHHHHHhCC--CeEEEEeecCCcccccCCccEEEEEEeCCe-e
Q 007224 82 GVGLNILFVGTEVAP---------WSKTGGLGDVLGGLPPALAANG--HRVMTIAPRYDQYKDAWDTDVVIELKVGDK-I 149 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P---------~~~~GG~~~~~~~La~~L~~~G--h~V~vit~~~~~~~~~~~~~~~~~~~~~~~-~ 149 (612)
.++|.|++|+..-.| ...+||...|+.+|+++|+++| |+|+++|...+...-.|+.....+.. .+. .
T Consensus 167 ~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~-~~~~~ 245 (1050)
T TIGR02468 167 EKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML-TPRSS 245 (1050)
T ss_pred cCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccc-ccccc
Confidence 457999999964222 2468999999999999999999 99999998754221123222221110 000 0
Q ss_pred eEEEEEEeeecCceEEEEeCh---hhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhh----ccCCCCC
Q 007224 150 EKVRFFHCHKRGVDRVFVDHP---WFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL----NLNSNKY 222 (612)
Q Consensus 150 ~~~~~~~~~~~gv~~~~l~~~---~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~ 222 (612)
+.........+|+.++.++.. .+..| ..-+.....|...+++.++.+ ...
T Consensus 246 ~~~~~~~~~~~g~rIvRip~GP~~~~l~K-------------------e~L~~~l~ef~d~~l~~~~~~~~~~~~~---- 302 (1050)
T TIGR02468 246 ENDGDEMGESSGAYIIRIPFGPRDKYIPK-------------------EELWPYIPEFVDGALSHIVNMSKVLGEQ---- 302 (1050)
T ss_pred ccccccccCCCCeEEEEeccCCCCCCcCH-------------------HHHHHHHHHHHHHHHHHHHhhhhhhhhh----
Confidence 000111123358888877521 12333 011122344555555544321 000
Q ss_pred CC-C-CCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCC-CcccccccccccCC
Q 007224 223 FS-G-PYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNL-PAQFKSSFDFIDGY 299 (612)
Q Consensus 223 ~~-~-~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~ 299 (612)
+. + +-.|| |||+|+|.+++++..++.. .++|+|+|.|.+.-... ..+...+. +..-. ...|
T Consensus 303 ~~~~~~~~pD-vIHaHyw~sG~aa~~L~~~-------lgVP~V~T~HSLgr~K~---~~ll~~g~~~~~~~-----~~~y 366 (1050)
T TIGR02468 303 IGSGHPVWPY-VIHGHYADAGDSAALLSGA-------LNVPMVLTGHSLGRDKL---EQLLKQGRMSKEEI-----NSTY 366 (1050)
T ss_pred hccccCCCCC-EEEECcchHHHHHHHHHHh-------hCCCEEEECccchhhhh---hhhccccccccccc-----cccc
Confidence 00 0 11389 9999999999999999987 48999999997532110 00000000 00000 0000
Q ss_pred CCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccch--hh----hh---------ccCeEEeeCCCccCccC
Q 007224 300 NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELD--NI----IR---------KTGIKGIVNGMDVQEWN 364 (612)
Q Consensus 300 ~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~--~~----~~---------~~~i~vI~Ngvd~~~~~ 364 (612)
. ..+.+..++..+..||.||++|+..++++...+. +.++. .. ++ ..++.|||||+|++.|.
T Consensus 367 ~---~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY~-~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~ 442 (1050)
T TIGR02468 367 K---IMRRIEAEELSLDASEIVITSTRQEIEEQWGLYD-GFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIV 442 (1050)
T ss_pred c---hHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHhc-cCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHcc
Confidence 0 1134456678899999999999999998765321 11210 00 00 12899999999999998
Q ss_pred CCCccccccccCcchhh------cchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc----CCcE
Q 007224 365 PLTDKYIGVKYDASTVM------DAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQ 434 (612)
Q Consensus 365 p~~~~~~~~~~~~~~~~------~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~----~~~~ 434 (612)
|..... +..... ...+.....++..+ . ++++++|+|+||+.++||++.|++|+.++.. +++.
T Consensus 443 P~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~r~~-~--~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~ 514 (1050)
T TIGR02468 443 PHDGDM-----DGETEGNEEHPAKPDPPIWSEIMRFF-T--NPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLT 514 (1050)
T ss_pred CCCccc-----cchhcccccccccccchhhHHHHhhc-c--cCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCCCEE
Confidence 853210 000000 00001112233332 2 2466899999999999999999999999853 3555
Q ss_pred EEEEeCCch---------hHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc----CEEEeCCCCCCCcHHHHHHHH
Q 007224 435 IIVLGTGKK---------PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMR 499 (612)
Q Consensus 435 lvivG~g~~---------~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~a----di~l~pS~~E~~gl~~lEAma 499 (612)
+|+|.++. .+...++++..+++ +++.+.+..+.+.+..+|+.| |+||+||.+|+||++++|||+
T Consensus 515 -LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMA 593 (1050)
T TIGR02468 515 -LIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAA 593 (1050)
T ss_pred -EEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHH
Confidence 45676542 12345666777665 456555555677888899887 699999999999999999999
Q ss_pred cCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHH
Q 007224 500 YGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPA 577 (612)
Q Consensus 500 ~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a 577 (612)
||+|||+|+.||+.|++.++.+|+++ +|.|+++++++|.+++++ ++.+.+|++++. .+.|||+.++
T Consensus 594 cGlPVVASdvGG~~EII~~g~nGlLV----------dP~D~eaLA~AL~~LL~D--pelr~~m~~~gr~~v~~FSWe~ia 661 (1050)
T TIGR02468 594 HGLPMVATKNGGPVDIHRVLDNGLLV----------DPHDQQAIADALLKLVAD--KQLWAECRQNGLKNIHLFSWPEHC 661 (1050)
T ss_pred hCCCEEEeCCCCcHHHhccCCcEEEE----------CCCCHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHCCHHHHH
Confidence 99999999999999999999999988 999999999999999998 677777777663 4679999999
Q ss_pred HHHHHHHHHHHHc
Q 007224 578 KKWEETLLNLEVA 590 (612)
Q Consensus 578 ~~~~~~y~~l~~~ 590 (612)
++|++.|..+...
T Consensus 662 ~~yl~~i~~~~~~ 674 (1050)
T TIGR02468 662 KTYLSRIASCRPR 674 (1050)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999988644
No 11
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=100.00 E-value=5.6e-39 Score=346.16 Aligned_cols=364 Identities=19% Similarity=0.238 Sum_probs=259.6
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..|.|. .||.++++..|+++|+++||+|+|+|+.++..... ....+|++++
T Consensus 1 kI~~v~~~~~p~--~GG~e~~~~~la~~L~~~G~~V~v~~~~~~~~~~~---------------------~~~~~~i~v~ 57 (398)
T cd03796 1 RICMVSDFFYPN--LGGVETHIYQLSQCLIKRGHKVVVITHAYGNRVGI---------------------RYLTNGLKVY 57 (398)
T ss_pred CeeEEeeccccc--cccHHHHHHHHHHHHHHcCCeeEEEeccCCcCCCc---------------------ccccCceeEE
Confidence 799999999996 89999999999999999999999999864321110 0112355555
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH-
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP- 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~- 244 (612)
.+........ ..+ . .+......+.+.+++ .+|| |||+|++...+..
T Consensus 58 ~~p~~~~~~~-------~~~---------~----~~~~~~~~l~~~~~~------------~~~D-iIh~~~~~~~~~~~ 104 (398)
T cd03796 58 YLPFVVFYNQ-------STL---------P----TFFGTFPLLRNILIR------------ERIT-IVHGHQAFSALAHE 104 (398)
T ss_pred EecceeccCC-------ccc---------c----chhhhHHHHHHHHHh------------cCCC-EEEECCCCchHHHH
Confidence 4432111000 000 0 011111222222222 2699 9999987655432
Q ss_pred -HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 245 -CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 245 -~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
.++... .++|+|++.|+... ..+. .. .....+++..++.+|.+++
T Consensus 105 ~~~~~~~-------~~~~~v~t~h~~~~-----~~~~-----~~-----------------~~~~~~~~~~~~~~d~ii~ 150 (398)
T cd03796 105 ALLHART-------MGLKTVFTDHSLFG-----FADA-----SS-----------------IHTNKLLRFSLADVDHVIC 150 (398)
T ss_pred HHHHhhh-------cCCcEEEEeccccc-----ccch-----hh-----------------HHhhHHHHHhhccCCEEEE
Confidence 222222 57899999996421 0000 00 0011344556789999999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
+|+...+.+.. ..+.+.+ ++.+||||+|.+.|.|...+ .+++.
T Consensus 151 ~s~~~~~~~~~--~~~~~~~------k~~vi~ngvd~~~f~~~~~~-----------------------------~~~~~ 193 (398)
T cd03796 151 VSHTSKENTVL--RASLDPE------RVSVIPNAVDSSDFTPDPSK-----------------------------RDNDK 193 (398)
T ss_pred ecHhHhhHHHH--HhCCChh------hEEEEcCccCHHHcCCCccc-----------------------------CCCCc
Confidence 99998876542 1344333 89999999999888765321 12356
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcC
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~ad 479 (612)
++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+ ..+.++++..+++ +++.+.+..+.+.+..+++.||
T Consensus 194 ~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad 271 (398)
T cd03796 194 ITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGP--KRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGH 271 (398)
T ss_pred eEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCc--hHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 899999999999999999999998864 789999999987 4566777777654 4577777777888889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHH-H
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-A 558 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~-~ 558 (612)
++++||..|+||++++|||+||+|||+++.||..|++.++..++ .+.|+++++++|.+++++.... .
T Consensus 272 ~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~~~~~------------~~~~~~~l~~~l~~~l~~~~~~~~ 339 (398)
T cd03796 272 IFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPDMILL------------AEPDVESIVRKLEEAISILRTGKH 339 (398)
T ss_pred EEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCCceee------------cCCCHHHHHHHHHHHHhChhhhhh
Confidence 99999999999999999999999999999999999998775433 3459999999999999873322 2
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 559 LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 559 ~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
..+.+++.+.++|||+.++++|+++|++++..
T Consensus 340 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 340 DPWSFHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 33444555789999999999999999998743
No 12
>PRK10307 putative glycosyl transferase; Provisional
Probab=100.00 E-value=8.4e-39 Score=346.30 Aligned_cols=395 Identities=17% Similarity=0.195 Sum_probs=275.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++|+..|+|. .||++.++..|+++|.++||+|+|+|+.. .++. |.... .........+..+|+++
T Consensus 1 mkIlii~~~~~P~--~~g~~~~~~~l~~~L~~~G~~V~vit~~~-~~~~-~~~~~--------~~~~~~~~~~~~~~i~v 68 (412)
T PRK10307 1 MKILVYGINYAPE--LTGIGKYTGEMAEWLAARGHEVRVITAPP-YYPQ-WRVGE--------GYSAWRYRRESEGGVTV 68 (412)
T ss_pred CeEEEEecCCCCC--ccchhhhHHHHHHHHHHCCCeEEEEecCC-CCCC-CCCCc--------ccccccceeeecCCeEE
Confidence 8999999998886 89999999999999999999999999762 1111 11000 00001112233467887
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHh-hHhhccCCCCCCCCCCCCcEEEEecCCcc--c
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHT--S 241 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~pDvvih~h~~~~--~ 241 (612)
++++....... . .......+..|....... .+.+. .+|| |||+|.+.. .
T Consensus 69 ~r~~~~~~~~~----------~-------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~p~~~~~ 120 (412)
T PRK10307 69 WRCPLYVPKQP----------S-------GLKRLLHLGSFALSSFFPLLAQRR----------WRPD-RVIGVVPTLFCA 120 (412)
T ss_pred EEccccCCCCc----------c-------HHHHHHHHHHHHHHHHHHHhhccC----------CCCC-EEEEeCCcHHHH
Confidence 76642110000 0 000111111122222221 22211 2699 899986442 2
Q ss_pred hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCC-cccccccccccCCCCCcCCcchhHHHHHHHhcCE
Q 007224 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 320 (612)
....++++. .++|+++++|+......+. .+.. ..+ .......+++..++.+|.
T Consensus 121 ~~~~~~~~~-------~~~~~v~~~~d~~~~~~~~------~~~~~~~~-------------~~~~~~~~~~~~~~~ad~ 174 (412)
T PRK10307 121 PGARLLARL-------SGARTWLHIQDYEVDAAFG------LGLLKGGK-------------VARLATAFERSLLRRFDN 174 (412)
T ss_pred HHHHHHHHh-------hCCCEEEEeccCCHHHHHH------hCCccCcH-------------HHHHHHHHHHHHHhhCCE
Confidence 333444443 4789999999644311000 0100 000 000112345667889999
Q ss_pred EEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCC
Q 007224 321 VLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVD 400 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~ 400 (612)
++++|+..++.+.+ ++.+.+ ++.+||||+|.+.|.|.... ....++++++++.
T Consensus 175 ii~~S~~~~~~~~~---~~~~~~------~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~- 227 (412)
T PRK10307 175 VSTISRSMMNKARE---KGVAAE------KVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPD- 227 (412)
T ss_pred EEecCHHHHHHHHH---cCCCcc------cEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCC-
Confidence 99999999999875 555544 89999999999888764211 1334677888763
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCC-CceEEEeccChHHHHHHHHhc
Q 007224 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 401 ~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~-~~i~~~~~~~~~~~~~~l~~a 478 (612)
+.++|+|+||+.++||++.|++|++++.+ ++++|+|+|+|+ .++.++++.++++ .++.+.+..+.+.+.++++.|
T Consensus 228 -~~~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~--~~~~l~~~~~~~~l~~v~f~G~~~~~~~~~~~~~a 304 (412)
T PRK10307 228 -GKKIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGG--GKARLEKMAQCRGLPNVHFLPLQPYDRLPALLKMA 304 (412)
T ss_pred -CCEEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCCh--hHHHHHHHHHHcCCCceEEeCCCCHHHHHHHHHhc
Confidence 45899999999999999999999998865 689999999998 5667777776554 357777766788888999999
Q ss_pred CEEEeCCCCCC----CcHHHHHHHHcCCceEEcCCCC--cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEP----CGLIQLHAMRYGTVPIVASTGG--LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~----~gl~~lEAma~G~PvI~s~~gg--~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
|++++||..|+ +|.+++|||+||+|||+|+.|| +.|++. .+|+++ +++|+++++++|.++++
T Consensus 305 Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~----------~~~d~~~la~~i~~l~~ 372 (412)
T PRK10307 305 DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCV----------EPESVEALVAAIAALAR 372 (412)
T ss_pred CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEe----------CCCCHHHHHHHHHHHHh
Confidence 99999999998 5778999999999999999876 457776 589987 99999999999999998
Q ss_pred hhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+ ++.+.+|++++ +.++|||+.++++|+++|++++.
T Consensus 373 ~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 373 Q--ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred C--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 8 55666666665 46889999999999999999875
No 13
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=100.00 E-value=1.1e-38 Score=348.06 Aligned_cols=391 Identities=19% Similarity=0.197 Sum_probs=257.1
Q ss_pred ccccHHHHhhhhHHHHHhCCC--eEEEEeecCCccc--ccCCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeChhhhh
Q 007224 99 KTGGLGDVLGGLPPALAANGH--RVMTIAPRYDQYK--DAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLA 174 (612)
Q Consensus 99 ~~GG~~~~~~~La~~L~~~Gh--~V~vit~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~ 174 (612)
..||++.++.+|+++|+++|| +|+|+|..++.-. ..+. .......+|++++.++...
T Consensus 24 ~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~----------------~~~~~~~~gv~v~r~~~~~--- 84 (439)
T TIGR02472 24 DTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYA----------------QPIERIAPGARIVRLPFGP--- 84 (439)
T ss_pred CCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccC----------------CCeeEeCCCcEEEEecCCC---
Confidence 489999999999999999997 9999997643210 0000 0112334688887774211
Q ss_pred hhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCC
Q 007224 175 KVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPK 254 (612)
Q Consensus 175 ~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~ 254 (612)
+ .+.. ..+-...+..+...+.+.++... .+|| |||+|+|..+++..+++..
T Consensus 85 ~---------~~~~-----~~~~~~~~~~~~~~l~~~~~~~~----------~~~D-vIH~h~~~~~~~~~~~~~~---- 135 (439)
T TIGR02472 85 R---------RYLR-----KELLWPYLDELADNLLQHLRQQG----------HLPD-LIHAHYADAGYVGARLSRL---- 135 (439)
T ss_pred C---------CCcC-----hhhhhhhHHHHHHHHHHHHHHcC----------CCCC-EEEEcchhHHHHHHHHHHH----
Confidence 0 0100 00001112344455555555431 1599 9999998888877777664
Q ss_pred CCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHc
Q 007224 255 GMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS 334 (612)
Q Consensus 255 ~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~ 334 (612)
.++|+|+|.|+...... ..+...++...... ..+ .......+.+..++.+|.|+++|+........
T Consensus 136 ---~~~p~V~t~H~~~~~~~---~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~ 201 (439)
T TIGR02472 136 ---LGVPLIFTGHSLGREKR---RRLLAAGLKPQQIE-----KQY---NISRRIEAEEETLAHASLVITSTHQEIEEQYA 201 (439)
T ss_pred ---hCCCEEEecccccchhh---hhcccCCCChhhhh-----hhc---chHHHHHHHHHHHHhCCEEEECCHHHHHHHHH
Confidence 47899999996432100 00000010000000 000 00112235667888999999999765444321
Q ss_pred cccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCccc
Q 007224 335 GEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEE 414 (612)
Q Consensus 335 ~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~ 414 (612)
. ..+++.+ ++.+||||+|++.|.|.... ......+..+ ++++.+ ++.++|+|+||+.+
T Consensus 202 ~-~~~~~~~------ki~vIpnGvd~~~f~~~~~~------------~~~~~~~~~~-~~~~~~--~~~~~i~~vGrl~~ 259 (439)
T TIGR02472 202 L-YDSYQPE------RMQVIPPGVDLSRFYPPQSS------------EETSEIDNLL-APFLKD--PEKPPILAISRPDR 259 (439)
T ss_pred h-ccCCCcc------ceEEECCCcChhhcCCCCcc------------ccchhHHHHH-Hhhccc--cCCcEEEEEcCCcc
Confidence 0 1244444 89999999999999775321 0001112222 233333 34579999999999
Q ss_pred ccCHHHHHHHHHhccc--CCcEEE-EEeCCch--hH-------HHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc--
Q 007224 415 QKGSDILAAAIPHFIK--ENVQII-VLGTGKK--PM-------EKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA-- 478 (612)
Q Consensus 415 ~Kg~d~ll~a~~~l~~--~~~~lv-ivG~g~~--~~-------~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~a-- 478 (612)
.||++.|++|+.++.. .+.+++ |+|+|+. .+ .+.+.++..+++ +++.+.+..+.+++..+|+.|
T Consensus 260 ~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~~ 339 (439)
T TIGR02472 260 RKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAAR 339 (439)
T ss_pred cCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHhh
Confidence 9999999999986532 234444 5677652 11 122344444433 456655555677888899877
Q ss_pred --CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH
Q 007224 479 --DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 479 --di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~ 556 (612)
|++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+|+++ ++.|+++++++|.+++++ +
T Consensus 340 ~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~ 407 (439)
T TIGR02472 340 SRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLV----------DVLDLEAIASALEDALSD--S 407 (439)
T ss_pred cCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 99999999999999999999999999999999999999999999987 999999999999999998 5
Q ss_pred HHHHHHHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 557 QALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 557 ~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
..+.+|++++ +.++|||+.++++|+++++
T Consensus 408 ~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 408 SQWQLWSRNGIEGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 5566666655 5789999999999999863
No 14
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=100.00 E-value=8.7e-39 Score=345.11 Aligned_cols=386 Identities=19% Similarity=0.263 Sum_probs=273.8
Q ss_pred EEEEeccccCcc-----ccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecC
Q 007224 87 ILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 87 Il~v~~~~~P~~-----~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
|++++....|+. ..||++.++.+|+++|.++||+|+|+|+........ .....+|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~GG~e~~v~~la~~L~~~G~~V~v~~~~~~~~~~~--------------------~~~~~~~ 60 (405)
T TIGR03449 1 VAMISMHTSPLQQPGTGDAGGMNVYILETATELARRGIEVDIFTRATRPSQPP--------------------VVEVAPG 60 (405)
T ss_pred CeEEeccCCccccCCCcCCCCceehHHHHHHHHhhCCCEEEEEecccCCCCCC--------------------ccccCCC
Confidence 466776666652 259999999999999999999999999763211100 0112356
Q ss_pred ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhH-HHHHHHHHHH-HhhHhhccCCCCCCCCCCCCcEEEEecCCc
Q 007224 162 VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQL-RFSLLCQAAL-EAPRILNLNSNKYFSGPYGEDVVFVANDWH 239 (612)
Q Consensus 162 v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~pDvvih~h~~~ 239 (612)
++++.+....+... ...... .+..|....+ ..++.. ..+|| |||+|+|.
T Consensus 61 ~~v~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~D-iih~h~~~ 111 (405)
T TIGR03449 61 VRVRNVVAGPYEGL------------------DKEDLPTQLCAFTGGVLRAEARHE----------PGYYD-LIHSHYWL 111 (405)
T ss_pred cEEEEecCCCcccC------------------CHHHHHHHHHHHHHHHHHHHhhcc----------CCCCC-eEEechHH
Confidence 66665532111100 000011 1111222222 222221 12699 89999988
Q ss_pred cchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcC
Q 007224 240 TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 240 ~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad 319 (612)
.++++.+++.. .++|+|+++|+...... ..+..... +.......+.+..+..+|
T Consensus 112 ~~~~~~~~~~~-------~~~p~v~t~h~~~~~~~---~~~~~~~~----------------~~~~~~~~~e~~~~~~~d 165 (405)
T TIGR03449 112 SGQVGWLLRDR-------WGVPLVHTAHTLAAVKN---AALADGDT----------------PEPEARRIGEQQLVDNAD 165 (405)
T ss_pred HHHHHHHHHHh-------cCCCEEEeccchHHHHH---HhccCCCC----------------CchHHHHHHHHHHHHhcC
Confidence 87777666654 47899999996532100 00000000 000011123356788999
Q ss_pred EEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 320 MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 320 ~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
.++++|+...+.+.. .++.+.+ ++.+|+||+|.+.|.|.+ +...+.+++++.
T Consensus 166 ~vi~~s~~~~~~~~~--~~~~~~~------ki~vi~ngvd~~~~~~~~--------------------~~~~~~~~~~~~ 217 (405)
T TIGR03449 166 RLIANTDEEARDLVR--HYDADPD------RIDVVAPGADLERFRPGD--------------------RATERARLGLPL 217 (405)
T ss_pred eEEECCHHHHHHHHH--HcCCChh------hEEEECCCcCHHHcCCCc--------------------HHHHHHhcCCCC
Confidence 999999998888764 2455433 899999999998886542 344567778763
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC--cEEEEEeCCc--h-hHHHHHHHHHHHCC--CceEEEeccChHH
Q 007224 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN--VQIIVLGTGK--K-PMEKQLEQLEILYP--EKARGVAKFNIPL 470 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~--~~lvivG~g~--~-~~~~~l~~l~~~~~--~~i~~~~~~~~~~ 470 (612)
+.++|+|+||+.++||++.+++|++++.+ ++ ++|+|+|.+. . ...+.++++.++.+ .++.+.+..+.+.
T Consensus 218 --~~~~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~ 295 (405)
T TIGR03449 218 --DTKVVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIADRVRFLPPRPPEE 295 (405)
T ss_pred --CCcEEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCceEEECCCCCHHH
Confidence 45899999999999999999999999855 44 9999999632 1 34566777777665 3577776667788
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
+..+|+.||++++||..|+||++++|||++|+|||+++.||..|++.++.+|+++ +++|+++++++|.++
T Consensus 296 ~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~la~~i~~~ 365 (405)
T TIGR03449 296 LVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLV----------DGHDPADWADALARL 365 (405)
T ss_pred HHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEEC----------CCCCHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999987 899999999999999
Q ss_pred HHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHH
Q 007224 551 LATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+++ ++.+.+|++++. .++|||+.++++|+++|++++.
T Consensus 366 l~~--~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~~~ 404 (405)
T TIGR03449 366 LDD--PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDALA 404 (405)
T ss_pred HhC--HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 987 566666666653 4789999999999999998763
No 15
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=100.00 E-value=1.7e-38 Score=340.39 Aligned_cols=373 Identities=22% Similarity=0.297 Sum_probs=267.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++|+..|+|. ..||.+.++..|+++|.++ |+|+|++...+.. ..+|+++
T Consensus 1 mkI~~i~~~~~p~-~~GG~~~~v~~l~~~l~~~-~~v~v~~~~~~~~--------------------------~~~~~~~ 52 (388)
T TIGR02149 1 MKVTVLTREYPPN-VYGGAGVHVEELTRELARL-MDVDVRCFGDQRF--------------------------DSEGLTV 52 (388)
T ss_pred CeeEEEecccCcc-ccccHhHHHHHHHHHHHHh-cCeeEEcCCCchh--------------------------cCCCeEE
Confidence 8999999998875 4599999999999999987 8888887652210 1123444
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.+..+..... +... +..+...+. .... ..++| |||+|+|..++.+
T Consensus 53 ~~~~~~~~~~~------------------~~~~---~~~~~~~~~---~~~~---------~~~~d-ivh~~~~~~~~~~ 98 (388)
T TIGR02149 53 KGYRPWSELKE------------------ANKA---LGTFSVDLA---MAND---------PVDAD-VVHSHTWYTFLAG 98 (388)
T ss_pred EEecChhhccc------------------hhhh---hhhhhHHHH---HhhC---------CCCCC-eEeecchhhhhHH
Confidence 33321110000 0000 001111111 1111 12689 9999998877666
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.+++.. .++|+++++|+......+... ..+ .++ .....+.+..+..+|.++++
T Consensus 99 ~~~~~~-------~~~p~v~~~h~~~~~~~~~~~---~~~------------~~~-----~~~~~~~~~~~~~ad~vi~~ 151 (388)
T TIGR02149 99 HLAKKL-------YDKPLVVTAHSLEPLRPWKEE---QLG------------GGY-----KLSSWAEKTAIEAADRVIAV 151 (388)
T ss_pred HHHHHh-------cCCCEEEEeeccccccccccc---ccc------------cch-----hHHHHHHHHHHhhCCEEEEc
Confidence 655543 589999999975432111000 000 000 01123456678899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+.+.+ .++... ++.+||||+|.+.|.|.. ...++++++++ ++.+
T Consensus 152 S~~~~~~~~~~~-~~~~~~------~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~--~~~~ 202 (388)
T TIGR02149 152 SGGMREDILKYY-PDLDPE------KVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGID--RSRP 202 (388)
T ss_pred cHHHHHHHHHHc-CCCCcc------eEEEecCCCChhhcCCCc--------------------hHHHHHHhCCC--CCce
Confidence 999999887521 133333 799999999998887642 44567888876 3558
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc--hhHHHHHHHHHHHCCC---ceEEEe-ccChHHHHHHHHhc
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPE---KARGVA-KFNIPLAHMIIAGA 478 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~---~i~~~~-~~~~~~~~~~l~~a 478 (612)
+|+|+||+.+.||++.++++++++. ++++++++|.|. ..+.+.++++..+++. ++.+.. ..+.+.+..+|+.|
T Consensus 203 ~i~~~Grl~~~Kg~~~li~a~~~l~-~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~a 281 (388)
T TIGR02149 203 YILFVGRITRQKGVPHLLDAVHYIP-KDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNA 281 (388)
T ss_pred EEEEEcccccccCHHHHHHHHHHHh-hcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHHhC
Confidence 9999999999999999999999984 578999988765 3345666666555442 355544 35677888999999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCH------HHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDV------AAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~------~~la~~l~~ll~ 552 (612)
|++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ ++.|+ ++++++|.++++
T Consensus 282 Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~~~~~~~l~~~i~~l~~ 351 (388)
T TIGR02149 282 EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLV----------PPDNSDADGFQAELAKAINILLA 351 (388)
T ss_pred CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEc----------CCCCCcccchHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987 77787 999999999999
Q ss_pred hhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 553 ~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+ ++.+.+|++++ ..++|||+.+++++.++|++++
T Consensus 352 ~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~~ 388 (388)
T TIGR02149 352 D--PELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKVL 388 (388)
T ss_pred C--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 8 66666776665 4688999999999999999763
No 16
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=100.00 E-value=2.1e-38 Score=348.30 Aligned_cols=375 Identities=18% Similarity=0.232 Sum_probs=264.9
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecC
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
+++|||+++.... |....||.+.++.+|+++|.++||+|+++++..+. .+. ..|
T Consensus 56 ~~~mrI~~~~~~~-~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~-~~~------------------------~~g 109 (465)
T PLN02871 56 SRPRRIALFVEPS-PFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGV-PQE------------------------FHG 109 (465)
T ss_pred CCCceEEEEECCc-CCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCC-Ccc------------------------ccC
Confidence 6789999998543 33458999999999999999999999999986321 111 012
Q ss_pred ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc
Q 007224 162 VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 241 (612)
Q Consensus 162 v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~ 241 (612)
+.++.+... .. ..|.. ....+. +...+.+.++.. +|| |||+|.....
T Consensus 110 ~~v~~~~~~--~~---------~~~~~--------~~~~~~-~~~~l~~~i~~~------------kpD-iIh~~~~~~~ 156 (465)
T PLN02871 110 AKVIGSWSF--PC---------PFYQK--------VPLSLA-LSPRIISEVARF------------KPD-LIHASSPGIM 156 (465)
T ss_pred ceeeccCCc--CC---------ccCCC--------ceeecc-CCHHHHHHHHhC------------CCC-EEEECCCchh
Confidence 222111000 00 00000 000000 011222333332 699 9999974332
Q ss_pred h-HHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCE
Q 007224 242 L-IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 242 ~-~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 320 (612)
. ....+... .++|+|++.|+..... .+ ..... ......+.+++...+.+|.
T Consensus 157 ~~~~~~~ak~-------~~ip~V~~~h~~~~~~-~~-----~~~~~---------------~~~~~~~~~~r~~~~~ad~ 208 (465)
T PLN02871 157 VFGALFYAKL-------LCVPLVMSYHTHVPVY-IP-----RYTFS---------------WLVKPMWDIIRFLHRAADL 208 (465)
T ss_pred HHHHHHHHHH-------hCCCEEEEEecCchhh-hh-----cccch---------------hhHHHHHHHHHHHHhhCCE
Confidence 2 22223332 4889999999642100 00 00000 0001122345667789999
Q ss_pred EEecCHHHHHHHHccccCCc-cchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 321 VLTVSPHYAQELVSGEDKGV-ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 321 vi~vS~~~~~~l~~~~~~g~-~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
++++|+..++.+.+ .+. +.+ ++.+|+||+|.+.|.|... ...++.++...
T Consensus 209 ii~~S~~~~~~l~~---~~~~~~~------kv~vi~nGvd~~~f~p~~~-------------------~~~~~~~~~~~- 259 (465)
T PLN02871 209 TLVTSPALGKELEA---AGVTAAN------RIRVWNKGVDSESFHPRFR-------------------SEEMRARLSGG- 259 (465)
T ss_pred EEECCHHHHHHHHH---cCCCCcC------eEEEeCCccCccccCCccc-------------------cHHHHHHhcCC-
Confidence 99999999999886 332 222 7999999999998877532 12234444321
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
.++.++|+|+||+.++||++.++++++++ ++++|+|+|+|+ +++.++++..+. ++.+.+..+.+++..+|+.||
T Consensus 260 ~~~~~~i~~vGrl~~~K~~~~li~a~~~~--~~~~l~ivG~G~--~~~~l~~~~~~~--~V~f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 260 EPEKPLIVYVGRLGAEKNLDFLKRVMERL--PGARLAFVGDGP--YREELEKMFAGT--PTVFTGMLQGDELSQAYASGD 333 (465)
T ss_pred CCCCeEEEEeCCCchhhhHHHHHHHHHhC--CCcEEEEEeCCh--HHHHHHHHhccC--CeEEeccCCHHHHHHHHHHCC
Confidence 12568999999999999999999999988 589999999987 567777777654 477777777788889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec---CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~---g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~ 556 (612)
++|+||..|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ +++|+++++++|.+++++ +
T Consensus 334 v~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv----------~~~d~~~la~~i~~ll~~--~ 401 (465)
T PLN02871 334 VFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLY----------TPGDVDDCVEKLETLLAD--P 401 (465)
T ss_pred EEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 999999999999999999999999999999999999999 9999988 999999999999999998 6
Q ss_pred HHHHHHHHHHH--HhcCCcHHHHHHHHH-HHHHHHHc
Q 007224 557 QALAEMMKNGM--AQDLSWKGPAKKWEE-TLLNLEVA 590 (612)
Q Consensus 557 ~~~~~~~~~~~--~~~~sw~~~a~~~~~-~y~~l~~~ 590 (612)
+.+.+|++++. .++|||+.+++++++ +|+++...
T Consensus 402 ~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~ 438 (465)
T PLN02871 402 ELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWF 438 (465)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 66677776663 478999999999998 79988754
No 17
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=100.00 E-value=1.4e-37 Score=332.88 Aligned_cols=361 Identities=16% Similarity=0.261 Sum_probs=262.4
Q ss_pred eEEEEeccccCcc--ccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007224 86 NILFVGTEVAPWS--KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 86 kIl~v~~~~~P~~--~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
||+|++++-.|.+ ..||++++++++++.|+. +|+++|-..+.+++. ....+|+.
T Consensus 4 ~~~~~~~~~~~~p~~~~g~ve~~~~~~~~~l~~---~~~~~~~~~~~~~~~---------------------~~~~~~~~ 59 (380)
T PRK15484 4 KIIFTVTPIFSIPPRGAAAVETWIYQVAKRTSI---PNRIACIKNPGYPEY---------------------TKVNDNCD 59 (380)
T ss_pred eEEEEeccCCCCCCccccHHHHHHHHhhhhccC---CeeEEEecCCCCCch---------------------hhccCCCc
Confidence 8999998755443 589999999999999943 999999886654442 01224566
Q ss_pred EEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchH
Q 007224 164 RVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~ 243 (612)
++++..+..+.+ .. .+.+. . ....+.+.+...+..... .++| |||+|+... +.
T Consensus 60 ~~~~~~~~~~~~-~~----~~~~~--------~---~~~~~~~~~~~~~~~~~~---------~~~~-vi~v~~~~~-~~ 112 (380)
T PRK15484 60 IHYIGFSRIYKR-LF----QKWTR--------L---DPLPYSQRILNIAHKFTI---------TKDS-VIVIHNSMK-LY 112 (380)
T ss_pred eEEEEeccccch-hh----hhhhc--------c---CchhHHHHHHHHHHhcCC---------CCCc-EEEEeCcHH-hH
Confidence 666632221111 00 00000 0 112233334443333211 1477 999997332 22
Q ss_pred HHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
.. ++.. +.++|+++++|+... ...+..++.+++
T Consensus 113 ~~-~~~~------~~~~~~v~~~h~~~~----------------------------------------~~~~~~~~~ii~ 145 (380)
T PRK15484 113 RQ-IRER------APQAKLVMHMHNAFE----------------------------------------PELLDKNAKIIV 145 (380)
T ss_pred HH-HHhh------CCCCCEEEEEecccC----------------------------------------hhHhccCCEEEE
Confidence 22 2222 267899999995311 112346799999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
+|++.++.+.+. .+ ..++.+||||+|...|.+.. ...++++++++. +.
T Consensus 146 ~S~~~~~~~~~~----~~------~~~i~vIpngvd~~~~~~~~--------------------~~~~~~~~~~~~--~~ 193 (380)
T PRK15484 146 PSQFLKKFYEER----LP------NADISIVPNGFCLETYQSNP--------------------QPNLRQQLNISP--DE 193 (380)
T ss_pred cCHHHHHHHHhh----CC------CCCEEEecCCCCHHHcCCcc--------------------hHHHHHHhCCCC--CC
Confidence 999999988751 12 22789999999988886642 334567778753 44
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCc-------hhHHHHHHHHHHHCCCceEEEeccChHHHHHH
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-------KPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 474 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~-------~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~ 474 (612)
++|+|+||+.+.||++.|++|+.++.+ ++++|+|+|+|. ..+.+.++++..+++.++.+.+..+.+.+..+
T Consensus 194 ~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~v~~~G~~~~~~l~~~ 273 (380)
T PRK15484 194 TVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDRCIMLGGQPPEKMHNY 273 (380)
T ss_pred eEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCcEEEeCCCCHHHHHHH
Confidence 789999999999999999999999865 789999999874 23566777787777777877777778888899
Q ss_pred HHhcCEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 475 IAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 475 l~~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|+.||++++||.+ |+||++++|||+||+|||+|+.||+.|++.++.+|+++ +++.|+++++++|.+++++
T Consensus 274 ~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l---------~~~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 274 YPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHL---------AEPMTSDSIISDINRTLAD 344 (380)
T ss_pred HHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEE---------eCCCCHHHHHHHHHHHHcC
Confidence 9999999999986 99999999999999999999999999999999999953 3789999999999999998
Q ss_pred hCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 554 ~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+ +. .+|++++ +.++|||+.++++|+++|++..
T Consensus 345 ~--~~-~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~~~ 379 (380)
T PRK15484 345 P--EL-TQIAEQAKDFVFSKYSWEGVTQRFEEQIHNWF 379 (380)
T ss_pred H--HH-HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhc
Confidence 4 32 4455544 5789999999999999998753
No 18
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=100.00 E-value=5.5e-37 Score=344.02 Aligned_cols=431 Identities=15% Similarity=0.148 Sum_probs=270.7
Q ss_pred CceEEEEecccc----Cc---cccccHHHHhhhhHHHH--------HhCCC----eEEEEeecCCcccccCCccEEEEEE
Q 007224 84 GLNILFVGTEVA----PW---SKTGGLGDVLGGLPPAL--------AANGH----RVMTIAPRYDQYKDAWDTDVVIELK 144 (612)
Q Consensus 84 ~MkIl~v~~~~~----P~---~~~GG~~~~~~~La~~L--------~~~Gh----~V~vit~~~~~~~~~~~~~~~~~~~ 144 (612)
.|||++|+...+ |. ..+||...|+.+|+++| +++|| +|+|+|...+.... .+-....+.
T Consensus 255 ~~rIa~lS~Hg~~~~~~~lG~~DtGGq~vYV~elaraL~~~~~~~La~~G~~v~~~V~I~TR~~~~~~~-~~~~~~~e~- 332 (784)
T TIGR02470 255 VFNVVILSPHGYFGQENVLGLPDTGGQVVYILDQVRALENEMLQRIKLQGLEITPKILIVTRLIPDAEG-TTCNQRLEK- 332 (784)
T ss_pred cceEEEEecccccCCccccCCCCCCCceeHHHHHHHHHHHHHHHHHHhcCCCccceEEEEecCCCCccc-ccccccccc-
Confidence 489999998762 11 13799999999999985 69999 77799987432111 000000000
Q ss_pred eCCeeeEEEEEEeeecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchh--H-HHHHHHHHHHHhhHh-hccCCC
Q 007224 145 VGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQ--L-RFSLLCQAALEAPRI-LNLNSN 220 (612)
Q Consensus 145 ~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~-l~~~~~ 220 (612)
....+|+.++.++.... ..... ..|.... + -...|+..+.+.+.. ...
T Consensus 333 -----------~~~~~~~~I~rvp~g~~----------~~~~~----~~~i~k~~l~p~l~~f~~~~~~~~~~~~~~--- 384 (784)
T TIGR02470 333 -----------VYGTEHAWILRVPFRTE----------NGIIL----RNWISRFEIWPYLETFAEDAEKEILAELQG--- 384 (784)
T ss_pred -----------ccCCCceEEEEecCCCC----------ccccc----ccccCHHHHHHHHHHHHHHHHHHHHHhcCC---
Confidence 00113455554431100 00000 0011111 1 123455555554432 221
Q ss_pred CCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCC
Q 007224 221 KYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYN 300 (612)
Q Consensus 221 ~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 300 (612)
+|| +||+|.|.+++++..++.. .++|.++|.|.+..... .......-.....+.
T Consensus 385 -------~pD-lIHahy~d~glva~lla~~-------lgVP~v~t~HsL~~~K~-~~~g~~~~~~e~~~~---------- 438 (784)
T TIGR02470 385 -------KPD-LIIGNYSDGNLVASLLARK-------LGVTQCTIAHALEKTKY-PDSDIYWQEFEDKYH---------- 438 (784)
T ss_pred -------CCC-EEEECCCchHHHHHHHHHh-------cCCCEEEECCcchhhcc-cccccccccchhHHH----------
Confidence 599 9999999999999888876 59999999997643111 100000000000000
Q ss_pred CCcCCcchhHHHHHHHhcCEEEecCHHHHHH----HH---ccccCCcc-chhh-----hhccCeEEeeCCCccCccCCCC
Q 007224 301 KPVRGRKINWMKAGILESDMVLTVSPHYAQE----LV---SGEDKGVE-LDNI-----IRKTGIKGIVNGMDVQEWNPLT 367 (612)
Q Consensus 301 ~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~----l~---~~~~~g~~-~~~~-----~~~~~i~vI~Ngvd~~~~~p~~ 367 (612)
....+.-....+..||.|||.|...... +. +...+..+ +-.+ ....++.+||+|+|...|.|.+
T Consensus 439 ---~~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~qY~s~~~ft~p~Ly~vvnGid~~~~Ki~VVpPGVD~~iF~P~~ 515 (784)
T TIGR02470 439 ---FSCQFTADLIAMNAADFIITSTYQEIAGTKDSVGQYESHQAFTMPGLYRVVHGIDVFDPKFNIVSPGADESIYFPYS 515 (784)
T ss_pred ---hhhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhhhhhhcccccccceeeeecCccCCcCCeEEECCCcChhhcCCCC
Confidence 0001111335677899999999755332 11 10001110 0000 0123889999999999887754
Q ss_pred ccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCch--
Q 007224 368 DKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-- 443 (612)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~-- 443 (612)
.+.-... ....-.+....++.+.++.+|+..++++++|+++||++++||++.|++|+.++.. ++++|+|+|++..
T Consensus 516 ~~~~r~~-~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~ 594 (784)
T TIGR02470 516 DKEKRLT-NLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAK 594 (784)
T ss_pred chhhhhh-hhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccc
Confidence 2100000 0000000111234566788898767788999999999999999999999987743 5799999998642
Q ss_pred --------hHHHHHHHHHHHCC--CceEEEecc-ChHHHHHHHH----hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 444 --------PMEKQLEQLEILYP--EKARGVAKF-NIPLAHMIIA----GADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 444 --------~~~~~l~~l~~~~~--~~i~~~~~~-~~~~~~~~l~----~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.+.+.+.+++.+++ +++.+.+.. +.....++++ .+|++++||++|+||++++|||+||+|||+|+
T Consensus 595 ~s~d~ee~~~i~~L~~la~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~ 674 (784)
T TIGR02470 595 ESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATR 674 (784)
T ss_pred cccchhHHHHHHHHHHHHHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcC
Confidence 13456677777775 456655532 2333333443 46899999999999999999999999999999
Q ss_pred CCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh--hCHHHHHHHHHHHH---HhcCCcHHHHHHHHHH
Q 007224 509 TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNGM---AQDLSWKGPAKKWEET 583 (612)
Q Consensus 509 ~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~--~~~~~~~~~~~~~~---~~~~sw~~~a~~~~~~ 583 (612)
+||+.|+|.++.+|+++ +|.|+++++++|.++++. .+++.+.+++++++ .++|||+.++++++++
T Consensus 675 ~GG~~EiV~dg~tGfLV----------dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l 744 (784)
T TIGR02470 675 FGGPLEIIQDGVSGFHI----------DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTL 744 (784)
T ss_pred CCCHHHHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999988 999999999999998741 12677777877764 5899999999999988
Q ss_pred H
Q 007224 584 L 584 (612)
Q Consensus 584 y 584 (612)
.
T Consensus 745 ~ 745 (784)
T TIGR02470 745 A 745 (784)
T ss_pred H
Confidence 6
No 19
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=9.6e-37 Score=324.26 Aligned_cols=365 Identities=23% Similarity=0.231 Sum_probs=259.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++ +|. .||.+.++..|+++|+++||+|++++...+...... ..++.+
T Consensus 1 mki~~~~---~p~--~gG~~~~~~~la~~L~~~G~~v~v~~~~~~~~~~~~-----------------------~~~~~~ 52 (371)
T cd04962 1 MKIGIVC---YPT--YGGSGVVATELGKALARRGHEVHFITSSRPFRLDEY-----------------------SPNIFF 52 (371)
T ss_pred CceeEEE---EeC--CCCccchHHHHHHHHHhcCCceEEEecCCCcchhhh-----------------------ccCeEE
Confidence 8999997 353 799999999999999999999999997532111100 011111
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.++.+.+... . ... | .......+.+.++. ++|| |||+|.+.....+
T Consensus 53 ~~~~~~~~~~~-~-----~~~--------~------~~~~~~~l~~~i~~------------~~~d-ivh~~~~~~~~~~ 99 (371)
T cd04962 53 HEVEVPQYPLF-Q-----YPP--------Y------DLALASKIAEVAKR------------YKLD-LLHVHYAVPHAVA 99 (371)
T ss_pred EEecccccchh-h-----cch--------h------HHHHHHHHHHHHhc------------CCcc-EEeecccCCccHH
Confidence 11111100000 0 000 0 01122333344433 3799 9999976654444
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.++...... ..++|+++++|+..... .+.. .....+.+..++.+|.++++
T Consensus 100 ~~~~~~~~~---~~~~~~i~~~h~~~~~~---------~~~~------------------~~~~~~~~~~~~~~d~ii~~ 149 (371)
T cd04962 100 AYLAREILG---KKDLPVVTTLHGTDITL---------VGQD------------------PSFQPATRFSIEKSDGVTAV 149 (371)
T ss_pred HHHHHHhcC---cCCCcEEEEEcCCcccc---------cccc------------------ccchHHHHHHHhhCCEEEEc
Confidence 444332211 03789999999643210 0000 01223556778899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+... ++ . ..++.+||||+|...+.+.. +...+++++++. +.+
T Consensus 150 s~~~~~~~~~~--~~-~------~~~i~vi~n~~~~~~~~~~~--------------------~~~~~~~~~~~~--~~~ 198 (371)
T cd04962 150 SESLRQETYEL--FD-I------TKEIEVIPNFVDEDRFRPKP--------------------DEALKRRLGAPE--GEK 198 (371)
T ss_pred CHHHHHHHHHh--cC-C------cCCEEEecCCcCHhhcCCCc--------------------hHHHHHhcCCCC--CCe
Confidence 99999988752 21 1 22799999999988776542 233456667653 458
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCEE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
+++++||+.+.||++.+++++.++.+ .+++|+++|+|. ..+.++++..+.+ +++.+.+. . +.+..+|+.||++
T Consensus 199 ~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~-~-~~~~~~~~~~d~~ 274 (371)
T cd04962 199 VLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGP--ERSPAERLARELGLQDDVLFLGK-Q-DHVEELLSIADLF 274 (371)
T ss_pred EEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCc--CHHHHHHHHHHcCCCceEEEecC-c-ccHHHHHHhcCEE
Confidence 89999999999999999999999866 579999999987 3455666666554 34665553 2 3467899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
++||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ ++.|++++++++.+++++ ++.+.+
T Consensus 275 v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~ 342 (371)
T cd04962 275 LLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLV----------DVGDVEAMAEYALSLLED--DELWQE 342 (371)
T ss_pred EeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEc----------CCCCHHHHHHHHHHHHhC--HHHHHH
Confidence 99999999999999999999999999999999999999999987 899999999999999987 666666
Q ss_pred HHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 562 MMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 562 ~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
|++++ +.++|||+.++++|.++|+++
T Consensus 343 ~~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 343 FSRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 66655 468999999999999999864
No 20
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=100.00 E-value=3.3e-36 Score=324.76 Aligned_cols=276 Identities=21% Similarity=0.238 Sum_probs=220.6
Q ss_pred CCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 227 YGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 227 ~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
.++| +||+|.++.+.....++.... .+.++++++|+...... .....
T Consensus 117 ~~~d-iihaH~~~~~~~~~~~~~~~~-----~~~~~~~t~Hg~d~~~~---------------------------~~~~~ 163 (406)
T PRK15427 117 FVAD-VFIAHFGPAGVTAAKLRELGV-----LRGKIATIFHGIDISSR---------------------------EVLNH 163 (406)
T ss_pred CCCC-EEEEcCChHHHHHHHHHHhCC-----CCCCeEEEEcccccccc---------------------------hhhhh
Confidence 3699 999998887776666654211 23467889996432100 00001
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHH
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 386 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 386 (612)
...+++..++.+|.++++|+..++.+.+ +|++.+ ++.+||||+|.+.|.+....
T Consensus 164 ~~~~~~~~~~~ad~vv~~S~~~~~~l~~---~g~~~~------ki~vi~nGvd~~~f~~~~~~----------------- 217 (406)
T PRK15427 164 YTPEYQQLFRRGDLMLPISDLWAGRLQK---MGCPPE------KIAVSRMGVDMTRFSPRPVK----------------- 217 (406)
T ss_pred hhHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCHH------HEEEcCCCCCHHHcCCCccc-----------------
Confidence 1234566788999999999999999986 576655 89999999999988654211
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEE
Q 007224 387 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 462 (612)
Q Consensus 387 ~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~ 462 (612)
..++...|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+ .++.++++.++++ +++.+
T Consensus 218 ------------~~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~--~~~~l~~~~~~~~l~~~V~~ 283 (406)
T PRK15427 218 ------------APATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP--WERRLRTLIEQYQLEDVVEM 283 (406)
T ss_pred ------------cCCCCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch--hHHHHHHHHHHcCCCCeEEE
Confidence 01234679999999999999999999999975 689999999998 5677888877765 45777
Q ss_pred EeccChHHHHHHHHhcCEEEeCCCC------CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCC
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~ 536 (612)
.+..+.+++.++|+.||++++||.. ||+|++++|||+||+|||+|+.||+.|++.++.+|+++ +
T Consensus 284 ~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv----------~ 353 (406)
T PRK15427 284 PGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV----------P 353 (406)
T ss_pred eCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe----------C
Confidence 7777788888999999999999974 99999999999999999999999999999999999987 9
Q ss_pred CCCHHHHHHHHHHHHH-hhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 537 PVDVAAVSTTVRRALA-TYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~-~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
++|+++++++|.++++ + ++.+.+|++++ +.++|+|+.+++++.++|+++
T Consensus 354 ~~d~~~la~ai~~l~~~d--~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 354 ENDAQALAQRLAAFSQLD--TDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCCHHHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999 7 55566666555 579999999999999999863
No 21
>PLN00142 sucrose synthase
Probab=100.00 E-value=7.7e-36 Score=334.69 Aligned_cols=322 Identities=17% Similarity=0.181 Sum_probs=220.9
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
.|| |||+|.|.+++++..++.. .++|.|+|.|.+.-... ...+..+-.....+. .. ..
T Consensus 408 ~PD-lIHaHYwdsg~vA~~La~~-------lgVP~v~T~HsL~k~K~-~~~~~~~~~~e~~y~------------~~-~r 465 (815)
T PLN00142 408 KPD-LIIGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKY-PDSDIYWKKFDDKYH------------FS-CQ 465 (815)
T ss_pred CCC-EEEECCccHHHHHHHHHHH-------hCCCEEEEcccchhhhc-cccCCcccccchhhh------------hh-hc
Confidence 599 9999999999999999987 49999999997643111 100000000010100 00 11
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHH-------HccccCCcc-chhhh-----hccCeEEeeCCCccCccCCCCcc--ccc
Q 007224 308 INWMKAGILESDMVLTVSPHYAQEL-------VSGEDKGVE-LDNII-----RKTGIKGIVNGMDVQEWNPLTDK--YIG 372 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l-------~~~~~~g~~-~~~~~-----~~~~i~vI~Ngvd~~~~~p~~~~--~~~ 372 (612)
+.-....+..||.||+.|......+ .++..+..+ +..++ ...++.+|++|+|...|.|...+ .+.
T Consensus 466 ~~aE~~a~~~Ad~IIasT~qEi~g~~~~i~qy~sh~~f~~p~L~rvv~GId~~~~ki~VVppGvD~~~F~P~~~~~~rl~ 545 (815)
T PLN00142 466 FTADLIAMNHADFIITSTYQEIAGSKDTVGQYESHTAFTLPGLYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEKQKRLT 545 (815)
T ss_pred hHHHHHHHHhhhHHHhCcHHHHhcccchhhhhhcccccccchhhhhhccccccccCeeEECCCCChhhcCCCChHHhhHH
Confidence 2234557889999999998776422 222112221 01110 02288999999999999875321 000
Q ss_pred cccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCc-h------
Q 007224 373 VKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-K------ 443 (612)
Q Consensus 373 ~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~-~------ 443 (612)
.-++.. +....+....++.+|+..++++++|+++||+.++||++.|++|+.++.+ ++++|+|+|++. .
T Consensus 546 ~l~n~I---~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ 622 (815)
T PLN00142 546 SLHPSI---EELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDR 622 (815)
T ss_pred hhcccc---hhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccH
Confidence 000000 1111123344567787666778999999999999999999999998754 579999999872 1
Q ss_pred hH---HHHHHHHHHHCC--CceEEEeccC----hHHHHHHHH-hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007224 444 PM---EKQLEQLEILYP--EKARGVAKFN----IPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 513 (612)
Q Consensus 444 ~~---~~~l~~l~~~~~--~~i~~~~~~~----~~~~~~~l~-~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 513 (612)
.. .+.+.+++.+++ +++.+.+... .+.+..+++ .+|++++||.+|+||++++|||+||+|||+|+.||+.
T Consensus 623 ee~~el~~L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~ 702 (815)
T PLN00142 623 EEIAEIKKMHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPA 702 (815)
T ss_pred HHHHHHHHHHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHH
Confidence 11 244666777765 4555544322 233444555 5799999999999999999999999999999999999
Q ss_pred cceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh--hCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHH
Q 007224 514 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT--YGTQALAEMMKNG---MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 514 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~--~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y 584 (612)
|+|.+|.+|+++ +|.|+++++++|.++++. .+++.+.+|++++ +.++|||+.++++++++.
T Consensus 703 EIV~dG~tG~LV----------~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 703 EIIVDGVSGFHI----------DPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHhcCCCcEEEe----------CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999988 999999999999887631 1267777888776 457899999999999876
No 22
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=100.00 E-value=4.6e-37 Score=305.11 Aligned_cols=367 Identities=20% Similarity=0.254 Sum_probs=269.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
++|++|+.+|+|. .||++..++.|++.|-+.||.|.+++..|++... +|+. -+|+++
T Consensus 1 ~~i~mVsdff~P~--~ggveshiy~lSq~li~lghkVvvithayg~r~g------------------iryl---t~glkV 57 (426)
T KOG1111|consen 1 SRILMVSDFFYPS--TGGVESHIYALSQCLIRLGHKVVVITHAYGNRVG------------------IRYL---TNGLKV 57 (426)
T ss_pred CcceeeCcccccC--CCChhhhHHHhhcchhhcCCeEEEEeccccCccc------------------eeee---cCCceE
Confidence 5799999999997 9999999999999999999999999999875422 2222 257888
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
|+++-...+.. .|-..+|+. -.+.|. .+..- +-. |||.|...+.+..
T Consensus 58 yylp~~v~~n~----tT~ptv~~~-------~Pllr~---------i~lrE------------~I~-ivhghs~fS~lah 104 (426)
T KOG1111|consen 58 YYLPAVVGYNQ----TTFPTVFSD-------FPLLRP---------ILLRE------------RIE-IVHGHSPFSYLAH 104 (426)
T ss_pred EEEeeeeeecc----cchhhhhcc-------Ccccch---------hhhhh------------ceE-EEecCChHHHHHH
Confidence 88875443332 122223331 011111 11110 245 8999976666554
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
-.+.... ..|.++|||-|+ .|.+.++...- ..+.++..+.+.|++||+
T Consensus 105 e~l~har-----tMGlktVfTdHS-----lfGfad~~si~----------------------~n~ll~~sL~~id~~IcV 152 (426)
T KOG1111|consen 105 EALMHAR-----TMGLKTVFTDHS-----LFGFADIGSIL----------------------TNKLLPLSLANIDRIICV 152 (426)
T ss_pred HHHHHHH-----hcCceEEEeccc-----cccccchhhhh----------------------hcceeeeeecCCCcEEEE
Confidence 4444322 378999999995 33333322111 113344457789999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|..-++...=+ -.++ +.++.+|||.++...|.|.+.. - ...+..
T Consensus 153 shtskentvlr--~~L~------p~kvsvIPnAv~~~~f~P~~~~---------------------------~-~S~~i~ 196 (426)
T KOG1111|consen 153 SHTSKENTVLR--GALA------PAKVSVIPNAVVTHTFTPDAAD---------------------------K-PSADII 196 (426)
T ss_pred eecCCCceEEE--eccC------HhHeeeccceeeccccccCccc---------------------------c-CCCCee
Confidence 99887765521 2233 4499999999999999995321 0 123447
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCch--hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
.|+.++||.++||+|.++++++++.+ ++++|+|+|+|++ .+++.++++.. .+++...+..+.+.+.+.|.+.|+
T Consensus 197 ~ivv~sRLvyrKGiDll~~iIp~vc~~~p~vrfii~GDGPk~i~lee~lEk~~l--~~rV~~lG~v~h~~Vr~vl~~G~I 274 (426)
T KOG1111|consen 197 TIVVASRLVYRKGIDLLLEIIPSVCDKHPEVRFIIIGDGPKRIDLEEMLEKLFL--QDRVVMLGTVPHDRVRDVLVRGDI 274 (426)
T ss_pred EEEEEeeeeeccchHHHHHHHHHHHhcCCCeeEEEecCCcccchHHHHHHHhhc--cCceEEecccchHHHHHHHhcCcE
Confidence 89999999999999999999999987 8999999999994 34555555543 356888888899999999999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
|++||..|+||++++|||+||+|||+++.||++|++.++ .-+ . .+.++++++++++.++...+. ..
T Consensus 275 FlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d-~i~-~----------~~~~~~dl~~~v~~ai~~~~~--~p 340 (426)
T KOG1111|consen 275 FLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED-MIT-L----------GEPGPDDLVGAVEKAITKLRT--LP 340 (426)
T ss_pred EeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc-cee-c----------cCCChHHHHHHHHHHHHHhcc--Cc
Confidence 999999999999999999999999999999999999876 222 2 566899999999999986322 12
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 561 EMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 561 ~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
+...+.+.+.|+|+.++++.+++|.++....
T Consensus 341 ~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 341 LEFHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred hhHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 2334556788999999999999999988654
No 23
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=100.00 E-value=1e-34 Score=312.71 Aligned_cols=378 Identities=18% Similarity=0.183 Sum_probs=250.3
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
|||||+..|++. ...|+++|+++||+|+++|+....... .|++++
T Consensus 1 ~il~~~~~~p~~---------~~~la~~L~~~G~~v~~~~~~~~~~~~--------------------------~~v~~~ 45 (396)
T cd03818 1 RILFVHQNFPGQ---------FRHLAPALAAQGHEVVFLTEPNAAPPP--------------------------GGVRVV 45 (396)
T ss_pred CEEEECCCCchh---------HHHHHHHHHHCCCEEEEEecCCCCCCC--------------------------CCeeEE
Confidence 699999886442 456999999999999999987432111 035555
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+..+..-. . .+.+|...........+++.+.+..+.. ..++|| |||+|.... ...
T Consensus 46 ~~~~~~~~~--------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~pd-vi~~h~~~~--~~~ 101 (396)
T cd03818 46 RYRPPRGPT--------S------GTHPYLREFEEAVLRGQAVARALLALRA-------KGFRPD-VIVAHPGWG--ETL 101 (396)
T ss_pred EecCCCCCC--------C------CCCccchhHHHHHHHHHHHHHHHHHHHh-------cCCCCC-EEEECCccc--hhh
Confidence 443211000 0 1112444444443334444444444321 135799 999996332 233
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
+++... .++|++.++|-... .. . ...+.......... ..........+....+..+|.++++|
T Consensus 102 ~l~~~~------~~~~~v~~~~~~~~-~~-~----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ad~vi~~s 164 (396)
T cd03818 102 FLKDVW------PDAPLIGYFEFYYR-AE-G----ADVGFDPEFPPSLD-----DALRLRNRNALILLALAQADAGVSPT 164 (396)
T ss_pred hHHHhC------CCCCEEEEEeeeec-CC-C----CCCCCCCCCCCchh-----HHHHHHHhhhHhHHHHHhCCEEECCC
Confidence 455443 57888887762110 00 0 00011110000000 00000000111345688999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
++.++.+.+. + ..++.+|+||+|.+.|.|.... ....+...+++ ++.++
T Consensus 165 ~~~~~~~~~~--~---------~~ki~vI~ngvd~~~f~~~~~~------------------~~~~~~~~~~~--~~~~~ 213 (396)
T cd03818 165 RWQRSTFPAE--L---------RSRISVIHDGIDTDRLRPDPQA------------------RLRLPNGRVLT--PGDEV 213 (396)
T ss_pred HHHHhhCcHh--h---------ccceEEeCCCccccccCCCchh------------------hhcccccccCC--CCCeE
Confidence 9999887641 1 1289999999999998775321 11111112222 35579
Q ss_pred EEEEcC-cccccCHHHHHHHHHhccc--CCcEEEEEeCCch-----------hHHHHHHHHHHHC-CCceEEEeccChHH
Q 007224 406 IGFIGR-LEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-----------PMEKQLEQLEILY-PEKARGVAKFNIPL 470 (612)
Q Consensus 406 il~iGr-l~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~-----------~~~~~l~~l~~~~-~~~i~~~~~~~~~~ 470 (612)
|+|+|| ++++||++.+++|+.++.+ ++++|+|+|++.. ..++.++++..+. .+++.+.+..+.+.
T Consensus 214 i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~V~f~G~v~~~~ 293 (396)
T cd03818 214 ITFVARNLEPYRGFHVFMRALPRLLRARPDARVVIVGGDGVSYGAPPPDGESWKQHMLDELGGRLDLSRVHFLGRVPYDQ 293 (396)
T ss_pred EEEECCCcccccCHHHHHHHHHHHHHHCCCcEEEEEcCCCcccCCCCCCcccHHHHHHHHhhcccCcceEEEeCCCCHHH
Confidence 999998 9999999999999999865 7999999997421 1223344444322 24577777778888
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
+..+|+.||++++||..|++|++++|||+||+|||+|+.||+.|++.++.+|+++ ++.|+++++++|.++
T Consensus 294 ~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~~~~G~lv----------~~~d~~~la~~i~~l 363 (396)
T cd03818 294 YLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVREVITDGENGLLV----------DFFDPDALAAAVIEL 363 (396)
T ss_pred HHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCchhhcccCCceEEc----------CCCCHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999999987 999999999999999
Q ss_pred HHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHH
Q 007224 551 LATYGTQALAEMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~ 582 (612)
+++ ++.+.+|++++ +.+.|||+.++++|++
T Consensus 364 l~~--~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 364 LDD--PARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred HhC--HHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 998 55556666555 5678999999999863
No 24
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=100.00 E-value=3.2e-35 Score=313.85 Aligned_cols=358 Identities=18% Similarity=0.194 Sum_probs=247.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC-cccccCCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD-QYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
.||++|...+ ..||+++++..|+..|.+.||++++++.... .+.+ .....|+.
T Consensus 2 ~~il~ii~~~----~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~----------------------~~~~~~i~ 55 (374)
T TIGR03088 2 PLIVHVVYRF----DVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRK----------------------RIQRPDVA 55 (374)
T ss_pred ceEEEEeCCC----CCCcHHHHHHHHHhhccccccceEEEEcCCCChhHH----------------------HHHhcCce
Confidence 4899999774 3699999999999999999999999985421 1111 01113455
Q ss_pred EEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchH
Q 007224 164 RVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~ 243 (612)
++.+.... ...+ .+...+.++++.. +|| |||+|...+. .
T Consensus 56 ~~~~~~~~-----------------------~~~~----~~~~~l~~~l~~~------------~~D-ivh~~~~~~~-~ 94 (374)
T TIGR03088 56 FYALHKQP-----------------------GKDV----AVYPQLYRLLRQL------------RPD-IVHTRNLAAL-E 94 (374)
T ss_pred EEEeCCCC-----------------------CCCh----HHHHHHHHHHHHh------------CCC-EEEEcchhHH-H
Confidence 54432110 0001 1222333444433 699 9999964332 2
Q ss_pred HHHHHHhhcCCCCCCCceE-EEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHH-HHhcCEE
Q 007224 244 PCYLKTMYKPKGMYKSAKV-VFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAG-ILESDMV 321 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~v-v~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~~~ad~v 321 (612)
..++... .+.|+ +++.|....... .+ ......+++.. ...+|.+
T Consensus 95 ~~~~~~~-------~~~~~~i~~~h~~~~~~~----------------------~~-----~~~~~~~~~~~~~~~~~~~ 140 (374)
T TIGR03088 95 AQLPAAL-------AGVPARIHGEHGRDVFDL----------------------DG-----SNWKYRWLRRLYRPLIHHY 140 (374)
T ss_pred HHHHHHh-------cCCCeEEEeecCcccccc----------------------hh-----hHHHHHHHHHHHHhcCCeE
Confidence 2222222 24443 344442211000 00 00112344333 3468999
Q ss_pred EecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCC
Q 007224 322 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~ 401 (612)
+++|+..++.+.+ .++++.+ ++.+|+||+|.+.|.+.... +...+.+...+ +
T Consensus 141 i~vs~~~~~~~~~--~~~~~~~------~~~vi~ngvd~~~~~~~~~~------------------~~~~~~~~~~~--~ 192 (374)
T TIGR03088 141 VAVSRDLEDWLRG--PVKVPPA------KIHQIYNGVDTERFHPSRGD------------------RSPILPPDFFA--D 192 (374)
T ss_pred EEeCHHHHHHHHH--hcCCChh------hEEEeccCccccccCCCccc------------------hhhhhHhhcCC--C
Confidence 9999999998875 2455544 78999999999888765311 11122222222 3
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCchhHHHHHHHHHHHCCC--ceEEEeccChHHHHH
Q 007224 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGKKPMEKQLEQLEILYPE--KARGVAKFNIPLAHM 473 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~~~~~~~l~~l~~~~~~--~i~~~~~~~~~~~~~ 473 (612)
+.++|+++||+.++||++.+++|+.++.+ ++++|+++|+|. ..+.++++..+++. .+.+. +. .+....
T Consensus 193 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~-g~-~~~~~~ 268 (374)
T TIGR03088 193 ESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGP--ARGACEQMVRAAGLAHLVWLP-GE-RDDVPA 268 (374)
T ss_pred CCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEEecCCc--hHHHHHHHHHHcCCcceEEEc-CC-cCCHHH
Confidence 56899999999999999999999998854 278999999987 45667777766652 23332 22 345678
Q ss_pred HHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+++.||++|+||.+|+||++++|||+||+|||+|+.||..|++.++.+|+++ +++|+++++++|.+++++
T Consensus 269 ~~~~adi~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~----------~~~d~~~la~~i~~l~~~ 338 (374)
T TIGR03088 269 LMQALDLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALV----------PPGDAVALARALQPYVSD 338 (374)
T ss_pred HHHhcCEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999987 999999999999999987
Q ss_pred hCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 554 ~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
++.+.++++++ +.++|||+.++++|+++|+++
T Consensus 339 --~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 339 --PAARRAHGAAGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred --HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 55555565554 568999999999999999876
No 25
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=100.00 E-value=7.5e-35 Score=304.87 Aligned_cols=329 Identities=18% Similarity=0.181 Sum_probs=237.7
Q ss_pred ceEEEEeccccC--ccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007224 85 LNILFVGTEVAP--WSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P--~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
|||++|+..+.| ....||.++++..|+.+|.++||+|+++++..+..... .
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~-----------------~---------- 53 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGDSKTAAP-----------------L---------- 53 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCCCCcccc-----------------e----------
Confidence 899999998754 33599999999999999999999999999864321110 0
Q ss_pred eEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccch
Q 007224 163 DRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~ 242 (612)
........... +.............+.+.++. .+|| |||+|.+...+
T Consensus 54 --~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~------------~~~D-ivh~~~~~~~~ 100 (335)
T cd03802 54 --VPVVPEPLRLD------------------APGRDRAEAEALALAERALAA------------GDFD-IVHNHSLHLPL 100 (335)
T ss_pred --eeccCCCcccc------------------cchhhHhhHHHHHHHHHHHhc------------CCCC-EEEecCcccch
Confidence 00000000000 000001111222223333332 2699 99999877766
Q ss_pred HHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEE
Q 007224 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 322 (612)
. . ... .++|+++++|+..... ...........+.++
T Consensus 101 ~--~-~~~-------~~~~~v~~~h~~~~~~----------------------------------~~~~~~~~~~~~~~~ 136 (335)
T cd03802 101 P--F-ARP-------LPVPVVTTLHGPPDPE----------------------------------LLKLYYAARPDVPFV 136 (335)
T ss_pred h--h-hcc-------cCCCEEEEecCCCCcc----------------------------------cchHHHhhCcCCeEE
Confidence 5 2 211 5889999999654310 001233456788999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~ 402 (612)
++|+...+.+.. . .++.+||||+|.+.|.+.. .+
T Consensus 137 ~~s~~~~~~~~~---~----------~~~~vi~ngvd~~~~~~~~---------------------------------~~ 170 (335)
T cd03802 137 SISDAQRRPWPP---L----------PWVATVHNGIDLDDYPFRG---------------------------------PK 170 (335)
T ss_pred EecHHHHhhccc---c----------cccEEecCCcChhhCCCCC---------------------------------CC
Confidence 999998887654 1 2799999999998886531 13
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHH---CCCceEEEeccChHHHHHHHHhcC
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIL---YPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~---~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
...++|+||+.+.||++.+++++.+. +++|+|+|.|.. ...+.....+ ..+++.+.+..+.+.+..+++.+|
T Consensus 171 ~~~i~~~Gr~~~~Kg~~~li~~~~~~---~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d 245 (335)
T cd03802 171 GDYLLFLGRISPEKGPHLAIRAARRA---GIPLKLAGPVSD--PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNAR 245 (335)
T ss_pred CCEEEEEEeeccccCHHHHHHHHHhc---CCeEEEEeCCCC--HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCc
Confidence 46899999999999999999998765 799999999863 2222222222 245688888888888888999999
Q ss_pred EEEeCCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHH
Q 007224 480 FILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA 558 (612)
Q Consensus 480 i~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~ 558 (612)
++++||.+ |+||++++|||+||+|||+++.||..|++.++.+|+++ ++ +++++++|.++++. .
T Consensus 246 ~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~----------~~--~~~l~~~l~~l~~~--~-- 309 (335)
T cd03802 246 ALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLV----------DS--VEELAAAVARADRL--D-- 309 (335)
T ss_pred EEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEe----------CC--HHHHHHHHHHHhcc--H--
Confidence 99999985 99999999999999999999999999999999999987 54 99999999998764 2
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 559 LAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 559 ~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
.+.+++.+.++|||+.++++|+++|+
T Consensus 310 -~~~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 310 -RAACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred -HHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 12344556799999999999999984
No 26
>PRK10125 putative glycosyl transferase; Provisional
Probab=100.00 E-value=6.5e-35 Score=313.94 Aligned_cols=378 Identities=15% Similarity=0.139 Sum_probs=235.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
||||+|...+ ..||+|+.+.+|++.|.++||+|.++..+.+....... .+++..
T Consensus 1 mkil~i~~~l----~~GGaeri~~~L~~~l~~~G~~~~i~~~~~~~~~~~~~----------------------~~~~~~ 54 (405)
T PRK10125 1 MNILQFNVRL----AEGGAAGVALDLHQRALQQGLASHFVYGYGKGGKESVS----------------------HQNYPQ 54 (405)
T ss_pred CeEEEEEeee----cCCchhHHHHHHHHHHHhcCCeEEEEEecCCCcccccc----------------------cCCcce
Confidence 8999999753 47999999999999999999999999987432221000 001111
Q ss_pred EEEeCh-------hhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecC
Q 007224 165 VFVDHP-------WFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND 237 (612)
Q Consensus 165 ~~l~~~-------~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~ 237 (612)
.....+ ....+ .++ ...++ -..+..+.+.. .++|| |||+|.
T Consensus 55 ~~~~~~~~~~~~~~~~~~-~~~---~~~~~----------------~~~~~~~~i~~-----------~~~pD-viHlH~ 102 (405)
T PRK10125 55 VIKHTPRMTAMANIALFR-LFN---RDLFG----------------NFNELYRTITR-----------TPGPV-VLHFHV 102 (405)
T ss_pred EEEecccHHHHHHHHHHH-hcc---hhhcc----------------hHHHHHHHHhh-----------ccCCC-EEEEec
Confidence 111111 00111 000 00000 01111122211 24799 999998
Q ss_pred CccchHHHH--HHH----hhcCCCCCCCceEEEEEecCc-ccccCCcccccccCCCcccccccc---cccCCCCCc----
Q 007224 238 WHTSLIPCY--LKT----MYKPKGMYKSAKVVFCIHNIA-YQGRFAFEDFGLLNLPAQFKSSFD---FIDGYNKPV---- 303 (612)
Q Consensus 238 ~~~~~~~~~--l~~----~~~~~~~~~~~~vv~~iH~~~-~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~---- 303 (612)
.+.+++... ++. .++ ..++|+|+|+|+.+ +.|.+...+ ....+..... ....|....
T Consensus 103 ~~~~~~~~~~l~~~~~~~~~~----~~~~piV~TlHd~~~~tg~c~~~~-----~C~~~~~~c~~Cp~l~~~~~~~~d~~ 173 (405)
T PRK10125 103 LHSYWLNLKSVVRFCEKVKNH----KPDVTLVWTLHDHWSVTGRCAFTD-----GCEGWKTGCQKCPTLNNYPPVKVDRA 173 (405)
T ss_pred ccCceecHHHHHHHHhhhhcc----cCCCCEEEecccccccCCCcCCCc-----ccccccccCCCCCCccCCCCCccchH
Confidence 887544332 211 011 15789999999864 334443211 0001111110 000111100
Q ss_pred ---CCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchh
Q 007224 304 ---RGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV 380 (612)
Q Consensus 304 ---~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~ 380 (612)
+.++....+.....++.++++|++.++.+.+. ++. .++.+|+||+|++.+.+....
T Consensus 174 ~~~~~~k~~~~~~~~~~~~~iV~~S~~l~~~~~~~--~~~--------~~i~vI~NGid~~~~~~~~~~----------- 232 (405)
T PRK10125 174 HQLVAGKRQLFREMLALGCQFISPSQHVADAFNSL--YGP--------GRCRIINNGIDMATEAILAEL----------- 232 (405)
T ss_pred HHHHHHHHHHHHHHhhcCcEEEEcCHHHHHHHHHH--cCC--------CCEEEeCCCcCcccccccccc-----------
Confidence 11122223333445789999999999988752 332 289999999997543322110
Q ss_pred hcchHHHHHHHHHHhCCCCCCCCcEEEEEcCc--ccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCC
Q 007224 381 MDAKPLLKEALQAEVGLPVDRNIPVIGFIGRL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE 458 (612)
Q Consensus 381 ~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl--~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~ 458 (612)
...+ ..+++++|+++|+. .+.||++.+++|+.++. ++++|+|+|.|++.. ..
T Consensus 233 --------~~~~------~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-~~~~L~ivG~g~~~~-----------~~ 286 (405)
T PRK10125 233 --------PPVR------ETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-DKIELHTFGKFSPFT-----------AG 286 (405)
T ss_pred --------cccc------cCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-CCeEEEEEcCCCccc-----------cc
Confidence 0000 11355789999994 37899999999999884 589999999876321 12
Q ss_pred ceEEEecc-ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCC
Q 007224 459 KARGVAKF-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 459 ~i~~~~~~-~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 537 (612)
.+...+.. +...+..+|+.||++|+||.+|+||++++|||+||+|||+|++||++|++.++ +|+++ ++
T Consensus 287 ~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G~lv----------~~ 355 (405)
T PRK10125 287 NVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GGKTV----------SE 355 (405)
T ss_pred ceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cEEEE----------CC
Confidence 24444432 44566789999999999999999999999999999999999999999999875 89987 99
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 007224 538 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 538 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l 587 (612)
+|+++|++.+...+.+.......+.+++.+.+.|||+.++++|+++|+++
T Consensus 356 ~d~~~La~~~~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 356 EEVLQLAQLSKPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred CCHHHHHhccCHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 99999998654333220000011224444678899999999999999864
No 27
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=100.00 E-value=1.5e-34 Score=309.97 Aligned_cols=380 Identities=23% Similarity=0.276 Sum_probs=264.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
+++++.+...+| ..||++.++..|+.+|+++||+|+|++...+...... ....+++.+
T Consensus 7 ~~~~~~~~~~~~--~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~~~~~~~~--------------------~~~~~~~~~ 64 (398)
T cd03800 7 LHGSPLAQPGGA--DTGGQNVYVLELARALARLGHEVDIFTRRIDDALPPI--------------------VELAPGVRV 64 (398)
T ss_pred ccccccccCCCC--CCCceeehHHHHHHHHhccCceEEEEEecCCcccCCc--------------------cccccceEE
Confidence 444444444344 3799999999999999999999999997643211100 011234555
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.+...... .+. .......+..++..+...++... .+|| +||+|.+..++..
T Consensus 65 ~~~~~~~~~-----------~~~------~~~~~~~~~~~~~~~~~~~~~~~----------~~~D-iv~~~~~~~~~~~ 116 (398)
T cd03800 65 VRVPAGPAE-----------YLP------KEELWPYLDEFADDLLRFLRREG----------GRPD-LIHAHYWDSGLVA 116 (398)
T ss_pred Eeccccccc-----------CCC------hhhcchhHHHHHHHHHHHHHhcC----------CCcc-EEEEecCccchHH
Confidence 444321100 000 00000111223444444444321 1599 9999998888777
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
..++.. .++|++++.|+........ ...... .........++..++.+|.++++
T Consensus 117 ~~~~~~-------~~~~~i~~~h~~~~~~~~~------~~~~~~-------------~~~~~~~~~~~~~~~~ad~ii~~ 170 (398)
T cd03800 117 LLLARR-------LGIPLVHTFHSLGAVKRRH------LGAADT-------------YEPARRIEAEERLLRAADRVIAS 170 (398)
T ss_pred HHHHhh-------cCCceEEEeecccccCCcc------cccccc-------------cchhhhhhHHHHHHhhCCEEEEc
Confidence 766654 4889999999653211100 000000 00011223456678899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+...+.+.+. ++.. ..++.+|+||+|.+.|.+.... ...+.+.+.+ ++.+
T Consensus 171 s~~~~~~~~~~--~~~~------~~~~~vi~ng~~~~~~~~~~~~-------------------~~~~~~~~~~--~~~~ 221 (398)
T cd03800 171 TPQEAEELYSL--YGAY------PRRIRVVPPGVDLERFTPYGRA-------------------EARRARLLRD--PDKP 221 (398)
T ss_pred CHHHHHHHHHH--cccc------ccccEEECCCCCccceecccch-------------------hhHHHhhccC--CCCc
Confidence 99998888752 2222 1268999999999888665321 1113344443 3458
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchh----HHHHHHHHHHHCC--CceEEEeccChHHHHHHHH
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~ 476 (612)
+|+|+||+.+.||++.+++++.++.+ ++++|+++|++... ....++.+..+++ +++.+.+..+.+++..+++
T Consensus 222 ~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 301 (398)
T cd03800 222 RILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPGRVSREDLPALYR 301 (398)
T ss_pred EEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHH
Confidence 99999999999999999999999975 68999999987632 2344566666554 4577777778888889999
Q ss_pred hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH
Q 007224 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 477 ~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~ 556 (612)
.||++++||..|+||++++|||+||+|||+++.+|..|++.++.+|+++ ++.|+++++++|.+++++ +
T Consensus 302 ~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~ 369 (398)
T cd03800 302 AADVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLV----------DPRDPEALAAALRRLLTD--P 369 (398)
T ss_pred hCCEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEe----------CCCCHHHHHHHHHHHHhC--H
Confidence 9999999999999999999999999999999999999999999999988 899999999999999998 6
Q ss_pred HHHHHHHHHH---HHhcCCcHHHHHHHH
Q 007224 557 QALAEMMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 557 ~~~~~~~~~~---~~~~~sw~~~a~~~~ 581 (612)
+.+.+|++++ +.++|||+.++++|+
T Consensus 370 ~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 370 ALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 6677777666 358999999999986
No 28
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=6.2e-34 Score=320.41 Aligned_cols=472 Identities=19% Similarity=0.252 Sum_probs=351.7
Q ss_pred eEEEEecccc-----CccccccHHHHhhhhHHHHHhCCCeEEEEeecCCc-cc--------------ccCCc--------
Q 007224 86 NILFVGTEVA-----PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-YK--------------DAWDT-------- 137 (612)
Q Consensus 86 kIl~v~~~~~-----P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~-~~--------------~~~~~-------- 137 (612)
-++++|.||. |. ..||+|...+...++++..|...+-+...|.+ |- +.|+.
T Consensus 87 ~~aYFs~E~gl~~~lpi-YsGGLG~LAgd~lksasdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~ 165 (778)
T cd04299 87 VAAYFSMEFGLHESLPI-YSGGLGILAGDHLKAASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV 165 (778)
T ss_pred eeEEeccccccCCCCCc-cCchHHHHHHHHHHHHHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE
Confidence 3459998865 42 68999999999999999999999999876542 11 11211
Q ss_pred ------cEEEEEEeCCeeeEEEEEEeeecCceEEEEeChhhhhhhhcCCCC-CcccCCCCCCCCcchhHH---HHHHHHH
Q 007224 138 ------DVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQ-SKIYGPRTGEDYQDNQLR---FSLLCQA 207 (612)
Q Consensus 138 ------~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w~~~~-~~~y~~~~~~~~~~~~~~---~~~~~~~ 207 (612)
...+.+.+.++...++.+.....+++++++|++.+-.. .|.+.. ..+|++ ++..| +.+|+.+
T Consensus 166 ~~~~G~~~~v~v~l~g~~v~~rvw~~~vg~v~lylLDtd~~~n~-~~~R~iT~~LYg~-------D~~~Rl~Qe~~Lg~a 237 (778)
T cd04299 166 RDADGEPVRVSVELPGRTVYARVWKAQVGRVPLYLLDTDIPENS-PDDRGITDRLYGG-------DQETRIQQEILLGIG 237 (778)
T ss_pred ecCCCCeEEEEEeeCCCceEEEEEEEEcCCCCEEEecCCccccc-hhhcccccCCCCC-------cHHHHHHHHHHHHHH
Confidence 23556777777778889988888999999998763111 122122 247873 34555 6999999
Q ss_pred HHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhh-cCCCC-------CCCceEEEEEecCcccc--cCCc
Q 007224 208 ALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMY-KPKGM-------YKSAKVVFCIHNIAYQG--RFAF 277 (612)
Q Consensus 208 ~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~-~~~~~-------~~~~~vv~~iH~~~~~~--~~~~ 277 (612)
.+++++.+++ .|| |||+||||+++++..+.+.+ +..+. ....++|||+|++.++| +|+.
T Consensus 238 gl~~Lr~lg~----------~pd-ViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~ 306 (778)
T cd04299 238 GVRALRALGI----------KPT-VYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPP 306 (778)
T ss_pred HHHHHHHhCC----------CCe-EEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCH
Confidence 9999988864 599 99999999999998322211 11111 12578999999999999 9997
Q ss_pred cccc--------ccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHH---HHHHHccccCCccchhhh
Q 007224 278 EDFG--------LLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHY---AQELVSGEDKGVELDNII 346 (612)
Q Consensus 278 ~~~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~---~~~l~~~~~~g~~~~~~~ 346 (612)
..+. .++++............-. .....++++.++..|+.+.+||+-+ .+++......|.+..
T Consensus 307 ~l~~~~~~~~~~~lgl~~~~~~~lg~e~~~~---~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~~--- 380 (778)
T cd04299 307 DLVERYFGPYARELGLSRDRFLALGRENPGD---DPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPVE--- 380 (778)
T ss_pred HHHHHHhhHHHHHcCCCHHHHhhhccccccC---ccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCcc---
Confidence 7663 3566654332221111000 0134699999999999999999987 555554223344432
Q ss_pred hccCeEEeeCCCccCccC-CCCcccccccc--------------------CcchhhcchHHHHHHHHHHh----------
Q 007224 347 RKTGIKGIVNGMDVQEWN-PLTDKYIGVKY--------------------DASTVMDAKPLLKEALQAEV---------- 395 (612)
Q Consensus 347 ~~~~i~vI~Ngvd~~~~~-p~~~~~~~~~~--------------------~~~~~~~~~~~~k~~l~~~~---------- 395 (612)
..++..|.||||...|. |..++.+.... ....+...|..+|.++++.+
T Consensus 381 -~~~i~~ITNGVh~~~W~~P~~~~l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~ 459 (778)
T cd04299 381 -EVPIGHVTNGVHVPTWVAPEMRELYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLR 459 (778)
T ss_pred -cCceeceeCCcchhhhcCHHHHHHHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 33799999999999998 77666553221 12334567777888776664
Q ss_pred -----------CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCc------hhHHHHHHHH
Q 007224 396 -----------GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK------KPMEKQLEQL 452 (612)
Q Consensus 396 -----------gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~------~~~~~~l~~l 452 (612)
+.+.+++.++|+|++|+..+||.++++..+.++.+ .++|||+.|++. +.+.+.+.++
T Consensus 460 ~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~gK~iIk~i~~~ 539 (778)
T cd04299 460 RGASAEEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEPGKELIQEIVEF 539 (778)
T ss_pred cCCchhhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchHHHHHHHHHHHH
Confidence 55677888999999999999999999999888744 479999999987 4566788888
Q ss_pred HH--HCCCceEEEeccChHHHHHHHHhcCEEEeCCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEeccc
Q 007224 453 EI--LYPEKARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSF 528 (612)
Q Consensus 453 ~~--~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~ 528 (612)
.. ++++++.+...++..+++.++++||++++||+ +|+||++.+-||..|.+-+++-.|...|.- ++.|||.||.-
T Consensus 540 a~~p~~~~kVvfle~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig~~ 618 (778)
T cd04299 540 SRRPEFRGRIVFLEDYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIGDG 618 (778)
T ss_pred HhCcCCCCcEEEEcCCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeCCC
Confidence 88 66778999999999999999999999999999 899999999999999999999999999887 78999999762
Q ss_pred cc--ccCCCCCCCHHHHHHHHHHHHH-hh-C------HHHHHHHHHHHHHh---cCCcHHHHHHHHHHHH
Q 007224 529 SV--DCEAVDPVDVAAVSTTVRRALA-TY-G------TQALAEMMKNGMAQ---DLSWKGPAKKWEETLL 585 (612)
Q Consensus 529 ~~--~~~~v~~~d~~~la~~l~~ll~-~~-~------~~~~~~~~~~~~~~---~~sw~~~a~~~~~~y~ 585 (612)
.. +.+.-|..|.++|-++|++.+- .+ + +..+.+|.+++|.+ .|||++++++|.+-|.
T Consensus 619 ~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 619 DEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred ccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 21 2233355778888899976554 22 1 46799999999887 9999999999987554
No 29
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=100.00 E-value=5.4e-34 Score=304.49 Aligned_cols=359 Identities=18% Similarity=0.185 Sum_probs=243.2
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+ ..||+++++..|+..|.+.||+|+++++..+. +.++.. +.+ +....|.+.
T Consensus 1 ki~~~~~~~----~~GGv~~~~~~l~~~l~~~g~~v~~~~~~~~~--~~~~~~-----------~~~---~~~~~g~~~- 59 (372)
T cd03792 1 KVLHVNSTP----YGGGVAEILHSLVPLMRDLGVDTRWEVIKGDP--EFFNVT-----------KKF---HNALQGADI- 59 (372)
T ss_pred CeEEEeCCC----CCCcHHHHHHHHHHHHHHcCCCceEEecCCCh--hHHHHH-----------HHh---hHhhcCCCC-
Confidence 699999873 37999999999999999999999999875221 100000 000 000001111
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhH-hhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPR-ILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+ ..... ...+......... .+ ...+|| |||+|++....++
T Consensus 60 --------------------~-------~~~~~--~~~~~~~~~~~~~~~~---------~~~~~D-vv~~h~~~~~~~~ 100 (372)
T cd03792 60 --------------------E-------LSEEE--KEIYLEWNEENAERPL---------LDLDAD-VVVIHDPQPLALP 100 (372)
T ss_pred --------------------C-------CCHHH--HHHHHHHHHHHhcccc---------ccCCCC-EEEECCCCchhHH
Confidence 0 11111 0111111111111 11 123799 9999988753333
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
...+ . .++|++++.|+..... ....+.+++..+..+|.+++.
T Consensus 101 ~~~~-~-------~~~~~i~~~H~~~~~~------------------------------~~~~~~~~~~~~~~~d~~i~~ 142 (372)
T cd03792 101 LFKK-K-------RGRPWIWRCHIDLSSP------------------------------NRRVWDFLQPYIEDYDAAVFH 142 (372)
T ss_pred Hhhh-c-------CCCeEEEEeeeecCCC------------------------------cHHHHHHHHHHHHhCCEEeec
Confidence 2222 1 3789999999532100 012345667778899999998
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|..+.. .+++.. ++ +||||+|....... .++ +.....+++++|++. +.+
T Consensus 143 ~~~~~~-------~~~~~~------~~-vipngvd~~~~~~~-------~~~--------~~~~~~~~~~~~~~~--~~~ 191 (372)
T cd03792 143 LPEYVP-------PQVPPR------KV-IIPPSIDPLSGKNR-------ELS--------PADIEYILEKYGIDP--ERP 191 (372)
T ss_pred HHHhcC-------CCCCCc------eE-EeCCCCCCCccccC-------CCC--------HHHHHHHHHHhCCCC--CCc
Confidence 843221 222221 44 99999996531110 011 122456777888763 558
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCch---hHHHHHHHHHHH--CCCceEEEecc--ChHHHHHHH
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEIL--YPEKARGVAKF--NIPLAHMII 475 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~--~~~~i~~~~~~--~~~~~~~~l 475 (612)
+|+++||+.++||++.+++|+..+.+ ++++|+|+|+|+. ...+.++++.+. ...++.+.+.. +.+++..+|
T Consensus 192 ~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 271 (372)
T cd03792 192 YITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVLTLPPVSDLEVNALQ 271 (372)
T ss_pred EEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEEecCCCCHHHHHHHH
Confidence 99999999999999999999998865 6899999999852 233344454432 23456665554 667888899
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 555 (612)
+.||++++||.+|+||++++|||+||+|||+|+.||..+++.++.+|+++ + +.++++.+|.+++.+
T Consensus 272 ~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~----------~--~~~~~a~~i~~ll~~-- 337 (372)
T cd03792 272 RASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLV----------D--TVEEAAVRILYLLRD-- 337 (372)
T ss_pred HhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEe----------C--CcHHHHHHHHHHHcC--
Confidence 99999999999999999999999999999999999999999999999976 3 567889999999987
Q ss_pred HHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 556 TQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 556 ~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
++.+.+|++++ +.++|||+.++++|+++|+++
T Consensus 338 ~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 338 PELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 66666776665 468999999999999999863
No 30
>PLN02846 digalactosyldiacylglycerol synthase
Probab=100.00 E-value=5.9e-35 Score=313.59 Aligned_cols=380 Identities=14% Similarity=0.079 Sum_probs=237.2
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCC-CeEEEEeecCCcccc--cCCccEEEEEEeCCeeeEEEEEEeee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPRYDQYKD--AWDTDVVIELKVGDKIEKVRFFHCHK 159 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-h~V~vit~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (612)
++|||++++..|.|| .+|+...+..++..|+++| |+|++|+|.++..+. .|.....+..... ....++ . .
T Consensus 3 ~~mrIaivTdt~lP~--vnGva~s~~~~a~~L~~~G~heV~vvaP~~~~~~~~~~~~~~~~f~~~~~-~e~~~~---~-~ 75 (462)
T PLN02846 3 KKQHIAIFTTASLPW--MTGTAVNPLFRAAYLAKDGDREVTLVIPWLSLKDQKLVYPNKITFSSPSE-QEAYVR---Q-W 75 (462)
T ss_pred CCCEEEEEEcCCCCC--CCCeeccHHHHHHHHHhcCCcEEEEEecCCccccccccccccccccCchh-hhhhhh---h-h
Confidence 479999999999999 9999999999999999999 899999998653211 1110000000000 000000 0 0
Q ss_pred cCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchh---HHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEec
Q 007224 160 RGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQ---LRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 236 (612)
Q Consensus 160 ~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h 236 (612)
.+-.++++....+ ..|. ..+ .+.......+.+.++. ++|| |||+|
T Consensus 76 ~~~~v~r~~s~~~-----------p~yp--------~r~~~~~r~~~~~~~i~~~l~~------------~~pD-VIHv~ 123 (462)
T PLN02846 76 LEERISFLPKFSI-----------KFYP--------GKFSTDKRSILPVGDISETIPD------------EEAD-IAVLE 123 (462)
T ss_pred ccCeEEEeccccc-----------ccCc--------ccccccccccCChHHHHHHHHh------------cCCC-EEEEc
Confidence 0111222211100 0111 100 0111112334444443 3799 99998
Q ss_pred C-CccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCC-CCCcCCcchhHHHHH
Q 007224 237 D-WHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGY-NKPVRGRKINWMKAG 314 (612)
Q Consensus 237 ~-~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~k~~ 314 (612)
+ ++.++.....+...+ .++ +|.+.|.... ... ...+ .+. ...+.....+|++..
T Consensus 124 tP~~LG~~~~g~~~~~k-----~~~-vV~tyHT~y~-~Y~-----~~~~------------~g~~~~~l~~~~~~~~~r~ 179 (462)
T PLN02846 124 EPEHLTWYHHGKRWKTK-----FRL-VIGIVHTNYL-EYV-----KREK------------NGRVKAFLLKYINSWVVDI 179 (462)
T ss_pred CchhhhhHHHHHHHHhc-----CCc-EEEEECCChH-HHH-----HHhc------------cchHHHHHHHHHHHHHHHH
Confidence 7 333443111221111 234 7888995210 000 0000 000 000001112233222
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
.+|.++++|....+ +.+ .+...+||||.+.|.|... ..++.
T Consensus 180 --~~d~vi~pS~~~~~-l~~---------------~~i~~v~GVd~~~f~~~~~---------------------~~~~~ 220 (462)
T PLN02846 180 --YCHKVIRLSAATQD-YPR---------------SIICNVHGVNPKFLEIGKL---------------------KLEQQ 220 (462)
T ss_pred --hcCEEEccCHHHHH-Hhh---------------CEEecCceechhhcCCCcc---------------------cHhhh
Confidence 48999999986655 443 3334568999998887632 11222
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHH
Q 007224 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~ 472 (612)
.. +.+.-.+.++|+||+.++||++.|++++.++.+ ++++|+|+|+|+ .++.+++++.+++.....+.++... .
T Consensus 221 ~~-~~~~~~~~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp--~~~~L~~~a~~l~l~~~vf~G~~~~--~ 295 (462)
T PLN02846 221 KN-GEQAFTKGAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGE--DSDEVKAAAEKLELDVRVYPGRDHA--D 295 (462)
T ss_pred cC-CCCCcceEEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCc--cHHHHHHHHHhcCCcEEEECCCCCH--H
Confidence 22 222113579999999999999999999999865 689999999998 5777888888776434344444332 2
Q ss_pred HHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
.+++.+|+||+||..|+||++++||||||+|||+++.++ .|++.++.+|+++ .|.++++++|.++++
T Consensus 296 ~~~~~~DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~------------~~~~~~a~ai~~~l~ 362 (462)
T PLN02846 296 PLFHDYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTY------------DDGKGFVRATLKALA 362 (462)
T ss_pred HHHHhCCEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEec------------CCHHHHHHHHHHHHc
Confidence 599999999999999999999999999999999999998 5999999999965 589999999999998
Q ss_pred hhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l 587 (612)
+. +..+ ... ..+.|||+..+++++++|+--
T Consensus 363 ~~-~~~~---~~~-a~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 363 EE-PAPL---TDA-QRHELSWEAATERFLRVADLD 392 (462)
T ss_pred cC-chhH---HHH-HHHhCCHHHHHHHHHHHhccC
Confidence 63 2222 222 236999999999999999743
No 31
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=100.00 E-value=2.1e-34 Score=309.05 Aligned_cols=229 Identities=16% Similarity=0.180 Sum_probs=182.0
Q ss_pred HHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHH
Q 007224 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~ 389 (612)
+.+..++.+|.|+++|+..++.+.+. ++... ...+.+|+||+|.+.|.+....
T Consensus 147 ~e~~~~~~ad~ii~~s~~~~~~~~~~--~~~~~-----~~~~~vi~n~vd~~~~~~~~~~-------------------- 199 (392)
T cd03805 147 LEEFTTGMADKIVVNSNFTASVFKKT--FPSLA-----KNPREVVYPCVDTDSFESTSED-------------------- 199 (392)
T ss_pred HHHHHhhCceEEEEcChhHHHHHHHH--hcccc-----cCCcceeCCCcCHHHcCccccc--------------------
Confidence 44556789999999999999988752 22111 1134689999999888664321
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-----CCcEEEEEeCCch------hHHHHHHHHHHH-C-
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-----ENVQIIVLGTGKK------PMEKQLEQLEIL-Y- 456 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~-----~~~~lvivG~g~~------~~~~~l~~l~~~-~- 456 (612)
..+.....+ ++.++|+++||+.+.||++.++++++++.+ ++++|+++|+++. .+.+.++++..+ .
T Consensus 200 ~~~~~~~~~--~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~ 277 (392)
T cd03805 200 PDPGLLIPK--SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLL 277 (392)
T ss_pred ccccccccC--CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcC
Confidence 011122222 355899999999999999999999999864 4899999999763 245677777766 4
Q ss_pred -CCceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCC
Q 007224 457 -PEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 457 -~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v 535 (612)
.+++.+.+..+.+....+|+.||++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++
T Consensus 278 l~~~V~f~g~~~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~---------- 347 (392)
T cd03805 278 LEDQVIFLPSISDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLC---------- 347 (392)
T ss_pred CCceEEEeCCCChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEe----------
Confidence 356888888888888899999999999999999999999999999999999999999999999999986
Q ss_pred CCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHH
Q 007224 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKW 580 (612)
Q Consensus 536 ~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~ 580 (612)
++ |+++++++|.+++++ ++.+.++++++ +.++|||+.+++++
T Consensus 348 ~~-~~~~~a~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 348 EP-TPEEFAEAMLKLAND--PDLADRMGAAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred CC-CHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHhcCHHHHhhhC
Confidence 65 999999999999998 55556666655 57899999998764
No 32
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=5.2e-33 Score=294.02 Aligned_cols=356 Identities=18% Similarity=0.186 Sum_probs=241.1
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. ..||+++++..|+++|.++||+|+|++........ ....+|++++
T Consensus 1 ~i~~i~~~~~~~-~~gG~~~~~~~la~~L~~~g~~v~v~~~~~~~~~~----------------------~~~~~~i~~~ 57 (363)
T cd04955 1 KIAIIGTRGIPA-KYGGFETFVEELAPRLVARGHEVTVYCRSPYPKQK----------------------ETEYNGVRLI 57 (363)
T ss_pred CeEEEecCcCCc-ccCcHHHHHHHHHHHHHhcCCCEEEEEccCCCCCc----------------------ccccCCceEE
Confidence 699998875553 58999999999999999999999999986322111 1122466666
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.++.+.. . ....+......+....+ . ++| ++|+|.+.....+.
T Consensus 58 ~~~~~~~--~---------------------~~~~~~~~~~~~~~~~~--~-----------~~~-~~~i~~~~~~~~~~ 100 (363)
T cd04955 58 HIPAPEI--G---------------------GLGTIIYDILAILHALF--V-----------KRD-IDHVHALGPAIAPF 100 (363)
T ss_pred EcCCCCc--c---------------------chhhhHHHHHHHHHHHh--c-----------cCC-eEEEEecCccHHHH
Confidence 5532210 0 00000000011111111 0 244 44444333322222
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcc-hhHHHHHHHhcCEEEec
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK-INWMKAGILESDMVLTV 324 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~k~~~~~ad~vi~v 324 (612)
...... .+.|+++++|+..+... ... .+ .... ....+..++.+|.++++
T Consensus 101 ~~~~~~------~~~~~v~~~h~~~~~~~---------~~~--------------~~-~~~~~~~~~~~~~~~ad~ii~~ 150 (363)
T cd04955 101 LPLLRL------KGKKVVVNMDGLEWKRA---------KWG--------------RP-AKRYLKFGEKLAVKFADRLIAD 150 (363)
T ss_pred HHHHHh------cCCCEEEEccCcceeec---------ccc--------------cc-hhHHHHHHHHHHHhhccEEEeC
Confidence 221111 47899999997543110 000 00 0011 22335567899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+.. .+|.+ . .+||||+|...+.+. ...+.+.+++ +.+
T Consensus 151 s~~~~~~~~~--~~~~~--------~-~~i~ngv~~~~~~~~----------------------~~~~~~~~~~---~~~ 194 (363)
T cd04955 151 SPGIKEYLKE--KYGRD--------S-TYIPYGADHVVSSEE----------------------DEILKKYGLE---PGR 194 (363)
T ss_pred CHHHHHHHHH--hcCCC--------C-eeeCCCcChhhcchh----------------------hhhHHhcCCC---CCc
Confidence 9999999864 24432 3 889999998766431 1223445554 235
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc--hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~--~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
.++|+||+.+.||++.+++|+.++.. +++|+++|+++ ..+.+.+++. .....++.+.+..+.+....++..||+++
T Consensus 195 ~i~~~G~~~~~Kg~~~li~a~~~l~~-~~~l~ivG~~~~~~~~~~~~~~~-~~~~~~V~~~g~~~~~~~~~~~~~ad~~v 272 (363)
T cd04955 195 YYLLVGRIVPENNIDDLIEAFSKSNS-GKKLVIVGNADHNTPYGKLLKEK-AAADPRIIFVGPIYDQELLELLRYAALFY 272 (363)
T ss_pred EEEEEecccccCCHHHHHHHHHhhcc-CceEEEEcCCCCcchHHHHHHHH-hCCCCcEEEccccChHHHHHHHHhCCEEE
Confidence 78899999999999999999999865 89999999974 2344444431 22335688887778888888999999999
Q ss_pred eCCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 483 IPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 483 ~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
+||.. |+||++++|||+||+|||+|+.|+..|++.+ +|+++ ++.|. ++++|.+++++ ++.+.+
T Consensus 273 ~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~----------~~~~~--l~~~i~~l~~~--~~~~~~ 336 (363)
T cd04955 273 LHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYF----------KVGDD--LASLLEELEAD--PEEVSA 336 (363)
T ss_pred eCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEe----------cCchH--HHHHHHHHHhC--HHHHHH
Confidence 99999 9999999999999999999999999999976 67876 66665 99999999998 555556
Q ss_pred HHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 562 MMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
+++++ ..++|||+.++++|+++|+
T Consensus 337 ~~~~~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 337 MAKAARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 65555 4678999999999999984
No 33
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=100.00 E-value=8.3e-34 Score=301.70 Aligned_cols=347 Identities=15% Similarity=0.187 Sum_probs=240.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhC--CCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~--Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
|||++++..+.. .||+++++..|+++|.++ ||+|.++++..... ..|.. ...+.. ..+.+
T Consensus 1 mkI~~~~~~~~~---~GG~e~~~~~l~~~L~~~~~g~~v~v~~~~~~~~-~~~~~-------------~~~~~~-~~~~~ 62 (359)
T PRK09922 1 MKIAFIGEAVSG---FGGMETVISNVINTFEESKINCEMFFFCRNDKMD-KAWLK-------------EIKYAQ-SFSNI 62 (359)
T ss_pred CeeEEecccccC---CCchhHHHHHHHHHhhhcCcceeEEEEecCCCCC-hHHHH-------------hcchhc-ccccc
Confidence 899999876433 599999999999999999 89999999763211 11100 000000 00000
Q ss_pred eEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccch
Q 007224 163 DRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~ 242 (612)
.+.+ ..... ....+.+.++. .+|| |||+|+....+
T Consensus 63 ~~~~----------------------------~~~~~----~~~~l~~~l~~------------~~~D-ii~~~~~~~~~ 97 (359)
T PRK09922 63 KLSF----------------------------LRRAK----HVYNFSKWLKE------------TQPD-IVICIDVISCL 97 (359)
T ss_pred hhhh----------------------------hcccH----HHHHHHHHHHh------------cCCC-EEEEcCHHHHH
Confidence 0000 00000 11122233333 2799 99999765545
Q ss_pred HHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEE
Q 007224 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 322 (612)
+...++.... ...+++.+.|.... . . ....+ ..+..+|.++
T Consensus 98 ~~~~~~~~~~-----~~~~~~~~~h~~~~-~--------------~-----------------~~~~~--~~~~~~d~~i 138 (359)
T PRK09922 98 YANKARKKSG-----KQFKIFSWPHFSLD-H--------------K-----------------KHAEC--KKITCADYHL 138 (359)
T ss_pred HHHHHHHHhC-----CCCeEEEEecCccc-c--------------c-----------------chhhh--hhhhcCCEEE
Confidence 4444444321 23455666663210 0 0 00000 1136899999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccC-CCCccccccccCcchhhcchHHHHHHHHHHhCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWN-PLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~-p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~ 401 (612)
++|+..++.+.. +|++.+ ++.+|+||+|.+.+. +.. ..+
T Consensus 139 ~~S~~~~~~~~~---~~~~~~------ki~vi~N~id~~~~~~~~~-------------------------------~~~ 178 (359)
T PRK09922 139 AISSGIKEQMMA---RGISAQ------RISVIYNPVEIKTIIIPPP-------------------------------ERD 178 (359)
T ss_pred EcCHHHHHHHHH---cCCCHH------HEEEEcCCCCHHHccCCCc-------------------------------ccC
Confidence 999999999985 566554 799999999966543 211 112
Q ss_pred CCcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccC--hHHHHHHH
Q 007224 402 NIPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFN--IPLAHMII 475 (612)
Q Consensus 402 ~~~~il~iGrl~--~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~--~~~~~~~l 475 (612)
+.++|+|+||+. ++||++.+++++.++. ++++|+|+|+|+ ..+.++++.++++ +++.+.+..+ .+.+..+|
T Consensus 179 ~~~~i~~~Grl~~~~~k~~~~l~~a~~~~~-~~~~l~ivG~g~--~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~ 255 (359)
T PRK09922 179 KPAVFLYVGRLKFEGQKNVKELFDGLSQTT-GEWQLHIIGDGS--DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKI 255 (359)
T ss_pred CCcEEEEEEEEecccCcCHHHHHHHHHhhC-CCeEEEEEeCCc--cHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHH
Confidence 457899999996 4699999999999885 489999999997 4566777777654 4566665443 36677899
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
+.+|++++||.+|+||++++|||+||+|||+++ .||..|++.++.+|+++ +++|+++++++|.++++++
T Consensus 256 ~~~d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv----------~~~d~~~la~~i~~l~~~~ 325 (359)
T PRK09922 256 KNVSALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELY----------TPGNIDEFVGKLNKVISGE 325 (359)
T ss_pred hcCcEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEE----------CCCCHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999 89999999999999987 9999999999999999984
Q ss_pred CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
.......+. ....+|+-+...+++.++|.+++
T Consensus 326 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 357 (359)
T PRK09922 326 VKYQHDAIP--NSIERFYEVLYFKNLNNALFSKL 357 (359)
T ss_pred ccCCHHHHH--HHHHHhhHHHHHHHHHHHHHHHh
Confidence 321222222 23567888999999999998876
No 34
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=100.00 E-value=6.5e-33 Score=294.35 Aligned_cols=273 Identities=22% Similarity=0.269 Sum_probs=213.1
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+|| |||+|....++....+.+. .++|++++.|+......... . .. . . ....
T Consensus 82 ~~d-vvh~~~~~~~~~~~~~~~~-------~~~p~i~~~h~~~~~~~~~~---~------~~-~----------~-~~~~ 132 (367)
T cd05844 82 RPD-LVHAHFGFDGVYALPLARR-------LGVPLVVTFHGFDATTSLAL---L------LR-S----------R-WALY 132 (367)
T ss_pred CCC-EEEeccCchHHHHHHHHHH-------cCCCEEEEEeCccccccchh---h------cc-c----------c-hhHH
Confidence 699 9999976555554444433 48999999996432110000 0 00 0 0 0112
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
....+..++.+|.++++|+..++.+.+ +|.+.+ ++.+++||+|.+.|.+...
T Consensus 133 ~~~~~~~~~~~d~ii~~s~~~~~~~~~---~~~~~~------~i~vi~~g~d~~~~~~~~~------------------- 184 (367)
T cd05844 133 ARRRRRLARRAALFIAVSQFIRDRLLA---LGFPPE------KVHVHPIGVDTAKFTPATP------------------- 184 (367)
T ss_pred HHHHHHHHHhcCEEEECCHHHHHHHHH---cCCCHH------HeEEecCCCCHHhcCCCCC-------------------
Confidence 234456678999999999999999986 465544 7999999999887765421
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHC--CCceEEE
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGV 463 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~i~~~ 463 (612)
..+.++++|+|++.+.||++.+++|+.++.+ ++++|+|+|.|+ +.+.++++..++ ..++.+.
T Consensus 185 ------------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~ 250 (367)
T cd05844 185 ------------ARRPPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGP--LLAALEALARALGLGGRVTFL 250 (367)
T ss_pred ------------CCCCcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCch--HHHHHHHHHHHcCCCCeEEEC
Confidence 1244789999999999999999999999865 689999999887 556777777764 4567777
Q ss_pred eccChHHHHHHHHhcCEEEeCCC------CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCC
Q 007224 464 AKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 464 ~~~~~~~~~~~l~~adi~l~pS~------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 537 (612)
+..+.+++..+|+.||++++||. .|+||++++|||+||+|||+++.+|..|++.++.+|+++ ++
T Consensus 251 g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~----------~~ 320 (367)
T cd05844 251 GAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLV----------PE 320 (367)
T ss_pred CCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEE----------CC
Confidence 77777888899999999999997 499999999999999999999999999999999999987 89
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHH
Q 007224 538 VDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEET 583 (612)
Q Consensus 538 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~ 583 (612)
.|+++++++|.+++++ ++.+.+++.++ +.++|||+..+++++++
T Consensus 321 ~d~~~l~~~i~~l~~~--~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~i 367 (367)
T cd05844 321 GDVAALAAALGRLLAD--PDLRARMGAAGRRRVEERFDLRRQTAKLEAL 367 (367)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 9999999999999997 55566666555 56899999999998763
No 35
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=100.00 E-value=8.5e-33 Score=291.71 Aligned_cols=338 Identities=23% Similarity=0.267 Sum_probs=240.9
Q ss_pred ccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeChhhhhhhhc
Q 007224 99 KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVW 178 (612)
Q Consensus 99 ~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w 178 (612)
..||+++++..|+++|+++||+|.++++....... ....|++++.+... .+
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~~~~-----------------------~~~~~~~~~~~~~~---~~--- 58 (355)
T cd03819 8 ESGGVERGTLELARALVERGHRSLVASAGGRLVAE-----------------------LEAEGSRHIKLPFI---SK--- 58 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcCCEEEEEcCCCchHHH-----------------------HHhcCCeEEEcccc---cc---
Confidence 46999999999999999999999999875221110 01123333322100 00
Q ss_pred CCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCC
Q 007224 179 GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYK 258 (612)
Q Consensus 179 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~ 258 (612)
+..........+...++. .+|| +||+|+....+...++... .
T Consensus 59 ------------------~~~~~~~~~~~l~~~~~~------------~~~d-ii~~~~~~~~~~~~~~~~~-------~ 100 (355)
T cd03819 59 ------------------NPLRILLNVARLRRLIRE------------EKVD-IVHARSRAPAWSAYLAARR-------T 100 (355)
T ss_pred ------------------chhhhHHHHHHHHHHHHH------------cCCC-EEEECCCchhHHHHHHHHh-------c
Confidence 000111112223333332 3799 9999987666555544433 4
Q ss_pred CceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccC
Q 007224 259 SAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDK 338 (612)
Q Consensus 259 ~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~ 338 (612)
++|+++++|+.... ..+.+..+..+|.++++|+...+.+.+ .+
T Consensus 101 ~~~~i~~~h~~~~~-----------------------------------~~~~~~~~~~~~~vi~~s~~~~~~~~~--~~ 143 (355)
T cd03819 101 RPPFVTTVHGFYSV-----------------------------------NFRYNAIMARGDRVIAVSNFIADHIRE--NY 143 (355)
T ss_pred CCCEEEEeCCchhh-----------------------------------HHHHHHHHHhcCEEEEeCHHHHHHHHH--hc
Confidence 79999999953320 013445577899999999999999874 36
Q ss_pred CccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCH
Q 007224 339 GVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGS 418 (612)
Q Consensus 339 g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~ 418 (612)
+++.+ ++.+||||+|...|.+.... ......++++++++ ++.++++|+||+.++||+
T Consensus 144 ~~~~~------k~~~i~ngi~~~~~~~~~~~---------------~~~~~~~~~~~~~~--~~~~~i~~~Gr~~~~Kg~ 200 (355)
T cd03819 144 GVDPD------RIRVIPRGVDLDRFDPGAVP---------------PERILALAREWPLP--KGKPVILLPGRLTRWKGQ 200 (355)
T ss_pred CCChh------hEEEecCCccccccCccccc---------------hHHHHHHHHHcCCC--CCceEEEEeeccccccCH
Confidence 66544 89999999999888654211 11122356777765 355899999999999999
Q ss_pred HHHHHHHHhccc--CCcEEEEEeCCch--hHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCEEEeCC-CCCCCc
Q 007224 419 DILAAAIPHFIK--ENVQIIVLGTGKK--PMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILIPS-RFEPCG 491 (612)
Q Consensus 419 d~ll~a~~~l~~--~~~~lvivG~g~~--~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi~l~pS-~~E~~g 491 (612)
+.+++++.++.+ ++++|+|+|.+.. .+.+.+.+...+++ +++.+.+. .+.+..+++.||++++|| ..|++|
T Consensus 201 ~~li~~~~~l~~~~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~ad~~i~ps~~~e~~~ 278 (355)
T cd03819 201 EVFIEALARLKKDDPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALADIVVSASTEPEAFG 278 (355)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhCCEEEecCCCCCCCc
Confidence 999999999977 6899999999863 34455555555544 34555544 445668999999999999 789999
Q ss_pred HHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HH
Q 007224 492 LIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MA 568 (612)
Q Consensus 492 l~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~ 568 (612)
++++|||+||+|||+++.||..|++.++.+|+++ +++|+++++++|.+++... ++.+.++++++ +.
T Consensus 279 ~~l~EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~-~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 279 RTAVEAQAMGRPVIASDHGGARETVRPGETGLLV----------PPGDAEALAQALDQILSLL-PEGRAKMFAKARMCVE 347 (355)
T ss_pred hHHHHHHhcCCCEEEcCCCCcHHHHhCCCceEEe----------CCCCHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987 9999999999997666531 44555555544 67
Q ss_pred hcCCcHHH
Q 007224 569 QDLSWKGP 576 (612)
Q Consensus 569 ~~~sw~~~ 576 (612)
++|||+.+
T Consensus 348 ~~f~~~~~ 355 (355)
T cd03819 348 TLFSYDRM 355 (355)
T ss_pred HhhhhccC
Confidence 99999853
No 36
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=100.00 E-value=9.1e-33 Score=292.16 Aligned_cols=351 Identities=19% Similarity=0.227 Sum_probs=247.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++.. + ..||.++++..++.+|.++||+|++++....
T Consensus 1 MkIl~~~~~--~--~~gG~~~~~~~l~~~l~~~G~~v~v~~~~~~----------------------------------- 41 (365)
T cd03825 1 MKVLHLNTS--D--ISGGAARAAYRLHRALQAAGVDSTMLVQEKK----------------------------------- 41 (365)
T ss_pred CeEEEEecC--C--CCCcHHHHHHHHHHHHHhcCCceeEEEeecc-----------------------------------
Confidence 899999864 3 2699999999999999999999999987521
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
.+... ++ ..+|| |||+|.+....+.
T Consensus 42 ------~~~~~------------------------------------~~------------~~~~d-iih~~~~~~~~~~ 66 (365)
T cd03825 42 ------ALISK------------------------------------IE------------IINAD-IVHLHWIHGGFLS 66 (365)
T ss_pred ------hhhhC------------------------------------hh------------cccCC-EEEEEccccCccC
Confidence 00000 00 12699 8999986766554
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccc---cccccCCCC-CcCCcchhHHHHHH-HhcC
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSS---FDFIDGYNK-PVRGRKINWMKAGI-LESD 319 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~-~~~~~~~~~~k~~~-~~ad 319 (612)
..+..... .++|+++++|+......-. .. ......+... ..+...+.. ......+.+.+..+ ..++
T Consensus 67 ~~~~~~~~-----~~~~~v~~~hd~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (365)
T cd03825 67 IEDLSKLL-----DRKPVVWTLHDMWPFTGGC--HY--PGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRKRKAWADLNL 137 (365)
T ss_pred HHHHHHHH-----cCCCEEEEcccCccccccc--CC--ccccccccccCCCCCCCCCCCcccHHHHHHHHHHHHhccCCc
Confidence 44333321 3889999999754311000 00 0000000000 000000000 00011122222222 4578
Q ss_pred EEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 320 MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 320 ~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
.++++|+..++.+.+. +.++. .++.+||||+|.+.|.|.. +...+...+++.
T Consensus 138 ~~v~~s~~~~~~~~~~--~~~~~------~~~~vi~ngi~~~~~~~~~--------------------~~~~~~~~~~~~ 189 (365)
T cd03825 138 TIVAPSRWLADCARSS--SLFKG------IPIEVIPNGIDTTIFRPRD--------------------KREARKRLGLPA 189 (365)
T ss_pred EEEehhHHHHHHHHhc--cccCC------CceEEeCCCCcccccCCCc--------------------HHHHHHHhCCCC
Confidence 8999999999888752 22332 3899999999998886542 345567777764
Q ss_pred CCCCcEEEEEcCccc--ccCHHHHHHHHHhccc---CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccC-hHHHHH
Q 007224 400 DRNIPVIGFIGRLEE--QKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-IPLAHM 473 (612)
Q Consensus 400 ~~~~~~il~iGrl~~--~Kg~d~ll~a~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~-~~~~~~ 473 (612)
+.+++++.|+... .||++.+++++..+.+ ++++++++|.+...... ....++.+.+..+ .+.+..
T Consensus 190 --~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~ 260 (365)
T cd03825 190 --DKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPP-------DLPFPVHYLGSLNDDESLAL 260 (365)
T ss_pred --CCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhc-------cCCCceEecCCcCCHHHHHH
Confidence 3467777777665 8999999999999975 78999999998742221 2334577777766 667888
Q ss_pred HHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|+.||++++||..|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 261 ~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~l~~l~~~ 330 (365)
T cd03825 261 IYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLA----------KPGDPEDLAEGIEWLLAD 330 (365)
T ss_pred HHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEe----------CCCCHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999987 888999999999999987
Q ss_pred hCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 554 ~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
++.+.++++++ +.++|||+.++++|+++|+++
T Consensus 331 --~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 331 --PDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred --HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 55555555554 568899999999999999864
No 37
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=100.00 E-value=7.1e-33 Score=290.20 Aligned_cols=357 Identities=20% Similarity=0.211 Sum_probs=255.2
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|...+.+ ||.+.++..|+++|.+.||+|.+++......... .....|++++
T Consensus 1 ~i~~i~~~~~~----gG~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~---------------------~~~~~~i~v~ 55 (365)
T cd03807 1 KVLHVITGLDV----GGAERMLVRLLKGLDRDRFEHVVISLTDRGELGE---------------------ELEEAGVPVY 55 (365)
T ss_pred CeEEEEeeccC----ccHHHHHHHHHHHhhhccceEEEEecCcchhhhH---------------------HHHhcCCeEE
Confidence 68999987644 9999999999999999999999998753211100 0001355555
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+..+... .. ......+.+.++.. +|| +||+|.+...+...
T Consensus 56 ~~~~~~~~----------------------~~----~~~~~~~~~~~~~~------------~~d-iv~~~~~~~~~~~~ 96 (365)
T cd03807 56 CLGKRPGR----------------------PD----PGALLRLYKLIRRL------------RPD-VVHTWMYHADLYGG 96 (365)
T ss_pred EEeccccc----------------------cc----HHHHHHHHHHHHhh------------CCC-EEEeccccccHHHH
Confidence 44322100 00 01112233333332 699 89998877766665
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
...... .+.+++++.|+...... .. .........+.....+|.++++|
T Consensus 97 ~~~~~~------~~~~~i~~~~~~~~~~~-------------~~-------------~~~~~~~~~~~~~~~~~~~i~~s 144 (365)
T cd03807 97 LAARLA------GVPPVIWGIRHSDLDLG-------------KK-------------STRLVARLRRLLSSFIPLIVANS 144 (365)
T ss_pred HHHHhc------CCCcEEEEecCCccccc-------------ch-------------hHhHHHHHHHHhccccCeEEecc
Confidence 555432 47899999997543110 00 00011223344556789999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+ ++.+.+ ++.+++||+|...+.+.... +...+++++++ ++.++
T Consensus 145 ~~~~~~~~~---~~~~~~------~~~vi~~~~~~~~~~~~~~~------------------~~~~~~~~~~~--~~~~~ 195 (365)
T cd03807 145 AAAAEYHQA---IGYPPK------KIVVIPNGVDTERFSPDLDA------------------RARLREELGLP--EDTFL 195 (365)
T ss_pred HHHHHHHHH---cCCChh------heeEeCCCcCHHhcCCcccc------------------hHHHHHhcCCC--CCCeE
Confidence 999999886 455544 78999999998877654321 34456777876 35589
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHH-HCC--CceEEEeccChHHHHHHHHhcCE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEI-LYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~-~~~--~~i~~~~~~~~~~~~~~l~~adi 480 (612)
|+++||+.+.||++.+++++.++.+ ++++|+++|.+.. ...+++... +.+ .++...+. .+.+..+++.||+
T Consensus 196 i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi 271 (365)
T cd03807 196 IGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPD--RANLELLALKELGLEDKVILLGE--RSDVPALLNALDV 271 (365)
T ss_pred EEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcc--hhHHHHHHHHhcCCCceEEEccc--cccHHHHHHhCCE
Confidence 9999999999999999999999866 6899999999873 233333333 332 34444432 3446679999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
+++||..|++|++++|||+||+|||+++.|+..|++.+ +|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 272 ~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~--~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~ 337 (365)
T cd03807 272 FVLSSLSEGFPNVLLEAMACGLPVVATDVGDNAELVGD--TGFLV----------PPGDPEALAEAIEALLAD--PALRQ 337 (365)
T ss_pred EEeCCccccCCcHHHHHHhcCCCEEEcCCCChHHHhhc--CCEEe----------CCCCHHHHHHHHHHHHhC--hHHHH
Confidence 99999999999999999999999999999999999987 78887 889999999999999998 45555
Q ss_pred HHHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 561 EMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 561 ~~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
++++++ +.++|||+.++++++++|+
T Consensus 338 ~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 338 ALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 555554 5788999999999999984
No 38
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=1.5e-32 Score=288.93 Aligned_cols=360 Identities=24% Similarity=0.262 Sum_probs=251.5
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..|.|. .||.+.++..|+.+|+++||+|+++++.......... +.+.+.
T Consensus 1 kIl~i~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~-----------------------~~~~~~ 55 (364)
T cd03814 1 RIAIVTDTFLPQ--VNGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA-----------------------RVVPVP 55 (364)
T ss_pred CeEEEecccCcc--ccceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC-----------------------Cceeec
Confidence 799999998885 6999999999999999999999999987432111100 000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc-hHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS-LIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~-~~~ 244 (612)
....+. +.. + ......+ ....+.++. ++|| +||+|..... ...
T Consensus 56 ~~~~~~-~~~---------~---------~~~~~~~----~~~~~~~~~------------~~pd-ii~~~~~~~~~~~~ 99 (364)
T cd03814 56 SVPLPG-YPE---------I---------RLALPPR----RRVRRLLDA------------FAPD-VVHIATPGPLGLAA 99 (364)
T ss_pred ccccCc-ccc---------e---------Eecccch----hhHHHHHHh------------cCCC-EEEEeccchhhHHH
Confidence 000000 000 0 0000000 111112222 2699 7888754332 222
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
..+... .++|+++++|+...+.. .... . ...........+..+..+|.++++
T Consensus 100 ~~~~~~-------~~~~~i~~~~~~~~~~~------~~~~-~--------------~~~~~~~~~~~~~~~~~~d~i~~~ 151 (364)
T cd03814 100 LRAARR-------LGIPVVTSYHTDFPEYL------RYYG-L--------------GPLSWLAWAYLRWFHNRADRVLVP 151 (364)
T ss_pred HHHHHH-------cCCCEEEEEecChHHHh------hhcc-c--------------chHhHhhHHHHHHHHHhCCEEEeC
Confidence 222222 58899999996432100 0000 0 000001134556677899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+...+.+.. .+.. ++.+++||+|...|.+... +...+.+++ ..+.+
T Consensus 152 s~~~~~~~~~---~~~~--------~~~~~~~g~~~~~~~~~~~-------------------~~~~~~~~~---~~~~~ 198 (364)
T cd03814 152 SPSLADELRA---RGFR--------RVRLWPRGVDTELFHPRRR-------------------DEALRARLG---PPDRP 198 (364)
T ss_pred CHHHHHHHhc---cCCC--------ceeecCCCccccccCcccc-------------------cHHHHHHhC---CCCCe
Confidence 9999986654 2322 7899999999988876532 122334444 23457
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
+|+|+||+.+.||++.+++++.++.+ ++++|+|+|.+.. ...++ ....++.+.+..+.+.+..+++.||++++
T Consensus 199 ~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~i~G~~~~--~~~~~----~~~~~v~~~g~~~~~~~~~~~~~~d~~l~ 272 (364)
T cd03814 199 VLLYVGRLAPEKNLEALLDADLPLRRRPPVRLVIVGDGPA--RARLE----ARYPNVHFLGFLDGEELAAAYASADVFVF 272 (364)
T ss_pred EEEEEeccccccCHHHHHHHHHHhhhcCCceEEEEeCCch--HHHHh----ccCCcEEEEeccCHHHHHHHHHhCCEEEE
Confidence 99999999999999999999999976 5899999999873 33333 33456777777778888899999999999
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHH
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMM 563 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~ 563 (612)
||..|+||++++|||+||+|||+++.++..|++.++.+|+++ ++.|.++++++|.+++.+ ++.+.+++
T Consensus 273 ~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~l~~~--~~~~~~~~ 340 (364)
T cd03814 273 PSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLV----------EPGDAEAFAAALAALLAD--PELRRRMA 340 (364)
T ss_pred CcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEc----------CCCCHHHHHHHHHHHHcC--HHHHHHHH
Confidence 999999999999999999999999999999999999999987 999999999999999998 66677777
Q ss_pred HHHH--HhcCCcHHHHHHHHHHHH
Q 007224 564 KNGM--AQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 564 ~~~~--~~~~sw~~~a~~~~~~y~ 585 (612)
+++. .++|+|+.++++++++|+
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 341 ARARAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHHHHhhcCHHHHHHHHHHhhC
Confidence 7663 368999999999999884
No 39
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=100.00 E-value=1.1e-32 Score=290.95 Aligned_cols=353 Identities=19% Similarity=0.255 Sum_probs=250.2
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+++++.+ ..||.+.++..|+++|.++||+|++++...+....... ......
T Consensus 1 ~il~~~~~~----~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~-----------------------~~~~~~ 53 (360)
T cd04951 1 KILYVITGL----GLGGAEKQVVDLADQFVAKGHQVAIISLTGESEVKPPI-----------------------DATIIL 53 (360)
T ss_pred CeEEEecCC----CCCCHHHHHHHHHHhcccCCceEEEEEEeCCCCccchh-----------------------hccceE
Confidence 588887653 36999999999999999999999999875321111000 000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+... + ....+......+.++++. ++|| |||+|..++.++..
T Consensus 54 ~~~~~----~---------------------~~~~~~~~~~~~~~~~~~------------~~pd-iv~~~~~~~~~~~~ 95 (360)
T cd04951 54 NLNMS----K---------------------NPLSFLLALWKLRKILRQ------------FKPD-VVHAHMFHANIFAR 95 (360)
T ss_pred Eeccc----c---------------------cchhhHHHHHHHHHHHHh------------cCCC-EEEEcccchHHHHH
Confidence 11100 0 000111111223333333 3699 99999888777666
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
+++... .+.+++++.|+....+. ......+.....++.++++|
T Consensus 96 l~~~~~------~~~~~v~~~h~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~s 138 (360)
T cd04951 96 LLRLFL------PSPPLICTAHSKNEGGR-------------------------------LRMLAYRLTDFLSDLTTNVS 138 (360)
T ss_pred HHHhhC------CCCcEEEEeeccCchhH-------------------------------HHHHHHHHHhhccCceEEEc
Confidence 666543 57899999996432110 01112233344678889999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+... .+++.+ ++.+||||+|...|.+... .+..++++++++ ++.++
T Consensus 139 ~~~~~~~~~~--~~~~~~------~~~~i~ng~~~~~~~~~~~------------------~~~~~~~~~~~~--~~~~~ 190 (360)
T cd04951 139 KEALDYFIAS--KAFNAN------KSFVVYNGIDTDRFRKDPA------------------RRLKIRNALGVK--NDTFV 190 (360)
T ss_pred HHHHHHHHhc--cCCCcc------cEEEEccccchhhcCcchH------------------HHHHHHHHcCcC--CCCEE
Confidence 9999888752 223333 8999999999887765421 244567788875 35589
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
++|+||+.+.||++.+++++.++.+ ++++|+|+|+|+ ..+.+++...+++ +++.+.+. .+.+..+|+.||++
T Consensus 191 ~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~~ 266 (360)
T cd04951 191 ILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--LRATLERLIKALGLSNRVKLLGL--RDDIAAYYNAADLF 266 (360)
T ss_pred EEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--cHHHHHHHHHhcCCCCcEEEecc--cccHHHHHHhhceE
Confidence 9999999999999999999999866 589999999988 3455666655543 34655543 23456799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
++||..|+||++++|||++|+|||+++.|++.|++.+ +|+.+ +++|+++++++|.+++++. ......
T Consensus 267 v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~--~g~~~----------~~~~~~~~~~~i~~ll~~~-~~~~~~ 333 (360)
T cd04951 267 VLSSAWEGFGLVVAEAMACELPVVATDAGGVREVVGD--SGLIV----------PISDPEALANKIDEILKMS-GEERDI 333 (360)
T ss_pred EecccccCCChHHHHHHHcCCCEEEecCCChhhEecC--CceEe----------CCCCHHHHHHHHHHHHhCC-HHHHHH
Confidence 9999999999999999999999999999999999987 68876 8899999999999999642 333333
Q ss_pred HH--HHHHHhcCCcHHHHHHHHHHHH
Q 007224 562 MM--KNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~--~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
+. ++.+.+.|||+.++++|+++|+
T Consensus 334 ~~~~~~~~~~~~s~~~~~~~~~~~y~ 359 (360)
T cd04951 334 IGARRERIVKKFSINSIVQQWLTLYT 359 (360)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHhh
Confidence 33 3446799999999999999996
No 40
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=4e-32 Score=286.34 Aligned_cols=349 Identities=21% Similarity=0.261 Sum_probs=244.2
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+.+|+|. .||.+.++..|+++|.++||+|++++......... ....+.++.
T Consensus 1 kil~i~~~~~p~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~----------------------~~~~~~~~~ 56 (357)
T cd03795 1 RVLHVGKFYPPD--RGGIEQVIRDLAEGLAARGIEVAVLCASPEPKGRD----------------------EERNGHRVI 56 (357)
T ss_pred CeeEecCCCCCC--CCcHHHHHHHHHHHHHhCCCceEEEecCCCCcchh----------------------hhccCceEE
Confidence 799999999886 89999999999999999999999999864322110 001122222
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+... ... . ... +.. . ....++.. ..+|| +||+|.........
T Consensus 57 ~~~~~--~~~-~-----~~~--------~~~---~-------~~~~~~~~----------~~~~D-ii~~~~~~~~~~~~ 99 (357)
T cd03795 57 RAPSL--LNV-A-----STP--------FSP---S-------FFKQLKKL----------AKKAD-VIHLHFPNPLADLA 99 (357)
T ss_pred Eeecc--ccc-c-----ccc--------ccH---H-------HHHHHHhc----------CCCCC-EEEEecCcchHHHH
Confidence 22110 000 0 000 000 0 00001111 13699 88988643322221
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
.+... .+.|+++++|+...... ........+++..+..+|.++++|
T Consensus 100 ~~~~~-------~~~~~i~~~h~~~~~~~---------------------------~~~~~~~~~~~~~~~~~d~vi~~s 145 (357)
T cd03795 100 LLLLP-------RKKPVVVHWHSDIVKQK---------------------------LLLKLYRPLQRRFLRRADAIVATS 145 (357)
T ss_pred HHHhc-------cCceEEEEEcChhhccc---------------------------hhhhhhhHHHHHHHHhcCEEEeCc
Confidence 11111 47899999995322110 000112234566788999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+... +... .++.+||||+|...+.+.... .. .....+ .+.+.
T Consensus 146 ~~~~~~~~~~--~~~~-------~~~~~i~~gi~~~~~~~~~~~------------------~~---~~~~~~--~~~~~ 193 (357)
T cd03795 146 PNYAETSPVL--RRFR-------DKVRVIPLGLDPARYPRPDAL------------------EE---AIWRRA--AGRPF 193 (357)
T ss_pred HHHHHHHHHh--cCCc-------cceEEecCCCChhhcCCcchh------------------hh---HhhcCC--CCCcE
Confidence 9999877642 1111 278999999999887654210 00 112222 35589
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCEEEe
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
|+|+||+.+.||++.+++++.++. +++|+|+|+|+ ....++++.++.. .++.+.+..+.+.+..+++.||++++
T Consensus 194 i~~~G~~~~~K~~~~li~a~~~l~--~~~l~i~G~g~--~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ 269 (357)
T cd03795 194 FLFVGRLVYYKGLDVLLEAAAALP--DAPLVIVGEGP--LEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVF 269 (357)
T ss_pred EEEecccccccCHHHHHHHHHhcc--CcEEEEEeCCh--hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEe
Confidence 999999999999999999999996 89999999987 5566667664443 46888777788888899999999999
Q ss_pred CCC--CCCCcHHHHHHHHcCCceEEcCCCCcccceec-CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 484 PSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 484 pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
||. .|+||++++|||+||+|||+++.++..+.+.+ +.+|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 270 ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~----------~~~d~~~~~~~i~~l~~~--~~~~~ 337 (357)
T cd03795 270 PSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVV----------PPGDPAALAEAIRRLLED--PELRE 337 (357)
T ss_pred CCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEe----------CCCCHHHHHHHHHHHHHC--HHHHH
Confidence 996 49999999999999999999999999998886 8999987 899999999999999998 55556
Q ss_pred HHHHHH---HHhcCCcHHHH
Q 007224 561 EMMKNG---MAQDLSWKGPA 577 (612)
Q Consensus 561 ~~~~~~---~~~~~sw~~~a 577 (612)
+|++++ +.+.|||+.++
T Consensus 338 ~~~~~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 338 RLGEAARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHHHHHhcchHhhC
Confidence 666555 57899999763
No 41
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=2.8e-32 Score=306.67 Aligned_cols=283 Identities=13% Similarity=0.126 Sum_probs=202.0
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEE-EEecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVF-CIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~-~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+|| |||+|.....++..++... .++|+++ +.|+... .... ..+ ..
T Consensus 400 kpD-IVH~h~~~a~~lg~lAa~~-------~gvPvIv~t~h~~~~-~~~~----------~~~---------------~~ 445 (694)
T PRK15179 400 VPS-VVHIWQDGSIFACALAALL-------AGVPRIVLSVRTMPP-VDRP----------DRY---------------RV 445 (694)
T ss_pred CCc-EEEEeCCcHHHHHHHHHHH-------cCCCEEEEEeCCCcc-ccch----------hHH---------------HH
Confidence 699 9999987777666666554 4678776 5564321 0000 000 00
Q ss_pred chhHHHHHHH--hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcch
Q 007224 307 KINWMKAGIL--ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 307 ~~~~~k~~~~--~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
........+. .++.++++|...++.+.. .+|++.+ ++.+||||+|...|.+.+..
T Consensus 446 ~~~~l~~~l~~~~~~i~Vs~S~~~~~~l~~--~~g~~~~------kI~VI~NGVd~~~f~~~~~~--------------- 502 (694)
T PRK15179 446 EYDIIYSELLKMRGVALSSNSQFAAHRYAD--WLGVDER------RIPVVYNGLAPLKSVQDDAC--------------- 502 (694)
T ss_pred HHHHHHHHHHhcCCeEEEeCcHHHHHHHHH--HcCCChh------HEEEECCCcCHHhcCCCchh---------------
Confidence 0111111222 345667777877777764 2566654 89999999998877653210
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--Cce
Q 007224 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKA 460 (612)
Q Consensus 385 ~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i 460 (612)
+. .+..+.....++.++|+++||+.++||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++..+++ +++
T Consensus 503 ---~~-~~~~~~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~--~~~~L~~l~~~lgL~~~V 576 (694)
T PRK15179 503 ---TA-MMAQFDARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGP--LLESVREFAQRLGMGERI 576 (694)
T ss_pred ---hH-HHHhhccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCc--chHHHHHHHHHcCCCCcE
Confidence 11 1111111112345799999999999999999999998864 789999999987 5677888877765 445
Q ss_pred EEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCC-
Q 007224 461 RGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVD- 539 (612)
Q Consensus 461 ~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d- 539 (612)
.+.+ +.. .+..+|+.+|++|+||.+|+||++++|||+||+|||+|+.||+.|+|.++.+|+++ +++|
T Consensus 577 ~flG-~~~-dv~~ll~aaDv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv----------~~~d~ 644 (694)
T PRK15179 577 LFTG-LSR-RVGYWLTQFNAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTL----------PADTV 644 (694)
T ss_pred EEcC-Ccc-hHHHHHHhcCEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEe----------CCCCC
Confidence 5544 433 45679999999999999999999999999999999999999999999999999987 7666
Q ss_pred -HHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 540 -VAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 540 -~~~la~~l~~ll~~~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
.++++++|.+++.+.. .+.+.+.+++.+.++|||+.++++|+++|+
T Consensus 645 ~~~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 645 TAPDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred ChHHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 4689999988887532 234444455556789999999999999995
No 42
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=100.00 E-value=4.3e-32 Score=284.60 Aligned_cols=357 Identities=18% Similarity=0.215 Sum_probs=245.0
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. ..||.+.++..|+++|+++||+|+++++............ ........ . .
T Consensus 1 kIl~i~~~~~~~-~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~------------~~~~~~~~--~---~ 62 (359)
T cd03823 1 RILVVNHLYPPR-SVGGAEVVAHDLAEALAKRGHEVAVLTAGEDPPRQDKEVI------------GVVVYGRP--I---D 62 (359)
T ss_pred CeeEEcccCCcc-cccchHHHHHHHHHHHHhcCCceEEEeCCCCCCCcccccc------------cceeeccc--c---c
Confidence 799999988774 5799999999999999999999999998743222110000 00000000 0 0
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.......... .+ .........+...+.+.++.. +|| +||+|.+.......
T Consensus 63 ~~~~~~~~~~---------~~--------~~~~~~~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~ 112 (359)
T cd03823 63 EVLRSALPRD---------LF--------HLSDYDNPAVVAEFARLLEDF------------RPD-VVHFHHLQGLGVSI 112 (359)
T ss_pred cccCCCchhh---------hh--------HHHhccCHHHHHHHHHHHHHc------------CCC-EEEECCccchHHHH
Confidence 0000000000 00 000000011223333333332 699 88998763322222
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
+....+ .++|+++++|+....... ........|.++++|
T Consensus 113 -~~~~~~-----~~~~~i~~~hd~~~~~~~-----------------------------------~~~~~~~~d~ii~~s 151 (359)
T cd03823 113 -LRAARD-----RGIPIVLTLHDYWLICPR-----------------------------------QGLFKKGGDAVIAPS 151 (359)
T ss_pred -HHHHHh-----cCCCEEEEEeeeeeecch-----------------------------------hhhhccCCCEEEEeC
Confidence 221111 478999999964321100 000011239999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+ ++... .++.+|+||+|...+.+... +. ..+.++
T Consensus 152 ~~~~~~~~~---~~~~~------~~~~vi~n~~~~~~~~~~~~---------------------------~~--~~~~~~ 193 (359)
T cd03823 152 RFLLDRYVA---NGLFA------EKISVIRNGIDLDRAKRPRR---------------------------AP--PGGRLR 193 (359)
T ss_pred HHHHHHHHH---cCCCc------cceEEecCCcChhhcccccc---------------------------CC--CCCceE
Confidence 999999886 34322 28999999999987765421 11 135578
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCC
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 485 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS 485 (612)
|+|+||+.+.||++.+++++.++.+++++|+++|.+.......... ....++...+..+.+++..+++.||++++||
T Consensus 194 i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~---~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ps 270 (359)
T cd03823 194 FGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYEL---EGDPRVEFLGAYPQEEIDDFYAEIDVLVVPS 270 (359)
T ss_pred EEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhh---cCCCeEEEeCCCCHHHHHHHHHhCCEEEEcC
Confidence 9999999999999999999999976789999999987433222221 3345677777777888889999999999999
Q ss_pred C-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007224 486 R-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 486 ~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~ 564 (612)
. .|++|++++|||+||+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.++++
T Consensus 271 ~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~--~~~~~~~~~ 338 (359)
T cd03823 271 IWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLF----------PPGDAEDLAAALERLIDD--PDLLERLRA 338 (359)
T ss_pred cccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEE----------CCCCHHHHHHHHHHHHhC--hHHHHHHHH
Confidence 8 699999999999999999999999999999999999988 999999999999999997 677777777
Q ss_pred HHHHhcCCcHHHHHHHHHHHH
Q 007224 565 NGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 565 ~~~~~~~sw~~~a~~~~~~y~ 585 (612)
++.. .++.+.++++++++|+
T Consensus 339 ~~~~-~~~~~~~~~~~~~~~~ 358 (359)
T cd03823 339 GIEP-PRSIEDQAEEYLKLYR 358 (359)
T ss_pred hHHH-hhhHHHHHHHHHHHhh
Confidence 6643 3445999999999986
No 43
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=100.00 E-value=3.3e-32 Score=286.26 Aligned_cols=367 Identities=21% Similarity=0.238 Sum_probs=246.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. .||.+.++..|+++|++.||+|+++++............ .....
T Consensus 1 kIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~~----------------------~~~~~ 56 (375)
T cd03821 1 KILHVIPSFDPK--YGGPVRVVLNLSKALAKLGHEVTVATTDAGGDPLLVALN----------------------GVPVK 56 (375)
T ss_pred CeEEEcCCCCcc--cCCeehHHHHHHHHHHhcCCcEEEEecCCCCccchhhcc----------------------Cceee
Confidence 799999988764 899999999999999999999999998643222110000 00000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecC-CccchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAND-WHTSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~-~~~~~~~ 244 (612)
.......... .... ..+........... ..++| +||+|+ |......
T Consensus 57 ~~~~~~~~~~---------------------~~~~-~~~~~~~~~~~~~~----------~~~~d-ii~~~~~~~~~~~~ 103 (375)
T cd03821 57 LFSINVAYGL---------------------NLAR-YLFPPSLLAWLRLN----------IREAD-IVHVHGLWSYPSLA 103 (375)
T ss_pred ecccchhhhh---------------------hhhh-hccChhHHHHHHHh----------CCCCC-EEEEecccchHHHH
Confidence 0000000000 0000 00000111111111 12689 889987 3332222
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
....... .++|++++.|+......... ..+.. . .......+..+..++.++++
T Consensus 104 ~~~~~~~------~~~~~i~~~~~~~~~~~~~~---------~~~~~----------~--~~~~~~~~~~~~~~~~i~~~ 156 (375)
T cd03821 104 AARAARK------YGIPYVVSPHGMLDPWALPH---------KALKK----------R--LAWFLFERRLLQAAAAVHAT 156 (375)
T ss_pred HHHHHHH------hCCCEEEEcccccccccccc---------chhhh----------H--HHHHHHHHHHHhcCCEEEEC
Confidence 2211111 47899999996432111000 00000 0 00112234556789999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|......+.. +.. ..++.+||||+|.+.|.+... ... ++..+.+ ++.+
T Consensus 157 s~~~~~~~~~----~~~------~~~~~vi~~~~~~~~~~~~~~-------------------~~~-~~~~~~~--~~~~ 204 (375)
T cd03821 157 SEQEAAEIRR----LGL------KAPIAVIPNGVDIPPFAALPS-------------------RGR-RRKFPIL--PDKR 204 (375)
T ss_pred CHHHHHHHHh----hCC------cccEEEcCCCcChhccCcchh-------------------hhh-hhhccCC--CCCc
Confidence 9877777653 111 227999999999988866421 111 4445544 4568
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi 480 (612)
+|+|+||+.+.||++.+++++.++.+ ++++|+++|.+...+...++.+..+++ .++.+.+..+.+.+..+++.||+
T Consensus 205 ~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~adv 284 (375)
T cd03821 205 IILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYGEDKAAALADADL 284 (375)
T ss_pred EEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCChHHHHHHHhhCCE
Confidence 99999999999999999999999977 699999999987666677776644443 46777777777788889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
+++||..|+||++++|||+||+|||+++.+|..|++.+ .+|+++ +.+.++++++|.+++++ ++.+.
T Consensus 285 ~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~~~i~~l~~~--~~~~~ 350 (375)
T cd03821 285 FVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVV-----------DDDVDALAAALRRALEL--PQRLK 350 (375)
T ss_pred EEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEe-----------CCChHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999999999999999999999998 788875 45669999999999998 45555
Q ss_pred HHHHHH---HHhcCCcHHHHHHHHH
Q 007224 561 EMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 561 ~~~~~~---~~~~~sw~~~a~~~~~ 582 (612)
++++++ +.++|||+.++++|++
T Consensus 351 ~~~~~~~~~~~~~~s~~~~~~~~~~ 375 (375)
T cd03821 351 AMGENGRALVEERFSWTAIAQQLLE 375 (375)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHhhC
Confidence 555544 5899999999998863
No 44
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=100.00 E-value=3.4e-32 Score=287.46 Aligned_cols=348 Identities=15% Similarity=0.116 Sum_probs=237.2
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+ + .||.+.++..++++|.++||+|+++++..... .+.. .....|+.++
T Consensus 1 kIl~~~~~~-~---~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~~~--~~~~------------------~~~~~~~~~~ 56 (358)
T cd03812 1 KILHIVGTM-N---RGGIETFIMNYYRNLDRSKIQFDFLVTSKEEG--DYDD------------------EIEKLGGKIY 56 (358)
T ss_pred CEEEEeCCC-C---CccHHHHHHHHHHhcCccceEEEEEEeCCCCc--chHH------------------HHHHcCCeEE
Confidence 799999875 3 79999999999999999999999999874321 0000 0011233333
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+... ..+... +...+.+.++. ++|| |||+|......+..
T Consensus 57 ~~~~~------------------------~~~~~~---~~~~~~~~~~~------------~~~D-vv~~~~~~~~~~~~ 96 (358)
T cd03812 57 YIPAR------------------------KKNPLK---YFKKLYKLIKK------------NKYD-IVHVHGSSASGFIL 96 (358)
T ss_pred EecCC------------------------CccHHH---HHHHHHHHHhc------------CCCC-EEEEeCcchhHHHH
Confidence 22110 001111 11222222222 3699 99999876555555
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
.+.... ....++++.|+..+...+... . .....+.+.....+|.++++|
T Consensus 97 ~~~~~~------~~~~~v~~~~~~~~~~~~~~~-----------------------~--~~~~~~~~~~~~~~~~~i~~s 145 (358)
T cd03812 97 LAAKKA------GVKVRIAHSHNTSDSHDKKKK-----------------------I--LKYKVLRKLINRLATDYLACS 145 (358)
T ss_pred HHHhhC------CCCeEEEEeccccccccccch-----------------------h--hHHHHHHHHHHhcCCEEEEcC
Confidence 544432 233456778864432111000 0 000123455667899999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+... .. ..++.+||||+|.+.|.+.... ++. +.+.+.. .+.++
T Consensus 146 ~~~~~~~~~~----~~------~~~~~vi~ngvd~~~~~~~~~~------------------~~~-~~~~~~~--~~~~~ 194 (358)
T cd03812 146 EEAGKWLFGK----VK------NKKFKVIPNGIDLEKFIFNEEI------------------RKK-RRELGIL--EDKFV 194 (358)
T ss_pred HHHHHHHHhC----CC------cccEEEEeccCcHHHcCCCchh------------------hhH-HHHcCCC--CCCEE
Confidence 9999988751 22 2389999999999887654211 111 3444443 35689
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
|+|+||+.++||++.+++++..+.+ ++++++|+|+|+ ..+.+++..++++ +++.+.+. .+.+..+|+.||++
T Consensus 195 i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~ 270 (358)
T cd03812 195 IGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE--LEEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAMDVF 270 (358)
T ss_pred EEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhcCEE
Confidence 9999999999999999999999975 699999999988 4556666665543 45655554 44566799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
|+||+.|+||++++|||++|+|||+|+.||..|++.++ .|++. .++++++++++|.+++++ ++..+.
T Consensus 271 v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~~-~~~~~----------~~~~~~~~a~~i~~l~~~--~~~~~~ 337 (358)
T cd03812 271 LFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDLTDL-VKFLS----------LDESPEIWAEEILKLKSE--DRRERS 337 (358)
T ss_pred EecccccCCCHHHHHHHHhCCCEEEEcCCchhhhhccC-ccEEe----------CCCCHHHHHHHHHHHHhC--cchhhh
Confidence 99999999999999999999999999999999999984 55554 667899999999999998 556666
Q ss_pred HHHHHHHhcCCcHHH
Q 007224 562 MMKNGMAQDLSWKGP 576 (612)
Q Consensus 562 ~~~~~~~~~~sw~~~ 576 (612)
+..++..+.-+++..
T Consensus 338 ~~~~~~~~~~~~~~~ 352 (358)
T cd03812 338 SESIKKKGLDADDEA 352 (358)
T ss_pred hhhhhhccchhhhhh
Confidence 666655444444443
No 45
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=100.00 E-value=1.1e-31 Score=282.71 Aligned_cols=341 Identities=20% Similarity=0.222 Sum_probs=247.7
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+|++..|+| |.+.++..++.+|.++||+|++++..........+. .. ..+...
T Consensus 1 ki~~~~~~~~~-----~~~~~~~~~~~~L~~~g~~v~v~~~~~~~~~~~~~~-----------------~~--~~~~~~- 55 (355)
T cd03799 1 KIAYLVKEFPR-----LSETFILREILALEAAGHEVEIFSLRPPEDTLVHPE-----------------DR--AELART- 55 (355)
T ss_pred CEEEECCCCCC-----cchHHHHHHHHHHHhCCCeEEEEEecCccccccccc-----------------cc--ccccch-
Confidence 79999988633 377899999999999999999999874322111000 00 000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
. |......+..+...+...++. .++| +||+|.+.......
T Consensus 56 -----~----------------------~~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~~~ 95 (355)
T cd03799 56 -----R----------------------YLARSLALLAQALVLARELRR------------LGID-HIHAHFGTTPATVA 95 (355)
T ss_pred -----H----------------------HHHHHHHHHHHHHHHHHHHHh------------cCCC-EEEECCCCchHHHH
Confidence 0 000111111122222222222 2699 99999765555444
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
.+.... .+.|+++++|+...... ....+++..+..+|.++++|
T Consensus 96 ~~~~~~------~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~vi~~s 138 (355)
T cd03799 96 MLASRL------GGIPYSFTAHGKDIFRS-------------------------------PDAIDLDEKLARADFVVAIS 138 (355)
T ss_pred HHHHHh------cCCCEEEEEeccccccc-------------------------------CchHHHHHHHhhCCEEEECC
Confidence 444432 47899999995332100 00135667788999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+. ++.... ++.+|+||+|.+.+.+... . ...+.+.
T Consensus 139 ~~~~~~l~~~--~~~~~~------~~~vi~~~~d~~~~~~~~~---------------------------~--~~~~~~~ 181 (355)
T cd03799 139 EYNRQQLIRL--LGCDPD------KIHVVHCGVDLERFPPRPP---------------------------P--PPGEPLR 181 (355)
T ss_pred HHHHHHHHHh--cCCCcc------cEEEEeCCcCHHHcCCccc---------------------------c--ccCCCeE
Confidence 9999999862 244433 8999999999887765420 0 1124578
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
|+|+|++.+.||++.+++++.++.+ ++++|+++|.++ ....++++..++ +.++...+..+.+++..+++.||++
T Consensus 182 i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~adi~ 259 (355)
T cd03799 182 ILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGP--LRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAADLF 259 (355)
T ss_pred EEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCc--cHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhCCEE
Confidence 9999999999999999999999876 589999999987 345566665554 3457777777778888999999999
Q ss_pred EeCCCC------CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC
Q 007224 482 LIPSRF------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 482 l~pS~~------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 555 (612)
++||.. |+||++++|||++|+|+|+++.|+..|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 260 l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~----------~~~~~~~l~~~i~~~~~~-- 327 (355)
T cd03799 260 VLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLV----------PPGDPEALADAIERLLDD-- 327 (355)
T ss_pred EecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEe----------CCCCHHHHHHHHHHHHhC--
Confidence 999999 99999999999999999999999999999999999987 888999999999999998
Q ss_pred HHHHHHHHHHH---HHhcCCcHHHHHH
Q 007224 556 TQALAEMMKNG---MAQDLSWKGPAKK 579 (612)
Q Consensus 556 ~~~~~~~~~~~---~~~~~sw~~~a~~ 579 (612)
++.+.++++++ +.++|||+..+++
T Consensus 328 ~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 328 PELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 55566666655 5689999998875
No 46
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=100.00 E-value=9.4e-33 Score=304.09 Aligned_cols=286 Identities=18% Similarity=0.229 Sum_probs=216.1
Q ss_pred CCcEEEEecCCc-cchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWH-TSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~-~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
++| |+|+|+.. .++++.+++.. .++|++++.|++....+.. ++....+.. ...+..+.+
T Consensus 173 ~~d-viH~~s~~~~g~~~~~~~~~-------~~~p~I~t~Hg~~~~e~~~--~~~~~~~~~----------~~~~~~~~~ 232 (475)
T cd03813 173 KAD-VYHAVSTGYAGLLGALAKAR-------RGTPFLLTEHGIYTRERKI--ELLQADWEM----------SYFRRLWIR 232 (475)
T ss_pred CCC-EEeccCcchHHHHHHHHHHH-------hCCCEEEecCCccHHHHHH--HHHhcccch----------HHHHHHHHH
Confidence 689 99999643 33444555544 5899999999754321110 000000000 000000001
Q ss_pred -chhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchH
Q 007224 307 -KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 307 -~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
...+.+..++.||.|+++|+..++.+.. +|.+.+ ++.+||||+|.+.|.+....
T Consensus 233 ~~~~l~~~~~~~ad~Ii~~s~~~~~~~~~---~g~~~~------ki~vIpNgid~~~f~~~~~~---------------- 287 (475)
T cd03813 233 FFESLGRLAYQAADRITTLYEGNRERQIE---DGADPE------KIRVIPNGIDPERFAPARRA---------------- 287 (475)
T ss_pred HHHHHHHHHHHhCCEEEecCHHHHHHHHH---cCCCHH------HeEEeCCCcCHHHcCCcccc----------------
Confidence 1233466778999999999999887765 676655 89999999999988765310
Q ss_pred HHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCc--hhHHHHHHHHHHHCC--Cc
Q 007224 386 LLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK--KPMEKQLEQLEILYP--EK 459 (612)
Q Consensus 386 ~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~--~~~~~~l~~l~~~~~--~~ 459 (612)
. ..++.++|+|+||+.+.||++.+++|+..+.+ ++++|+|+|.++ +.+.+.++++.++++ ++
T Consensus 288 ----------~--~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~ 355 (475)
T cd03813 288 ----------R--PEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDN 355 (475)
T ss_pred ----------c--cCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCe
Confidence 0 12355899999999999999999999999875 799999999984 457788888887765 45
Q ss_pred eEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec------CceEEEecccccccC
Q 007224 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCE 533 (612)
Q Consensus 460 i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------g~~G~l~~~~~~~~~ 533 (612)
+.+.+ .+.+..+|+.+|++++||..|+||++++|||+||+|||+|+.||+.|++.+ |.+|+++
T Consensus 356 V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~lv-------- 424 (475)
T cd03813 356 VKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVV-------- 424 (475)
T ss_pred EEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEEE--------
Confidence 66655 344567999999999999999999999999999999999999999999998 6799987
Q ss_pred CCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 534 AVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 534 ~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
++.|+++++++|.+++++ ++.+.++++++ +.+.|+|+.++++|+++|+
T Consensus 425 --~~~d~~~la~ai~~ll~~--~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 425 --PPADPEALARAILRLLKD--PELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred --CCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 999999999999999998 56666666655 5788999999999999984
No 47
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=100.00 E-value=1e-31 Score=283.75 Aligned_cols=382 Identities=20% Similarity=0.213 Sum_probs=258.3
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+..++|. .||.+.++..++++|+++||+|+++++............ ......++++++
T Consensus 1 kIl~i~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 63 (394)
T cd03794 1 KILILSQYFPPE--LGGGAFRTTELAEELVKRGHEVTVITGSPNYPSGKIYKG---------------YKREEVDGVRVH 63 (394)
T ss_pred CEEEEecccCCc--cCCcceeHHHHHHHHHhCCceEEEEecCCCccccccccc---------------ceEEecCCeEEE
Confidence 799999998885 499999999999999999999999998633221110000 111223456665
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc-cchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~-~~~~~ 244 (612)
.+........ . +......+..+.......+... ..+|| +||+|.+. ....+
T Consensus 64 ~~~~~~~~~~--------~---------~~~~~~~~~~~~~~~~~~~~~~----------~~~~D-~v~~~~~~~~~~~~ 115 (394)
T cd03794 64 RVPLPPYKKN--------G---------LLKRLLNYLSFALSALLALLKR----------RRRPD-VIIATSPPLLIALA 115 (394)
T ss_pred EEecCCCCcc--------c---------hHHHHHhhhHHHHHHHHHHHhc----------ccCCC-EEEEcCChHHHHHH
Confidence 5532211110 0 1111122222333333322211 12699 88888622 22222
Q ss_pred -HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 245 -CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 245 -~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
..++.. .++|+++++|+........ ....... .........+.+..+..+|.+++
T Consensus 116 ~~~~~~~-------~~~~~i~~~h~~~~~~~~~-----~~~~~~~------------~~~~~~~~~~~~~~~~~~d~vi~ 171 (394)
T cd03794 116 ALLLARL-------KGAPFVLEVRDLWPESAVA-----LGLLKNG------------SLLYRLLRKLERLIYRRADAIVV 171 (394)
T ss_pred HHHHHHh-------cCCCEEEEehhhcchhHHH-----ccCcccc------------chHHHHHHHHHHHHHhcCCEEEE
Confidence 222222 4889999999754311100 0000000 00001223445667889999999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
+|+..++.+.. ++.+.. ++.++|||+|...+.+.... .. +.+... .++.
T Consensus 172 ~s~~~~~~~~~---~~~~~~------~~~~i~~~~~~~~~~~~~~~-------------------~~-~~~~~~--~~~~ 220 (394)
T cd03794 172 ISPGMREYLVR---RGVPPE------KISVIPNGVDLELFKPPPAD-------------------ES-LRKELG--LDDK 220 (394)
T ss_pred ECHHHHHHHHh---cCCCcC------ceEEcCCCCCHHHcCCccch-------------------hh-hhhccC--CCCc
Confidence 99999999873 344333 89999999998877664321 00 222222 2356
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHC-CCceEEEeccChHHHHHHHHhcCEE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~-~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
++|+|+|++.++||++.+++++.++.+ ++++|+++|.|. ....++++.... ..++...+..+.+.+..+++.||++
T Consensus 221 ~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~ 298 (394)
T cd03794 221 FVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGP--EKEELKELAKALGLDNVTFLGRVPKEELPELLAAADVG 298 (394)
T ss_pred EEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcc--cHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCee
Confidence 899999999999999999999999976 489999999987 344455543332 2457777767778888999999999
Q ss_pred EeCCCCCCC-----cHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH
Q 007224 482 LIPSRFEPC-----GLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 482 l~pS~~E~~-----gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~ 556 (612)
++||..|++ |++++|||+||+|||+++.++..+++.++.+|+++ ++.|+++++++|.+++.+ +
T Consensus 299 i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~ 366 (394)
T cd03794 299 LVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVV----------PPGDPEALAAAILELLDD--P 366 (394)
T ss_pred EEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEe----------CCCCHHHHHHHHHHHHhC--h
Confidence 999998875 88899999999999999999999999998999987 889999999999999987 5
Q ss_pred HHHHHHHHHH---HHhcCCcHHHHHHHH
Q 007224 557 QALAEMMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 557 ~~~~~~~~~~---~~~~~sw~~~a~~~~ 581 (612)
+.+.++++++ ..++|||+.++++|+
T Consensus 367 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 367 EERAEMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHHHHHhhcHHHHHHhcC
Confidence 6666666655 467999999998873
No 48
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=100.00 E-value=3.1e-31 Score=276.81 Aligned_cols=367 Identities=27% Similarity=0.382 Sum_probs=261.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..++|. .||.+.++..|+++|.+.||+|.++++........... ......
T Consensus 1 kI~ii~~~~~~~--~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03801 1 KILLVTPEYPPS--VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEV----------------------GGIVVV 56 (374)
T ss_pred CeeEEecccCCc--cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeee----------------------cCccee
Confidence 799999987775 79999999999999999999999999874432221000 000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.. .. ... . ........+.......++. .++| +||+|.+.......
T Consensus 57 ~~--~~-~~~---------~----------~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~~~ 101 (374)
T cd03801 57 RP--PP-LLR---------V----------RRLLLLLLLALRLRRLLRR------------ERFD-VVHAHDWLALLAAA 101 (374)
T ss_pred cC--Cc-ccc---------c----------chhHHHHHHHHHHHHHhhh------------cCCc-EEEEechhHHHHHH
Confidence 00 00 000 0 0000111122222222222 2699 89998877666554
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
.+... .++|+++++|+..+...... . .........+.+..+..+|.++++|
T Consensus 102 ~~~~~-------~~~~~i~~~h~~~~~~~~~~---------~-------------~~~~~~~~~~~~~~~~~~d~~i~~s 152 (374)
T cd03801 102 LAARL-------LGIPLVLTVHGLEFGRPGNE---------L-------------GLLLKLARALERRALRRADRIIAVS 152 (374)
T ss_pred HHHHh-------cCCcEEEEeccchhhccccc---------h-------------hHHHHHHHHHHHHHHHhCCEEEEec
Confidence 33322 58999999997654221110 0 0001122345566788999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+. ++.+.+ ++.++|||+|...+.+.. ...+.....+ ++.+.
T Consensus 153 ~~~~~~~~~~--~~~~~~------~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~--~~~~~ 201 (374)
T cd03801 153 EATREELREL--GGVPPE------KITVIPNGVDTERFRPAP---------------------RAARRRLGIP--EDEPV 201 (374)
T ss_pred HHHHHHHHhc--CCCCCC------cEEEecCcccccccCccc---------------------hHHHhhcCCc--CCCeE
Confidence 9999999862 333222 799999999988776531 1112222222 35579
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHH--CCCceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~--~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
|+|+|++.+.||++.+++++..+.+ ++++|+++|.+. ....++++..+ .+.++...+..+.+++..+++.||++
T Consensus 202 i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~ 279 (374)
T cd03801 202 ILFVGRLVPRKGVDLLLEALAKLRKEYPDVRLVIVGDGP--LREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVF 279 (374)
T ss_pred EEEecchhhhcCHHHHHHHHHHHhhhcCCeEEEEEeCcH--HHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEE
Confidence 9999999999999999999999876 589999999776 45556655433 33567777777778888999999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
++|+..|++|++++|||++|+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++++ ++.+.+
T Consensus 280 i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~--~~~~~~ 347 (374)
T cd03801 280 VLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLV----------PPGDPEALAEAILRLLDD--PELRRR 347 (374)
T ss_pred EecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEe----------CCCCHHHHHHHHHHHHcC--hHHHHH
Confidence 99999999999999999999999999999999999999999987 898999999999999998 666666
Q ss_pred HHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 562 MMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 562 ~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
+++++ ..+.|+|+.+++++.++|+
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 348 LGEAARERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHhhC
Confidence 66665 4799999999999999873
No 49
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=100.00 E-value=2.6e-31 Score=279.70 Aligned_cols=365 Identities=23% Similarity=0.289 Sum_probs=252.9
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..|+|. .||.+..+..++++|+++||+|+++++........... .++...
T Consensus 1 kil~~~~~~~p~--~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~----------------------~~~~~~ 56 (374)
T cd03817 1 KIGIFTDTYLPQ--VNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV----------------------VVVRPF 56 (374)
T ss_pred CeeEeehhccCC--CCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc----------------------cccccc
Confidence 799999998886 89999999999999999999999999875433221000 000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc-cchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~-~~~~~ 244 (612)
..... ...+ .. .. ..+...+.+.++. ++|| +||+|... .+...
T Consensus 57 ~~~~~-~~~~---------~~------------~~-~~~~~~~~~~~~~------------~~~D-iv~~~~~~~~~~~~ 100 (374)
T cd03817 57 RVPTF-KYPD---------FR------------LP-LPIPRALIIILKE------------LGPD-IVHTHTPFSLGLLG 100 (374)
T ss_pred ccccc-hhhh---------hh------------cc-ccHHHHHHHHHhh------------cCCC-EEEECCchhhhhHH
Confidence 00000 0000 00 00 0111122222222 2699 88888632 23333
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcch-hHHHHHHHhcCEEEe
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLT 323 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ad~vi~ 323 (612)
..+... .++|+++++|+... . + .......... ...... .+++..+..+|.+++
T Consensus 101 ~~~~~~-------~~~~~i~~~~~~~~-~-~----~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~d~i~~ 154 (374)
T cd03817 101 LRVARK-------LGIPVVATYHTMYE-D-Y----THYVPLGRLL-------------ARAVVRRKLSRRFYNRCDAVIA 154 (374)
T ss_pred HHHHHH-------cCCCEEEEecCCHH-H-H----HHHHhcccch-------------hHHHHHHHHHHHHhhhCCEEEe
Confidence 333332 58899999996432 0 0 0000000000 000111 456777889999999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
+|+..++.+.. ++.. .++.++|||+|...+.+.. ....+++.+++ ++.
T Consensus 155 ~s~~~~~~~~~---~~~~-------~~~~vi~~~~~~~~~~~~~--------------------~~~~~~~~~~~--~~~ 202 (374)
T cd03817 155 PSEKIADLLRE---YGVK-------RPIEVIPTGIDLDRFEPVD--------------------GDDERRKLGIP--EDE 202 (374)
T ss_pred ccHHHHHHHHh---cCCC-------CceEEcCCccchhccCccc--------------------hhHHHHhcCCC--CCC
Confidence 99999988875 4432 2589999999998876542 12224555554 355
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcC
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~ad 479 (612)
+.|+|+|++.+.||++.+++++.++.+ ++++|+++|.++ ..+.++++..+++ .++...+..+.+.+..+++.||
T Consensus 203 ~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 280 (374)
T cd03817 203 PVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--EREELEELARELGLADRVIFTGFVPREELPDYYKAAD 280 (374)
T ss_pred eEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--hHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcC
Confidence 899999999999999999999999876 789999999987 4566666665443 4677777778888889999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 559 (612)
++++||..|++|++++|||+||+|||+++.|+..|++.++.+|+++ ++.|. +++++|.+++++ ++.+
T Consensus 281 ~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~----------~~~~~-~~~~~i~~l~~~--~~~~ 347 (374)
T cd03817 281 LFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLF----------PPGDE-ALAEALLRLLQD--PELR 347 (374)
T ss_pred EEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEe----------CCCCH-HHHHHHHHHHhC--hHHH
Confidence 9999999999999999999999999999999999999999999988 77777 999999999998 5556
Q ss_pred HHHHHHHH--HhcCCcHHHHHHHHHHHHH
Q 007224 560 AEMMKNGM--AQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 560 ~~~~~~~~--~~~~sw~~~a~~~~~~y~~ 586 (612)
.+|++++. .++++ .+++++++|++
T Consensus 348 ~~~~~~~~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 348 RRLSKNAEESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHhc
Confidence 67776663 33444 67778887765
No 50
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=100.00 E-value=1.9e-31 Score=287.38 Aligned_cols=278 Identities=12% Similarity=0.124 Sum_probs=201.5
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEE-EecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC-IHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~-iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+|| |||+|...+.+.+.+.... .++|++++ .|. .+... ..+
T Consensus 280 rpD-IVHt~~~~a~l~g~laA~l-------agvpviv~~~h~-~~~~~-----------------------------~~r 321 (578)
T PRK15490 280 KLD-YLSVWQDGACLMIALAALI-------AGVPRIQLGLRG-LPPVV-----------------------------RKR 321 (578)
T ss_pred CCC-EEEEcCcccHHHHHHHHHh-------cCCCEEEEeecc-cCCcc-----------------------------hhh
Confidence 799 9999986666666555554 47888655 553 11000 001
Q ss_pred chhHHHHHHH-------hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 307 KINWMKAGIL-------ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 307 ~~~~~k~~~~-------~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
...+....+. .+| ++++|...++.+.+ .++++.+ ++.+||||+|+..|.|..+.
T Consensus 322 ~~~~e~~~~~~a~~i~~~sd-~v~~s~~v~~~l~~--~lgip~~------KI~VIyNGVD~~rf~p~~~~---------- 382 (578)
T PRK15490 322 LFKPEYEPLYQALAVVPGVD-FMSNNHCVTRHYAD--WLKLEAK------HFQVVYNGVLPPSTEPSSEV---------- 382 (578)
T ss_pred HHHHHHHHhhhhceeEecch-hhhccHHHHHHHHH--HhCCCHH------HEEEEeCCcchhhcCccchh----------
Confidence 1111112222 334 66788888888765 2566655 89999999999988775321
Q ss_pred hhcchHHHHHHHHHH--hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHH
Q 007224 380 VMDAKPLLKEALQAE--VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEIL 455 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~--~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~ 455 (612)
....++. .+++ ++.++|+++||+.++||++.+++++.++.+ ++++|+|+|+|+ .++.++++..+
T Consensus 383 --------~~~~r~~~~~~l~--~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~~pdirLvIVGdG~--~~eeLk~la~e 450 (578)
T PRK15490 383 --------PHKIWQQFTQKTQ--DADTTIGGVFRFVGDKNPFAWIDFAARYLQHHPATRFVLVGDGD--LRAEAQKRAEQ 450 (578)
T ss_pred --------hHHHHHHhhhccC--CCCcEEEEEEEEehhcCHHHHHHHHHHHHhHCCCeEEEEEeCch--hHHHHHHHHHH
Confidence 1112222 2343 344799999999999999999999988755 789999999997 56778888777
Q ss_pred CC--CceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccC
Q 007224 456 YP--EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 533 (612)
Q Consensus 456 ~~--~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~ 533 (612)
++ +++.+.+. .+.+..+|+.+|++|+||.+|+||++++|||+||+|||+|+.||..|+|.++.+|+++
T Consensus 451 lgL~d~V~FlG~--~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LV-------- 520 (578)
T PRK15490 451 LGILERILFVGA--SRDVGYWLQKMNVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFIL-------- 520 (578)
T ss_pred cCCCCcEEECCC--hhhHHHHHHhCCEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEE--------
Confidence 65 44555543 3456679999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCHHHHHHHHHH---HHHhhC-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 007224 534 AVDPVDVAAVSTTVRR---ALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 534 ~v~~~d~~~la~~l~~---ll~~~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~ 586 (612)
++.|++++++++.. +.+... ...+.+.+++.+.++|||+.++++|+++|.+
T Consensus 521 --p~~D~~aLa~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 521 --DDAQTVNLDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred --CCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 88898888887633 333311 1223344445567999999999999999975
No 51
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=100.00 E-value=2.8e-31 Score=279.82 Aligned_cols=351 Identities=21% Similarity=0.259 Sum_probs=239.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||+||+.. .|. .||.++++..|+++|+++||+|++++........ ..... ..+....
T Consensus 1 kI~~v~~~-~~~--~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~--~~~~~------------------~~~~~~~ 57 (366)
T cd03822 1 RIALVSPY-PPR--KCGIATFTTDLVNALSARGPDVLVVSVAALYPSL--LYGGE------------------QEVVRVI 57 (366)
T ss_pred CeEEecCC-CCC--CCcHHHHHHHHHHHhhhcCCeEEEEEeecccCcc--cCCCc------------------ccceeee
Confidence 79999875 554 7999999999999999999999999876321111 00000 0000000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH-
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP- 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~- 244 (612)
.. + +...+ ..+.+.++. .+|| +||+|.|...+.+
T Consensus 58 ~~------------------~----------~~~~~----~~~~~~~~~------------~~~d-ii~~~~~~~~~~~~ 92 (366)
T cd03822 58 VL------------------D----------NPLDY----RRAARAIRL------------SGPD-VVVIQHEYGIFGGE 92 (366)
T ss_pred ec------------------C----------CchhH----HHHHHHHhh------------cCCC-EEEEeeccccccch
Confidence 00 0 00001 112222222 2699 8888875543222
Q ss_pred --HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEE
Q 007224 245 --CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 245 --~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 322 (612)
..+....+ ..++|+++++|+...... ......+++..+..+|.++
T Consensus 93 ~~~~~~~~~~----~~~~~~i~~~h~~~~~~~-----------------------------~~~~~~~~~~~~~~~d~ii 139 (366)
T cd03822 93 AGLYLLLLLR----GLGIPVVVTLHTVLLHEP-----------------------------RPGDRALLRLLLRRADAVI 139 (366)
T ss_pred hhHHHHHHHh----hcCCCEEEEEecCCcccc-----------------------------chhhhHHHHHHHhcCCEEE
Confidence 22222111 158899999997511000 0012345566788999999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~ 402 (612)
++|....+.+... .+ ..++.+|+||+|...+.+.. .. ++...+ .+
T Consensus 140 ~~s~~~~~~~~~~--~~--------~~~~~~i~~~~~~~~~~~~~---------------------~~--~~~~~~--~~ 184 (366)
T cd03822 140 VMSSELLRALLLR--AY--------PEKIAVIPHGVPDPPAEPPE---------------------SL--KALGGL--DG 184 (366)
T ss_pred EeeHHHHHHHHhh--cC--------CCcEEEeCCCCcCcccCCch---------------------hh--HhhcCC--CC
Confidence 9974444444321 11 12899999999977665431 00 222222 35
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHH---HHHHH--CCCceEEEec-cChHHHHHH
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLE---QLEIL--YPEKARGVAK-FNIPLAHMI 474 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~---~l~~~--~~~~i~~~~~-~~~~~~~~~ 474 (612)
.++|+|+||+.++||++.+++++.++.+ ++++|+|+|.+......... ++..+ ...++.+.+. .+.+++..+
T Consensus 185 ~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~ 264 (366)
T cd03822 185 RPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPEL 264 (366)
T ss_pred CeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHH
Confidence 6899999999999999999999999976 68999999998643322211 11222 3346777777 567788889
Q ss_pred HHhcCEEEeCCCCC--CCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 475 IAGADFILIPSRFE--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 475 l~~adi~l~pS~~E--~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
++.||++++||.+| ++|++++|||+||+|||+++.|+ .+.+.++.+|+++ ++.|+++++++|.++++
T Consensus 265 ~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~----------~~~d~~~~~~~l~~l~~ 333 (366)
T cd03822 265 FSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLV----------PPGDPAALAEAIRRLLA 333 (366)
T ss_pred HhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEE----------cCCCHHHHHHHHHHHHc
Confidence 99999999999999 99999999999999999999999 7878888899987 89999999999999999
Q ss_pred hhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 553 ~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~ 585 (612)
+ ++.+.+|++++. .+.|||+.++++|.++|+
T Consensus 334 ~--~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 334 D--PELAQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred C--hHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 8 566666766662 345999999999999873
No 52
>PLN02949 transferase, transferring glycosyl groups
Probab=100.00 E-value=1.1e-30 Score=284.43 Aligned_cols=229 Identities=14% Similarity=0.105 Sum_probs=181.2
Q ss_pred HHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHH
Q 007224 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l 391 (612)
+.....+|.|+++|++.++.+.+. ++.+ .++.+++||+|...+...+.
T Consensus 215 ~~~~~~ad~ii~nS~~t~~~l~~~--~~~~-------~~i~vvyp~vd~~~~~~~~~----------------------- 262 (463)
T PLN02949 215 GLVGRCAHLAMVNSSWTKSHIEAL--WRIP-------ERIKRVYPPCDTSGLQALPL----------------------- 262 (463)
T ss_pred HHHcCCCCEEEECCHHHHHHHHHH--cCCC-------CCeEEEcCCCCHHHcccCCc-----------------------
Confidence 344578999999999999998752 2321 26889999999765532110
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCc----hhHHHHHHHHHHHCC--Cc
Q 007224 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILYP--EK 459 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~~--~~ 459 (612)
...++.+.++++||++++||++.+++|+.++.+ ++++|+|+|++. ..+.+++++++.+++ ++
T Consensus 263 ------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~ 336 (463)
T PLN02949 263 ------ERSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGD 336 (463)
T ss_pred ------cccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCc
Confidence 011234789999999999999999999998643 589999999874 234567888887764 56
Q ss_pred eEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc-cceec---CceEEEecccccccCCC
Q 007224 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 460 i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~---g~~G~l~~~~~~~~~~v 535 (612)
+.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|||+++.||.. |++.+ +.+|+++
T Consensus 337 V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~---------- 406 (463)
T PLN02949 337 VEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA---------- 406 (463)
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC----------
Confidence 888877788888899999999999999999999999999999999999999875 77765 6789964
Q ss_pred CCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 536 ~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
.|+++++++|.+++++ .++.+.+|++++. .++|||+.++++|+++|++++...
T Consensus 407 --~~~~~la~ai~~ll~~-~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~~~ 461 (463)
T PLN02949 407 --TTVEEYADAILEVLRM-RETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILNSA 461 (463)
T ss_pred --CCHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhh
Confidence 4999999999999985 2444555655552 467999999999999999987543
No 53
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=100.00 E-value=1.6e-31 Score=281.55 Aligned_cols=360 Identities=19% Similarity=0.207 Sum_probs=251.3
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+.|. ..||+++++.+|+++|+++||+|+++++............ .....
T Consensus 1 ~ili~~~~~~~~-~~gG~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~---------------------~~~~~- 57 (365)
T cd03809 1 RILIDARFLASR-RPTGIGRYARELLRALLKLDPEEVLLLLPGAPGLLLLPLR---------------------AALRL- 57 (365)
T ss_pred CEEEechhhhcC-CCCcHHHHHHHHHHHHHhcCCceEEEEecCccccccccch---------------------hcccc-
Confidence 689999888772 4899999999999999999999999998754332211000 00000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
..... . ......+............. .++| +||+|.+.....
T Consensus 58 -~~~~~-~---------------------~~~~~~~~~~~~~~~~~~~~------------~~~D-ii~~~~~~~~~~-- 99 (365)
T cd03809 58 -LLRLP-R---------------------RLLWGLLFLLRAGDRLLLLL------------LGLD-LLHSPHNTAPLL-- 99 (365)
T ss_pred -ccccc-c---------------------ccccchhhHHHHHHHHHhhh------------cCCC-eeeecccccCcc--
Confidence 00000 0 00000111111111111111 2699 899987665544
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
+ ..++|+++++|+..+... + ..... ........+++..+..+|.++++|
T Consensus 100 --~--------~~~~~~i~~~hd~~~~~~-~----------~~~~~----------~~~~~~~~~~~~~~~~~d~~i~~s 148 (365)
T cd03809 100 --R--------LRGVPVVVTIHDLIPLRF-P----------EYFSP----------GFRRYFRRLLRRALRRADAIITVS 148 (365)
T ss_pred --c--------CCCCCEEEEeccchhhhC-c----------ccCCH----------HHHHHHHHHHHHHHHHcCEEEEcc
Confidence 1 168999999997543111 0 00000 001123355677888999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+. ++.+.. ++.+++||+|...+.+... .. +...... .+.++
T Consensus 149 ~~~~~~~~~~--~~~~~~------~~~vi~~~~~~~~~~~~~~-------------------~~--~~~~~~~--~~~~~ 197 (365)
T cd03809 149 EATKRDLLRY--LGVPPD------KIVVIPLGVDPRFRPPPAE-------------------AE--VLRALYL--LPRPY 197 (365)
T ss_pred HHHHHHHHHH--hCcCHH------HEEeeccccCccccCCCch-------------------HH--HHHHhcC--CCCCe
Confidence 9999999862 443333 7999999999888765431 11 2222222 35579
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccC--CcEEEEEeCCchhHHHHHHHHH-HHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLE-ILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~-~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
|+|+||+.+.||++.+++++.++.+. +++|+++|.+........+.+. .....++...+..+.+.+..+++.||+++
T Consensus 198 i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l 277 (365)
T cd03809 198 FLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAALYRGARAFV 277 (365)
T ss_pred EEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhhhhhc
Confidence 99999999999999999999999773 6999999987644444333321 12345677777778888889999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~ 562 (612)
+||.+|++|++++|||++|+|||+++.|++.|++.+ +|+++ ++.|+++++++|.+++.+ ++.+.++
T Consensus 278 ~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~~--~~~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~~ 343 (365)
T cd03809 278 FPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAGD--AALYF----------DPLDPEALAAAIERLLED--PALREEL 343 (365)
T ss_pred ccchhccCCCCHHHHhcCCCcEEecCCCCccceecC--ceeee----------CCCCHHHHHHHHHHHhcC--HHHHHHH
Confidence 999999999999999999999999999999999854 57766 888999999999999987 6667777
Q ss_pred HHHH--HHhcCCcHHHHHHHHH
Q 007224 563 MKNG--MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 563 ~~~~--~~~~~sw~~~a~~~~~ 582 (612)
++++ ..++|||+..++++++
T Consensus 344 ~~~~~~~~~~~sw~~~~~~~~~ 365 (365)
T cd03809 344 RERGLARAKRFSWEKTARRTLD 365 (365)
T ss_pred HHHHHHHHHhCCHHHHHHHHhC
Confidence 7666 4688999999998863
No 54
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=100.00 E-value=2.1e-30 Score=271.66 Aligned_cols=372 Identities=23% Similarity=0.311 Sum_probs=257.8
Q ss_pred EEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007224 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (612)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (612)
|++++..++| ...||.+.++..++.+|.+.||+|+++++.............. . ........
T Consensus 1 iLii~~~~p~-~~~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~~~~~~~~~~~------------~-----~~~~~~~~ 62 (377)
T cd03798 1 ILVISSLYPP-PNNGGGGIFVKELARALAKRGVEVTVLAPGPWGPKLLDLLKGR------------L-----VGVERLPV 62 (377)
T ss_pred CeEeccCCCC-CCCchHHHHHHHHHHHHHHCCCceEEEecCCCCCCchhhcccc------------c-----cccccccc
Confidence 5788887655 2359999999999999999999999999863322221000000 0 00000000
Q ss_pred EeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc-cchHHH
Q 007224 167 VDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIPC 245 (612)
Q Consensus 167 l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~-~~~~~~ 245 (612)
...... ..........+...+...++.. .+++| +||+|... ..++..
T Consensus 63 ---~~~~~~------------------~~~~~~~~~~~~~~~~~~l~~~----------~~~~d-ii~~~~~~~~~~~~~ 110 (377)
T cd03798 63 ---LLPVVP------------------LLKGPLLYLLAARALLKLLKLK----------RFRPD-LIHAHFAYPDGFAAA 110 (377)
T ss_pred ---Ccchhh------------------ccccchhHHHHHHHHHHHHhcc----------cCCCC-EEEEeccchHHHHHH
Confidence 000000 0011112223334444444311 23799 78877433 233333
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
.+... .++|+++++|+........ .......++..+..+|.++++|
T Consensus 111 ~~~~~-------~~~~~i~~~h~~~~~~~~~---------------------------~~~~~~~~~~~~~~~d~ii~~s 156 (377)
T cd03798 111 LLKRK-------LGIPLVVTLHGSDVNLLPR---------------------------KRLLRALLRRALRRADAVIAVS 156 (377)
T ss_pred HHHHh-------cCCCEEEEeecchhcccCc---------------------------hhhHHHHHHHHHhcCCeEEeCC
Confidence 33332 4689999999755411100 0012455677788999999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+..++.+.+ .+.+ ..++.+++||+|...+.+.... .. .+.+.. .+.+.
T Consensus 157 ~~~~~~~~~---~~~~------~~~~~~i~~~~~~~~~~~~~~~------------------~~---~~~~~~--~~~~~ 204 (377)
T cd03798 157 EALADELKA---LGID------PEKVTVIPNGVDTERFSPADRA------------------EA---RKLGLP--EDKKV 204 (377)
T ss_pred HHHHHHHHH---hcCC------CCceEEcCCCcCcccCCCcchH------------------HH---HhccCC--CCceE
Confidence 999999886 2222 2389999999999888765321 00 222322 35589
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
++++|++.+.||++.+++++..+.+ ++++++++|.+. ..+.++++.++. ..++...+..+.+++..+++.||++
T Consensus 205 i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~--~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~ 282 (377)
T cd03798 205 ILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP--LREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAADVF 282 (377)
T ss_pred EEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc--chHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcCee
Confidence 9999999999999999999999976 589999999987 344555555433 3457777777888888999999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
++||..|++|++++|||++|+|+|+++.++..|++.++.+|+++ ++.|+++++++|.+++++... .+..
T Consensus 283 i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~----------~~~~~~~l~~~i~~~~~~~~~-~~~~ 351 (377)
T cd03798 283 VLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLV----------PPGDPEALAEAILRLLADPWL-RLGR 351 (377)
T ss_pred ecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEE----------CCCCHHHHHHHHHHHhcCcHH-HHhH
Confidence 99999999999999999999999999999999999999999987 999999999999999998433 3333
Q ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHH
Q 007224 562 MMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 562 ~~~~~~~~~~sw~~~a~~~~~~y~~l 587 (612)
...+...+.|+|+..++++.++|+++
T Consensus 352 ~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 352 AARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 34444679999999999999999764
No 55
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=100.00 E-value=1.7e-30 Score=281.34 Aligned_cols=370 Identities=14% Similarity=0.072 Sum_probs=237.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
.+|++++.. .+|....+..++.+|+++||+|++++...+...+. .....|+.+
T Consensus 4 ~~~~~~~~~------~~~~~~R~~~~a~~L~~~G~~V~ii~~~~~~~~~~---------------------~~~~~~v~~ 56 (415)
T cd03816 4 KRVCVLVLG------DIGRSPRMQYHALSLAKHGWKVDLVGYLETPPHDE---------------------ILSNPNITI 56 (415)
T ss_pred cEEEEEEec------ccCCCHHHHHHHHHHHhcCceEEEEEecCCCCCHH---------------------HhcCCCEEE
Confidence 467777753 46666777889999999999999999763211110 011245666
Q ss_pred EEEeChh-hhhhhhcCCCCCcccCCCCCCCCcchhHHH-HHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc--
Q 007224 165 VFVDHPW-FLAKVVWGKTQSKIYGPRTGEDYQDNQLRF-SLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-- 240 (612)
Q Consensus 165 ~~l~~~~-~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~-- 240 (612)
+.+..+. ... ......++ .........+++.+.. ..+|| +||+|....
T Consensus 57 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~D-vi~~~~~~~~~ 108 (415)
T cd03816 57 HPLPPPPQRLN-------------------KLPFLLFAPLKVLWQFFSLLWLLYK--------LRPAD-YILIQNPPSIP 108 (415)
T ss_pred EECCCCccccc-------------------cchHHHHHHHHHHHHHHHHHHHHHh--------cCCCC-EEEEeCCCCch
Confidence 5553221 000 00111111 1111122222221110 12699 888886332
Q ss_pred -chHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcC
Q 007224 241 -SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD 319 (612)
Q Consensus 241 -~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad 319 (612)
..++.+++.. .++|+|+++|+..+.. . ..+... ..+.......+.+..++.+|
T Consensus 109 ~~~~a~~~~~~-------~~~~~V~~~h~~~~~~-~------~~~~~~------------~~~~~~~~~~~e~~~~~~ad 162 (415)
T cd03816 109 TLLIAWLYCLL-------RRTKLIIDWHNYGYTI-L------ALKLGE------------NHPLVRLAKWYEKLFGRLAD 162 (415)
T ss_pred HHHHHHHHHHH-------hCCeEEEEcCCchHHH-H------hcccCC------------CCHHHHHHHHHHHHHhhcCC
Confidence 2223333433 4789999999753210 0 000000 00000111223345567899
Q ss_pred EEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHH------
Q 007224 320 MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA------ 393 (612)
Q Consensus 320 ~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~------ 393 (612)
.|+++|+..++.+.+ +|.+.+ ++.+|+||. ...|.|.+.. .......+
T Consensus 163 ~ii~vS~~~~~~l~~---~~~~~~------ki~vI~Ng~-~~~f~p~~~~----------------~~~~~~~~~~~~~~ 216 (415)
T cd03816 163 YNLCVTKAMKEDLQQ---FNNWKI------RATVLYDRP-PEQFRPLPLE----------------EKHELFLKLAKTFL 216 (415)
T ss_pred EeeecCHHHHHHHHh---hhccCC------CeeecCCCC-HHHceeCcHH----------------HHHHHHHhcccccc
Confidence 999999999999975 565544 899999994 4556654211 00111111
Q ss_pred -------HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--------CCcEEEEEeCCchhHHHHHHHHHHHCC-
Q 007224 394 -------EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--------ENVQIIVLGTGKKPMEKQLEQLEILYP- 457 (612)
Q Consensus 394 -------~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--------~~~~lvivG~g~~~~~~~l~~l~~~~~- 457 (612)
..++.. ++..+++++||+.++||++.|++|+..+.+ ++++|+|+|+|+ .++.++++.++++
T Consensus 217 ~~~~~~~~~~~~~-~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~--~~~~l~~~~~~~~l 293 (415)
T cd03816 217 TRELRIGAVQLSE-ERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGP--LKEKYLERIKELKL 293 (415)
T ss_pred ccccccccceecC-CCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCc--cHHHHHHHHHHcCC
Confidence 112222 234678889999999999999999999853 479999999998 5677777777765
Q ss_pred CceEEEec-cChHHHHHHHHhcCEEEeCCC---CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccC
Q 007224 458 EKARGVAK-FNIPLAHMIIAGADFILIPSR---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCE 533 (612)
Q Consensus 458 ~~i~~~~~-~~~~~~~~~l~~adi~l~pS~---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~ 533 (612)
.++..+.+ .+.+.+..+|+.||++++|+. .|++|++++|||+||+|||+++.||..|+++++.+|+++
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv-------- 365 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVF-------- 365 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEE--------
Confidence 24555544 477888899999999997532 478999999999999999999999999999999999986
Q ss_pred CCCCCCHHHHHHHHHHHHHhh-CHHHHHHHHHHHH-HhcCCcHHH
Q 007224 534 AVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGM-AQDLSWKGP 576 (612)
Q Consensus 534 ~v~~~d~~~la~~l~~ll~~~-~~~~~~~~~~~~~-~~~~sw~~~ 576 (612)
+ |+++++++|.+++++. .++.+.+|++++. ...++|+..
T Consensus 366 --~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~~~~~~~ 406 (415)
T cd03816 366 --G--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESELRWDEN 406 (415)
T ss_pred --C--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhhcCHHHH
Confidence 3 8999999999999872 2567788888774 245666543
No 56
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=100.00 E-value=1.6e-30 Score=271.33 Aligned_cols=351 Identities=20% Similarity=0.208 Sum_probs=245.6
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+.. .||...++..|+++|.+.||+|+++++...... .....|++.+
T Consensus 1 kIl~i~~~------~~g~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~~~~~~~~~ 51 (359)
T cd03808 1 KILHIVTV------DGGLYSFRLPLIKALRAAGYEVHVVAPPGDELE-----------------------ELEALGVKVI 51 (359)
T ss_pred CeeEEEec------chhHHHHHHHHHHHHHhcCCeeEEEecCCCccc-----------------------ccccCCceEE
Confidence 68999875 589999999999999999999999998633211 0112344444
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+..... . . +..+.......+.+.++. ++|| +||+|.+...++..
T Consensus 52 ~~~~~~~--~-------------------~-~~~~~~~~~~~~~~~~~~------------~~~d-vv~~~~~~~~~~~~ 96 (359)
T cd03808 52 PIPLDRR--G-------------------I-NPFKDLKALLRLYRLLRK------------ERPD-IVHTHTPKPGILGR 96 (359)
T ss_pred ecccccc--c-------------------c-ChHhHHHHHHHHHHHHHh------------cCCC-EEEEccccchhHHH
Confidence 4421100 0 0 000111112223333333 3699 89999777666665
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
+..... ...++++++|+..+...... . .........+..+..+|.++++|
T Consensus 97 ~~~~~~------~~~~~i~~~~~~~~~~~~~~-----------~-------------~~~~~~~~~~~~~~~~d~ii~~s 146 (359)
T cd03808 97 LAARLA------GVPKVIYTVHGLGFVFTSGG-----------L-------------KRRLYLLLERLALRFTDKVIFQN 146 (359)
T ss_pred HHHHHc------CCCCEEEEecCcchhhccch-----------h-------------HHHHHHHHHHHHHhhccEEEEcC
Confidence 555432 46678888886543111100 0 00112234466678899999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+.+ ++.... ...+.+++||+|...+.+.... ..++.+.
T Consensus 147 ~~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~ 190 (359)
T cd03808 147 EDDRDLALK---LGIIKK----KKTVLIPGSGVDLDRFSPSPEP-----------------------------IPEDDPV 190 (359)
T ss_pred HHHHHHHHH---hcCCCc----CceEEecCCCCChhhcCccccc-----------------------------cCCCCcE
Confidence 999999886 332210 1267788999998877654210 0135589
Q ss_pred EEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHC--CCceEEEeccChHHHHHHHHhcCEE
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY--PEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~--~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
|+|+|++.+.||++.+++++..+.+ ++++|+|+|.+......... +..+. ..++.+.+. .+.+..+++.||++
T Consensus 191 i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~-~~~~~~~~~~v~~~g~--~~~~~~~~~~adi~ 267 (359)
T cd03808 191 FLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAIL-EIEKLGLEGRVEFLGF--RDDVPELLAAADVF 267 (359)
T ss_pred EEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHH-HHHhcCCcceEEEeec--cccHHHHHHhccEE
Confidence 9999999999999999999999974 78999999998743222211 12222 234555544 44566799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
++||..|++|++++|||+||+|||+++.++..|++.++.+|+++ ++.|+++++++|.+++.+ ++.+.+
T Consensus 268 i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~~~~g~~~----------~~~~~~~~~~~i~~l~~~--~~~~~~ 335 (359)
T cd03808 268 VLPSYREGLPRVLLEAMAMGRPVIATDVPGCREAVIDGVNGFLV----------PPGDAEALADAIERLIED--PELRAR 335 (359)
T ss_pred EecCcccCcchHHHHHHHcCCCEEEecCCCchhhhhcCcceEEE----------CCCCHHHHHHHHHHHHhC--HHHHHH
Confidence 99999999999999999999999999999999999999999987 899999999999999988 556666
Q ss_pred HHHHH---HHhcCCcHHHHHHHH
Q 007224 562 MMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 562 ~~~~~---~~~~~sw~~~a~~~~ 581 (612)
+++++ +.++|||+.++++|+
T Consensus 336 ~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 336 MGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHHHHHHHhcCHHHHHHHhh
Confidence 66555 578999999999886
No 57
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=100.00 E-value=1.1e-30 Score=282.91 Aligned_cols=218 Identities=17% Similarity=0.137 Sum_probs=172.8
Q ss_pred HHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHH
Q 007224 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~ 389 (612)
+++..+..+|.++++|++.++.+.+. ++.. .++.+|+||+|++.|.+...
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~~--~~~~-------~~~~vi~~gvd~~~~~~~~~--------------------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRSL--WKRN-------TKPSIVYPPCDVEELLKLPL--------------------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHHH--hCcC-------CCcEEEcCCCCHHHhccccc---------------------
Confidence 45667789999999999999998752 2221 27899999999887754321
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C-----CcEEEEEeCCch----hHHHHHHHHHHHCC-
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-----NVQIIVLGTGKK----PMEKQLEQLEILYP- 457 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~-----~~~lvivG~g~~----~~~~~l~~l~~~~~- 457 (612)
. ..++.++|+|+||+++.||++.+++|+.++.+ + +++|+|+|++.. .+.+.+++++.+++
T Consensus 232 ------~--~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l 303 (419)
T cd03806 232 ------D--EKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGL 303 (419)
T ss_pred ------c--cccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCC
Confidence 0 01245799999999999999999999999865 2 599999998742 35677888877654
Q ss_pred -CceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCc-cccee---cCceEEEeccccccc
Q 007224 458 -EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL-VDTVE---EGFTGFQMGSFSVDC 532 (612)
Q Consensus 458 -~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~-~e~v~---~g~~G~l~~~~~~~~ 532 (612)
+++.+.+..+.+++..+|+.||++++||..|+||++++|||+||+|||+++.||. .|++. ++.+|+++
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~------- 376 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA------- 376 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe-------
Confidence 4688887778888889999999999999999999999999999999999999775 57887 89999986
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCHHHHHHHH--HHHHHhcCCcHHHHH
Q 007224 533 EAVDPVDVAAVSTTVRRALATYGTQALAEMM--KNGMAQDLSWKGPAK 578 (612)
Q Consensus 533 ~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~--~~~~~~~~sw~~~a~ 578 (612)
.|+++++++|.++++++ ......+. ++...++|||+...+
T Consensus 377 -----~d~~~la~ai~~ll~~~-~~~~~~~~~~~~~~~~~fs~~~f~~ 418 (419)
T cd03806 377 -----STAEEYAEAIEKILSLS-EEERLRIRRAARSSVKRFSDEEFER 418 (419)
T ss_pred -----CCHHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHhhCHHHhcc
Confidence 39999999999999873 22222232 223568899998653
No 58
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=100.00 E-value=2.3e-32 Score=273.99 Aligned_cols=234 Identities=40% Similarity=0.683 Sum_probs=175.7
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCc-cEEEE--------EEeCCeeeEEEEEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIE--------LKVGDKIEKVRFFH 156 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~~~ 156 (612)
||+||++|+.|+.++||+++++..|+++|+++||+|+|++|.|+..++.... ....+ +.+.. ...+++++
T Consensus 1 kIl~vt~E~~P~~k~GGLgdv~~~L~kaL~~~G~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~v~~ 79 (245)
T PF08323_consen 1 KILMVTSEYAPFAKVGGLGDVVGSLPKALAKQGHDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPVGV-WYEVRVYR 79 (245)
T ss_dssp EEEEE-S-BTTTB-SSHHHHHHHHHHHHHHHTT-EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEEE-----EEEEE
T ss_pred CEEEEEcccCcccccCcHhHHHHHHHHHHHhcCCeEEEEEccchhhhhhhhcceEEEEecccccccccccc-ceEEEEEE
Confidence 7999999999999999999999999999999999999999999776665421 11111 22222 15678888
Q ss_pred eeecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEec
Q 007224 157 CHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVAN 236 (612)
Q Consensus 157 ~~~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h 236 (612)
...+|+++++++++.|+.+ ..+|++. +.+|.++..||.+||++++++++.+++ +|| |||||
T Consensus 80 ~~~~~v~v~~i~~~~~f~r-------~~iY~~~-~~~~~d~~~rf~~fs~a~le~~~~l~~----------~pD-IIH~h 140 (245)
T PF08323_consen 80 YPVDGVPVYFIDNPEYFDR-------PGIYGDN-GGDYPDNAERFAFFSRAALELLKKLGW----------KPD-IIHCH 140 (245)
T ss_dssp EEETTEEEEEEESHHHHGS-------SSSSBST-SSBHTTHHHHHHHHHHHHHHHHCTCT-----------S-S-EEEEE
T ss_pred EEcCCccEEEecChhhccc-------cceeccC-CCcchhHHHHHHHHHHHHHHHHHhhCC----------CCC-EEEec
Confidence 8889999999999999987 6699877 788999999999999999999998755 699 99999
Q ss_pred CCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHH
Q 007224 237 DWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL 316 (612)
Q Consensus 237 ~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 316 (612)
||+++++|.+++..++..+.+.++|+++|+||+.|||.++...+..+++|....... +. ......+++++.++.
T Consensus 141 DW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl~~~~~~~~---~~---~~~~~~in~lk~gi~ 214 (245)
T PF08323_consen 141 DWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGLPDEYFQNL---DE---YEFYGQINFLKAGIV 214 (245)
T ss_dssp CGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT-GGGGS-ST---TT---TEETTEEEHHHHHHH
T ss_pred CchHHHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCCCHHHhccc---cc---cccccccCHHHHHHH
Confidence 999999999999998777777899999999999999999988888889886442211 11 112347899999999
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhh
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNII 346 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~ 346 (612)
.||+|+|||+.+++++.. ..+|..++.++
T Consensus 215 ~AD~v~TVS~~Ya~Ei~~-~~~g~GL~~~l 243 (245)
T PF08323_consen 215 YADKVTTVSPTYAREIQT-PEFGEGLEGLL 243 (245)
T ss_dssp HSSEEEESSHHHHHHTTS-HHHHTT-HHHH
T ss_pred hcCEeeeCCHHHHHHHhC-cccCCChHHHh
Confidence 999999999999999987 33454555444
No 59
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=100.00 E-value=1.1e-30 Score=271.38 Aligned_cols=340 Identities=22% Similarity=0.232 Sum_probs=236.0
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+.| .||.++++..|+++|+++||+|++++..... ...+. ..+++.+.
T Consensus 1 kI~i~~~~~~~---~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~~-~~~~~---------------------~~~~~~~~ 55 (348)
T cd03820 1 KILFVIPSLGN---AGGAERVLSNLANALAEKGHEVTIISLDKGE-PPFYE---------------------LDPKIKVI 55 (348)
T ss_pred CeEEEeccccC---CCChHHHHHHHHHHHHhCCCeEEEEecCCCC-CCccc---------------------cCCcccee
Confidence 69999988765 6999999999999999999999999987432 11000 11233333
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+...... . . .........+.+.++. .+|| +|++|.+. ...
T Consensus 56 ~~~~~~~~-~---------~-------------~~~~~~~~~~~~~l~~------------~~~d-~i~~~~~~---~~~ 96 (348)
T cd03820 56 DLGDKRDS-K---------L-------------LARFKKLRRLRKLLKN------------NKPD-VVISFLTS---LLT 96 (348)
T ss_pred eccccccc-c---------h-------------hccccchHHHHHhhcc------------cCCC-EEEEcCch---HHH
Confidence 22211000 0 0 0000111122222222 3799 78887655 222
Q ss_pred HHHHhhcCCCCCCC-ceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 246 YLKTMYKPKGMYKS-AKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 246 ~l~~~~~~~~~~~~-~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
++.... .+ +|++++.|+........ .......+..++.+|.++++
T Consensus 97 ~~~~~~------~~~~~~i~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~~d~ii~~ 142 (348)
T cd03820 97 FLASLG------LKIVKLIVSEHNSPDAYKKR----------------------------LRRLLLRRLLYRRADAVVVL 142 (348)
T ss_pred HHHHHh------hccccEEEecCCCccchhhh----------------------------hHHHHHHHHHHhcCCEEEEe
Confidence 222221 23 48999999643211000 01111367778899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..+.... ... ..++.+|+||+|...+.+. ...+.+
T Consensus 143 s~~~~~~~~-----~~~------~~~~~vi~~~~~~~~~~~~--------------------------------~~~~~~ 179 (348)
T cd03820 143 TEEDRALYY-----KKF------NKNVVVIPNPLPFPPEEPS--------------------------------SDLKSK 179 (348)
T ss_pred CHHHHHHhh-----ccC------CCCeEEecCCcChhhcccc--------------------------------CCCCCc
Confidence 999872222 222 2289999999998765432 012457
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi 480 (612)
.++|+|++.+.||++.+++++.++.+ ++++|+|+|.+. ....++++..+++ .++...+. .+.+..+|+.||+
T Consensus 180 ~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ad~ 255 (348)
T cd03820 180 RILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP--EREALEALIKELGLEDRVILLGF--TKNIEEYYAKASI 255 (348)
T ss_pred EEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC--CHHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhCCE
Confidence 99999999999999999999999974 789999999987 3455555555554 23443332 4667789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 559 (612)
+++||.+|++|++++|||+||+|||+++.+ +..+++.++.+|+++ ++.|+++++++|.+++++ ++.+
T Consensus 256 ~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~----------~~~~~~~~~~~i~~ll~~--~~~~ 323 (348)
T cd03820 256 FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLV----------PNGDVEALAEALLRLMED--EELR 323 (348)
T ss_pred EEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEe----------CCCCHHHHHHHHHHHHcC--HHHH
Confidence 999999999999999999999999999975 566777777799987 999999999999999998 6667
Q ss_pred HHHHHHH--HHhcCCcHHHHHHHHH
Q 007224 560 AEMMKNG--MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 560 ~~~~~~~--~~~~~sw~~~a~~~~~ 582 (612)
.++++++ ..+.|+|+.++++|.+
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (348)
T cd03820 324 KRMGANARESAERFSIENIIKQWEE 348 (348)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHhcC
Confidence 7777665 4688999999999863
No 60
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.97 E-value=9.9e-30 Score=274.07 Aligned_cols=447 Identities=16% Similarity=0.200 Sum_probs=265.7
Q ss_pred EeccccCccccccHHHHhhhhHHHHH-hCCCeEEEEeecCCcc--cccCCccEE---EEE---EeCCeeeEEEEEEeeec
Q 007224 90 VGTEVAPWSKTGGLGDVLGGLPPALA-ANGHRVMTIAPRYDQY--KDAWDTDVV---IEL---KVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 90 v~~~~~P~~~~GG~~~~~~~La~~L~-~~Gh~V~vit~~~~~~--~~~~~~~~~---~~~---~~~~~~~~~~~~~~~~~ 160 (612)
+++|..- |.||+-+++..-|+.++ +.|-+..+|.|...+. .+....... +.. .....--.+++.+..++
T Consensus 7 ~swEV~N--KVGGIyTVi~tka~~~~~~~~d~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~g~~v~~GrW~i~ 84 (590)
T cd03793 7 VAWEVAN--KVGGIYTVIKSKAPVTVEEWGDRYCLIGPYNEAKARTEVEILEPPNPALRQALDRMRSRGIKVHFGRWLIE 84 (590)
T ss_pred Eeehhhc--cCCCeeeeeecCcHHHHHHhCCeEEEECCCCccccCCccccCCCCchHHHHHHHHHHhCCCeEEEeEEEcC
Confidence 3444333 68999999999888776 4588888888864311 111000000 000 00011124666677788
Q ss_pred CceEEEE-eChh-------hhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhh-ccCCCCCCCCCCCCcE
Q 007224 161 GVDRVFV-DHPW-------FLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRIL-NLNSNKYFSGPYGEDV 231 (612)
Q Consensus 161 gv~~~~l-~~~~-------~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~pDv 231 (612)
|-+++.+ |... ++.. .|...+ +-.+..+.+|.+. .-|...+..+++.+... .. -++|
T Consensus 85 G~P~viL~D~~~~~~~~~~~~~~-lW~~~~--i~s~~~~~d~nea-~~fgy~~~~~i~~~~~~~~~---------~~~d- 150 (590)
T cd03793 85 GYPKVVLFDIGSAAWKLDEWKGE-LWELCG--IGSPEGDRETNDA-IIFGFLVAWFLGEFAEQFDD---------EPAV- 150 (590)
T ss_pred CCCeEEEEeCchhhhhHHHHHHH-HHHHcC--CCCCCCCCcchHH-HHHHHHHHHHHHHHHhhccC---------CCCe-
Confidence 8877755 4222 2223 565444 3344444555443 34655555555444332 11 2588
Q ss_pred EEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccC-CcccccccCCCcccccccccccCCCCCc---CCcc
Q 007224 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRF-AFEDFGLLNLPAQFKSSFDFIDGYNKPV---RGRK 307 (612)
Q Consensus 232 vih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~ 307 (612)
|+|+|+|++++...+++... .++|+|||+|.+.. ||. .. |. ..+...++..++....- ....
T Consensus 151 ViH~HeWm~g~a~~~lK~~~------~~VptVfTtHAT~~-GR~l~~------g~-~~~y~~l~~~~~d~eA~~~~I~~r 216 (590)
T cd03793 151 VAHFHEWQAGVGLPLLRKRK------VDVSTIFTTHATLL-GRYLCA------GN-VDFYNNLDYFDVDKEAGKRGIYHR 216 (590)
T ss_pred EEEEcchhHhHHHHHHHHhC------CCCCEEEEeccccc-cccccc------CC-cccchhhhhcchhhhhhcccchHH
Confidence 99999999999999999643 68999999998776 653 10 10 11111111111110000 0122
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchh-hcch--
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTV-MDAK-- 384 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~-~~~~-- 384 (612)
...++.+...||+++|||+.++.++.. .++.+++ + |||||+|+..|.+..+. .++ ..++
T Consensus 217 ~~iE~~aa~~Ad~fttVS~it~~E~~~--Ll~~~pd------~--ViPNGid~~~f~~~~e~--------~~~~~~~k~k 278 (590)
T cd03793 217 YCIERAAAHCAHVFTTVSEITAYEAEH--LLKRKPD------V--VLPNGLNVKKFSALHEF--------QNLHAQSKEK 278 (590)
T ss_pred HHHHHHHHhhCCEEEECChHHHHHHHH--HhCCCCC------E--EeCCCcchhhcccchhh--------hhhhHHhhhh
Confidence 346778889999999999999999986 4677765 3 89999999998765321 000 0000
Q ss_pred --HHHHHHHHHHhCCCCCCCCcEEEE-EcCccc-ccCHHHHHHHHHhccc------CCc---EEEEEeCCc---------
Q 007224 385 --PLLKEALQAEVGLPVDRNIPVIGF-IGRLEE-QKGSDILAAAIPHFIK------ENV---QIIVLGTGK--------- 442 (612)
Q Consensus 385 --~~~k~~l~~~~gl~~~~~~~~il~-iGrl~~-~Kg~d~ll~a~~~l~~------~~~---~lvivG~g~--------- 442 (612)
......++..++++ +++++++| +||++. +||+|.||+|++++.. .+. -|+|+=.+.
T Consensus 279 i~~f~~~~~~~~~~~~--~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~ 356 (590)
T cd03793 279 INEFVRGHFYGHYDFD--LDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLK 356 (590)
T ss_pred hhHHHHHHHhhhcCCC--CCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhc
Confidence 11122345556664 34577777 799998 9999999999999965 222 233332220
Q ss_pred -hh----HHHHHHHHHH----H----------------------------------------------------------
Q 007224 443 -KP----MEKQLEQLEI----L---------------------------------------------------------- 455 (612)
Q Consensus 443 -~~----~~~~l~~l~~----~---------------------------------------------------------- 455 (612)
.. ..+.+.++.. +
T Consensus 357 g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r 436 (590)
T cd03793 357 GQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIR 436 (590)
T ss_pred chHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHH
Confidence 01 1111111100 0
Q ss_pred ---C------CCceEEEeccC-------hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCc----ccc
Q 007224 456 ---Y------PEKARGVAKFN-------IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDT 515 (612)
Q Consensus 456 ---~------~~~i~~~~~~~-------~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~ 515 (612)
+ ..+++++..|. +....+++++||++|+||.+||||++++|||+||+|+|+|+.+|+ .|+
T Consensus 437 ~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~E~ 516 (590)
T cd03793 437 RIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFMEEH 516 (590)
T ss_pred HhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhHHH
Confidence 0 01233333220 122446999999999999999999999999999999999999998 555
Q ss_pred eecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH-HHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 516 VEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 516 v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~-~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+.++ ..|+.+-+.+. .--+.++++++++|.++++...++.+.+.+. ...++.|+|+..++.|.+.|+.++.
T Consensus 517 v~~~~~~gi~V~~r~~---~~~~e~v~~La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~Al~ 589 (590)
T cd03793 517 IEDPESYGIYIVDRRF---KSPDESVQQLTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQLALS 589 (590)
T ss_pred hccCCCceEEEecCCc---cchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhh
Confidence 5544 35666511100 0014568888899988885421222222221 1357889999999999999987763
No 61
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.97 E-value=6.5e-30 Score=275.49 Aligned_cols=222 Identities=15% Similarity=0.122 Sum_probs=168.0
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+++..++.+|.++++|+..++.+.+. .+... .++.+||||+|.+.|.|.....
T Consensus 164 ~~e~~~~~~ad~vi~~S~~~~~~l~~~--~~~~~------~~v~vipngvd~~~f~~~~~~~------------------ 217 (397)
T TIGR03087 164 AYERAIAARFDAATFVSRAEAELFRRL--APEAA------GRITAFPNGVDADFFSPDRDYP------------------ 217 (397)
T ss_pred HHHHHHHhhCCeEEEcCHHHHHHHHHh--CCCCC------CCeEEeecccchhhcCCCcccc------------------
Confidence 455677889999999999999998751 22222 2789999999999887653210
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHH----HHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEE
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILA----AAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll----~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~ 462 (612)
..+ .++.++|+|+||+.++||++.++ ++++.+.+ ++++|+|+|+|+. ..++++... .++.+
T Consensus 218 ------~~~--~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~l~ivG~g~~---~~~~~l~~~--~~V~~ 284 (397)
T TIGR03087 218 ------NPY--PPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAEFYIVGAKPS---PAVRALAAL--PGVTV 284 (397)
T ss_pred ------CCC--CCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcEEEEECCCCh---HHHHHhccC--CCeEE
Confidence 001 12457899999999999999988 44555543 7899999999873 245555433 23666
Q ss_pred EeccChHHHHHHHHhcCEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHH
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 541 (612)
.+..+ .+..+|+.||++|+||+. ||+|++++|||+||+|||+|+.++ ..+..++++|+++ . +|++
T Consensus 285 ~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~-~~i~~~~~~g~lv----------~-~~~~ 350 (397)
T TIGR03087 285 TGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA-EGIDALPGAELLV----------A-ADPA 350 (397)
T ss_pred eeecC--CHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccc-ccccccCCcceEe----------C-CCHH
Confidence 65544 346799999999999985 999999999999999999999754 2333345678875 5 8999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHH
Q 007224 542 AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 542 ~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~ 585 (612)
+++++|.+++++ ++.+.+|++++ +.++|||+..+++++++|.
T Consensus 351 ~la~ai~~ll~~--~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~ 395 (397)
T TIGR03087 351 DFAAAILALLAN--PAEREELGQAARRRVLQHYHWPRNLARLDALLE 395 (397)
T ss_pred HHHHHHHHHHcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhc
Confidence 999999999998 55566666655 5689999999999999885
No 62
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.97 E-value=7.1e-29 Score=269.62 Aligned_cols=207 Identities=16% Similarity=0.126 Sum_probs=158.4
Q ss_pred cCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCC
Q 007224 318 SDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 318 ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl 397 (612)
+|.|+++|.... .+.. . .+. ..||||++.|.|... ...+.++|+
T Consensus 499 cD~VIaPS~atq-~L~~---~-----------vI~-nVnGVDte~F~P~~r--------------------~~~~r~lgi 542 (794)
T PLN02501 499 CHKVLRLSAATQ-DLPK---S-----------VIC-NVHGVNPKFLKIGEK--------------------VAEERELGQ 542 (794)
T ss_pred CCEEEcCCHHHH-Hhcc---c-----------cee-ecccccccccCCcch--------------------hHHHHhcCC
Confidence 899999997766 3321 0 222 237999999988642 122245666
Q ss_pred CCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007224 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 398 ~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l 475 (612)
+..+ +.++|+||+.++||++.|++|+..+.. ++++|+|+|+|+ .++.++++..+++..+.+.+.. +....+|
T Consensus 543 ~~~~--kgiLfVGRLa~EKGld~LLeAla~L~~~~pnvrLvIVGDGP--~reeLe~la~eLgL~V~FLG~~--dd~~~ly 616 (794)
T PLN02501 543 QAFS--KGAYFLGKMVWAKGYRELIDLLAKHKNELDGFNLDVFGNGE--DAHEVQRAAKRLDLNLNFLKGR--DHADDSL 616 (794)
T ss_pred cccc--CceEEEEcccccCCHHHHHHHHHHHHhhCCCeEEEEEcCCc--cHHHHHHHHHHcCCEEEecCCC--CCHHHHH
Confidence 5332 458999999999999999999998865 689999999998 5677888777766444444332 2234699
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 555 (612)
+.+|+||+||..|+||++++||||||+|||+++.+|. +++.++.+|++ ..|.++++++|.+++++.
T Consensus 617 asaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll------------~~D~EafAeAI~~LLsd~- 682 (794)
T PLN02501 617 HGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLT------------YKTSEDFVAKVKEALANE- 682 (794)
T ss_pred HhCCEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEe------------cCCHHHHHHHHHHHHhCc-
Confidence 9999999999999999999999999999999999985 45777888885 378999999999999983
Q ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 007224 556 TQALAEMMKNGMAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 556 ~~~~~~~~~~~~~~~~sw~~~a~~~~~~y 584 (612)
+....+.. ...|||+.+++++++.-
T Consensus 683 -~~rl~~~a---~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 683 -PQPLTPEQ---RYNLSWEAATQRFMEYS 707 (794)
T ss_pred -hhhhHHHH---HhhCCHHHHHHHHHHhh
Confidence 22222222 45899999999999865
No 63
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.97 E-value=3.4e-28 Score=252.85 Aligned_cols=334 Identities=23% Similarity=0.254 Sum_probs=224.9
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++++..+. .||.+.++..|+++|.+.||+|++++............. ... .....
T Consensus 1 kIl~~~~~~~----~gG~~~~~~~l~~~l~~~g~~v~v~~~~~~~~~~~~~~~------------~~~-------~~~~~ 57 (353)
T cd03811 1 KILFVIPSLG----GGGAERVLLNLANGLDKRGYDVTLVVLRDEGDYLELLPS------------NVK-------LIPVR 57 (353)
T ss_pred CeEEEeeccc----CCCcchhHHHHHHHHHhcCceEEEEEcCCCCcccccccc------------chh-------hhcee
Confidence 6899998642 699999999999999999999999998643222110000 000 00000
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCC-ccchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW-HTSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~-~~~~~~ 244 (612)
... . . .+ ........+.+.++.. +|| +||+|.+ ...++.
T Consensus 58 ~~~----~-~---------~~-------------~~~~~~~~~~~~~~~~------------~~d-ii~~~~~~~~~~~~ 97 (353)
T cd03811 58 VLK----L-K---------SL-------------RDLLAILRLRRLLRKE------------KPD-VVISHLTTTPNVLA 97 (353)
T ss_pred eee----c-c---------cc-------------cchhHHHHHHHHHHhc------------CCC-EEEEcCccchhHHH
Confidence 000 0 0 00 0011122233333332 699 8888876 333333
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.+.+. .++|+++++|+......... .......+..+..+|.++++
T Consensus 98 ~~~~~--------~~~~~i~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~d~ii~~ 142 (353)
T cd03811 98 LLAAR--------LGTKLIVWEHNSLSLELKRK---------------------------LRLLLLIRKLYRRADKIVAV 142 (353)
T ss_pred HHHhh--------cCCceEEEEcCcchhhhccc---------------------------hhHHHHHHhhccccceEEEe
Confidence 22221 26899999997554211100 00002456678899999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+.+. ++.+. .++.+|+||+|...+.+...+ .. ..+. ..+.+
T Consensus 143 s~~~~~~~~~~--~~~~~------~~~~vi~~~~~~~~~~~~~~~--------------------~~--~~~~--~~~~~ 190 (353)
T cd03811 143 SEGVKEDLLKL--LGIPP------DKIEVIYNPIDIEEIRALAEE--------------------PL--ELGI--PPDGP 190 (353)
T ss_pred ccchhhhHHHh--hcCCc------cccEEecCCcChhhcCcccch--------------------hh--hcCC--CCCce
Confidence 99999998862 33222 289999999998887654321 00 1222 24568
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi 480 (612)
+|+|+||+.+.||++.+++++.++.+ ++++|+++|.+. ....++++..+++ .++...+.. +.+..+++.||+
T Consensus 191 ~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~~~~~d~ 266 (353)
T cd03811 191 VILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGP--LREELEALAKELGLADRVHFLGFQ--SNPYPYLKAADL 266 (353)
T ss_pred EEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCc--cHHHHHHHHHhcCCCccEEEeccc--CCHHHHHHhCCE
Confidence 99999999999999999999999976 589999999987 3445555555543 345554442 335679999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHH---HHHHHHHHhhCHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYGTQ 557 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la---~~l~~ll~~~~~~ 557 (612)
+++||.+|++|++++|||++|+|||+++.||..|++.++.+|+++ ++.|.++++ +.+..+.++ ++
T Consensus 267 ~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~~~~~~~i~~~~~~--~~ 334 (353)
T cd03811 267 FVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLV----------PVGDEAALAAAALALLDLLLD--PE 334 (353)
T ss_pred EEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEE----------CCCCHHHHHHHHHHHHhccCC--hH
Confidence 999999999999999999999999999999999999999999988 899999995 444455544 45
Q ss_pred HHHHHHHH
Q 007224 558 ALAEMMKN 565 (612)
Q Consensus 558 ~~~~~~~~ 565 (612)
.+.+++.+
T Consensus 335 ~~~~~~~~ 342 (353)
T cd03811 335 LRERLAAA 342 (353)
T ss_pred HHHHHHHH
Confidence 55555553
No 64
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.97 E-value=1.5e-28 Score=260.02 Aligned_cols=206 Identities=20% Similarity=0.238 Sum_probs=170.5
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+.+..++.+|.++++|+..++.+.+. ++. +..+|+||+|.+.|.+..
T Consensus 145 ~~~~~~~~~~d~ii~~S~~~~~~~~~~--~~~---------~~~vi~~~~d~~~~~~~~--------------------- 192 (351)
T cd03804 145 IWDRRSAARVDYFIANSRFVARRIKKY--YGR---------DATVIYPPVDTDRFTPAE--------------------- 192 (351)
T ss_pred HHHHHHhcCCCEEEECCHHHHHHHHHH--hCC---------CcEEECCCCCHhhcCcCC---------------------
Confidence 345566789999999999999998751 221 467899999988876542
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccCh
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~ 468 (612)
...+.++|+||+.+.||++.+++|+.++. ++|+|+|+|+ ..+.+++ ....++.+.+..+.
T Consensus 193 ------------~~~~~il~~G~~~~~K~~~~li~a~~~~~---~~l~ivG~g~--~~~~l~~---~~~~~V~~~g~~~~ 252 (351)
T cd03804 193 ------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG---KRLVVIGDGP--ELDRLRA---KAGPNVTFLGRVSD 252 (351)
T ss_pred ------------CCCCEEEEEEcCccccChHHHHHHHHHCC---CcEEEEECCh--hHHHHHh---hcCCCEEEecCCCH
Confidence 12357999999999999999999999883 8999999987 3444444 34567888888888
Q ss_pred HHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHH
Q 007224 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~ 548 (612)
+++..+++.||++++||. |+||++++|||+||+|||+++.||..|++.++.+|+++ ++.|+++++++|.
T Consensus 253 ~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~----------~~~~~~~la~~i~ 321 (351)
T cd03804 253 EELRDLYARARAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILF----------EEQTVESLAAAVE 321 (351)
T ss_pred HHHHHHHHhCCEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEe----------CCCCHHHHHHHHH
Confidence 888899999999999999 99999999999999999999999999999999999987 9999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHH
Q 007224 549 RALATYGTQALAEMMKNGMAQDLSWKGPAKKW 580 (612)
Q Consensus 549 ~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~ 580 (612)
++++++. ...+++.++ .+.|+|++..+++
T Consensus 322 ~l~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 350 (351)
T cd03804 322 RFEKNED-FDPQAIRAH--AERFSESRFREKI 350 (351)
T ss_pred HHHhCcc-cCHHHHHHH--HHhcCHHHHHHHh
Confidence 9999842 333344433 3579999998875
No 65
>PHA01633 putative glycosyl transferase group 1
Probab=99.96 E-value=1.7e-27 Score=246.90 Aligned_cols=225 Identities=16% Similarity=0.224 Sum_probs=169.5
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
++....+.+.+.++++|+..++.+.+ .|++. .+ .|+||+|.+.|.|.... .
T Consensus 84 ~~y~~~m~~~~~vIavS~~t~~~L~~---~G~~~-------~i-~I~~GVD~~~f~p~~~~------------------~ 134 (335)
T PHA01633 84 EIVNKYLLQDVKFIPNSKFSAENLQE---VGLQV-------DL-PVFHGINFKIVENAEKL------------------V 134 (335)
T ss_pred HHHHHHHhcCCEEEeCCHHHHHHHHH---hCCCC-------ce-eeeCCCChhhcCccchh------------------h
Confidence 34555667788999999999999986 56552 23 47899999988775311 2
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCchhHHHHHHHHHHHCCCceEE
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~ 462 (612)
..++++++... ++.++|+++||+.++||++.|++|+.++.+ + +++++++|.+ .++++. .+.++.+
T Consensus 135 ~~~r~~~~~~~-~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~------~~~~l~--l~~~V~f 205 (335)
T PHA01633 135 PQLKQKLDKDF-PDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK------QFTQLE--VPANVHF 205 (335)
T ss_pred HHHHHHhCcCC-CCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH------HHHHcC--CCCcEEE
Confidence 34566665432 245799999999999999999999999865 3 4588888742 233322 4455766
Q ss_pred Eec--c-ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC------------------ce
Q 007224 463 VAK--F-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG------------------FT 521 (612)
Q Consensus 463 ~~~--~-~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g------------------~~ 521 (612)
.+. + +.+.+..+|+.||++|+||.+|+||++++|||+||+|||+++.||+.|++.++ .+
T Consensus 206 ~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~ 285 (335)
T PHA01633 206 VAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQ 285 (335)
T ss_pred EecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCc
Confidence 642 2 56778889999999999999999999999999999999999999999976532 23
Q ss_pred EEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHH
Q 007224 522 GFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 582 (612)
Q Consensus 522 G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~ 582 (612)
||.+ ++.|+++++++|.++++..+++.+ .+.....++.|+|+.+.++|++
T Consensus 286 g~~~----------~~~d~~~la~ai~~~~~~~~~~~~-~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 286 KWKI----------HKFQIEDMANAIILAFELQDREER-SMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred eeee----------cCCCHHHHHHHHHHHHhccChhhh-hHHHHHHHHhcCHHHHHHHhhC
Confidence 4544 889999999999999876444333 2223346799999999999974
No 66
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.96 E-value=2.1e-28 Score=268.89 Aligned_cols=224 Identities=17% Similarity=0.124 Sum_probs=173.1
Q ss_pred HHHhcCEEEecCHHHHHHHHccc-cCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHH
Q 007224 314 GILESDMVLTVSPHYAQELVSGE-DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 314 ~~~~ad~vi~vS~~~~~~l~~~~-~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~ 392 (612)
....+|.++++|+..++.+.+.. .++.. ..++.+||||++...+.|..
T Consensus 267 ~~~~~D~iI~~S~~~~~~l~~~~~~~~~~------~~ki~viP~g~~~~~~~~~~------------------------- 315 (500)
T TIGR02918 267 NADYIDFFITATDIQNQILKNQFKKYYNI------EPRIYTIPVGSLDELQYPEQ------------------------- 315 (500)
T ss_pred chhhCCEEEECCHHHHHHHHHHhhhhcCC------CCcEEEEcCCCcccccCccc-------------------------
Confidence 35578999999999888877521 12221 12789999998754433211
Q ss_pred HHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccCh
Q 007224 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNI 468 (612)
Q Consensus 393 ~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~ 468 (612)
.+....|+|+||+.+.||++.+++|+.++.+ ++++|+|+|.|+ ..+.++++..+++ +.+.+.+ +.
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~--~~~~l~~~i~~~~l~~~V~f~G-~~- 384 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGG--EKQKLQKIINENQAQDYIHLKG-HR- 384 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECch--hHHHHHHHHHHcCCCCeEEEcC-CC-
Confidence 1233689999999999999999999999865 799999999998 4577888877764 3455554 32
Q ss_pred HHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCceEEEecccc-cccCCCCCCC-HHHHHH
Q 007224 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFS-VDCEAVDPVD-VAAVST 545 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~-~~~~~v~~~d-~~~la~ 545 (612)
.+..+++.||++|+||..|+||++++|||+||+|||+++.+ |.+|+|.+|.+|+++...+ .+ ++.| ++++++
T Consensus 385 -~~~~~~~~adv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~----d~~~~~~~la~ 459 (500)
T TIGR02918 385 -NLSEVYKDYELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEED----DEDQIITALAE 459 (500)
T ss_pred -CHHHHHHhCCEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcccc----chhHHHHHHHH
Confidence 34569999999999999999999999999999999999986 8999999999999982100 00 1223 899999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHH
Q 007224 546 TVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 546 ~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l 587 (612)
+|.++++ ++.+.+|++++ .++.|||+.++++|+++++++
T Consensus 460 ~I~~ll~---~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 460 KIVEYFN---SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred HHHHHhC---hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999994 33566777776 468999999999999999764
No 67
>PHA01630 putative group 1 glycosyl transferase
Probab=99.96 E-value=4.6e-28 Score=253.49 Aligned_cols=231 Identities=14% Similarity=0.162 Sum_probs=173.5
Q ss_pred hHHHHH-HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 309 NWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 309 ~~~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
.++... ...+|.++++|+..++.+.+ .|++. +.++.+||||+|.+.|.|....
T Consensus 85 ~~~~~~~~~~ad~ii~~S~~~~~~l~~---~g~~~-----~~~i~vIpNGVd~~~f~~~~~~------------------ 138 (331)
T PHA01630 85 TALYFFRNQPVDEIVVPSQWSKNAFYT---SGLKI-----PQPIYVIPHNLNPRMFEYKPKE------------------ 138 (331)
T ss_pred HHHHHHhhccCCEEEECCHHHHHHHHH---cCCCC-----CCCEEEECCCCCHHHcCCCccc------------------
Confidence 455555 56899999999999999875 44331 1279999999999888654210
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEec
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
.++..++++.|++.++||++.|++|++++.+ ++++++++|++... ..+. ...+ + ...
T Consensus 139 ------------~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~--~~l~----~~~~-~--~~~ 197 (331)
T PHA01630 139 ------------KPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLD--PRLF----GLNG-V--KTP 197 (331)
T ss_pred ------------cCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccc--hhhc----cccc-e--ecc
Confidence 1133577788899999999999999999976 68999999976521 1111 1111 1 223
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccc---------cccCCCC
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFS---------VDCEAVD 536 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~---------~~~~~v~ 536 (612)
.+.+.+..+|+.||++++||++|+||++++|||+||+|||+|+.||+.|++.++.+|+++.... .+|..+-
T Consensus 198 v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v 277 (331)
T PHA01630 198 LPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFL 277 (331)
T ss_pred CCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccccc
Confidence 4567788899999999999999999999999999999999999999999999999999873210 1233333
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHH-HH--HHhcCCcHHHHHHHHHHHHH
Q 007224 537 PVDVAAVSTTVRRALATYGTQALAEMMK-NG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~~~~~~~~~~~~~-~~--~~~~~sw~~~a~~~~~~y~~ 586 (612)
+.|.+++++.+.+++.+..++.+.++.. ++ ..++|||+.++++|+++|++
T Consensus 278 ~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 278 DPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 4588899999999998743333333333 22 57999999999999999974
No 68
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.96 E-value=3e-27 Score=255.43 Aligned_cols=220 Identities=15% Similarity=0.143 Sum_probs=179.2
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+.+..+..+|.++++|+..++.+.+. ++...+ ++.+++||+|...+.+..
T Consensus 175 ~~~~~~~~~~d~ii~~S~~~~~~l~~~--~~~~~~------ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 175 PLRRYLLSSLDAVFPCSEQGRNYLQKR--YPAYKE------KIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred HHHHHHHhcCCEEEECCHHHHHHHHHH--CCCccc------cEEEEECCcccccccCCC---------------------
Confidence 344556789999999999999998852 454433 789999999977554321
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C--CcEEEEEeCCchhHHHHHHHHHHHCC--CceEE
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 462 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~ 462 (612)
..++.+.|+++||+.+.||++.+++|+.++.+ + +++++++|+|+ ..+.++++..+.+ .++.+
T Consensus 226 ----------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~--~~~~l~~~~~~~~~~~~V~f 293 (407)
T cd04946 226 ----------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGP--LEDTLKELAESKPENISVNF 293 (407)
T ss_pred ----------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCch--HHHHHHHHHHhcCCCceEEE
Confidence 11245789999999999999999999999976 2 57778899987 5566777765543 35777
Q ss_pred EeccChHHHHHHHHh--cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCC-CC
Q 007224 463 VAKFNIPLAHMIIAG--ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP-VD 539 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~--adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~-~d 539 (612)
.+..+.+++..+++. +|++++||..||+|++++|||+||+|||+|++||..|++.++.+|+++ ++ .|
T Consensus 294 ~G~v~~~e~~~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~----------~~~~~ 363 (407)
T cd04946 294 TGELSNSEVYKLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLL----------SKDPT 363 (407)
T ss_pred ecCCChHHHHHHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEe----------CCCCC
Confidence 777777777788875 789999999999999999999999999999999999999999999987 65 58
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHH
Q 007224 540 VAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWE 581 (612)
Q Consensus 540 ~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~ 581 (612)
+++++++|.+++++ ++.+.+|++++ +.++|+|+...+++.
T Consensus 364 ~~~la~~I~~ll~~--~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 364 PNELVSSLSKFIDN--EEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99999999999997 66666666666 579999999988875
No 69
>PLN02275 transferase, transferring glycosyl groups
Probab=99.96 E-value=9.5e-27 Score=248.57 Aligned_cols=245 Identities=14% Similarity=0.096 Sum_probs=174.3
Q ss_pred CCcEEEEecCCccc---hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcC
Q 007224 228 GEDVVFVANDWHTS---LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 304 (612)
Q Consensus 228 ~pDvvih~h~~~~~---~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 304 (612)
+|| |||+|..... +.+.++... .++|+++++|+..+. .. ..+... .....
T Consensus 100 ~~D-vV~~~~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~-~~------~~~~~~------------~~~~~ 152 (371)
T PLN02275 100 RPD-VFLVQNPPSVPTLAVVKLACWL-------RRAKFVIDWHNFGYT-LL------ALSLGR------------SHPLV 152 (371)
T ss_pred CCC-EEEEeCCCCcHHHHHHHHHHHH-------hCCCEEEEcCCccHH-HH------hcccCC------------CCHHH
Confidence 799 8999864432 222333332 478999999975321 00 000000 00001
Q ss_pred CcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcch
Q 007224 305 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 305 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
.....+++..++.+|.++++|+..++.+.+. +|+ ++.+|+||. .+.|.|....
T Consensus 153 ~~~~~~e~~~~~~ad~ii~~S~~~~~~l~~~--~g~---------~i~vi~n~~-~~~f~~~~~~--------------- 205 (371)
T PLN02275 153 RLYRWYERHYGKMADGHLCVTKAMQHELDQN--WGI---------RATVLYDQP-PEFFRPASLE--------------- 205 (371)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHh--cCC---------CeEEECCCC-HHHcCcCCch---------------
Confidence 1122345666788999999999999998751 343 268899984 4666554210
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc-------------------cCCcEEEEEeCCchhH
Q 007224 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI-------------------KENVQIIVLGTGKKPM 445 (612)
Q Consensus 385 ~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~-------------------~~~~~lvivG~g~~~~ 445 (612)
. .+.. +...+++++||+.++||++.+++|+..+. .++++|+|+|+|+ .
T Consensus 206 ----~------~~~~-~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G~--~ 272 (371)
T PLN02275 206 ----I------RLRP-NRPALVVSSTSWTPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKGP--Q 272 (371)
T ss_pred ----h------cccC-CCcEEEEEeCceeccCCHHHHHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCCC--C
Confidence 0 0111 12357889999999999999999998872 2689999999998 5
Q ss_pred HHHHHHHHHHCC-CceEEEec-cChHHHHHHHHhcCEEEeCC--C-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCc
Q 007224 446 EKQLEQLEILYP-EKARGVAK-FNIPLAHMIIAGADFILIPS--R-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF 520 (612)
Q Consensus 446 ~~~l~~l~~~~~-~~i~~~~~-~~~~~~~~~l~~adi~l~pS--~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~ 520 (612)
++.++++.++.+ .++.+... .+.+++..+|+.||++++|+ . .|++|++++|||+||+|||+++.||..|+|.++.
T Consensus 273 ~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~ 352 (371)
T PLN02275 273 KAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGK 352 (371)
T ss_pred HHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCC
Confidence 677777777665 24666554 46788889999999999863 2 3899999999999999999999999999999999
Q ss_pred eEEEecccccccCCCCCCCHHHHHHHHHHHH
Q 007224 521 TGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 521 ~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll 551 (612)
+|+++ + |+++++++|.+++
T Consensus 353 ~G~lv----------~--~~~~la~~i~~l~ 371 (371)
T PLN02275 353 NGLLF----------S--SSSELADQLLELL 371 (371)
T ss_pred CeEEE----------C--CHHHHHHHHHHhC
Confidence 99987 4 6999999998764
No 70
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.95 E-value=3e-26 Score=244.35 Aligned_cols=215 Identities=20% Similarity=0.209 Sum_probs=173.7
Q ss_pred HHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHH
Q 007224 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 311 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~ 390 (612)
+...+..+|.++++|+..++.+.+. ++.. .++.+||||++...+.+...
T Consensus 151 ~~~~~~~~d~ii~~s~~~~~~l~~~--~~~~-------~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 151 VFENLDKVDGVIVATEQQKQDLQKQ--FGNY-------NPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred HHhChhhCCEEEEccHHHHHHHHHH--hCCC-------CceEEEcccccChhhcccch----------------------
Confidence 3344678999999999999988752 2221 14889999999877655310
Q ss_pred HHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEecc
Q 007224 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKF 466 (612)
Q Consensus 391 l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~ 466 (612)
..+....++++||+.+.||++.+++++.++.. ++++|+|+|.|. ....++++..+.+ +.+...+ +
T Consensus 200 --------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~~~v~~~g-~ 268 (372)
T cd04949 200 --------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGD--EEEKLKELIEELGLEDYVFLKG-Y 268 (372)
T ss_pred --------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCc--hHHHHHHHHHHcCCcceEEEcC-C
Confidence 01244689999999999999999999999965 789999999987 3455555555543 3444443 3
Q ss_pred ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC-CcccceecCceEEEecccccccCCCCCCCHHHHHH
Q 007224 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~ 545 (612)
.+.+..+|+.||++|+||..|+||++++|||+||+|||+++.+ |..|++.++.+|+++ ++.|++++++
T Consensus 269 -~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv----------~~~d~~~la~ 337 (372)
T cd04949 269 -TRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLV----------PKGDIEALAE 337 (372)
T ss_pred -CCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEe----------CCCcHHHHHH
Confidence 3446679999999999999999999999999999999999987 899999999999987 8999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHH
Q 007224 546 TVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 580 (612)
Q Consensus 546 ~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~ 580 (612)
+|.+++.+ ++.+.++++++. .++|||+.++++|
T Consensus 338 ~i~~ll~~--~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 338 AIIELLND--PKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHcC--HHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999998 667777777774 6899999999876
No 71
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=99.94 E-value=1.2e-25 Score=245.77 Aligned_cols=291 Identities=16% Similarity=0.196 Sum_probs=202.5
Q ss_pred CcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCcc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+|.+|++||+|..++|.+++... .+.+++|.+|.. ||.... ..+ ..
T Consensus 131 ~~d~iwihDyhl~llp~~lr~~~------~~~~i~~f~Hip-----fP~~e~~~~l----------------------p~ 177 (460)
T cd03788 131 PGDLVWVHDYHLLLLPQMLRERG------PDARIGFFLHIP-----FPSSEIFRCL----------------------PW 177 (460)
T ss_pred CCCEEEEeChhhhHHHHHHHhhC------CCCeEEEEEeCC-----CCChHHHhhC----------------------CC
Confidence 43399999999999999988754 578999999942 332111 100 01
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccch--h----hhhccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGED--KGVELD--N----IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~--~----~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
...+-.++..+|.|.+.+..+.+.+.+... .+.+.. . .-+..++.+||||+|++.|.+...
T Consensus 178 ~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~~~i~~~g~~~~i~vip~GID~~~f~~~~~----------- 246 (460)
T cd03788 178 REELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDDGGVEYGGRRVRVGAFPIGIDPDAFRKLAA----------- 246 (460)
T ss_pred hHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCCceEEECCEEEEEEEEeCeEcHHHHHHHhc-----------
Confidence 223445677799999999777665443111 111100 0 001237899999999998875421
Q ss_pred hhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC----cEEEEEeCCc-------hhHH
Q 007224 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGTGK-------KPME 446 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~----~~lvivG~g~-------~~~~ 446 (612)
....++.+++..+.. +++++|+++||+++.||++.+++|++++.+ ++ ++|+++|.+. ..++
T Consensus 247 ----~~~~~~~~~~~~~~~--~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~~~~~~~l~ 320 (460)
T cd03788 247 ----SPEVQERAAELRERL--GGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTDVPEYQELR 320 (460)
T ss_pred ----CchhHHHHHHHHHhc--CCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcCcHHHHHHH
Confidence 111123333333433 356899999999999999999999998865 43 6788887532 2355
Q ss_pred HHHHHHHHHCC--------CceEEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCCCcc
Q 007224 447 KQLEQLEILYP--------EKARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLV 513 (612)
Q Consensus 447 ~~l~~l~~~~~--------~~i~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~ 513 (612)
+++++++.+.+ ..+..+. ..+.+++..+|+.||++|+||..|+||++++|||+||+| +|+|+.+|..
T Consensus 321 ~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~ 400 (460)
T cd03788 321 REVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAA 400 (460)
T ss_pred HHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccch
Confidence 56666544322 1244443 347788889999999999999999999999999999999 9999988888
Q ss_pred cceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHH
Q 007224 514 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEET 583 (612)
Q Consensus 514 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~ 583 (612)
+. +.+|+++ +|.|+++++++|.++++++ .+.+.++.+++ ...+|||+..+++++.-
T Consensus 401 ~~---~~~g~lv----------~p~d~~~la~ai~~~l~~~-~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~ 458 (460)
T cd03788 401 EE---LSGALLV----------NPYDIDEVADAIHRALTMP-LEERRERHRKLREYVRTHDVQAWANSFLDD 458 (460)
T ss_pred hh---cCCCEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHh
Confidence 77 4578987 9999999999999999874 34444444433 35789999999988754
No 72
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=99.94 E-value=8.7e-25 Score=237.51 Aligned_cols=293 Identities=17% Similarity=0.187 Sum_probs=205.1
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCccc-ccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
++|.+|.+||+|..++|.+++... .+.++.|.+|. .||..+ |..+ .
T Consensus 126 ~~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlHi-----pfP~~e~f~~l----------------------p 172 (456)
T TIGR02400 126 QPGDIVWVHDYHLMLLPAMLRELG------VQNKIGFFLHI-----PFPSSEIYRTL----------------------P 172 (456)
T ss_pred CCCCEEEEecchhhHHHHHHHhhC------CCCeEEEEEeC-----CCCChHHHhhC----------------------C
Confidence 354499999999999999999875 67899999993 333221 1111 1
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccchh-----hhhccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
....+-.++..+|.|-+.+..+++.+.+... .|.+... .-+..++.++|||+|++.|.+....
T Consensus 173 ~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~~~~~~g~~~~v~viP~GID~~~f~~~~~~---------- 242 (456)
T TIGR02400 173 WRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPNGVESGGRTVRVGAFPIGIDVDRFAEQAKK---------- 242 (456)
T ss_pred cHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCCceEECCcEEEEEEecCcCCHHHHHHHhcC----------
Confidence 2344567888999999999999887665221 1221110 0133578999999999998764211
Q ss_pred hhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeC-----Cc--hhHH
Q 007224 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGT-----GK--KPME 446 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~~~lvivG~-----g~--~~~~ 446 (612)
.......+.++++++ ++++|+++||+++.||++.+++|++++.+ + ++.|+++|. ++ ..++
T Consensus 243 --~~~~~~~~~lr~~~~-----~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~ 315 (456)
T TIGR02400 243 --PSVQKRIAELRESLK-----GRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLR 315 (456)
T ss_pred --hhHHHHHHHHHHHcC-----CCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHH
Confidence 000111224566553 55799999999999999999999999864 3 356887753 22 2344
Q ss_pred HHHHHHHHHC----CC----ceEEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCc----eEEcCCCCcc
Q 007224 447 KQLEQLEILY----PE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV----PIVASTGGLV 513 (612)
Q Consensus 447 ~~l~~l~~~~----~~----~i~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~P----vI~s~~gg~~ 513 (612)
++++++..+. +. .+.... ..+.+++..+|+.||++++||..||||++++|||+||+| +|+|+.+|..
T Consensus 316 ~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~ 395 (456)
T TIGR02400 316 RQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAA 395 (456)
T ss_pred HHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCCh
Confidence 5555553221 11 123322 346788889999999999999999999999999999999 9999998888
Q ss_pred cceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHH
Q 007224 514 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 514 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y 584 (612)
+.+. +|+++ +|.|+++++++|.++++++. +.+.++.++. ....||+...++++++-+
T Consensus 396 ~~l~---~gllV----------nP~d~~~lA~aI~~aL~~~~-~er~~r~~~~~~~v~~~~~~~W~~~~l~~l 454 (456)
T TIGR02400 396 QELN---GALLV----------NPYDIDGMADAIARALTMPL-EEREERHRAMMDKLRKNDVQRWREDFLSDL 454 (456)
T ss_pred HHhC---CcEEE----------CCCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 8774 68977 99999999999999998743 2333222222 245699999999888654
No 73
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.93 E-value=7.4e-24 Score=225.04 Aligned_cols=342 Identities=16% Similarity=0.047 Sum_probs=223.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++.. .||.......|+++|.++||+|++++.......+ .....|+++
T Consensus 2 ~~i~i~~~g------~gG~~~~~~~la~~L~~~g~ev~vv~~~~~~~~~----------------------~~~~~g~~~ 53 (357)
T PRK00726 2 KKILLAGGG------TGGHVFPALALAEELKKRGWEVLYLGTARGMEAR----------------------LVPKAGIEF 53 (357)
T ss_pred cEEEEEcCc------chHhhhHHHHHHHHHHhCCCEEEEEECCCchhhh----------------------ccccCCCcE
Confidence 899999864 5888888889999999999999999875311000 001136777
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.++.+..... ...........+...+..+.+.+. .++|| |||+|.|...+..
T Consensus 54 ~~~~~~~~~~~-----------------~~~~~l~~~~~~~~~~~~~~~~ik---------~~~pD-vv~~~~~~~~~~~ 106 (357)
T PRK00726 54 HFIPSGGLRRK-----------------GSLANLKAPFKLLKGVLQARKILK---------RFKPD-VVVGFGGYVSGPG 106 (357)
T ss_pred EEEeccCcCCC-----------------ChHHHHHHHHHHHHHHHHHHHHHH---------hcCCC-EEEECCCcchhHH
Confidence 76653321110 001111112222233333322222 23699 9999988776665
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.++... .++|++++.|+... . ...+..+..+|.+++.
T Consensus 107 ~~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~r~~~~~~d~ii~~ 143 (357)
T PRK00726 107 GLAARL-------LGIPLVIHEQNAVP----------------------------------G--LANKLLARFAKKVATA 143 (357)
T ss_pred HHHHHH-------cCCCEEEEcCCCCc----------------------------------c--HHHHHHHHHhchheEC
Confidence 554443 57899887663211 0 1123346689999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
++... .. .+. .++.+|+||+|.+.+.+.. .+++++++ ++.+
T Consensus 144 ~~~~~---~~-----~~~------~~i~vi~n~v~~~~~~~~~-----------------------~~~~~~~~--~~~~ 184 (357)
T PRK00726 144 FPGAF---PE-----FFK------PKAVVTGNPVREEILALAA-----------------------PPARLAGR--EGKP 184 (357)
T ss_pred chhhh---hc-----cCC------CCEEEECCCCChHhhcccc-----------------------hhhhccCC--CCCe
Confidence 87432 11 222 2899999999987664321 11234443 3457
Q ss_pred EEEEEcCcccccCHHHHH-HHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 405 VIGFIGRLEEQKGSDILA-AAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll-~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
+|+++|+....|+...++ +|+.++.+....++++|.|. .+...+.+ . .+.++... .+. +....+++.||+++.
T Consensus 185 ~i~~~gg~~~~~~~~~~l~~a~~~~~~~~~~~~~~G~g~--~~~~~~~~-~-~~~~v~~~-g~~-~~~~~~~~~~d~~i~ 258 (357)
T PRK00726 185 TLLVVGGSQGARVLNEAVPEALALLPEALQVIHQTGKGD--LEEVRAAY-A-AGINAEVV-PFI-DDMAAAYAAADLVIC 258 (357)
T ss_pred EEEEECCcHhHHHHHHHHHHHHHHhhhCcEEEEEcCCCc--HHHHHHHh-h-cCCcEEEe-ehH-hhHHHHHHhCCEEEE
Confidence 889999988888865555 99988855335577889887 33333333 3 44333333 333 456689999999998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCceEEEecccccccCCCCCCC--HHHHHHHHHHHHHh
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~l~~ll~~ 553 (612)
+|- +++++|||++|+|+|++..++ ..+.+.+.++|+++ ++.| +++++++|++++++
T Consensus 259 ~~g----~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~----------~~~~~~~~~l~~~i~~ll~~ 324 (357)
T PRK00726 259 RAG----ASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLI----------PQSDLTPEKLAEKLLELLSD 324 (357)
T ss_pred CCC----HHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEE----------EcccCCHHHHHHHHHHHHcC
Confidence 762 689999999999999997653 23567777889987 6666 99999999999998
Q ss_pred hCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNGM--AQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 554 ~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~ 585 (612)
++.+.+|++++. .+.++-+.+++.|+++..
T Consensus 325 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 325 --PERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred --HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 777778887764 577888888888877654
No 74
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.92 E-value=4.7e-23 Score=217.74 Aligned_cols=322 Identities=14% Similarity=0.070 Sum_probs=201.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++.+ .||-......|+++|.++||+|++++.......+ . ....|+++
T Consensus 1 ~~i~~~~g~------~~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~~~--------------------~--~~~~g~~~ 52 (348)
T TIGR01133 1 KKVVLAAGG------TGGHIFPALAVAEELIKRGVEVLWLGTKRGLEKR--------------------L--VPKAGIEF 52 (348)
T ss_pred CeEEEEeCc------cHHHHhHHHHHHHHHHhCCCEEEEEeCCCcchhc--------------------c--cccCCCce
Confidence 789988765 3444445568999999999999999864221101 0 01136666
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.++...+... ........+..+...+.++.+.+. +.+|| +||+|.+...+..
T Consensus 53 ~~i~~~~~~~~-----------------~~~~~l~~~~~~~~~~~~l~~~i~---------~~~pD-vVi~~~~~~~~~~ 105 (348)
T TIGR01133 53 YFIPVGGLRRK-----------------GSFRLIKTPLKLLKAVFQARRILK---------KFKPD-AVIGFGGYVSGPA 105 (348)
T ss_pred EEEeccCcCCC-----------------ChHHHHHHHHHHHHHHHHHHHHHH---------hcCCC-EEEEcCCcccHHH
Confidence 66542211100 011111111112222222222222 23799 8999876655554
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
..+... .++|++++.|+..+ . ...+...+.+|.++++
T Consensus 106 ~~~~~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~d~ii~~ 142 (348)
T TIGR01133 106 GLAAKL-------LGIPLFHHEQNAVP----------------------------------G--LTNKLLSRFAKKVLIS 142 (348)
T ss_pred HHHHHH-------cCCCEEEECCCCCc----------------------------------c--HHHHHHHHHhCeeEEC
Confidence 444443 46777644331100 0 1123346689999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
|+..++.+ +..+|+||+|...+.+... +++++++ ++.+
T Consensus 143 ~~~~~~~~-----------------~~~~i~n~v~~~~~~~~~~-----------------------~~~~~~~--~~~~ 180 (348)
T TIGR01133 143 FPGAKDHF-----------------EAVLVGNPVRQEIRSLPVP-----------------------RERFGLR--EGKP 180 (348)
T ss_pred chhHhhcC-----------------CceEEcCCcCHHHhcccch-----------------------hhhcCCC--CCCe
Confidence 99776654 2368999998766543210 2245665 3557
Q ss_pred EEEEEcCcccccCHHH-HHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 405 VIGFIGRLEEQKGSDI-LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~-ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
+|+++|+....|+... +++++..+.+.++++++++.+.+ .+.+++...+++ +...+.|.......+|+.||++|.
T Consensus 181 ~i~~~gg~~~~~~~~~~l~~a~~~l~~~~~~~~~~~g~~~--~~~l~~~~~~~~--l~~~v~~~~~~~~~~l~~ad~~v~ 256 (348)
T TIGR01133 181 TILVLGGSQGAKILNELVPKALAKLAEKGIQIVHQTGKND--LEKVKNVYQELG--IEAIVTFIDENMAAAYAAADLVIS 256 (348)
T ss_pred EEEEECCchhHHHHHHHHHHHHHHHhhcCcEEEEECCcch--HHHHHHHHhhCC--ceEEecCcccCHHHHHHhCCEEEE
Confidence 8999998888888654 56888888665677754443331 256666665554 333333433256689999999998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCC-------cccceecCceEEEecccccccCCCCCCC--HHHHHHHHHHHHHhh
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGG-------LVDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALATY 554 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg-------~~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~l~~ll~~~ 554 (612)
+| + |++++|||++|+|+|+++.++ ..+++.++.+|+++ ++.| +++++++|.+++++
T Consensus 257 ~~---g-~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~----------~~~~~~~~~l~~~i~~ll~~- 321 (348)
T TIGR01133 257 RA---G-ASTVAELAAAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVI----------RQKELLPEKLLEALLKLLLD- 321 (348)
T ss_pred CC---C-hhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEE----------ecccCCHHHHHHHHHHHHcC-
Confidence 65 2 789999999999999998654 23578888999987 7765 99999999999987
Q ss_pred CHHHHHHHHHHH
Q 007224 555 GTQALAEMMKNG 566 (612)
Q Consensus 555 ~~~~~~~~~~~~ 566 (612)
++.+.+|++++
T Consensus 322 -~~~~~~~~~~~ 332 (348)
T TIGR01133 322 -PANLEAMAEAA 332 (348)
T ss_pred -HHHHHHHHHHH
Confidence 77777887776
No 75
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.92 E-value=1.5e-22 Score=214.01 Aligned_cols=324 Identities=15% Similarity=0.070 Sum_probs=207.3
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
+|++.+.+ .||-..++..|+++|.++||+|++++.......+ .....|++++
T Consensus 1 ~~~~~~~~------~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~~~----------------------~~~~~~~~~~ 52 (350)
T cd03785 1 RILIAGGG------TGGHIFPALALAEELRERGAEVLFLGTKRGLEAR----------------------LVPKAGIPLH 52 (350)
T ss_pred CEEEEecC------chhhhhHHHHHHHHHHhCCCEEEEEECCCcchhh----------------------cccccCCceE
Confidence 46666654 6888888889999999999999999876321111 0011356666
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC 245 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~ 245 (612)
.+..+.+..+ ........+..+.+.+.++.+.+. +++|| +||+|.+...+...
T Consensus 53 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~i~---------~~~pD-vI~~~~~~~~~~~~ 105 (350)
T cd03785 53 TIPVGGLRRK-----------------GSLKKLKAPFKLLKGVLQARKILK---------KFKPD-VVVGFGGYVSGPVG 105 (350)
T ss_pred EEEecCcCCC-----------------ChHHHHHHHHHHHHHHHHHHHHHH---------hcCCC-EEEECCCCcchHHH
Confidence 5543211111 001111111112222222222221 23799 88888766554444
Q ss_pred HHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecC
Q 007224 246 YLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVS 325 (612)
Q Consensus 246 ~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS 325 (612)
++.+. .++|++++.|+... . .+.+.....+|.++++|
T Consensus 106 ~~a~~-------~~~p~v~~~~~~~~----------------------------------~--~~~~~~~~~~~~vi~~s 142 (350)
T cd03785 106 LAAKL-------LGIPLVIHEQNAVP----------------------------------G--LANRLLARFADRVALSF 142 (350)
T ss_pred HHHHH-------hCCCEEEEcCCCCc----------------------------------c--HHHHHHHHhhCEEEEcc
Confidence 44433 47888876553110 0 11233455699999999
Q ss_pred HHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcE
Q 007224 326 PHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPV 405 (612)
Q Consensus 326 ~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~ 405 (612)
+...+.+ + ..++.+|+||+|.+.+.+.. . +++++++. +.++
T Consensus 143 ~~~~~~~--------~------~~~~~~i~n~v~~~~~~~~~----------------------~-~~~~~~~~--~~~~ 183 (350)
T cd03785 143 PETAKYF--------P------KDKAVVTGNPVREEILALDR----------------------E-RARLGLRP--GKPT 183 (350)
T ss_pred hhhhhcC--------C------CCcEEEECCCCchHHhhhhh----------------------h-HHhcCCCC--CCeE
Confidence 9877651 1 12889999999987664321 1 55666653 4578
Q ss_pred EEEEcCcccccCHH-HHHHHHHhcccCCcEE-EEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 406 IGFIGRLEEQKGSD-ILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 406 il~iGrl~~~Kg~d-~ll~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
++++|+....|+.+ .+++++..+.++++++ +++|+|. .+.+++...++..++...+.. +...++|+.||+++.
T Consensus 184 i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~---~~~l~~~~~~~~~~v~~~g~~--~~~~~~l~~ad~~v~ 258 (350)
T cd03785 184 LLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGD---LEEVKKAYEELGVNYEVFPFI--DDMAAAYAAADLVIS 258 (350)
T ss_pred EEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCcc---HHHHHHHHhccCCCeEEeehh--hhHHHHHHhcCEEEE
Confidence 88888877777765 4568888886566764 4678773 344555555444456555443 456679999999998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCC--------cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHHh
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGG--------LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg--------~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~~ 553 (612)
+|- +++++|||++|+|+|+++.++ ..+.+.+..+|+++ ++. |+++++++|.+++++
T Consensus 259 ~sg----~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v----------~~~~~~~~~l~~~i~~ll~~ 324 (350)
T cd03785 259 RAG----ASTVAELAALGLPAILIPLPYAADDHQTANARALVKAGAAVLI----------PQEELTPERLAAALLELLSD 324 (350)
T ss_pred CCC----HhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEE----------ecCCCCHHHHHHHHHHHhcC
Confidence 762 689999999999999987654 24667777899987 665 899999999999987
Q ss_pred hCHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNGM 567 (612)
Q Consensus 554 ~~~~~~~~~~~~~~ 567 (612)
++.+++|++++.
T Consensus 325 --~~~~~~~~~~~~ 336 (350)
T cd03785 325 --PERLKAMAEAAR 336 (350)
T ss_pred --HHHHHHHHHHHH
Confidence 677778877764
No 76
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.91 E-value=1.6e-21 Score=209.00 Aligned_cols=220 Identities=13% Similarity=0.087 Sum_probs=158.7
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
.+.+|.++++|+..++.+.+ +|++.+ ++.++.|.++.. |.+..+ +..++++
T Consensus 145 ~~~ad~i~~~s~~~~~~l~~---~gi~~~------ki~v~G~p~~~~-f~~~~~-------------------~~~~~~~ 195 (380)
T PRK13609 145 HREVDRYFVATDHVKKVLVD---IGVPPE------QVVETGIPIRSS-FELKIN-------------------PDIIYNK 195 (380)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCChh------HEEEECcccChH-HcCcCC-------------------HHHHHHH
Confidence 45799999999999999986 677655 677766655432 222111 3346788
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHH
Q 007224 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMI 474 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~ 474 (612)
+|++.+. ..++++.|++...|+++.+++++.+. ++++++++|.+....++.++++..+.+.++...+.. . ...++
T Consensus 196 ~~l~~~~-~~il~~~G~~~~~k~~~~li~~l~~~--~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~-~-~~~~l 270 (380)
T PRK13609 196 YQLCPNK-KILLIMAGAHGVLGNVKELCQSLMSV--PDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYV-E-NIDEL 270 (380)
T ss_pred cCCCCCC-cEEEEEcCCCCCCcCHHHHHHHHhhC--CCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEech-h-hHHHH
Confidence 8887432 23555678888899999999988754 689998876444345677777776666557666433 2 35679
Q ss_pred HHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CCCcc----cceecCceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 475 l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
|+.||+++. ++.|++++|||+||+|+|+++ .+|.. +.+.+ +|+.+ ...|+++++++|.+
T Consensus 271 ~~~aD~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~--~G~~~----------~~~~~~~l~~~i~~ 334 (380)
T PRK13609 271 FRVTSCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER--KGAAV----------VIRDDEEVFAKTEA 334 (380)
T ss_pred HHhccEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh--CCcEE----------EECCHHHHHHHHHH
Confidence 999999884 567999999999999999986 45532 23332 34433 45799999999999
Q ss_pred HHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHH
Q 007224 550 ALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~ 586 (612)
++++ ++.+.+|++++. .+.++++.+++.+++++..
T Consensus 335 ll~~--~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~ 371 (380)
T PRK13609 335 LLQD--DMKLLQMKEAMKSLYLPEPADHIVDDILAENHV 371 (380)
T ss_pred HHCC--HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhh
Confidence 9998 677778877763 4668999999999888754
No 77
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.90 E-value=3.6e-22 Score=229.82 Aligned_cols=319 Identities=17% Similarity=0.209 Sum_probs=215.8
Q ss_pred hhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCC
Q 007224 197 NQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA 276 (612)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~ 276 (612)
.+..|....+...+.+..+ +++|.+|..||+|..++|.+|+... .++++.|.+|. .||
T Consensus 126 ~w~~Y~~vN~~FA~~i~~~-----------~~~~d~vWvhDYhL~llp~~lR~~~------~~~~igfFlHi-----PFP 183 (797)
T PLN03063 126 QYDAYKKANRMFLDVVKEN-----------YEEGDVVWCHDYHLMFLPQYLKEYN------NKMKVGWFLHT-----PFP 183 (797)
T ss_pred HHHHHHHHHHHHHHHHHHh-----------cCCCCEEEEecchhhhHHHHHHHhC------CCCcEEEEecC-----CCC
Confidence 3444555555544444332 2344499999999999999999875 78999999994 333
Q ss_pred cccc-cccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccc--hhh---hhc
Q 007224 277 FEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNI---IRK 348 (612)
Q Consensus 277 ~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~---~~~ 348 (612)
...+ ..+ .....+-.++..||.|-+.+..+++.+.+... .|.+. ..+ -+.
T Consensus 184 s~e~fr~l----------------------p~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~~i~~~gr~ 241 (797)
T PLN03063 184 SSEIYKTL----------------------PSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHEGVVDQGKV 241 (797)
T ss_pred CHHHHhhC----------------------CCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCCceEECCeE
Confidence 2211 111 01234456788999999999988887664111 12111 001 112
Q ss_pred cCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhc
Q 007224 349 TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHF 428 (612)
Q Consensus 349 ~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l 428 (612)
.++.+||||||++.|.+.... .........+++.++ ++++|+++||+++.||++.+++|++++
T Consensus 242 ~~I~viP~GID~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Afe~l 304 (797)
T PLN03063 242 TRVAVFPIGIDPERFINTCEL------------PEVKQHMKELKRFFA-----GRKVILGVDRLDMIKGIPQKYLAFEKF 304 (797)
T ss_pred EEEEEEecccCHHHHHHHhcC------------hhHHHHHHHHHHhcC-----CCeEEEEecccccccCHHHHHHHHHHH
Confidence 478999999999988654210 000011223444443 457999999999999999999999998
Q ss_pred cc--CC----cEEEEEeC-----Cc--hhHHHHHHHHHHHCCCc--------eEEEe-ccChHHHHHHHHhcCEEEeCCC
Q 007224 429 IK--EN----VQIIVLGT-----GK--KPMEKQLEQLEILYPEK--------ARGVA-KFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 429 ~~--~~----~~lvivG~-----g~--~~~~~~l~~l~~~~~~~--------i~~~~-~~~~~~~~~~l~~adi~l~pS~ 486 (612)
.+ ++ +.|++++. ++ ..++++++++....+.+ +.... ..+.+++..+|+.||++|+||.
T Consensus 305 L~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSl 384 (797)
T PLN03063 305 LEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSL 384 (797)
T ss_pred HHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCcc
Confidence 65 44 44554442 22 12445555554222111 11222 3466788889999999999999
Q ss_pred CCCCcHHHHHHHHcCCc----eEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007224 487 FEPCGLIQLHAMRYGTV----PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 487 ~E~~gl~~lEAma~G~P----vI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~ 562 (612)
.||+|++.+|||+||+| +|+|..+|..+.+ +.+|+++ +|.|+++++++|.++++.+ ++.++++
T Consensus 385 rEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r 451 (797)
T PLN03063 385 RDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGALLV----------NPWNITEVSSAIKEALNMS-DEERETR 451 (797)
T ss_pred ccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCeEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHH
Confidence 99999999999999999 9999999998876 4468987 9999999999999999953 3333333
Q ss_pred HHHH--HHhcCCcHHHHHHHHHHHHHHHH
Q 007224 563 MKNG--MAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 563 ~~~~--~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
.+.. ....++|...++.+++.|+++..
T Consensus 452 ~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~ 480 (797)
T PLN03063 452 HRHNFQYVKTHSAQKWADDFMSELNDIIV 480 (797)
T ss_pred HHHHHHhhhhCCHHHHHHHHHHHHHHHhh
Confidence 2222 46789999999999998887764
No 78
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=99.89 E-value=5.3e-22 Score=228.64 Aligned_cols=297 Identities=17% Similarity=0.246 Sum_probs=205.5
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
++|.+|..||+|..++|.+++... .+.++.|.+|-. ||.... .. +|
T Consensus 132 ~~~d~vwvhDYhl~l~p~~lr~~~------~~~~igfFlH~p-----fP~~~~f~~--lp-------------------- 178 (726)
T PRK14501 132 RPGDVVWVHDYQLMLLPAMLRERL------PDARIGFFLHIP-----FPSFEVFRL--LP-------------------- 178 (726)
T ss_pred CCCCEEEEeCchhhhHHHHHHhhC------CCCcEEEEeeCC-----CCChHHHhh--CC--------------------
Confidence 354499999999999999998764 688999999943 332211 11 11
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccchh--h-h--hccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN--I-I--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~--~-~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
....+-.++..+|.|-+-+..+.+.+.+... .+.+... + + +..++.++|||+|++.|.+....
T Consensus 179 ~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~~~~~~gr~~~v~v~p~GID~~~f~~~~~~---------- 248 (726)
T PRK14501 179 WREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELGEIRLGGRIVRVDAFPMGIDYDKFHNSAQD---------- 248 (726)
T ss_pred ChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCCeEEECCEEEEEEEEECeEcHHHHHHHhcC----------
Confidence 1234456778899999999888776554211 1211000 0 0 12368999999999998764210
Q ss_pred hhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCC-----c--hhHH
Q 007224 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTG-----K--KPME 446 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~~~lvivG~g-----~--~~~~ 446 (612)
.......+.+++.. +++++|+++||+++.||++.+++|++++.+ + +++|+++|.+ + ..++
T Consensus 249 --~~~~~~~~~lr~~~-----~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~ 321 (726)
T PRK14501 249 --PEVQEEIRRLRQDL-----RGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMK 321 (726)
T ss_pred --chHHHHHHHHHHHc-----CCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHH
Confidence 00011122344443 255799999999999999999999999865 4 3789888743 1 2345
Q ss_pred HHHHHHHHHCC----C----ceEEE-eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHc-----CCceEEcCCCCc
Q 007224 447 KQLEQLEILYP----E----KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRY-----GTVPIVASTGGL 512 (612)
Q Consensus 447 ~~l~~l~~~~~----~----~i~~~-~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~-----G~PvI~s~~gg~ 512 (612)
++++++..+.+ . .+..+ ..++.+++..+|+.||++++||..||||++++|||+| |+||++...|+.
T Consensus 322 ~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~ 401 (726)
T PRK14501 322 REIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAA 401 (726)
T ss_pred HHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchh
Confidence 55555543322 1 12222 3457788889999999999999999999999999999 557777778888
Q ss_pred ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHH--HHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 513 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM--MKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 513 ~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~--~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
.+++ +|+++ +|.|+++++++|.+++.++..+....+ .++ ....|||+..++++++.|+++..
T Consensus 402 ~~l~----~~llv----------~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~-~v~~~~~~~w~~~~l~~l~~~~~ 465 (726)
T PRK14501 402 AELA----EALLV----------NPNDIEGIAAAIKRALEMPEEEQRERMQAMQE-RLRRYDVHKWASDFLDELREAAE 465 (726)
T ss_pred HHhC----cCeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH-HHHhCCHHHHHHHHHHHHHHHHh
Confidence 8875 37876 999999999999999986433322222 222 24689999999999999998854
No 79
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.89 E-value=1.1e-20 Score=201.93 Aligned_cols=222 Identities=16% Similarity=0.159 Sum_probs=162.4
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+++..++.+|.|+++|+...+.+.. ++ + ++.+|+||+|.+.|.+.....
T Consensus 145 ~~e~~~~~~ad~vi~~S~~l~~~~~~---~~-~--------~i~~i~ngvd~~~f~~~~~~~------------------ 194 (373)
T cd04950 145 EAERRLLKRADLVFTTSPSLYEAKRR---LN-P--------NVVLVPNGVDYEHFAAARDPP------------------ 194 (373)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHhh---CC-C--------CEEEcccccCHHHhhcccccC------------------
Confidence 56788899999999999999988875 33 2 799999999999887653210
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccCh
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~ 468 (612)
...+... ..+.++|+|+|++.+.++++.+.+++... ++++|+|+|.++... ....+. ...++.+.+..+.
T Consensus 195 ~~~~~~~----~~~~~~i~y~G~l~~~~d~~ll~~la~~~--p~~~~vliG~~~~~~--~~~~~~--~~~nV~~~G~~~~ 264 (373)
T cd04950 195 PPPADLA----ALPRPVIGYYGAIAEWLDLELLEALAKAR--PDWSFVLIGPVDVSI--DPSALL--RLPNVHYLGPKPY 264 (373)
T ss_pred CChhHHh----cCCCCEEEEEeccccccCHHHHHHHHHHC--CCCEEEEECCCcCcc--ChhHhc--cCCCEEEeCCCCH
Confidence 0000111 12458999999999988888777666543 789999999983111 112221 1245888888888
Q ss_pred HHHHHHHHhcCEEEeCCCC-----CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHH
Q 007224 469 PLAHMIIAGADFILIPSRF-----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS~~-----E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~l 543 (612)
+++..+++.+|++++|+.. +++|++++|||+||+|||+|+.+.+.+ .+..+++ .+.|++++
T Consensus 265 ~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~~-----------~~~d~~~~ 330 (373)
T cd04950 265 KELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVVL-----------IADDPEEF 330 (373)
T ss_pred HHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcEEE-----------eCCCHHHH
Confidence 8899999999999999864 368999999999999999998655443 3333443 45699999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 007224 544 STTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 544 a~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~ 586 (612)
+++|.+++.+...+...+ ..+ +.+.+||+..++++++.+++
T Consensus 331 ~~ai~~~l~~~~~~~~~~-~~~-~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 331 VAAIEKALLEDGPARERR-RLR-LAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHHHHHHHhcCCchHHHH-HHH-HHHHCCHHHHHHHHHHHHHh
Confidence 999999876643333322 222 67889999999999976654
No 80
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.88 E-value=5.5e-21 Score=207.97 Aligned_cols=233 Identities=16% Similarity=0.125 Sum_probs=164.0
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+++..+..+|.|+++|+..++.+.+ .|++ .. +.+++|. +.+.+.+.. .....
T Consensus 170 ~~~r~~~~~~d~ii~~S~~~~~~l~~---~g~~------~~-i~vi~n~-~~d~~~~~~----------------~~~~~ 222 (425)
T PRK05749 170 RFYRLLFKNIDLVLAQSEEDAERFLA---LGAK------NE-VTVTGNL-KFDIEVPPE----------------LAARA 222 (425)
T ss_pred HHHHHHHHhCCEEEECCHHHHHHHHH---cCCC------CC-cEecccc-cccCCCChh----------------hHHHH
Confidence 45566788899999999999999986 5654 12 6778884 332222110 01123
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCce------
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA------ 460 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i------ 460 (612)
..++++++ + +.++++++|+. .|+.+.+++|+.++.+ ++++|+|+|.|+.. .+.++++.++.+...
T Consensus 223 ~~~r~~~~-~---~~~vil~~~~~--~~~~~~ll~A~~~l~~~~~~~~liivG~g~~r-~~~l~~~~~~~gl~~~~~~~~ 295 (425)
T PRK05749 223 ATLRRQLA-P---NRPVWIAASTH--EGEEELVLDAHRALLKQFPNLLLILVPRHPER-FKEVEELLKKAGLSYVRRSQG 295 (425)
T ss_pred HHHHHHhc-C---CCcEEEEeCCC--chHHHHHHHHHHHHHHhCCCcEEEEcCCChhh-HHHHHHHHHhCCCcEEEccCC
Confidence 45677766 3 44788888874 6789999999999865 79999999998732 245666666554211
Q ss_pred --------EEEeccChHHHHHHHHhcCEEEe-CCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecC-ceEEEecccc
Q 007224 461 --------RGVAKFNIPLAHMIIAGADFILI-PSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEG-FTGFQMGSFS 529 (612)
Q Consensus 461 --------~~~~~~~~~~~~~~l~~adi~l~-pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g-~~G~l~~~~~ 529 (612)
...+. ...++..+|+.||++++ +|..|++|.+++|||+||+|||+++. ++..|+++.. .+|+++
T Consensus 296 ~~~~~~~~v~l~~-~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~~g~~~---- 370 (425)
T PRK05749 296 EPPSADTDVLLGD-TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQAGAAI---- 370 (425)
T ss_pred CCCCCCCcEEEEe-cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHHCCCeE----
Confidence 11111 23456789999999665 67779999999999999999999864 6666665542 457766
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 530 VDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 530 ~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
.+.|+++++++|.+++++ ++.+.+|++++.+.--+.....+++.+++++.+
T Consensus 371 ------~~~d~~~La~~l~~ll~~--~~~~~~m~~~a~~~~~~~~~~~~~~~~~l~~~l 421 (425)
T PRK05749 371 ------QVEDAEDLAKAVTYLLTD--PDARQAYGEAGVAFLKQNQGALQRTLQLLEPYL 421 (425)
T ss_pred ------EECCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhCccHHHHHHHHHHHhc
Confidence 789999999999999997 677777877764211122477788888887655
No 81
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.88 E-value=2.2e-20 Score=200.39 Aligned_cols=216 Identities=16% Similarity=0.131 Sum_probs=157.1
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
...+|.++++|+..++.+.+ +|++.+ ++.++++++|.+.+.+... +..++++
T Consensus 148 ~~~~d~~~~~s~~~~~~l~~---~g~~~~------ki~v~g~~v~~~f~~~~~~-------------------~~~~r~~ 199 (382)
T PLN02605 148 HKGVTRCFCPSEEVAKRALK---RGLEPS------QIRVYGLPIRPSFARAVRP-------------------KDELRRE 199 (382)
T ss_pred cCCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECcccCHhhccCCCC-------------------HHHHHHH
Confidence 45799999999999999886 677765 8889999988765443211 5668899
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc------cCCcE-EEEEeCCchhHHHHHHHHHHHCCCceEEEeccC
Q 007224 395 VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI------KENVQ-IIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~------~~~~~-lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~ 467 (612)
+|++. +.++|+++|+....|++..+++++.++. .++++ ++++|.+. ...+.++++.. ..++...+..
T Consensus 200 ~gl~~--~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~-~~~~~L~~~~~--~~~v~~~G~~- 273 (382)
T PLN02605 200 LGMDE--DLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK-KLQSKLESRDW--KIPVKVRGFV- 273 (382)
T ss_pred cCCCC--CCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH-HHHHHHHhhcc--cCCeEEEecc-
Confidence 99974 4589999999999999999999998753 35676 56777664 34555555422 2335544433
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC------CCcccceecCceEEEecccccccCCCCCCCHH
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST------GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~------gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 541 (612)
+.++++|+.||++|.++ .|++++|||+||+|+|+++. |+. +.+.+++.|+. ..|++
T Consensus 274 -~~~~~l~~aaDv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~-~~i~~~g~g~~------------~~~~~ 335 (382)
T PLN02605 274 -TNMEEWMGACDCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNV-PYVVDNGFGAF------------SESPK 335 (382)
T ss_pred -ccHHHHHHhCCEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhH-HHHHhCCceee------------cCCHH
Confidence 34678999999999855 58899999999999999984 444 34445556764 37999
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHH
Q 007224 542 AVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEET 583 (612)
Q Consensus 542 ~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~ 583 (612)
+++++|.+++.+ +++.+++|++++. ....+.+.+++.+.++
T Consensus 336 ~la~~i~~ll~~-~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 336 EIARIVAEWFGD-KSDELEAMSENALKLARPEAVFDIVHDLHEL 378 (382)
T ss_pred HHHHHHHHHHcC-CHHHHHHHHHHHHHhcCCchHHHHHHHHHHH
Confidence 999999999986 2456777777763 3455666666655544
No 82
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.87 E-value=4.2e-21 Score=181.87 Aligned_cols=164 Identities=27% Similarity=0.444 Sum_probs=139.4
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc---cCCcEEEEEeCCchhHHHHHHHHHHHCC--CceEE
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI---KENVQIIVLGTGKKPMEKQLEQLEILYP--EKARG 462 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~---~~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~ 462 (612)
++.++...+.+ ++.++|+|+||+.+.||++.+++++..+. .++++++|+|.+. +...++.+...++ .++.+
T Consensus 2 ~~~~~~~~~~~--~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~--~~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 2 KDKLREKLKIP--DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGE--YKKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp HHHHHHHTTT---TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCC--HHHHHHHHHHHTTCGTTEEE
T ss_pred hHHHHHHcCCC--CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEcccc--cccccccccccccccccccc
Confidence 45666776665 35689999999999999999999999996 4799999999766 5556666666544 46888
Q ss_pred EeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHH
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 542 (612)
.+..+.+.+..+|+.||++++||..|+||++++|||+||+|||+++.|+..|++.++.+|+++ ++.|+++
T Consensus 78 ~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~----------~~~~~~~ 147 (172)
T PF00534_consen 78 LGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLF----------DPNDIEE 147 (172)
T ss_dssp EESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEE----------STTSHHH
T ss_pred cccccccccccccccceeccccccccccccccccccccccceeeccccCCceeeccccceEEe----------CCCCHHH
Confidence 877777788899999999999999999999999999999999999999999999999999998 8999999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHHH
Q 007224 543 VSTTVRRALATYGTQALAEMMKNGM 567 (612)
Q Consensus 543 la~~l~~ll~~~~~~~~~~~~~~~~ 567 (612)
++++|.+++++ ++.+..|++++.
T Consensus 148 l~~~i~~~l~~--~~~~~~l~~~~~ 170 (172)
T PF00534_consen 148 LADAIEKLLND--PELRQKLGKNAR 170 (172)
T ss_dssp HHHHHHHHHHH--HHHHHHHHHHHH
T ss_pred HHHHHHHHHCC--HHHHHHHHHHhc
Confidence 99999999999 677788887764
No 83
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.87 E-value=1.8e-20 Score=198.90 Aligned_cols=242 Identities=18% Similarity=0.177 Sum_probs=178.2
Q ss_pred HHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHH
Q 007224 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 393 (612)
....+|++++.|...+..+.. .... + ....+.+.+.++|.+.+.+.- | +.+...+...+.
T Consensus 206 ~~~~~~~~~~ns~~~~~~f~~-~~~~--L----~~~d~~~~y~ei~~s~~~~~~-------~------~~~~~~~~~~r~ 265 (495)
T KOG0853|consen 206 TTGLAWKILVNSYFTKRQFKA-TFVS--L----SNSDITSTYPEIDGSWFTYGQ-------Y------ESHLELRLPVRL 265 (495)
T ss_pred hhhccceEecchhhhhhhhhh-hhhh--c----CCCCcceeeccccchhccccc-------c------ccchhcccccce
Confidence 355789999999888887775 1111 1 122588888899988776521 0 011111222233
Q ss_pred HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-------CCcEEEEEeCC--------chhHHHHHHHHHHHCCC
Q 007224 394 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTG--------KKPMEKQLEQLEILYPE 458 (612)
Q Consensus 394 ~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~-------~~~~lvivG~g--------~~~~~~~l~~l~~~~~~ 458 (612)
+.+.. .....+.-+.|+++.|+++++++++.++.. .+.+++++|+. +..+.+.+.++.++++.
T Consensus 266 ~~~v~--~~d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~l 343 (495)
T KOG0853|consen 266 YRGVS--GIDRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYDL 343 (495)
T ss_pred eeeec--ccceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhCc
Confidence 33332 234678889999999999999999998865 36788999842 13567788888888852
Q ss_pred --ceEEE-eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCC
Q 007224 459 --KARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 459 --~i~~~-~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v 535 (612)
+...+ ...+......+++.+.+.+.....|+||++.+|||+||+|||+++.||..|+|.++.|||++
T Consensus 344 ~g~~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~---------- 413 (495)
T KOG0853|consen 344 LGQFVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHGVTGLLI---------- 413 (495)
T ss_pred cCceEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcCCcceee----------
Confidence 34433 34455555567788888877777799999999999999999999999999999999999987
Q ss_pred CCCCHH---HHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 536 DPVDVA---AVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 536 ~~~d~~---~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
+| +.+ .+++++.++..+ ++.+.+|++++ +.+.|||+.+.+++.++..+....
T Consensus 414 dp-~~e~~~~~a~~~~kl~~~--p~l~~~~~~~G~~rV~e~fs~~~~~~ri~~~~~~~~~~ 471 (495)
T KOG0853|consen 414 DP-GQEAVAELADALLKLRRD--PELWARMGKNGLKRVKEMFSWQHYSERIASVLGKYLQW 471 (495)
T ss_pred CC-chHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhHhcCCc
Confidence 88 666 699999999998 66677777666 578899999999999988866543
No 84
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.87 E-value=5.8e-20 Score=197.60 Aligned_cols=222 Identities=14% Similarity=0.108 Sum_probs=157.9
Q ss_pred HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHh
Q 007224 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 395 (612)
..+|.+++.|+..++.+.+ .|++.+ ++.++.|+++.....+. + +..++.++
T Consensus 146 ~~~d~~~v~s~~~~~~l~~---~gi~~~------ki~v~GiPv~~~f~~~~-~-------------------~~~~~~~~ 196 (391)
T PRK13608 146 PYSTRYYVATKETKQDFID---VGIDPS------TVKVTGIPIDNKFETPI-D-------------------QKQWLIDN 196 (391)
T ss_pred CCCCEEEECCHHHHHHHHH---cCCCHH------HEEEECeecChHhcccc-c-------------------HHHHHHHc
Confidence 4789999999999999986 677655 78887777764332211 1 44567788
Q ss_pred CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007224 396 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 396 gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l 475 (612)
|++.+ ...++++.|++...||++.+++++.+. .+++++++++.+++...+.+++.... ..++...+ +. +.++++|
T Consensus 197 ~l~~~-~~~ilv~~G~lg~~k~~~~li~~~~~~-~~~~~~vvv~G~~~~l~~~l~~~~~~-~~~v~~~G-~~-~~~~~~~ 271 (391)
T PRK13608 197 NLDPD-KQTILMSAGAFGVSKGFDTMITDILAK-SANAQVVMICGKSKELKRSLTAKFKS-NENVLILG-YT-KHMNEWM 271 (391)
T ss_pred CCCCC-CCEEEEECCCcccchhHHHHHHHHHhc-CCCceEEEEcCCCHHHHHHHHHHhcc-CCCeEEEe-cc-chHHHHH
Confidence 88743 224566789999899999999986432 26789876654343333444433222 23454443 43 3467899
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
+.||++|. ++.|++++|||++|+|+|+++. +| ..+.+.+.+.|+. ..|.++++++|.++
T Consensus 272 ~~aDl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~------------~~~~~~l~~~i~~l 335 (391)
T PRK13608 272 ASSQLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKI------------ADTPEEAIKIVASL 335 (391)
T ss_pred HhhhEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEE------------eCCHHHHHHHHHHH
Confidence 99999996 4579999999999999999974 33 1123334555654 46999999999999
Q ss_pred HHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHH
Q 007224 551 LATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+++ ++.+.+|++++. .+.++++.+++++++++..+..
T Consensus 336 l~~--~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~ 374 (391)
T PRK13608 336 TNG--NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQ 374 (391)
T ss_pred hcC--HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhh
Confidence 987 677888888874 5679999999999999876654
No 85
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.85 E-value=1.5e-19 Score=177.21 Aligned_cols=118 Identities=28% Similarity=0.443 Sum_probs=95.6
Q ss_pred EEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHHHHHHhcCEEEeC
Q 007224 408 FIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIAGADFILIP 484 (612)
Q Consensus 408 ~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~~~l~~adi~l~p 484 (612)
|+|++.++||++.+++++..+.+ ++++++++|.+.+...............++.....+ ..+....+++.||++++|
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~~~i~G~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~di~l~~ 188 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYLEELLAALLLLDRVIFLGGLDPEELLALLLAAADVFVLP 188 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeEEEEEeCCCChHHHHHHHHhcCCcccEEEeCCCCcHHHHHHHhhcCCEEEec
Confidence 99999999999999999999976 599999999987432221111122233457766665 455666677779999999
Q ss_pred CCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEe
Q 007224 485 SRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQM 525 (612)
Q Consensus 485 S~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~ 525 (612)
|..|++|++++|||+||+|+|+|+.++..|++.++.+|+++
T Consensus 189 ~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 189 SLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred ccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 99999999999999999999999999999999999999863
No 86
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=99.84 E-value=7e-19 Score=190.48 Aligned_cols=292 Identities=16% Similarity=0.153 Sum_probs=205.9
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
++|.+|-.||+|..++|.+|+... .+.++-|.+|. .||..++ ..+ .
T Consensus 131 ~~~d~vWVhDYhL~llp~~LR~~~------~~~~IgfFlHi-----PFPs~eifr~L----------------------P 177 (487)
T TIGR02398 131 AEGATVWVHDYNLWLVPGYIRQLR------PDLKIAFFHHT-----PFPSADVFNIL----------------------P 177 (487)
T ss_pred CCCCEEEEecchhhHHHHHHHHhC------CCCeEEEEeeC-----CCCChHHHhhC----------------------C
Confidence 355599999999999999999864 68899999993 3432211 111 1
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccchh-----------------------h---hhccCeEEeeCCC
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVELDN-----------------------I---IRKTGIKGIVNGM 358 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~~~-----------------------~---~~~~~i~vI~Ngv 358 (612)
....+-.++..+|.|-+.+..+++.+.+... .|.+... + =+...+.++|.||
T Consensus 178 ~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v~v~~~PiGI 257 (487)
T TIGR02398 178 WREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVVKLGAHPVGT 257 (487)
T ss_pred chHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccccccccceeECCEEEEEEEEECEe
Confidence 2234556788999999999998877654211 1211100 0 0223589999999
Q ss_pred ccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----C
Q 007224 359 DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----N 432 (612)
Q Consensus 359 d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~ 432 (612)
|++.|.+.... .......+.++++++ ++++|++++|+++.||++..++|++++.+ | +
T Consensus 258 D~~~f~~~~~~------------~~~~~~~~~lr~~~~-----~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gk 320 (487)
T TIGR02398 258 DPERIRSALAA------------ASIREMMERIRSELA-----GVKLILSAERVDYTKGILEKLNAYERLLERRPELLGK 320 (487)
T ss_pred cHHHHHHHhcC------------chHHHHHHHHHHHcC-----CceEEEEecccccccCHHHHHHHHHHHHHhCccccCc
Confidence 99988654210 011122455787776 45799999999999999999999999865 4 5
Q ss_pred cEEEEEeCCc-------hhHHHHHHHHHHHCCC---------ceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHH
Q 007224 433 VQIIVLGTGK-------KPMEKQLEQLEILYPE---------KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLH 496 (612)
Q Consensus 433 ~~lvivG~g~-------~~~~~~l~~l~~~~~~---------~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lE 496 (612)
+.|+++|.+. ..+++++++++.+.+. .+.....++.+++..+|+.||++++||..||++++..|
T Consensus 321 v~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~E 400 (487)
T TIGR02398 321 VTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKE 400 (487)
T ss_pred eEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhh
Confidence 7899998864 2356667776655321 12233344778888899999999999999999999999
Q ss_pred HHHcCC----ceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhcC
Q 007224 497 AMRYGT----VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDL 571 (612)
Q Consensus 497 Ama~G~----PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~-~~~~~ 571 (612)
+++|+. |+|.|..+|..+.+. .++++ .|.|++++|++|.++++++..++..++.+.. ....+
T Consensus 401 yva~~~~~~GvLILSefaGaa~~l~---~AllV----------NP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~ 467 (487)
T TIGR02398 401 YVAAQGLLDGVLVLSEFAGAAVELK---GALLT----------NPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYY 467 (487)
T ss_pred HHhhhcCCCCCEEEeccccchhhcC---CCEEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhC
Confidence 999988 999999999887764 36766 9999999999999999986444434333222 23455
Q ss_pred CcHHHHHHHHH
Q 007224 572 SWKGPAKKWEE 582 (612)
Q Consensus 572 sw~~~a~~~~~ 582 (612)
+-..-++.+++
T Consensus 468 d~~~W~~~fl~ 478 (487)
T TIGR02398 468 DVQRWADEFLA 478 (487)
T ss_pred CHHHHHHHHHH
Confidence 55544555443
No 87
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.79 E-value=2.6e-17 Score=176.31 Aligned_cols=218 Identities=17% Similarity=0.118 Sum_probs=144.7
Q ss_pred HHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHH
Q 007224 314 GILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 314 ~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 393 (612)
..+.+|.++++|+..++.+.+ +|. ++.++.|.+..... +.. .+..+++
T Consensus 131 ~~~~~d~i~~~~~~~~~~~~~---~g~---------~~~~~G~p~~~~~~-~~~-------------------~~~~~~~ 178 (380)
T PRK00025 131 IAKATDHVLALFPFEAAFYDK---LGV---------PVTFVGHPLADAIP-LLP-------------------DRAAARA 178 (380)
T ss_pred HHHHHhhheeCCccCHHHHHh---cCC---------CeEEECcCHHHhcc-ccc-------------------ChHHHHH
Confidence 466889999999988888764 332 24444444432211 100 1456778
Q ss_pred HhCCCCCCCCcEE-EEEc-Ccccc-cCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHC-CCceEEEeccC
Q 007224 394 EVGLPVDRNIPVI-GFIG-RLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFN 467 (612)
Q Consensus 394 ~~gl~~~~~~~~i-l~iG-rl~~~-Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~-~~~i~~~~~~~ 467 (612)
++|++.+ .+++ ++.| |..+. +..+.++++++.+.+ ++++++++|.+. ...+.++++..+. +..+.. +.
T Consensus 179 ~l~~~~~--~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~-~~~~~~~~~~~~~~~~~v~~---~~ 252 (380)
T PRK00025 179 RLGLDPD--ARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNP-KRREQIEEALAEYAGLEVTL---LD 252 (380)
T ss_pred HcCCCCC--CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCh-hhHHHHHHHHhhcCCCCeEE---Ec
Confidence 8888643 3554 4445 44444 457899999998854 589999987633 2455566665555 322322 22
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc-----------------CCCCcccceecCc--eEEEeccc
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-----------------STGGLVDTVEEGF--TGFQMGSF 528 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s-----------------~~gg~~e~v~~g~--~G~l~~~~ 528 (612)
+.+..+|+.||++|.+| |.+.+|||++|+|+|++ +.+++++++.++. .+++
T Consensus 253 -~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---- 322 (380)
T PRK00025 253 -GQKREAMAAADAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELL---- 322 (380)
T ss_pred -ccHHHHHHhCCEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhc----
Confidence 34667999999999987 88999999999999987 4566777777654 3454
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHH
Q 007224 529 SVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 529 ~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
++..|++++++.+.++++| ++.+++|++++ ..+.. -...+++..+.+.++.
T Consensus 323 ------~~~~~~~~l~~~i~~ll~~--~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 323 ------QEEATPEKLARALLPLLAD--GARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred ------CCCCCHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 3778999999999999998 77777777765 22333 3335566666555544
No 88
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.78 E-value=8.2e-17 Score=171.15 Aligned_cols=215 Identities=17% Similarity=0.160 Sum_probs=144.6
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 393 (612)
.+.+|.++++|+..++.+.+ .|++.+ ++.+++|++ |...+.+... .....++
T Consensus 139 ~~~ad~~~~~s~~~~~~l~~---~G~~~~------kI~vign~v~d~~~~~~~~~------------------~~~~~~~ 191 (363)
T cd03786 139 DKLSDLHFAPTEEARRNLLQ---EGEPPE------RIFVVGNTMIDALLRLLELA------------------KKELILE 191 (363)
T ss_pred HHHhhhccCCCHHHHHHHHH---cCCCcc------cEEEECchHHHHHHHHHHhh------------------ccchhhh
Confidence 45789999999999999886 677755 899999985 5433221110 0112245
Q ss_pred HhCCCCCCCCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC---CceEEEeccC
Q 007224 394 EVGLPVDRNIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKFN 467 (612)
Q Consensus 394 ~~gl~~~~~~~~il~iGrl~~---~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~---~~i~~~~~~~ 467 (612)
+++++ ++..++++.||... .|+++.+++++.++.+.++.+++.|.+. ..+.+++...++. .++.+.....
T Consensus 192 ~~~~~--~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~--~~~~l~~~~~~~~~~~~~v~~~~~~~ 267 (363)
T cd03786 192 LLGLL--PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPR--TRPRIREAGLEFLGHHPNVLLISPLG 267 (363)
T ss_pred hcccC--CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCC--hHHHHHHHHHhhccCCCCEEEECCcC
Confidence 66765 23357778999875 7999999999999855456666666554 4455665555442 3455554344
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCCCCCHHHHHHH
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~ 546 (612)
.+.+..+++.||++|.+|- | ++.|||++|+|+|+++. +..++.+++|. ++. ...|+++++++
T Consensus 268 ~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~g~-~~~-----------~~~~~~~i~~~ 330 (363)
T cd03786 268 YLYFLLLLKNADLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVESGT-NVL-----------VGTDPEAILAA 330 (363)
T ss_pred HHHHHHHHHcCcEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhheee-EEe-----------cCCCHHHHHHH
Confidence 5667789999999999984 4 57999999999999975 44666666543 332 22379999999
Q ss_pred HHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q 007224 547 VRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 547 l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~ 583 (612)
|.+++++ +.....|. ...|.-...+++..++
T Consensus 331 i~~ll~~--~~~~~~~~----~~~~~~~~a~~~I~~~ 361 (363)
T cd03786 331 IEKLLSD--EFAYSLMS----INPYGDGNASERIVEI 361 (363)
T ss_pred HHHHhcC--chhhhcCC----CCCCCCCHHHHHHHHH
Confidence 9999987 44444443 2344444445555444
No 89
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=99.78 E-value=2.1e-16 Score=166.34 Aligned_cols=185 Identities=16% Similarity=0.099 Sum_probs=134.5
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..+++..++.+|.++++|+.+++.+.+ .|++.+ ++.+++|..+.....+.
T Consensus 114 ~~~~~~~~~~aD~iI~~S~~~~~~l~~---~g~~~~------~i~~~~~~~~~~~~~~~--------------------- 163 (333)
T PRK09814 114 MKEEIDMLNLADVLIVHSKKMKDRLVE---EGLTTD------KIIVQGIFDYLNDIELV--------------------- 163 (333)
T ss_pred hHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcC------ceEeccccccccccccc---------------------
Confidence 466788899999999999999999986 566433 56666554433111100
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccC
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~ 467 (612)
. ..+..+.|+|+|++....+ +. . ..++++|+|+|+|+... ....++.+.+.++
T Consensus 164 -----~-----~~~~~~~i~yaG~l~k~~~----l~---~-~~~~~~l~i~G~g~~~~---------~~~~~V~f~G~~~ 216 (333)
T PRK09814 164 -----K-----TPSFQKKINFAGNLEKSPF----LK---N-WSQGIKLTVFGPNPEDL---------ENSANISYKGWFD 216 (333)
T ss_pred -----c-----cccCCceEEEecChhhchH----HH---h-cCCCCeEEEECCCcccc---------ccCCCeEEecCCC
Confidence 0 0123468999999994332 11 1 23679999999997321 2335688888889
Q ss_pred hHHHHHHHHhcCEEEeCCCC-----------CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCC
Q 007224 468 IPLAHMIIAGADFILIPSRF-----------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~-----------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~ 536 (612)
.+++..+|+. |+.+++... -++|.++.|+|+||+|||+++.+++.|+|+++.+|+++ +
T Consensus 217 ~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V~~~~~G~~v----------~ 285 (333)
T PRK09814 217 PEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFIVENGLGFVV----------D 285 (333)
T ss_pred HHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHHHhCCceEEe----------C
Confidence 9999888888 766664321 25789999999999999999999999999999999987 4
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 007224 537 PVDVAAVSTTVRRALATYGTQALAEMMKNG 566 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~~~~~~~~~~~~~~~ 566 (612)
+.+++++.+..+. .+.+.+|++++
T Consensus 286 --~~~el~~~l~~~~----~~~~~~m~~n~ 309 (333)
T PRK09814 286 --SLEELPEIIDNIT----EEEYQEMVENV 309 (333)
T ss_pred --CHHHHHHHHHhcC----HHHHHHHHHHH
Confidence 7889999998853 34566777766
No 90
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=99.78 E-value=8.7e-17 Score=172.96 Aligned_cols=442 Identities=19% Similarity=0.245 Sum_probs=227.3
Q ss_pred EeccccCccccccHHHHhhhhHHHHHh-CCCeEEEEeecCCcccccCCccEEE-EE----------EeCCeeeEEEEEEe
Q 007224 90 VGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPRYDQYKDAWDTDVVI-EL----------KVGDKIEKVRFFHC 157 (612)
Q Consensus 90 v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~ 157 (612)
+++|+.- |.||+=+++..-|+.+++ .|.+..+|-|...+.. .+.... +. .....--.+++.+.
T Consensus 2 ~sWEVcN--KVGGIYTVi~tKA~~~~~e~gd~y~lIGP~~~~~~---~~e~e~~e~~~~~l~~~~~~~~~~Gl~v~~GRW 76 (633)
T PF05693_consen 2 VSWEVCN--KVGGIYTVISTKAPTMVEEFGDNYILIGPYNEQNA---RTEVEEIEPDNPLLKDALESMREEGLKVRYGRW 76 (633)
T ss_dssp EETTTTS---SSSHHHHHHHHHHHHHHHHGGGEEEEEE--TTTH---HHHEEE--SSSGGHHHHHHHHHHTT-EEEEEEE
T ss_pred chhhhcc--ccCCeehhhhccHHHHHHHHCCeEEEECCCCCccc---CCCCCcCCCCCHHHHHHHHHHHhCCCeEEEece
Confidence 3444433 689999999998888774 4889999988643211 000000 00 00000123566677
Q ss_pred eecCceEEEE-eChhhhhh------hhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCc
Q 007224 158 HKRGVDRVFV-DHPWFLAK------VVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGED 230 (612)
Q Consensus 158 ~~~gv~~~~l-~~~~~~~~------~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pD 230 (612)
.++|.+++.+ |...++.+ -.|...+ +-.+..+.+|. ....|...+..+++.+...... ++.
T Consensus 77 lI~G~P~vIL~D~~s~~~~ldeik~~lW~~~g--IdS~~~~~dyn-ea~~Fgyava~fi~~f~~~~~~---------~~~ 144 (633)
T PF05693_consen 77 LIPGRPIVILFDFGSFFWKLDEIKGELWELFG--IDSPHGDGDYN-EAVMFGYAVAWFIEEFYKFYEE---------KPK 144 (633)
T ss_dssp SSTT--EEEEEEGGGGGGGHHHHHHHHHHHH-------TT-HHHH-HHHHHHHHHHHHHHHHHHH-S----------SEE
T ss_pred eECCcCeEEEEeCchHHHHHHHHHHHHHHHcC--CCCCCCCcchh-HHHHHHHHHHHHHHHHHHhhcC---------CCc
Confidence 7888877765 43322211 1454332 11111111222 2233444444455444433211 478
Q ss_pred EEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCC---CcCCcc
Q 007224 231 VVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK---PVRGRK 307 (612)
Q Consensus 231 vvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~ 307 (612)
||.|+|+|+++....+++... ..+..|||.|.+.. ||+- .+-...+...+...++-.. +-..-+
T Consensus 145 ViaHfHEWmaG~gll~lr~~~------~~VaTvFTTHAT~l-GR~l------~~~~~~~Y~~L~~~~~d~eA~~~~i~~k 211 (633)
T PF05693_consen 145 VIAHFHEWMAGVGLLYLRKRK------PDVATVFTTHATLL-GRYL------AANNKDFYNNLDKFNGDQEAGERNIYHK 211 (633)
T ss_dssp EEEEEESGGGTTHHHHHHHTT-------SCEEEEEESS-HH-HHHH------TTTSS-TTTSGTTS-HHHHHHHTT-HHH
T ss_pred EEEEechHhHhHHHHHHhccC------CCeeEEEEecccch-hhHh------hcCCCcHHHHhhccCccccccCccchHH
Confidence 899999999999888888764 68999999997654 4430 0001111111111010000 000123
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
...++.+...||.+.|||+-.+.+-.. ++.+..=.|+|||++++.|..... + ..-+...
T Consensus 212 ~~iEraaA~~AdvFTTVSeITa~Ea~~----------LL~r~pDvV~pNGl~v~~~~~~~e-f----------qnl~~~~ 270 (633)
T PF05693_consen 212 HSIERAAAHYADVFTTVSEITAKEAEH----------LLKRKPDVVTPNGLNVDKFPALHE-F----------QNLHAKA 270 (633)
T ss_dssp HHHHHHHHHHSSEEEESSHHHHHHHHH----------HHSS--SEE----B-GGGTSSTTH-H----------HHHHHHH
T ss_pred HHHHHHHHHhcCeeeehhhhHHHHHHH----------HhCCCCCEEcCCCccccccccchH-H----------HHHHHHH
Confidence 567788899999999999998887652 222224477899999987754321 0 0112233
Q ss_pred HHHHH----HHh-C-CCCCC-CCcEEEEEcCcc-cccCHHHHHHHHHhccc------CCcE---EEEEeCCc-----h--
Q 007224 388 KEALQ----AEV-G-LPVDR-NIPVIGFIGRLE-EQKGSDILAAAIPHFIK------ENVQ---IIVLGTGK-----K-- 443 (612)
Q Consensus 388 k~~l~----~~~-g-l~~~~-~~~~il~iGrl~-~~Kg~d~ll~a~~~l~~------~~~~---lvivG~g~-----~-- 443 (612)
|+.++ ..+ | +.-+. +..+|...||++ .+||+|.+|+|+.+|.. .+.. |+|+=... +
T Consensus 271 k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~ve~l 350 (633)
T PF05693_consen 271 KEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNVESL 350 (633)
T ss_dssp HHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-HHHH
T ss_pred HHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCHHHH
Confidence 43333 222 2 12222 344566689999 69999999999999843 1322 33433210 0
Q ss_pred -------hHH-------H------------------------------------------------------------HH
Q 007224 444 -------PME-------K------------------------------------------------------------QL 449 (612)
Q Consensus 444 -------~~~-------~------------------------------------------------------------~l 449 (612)
..+ + .+
T Consensus 351 ~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpILn~i 430 (633)
T PF05693_consen 351 KGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPILNMI 430 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHHHHH
Confidence 000 0 00
Q ss_pred HHHHHHC----CCceEEEeccC-h------HHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec
Q 007224 450 EQLEILY----PEKARGVAKFN-I------PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518 (612)
Q Consensus 450 ~~l~~~~----~~~i~~~~~~~-~------~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 518 (612)
+++...+ ..+++++..|. + -...+++.+||+.|+||.+||+|.+.+|+.++|+|.|+|+..|+...+.+
T Consensus 431 rr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~ 510 (633)
T PF05693_consen 431 RRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQE 510 (633)
T ss_dssp HHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHT
T ss_pred HhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHH
Confidence 0000000 11333333331 0 11236899999999999999999999999999999999999887655543
Q ss_pred -----CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh---CHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHH
Q 007224 519 -----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY---GTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 519 -----g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~---~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
...|+.+=.. ...+.++.++.|.+.+.+. .+..+..+..++ +++..+|+....-|.+.|+.++
T Consensus 511 ~~~~~~~~GV~VvdR-------~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL 583 (633)
T PF05693_consen 511 HIEDPEEYGVYVVDR-------RDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLAL 583 (633)
T ss_dssp TS-HHGGGTEEEE-S-------SSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHH
T ss_pred hhccCcCCcEEEEeC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 3456655111 2345666666665555432 123333333333 5799999999999999998776
Q ss_pred H
Q 007224 589 V 589 (612)
Q Consensus 589 ~ 589 (612)
.
T Consensus 584 ~ 584 (633)
T PF05693_consen 584 R 584 (633)
T ss_dssp H
T ss_pred H
Confidence 4
No 91
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.76 E-value=8.5e-17 Score=171.52 Aligned_cols=199 Identities=20% Similarity=0.160 Sum_probs=139.7
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHHHHHHHh
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 395 (612)
.+|.++++|+..++.+.+ .|++.+ ++.+++|++ |...+.+.. .....+++++
T Consensus 141 ~ad~~~~~s~~~~~~l~~---~G~~~~------~I~vign~~~d~~~~~~~~------------------~~~~~~~~~~ 193 (365)
T TIGR00236 141 IADLHFAPTEQAKDNLLR---ENVKAD------SIFVTGNTVIDALLTNVEI------------------AYSSPVLSEF 193 (365)
T ss_pred HHHhccCCCHHHHHHHHH---cCCCcc------cEEEeCChHHHHHHHHHhh------------------ccchhHHHhc
Confidence 589999999999999986 687765 899999996 432221110 0123445566
Q ss_pred CCCCCCCCcEEEEEc-Ccc-cccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007224 396 GLPVDRNIPVIGFIG-RLE-EQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 396 gl~~~~~~~~il~iG-rl~-~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~ 471 (612)
+. +.+++++.+ |.+ ..|+++.+++|+.++.+ +++++++.|.++......+.+.. ....++...........
T Consensus 194 ~~----~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 268 (365)
T TIGR00236 194 GE----DKRYILLTLHRRENVGEPLENIFKAIREIVEEFEDVQIVYPVHLNPVVREPLHKHL-GDSKRVHLIEPLEYLDF 268 (365)
T ss_pred CC----CCCEEEEecCchhhhhhHHHHHHHHHHHHHHHCCCCEEEEECCCChHHHHHHHHHh-CCCCCEEEECCCChHHH
Confidence 52 224555555 543 45899999999999854 58899988665433333333322 22235666655555556
Q ss_pred HHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 472 ~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
..+++.||+++.+| |..++|||+||+|+|++ +.|+..|++.++ .++++ +.|++++++++.++
T Consensus 269 ~~~l~~ad~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-----------~~d~~~i~~ai~~l 331 (365)
T TIGR00236 269 LNLAANSHLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-----------GTDKENITKAAKRL 331 (365)
T ss_pred HHHHHhCCEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-----------CCCHHHHHHHHHHH
Confidence 67999999999887 66789999999999996 678888888766 45543 47999999999999
Q ss_pred HHhhCHHHHHHHHHHH
Q 007224 551 LATYGTQALAEMMKNG 566 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~ 566 (612)
+++ ++.+.+++++.
T Consensus 332 l~~--~~~~~~~~~~~ 345 (365)
T TIGR00236 332 LTD--PDEYKKMSNAS 345 (365)
T ss_pred HhC--hHHHHHhhhcC
Confidence 987 66666665543
No 92
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=99.76 E-value=1.8e-16 Score=181.94 Aligned_cols=298 Identities=17% Similarity=0.218 Sum_probs=201.9
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCccc-ccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
++|.+|.+||+|..++|.+|+... .++++.|.+|. .||... |..+ .
T Consensus 230 ~~gD~VWVHDYHL~LlP~~LR~~~------p~~~IGfFlHi-----PFPs~Eifr~L----------------------P 276 (934)
T PLN03064 230 EEGDVVWCHDYHLMFLPKCLKEYN------SNMKVGWFLHT-----PFPSSEIHRTL----------------------P 276 (934)
T ss_pred CCCCEEEEecchhhHHHHHHHHhC------CCCcEEEEecC-----CCCChHHHhhC----------------------C
Confidence 454499999999999999999875 78999999993 343221 1111 1
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHcccc--CCccc--hhhh---hccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGED--KGVEL--DNII---RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g~~~--~~~~---~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
...-+-.++..||.|-+.+..+++.+.+... .|.+. ..+. +..++.++|-|||++.|......
T Consensus 277 ~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~~~v~~~Gr~v~V~~~PiGID~~~f~~~~~~---------- 346 (934)
T PLN03064 277 SRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDQGRLTRVAAFPIGIDSDRFIRALET---------- 346 (934)
T ss_pred cHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccCCeEEECCEEEEEEEEeCEEcHHHHHHHhcC----------
Confidence 1234456788999999999999887664211 12211 1110 12357788999999888643210
Q ss_pred hhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CC----cEEEEEeC-----Cc--hhHH
Q 007224 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--EN----VQIIVLGT-----GK--KPME 446 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~----~~lvivG~-----g~--~~~~ 446 (612)
..-....+.++++++ ++.+|+.++|++..||+...++|++++.+ |+ +.|+.+.. ++ ..++
T Consensus 347 --~~v~~~~~~lr~~~~-----g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~ 419 (934)
T PLN03064 347 --PQVQQHIKELKERFA-----GRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLT 419 (934)
T ss_pred --hhHHHHHHHHHHHhC-----CceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHH
Confidence 001112345676665 45799999999999999999999998754 44 33443332 22 1234
Q ss_pred HHHHHHHHH----CCC----ceEEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCC----ceEEcCCCCcc
Q 007224 447 KQLEQLEIL----YPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT----VPIVASTGGLV 513 (612)
Q Consensus 447 ~~l~~l~~~----~~~----~i~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~----PvI~s~~gg~~ 513 (612)
.++.++..+ ++. -+.... .++.+++..+|+.||++|+||..||++++..|+|+|+. ++|.|...|..
T Consensus 420 ~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa 499 (934)
T PLN03064 420 SQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAA 499 (934)
T ss_pred HHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchH
Confidence 445554443 321 022222 24677778899999999999999999999999999944 45558888888
Q ss_pred cceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHH
Q 007224 514 DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 514 e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+.+ +..++++ .|.|+++++++|.+++..+ .+.++++.++. ....+||...++.+++-+....
T Consensus 500 ~~L--~~~AllV----------NP~D~~~vA~AI~~AL~M~-~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~ 563 (934)
T PLN03064 500 QSL--GAGAILV----------NPWNITEVAASIAQALNMP-EEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTV 563 (934)
T ss_pred HHh--CCceEEE----------CCCCHHHHHHHHHHHHhCC-HHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHH
Confidence 777 3357876 9999999999999999863 33334333333 3577899999998887777664
No 93
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.72 E-value=1.2e-15 Score=157.14 Aligned_cols=223 Identities=28% Similarity=0.444 Sum_probs=168.6
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhC
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 396 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g 396 (612)
..+.+++.+......+.. ... ..++..++|+++...+.+. ...
T Consensus 150 ~~~~~~~~~~~~~~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~---------------------------~~~ 192 (381)
T COG0438 150 LADRVIAVSPALKELLEA---LGV-------PNKIVVIPNGIDTEKFAPA---------------------------RIG 192 (381)
T ss_pred cccEEEECCHHHHHHHHH---hCC-------CCCceEecCCcCHHHcCcc---------------------------ccC
Confidence 378889999887555543 111 1157889999998877642 011
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccC--CcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHH
Q 007224 397 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE--NVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAH 472 (612)
Q Consensus 397 l~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~--~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~ 472 (612)
+..+.....++++||+.+.||++.+++++..+... ++.++++|.+... ...+..+..+.. .++.+.+..+.+...
T Consensus 193 ~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 271 (381)
T COG0438 193 LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER-REELEKLAKKLGLEDNVKFLGYVPDEELA 271 (381)
T ss_pred CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc-HHHHHHHHHHhCCCCcEEEecccCHHHHH
Confidence 11111136899999999999999999999999763 4899999998853 233333444443 346665555645666
Q ss_pred HHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
.+++.||++++||.+|+||++++|||++|+|||+++.++..|++.++.+|+++ .+.|.+++++++..+++
T Consensus 272 ~~~~~~~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~----------~~~~~~~~~~~i~~~~~ 341 (381)
T COG0438 272 ELLASADVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLV----------PPGDVEELADALEQLLE 341 (381)
T ss_pred HHHHhCCEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEec----------CCCCHHHHHHHHHHHhc
Confidence 68999999999999999999999999999999999999999999998778854 66689999999999998
Q ss_pred hhCHHHHHHHHH---HHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMK---NGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 553 ~~~~~~~~~~~~---~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+. +.+..+.+ +.....|+|+..++++.+++..+..
T Consensus 342 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (381)
T COG0438 342 DP--ELREELGEAARERVEEEFSWERIAEQLLELYEELLA 379 (381)
T ss_pred CH--HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 83 33444443 2234799999999999999988753
No 94
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.71 E-value=2.1e-15 Score=150.07 Aligned_cols=223 Identities=15% Similarity=0.146 Sum_probs=167.8
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
-..||.+++.|.+..+.+.+ .++.. ..++++...+++.+ .+.
T Consensus 220 G~~ad~vm~NssWT~nHI~q--iW~~~--------~~~iVyPPC~~e~l----------------------------ks~ 261 (465)
T KOG1387|consen 220 GSKADIVMTNSSWTNNHIKQ--IWQSN--------TCSIVYPPCSTEDL----------------------------KSK 261 (465)
T ss_pred cccceEEEecchhhHHHHHH--Hhhcc--------ceeEEcCCCCHHHH----------------------------HHH
Confidence 34789999999999888775 23321 56667666665433 333
Q ss_pred hCCCCCCCCcEEEEEcCcccccCHH-HHHHHHHhccc------CCcEEEEEeCCc----hhHHHHHHHHHHHCC--CceE
Q 007224 395 VGLPVDRNIPVIGFIGRLEEQKGSD-ILAAAIPHFIK------ENVQIIVLGTGK----KPMEKQLEQLEILYP--EKAR 461 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~~~Kg~d-~ll~a~~~l~~------~~~~lvivG~g~----~~~~~~l~~l~~~~~--~~i~ 461 (612)
.+- .+.+.+.++++|.+.|.|++. +-++|+-.... .+++|+|+|+-. .+.-+.++.++.++. .++.
T Consensus 262 ~~t-e~~r~~~ll~l~Q~RPEKnH~~Lql~Al~~~~~pl~a~~~~iKL~ivGScRneeD~ervk~Lkd~a~~L~i~~~v~ 340 (465)
T KOG1387|consen 262 FGT-EGERENQLLSLAQFRPEKNHKILQLFALYLKNEPLEASVSPIKLIIVGSCRNEEDEERVKSLKDLAEELKIPKHVQ 340 (465)
T ss_pred hcc-cCCcceEEEEEeecCcccccHHHHHHHHHHhcCchhhccCCceEEEEeccCChhhHHHHHHHHHHHHhcCCccceE
Confidence 333 334668999999999999999 33445444433 479999999942 344566677776654 5677
Q ss_pred EEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc-cceec---CceEEEecccccccCCCCC
Q 007224 462 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-DTVEE---GFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 462 ~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e~v~~---g~~G~l~~~~~~~~~~v~~ 537 (612)
+....+-+.+-.++..|.+.|..-..|.||+.+.|+||+|+-+|+.+.||.. |+|.+ ..+||+.
T Consensus 341 F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla------------ 408 (465)
T KOG1387|consen 341 FEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLA------------ 408 (465)
T ss_pred EEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeec------------
Confidence 7777788888889999999999999999999999999999999999987744 77765 3689974
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHH
Q 007224 538 VDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 538 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
.+.++.++++.+++.. +.+.+..|.+++. ..+|+-....+.|...+.+++.
T Consensus 409 ~t~~EYaE~iLkIv~~-~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~kll~ 461 (465)
T KOG1387|consen 409 PTDEEYAEAILKIVKL-NYDERNMMRRNARKSLARFGELKFDKDWENPICKLLE 461 (465)
T ss_pred CChHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHHhhc
Confidence 6888999999999986 2444566666653 5789999999999998888874
No 95
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=2.1e-13 Score=136.04 Aligned_cols=300 Identities=17% Similarity=0.181 Sum_probs=187.6
Q ss_pred CCcEEEEecCCcc--chHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCC
Q 007224 228 GEDVVFVANDWHT--SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRG 305 (612)
Q Consensus 228 ~pDvvih~h~~~~--~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (612)
.+| +|..++..+ .++.+.+.... .+++.++..||..|. . .+++ ..+...|+..
T Consensus 103 ~~~-~ilvQNPP~iPtliv~~~~~~l------~~~KfiIDWHNy~Ys-l-------~l~~----------~~g~~h~lV~ 157 (444)
T KOG2941|consen 103 PPD-IILVQNPPSIPTLIVCVLYSIL------TGAKFIIDWHNYGYS-L-------QLKL----------KLGFQHPLVR 157 (444)
T ss_pred CCc-EEEEeCCCCCchHHHHHHHHHH------hcceEEEEehhhHHH-H-------HHHh----------hcCCCCchHH
Confidence 689 666665443 44555555444 799999999998772 0 0111 1122223222
Q ss_pred cchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-----ccCc----cCCCCccccccccC
Q 007224 306 RKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-----DVQE----WNPLTDKYIGVKYD 376 (612)
Q Consensus 306 ~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-----d~~~----~~p~~~~~~~~~~~ 376 (612)
.....++..-+.||.-+||++.+++++... +|+. +..+++.-- ++++ |.+....+ ..|-
T Consensus 158 l~~~~E~~fgk~a~~nLcVT~AMr~dL~qn--Wgi~--------ra~v~YDrPps~~~~l~~~H~lf~~l~~d~--~~f~ 225 (444)
T KOG2941|consen 158 LVRWLEKYFGKLADYNLCVTKAMREDLIQN--WGIN--------RAKVLYDRPPSKPTPLDEQHELFMKLAGDH--SPFR 225 (444)
T ss_pred HHHHHHHHhhcccccchhhHHHHHHHHHHh--cCCc--------eeEEEecCCCCCCCchhHHHHHHhhhcccc--chhh
Confidence 223334555668999999999999998863 7764 334444211 1111 22211000 0000
Q ss_pred cchhhcchHHHHHHHHHHhC--C-CCCCCC-cEEEEEcCcccccCHHHHHHHHHhcc-----c----CCcEEEEEeCCch
Q 007224 377 ASTVMDAKPLLKEALQAEVG--L-PVDRNI-PVIGFIGRLEEQKGSDILAAAIPHFI-----K----ENVQIIVLGTGKK 443 (612)
Q Consensus 377 ~~~~~~~~~~~k~~l~~~~g--l-~~~~~~-~~il~iGrl~~~Kg~d~ll~a~~~l~-----~----~~~~lvivG~g~~ 443 (612)
.+..+.+..+..++-++.. . ...++. .+++.....++..++.+|++|+.... + |.+-++|.|+|+
T Consensus 226 -ar~~q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGP- 303 (444)
T KOG2941|consen 226 -AREPQDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGP- 303 (444)
T ss_pred -hcccccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCc-
Confidence 0112333333333333322 0 001122 35666678999999999999998442 1 578888999998
Q ss_pred hHHHHHHHHHHHCC-CceEEEe-ccChHHHHHHHHhcCEEEeC--CCC-CCCcHHHHHHHHcCCceEEcCCCCcccceec
Q 007224 444 PMEKQLEQLEILYP-EKARGVA-KFNIPLAHMIIAGADFILIP--SRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518 (612)
Q Consensus 444 ~~~~~l~~l~~~~~-~~i~~~~-~~~~~~~~~~l~~adi~l~p--S~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 518 (612)
.++...+.+.+++ .++.... +...++.+.+++.||+.|+- |.. =-.|++++....||+||++-+...+.|+|+|
T Consensus 304 -lkE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fkcl~ELVkh 382 (444)
T KOG2941|consen 304 -LKEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFKCLDELVKH 382 (444)
T ss_pred -hhHHHHHHHHHhcccceeeeecccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecchhHHHHHhc
Confidence 4444444444444 2343333 44677888899999998764 332 2479999999999999999999999999999
Q ss_pred CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC--HHHHHHHHHHHH-HhcCCcHHHHHH
Q 007224 519 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGM-AQDLSWKGPAKK 579 (612)
Q Consensus 519 g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~--~~~~~~~~~~~~-~~~~sw~~~a~~ 579 (612)
++||++| .|.+++++.+..+.++.. ...+.+..++.. .+..+|+..-++
T Consensus 383 ~eNGlvF------------~Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e~RW~~~W~~ 434 (444)
T KOG2941|consen 383 GENGLVF------------EDSEELAEQLQMLFKNFPDNADELNQLKKNLREEQELRWDESWER 434 (444)
T ss_pred CCCceEe------------ccHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHhhhHHHHHHH
Confidence 9999998 799999999999999542 456666666665 366777654433
No 96
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.58 E-value=6.8e-13 Score=142.32 Aligned_cols=191 Identities=15% Similarity=0.078 Sum_probs=121.6
Q ss_pred HHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHH
Q 007224 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l 391 (612)
+...+.+|+|++.++...+.+.. +|. +..++.|++-........ .+...
T Consensus 133 r~l~~~~d~v~~~~~~e~~~~~~---~g~---------~~~~vGnPv~~~~~~~~~-------------------~~~~~ 181 (385)
T TIGR00215 133 KKIEKATDFLLAILPFEKAFYQK---KNV---------PCRFVGHPLLDAIPLYKP-------------------DRKSA 181 (385)
T ss_pred HHHHHHHhHhhccCCCcHHHHHh---cCC---------CEEEECCchhhhccccCC-------------------CHHHH
Confidence 44566899999999988887764 332 455677776322111000 14456
Q ss_pred HHHhCCCCCCCCcEEEEEc--Cccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEe
Q 007224 392 QAEVGLPVDRNIPVIGFIG--RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVA 464 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iG--rl~~-~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~ 464 (612)
++++|++. +.++|+++| |..+ .|+.+.++++++.+.+ +++++++.+.+.. ....++++...++ ..+...
T Consensus 182 r~~lgl~~--~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-~~~~~~~~~~~~~~~~~v~~~- 257 (385)
T TIGR00215 182 REKLGIDH--NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-RRLQFEQIKAEYGPDLQLHLI- 257 (385)
T ss_pred HHHcCCCC--CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-hHHHHHHHHHHhCCCCcEEEE-
Confidence 77888864 446776653 7776 7999999999998865 6788877654321 3444555555442 223322
Q ss_pred ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CCCcc----------------cceecCceEEEecc
Q 007224 465 KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGGLV----------------DTVEEGFTGFQMGS 527 (612)
Q Consensus 465 ~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg~~----------------e~v~~g~~G~l~~~ 527 (612)
.. ....+|+.||++|.+| |.+.+|+|++|+|+|... +..+. .++.+..-..-
T Consensus 258 --~~-~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~~~~~pe--- 326 (385)
T TIGR00215 258 --DG-DARKAMFAADAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILANRLLVPE--- 326 (385)
T ss_pred --Cc-hHHHHHHhCCEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcCCccchh---
Confidence 22 2346999999999999 888889999999999883 22222 22222111110
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 528 FSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+ +-+..+++.+++.+.+++.+
T Consensus 327 l-----~q~~~~~~~l~~~~~~ll~~ 347 (385)
T TIGR00215 327 L-----LQEECTPHPLAIALLLLLEN 347 (385)
T ss_pred h-----cCCCCCHHHHHHHHHHHhcC
Confidence 0 11455789999999999987
No 97
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=99.57 E-value=8.5e-15 Score=132.85 Aligned_cols=130 Identities=29% Similarity=0.390 Sum_probs=94.2
Q ss_pred CcEEEEEcCcccccCHHHHHH-HHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 403 IPVIGFIGRLEEQKGSDILAA-AIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~-a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
.++|+++|++.+.|+++.+++ +++++.+ ++++|+|+|.+++ +++++ .. .++.+.+.. ++..++++.||
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~----~l~~~-~~--~~v~~~g~~--~e~~~~l~~~d 72 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPD----ELKRL-RR--PNVRFHGFV--EELPEILAAAD 72 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-----HHCCH-HH--CTEEEE-S---HHHHHHHHC-S
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHH----HHHHh-cC--CCEEEcCCH--HHHHHHHHhCC
Confidence 368999999999999999999 9999865 7899999999775 25554 22 247777766 45778999999
Q ss_pred EEEeCCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 480 FILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 480 i~l~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+++.|+. .|+++++++|||++|+|||+++. +..+++.....|.++ ++|+++++++|.++++|
T Consensus 73 v~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-----------~~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 73 VGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-----------ANDPEELAEAIERLLND 135 (135)
T ss_dssp EEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE------------TT-HHHHHHHHHHHHH-
T ss_pred EEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-----------CCCHHHHHHHHHHHhcC
Confidence 9999996 47899999999999999999998 677777666667652 67999999999999875
No 98
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=99.49 E-value=7e-12 Score=136.49 Aligned_cols=315 Identities=17% Similarity=0.205 Sum_probs=176.6
Q ss_pred hHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCc
Q 007224 198 QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF 277 (612)
Q Consensus 198 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~ 277 (612)
+..|....+...+.+... +++|.+|..||+|..++|.+++... +++++.|.+|. .||.
T Consensus 121 w~~Y~~vN~~FA~~i~~~-----------~~~~D~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHi-----PFPs 178 (474)
T PF00982_consen 121 WEAYKRVNRRFADAIAEV-----------YRPGDLVWVHDYHLMLLPQMLRERG------PDARIGFFLHI-----PFPS 178 (474)
T ss_dssp HHHHHHHHHHHHHHHGGG-------------TT-EEEEESGGGTTHHHHHHHTT--------SEEEEEE-S---------
T ss_pred HHHHHHHHHHHHHHHHHh-----------CcCCCEEEEeCCcHHHHHHHHHhhc------CCceEeeEEec-----CCCC
Confidence 344555555555544432 2455599999999999999999875 68999999994 3332
Q ss_pred cc-ccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccc--cCCccchhh-------hh
Q 007224 278 ED-FGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDNI-------IR 347 (612)
Q Consensus 278 ~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~~~-------~~ 347 (612)
.+ |..+ .....+-.++..||.|-+.+..+++.+.+.. ..|.+...- =+
T Consensus 179 ~e~fr~l----------------------P~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~~v~~~Gr 236 (474)
T PF00982_consen 179 SEIFRCL----------------------PWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRGTVEYNGR 236 (474)
T ss_dssp HHHHTTS----------------------TTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE-EEETTE
T ss_pred HHHHhhC----------------------CcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCceEEECCE
Confidence 21 1111 1234556788899999999999988765421 222221110 01
Q ss_pred ccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHh
Q 007224 348 KTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPH 427 (612)
Q Consensus 348 ~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~ 427 (612)
...+.+.|-|+|++.+...... +.-....+.++++++- +..+|+-+.|++..||+..=+.|+++
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~------------~~v~~~~~~l~~~~~~----~~~ii~gvDrld~~kGi~~kl~Afe~ 300 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARS------------PEVQERAEELREKFKG----KRKIIVGVDRLDYTKGIPEKLRAFER 300 (474)
T ss_dssp EEEEEE------HHHHHHHHH-------------S---HHHHHHHHHTTT-----SEEEEEE--B-GGG-HHHHHHHHHH
T ss_pred EEEEEEeeccCChHHHHhhccC------------hHHHHHHHHHHHhcCC----CcEEEEEeccchhhcCHHHHHHHHHH
Confidence 2357778888888766421100 0011123456777651 24799999999999999999999999
Q ss_pred ccc------CCcEEEEEeCCc----h---hHHHHHHHHHH----HCCC-c---eEEEe-ccChHHHHHHHHhcCEEEeCC
Q 007224 428 FIK------ENVQIIVLGTGK----K---PMEKQLEQLEI----LYPE-K---ARGVA-KFNIPLAHMIIAGADFILIPS 485 (612)
Q Consensus 428 l~~------~~~~lvivG~g~----~---~~~~~l~~l~~----~~~~-~---i~~~~-~~~~~~~~~~l~~adi~l~pS 485 (612)
+.+ .++.|+-++... + .+..++++++. +++. . |.... ..+.+....+|+.||+++++|
T Consensus 301 fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTs 380 (474)
T PF00982_consen 301 FLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTS 380 (474)
T ss_dssp HHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--
T ss_pred HHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecc
Confidence 865 368888777632 2 23444444433 4442 1 33333 346677778999999999999
Q ss_pred CCCCCcHHHHHHHHcCCc----eEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 486 RFEPCGLIQLHAMRYGTV----PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 486 ~~E~~gl~~lEAma~G~P----vI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
..+|.-++..|+.+|-.. +|.|...|..+.+.++ .+++ .|.|++++|++|.++++.+..++...
T Consensus 381 lrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L~~~--al~V----------NP~d~~~~A~ai~~AL~M~~~Er~~r 448 (474)
T PF00982_consen 381 LRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQLSEA--ALLV----------NPWDIEEVADAIHEALTMPPEERKER 448 (474)
T ss_dssp SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT-TTS---EEE-----------TT-HHHHHHHHHHHHT--HHHHHHH
T ss_pred hhhccCCcceEEEEEecCCCCceEeeccCCHHHHcCCc--cEEE----------CCCChHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999999998554 6777777777777654 3655 99999999999999999853333333
Q ss_pred HHHHH-HHhcCCcHHHHHHHHHHH
Q 007224 562 MMKNG-MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 562 ~~~~~-~~~~~sw~~~a~~~~~~y 584 (612)
+.+.. ....++-..-++.+++-+
T Consensus 449 ~~~~~~~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 449 HARLREYVREHDVQWWAESFLRDL 472 (474)
T ss_dssp HHHHHHHHHHT-HHHHHHHHHHHH
T ss_pred HHHHHHHhHhCCHHHHHHHHHHHh
Confidence 32221 245566555555555443
No 99
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=99.48 E-value=1.2e-11 Score=133.24 Aligned_cols=297 Identities=14% Similarity=0.126 Sum_probs=199.7
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCccc-ccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+||.+|-.||+|..++|.+|+... .+.++.|.+|. .||..+ |..+ .
T Consensus 122 ~~~D~VWVHDYhL~llp~~LR~~~------~~~~IgFFlHi-----PFPs~eifr~L----------------------P 168 (474)
T PRK10117 122 KDDDIIWIHDYHLLPFASELRKRG------VNNRIGFFLHI-----PFPTPEIFNAL----------------------P 168 (474)
T ss_pred CCCCEEEEeccHhhHHHHHHHHhC------CCCcEEEEEeC-----CCCChHHHhhC----------------------C
Confidence 344499999999999999999875 68899999993 333221 1111 1
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHccc--cCCccch---hh---hhccCeEEeeCCCccCccCCCCccccccccCcc
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELD---NI---IRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAS 378 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~---~~---~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~ 378 (612)
....+-.++..+|.|-+-+..+++.+.+.. ..|.+.. .+ =+...+.+.|-|||++.|......
T Consensus 169 ~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~~~v~~~gr~v~v~~~PigID~~~~~~~a~~--------- 239 (474)
T PRK10117 169 PHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSGKSHTAWGKAFRTEVYPIGIEPDEIAKQAAG--------- 239 (474)
T ss_pred ChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCCCeEEECCeEEEEEEEECeEcHHHHHHHhhc---------
Confidence 123455678899999999999888766411 1122110 00 122467888999998877432110
Q ss_pred hhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCc-------hhH
Q 007224 379 TVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK-------KPM 445 (612)
Q Consensus 379 ~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~-------~~~ 445 (612)
. .....+.++++++ ++.+|+-+.|++..||+..=++|++++.+ .++.|+.+.... ..+
T Consensus 240 ---~-~~~~~~~lr~~~~-----~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l 310 (474)
T PRK10117 240 ---P-LPPKLAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDI 310 (474)
T ss_pred ---h-HHHHHHHHHHHcC-----CCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHH
Confidence 0 1112344666654 45699999999999999999999999875 367788776643 234
Q ss_pred HHHHHHHHHH----CCC-c---eEEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCC-----ceEEcCCCC
Q 007224 446 EKQLEQLEIL----YPE-K---ARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGG 511 (612)
Q Consensus 446 ~~~l~~l~~~----~~~-~---i~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg 511 (612)
+.+++++..+ ++. . +.... .++.+++..+|+.||+++++|..+|.-++..|+.+|-. +.|.|...|
T Consensus 311 ~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAG 390 (474)
T PRK10117 311 RHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG 390 (474)
T ss_pred HHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecCCCCccEEEecccc
Confidence 5555555443 331 0 22111 23667777899999999999999999999999999954 367777666
Q ss_pred cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhcCCcHHHHHHHHHHHHHHH
Q 007224 512 LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 512 ~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~-~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
..+.+.+ .+++ .|.|.++++++|.+++..+..++..++.... ....++-..-++.+++-+..+.
T Consensus 391 aA~~L~~---AllV----------NP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~ 455 (474)
T PRK10117 391 AANELTS---ALIV----------NPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIV 455 (474)
T ss_pred hHHHhCC---CeEE----------CCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhh
Confidence 6766642 5655 9999999999999999985444444433222 3456676666777776666553
No 100
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=99.47 E-value=2.3e-12 Score=142.17 Aligned_cols=162 Identities=13% Similarity=0.097 Sum_probs=132.2
Q ss_pred cEEEEEc--CcccccCHHHHHHHHHhccc--CCcEEEEEeCCch-hHHHHHHHHHHHCCC--------------------
Q 007224 404 PVIGFIG--RLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKK-PMEKQLEQLEILYPE-------------------- 458 (612)
Q Consensus 404 ~~il~iG--rl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~-~~~~~l~~l~~~~~~-------------------- 458 (612)
..+++++ |+ +.|.++.+++++.++.. |+++|.+.|.+.. .+.+.++++..+++.
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~L~~~gy~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYELKILTYNNDNDITQLLEDILEQINEEYNQDKNFFSLSEQDENQPI 398 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeEEEEEEecCchhHHHHHHHHHHHHHhhhchhhhccccchhhhhhhc
Confidence 4688888 99 99999999999999954 8999999999873 345555554433311
Q ss_pred ----------ceEEEecc-ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecc
Q 007224 459 ----------KARGVAKF-NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS 527 (612)
Q Consensus 459 ----------~i~~~~~~-~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~ 527 (612)
....+.++ +...+...|..+.++|.+|..|+|+ .++||++.|+|+| .-|..++|.+++||+++
T Consensus 399 ~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~~~V~d~~NG~li-- 472 (519)
T TIGR03713 399 LQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAGIPQI---NKVETDYVEHNKNGYII-- 472 (519)
T ss_pred ccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcCCCee---ecCCceeeEcCCCcEEe--
Confidence 12222333 3335668999999999999999999 9999999999999 45569999999999987
Q ss_pred cccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHH
Q 007224 528 FSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETL 584 (612)
Q Consensus 528 ~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y 584 (612)
+|..+|+++|..+|.+ ...+.++...++ .++||-+.+.++|.+++
T Consensus 473 ----------~d~~~l~~al~~~L~~--~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~~ 519 (519)
T TIGR03713 473 ----------DDISELLKALDYYLDN--LKNWNYSLAYSIKLIDDYSSENIIERLNELI 519 (519)
T ss_pred ----------CCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhhC
Confidence 7999999999999998 778888888874 69999999999998864
No 101
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=99.43 E-value=1e-12 Score=123.71 Aligned_cols=176 Identities=20% Similarity=0.202 Sum_probs=93.7
Q ss_pred EEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEEE
Q 007224 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVF 166 (612)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~ 166 (612)
|+++... .+. .||+++++.+|+++|+++||+|+++++..+.....- ...
T Consensus 1 ili~~~~-~~~--~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~~~~~~~----------------------------~~~ 49 (177)
T PF13439_consen 1 ILITNIF-LPN--IGGAERVVLNLARALAKRGHEVTVVSPGVKDPIEEE----------------------------LVK 49 (177)
T ss_dssp -EEECC--TTS--SSHHHHHHHHHHHHHHHTT-EEEEEESS-TTS-SST----------------------------EEE
T ss_pred CEEEEec-CCC--CChHHHHHHHHHHHHHHCCCEEEEEEcCCCccchhh----------------------------ccc
Confidence 4555554 453 899999999999999999999999998754332210 000
Q ss_pred EeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHH
Q 007224 167 VDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCY 246 (612)
Q Consensus 167 l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~ 246 (612)
.. .. ..+. ..............+.+.+++. +|| |||+|.+........
T Consensus 50 ~~-~~------------~~~~------~~~~~~~~~~~~~~~~~~i~~~------------~~D-iVh~~~~~~~~~~~~ 97 (177)
T PF13439_consen 50 IF-VK------------IPYP------IRKRFLRSFFFMRRLRRLIKKE------------KPD-IVHIHGPPAFWIALL 97 (177)
T ss_dssp E----------------TT-S------STSS--HHHHHHHHHHHHHHHH------------T-S-EEECCTTHCCCHHHH
T ss_pred ee-ee------------eecc------cccccchhHHHHHHHHHHHHHc------------CCC-eEEecccchhHHHHH
Confidence 00 00 0000 0111122223344555555554 599 889998776554433
Q ss_pred HHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCH
Q 007224 247 LKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSP 326 (612)
Q Consensus 247 l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~ 326 (612)
... ++|+++++|+...... ........ .......+++...+.+|.++++|+
T Consensus 98 ~~~---------~~~~v~~~H~~~~~~~-------~~~~~~~~-------------~~~~~~~~~~~~~~~~~~ii~vS~ 148 (177)
T PF13439_consen 98 ACR---------KVPIVYTIHGPYFERR-------FLKSKLSP-------------YSYLNFRIERKLYKKADRIIAVSE 148 (177)
T ss_dssp HHH---------CSCEEEEE-HHH--HH-------TTTTSCCC-------------HHHHHHCTTHHHHCCSSEEEESSH
T ss_pred hcc---------CCCEEEEeCCCccccc-------ccccccch-------------hhhhhhhhhhhHHhcCCEEEEECH
Confidence 331 6799999997553100 00000000 000111223444678999999999
Q ss_pred HHHHHHHccccCCccchhhhhccCeEEeeCCCccCcc
Q 007224 327 HYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW 363 (612)
Q Consensus 327 ~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~ 363 (612)
..++++.+ +|++.+ ++.+|+||+|++.|
T Consensus 149 ~~~~~l~~---~~~~~~------ki~vI~ngid~~~F 176 (177)
T PF13439_consen 149 STKDELIK---FGIPPE------KIHVIYNGIDTDRF 176 (177)
T ss_dssp HHHHHHHH---HT--SS-------EEE----B-CCCH
T ss_pred HHHHHHHH---hCCccc------CCEEEECCccHHHc
Confidence 99999996 676654 89999999999877
No 102
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=99.37 E-value=1.9e-12 Score=119.76 Aligned_cols=160 Identities=23% Similarity=0.208 Sum_probs=86.3
Q ss_pred ccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEEEEeChhhhhhhhcCC
Q 007224 101 GGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGK 180 (612)
Q Consensus 101 GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w~~ 180 (612)
||++.++.+|+++|+++||+|+++++..+...+. ...+|+.++.++.+....
T Consensus 1 GG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~------ 52 (160)
T PF13579_consen 1 GGIERYVRELARALAARGHEVTVVTPQPDPEDDE----------------------EEEDGVRVHRLPLPRRPW------ 52 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S----------------------EEETTEEEEEE--S-SSS------
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc----------------------cccCCceEEeccCCccch------
Confidence 8999999999999999999999999875433221 123466666554221100
Q ss_pred CCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCc
Q 007224 181 TQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSA 260 (612)
Q Consensus 181 ~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~ 260 (612)
.. .... +...+..++... ..+|| +||+|++..+++..+++.. .++
T Consensus 53 ----~~---------~~~~----~~~~~~~~l~~~----------~~~~D-vv~~~~~~~~~~~~~~~~~-------~~~ 97 (160)
T PF13579_consen 53 ----PL---------RLLR----FLRRLRRLLAAR----------RERPD-VVHAHSPTAGLVAALARRR-------RGI 97 (160)
T ss_dssp ----GG---------GHCC----HHHHHHHHCHHC----------T---S-EEEEEHHHHHHHHHHHHHH-------HT-
T ss_pred ----hh---------hhHH----HHHHHHHHHhhh----------ccCCe-EEEecccchhHHHHHHHHc-------cCC
Confidence 00 0011 112222333111 12799 9999997766666666633 489
Q ss_pred eEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCc
Q 007224 261 KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGV 340 (612)
Q Consensus 261 ~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~ 340 (612)
|+++++|+....... .+. ......+++..+..+|.++++|+..++.+.+ +|+
T Consensus 98 p~v~~~h~~~~~~~~------------~~~-------------~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~---~g~ 149 (160)
T PF13579_consen 98 PLVVTVHGTLFRRGS------------RWK-------------RRLYRWLERRLLRRADRVIVVSEAMRRYLRR---YGV 149 (160)
T ss_dssp -EEEE-SS-T------------------HH-------------HHHHHHHHHHHHHH-SEEEESSHHHHHHHHH---H--
T ss_pred cEEEEECCCchhhcc------------chh-------------hHHHHHHHHHHHhcCCEEEECCHHHHHHHHH---hCC
Confidence 999999964321100 000 0011244577888999999999999999996 777
Q ss_pred cchhhhhccCeEEeeCC
Q 007224 341 ELDNIIRKTGIKGIVNG 357 (612)
Q Consensus 341 ~~~~~~~~~~i~vI~Ng 357 (612)
+.+ ++.+||||
T Consensus 150 ~~~------ri~vipnG 160 (160)
T PF13579_consen 150 PPD------RIHVIPNG 160 (160)
T ss_dssp -GG------GEEE----
T ss_pred CCC------cEEEeCcC
Confidence 766 99999998
No 103
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=99.33 E-value=4.3e-11 Score=133.06 Aligned_cols=415 Identities=19% Similarity=0.203 Sum_probs=256.9
Q ss_pred CccccccHHHHhhhhHHHHHhCCCeEEEEeecCCc-c-------------cccCCcc------------EE--EEEEeCC
Q 007224 96 PWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ-Y-------------KDAWDTD------------VV--IELKVGD 147 (612)
Q Consensus 96 P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~-~-------------~~~~~~~------------~~--~~~~~~~ 147 (612)
|-. .||+|+........++..|...+.+.-+|.+ + ++.|... .. ..+...+
T Consensus 111 p~l-gGGLGrLAgcfldS~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~~a~~~d~~V~g~~ 189 (750)
T COG0058 111 PGL-GGGLGRLAGCFLDSAADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDAEGVPYDVPVPGYD 189 (750)
T ss_pred ccc-cccHHHHHHhHHHHHHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeecccCCceeeeeEEecc
Confidence 543 4999999999999999999999988876552 1 1223210 11 2233333
Q ss_pred -eeeEEEEEEeeecCceEEEEeChhhhhhhhc-CCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhc-cCCCCCCC
Q 007224 148 -KIEKVRFFHCHKRGVDRVFVDHPWFLAKVVW-GKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILN-LNSNKYFS 224 (612)
Q Consensus 148 -~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w-~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~ 224 (612)
....++.+......+++++.+...--.+ .| .+-...+|++.+ -...+.+-.+++.+.++.+..+. ...
T Consensus 190 ~~~~~lrlW~a~~~~~~~~l~~~n~~e~~-~~~~~iT~~LYp~Ds---~elRl~Qeyfl~~agvq~I~~~~~~~~----- 260 (750)
T COG0058 190 NRVVTLRLWQAQVGRVPLYLLDFNVGENK-NDARNITRVLYPGDS---KELRLKQEYFLGSAGVQDILARGHLEH----- 260 (750)
T ss_pred CcEEEEEEEEEecCccceEeecCCCcccc-hhhhhHHhhcCCCCc---HHHHHhhhheeeeHHHHHHHHHhhhcc-----
Confidence 4556777776666667777763221111 11 112245777532 12223334567777777766652 110
Q ss_pred CCCCCcEEEEecCCccchHHHHHHH-hhcCCCC-------CCCceEEEEEecCcccc--cCCcccccccC-----CCccc
Q 007224 225 GPYGEDVVFVANDWHTSLIPCYLKT-MYKPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLN-----LPAQF 289 (612)
Q Consensus 225 ~~~~pDvvih~h~~~~~~~~~~l~~-~~~~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~-----l~~~~ 289 (612)
+.+.+- +.|.||-|.+++..-+-+ ..-..|+ ....-.+||.|.+...+ .|+...+..+. .....
T Consensus 261 ~~~~~~-~~~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~~l~~~~lpr~~~ii~~i 339 (750)
T COG0058 261 HDLDVL-ADHLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPVELFKKLLPRHLQIIYEI 339 (750)
T ss_pred ccccch-hhhhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCHHHHHHHhhhhhhhHHHH
Confidence 012344 778999998876655444 2211111 12346799999876544 45544432111 11100
Q ss_pred cccc----ccccCC-----CCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccc---cCCccchhhhhccCeEEeeCC
Q 007224 290 KSSF----DFIDGY-----NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIVNG 357 (612)
Q Consensus 290 ~~~~----~~~~~~-----~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~Ng 357 (612)
...| ...... ..+... .++--.++..|..+..||+-+.+.+.+.. .+++. +.++.-+.||
T Consensus 340 n~~~l~~~~~~~~~~~~~~~~~i~~--v~Ma~lal~~S~~vNGVsklH~el~k~~~~~~~~~~~------p~~i~nvTNG 411 (750)
T COG0058 340 NARFLPEVRLLYLGDLIRRGSPIEE--VNMAVLALVGSHSVNGVSKLHSELSKKMWFADFHGLY------PEKINNVTNG 411 (750)
T ss_pred HhhhhHHHHhhccccccccCCcccc--eehhhhhhhhhhhhHhHHHHHHHHHHHHHHHHhcccC------ccccccccCC
Confidence 0000 000000 000000 34444567788889999988777665421 12222 3488999999
Q ss_pred CccCccCCCCccccccccCcc--------------------------hhhcchHHHHHH----HHHHhCCCCCCCCcEEE
Q 007224 358 MDVQEWNPLTDKYIGVKYDAS--------------------------TVMDAKPLLKEA----LQAEVGLPVDRNIPVIG 407 (612)
Q Consensus 358 vd~~~~~p~~~~~~~~~~~~~--------------------------~~~~~~~~~k~~----l~~~~gl~~~~~~~~il 407 (612)
|....|--...+.+..-|+.. .+...|..+|+. +..+.|+..+++...++
T Consensus 412 It~rrWl~~~n~~L~~~~~~~ig~~W~~~~~~l~~l~~~a~~~~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~ 491 (750)
T COG0058 412 ITPRRWLAPANPGLADLLDEKIGDEWLNDLDILDELLWFADDKAFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDG 491 (750)
T ss_pred cCCchhhhhhhHHHHHHHhhhhhhhhhhhhhhhhHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceee
Confidence 999888544444444444444 223344444433 44566888889999999
Q ss_pred EEcCcccccCHHHHHHHHHhc----cc---CCcEEEEEeCCch------hHHHHHHHHHHHCC--CceEEEeccChHHHH
Q 007224 408 FIGRLEEQKGSDILAAAIPHF----IK---ENVQIIVLGTGKK------PMEKQLEQLEILYP--EKARGVAKFNIPLAH 472 (612)
Q Consensus 408 ~iGrl~~~Kg~d~ll~a~~~l----~~---~~~~lvivG~g~~------~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~ 472 (612)
++-|+.++|+..+.+.-+..+ ++ +.+++++.|+..+ .+.+.+...+...+ .+|.++..++...+.
T Consensus 492 ~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y~~aK~iIk~I~~~a~~in~~lkVvFl~nYdvslA~ 571 (750)
T COG0058 492 QARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPADYAAKEIIKLINDVADVINNKLKVVFLPNYDVSLAE 571 (750)
T ss_pred eehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcchHHHHHHHHHHHHHHhhcccceEEEeCCCChhHHH
Confidence 999999999988876555444 32 5688888898653 23344444444432 468888899999999
Q ss_pred HHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCccccee--cCceEEEecccc
Q 007224 473 MIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFS 529 (612)
Q Consensus 473 ~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~l~~~~~ 529 (612)
.++.+||+-...|+. |++|++-+-+|..|.+.|+|-.|..+|+.+ .+.|||+||...
T Consensus 572 ~iipa~Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG~~~ 632 (750)
T COG0058 572 LLIPAADVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFGETV 632 (750)
T ss_pred hhcccccccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeCCch
Confidence 999999999999875 999999999999999999999999999997 789999998654
No 104
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=99.31 E-value=5.4e-10 Score=129.59 Aligned_cols=296 Identities=15% Similarity=0.175 Sum_probs=193.7
Q ss_pred cEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCcch
Q 007224 230 DVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKI 308 (612)
Q Consensus 230 Dvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 308 (612)
| +|..||+|..++|.+|+... .++++.|.+|. .||...+ ..+ ...
T Consensus 203 d-~VWVhDYhL~llP~~LR~~~------~~~~IgfFlHi-----PFPs~eifr~L----------------------P~r 248 (854)
T PLN02205 203 D-FVWIHDYHLMVLPTFLRKRF------NRVKLGFFLHS-----PFPSSEIYKTL----------------------PIR 248 (854)
T ss_pred C-EEEEeCchhhHHHHHHHhhC------CCCcEEEEecC-----CCCChHHHhhC----------------------CcH
Confidence 6 99999999999999998875 78999999993 3443211 111 122
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccc--cCCccchh-----hh----hccCeEEeeCCCccCccCCCCccccccccCc
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGE--DKGVELDN-----II----RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 377 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~~~-----~~----~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~ 377 (612)
.-+-.++..||.|-+.+..+++.+.+.. ..|.+.+. .+ +..++.+.|-|||...|......
T Consensus 249 ~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~-------- 320 (854)
T PLN02205 249 EELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL-------- 320 (854)
T ss_pred HHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC--------
Confidence 3445678899999999999988766511 12222111 00 23467788999998877432110
Q ss_pred chhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCc-------hh
Q 007224 378 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK-------KP 444 (612)
Q Consensus 378 ~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~~~lvivG~g~-------~~ 444 (612)
.......++++++++- +++.+|+-+.|++..||+..=+.|++++.+ | ++.|+.+.... ..
T Consensus 321 ----~~~~~~~~~l~~~~~~---~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~ 393 (854)
T PLN02205 321 ----PETEAKVKELIKQFCD---QDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKE 393 (854)
T ss_pred ----hhHHHHHHHHHHHhcc---CCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHH
Confidence 0011123456666542 245799999999999999999999999865 3 66788776532 23
Q ss_pred HHHHHHHHHH----HCCC----ceEEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCC-------------
Q 007224 445 MEKQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT------------- 502 (612)
Q Consensus 445 ~~~~l~~l~~----~~~~----~i~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~------------- 502 (612)
++.+++++.. +++. -|.... .++.++.-.+|+.||+++++|..+|.-++..|+.+|..
T Consensus 394 ~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~ 473 (854)
T PLN02205 394 VQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEP 473 (854)
T ss_pred HHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCcccccccccccc
Confidence 4444444443 4432 133332 24667777899999999999999999999999998743
Q ss_pred ------ceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH-HHhcCCcHH
Q 007224 503 ------VPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKG 575 (612)
Q Consensus 503 ------PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~-~~~~~sw~~ 575 (612)
+.|.|..-|....+. + .++ |.|.|+++++++|.+++..+..++..++.+.. ....++-..
T Consensus 474 ~~~~~gvLiLSEfaGaa~~L~-~--Ai~----------VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~ 540 (854)
T PLN02205 474 STPKKSMLVVSEFIGCSPSLS-G--AIR----------VNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGY 540 (854)
T ss_pred ccCCCCceEeeeccchhHHhC-c--CeE----------ECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHH
Confidence 245555444444443 2 454 49999999999999999985444443333222 235566666
Q ss_pred HHHHHHHHHHHH
Q 007224 576 PAKKWEETLLNL 587 (612)
Q Consensus 576 ~a~~~~~~y~~l 587 (612)
-++.++.-+++.
T Consensus 541 W~~~fl~~l~~~ 552 (854)
T PLN02205 541 WARSFLQDLERT 552 (854)
T ss_pred HHHHHHHHHHHH
Confidence 666666655554
No 105
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1.6e-09 Score=116.40 Aligned_cols=316 Identities=17% Similarity=0.190 Sum_probs=201.4
Q ss_pred hhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCC
Q 007224 197 NQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFA 276 (612)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~ 276 (612)
.+..|....++..+.+... |+++.+|..||+|..++|.+++... .+.++.|.+|. .||
T Consensus 126 ~w~~Y~~vN~~FAd~i~~~-----------~~~gDiIWVhDYhL~L~P~mlR~~~------~~~~IgfFlHi-----PfP 183 (486)
T COG0380 126 WWDAYVKVNRKFADKIVEI-----------YEPGDIIWVHDYHLLLVPQMLRERI------PDAKIGFFLHI-----PFP 183 (486)
T ss_pred HHHHHHHHHHHHHHHHHHh-----------cCCCCEEEEEechhhhhHHHHHHhC------CCceEEEEEeC-----CCC
Confidence 3455666666655554443 2333399999999999999999876 78899999993 333
Q ss_pred cccc-cccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHcccc--CC------ccchhh-h
Q 007224 277 FEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGED--KG------VELDNI-I 346 (612)
Q Consensus 277 ~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~--~g------~~~~~~-~ 346 (612)
...+ ..+ ....-+-.++..+|.|-+.++.+++.+.+... .+ +..... -
T Consensus 184 ssEvfr~l----------------------P~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~~~~~~~~~~~ 241 (486)
T COG0380 184 SSEVFRCL----------------------PWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGDADIRFNGADG 241 (486)
T ss_pred CHHHHhhC----------------------chHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhccccccccccccccCC
Confidence 3211 111 01223345778999999999999887654211 11 110000 0
Q ss_pred hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHH
Q 007224 347 RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIP 426 (612)
Q Consensus 347 ~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~ 426 (612)
+..++..+|-|+|+..|.-.... ..-.....+++++++- ++.+|+.+.|++.-||+..=+.|++
T Consensus 242 ~~v~v~a~PIgID~~~~~~~~~~------------~~v~~~~~el~~~~~~----~~kiivgvDRlDy~kGi~~rl~Afe 305 (486)
T COG0380 242 RIVKVGAFPIGIDPEEFERALKS------------PSVQEKVLELKAELGR----NKKLIVGVDRLDYSKGIPQRLLAFE 305 (486)
T ss_pred ceEEEEEEeeecCHHHHHHhhcC------------CchhhHHHHHHHHhcC----CceEEEEehhcccccCcHHHHHHHH
Confidence 11367788999999887543210 0000123455555542 3679999999999999999999999
Q ss_pred hccc------CCcEEEEEeCCc----h---hHHHHHHHHHH----HCCC----ceEEEe-ccChHHHHHHHHhcCEEEeC
Q 007224 427 HFIK------ENVQIIVLGTGK----K---PMEKQLEQLEI----LYPE----KARGVA-KFNIPLAHMIIAGADFILIP 484 (612)
Q Consensus 427 ~l~~------~~~~lvivG~g~----~---~~~~~l~~l~~----~~~~----~i~~~~-~~~~~~~~~~l~~adi~l~p 484 (612)
+|.. .++.++.++... + .+..+++++.. +++. -+.++- ..+.+++.+++..||+++++
T Consensus 306 ~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVt 385 (486)
T COG0380 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVT 385 (486)
T ss_pred HHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeec
Confidence 9975 367888888754 2 24444444444 4442 122221 24667777899999999999
Q ss_pred CCCCCCcHHHHHHHHc----CCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 485 SRFEPCGLIQLHAMRY----GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 485 S~~E~~gl~~lEAma~----G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
|..+|.-++..|+.+| +-|.|-|...|....+.+ .+++ .|.|.++++++|.++|..+.+++.+
T Consensus 386 plrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L~~---AliV----------NP~d~~~va~ai~~AL~m~~eEr~~ 452 (486)
T COG0380 386 PLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASELRD---ALIV----------NPWDTKEVADAIKRALTMSLEERKE 452 (486)
T ss_pred cccccccHHHHHHHHhhcCCCCcEEEeccccchhhhcc---CEeE----------CCCChHHHHHHHHHHhcCCHHHHHH
Confidence 9999999999999987 335666665555555554 4655 9999999999999999985333322
Q ss_pred HHHHHH-HHhcCCcHHHHHHHHHHHH
Q 007224 561 EMMKNG-MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 561 ~~~~~~-~~~~~sw~~~a~~~~~~y~ 585 (612)
++..-. ....++-...+..+++-+.
T Consensus 453 r~~~~~~~v~~~d~~~W~~~fl~~la 478 (486)
T COG0380 453 RHEKLLKQVLTHDVARWANSFLDDLA 478 (486)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 222211 1344555555555444443
No 106
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.21 E-value=2e-08 Score=106.47 Aligned_cols=167 Identities=16% Similarity=0.169 Sum_probs=95.8
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCH-HHHHHHHHhcccCCcEEEE-EeCCchhHHHHHHHHHHHCCCceEEEecc
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGS-DILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKF 466 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~-d~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~i~~~~~~ 466 (612)
+..++.++++. ++++|+.+|.=.--+.+ +.+.+++..+. .++++++ +|... +++.+.. +.. +. ...|
T Consensus 173 ~~~~~~~~l~~--~~~~iLv~GGS~Ga~~in~~~~~~l~~l~-~~~~vv~~~G~~~--~~~~~~~----~~~-~~-~~~f 241 (352)
T PRK12446 173 EKGLAFLGFSR--KKPVITIMGGSLGAKKINETVREALPELL-LKYQIVHLCGKGN--LDDSLQN----KEG-YR-QFEY 241 (352)
T ss_pred hHHHHhcCCCC--CCcEEEEECCccchHHHHHHHHHHHHhhc-cCcEEEEEeCCch--HHHHHhh----cCC-cE-Eecc
Confidence 34456677753 45677666543333444 34445555553 3477665 44332 4443332 121 22 2244
Q ss_pred ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC-----C----cccceecCceEEEecccccccCCCCC
Q 007224 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG-----G----LVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g-----g----~~e~v~~g~~G~l~~~~~~~~~~v~~ 537 (612)
..+.++.+|+.||++|. -+-++++.|++++|+|.|.-... + ..+.+.+...+..+ .-+.
T Consensus 242 ~~~~m~~~~~~adlvIs----r~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l--------~~~~ 309 (352)
T PRK12446 242 VHGELPDILAITDFVIS----RAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVL--------YEED 309 (352)
T ss_pred hhhhHHHHHHhCCEEEE----CCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEc--------chhc
Confidence 43556679999999984 24678999999999999988532 1 11233344445544 1133
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 538 VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 538 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
-+++.+.+++.+++.+ ++.+.+. .+.+.....+++..+++.
T Consensus 310 ~~~~~l~~~l~~ll~~--~~~~~~~-----~~~~~~~~aa~~i~~~i~ 350 (352)
T PRK12446 310 VTVNSLIKHVEELSHN--NEKYKTA-----LKKYNGKEAIQTIIDHIS 350 (352)
T ss_pred CCHHHHHHHHHHHHcC--HHHHHHH-----HHHcCCCCHHHHHHHHHH
Confidence 4689999999999877 4444322 234555566666655543
No 107
>PRK14986 glycogen phosphorylase; Provisional
Probab=99.19 E-value=2e-09 Score=121.41 Aligned_cols=295 Identities=17% Similarity=0.196 Sum_probs=187.9
Q ss_pred CcEEEEecCCccchHHHHHHHhhc-CCCC-------CCCceEEEEEecCcccc--cCCcccccccC-----CCc----cc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYK-PKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLN-----LPA----QF 289 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~-~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~-----l~~----~~ 289 (612)
..++||.||-|++++...+-+.+- ..|+ .....++||-|.+...+ .|+...+..+- +.. .+
T Consensus 313 ~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~~~l~~~~lpr~l~Ii~eIn~~f 392 (815)
T PRK14986 313 DKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF 392 (815)
T ss_pred cccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCCHHHHHHHccHhhhHHHHHHHHH
Confidence 355999999998876655544321 1111 13457899999876544 45554443221 111 11
Q ss_pred cccc--cccc-----CCC---CCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCc
Q 007224 290 KSSF--DFID-----GYN---KPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 359 (612)
Q Consensus 290 ~~~~--~~~~-----~~~---~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd 359 (612)
...+ .+.. +-. ..-.+...++-..++..+..+..||+-..+.+.+...... .. +-+.++.-|.|||.
T Consensus 393 l~~~~~~~~~~~~~~~~~sii~~~~~~~v~Ma~LAl~~S~~vNGVS~lH~evl~~~~f~df--~~-l~P~kf~niTNGV~ 469 (815)
T PRK14986 393 LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADF--AK-IFPGRFCNVTNGVT 469 (815)
T ss_pred HHHHHHhCCCcHHHHhhhhccccCCCCEEeeHHHHhhccchhhHHHHHHHHHHHHHHHHHH--Hh-hCCCcccccCCCCC
Confidence 1100 0000 000 0000123455566778888899999877766532110000 00 11236777999999
Q ss_pred cCccC----CCCcccccc------------------ccCc----chhhcchHHHHHH----HHHHhCCCCCCCCcEEEEE
Q 007224 360 VQEWN----PLTDKYIGV------------------KYDA----STVMDAKPLLKEA----LQAEVGLPVDRNIPVIGFI 409 (612)
Q Consensus 360 ~~~~~----p~~~~~~~~------------------~~~~----~~~~~~~~~~k~~----l~~~~gl~~~~~~~~il~i 409 (612)
...|- |.-.+-+.. -.+. ..+.+.+..+|.. ++++.|...+++...++++
T Consensus 470 ~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~d~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qa 549 (815)
T PRK14986 470 PRRWLALANPSLSAVLDEHIGRTWRTDLSQLSELKQHCDYPMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQI 549 (815)
T ss_pred hhhHhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeee
Confidence 88875 321111110 0011 1244455555554 4567799999999999999
Q ss_pred cCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCch------hHHHHHHHHHH------HCCC--ceEEEec
Q 007224 410 GRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEI------LYPE--KARGVAK 465 (612)
Q Consensus 410 Grl~~~Kg~d~-ll~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~------~~~~--~i~~~~~ 465 (612)
-|+.++|+..+ ++..+..+ ++ + +.++++.|+..+ .+-+.+-+++. ...+ ++.+...
T Consensus 550 kR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlen 629 (815)
T PRK14986 550 KRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPN 629 (815)
T ss_pred hhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCC
Confidence 99999999999 66665544 33 2 588999998543 23344444444 2233 6888888
Q ss_pred cChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEec
Q 007224 466 FNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 526 (612)
++..++..++.+||+....|+. |++|++-+-+|..|.+.+++-.|...|+.++ +.|||+||
T Consensus 630 Y~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~fG 694 (815)
T PRK14986 630 YSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFIFG 694 (815)
T ss_pred CCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEEeC
Confidence 9999999999999999999974 9999999999999999999999999999987 88999996
No 108
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.14 E-value=1.2e-07 Score=99.81 Aligned_cols=342 Identities=17% Similarity=0.147 Sum_probs=186.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCe-EEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCce
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR-VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~-V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
|+|++.... +||--.....|+++|.++|++ |.++... ...+ ..... ..++.
T Consensus 1 ~~ivl~~gG------TGGHv~pAlAl~~~l~~~g~~~v~~~~~~--~~~e-------------------~~l~~-~~~~~ 52 (357)
T COG0707 1 KKIVLTAGG------TGGHVFPALALAEELAKRGWEQVIVLGTG--DGLE-------------------AFLVK-QYGIE 52 (357)
T ss_pred CeEEEEeCC------CccchhHHHHHHHHHHhhCccEEEEeccc--ccce-------------------eeecc-ccCce
Confidence 456666543 666666777899999999996 4444222 1111 11111 12667
Q ss_pred EEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchH
Q 007224 164 RVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~ 243 (612)
++.++...+..+ . +..++.....+++...++.+.+. +++||+|+-.+.+.+. .
T Consensus 53 ~~~I~~~~~~~~---------~--------~~~~~~~~~~~~~~~~~a~~il~---------~~kPd~vig~Ggyvs~-P 105 (357)
T COG0707 53 FELIPSGGLRRK---------G--------SLKLLKAPFKLLKGVLQARKILK---------KLKPDVVIGTGGYVSG-P 105 (357)
T ss_pred EEEEeccccccc---------C--------cHHHHHHHHHHHHHHHHHHHHHH---------HcCCCEEEecCCcccc-H
Confidence 777764433222 0 11133333445555555544443 3489955555544443 3
Q ss_pred HHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
+.++... .++|++++.-|... | ..+ +...+.++.|.+
T Consensus 106 ~~~Aa~~-------~~iPv~ihEqn~~~-G--------------------------------~an---k~~~~~a~~V~~ 142 (357)
T COG0707 106 VGIAAKL-------LGIPVIIHEQNAVP-G--------------------------------LAN---KILSKFAKKVAS 142 (357)
T ss_pred HHHHHHh-------CCCCEEEEecCCCc-c--------------------------------hhH---HHhHHhhceeee
Confidence 4444433 47887776654332 1 112 223556777766
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
.-+. .. -+.+ +.++.+.-|.+..+... .+ ....+..... ++
T Consensus 143 ~f~~----~~----~~~~------~~~~~~tG~Pvr~~~~~-~~--------------------~~~~~~~~~~----~~ 183 (357)
T COG0707 143 AFPK----LE----AGVK------PENVVVTGIPVRPEFEE-LP--------------------AAEVRKDGRL----DK 183 (357)
T ss_pred cccc----cc----ccCC------CCceEEecCcccHHhhc-cc--------------------hhhhhhhccC----CC
Confidence 5554 11 1111 22567777777766554 21 1111211111 45
Q ss_pred cEEEEEcC-cccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~iGr-l~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
++|+.+|. ..-.+=-+.+.++...+.+ +++++....... ++ .+++.-.+++. .....|..+ +..+|+.||++|
T Consensus 184 ~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~-~~-~~~~~~~~~~~--~~v~~f~~d-m~~~~~~ADLvI 257 (357)
T COG0707 184 KTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND-LE-ELKSAYNELGV--VRVLPFIDD-MAALLAAADLVI 257 (357)
T ss_pred cEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch-HH-HHHHHHhhcCc--EEEeeHHhh-HHHHHHhccEEE
Confidence 67777664 4444433334444444432 677665543332 33 33333333332 344455555 456999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccceecCceEEEecccccccCCCCCCC--HHHHHHHHHHHHH
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRALA 552 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~l~~ll~ 552 (612)
. + +-++++.|..++|+|.|--..+.. ...+.+...|.++ +..+ ++.+.+.|.+++.
T Consensus 258 s--R--aGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i----------~~~~lt~~~l~~~i~~l~~ 323 (357)
T COG0707 258 S--R--AGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVI----------RQSELTPEKLAELILRLLS 323 (357)
T ss_pred e--C--CcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEe----------ccccCCHHHHHHHHHHHhc
Confidence 3 3 457999999999999998875433 2233344556665 4444 8999999999999
Q ss_pred hhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l 587 (612)
+ ++.+.+|..++. .+.-...++++.++...+
T Consensus 324 ~--~~~l~~m~~~a~--~~~~p~aa~~i~~~~~~~ 354 (357)
T COG0707 324 N--PEKLKAMAENAK--KLGKPDAAERIADLLLAL 354 (357)
T ss_pred C--HHHHHHHHHHHH--hcCCCCHHHHHHHHHHHH
Confidence 8 778888877653 344444455555554443
No 109
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=99.14 E-value=2.1e-10 Score=97.03 Aligned_cols=89 Identities=22% Similarity=0.303 Sum_probs=78.8
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 559 (612)
+.+.|++.+++++.++|+|+||+|+|+++.+++.+++.++.+++.+ + |++++.+++..++++ ++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~----------~--~~~el~~~i~~ll~~--~~~~ 66 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITY----------N--DPEELAEKIEYLLEN--PEER 66 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEE----------C--CHHHHHHHHHHHHCC--HHHH
Confidence 4678998999999999999999999999999999999999999987 3 999999999999998 6666
Q ss_pred HHHHHHH---HHhcCCcHHHHHHHHH
Q 007224 560 AEMMKNG---MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 560 ~~~~~~~---~~~~~sw~~~a~~~~~ 582 (612)
+++++++ +.++|+|+..++++++
T Consensus 67 ~~ia~~a~~~v~~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 67 RRIAKNARERVLKRHTWEHRAEQILE 92 (92)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHC
Confidence 6666665 6789999999998864
No 110
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.05 E-value=2.3e-08 Score=113.13 Aligned_cols=290 Identities=20% Similarity=0.226 Sum_probs=189.8
Q ss_pred CCcEEEEecCCccchHHHHHHHhhc-CCCC-------CCCceEEEEEecCcccc--cCCcccccccCCCccc--------
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYK-PKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQF-------- 289 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~-~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~l~~~~-------- 289 (612)
++. +||.||-|++++..-+-+.+- ..|+ .....++||.|.+...+ .|+.+.+..+ +|+.+
T Consensus 300 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~wp~~l~~~~-lpr~~~II~~In~ 377 (797)
T cd04300 300 DKV-AIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFERL-LPRHLEIIYEINR 377 (797)
T ss_pred Cce-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCccCHHHHHHH-ChHHHHHHHHHHH
Confidence 456 999999998876555443321 1111 13457899999875544 4554443322 11111
Q ss_pred --c--------------cccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEE
Q 007224 290 --K--------------SSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKG 353 (612)
Q Consensus 290 --~--------------~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~v 353 (612)
. ..+..++.. .....++-..++..+..|..||+-..+.+++...... .. +-+.++.-
T Consensus 378 ~~~~~~~~~~~~~~~~~~~l~ii~~~----~~~~v~Ma~LAi~~S~~vNGVS~lH~ei~k~~~~~df--~~-l~P~kf~n 450 (797)
T cd04300 378 RFLEEVRAKYPGDEDRIRRMSIIEEG----GEKQVRMAHLAIVGSHSVNGVAALHSELLKETVFKDF--YE-LYPEKFNN 450 (797)
T ss_pred HHHHHHHHhcCCCHHHHHhhcccccC----CCCEEehHHHHHhcCcchhhhHHHHHHHHHHhhHHHH--Hh-hCCCccCC
Confidence 0 000000100 0123566666788999999999988877665200000 00 11237788
Q ss_pred eeCCCccCccC----CCCcccccc-----------------cc--Cc---chhhcchHHHHHH----HHHHhCCCCCCCC
Q 007224 354 IVNGMDVQEWN----PLTDKYIGV-----------------KY--DA---STVMDAKPLLKEA----LQAEVGLPVDRNI 403 (612)
Q Consensus 354 I~Ngvd~~~~~----p~~~~~~~~-----------------~~--~~---~~~~~~~~~~k~~----l~~~~gl~~~~~~ 403 (612)
+.|||....|- |.-...+.. +| |+ ..+.+.|..+|+. +++..|+..+++.
T Consensus 451 ~TNGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~s 530 (797)
T cd04300 451 KTNGITPRRWLLQANPGLSALITETIGDDWVTDLDQLKKLEPFADDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDS 530 (797)
T ss_pred cCCCCCcchhhhhcCHHHHHHHHHhcCchhhhChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCc
Confidence 99999998875 211111110 01 11 2344555566655 4667899999999
Q ss_pred cEEEEEcCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCch------hHHHHHHHHHHH------CCC--c
Q 007224 404 PVIGFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEIL------YPE--K 459 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~-ll~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~~------~~~--~ 459 (612)
..++++-|+.++|+..+ ++..+.++ +. + +.++++.|+..+ ..-+.+-.++.. ..+ +
T Consensus 531 lfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lk 610 (797)
T cd04300 531 LFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLK 610 (797)
T ss_pred cEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceE
Confidence 99999999999999999 66665444 33 2 478899998543 233344444442 223 6
Q ss_pred eEEEeccChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEec
Q 007224 460 ARGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 460 i~~~~~~~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 526 (612)
+.+...++..++..++.+||+....|+. |++|+.-+-+|..|.+.|+|-.|...|+.++ ++|+|+||
T Consensus 611 VVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fiFG 681 (797)
T cd04300 611 VVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFIFG 681 (797)
T ss_pred EEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEEeC
Confidence 8888889999999999999999999874 9999999999999999999999999999987 78999996
No 111
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=99.04 E-value=1.1e-08 Score=115.07 Aligned_cols=294 Identities=15% Similarity=0.173 Sum_probs=184.7
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcC-CCC-------CCCceEEEEEecCcccc--cCCcccccccCCCccc------cc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKP-KGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPAQF------KS 291 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~-~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~l~~~~------~~ 291 (612)
.+. +||.||-|++++..-+-+.+-. .|+ .....++||.|.+...+ .|+...+..+- |+.+ ..
T Consensus 302 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~~l~~~~L-pr~~~ii~~in~ 379 (798)
T PRK14985 302 DYE-VIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDEKLVKSLL-PRHMQIIKEINT 379 (798)
T ss_pred CCc-EEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCHHHHHHHh-HHHHHHHHHHHH
Confidence 456 9999999988766554443221 111 13457899999876544 45544433221 1110 00
Q ss_pred ccc--cccCCCC---------CcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCcc
Q 007224 292 SFD--FIDGYNK---------PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDV 360 (612)
Q Consensus 292 ~~~--~~~~~~~---------~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~ 360 (612)
.|- ....+.. .......++-..++..+..|-.||+-..+.+......+.. . +-+.++.-+.|||..
T Consensus 380 ~fl~~~~~~~~~d~~~~~~~sii~~~~v~Ma~LAi~~S~~vNGVS~lH~eil~~~~f~df~--~-l~p~kf~nvTNGVt~ 456 (798)
T PRK14985 380 RFKTLVEKTWPGDKKVWAKLAVVHDKQVRMANLCVVSGFAVNGVAALHSDLVVKDLFPEYH--Q-LWPNKFHNVTNGITP 456 (798)
T ss_pred HHHHHHHHhCCCcHHHhhhhhhccCCeeehHHHHHHhcchhHhhHHHHhchhHHhhhhhhH--h-hCCCccCCcCCCcCc
Confidence 000 0000000 0001134555556777888888887766654431110000 0 113367789999999
Q ss_pred CccC----CCCcc----ccc-------------cccCc-ch----hhcchHHHHHH----HHHHhCCCCCCCCcEEEEEc
Q 007224 361 QEWN----PLTDK----YIG-------------VKYDA-ST----VMDAKPLLKEA----LQAEVGLPVDRNIPVIGFIG 410 (612)
Q Consensus 361 ~~~~----p~~~~----~~~-------------~~~~~-~~----~~~~~~~~k~~----l~~~~gl~~~~~~~~il~iG 410 (612)
..|- |.-.. +|. .+|.. .. +.+.|..+|.. ++++.|...+++...++++-
T Consensus 457 rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~k 536 (798)
T PRK14985 457 RRWIKQCNPALAALLDKTLKKEWANDLDQLINLEKYADDAAFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIK 536 (798)
T ss_pred chhhhhhCHHHHHHHHHhcCcchhhChHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHh
Confidence 8884 32111 111 11222 22 24444555544 46777999999989999999
Q ss_pred CcccccCHHH-HHHHHHhccc----C-----CcEEEEEeCCch------hHHHHHHHHHHHC------CC--ceEEEecc
Q 007224 411 RLEEQKGSDI-LAAAIPHFIK----E-----NVQIIVLGTGKK------PMEKQLEQLEILY------PE--KARGVAKF 466 (612)
Q Consensus 411 rl~~~Kg~d~-ll~a~~~l~~----~-----~~~lvivG~g~~------~~~~~l~~l~~~~------~~--~i~~~~~~ 466 (612)
|+.++|+..+ ++..+..+.+ + +.++++.|+..+ .+-+.+-.++... .+ ++.+...+
T Consensus 537 R~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY 616 (798)
T PRK14985 537 RLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDY 616 (798)
T ss_pred hhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCC
Confidence 9999999999 7666554432 2 478999998643 2233344444322 22 68888889
Q ss_pred ChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEec
Q 007224 467 NIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 526 (612)
+..++..++.+||+....|+. |++|+.-+-+|..|.+.|+|-.|...|+.++ +.|||+||
T Consensus 617 ~VslAe~lipaaDvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~fG 680 (798)
T PRK14985 617 CVSAAELLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFIFG 680 (798)
T ss_pred ChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEEeC
Confidence 999999999999999999874 9999999999999999999999999999886 78999996
No 112
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=99.02 E-value=9.7e-09 Score=111.09 Aligned_cols=171 Identities=8% Similarity=0.010 Sum_probs=128.7
Q ss_pred HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHh
Q 007224 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEV 395 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~ 395 (612)
...|.||+.++...+.+.++... ..++.+||-|+=.. +...
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~---------~~~~~~ip~g~i~~-~~~~----------------------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDN---------EYQEQISQLGYLYP-FKKD----------------------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCc---------ccCceEEEEEEEEe-eccc-----------------------------
Confidence 57789999998877777753211 11456666555311 1100
Q ss_pred CCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007224 396 GLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 396 gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~ 473 (612)
++...-++.++. +..+++++++.+ |+++|.| |.+.+ +...|.++ .+++ ++.....+....+.+
T Consensus 279 ----~r~~~~~l~~t~-------s~~I~~i~~Lv~~lPd~~f~I-ga~te-~s~kL~~L-~~y~-nvvly~~~~~~~l~~ 343 (438)
T TIGR02919 279 ----NKYRKQALILTN-------SDQIEHLEEIVQALPDYHFHI-AALTE-MSSKLMSL-DKYD-NVKLYPNITTQKIQE 343 (438)
T ss_pred ----cCCcccEEEECC-------HHHHHHHHHHHHhCCCcEEEE-EecCc-ccHHHHHH-HhcC-CcEEECCcChHHHHH
Confidence 112245666662 888999998865 8999999 76653 46788888 6774 466677777766778
Q ss_pred HHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
++..||+++-+|..|++++++.||+..|+|+|+.+. -|..+++.+ |.++ +.+|+++|+++|..++.
T Consensus 344 ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l~----------~~~~~~~m~~~i~~lL~ 410 (438)
T TIGR02919 344 LYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENIF----------EHNEVDQLISKLKDLLN 410 (438)
T ss_pred HHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Ccee----------cCCCHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999984 455677766 6776 89999999999999999
Q ss_pred h
Q 007224 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 411 d 411 (438)
T TIGR02919 411 D 411 (438)
T ss_pred C
Confidence 8
No 113
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=98.96 E-value=3.8e-08 Score=110.99 Aligned_cols=292 Identities=20% Similarity=0.218 Sum_probs=189.1
Q ss_pred CCcEEEEecCCccchHHHHHHHhhc-CCCC-------CCCceEEEEEecCcccc--cCCccccccc---------CCCcc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYK-PKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLL---------NLPAQ 288 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~-~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~---------~l~~~ 288 (612)
.+. +||.||-|++++..-+-+.+- ..|+ .....++||-|.+.+.+ .|+.+.+..+ ++...
T Consensus 297 ~~~-~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~wp~~l~~~~Lpr~~~iI~~In~~ 375 (794)
T TIGR02093 297 KKV-AIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEKWPVDLFQKLLPRHLEIIYEINRR 375 (794)
T ss_pred cce-EEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCCcCHHHHHHHHhHHHHHHHHHhHH
Confidence 455 999999998876655443321 1111 13457899999875544 4555444321 11111
Q ss_pred cccccc--cccCC--------CCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccc---cCCccchhhhhccCeEEee
Q 007224 289 FKSSFD--FIDGY--------NKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE---DKGVELDNIIRKTGIKGIV 355 (612)
Q Consensus 289 ~~~~~~--~~~~~--------~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~---~~g~~~~~~~~~~~i~vI~ 355 (612)
+..... +.... ...-..+..++-..++..+..|..||+-..+.+.+.. .+.+ -+.++.-+.
T Consensus 376 fl~~~~~~~p~d~~~~~~~sii~~~~~~~v~Ma~LAi~~S~~vNGVS~lH~eilk~~~~~df~~l------~P~kf~n~T 449 (794)
T TIGR02093 376 FLAELAAKGPGDEAKIRRMSIIEEGQSKRVRMANLAIVGSHSVNGVAALHTELLKEDLLKDFYEL------YPEKFNNKT 449 (794)
T ss_pred HHHHHHHhCCCcHHHHhheeeeecCCCCEEehHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHhh------CCCccCCcC
Confidence 111000 00000 0000012456666778889999999998887766310 0111 123677899
Q ss_pred CCCccCccCCCCcc----cccc-----------------cc-Cc----chhhcchHHHHHH----HHHHhCCCCCCCCcE
Q 007224 356 NGMDVQEWNPLTDK----YIGV-----------------KY-DA----STVMDAKPLLKEA----LQAEVGLPVDRNIPV 405 (612)
Q Consensus 356 Ngvd~~~~~p~~~~----~~~~-----------------~~-~~----~~~~~~~~~~k~~----l~~~~gl~~~~~~~~ 405 (612)
|||....|--...+ -+.. +| +. ..+.+.|..+|.. ++++.|...+++...
T Consensus 450 NGVt~rrWl~~~np~L~~Li~~~ig~~W~~d~~~l~~l~~~~~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slf 529 (794)
T TIGR02093 450 NGITPRRWLRLANPGLSALLTETIGDDWLTDLDLLKKLEPYADDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIF 529 (794)
T ss_pred CCCCccchhhhcCHHHHHHHHHhcCchhhhcHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccc
Confidence 99999887521111 1111 12 11 3344555555555 456789988999999
Q ss_pred EEEEcCcccccCHHH-HHHHHHhc---cc-C-----CcEEEEEeCCch------hHHHHHHHHHHH------CCC--ceE
Q 007224 406 IGFIGRLEEQKGSDI-LAAAIPHF---IK-E-----NVQIIVLGTGKK------PMEKQLEQLEIL------YPE--KAR 461 (612)
Q Consensus 406 il~iGrl~~~Kg~d~-ll~a~~~l---~~-~-----~~~lvivG~g~~------~~~~~l~~l~~~------~~~--~i~ 461 (612)
++++-|+.++|+..+ ++..+..+ ++ + +.++++.|+..+ .+-+.+-.++.. ..+ ++.
T Consensus 530 dvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVV 609 (794)
T TIGR02093 530 DVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVV 609 (794)
T ss_pred hhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEE
Confidence 999999999999999 66665544 33 2 568999998543 233334444432 223 688
Q ss_pred EEeccChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEec
Q 007224 462 GVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 462 ~~~~~~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 526 (612)
+...++..++..++.+||+....|+. |++|+.-+-+|..|.+.|+|-.|...|+.++ ++|+|+||
T Consensus 610 FlenY~VslAe~iipaaDvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fiFG 678 (794)
T TIGR02093 610 FVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFIFG 678 (794)
T ss_pred EeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEEcC
Confidence 88889999999999999999999874 9999999999999999999999999999987 88999996
No 114
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=98.88 E-value=2.1e-09 Score=110.55 Aligned_cols=320 Identities=18% Similarity=0.238 Sum_probs=175.6
Q ss_pred CcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCc-ccccccCCCcccccccccccCCCCCcCCcc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAF-EDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+-||-|.|+|..+..-++.+... ..+..+||.|.... ||+-. ...+..+ ..++|+-...-.+.-.-..
T Consensus 174 ~~vVahFHEW~AGVgL~l~R~rr------l~iaTifTTHATLL-GRyLCA~~~DfYN----nLd~f~vD~EAGkr~IYHr 242 (692)
T KOG3742|consen 174 TAVVAHFHEWQAGVGLILCRARR------LDIATIFTTHATLL-GRYLCAGNVDFYN----NLDSFDVDKEAGKRQIYHR 242 (692)
T ss_pred hHHHHHHHHHHhccchheehhcc------cceEEEeehhHHHH-HHHHhcccchhhh----chhhcccchhhccchhHHH
Confidence 45577899999887555554432 57888999997543 44311 0111111 0111111111111100012
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
+-+++.+...|+...|||+-.+-+-. -+++++.-.+.|||+++..|...-. .. --.+..
T Consensus 243 YC~ERaa~h~AhVFTTVSeITa~EAe----------HlLkRKPD~itPNGLNV~KFsA~HE---FQ--------NLHA~~ 301 (692)
T KOG3742|consen 243 YCLERAAAHTAHVFTTVSEITALEAE----------HLLKRKPDVITPNGLNVKKFSAVHE---FQ--------NLHAQK 301 (692)
T ss_pred HHHHHHhhhhhhhhhhHHHHHHHHHH----------HHHhcCCCeeCCCCcceeehhHHHH---HH--------HHHHHH
Confidence 34567777788999999986544322 2333445567899999988754210 00 012333
Q ss_pred HHHHHHHh-----C-CCCC-CCCcEEEEEcCcc-cccCHHHHHHHHHhccc------CC---cEEEEEeCC-c-------
Q 007224 388 KEALQAEV-----G-LPVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK------EN---VQIIVLGTG-K------- 442 (612)
Q Consensus 388 k~~l~~~~-----g-l~~~-~~~~~il~iGrl~-~~Kg~d~ll~a~~~l~~------~~---~~lvivG~g-~------- 442 (612)
|+.+++-+ | +.-| ++..++...||.+ ..||-|+++|++.+|.. .+ +-|+|.-.. +
T Consensus 302 KekIndFVRGHF~GhlDFdLdkTlyfFiAGRYEf~NKGaDmFiEsLaRLN~~Lk~~~s~~TVVaFlImPaktN~FnVesL 381 (692)
T KOG3742|consen 302 KEKINDFVRGHFHGHLDFDLDKTLYFFIAGRYEFSNKGADMFIESLARLNYLLKVSGSPKTVVAFLIMPAKTNSFNVESL 381 (692)
T ss_pred HHHHHHHhhhhccccccccccceEEEEEeeeeeeccCchHHHHHHHHHhHHHHeecCCCceEEEEEEeecCCCccchhhh
Confidence 44444332 1 1111 1334556679998 69999999999999843 11 223333221 0
Q ss_pred --hhHHHHHHH---------------------------------------HH----H-HCC-------------------
Q 007224 443 --KPMEKQLEQ---------------------------------------LE----I-LYP------------------- 457 (612)
Q Consensus 443 --~~~~~~l~~---------------------------------------l~----~-~~~------------------- 457 (612)
....+++.. .. . .+|
T Consensus 382 kgqAv~kqL~dtv~~Vk~~~Gkrifd~~l~g~lPd~~ell~~~d~v~lKr~i~a~~r~slPPv~THNm~dDa~DpiL~~i 461 (692)
T KOG3742|consen 382 KGQAVRKQLWDTVNEVKEKVGKRIFDHCLRGELPDLDELLDKDDLVLLKRCIFALQRQSLPPVCTHNMIDDANDPILSSI 461 (692)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCChHHhhChhHHHHHHHHHHHhccCCCCCceeccccccccchHHHHh
Confidence 000111100 00 0 000
Q ss_pred ------------CceEEEecc---ChH----HHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc----c
Q 007224 458 ------------EKARGVAKF---NIP----LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV----D 514 (612)
Q Consensus 458 ------------~~i~~~~~~---~~~----~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~----e 514 (612)
.+++++..| +.+ ...++.++|.+.|+||.+||+|.+..|.-.+|+|-|+|+..|.. |
T Consensus 462 Rr~~LFN~~~DRVKvifHPEFLss~sPllglDYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMee 541 (692)
T KOG3742|consen 462 RRIGLFNSPSDRVKVIFHPEFLSSTSPLLGLDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEE 541 (692)
T ss_pred HhhhcccCcccceEEEecHHHhccCCCCcCCCHHHHhccccccccccccCCCCCCchheEEeccccccccccchhhhHHH
Confidence 112222222 011 12358899999999999999999999999999999999987754 4
Q ss_pred ceecC-ceEEEe--cccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH----HHHhcCCcHHHHHHHHHHHHHH
Q 007224 515 TVEEG-FTGFQM--GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN----GMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 515 ~v~~g-~~G~l~--~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~----~~~~~~sw~~~a~~~~~~y~~l 587 (612)
.|.+. .-|+.+ +.|.. ...++++|++-|...... .+++++.++ .+..-.+|+.+..-|.+.=.-.
T Consensus 542 hi~d~~ayGIYIvDRRfks-----~deSv~qL~~~m~~F~~q---sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~aR~la 613 (692)
T KOG3742|consen 542 HIEDPQAYGIYIVDRRFKS-----PDESVQQLASFMYEFCKQ---SRRQRIIQRNRTERLSDLLDWKYLGRYYRKARHLA 613 (692)
T ss_pred HhcCchhceEEEEecccCC-----hhhHHHHHHHHHHHHHHH---HHHHHHHHhcchhhHHHHHhHHHHhHHHHHHHHHH
Confidence 44432 335544 22211 234567777777777664 233333332 2567789999998887765443
Q ss_pred H
Q 007224 588 E 588 (612)
Q Consensus 588 ~ 588 (612)
+
T Consensus 614 L 614 (692)
T KOG3742|consen 614 L 614 (692)
T ss_pred H
Confidence 3
No 115
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=98.82 E-value=4.1e-07 Score=101.70 Aligned_cols=293 Identities=18% Similarity=0.239 Sum_probs=164.1
Q ss_pred cEEEEecCCccchHHHHHHHhh-cCCCC-------CCCceEEEEEecCcccc--cCCcccccccCCCc----------cc
Q 007224 230 DVVFVANDWHTSLIPCYLKTMY-KPKGM-------YKSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------QF 289 (612)
Q Consensus 230 Dvvih~h~~~~~~~~~~l~~~~-~~~~~-------~~~~~vv~~iH~~~~~~--~~~~~~~~~~~l~~----------~~ 289 (612)
-++||.||-|++++..-+-+.+ ...|+ ....-.+||.|.+.+.+ +|+...+..+ +|+ .+
T Consensus 215 ~~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp~~l~~~~-Lpr~~~ii~ein~~f 293 (713)
T PF00343_consen 215 KVVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWPVDLFERY-LPRHLEIIYEINRRF 293 (713)
T ss_dssp HEEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEEHHHHHHH-SHHHHHHHHHHHHHH
T ss_pred ceEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccCHHHHHHH-ChHHHHHHHHHhHHH
Confidence 3599999999887665544433 22332 12346899999876655 4554443321 111 11
Q ss_pred ccccc--ccc--------CCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCc
Q 007224 290 KSSFD--FID--------GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 359 (612)
Q Consensus 290 ~~~~~--~~~--------~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd 359 (612)
...+. +.. +....-.....++-..++..+..+-.||+-..+.+.+...... .. +-+.++.-|.|||.
T Consensus 294 ~~~~~~~~~~d~~~~~~l~ii~~~~~~~~~Ma~LAl~~S~~vNGVS~LH~ev~k~~~f~~f--~~-l~P~kf~nvTNGVh 370 (713)
T PF00343_consen 294 LDELRRKYPGDEDQIRRLSIIEEGNSKRFRMANLALRGSHSVNGVSKLHGEVLKQMVFKDF--YE-LWPEKFGNVTNGVH 370 (713)
T ss_dssp HHHHHHHSTT-HHHHHHHSSEETSSSCEEEHHHHHHHCESEEEESSHHHHHHHHHTTTHHH--HH-HSGGGEEE----B-
T ss_pred HHHHHHHhcCcchhhhhcccccccchhhcchhHHHHHhcccccchHHHHHHHHHHHHhhhh--hh-cCCceeeccccCcc
Confidence 10000 000 0000011235677777899999999999988877654211111 01 12347999999999
Q ss_pred cCccCCCCc--------ccccccc--Ccch----------------hhcchHHHH----HHHHHHhCCCCCCCCcEEEEE
Q 007224 360 VQEWNPLTD--------KYIGVKY--DAST----------------VMDAKPLLK----EALQAEVGLPVDRNIPVIGFI 409 (612)
Q Consensus 360 ~~~~~p~~~--------~~~~~~~--~~~~----------------~~~~~~~~k----~~l~~~~gl~~~~~~~~il~i 409 (612)
+..|--... +++...+ +++. +.+.|...| +.++++.|...+++...++++
T Consensus 371 ~rrWl~~~nP~L~~L~~~~iG~~W~~d~~~l~~l~~~~dd~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~ 450 (713)
T PF00343_consen 371 PRRWLSQANPELSELITEYIGDDWRTDLEQLEKLEKFADDEEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQA 450 (713)
T ss_dssp TCCCCCCTSHHHHHHHHHHHTSGGGCSGGGGGGGGGGCCSHHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEE
T ss_pred CcccccccCHHHHHHHHHHhccccccCHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhh
Confidence 988843210 1111000 1111 112222223 335667788778888899999
Q ss_pred cCcccccCHHH-HH---HHHHhccc------CCcEEEEEeCCchh------HHHHHHHHHHH------CCC--ceEEEec
Q 007224 410 GRLEEQKGSDI-LA---AAIPHFIK------ENVQIIVLGTGKKP------MEKQLEQLEIL------YPE--KARGVAK 465 (612)
Q Consensus 410 Grl~~~Kg~d~-ll---~a~~~l~~------~~~~lvivG~g~~~------~~~~l~~l~~~------~~~--~i~~~~~ 465 (612)
-|+.++|+..+ ++ +-+.++++ .++++++.|+..+. +-+.+.+++.. ..+ +|.++..
T Consensus 451 rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlen 530 (713)
T PF00343_consen 451 RRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLEN 530 (713)
T ss_dssp S-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT
T ss_pred hhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecC
Confidence 99999999888 33 44444443 26889999996532 22333333321 122 5788888
Q ss_pred cChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEec
Q 007224 466 FNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMG 526 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~ 526 (612)
++..++..++.++|+.+..|+. |++|++-+-+|..|.+.+++-.|...|+.++ ..+.|+||
T Consensus 531 YdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fiFG 595 (713)
T PF00343_consen 531 YDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFIFG 595 (713)
T ss_dssp -SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEEES
T ss_pred CcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEEcC
Confidence 9999999999999999999975 9999999999999999999999999998764 46889996
No 116
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=98.79 E-value=2.1e-07 Score=88.32 Aligned_cols=181 Identities=18% Similarity=0.215 Sum_probs=112.1
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|++--.| ...||.++.+.+|+..|+++||+|+|.|..... +.. ....+|++++
T Consensus 3 kIaIiGtrGIP-a~YGGfET~ve~L~~~l~~~g~~v~Vyc~~~~~-~~~---------------------~~~y~gv~l~ 59 (185)
T PF09314_consen 3 KIAIIGTRGIP-ARYGGFETFVEELAPRLVSKGIDVTVYCRSDYY-PYK---------------------EFEYNGVRLV 59 (185)
T ss_pred eEEEEeCCCCC-cccCcHHHHHHHHHHHHhcCCceEEEEEccCCC-CCC---------------------CcccCCeEEE
Confidence 69999988667 479999999999999999999999999986321 110 1223678888
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc-cchHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH-TSLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~-~~~~~ 244 (612)
.++.|..- ....+..-..++..++.....+ +.+.| |++.+... .+++.
T Consensus 60 ~i~~~~~g-----------------------~~~si~yd~~sl~~al~~~~~~-------~~~~~-ii~ilg~~~g~~~~ 108 (185)
T PF09314_consen 60 YIPAPKNG-----------------------SAESIIYDFLSLLHALRFIKQD-------KIKYD-IILILGYGIGPFFL 108 (185)
T ss_pred EeCCCCCC-----------------------chHHHHHHHHHHHHHHHHHhhc-------cccCC-EEEEEcCCccHHHH
Confidence 77544210 0111222223333433221100 12478 78888766 34444
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcch-hHHHHHHHhcCEEEe
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKI-NWMKAGILESDMVLT 323 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~k~~~~~ad~vi~ 323 (612)
.+++.+.+ .+.|+++.+|++++... .++.+ .++.+ .-++.+.+.||.+|+
T Consensus 109 ~~~r~~~~-----~g~~v~vN~DGlEWkR~-------KW~~~-----------------~k~~lk~~E~~avk~ad~lIa 159 (185)
T PF09314_consen 109 PFLRKLRK-----KGGKVVVNMDGLEWKRA-------KWGRP-----------------AKKYLKFSEKLAVKYADRLIA 159 (185)
T ss_pred HHHHhhhh-----cCCcEEECCCcchhhhh-------hcCHH-----------------HHHHHHHHHHHHHHhCCEEEE
Confidence 44444321 36799999998775221 00100 01111 233556789999999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCc
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMD 359 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd 359 (612)
.|+..++.+.+. |+- .+..+|++|.|
T Consensus 160 Ds~~I~~y~~~~--y~~--------~~s~~IaYGad 185 (185)
T PF09314_consen 160 DSKGIQDYIKER--YGR--------KKSTFIAYGAD 185 (185)
T ss_pred cCHHHHHHHHHH--cCC--------CCcEEecCCCC
Confidence 999999999963 441 26788999986
No 117
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.67 E-value=7.1e-06 Score=87.50 Aligned_cols=214 Identities=14% Similarity=0.150 Sum_probs=127.0
Q ss_pred HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeC-CCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 316 LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN-GMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N-gvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
+.|+..++.++..++.+.+ .|++.. ++.++-| ++|.-.+.... .++.+.++
T Consensus 143 ~la~l~f~~t~~~~~~L~~---eg~~~~------~i~~tG~~~iD~l~~~~~~-------------------~~~~~~~~ 194 (365)
T TIGR03568 143 KLSHLHFVATEEYRQRVIQ---MGEDPD------RVFNVGSPGLDNILSLDLL-------------------SKEELEEK 194 (365)
T ss_pred HHHhhccCCCHHHHHHHHH---cCCCCC------cEEEECCcHHHHHHhhhcc-------------------CHHHHHHH
Confidence 3568888899999998876 566544 6766655 45543221110 14567778
Q ss_pred hCCCCCCCCcEEEEEcCcc--cc---cCHHHHHHHHHhcccCCcEEEEE-e-CCchhHHHHHHHHHHHCCCceEEEeccC
Q 007224 395 VGLPVDRNIPVIGFIGRLE--EQ---KGSDILAAAIPHFIKENVQIIVL-G-TGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~--~~---Kg~d~ll~a~~~l~~~~~~lviv-G-~g~~~~~~~l~~l~~~~~~~i~~~~~~~ 467 (612)
+|++.+. ..+++.+-+-+ .. +.+..+++++.++ ..++.++.- + .+.+...+.++++..+ ..++.......
T Consensus 195 lgl~~~~-~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~-~~~~~vi~P~~~p~~~~i~~~i~~~~~~-~~~v~l~~~l~ 271 (365)
T TIGR03568 195 LGIDLDK-PYALVTFHPVTLEKESAEEQIKELLKALDEL-NKNYIFTYPNADAGSRIINEAIEEYVNE-HPNFRLFKSLG 271 (365)
T ss_pred hCCCCCC-CEEEEEeCCCcccccCchHHHHHHHHHHHHh-ccCCEEEEeCCCCCchHHHHHHHHHhcC-CCCEEEECCCC
Confidence 8885322 23334444432 22 3344555555444 124422221 2 1223345556665322 23477777677
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
......+++.|+++|--| .|.. .||.++|+|+|+ .+.-.|.+..|.+.+++ ..|++++.+++
T Consensus 272 ~~~~l~Ll~~a~~vitdS----Sggi-~EA~~lg~Pvv~--l~~R~e~~~~g~nvl~v-----------g~~~~~I~~a~ 333 (365)
T TIGR03568 272 QERYLSLLKNADAVIGNS----SSGI-IEAPSFGVPTIN--IGTRQKGRLRADSVIDV-----------DPDKEEIVKAI 333 (365)
T ss_pred hHHHHHHHHhCCEEEEcC----hhHH-HhhhhcCCCEEe--ecCCchhhhhcCeEEEe-----------CCCHHHHHHHH
Confidence 777778999999999433 2333 899999999995 45677888778788764 46899999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHH
Q 007224 548 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 548 ~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~ 583 (612)
.++++ ...+..+ ......|.....+++..++
T Consensus 334 ~~~~~---~~~~~~~--~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 334 EKLLD---PAFKKSL--KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred HHHhC---hHHHHHH--hhCCCCCCCChHHHHHHHh
Confidence 99543 2222222 1123457666666776654
No 118
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=98.66 E-value=5.5e-06 Score=86.46 Aligned_cols=296 Identities=17% Similarity=0.167 Sum_probs=165.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++=... +| .-.....+...|.++||+|.+.+..+++..+-.+ .-|++.
T Consensus 1 MkIwiDi~~-p~------hvhfFk~~I~eL~~~GheV~it~R~~~~~~~LL~----------------------~yg~~y 51 (335)
T PF04007_consen 1 MKIWIDITH-PA------HVHFFKNIIRELEKRGHEVLITARDKDETEELLD----------------------LYGIDY 51 (335)
T ss_pred CeEEEECCC-ch------HHHHHHHHHHHHHhCCCEEEEEEeccchHHHHHH----------------------HcCCCe
Confidence 888887654 23 2457778999999999999999988765444211 124555
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
..+.. .+..++ .+......+..++.+... +++|| |+.++....+.
T Consensus 52 ~~iG~-----------~g~~~~------------~Kl~~~~~R~~~l~~~~~---------~~~pD-v~is~~s~~a~-- 96 (335)
T PF04007_consen 52 IVIGK-----------HGDSLY------------GKLLESIERQYKLLKLIK---------KFKPD-VAISFGSPEAA-- 96 (335)
T ss_pred EEEcC-----------CCCCHH------------HHHHHHHHHHHHHHHHHH---------hhCCC-EEEecCcHHHH--
Confidence 44421 111111 223333444444444432 34799 55554322221
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
...+ . .++|.+....+... . ...+..+..||.++++
T Consensus 97 ~va~-~-------lgiP~I~f~D~e~a-~-----------------------------------~~~~Lt~Pla~~i~~P 132 (335)
T PF04007_consen 97 RVAF-G-------LGIPSIVFNDTEHA-I-----------------------------------AQNRLTLPLADVIITP 132 (335)
T ss_pred HHHH-H-------hCCCeEEEecCchh-h-----------------------------------ccceeehhcCCeeECC
Confidence 1111 1 47888887764110 0 0001124478999988
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEe-eCCCccCcc----CCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGI-VNGMDVQEW----NPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI-~Ngvd~~~~----~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
+-.-...+.. +|.. + .+. +||++.-.| .| ...+.+++|++
T Consensus 133 ~~~~~~~~~~---~G~~-~--------~i~~y~G~~E~ayl~~F~P----------------------d~~vl~~lg~~- 177 (335)
T PF04007_consen 133 EAIPKEFLKR---FGAK-N--------QIRTYNGYKELAYLHPFKP----------------------DPEVLKELGLD- 177 (335)
T ss_pred cccCHHHHHh---cCCc-C--------CEEEECCeeeEEeecCCCC----------------------ChhHHHHcCCC-
Confidence 8765555553 5543 2 234 677765433 33 24567888965
Q ss_pred CCCCcEEEEEcCcccccC------HHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007224 400 DRNIPVIGFIGRLEEQKG------SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg------~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~ 473 (612)
+.++|+. |.++.+. -+.+-+.++++.+..-.++++-...+. +++.++++ +.... ..-..+.
T Consensus 178 --~~~yIvv--R~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~-----~~~~~~~~--~~i~~--~~vd~~~ 244 (335)
T PF04007_consen 178 --DEPYIVV--RPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQ-----RELFEKYG--VIIPP--EPVDGLD 244 (335)
T ss_pred --CCCEEEE--EeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcch-----hhHHhccC--ccccC--CCCCHHH
Confidence 2355553 5554332 233456666665533336666554321 22333333 11110 1112336
Q ss_pred HHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC---CcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
++..||++| -+-|....||...|+|.|.+..| ++.+.+.+ .|+++ ...|++++.+.+...
T Consensus 245 Ll~~a~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~~--~Gll~----------~~~~~~ei~~~v~~~ 307 (335)
T PF04007_consen 245 LLYYADLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLIE--KGLLY----------HSTDPDEIVEYVRKN 307 (335)
T ss_pred HHHhcCEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHHH--CCCeE----------ecCCHHHHHHHHHHh
Confidence 999999999 35678899999999999998654 33344433 36766 778999998877665
Q ss_pred HHh
Q 007224 551 LAT 553 (612)
Q Consensus 551 l~~ 553 (612)
...
T Consensus 308 ~~~ 310 (335)
T PF04007_consen 308 LGK 310 (335)
T ss_pred hhc
Confidence 543
No 119
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=98.58 E-value=4.9e-06 Score=86.83 Aligned_cols=119 Identities=19% Similarity=0.258 Sum_probs=80.7
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
...+++++|..... .++++++++ ++.+++++|..... ....++. ...+..+...++++.||++
T Consensus 192 ~~~iLv~~gg~~~~----~~~~~l~~~--~~~~~~v~g~~~~~----------~~~~ni~-~~~~~~~~~~~~m~~ad~v 254 (318)
T PF13528_consen 192 EPKILVYFGGGGPG----DLIEALKAL--PDYQFIVFGPNAAD----------PRPGNIH-VRPFSTPDFAELMAAADLV 254 (318)
T ss_pred CCEEEEEeCCCcHH----HHHHHHHhC--CCCeEEEEcCCccc----------ccCCCEE-EeecChHHHHHHHHhCCEE
Confidence 44689999987665 667888887 57899999776311 0133354 4456656677899999999
Q ss_pred EeCCCCCCCcHH-HHHHHHcCCceEEcCCCCcccce------ecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 482 LIPSRFEPCGLI-QLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 482 l~pS~~E~~gl~-~lEAma~G~PvI~s~~gg~~e~v------~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
|.- .|.. +.||+++|+|+|+-...+..|.. ++-+.|..+ -.+..+++.+.+.|+++
T Consensus 255 Is~-----~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~--------~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 255 ISK-----GGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL--------SQEDLTPERLAEFLERL 317 (318)
T ss_pred EEC-----CCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc--------ccccCCHHHHHHHHhcC
Confidence 942 5555 99999999999999876655432 233445443 01244678888877653
No 120
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=98.55 E-value=2.9e-05 Score=83.75 Aligned_cols=124 Identities=19% Similarity=0.183 Sum_probs=79.2
Q ss_pred CCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEE-EEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007224 402 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 402 ~~~~il~iGrl~~---~Kg~d~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ 477 (612)
+.++++..|.... .+-...+++++..+ +.+++ .+|..... . ...+.++......+. ..++..
T Consensus 239 ~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~---~~~~i~~~g~~~~~--~------~~~~~~v~~~~~~p~---~~ll~~ 304 (401)
T cd03784 239 RPPVYVGFGSMVVRDPEALARLDVEAVATL---GQRAILSLGWGGLG--A------EDLPDNVRVVDFVPH---DWLLPR 304 (401)
T ss_pred CCcEEEeCCCCcccCHHHHHHHHHHHHHHc---CCeEEEEccCcccc--c------cCCCCceEEeCCCCH---HHHhhh
Confidence 3357777888753 34555666666655 55644 45543311 1 233445654444332 247999
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll 551 (612)
||++|. -+-..++.||+++|+|+|+....+ ..+.+.+.+.|..+ +.. +.+++.+++++++
T Consensus 305 ~d~~I~----hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l----------~~~~~~~~~l~~al~~~l 370 (401)
T cd03784 305 CAAVVH----HGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPAL----------DPRELTAERLAAALRRLL 370 (401)
T ss_pred hheeee----cCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCC----------CcccCCHHHHHHHHHHHh
Confidence 999993 334588999999999999997654 23344445566654 333 7899999999999
Q ss_pred Hh
Q 007224 552 AT 553 (612)
Q Consensus 552 ~~ 553 (612)
++
T Consensus 371 ~~ 372 (401)
T cd03784 371 DP 372 (401)
T ss_pred CH
Confidence 85
No 121
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.48 E-value=3.1e-05 Score=81.91 Aligned_cols=269 Identities=16% Similarity=0.139 Sum_probs=145.6
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+||+|+..-|-.+.+..++.... .++| |.++|.-...+-. ..+. .
T Consensus 67 ~Pd~Vlv~GD~~~~la~alaA~~-------~~ip-v~HieaGlRs~d~------~~g~---------------------~ 111 (346)
T PF02350_consen 67 KPDAVLVLGDRNEALAAALAAFY-------LNIP-VAHIEAGLRSGDR------TEGM---------------------P 111 (346)
T ss_dssp T-SEEEEETTSHHHHHHHHHHHH-------TT-E-EEEES-----S-T------TSST---------------------T
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-------hCCC-EEEecCCCCcccc------CCCC---------------------c
Confidence 69966555566666666665554 5889 5666642100000 0011 1
Q ss_pred hhHHHHHHH-hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCC-CccCccCCCCccccccccCcchhhcchH
Q 007224 308 INWMKAGIL-ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 308 ~~~~k~~~~-~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
-...|..+. .|+.-++.++..++.+.+ .|++++ +|.++-|- +|.-...
T Consensus 112 de~~R~~i~~la~lhf~~t~~~~~~L~~---~G~~~~------rI~~vG~~~~D~l~~~--------------------- 161 (346)
T PF02350_consen 112 DEINRHAIDKLAHLHFAPTEEARERLLQ---EGEPPE------RIFVVGNPGIDALLQN--------------------- 161 (346)
T ss_dssp HHHHHHHHHHH-SEEEESSHHHHHHHHH---TT--GG------GEEE---HHHHHHHHH---------------------
T ss_pred hhhhhhhhhhhhhhhccCCHHHHHHHHh---cCCCCC------eEEEEChHHHHHHHHh---------------------
Confidence 233444444 789999999999999997 788766 78877763 3321110
Q ss_pred HHHHHHHHHh---CCCCCCCCcEEEE-EcCccc---ccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCC
Q 007224 386 LLKEALQAEV---GLPVDRNIPVIGF-IGRLEE---QKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP 457 (612)
Q Consensus 386 ~~k~~l~~~~---gl~~~~~~~~il~-iGrl~~---~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~ 457 (612)
+....+++ ++..+...++++. .=|.+. ......+.+++..+.+ +++++++.....+.....+.+...++
T Consensus 162 --~~~~~~~~~~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~- 238 (346)
T PF02350_consen 162 --KEEIEEKYKNSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY- 238 (346)
T ss_dssp --HHTTCC-HHHHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--
T ss_pred --HHHHhhhhhhHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-
Confidence 11110000 1100012344444 434332 3445677777777766 58999999987666777777766666
Q ss_pred CceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCC
Q 007224 458 EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 458 ~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~ 536 (612)
.++.............+++.|+++|- ..|.++-||..+|+|+|.-.. |--.+.+..+.+-+ + .
T Consensus 239 ~~v~~~~~l~~~~~l~ll~~a~~vvg-----dSsGI~eEa~~lg~P~v~iR~~geRqe~r~~~~nvl-v----------~ 302 (346)
T PF02350_consen 239 DNVRLIEPLGYEEYLSLLKNADLVVG-----DSSGIQEEAPSLGKPVVNIRDSGERQEGRERGSNVL-V----------G 302 (346)
T ss_dssp TTEEEE----HHHHHHHHHHESEEEE-----SSHHHHHHGGGGT--EEECSSS-S-HHHHHTTSEEE-E----------T
T ss_pred CCEEEECCCCHHHHHHHHhcceEEEE-----cCccHHHHHHHhCCeEEEecCCCCCHHHHhhcceEE-e----------C
Confidence 36777777777777789999999984 346445599999999999954 44556666565545 5 3
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 537 PVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
.|.+++.+++.+++.+ ...+.++.. ....|.-...+++..++++
T Consensus 303 -~~~~~I~~ai~~~l~~--~~~~~~~~~--~~npYgdG~as~rI~~~Lk 346 (346)
T PF02350_consen 303 -TDPEAIIQAIEKALSD--KDFYRKLKN--RPNPYGDGNASERIVEILK 346 (346)
T ss_dssp -SSHHHHHHHHHHHHH---HHHHHHHHC--S--TT-SS-HHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhC--hHHHHhhcc--CCCCCCCCcHHHHHHHhhC
Confidence 7999999999999986 334333321 1245666666777766653
No 122
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=98.44 E-value=3.1e-05 Score=80.48 Aligned_cols=193 Identities=15% Similarity=0.064 Sum_probs=121.2
Q ss_pred HHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCc-cCCCCccccccccCcchhhcchHHHHHH
Q 007224 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQE-WNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 312 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~-~~p~~~~~~~~~~~~~~~~~~~~~~k~~ 390 (612)
....+..|+++++=+...+.+.+ +|.+ .+.|-|.+-.+. +.+. ++.
T Consensus 131 ~~i~~~~D~lLailPFE~~~y~k---~g~~---------~~yVGHpl~d~i~~~~~---------------------r~~ 177 (381)
T COG0763 131 VKIAKYVDHLLAILPFEPAFYDK---FGLP---------CTYVGHPLADEIPLLPD---------------------REA 177 (381)
T ss_pred HHHHHHhhHeeeecCCCHHHHHh---cCCC---------eEEeCChhhhhcccccc---------------------HHH
Confidence 34456889999999999998886 5543 344444432221 2222 667
Q ss_pred HHHHhCCCCCCCCcEEEEEc-Cccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc
Q 007224 391 LQAEVGLPVDRNIPVIGFIG-RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF 466 (612)
Q Consensus 391 l~~~~gl~~~~~~~~il~iG-rl~~-~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~ 466 (612)
+++++|++.+. ..+.+..| |-++ .+-...+++++.++.. ++.++++--... .++...++...... .......
T Consensus 178 ar~~l~~~~~~-~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~-~~~~~~~~~~~~~~--~~~~~~~ 253 (381)
T COG0763 178 AREKLGIDADE-KTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNA-KYRRIIEEALKWEV--AGLSLIL 253 (381)
T ss_pred HHHHhCCCCCC-CeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcH-HHHHHHHHHhhccc--cCceEEe
Confidence 99999998654 34555566 4444 5677889999999975 789998866544 23333333332221 1112223
Q ss_pred ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC-CCC----------------cccceecCceEEEecccc
Q 007224 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS-TGG----------------LVDTVEEGFTGFQMGSFS 529 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~-~gg----------------~~e~v~~g~~G~l~~~~~ 529 (612)
.+...++.+..||+.+.. +|++.+|+|.+|+|.|++- +.. ++.++-+. .++.++
T Consensus 254 ~~~~~~~a~~~aD~al~a-----SGT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~---~ivPEl- 324 (381)
T COG0763 254 IDGEKRKAFAAADAALAA-----SGTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGR---EIVPEL- 324 (381)
T ss_pred cCchHHHHHHHhhHHHHh-----ccHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCC---ccchHH-
Confidence 445566799999998864 5999999999999999873 332 22222221 111111
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 530 VDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 530 ~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
.-+.-.++.+++++..++.+.
T Consensus 325 ----iq~~~~pe~la~~l~~ll~~~ 345 (381)
T COG0763 325 ----IQEDCTPENLARALEELLLNG 345 (381)
T ss_pred ----HhhhcCHHHHHHHHHHHhcCh
Confidence 013346889999999999884
No 123
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=98.43 E-value=3.5e-06 Score=76.57 Aligned_cols=138 Identities=20% Similarity=0.254 Sum_probs=81.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRV 165 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~ 165 (612)
||++|+... +.++..++.+|.++||+|+++++..+. .+. ...+|+.++
T Consensus 1 KIl~i~~~~---------~~~~~~~~~~L~~~g~~V~ii~~~~~~-~~~----------------------~~~~~i~~~ 48 (139)
T PF13477_consen 1 KILLIGNTP---------STFIYNLAKELKKRGYDVHIITPRNDY-EKY----------------------EIIEGIKVI 48 (139)
T ss_pred CEEEEecCc---------HHHHHHHHHHHHHCCCEEEEEEcCCCc-hhh----------------------hHhCCeEEE
Confidence 789998763 236789999999999999999996432 110 112455555
Q ss_pred EEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc-chHH
Q 007224 166 FVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT-SLIP 244 (612)
Q Consensus 166 ~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~-~~~~ 244 (612)
.++.+ .+ . ...+..+ ..+.+.++. .+|| |||+|...+ ++++
T Consensus 49 ~~~~~---~k------------------~---~~~~~~~-~~l~k~ik~------------~~~D-vIh~h~~~~~~~~~ 90 (139)
T PF13477_consen 49 RLPSP---RK------------------S---PLNYIKY-FRLRKIIKK------------EKPD-VIHCHTPSPYGLFA 90 (139)
T ss_pred EecCC---CC------------------c---cHHHHHH-HHHHHHhcc------------CCCC-EEEEecCChHHHHH
Confidence 55322 01 0 1111111 133333333 2799 999998765 6667
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
.+++... ...|++++.|+...-. .+ .. ......+++..++.+|.+++.
T Consensus 91 ~l~~~~~------~~~~~i~~~hg~~~~~-~~----------~~---------------~~~~~~~~~~~~k~~~~ii~~ 138 (139)
T PF13477_consen 91 MLAKKLL------KNKKVIYTVHGSDFYN-SS----------KK---------------KKLKKFIIKFAFKRADKIIVQ 138 (139)
T ss_pred HHHHHHc------CCCCEEEEecCCeeec-CC----------ch---------------HHHHHHHHHHHHHhCCEEEEc
Confidence 6666553 3489999999643200 00 00 001234567788899999987
Q ss_pred C
Q 007224 325 S 325 (612)
Q Consensus 325 S 325 (612)
|
T Consensus 139 ~ 139 (139)
T PF13477_consen 139 S 139 (139)
T ss_pred C
Confidence 6
No 124
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.42 E-value=3.3e-05 Score=79.22 Aligned_cols=96 Identities=16% Similarity=0.168 Sum_probs=69.6
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEE-EEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~l-vivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
.+++++|..++.+....+++++.++. .++++ +++|.+.+. .+.++++....+ ++.. .. ..+.+.++++.||++|
T Consensus 172 ~iLi~~GG~d~~~~~~~~l~~l~~~~-~~~~i~vv~G~~~~~-~~~l~~~~~~~~-~i~~-~~-~~~~m~~lm~~aDl~I 246 (279)
T TIGR03590 172 RVLVSFGGADPDNLTLKLLSALAESQ-INISITLVTGSSNPN-LDELKKFAKEYP-NIIL-FI-DVENMAELMNEADLAI 246 (279)
T ss_pred eEEEEeCCcCCcCHHHHHHHHHhccc-cCceEEEEECCCCcC-HHHHHHHHHhCC-CEEE-Ee-CHHHHHHHHHHCCEEE
Confidence 47888998888777788889988763 34443 367776543 456666666544 3542 23 3455667999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
. ..|.++.|++++|+|+|+-..
T Consensus 247 s-----~~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 247 G-----AAGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred E-----CCchHHHHHHHcCCCEEEEEe
Confidence 7 377999999999999998764
No 125
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.42 E-value=0.00018 Score=77.69 Aligned_cols=188 Identities=15% Similarity=0.047 Sum_probs=112.5
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
-+.|+.|++..+...+.+.+ .|+ ++.++-|.+=....... +
T Consensus 158 ~~~a~~v~~~~~~t~~~l~~---~g~---------k~~~vGnPv~d~l~~~~---------------------~------ 198 (396)
T TIGR03492 158 SRRCLAVFVRDRLTARDLRR---QGV---------RASYLGNPMMDGLEPPE---------------------R------ 198 (396)
T ss_pred chhhCEEeCCCHHHHHHHHH---CCC---------eEEEeCcCHHhcCcccc---------------------c------
Confidence 45899999999888888875 333 56666666532211110 0
Q ss_pred hCCCCCCCCcE-EEEEcCc--ccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCCCc-----------
Q 007224 395 VGLPVDRNIPV-IGFIGRL--EEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEK----------- 459 (612)
Q Consensus 395 ~gl~~~~~~~~-il~iGrl--~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~----------- 459 (612)
.+++. +.++ +++-|.- +..++...+++++.++.+ +++++++.-.+.... +.+++...+.+..
T Consensus 199 ~~l~~--~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~-~~~~~~l~~~g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 199 KPLLT--GRFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSL-EKLQAILEDLGWQLEGSSEDQTSL 275 (396)
T ss_pred cccCC--CCCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCH-HHHHHHHHhcCceecCCccccchh
Confidence 03332 2344 4444533 335678899999999954 578877653222212 2333333322211
Q ss_pred -----eEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc---cceec-----CceEEEec
Q 007224 460 -----ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV---DTVEE-----GFTGFQMG 526 (612)
Q Consensus 460 -----i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~---e~v~~-----g~~G~l~~ 526 (612)
+... .+ ......+++.||++|.. .|.+..|++++|+|+|.....+.. .+.+. + .++.+
T Consensus 276 ~~~~~~~v~-~~-~~~~~~~l~~ADlvI~r-----SGt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~~l~g-~~~~l- 346 (396)
T TIGR03492 276 FQKGTLEVL-LG-RGAFAEILHWADLGIAM-----AGTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQSRLLG-GSVFL- 346 (396)
T ss_pred hccCceEEE-ec-hHhHHHHHHhCCEEEEC-----cCHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhHhhcC-CEEec-
Confidence 2211 22 23456799999999976 467779999999999998743321 11121 2 22222
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHH
Q 007224 527 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 527 ~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~ 564 (612)
...+++.+++++.+++++ ++.+.+|.+
T Consensus 347 ---------~~~~~~~l~~~l~~ll~d--~~~~~~~~~ 373 (396)
T TIGR03492 347 ---------ASKNPEQAAQVVRQLLAD--PELLERCRR 373 (396)
T ss_pred ---------CCCCHHHHHHHHHHHHcC--HHHHHHHHH
Confidence 556789999999999987 666666653
No 126
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=98.32 E-value=0.0025 Score=66.72 Aligned_cols=222 Identities=17% Similarity=0.118 Sum_probs=140.5
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHHHHHHH-
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE- 394 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~- 394 (612)
-|+.-+++++..++.|.. -|++.+ +|.++-|-+ |.-.+.-. +..........
T Consensus 145 ~S~~hfapte~ar~nLl~---EG~~~~------~IfvtGnt~iDal~~~~~-----------------~~~~~~~~~~~~ 198 (383)
T COG0381 145 LSDLHFAPTEIARKNLLR---EGVPEK------RIFVTGNTVIDALLNTRD-----------------RVLEDSKILAKG 198 (383)
T ss_pred hhhhhcCChHHHHHHHHH---cCCCcc------ceEEeCChHHHHHHHHHh-----------------hhccchhhHHhh
Confidence 578889999999999986 677755 788888754 22111100 00001122222
Q ss_pred hCCCCCCCCcEEEEEcCcccc-cCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007224 395 VGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 395 ~gl~~~~~~~~il~iGrl~~~-Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~ 471 (612)
++.. .++.+++..=|-+.. +++..+++++.++.+ +++.++.--...+..++.. ....+...++..+-.+.-...
T Consensus 199 ~~~~--~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~viyp~H~~~~v~e~~-~~~L~~~~~v~li~pl~~~~f 275 (383)
T COG0381 199 LDDK--DKKYILVTAHRRENVGEPLEEICEALREIAEEYPDVIVIYPVHPRPRVRELV-LKRLKNVERVKLIDPLGYLDF 275 (383)
T ss_pred hccc--cCcEEEEEcchhhcccccHHHHHHHHHHHHHhCCCceEEEeCCCChhhhHHH-HHHhCCCCcEEEeCCcchHHH
Confidence 2221 223445555565543 888999998888866 4666665443333222222 122122234766666666677
Q ss_pred HHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC-cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHH
Q 007224 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRA 550 (612)
Q Consensus 472 ~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~l 550 (612)
+.++..|-+++ -..|..+=||-..|+||++-+..- -+|.+..| +-.++ ..|.+.+.+.+.++
T Consensus 276 ~~L~~~a~~il-----tDSGgiqEEAp~lg~Pvl~lR~~TERPE~v~ag-t~~lv-----------g~~~~~i~~~~~~l 338 (383)
T COG0381 276 HNLMKNAFLIL-----TDSGGIQEEAPSLGKPVLVLRDTTERPEGVEAG-TNILV-----------GTDEENILDAATEL 338 (383)
T ss_pred HHHHHhceEEE-----ecCCchhhhHHhcCCcEEeeccCCCCccceecC-ceEEe-----------CccHHHHHHHHHHH
Confidence 77888886666 246889999999999999997543 45555444 44443 46889999999999
Q ss_pred HHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 551 LATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 551 l~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+++ ++.+++|+.. ...|.--...+++.+++++-.
T Consensus 339 l~~--~~~~~~m~~~--~npYgdg~as~rIv~~l~~~~ 372 (383)
T COG0381 339 LED--EEFYERMSNA--KNPYGDGNASERIVEILLNYF 372 (383)
T ss_pred hhC--hHHHHHHhcc--cCCCcCcchHHHHHHHHHHHh
Confidence 998 6677776553 466777777888888777654
No 127
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.19 E-value=0.00065 Score=72.05 Aligned_cols=192 Identities=19% Similarity=0.175 Sum_probs=119.6
Q ss_pred HHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHH
Q 007224 311 MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 311 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~ 390 (612)
.+..-+..|.++++=+...+.+.+ +|+ +++.+-|.+= +...+..+ ...
T Consensus 127 ~~~i~~~~D~ll~ifPFE~~~y~~---~g~---------~~~~VGHPl~-d~~~~~~~-------------------~~~ 174 (373)
T PF02684_consen 127 AKKIKKYVDHLLVIFPFEPEFYKK---HGV---------PVTYVGHPLL-DEVKPEPD-------------------RAE 174 (373)
T ss_pred HHHHHHHHhheeECCcccHHHHhc---cCC---------CeEEECCcch-hhhccCCC-------------------HHH
Confidence 344456789999999999988886 554 3555555431 11111110 334
Q ss_pred HHHHhCCCCCCCCcE-EEEEc-Cccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEec
Q 007224 391 LQAEVGLPVDRNIPV-IGFIG-RLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 391 l~~~~gl~~~~~~~~-il~iG-rl~~-~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
.++.+ ++. +.++ .++.| |-.+ .+....+++++.++.+ +++++++..... ...+.+++.....+..+....
T Consensus 175 ~~~~~-l~~--~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~-~~~~~i~~~~~~~~~~~~~~~- 249 (373)
T PF02684_consen 175 AREKL-LDP--DKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPE-VHEELIEEILAEYPPDVSIVI- 249 (373)
T ss_pred HHHhc-CCC--CCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCH-HHHHHHHHHHHhhCCCCeEEE-
Confidence 45555 553 3454 44455 5555 4566999999999976 789998876543 344556666555543333222
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-C----------------CcccceecCceEEEeccc
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-G----------------GLVDTVEEGFTGFQMGSF 528 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-g----------------g~~e~v~~g~~G~l~~~~ 528 (612)
......+.++.||+.+.. .|++-+|++.+|+|.|+.-. . |++.++-+.. +++++
T Consensus 250 -~~~~~~~~m~~ad~al~~-----SGTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~---v~PEl 320 (373)
T PF02684_consen 250 -IEGESYDAMAAADAALAA-----SGTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE---VVPEL 320 (373)
T ss_pred -cCCchHHHHHhCcchhhc-----CCHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC---cchhh
Confidence 123345689999999975 48999999999999998743 2 2233222210 11111
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 529 SVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 529 ~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+-+..+++.+++.+.+++.+
T Consensus 321 -----iQ~~~~~~~i~~~~~~ll~~ 340 (373)
T PF02684_consen 321 -----IQEDATPENIAAELLELLEN 340 (373)
T ss_pred -----hcccCCHHHHHHHHHHHhcC
Confidence 22466899999999999998
No 128
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.12 E-value=0.00081 Score=70.86 Aligned_cols=229 Identities=17% Similarity=0.085 Sum_probs=142.7
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHH
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 386 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 386 (612)
.-.+.+..+...|.|++-|+..++.+.+ .|.. ++.+.-| +......+ .....
T Consensus 167 ~~~~~~~~~~~i~li~aQse~D~~Rf~~---LGa~--------~v~v~GN---lKfd~~~~--------------~~~~~ 218 (419)
T COG1519 167 LKFLARLLFKNIDLILAQSEEDAQRFRS---LGAK--------PVVVTGN---LKFDIEPP--------------PQLAA 218 (419)
T ss_pred HHHHHHHHHHhcceeeecCHHHHHHHHh---cCCc--------ceEEecc---eeecCCCC--------------hhhHH
Confidence 3455677788999999999999999997 6765 3444443 22111110 12233
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEE-
Q 007224 387 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV- 463 (612)
Q Consensus 387 ~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~- 463 (612)
....++..++.+ +++++..+. ...--+.+++++..+++ ++..++++=.-++ --+.++++.++.+-.+.-+
T Consensus 219 ~~~~~r~~l~~~----r~v~iaaST--H~GEeei~l~~~~~l~~~~~~~llIlVPRHpE-Rf~~v~~l~~~~gl~~~~rS 291 (419)
T COG1519 219 ELAALRRQLGGH----RPVWVAAST--HEGEEEIILDAHQALKKQFPNLLLILVPRHPE-RFKAVENLLKRKGLSVTRRS 291 (419)
T ss_pred HHHHHHHhcCCC----CceEEEecC--CCchHHHHHHHHHHHHhhCCCceEEEecCChh-hHHHHHHHHHHcCCeEEeec
Confidence 455677777643 468888887 23334668999998877 6787887766553 3455566665543211111
Q ss_pred -------------eccChHHHHHHHHhcCEEEeCC-CCCCCcHHHHHHHHcCCceEEcC-CCCcccc---eecCceEEEe
Q 007224 464 -------------AKFNIPLAHMIIAGADFILIPS-RFEPCGLIQLHAMRYGTVPIVAS-TGGLVDT---VEEGFTGFQM 525 (612)
Q Consensus 464 -------------~~~~~~~~~~~l~~adi~l~pS-~~E~~gl~~lEAma~G~PvI~s~-~gg~~e~---v~~g~~G~l~ 525 (612)
+.--+ ++..+|..||+.++-- ..+--|--++|+.++|+|||.-. +=...|+ +...+.|+.+
T Consensus 292 ~~~~~~~~tdV~l~DtmG-EL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v 370 (419)
T COG1519 292 QGDPPFSDTDVLLGDTMG-ELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLLQAGAGLQV 370 (419)
T ss_pred CCCCCCCCCcEEEEecHh-HHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHHhcCCeEEE
Confidence 11112 3446999999988864 44556778999999999999864 2333333 3334457755
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 526 GSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 526 ~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
.|.+.+++.+..++.+ +..+.+|++++..---..+...+++++.++
T Consensus 371 ------------~~~~~l~~~v~~l~~~--~~~r~~~~~~~~~~v~~~~gal~r~l~~l~ 416 (419)
T COG1519 371 ------------EDADLLAKAVELLLAD--EDKREAYGRAGLEFLAQNRGALARTLEALK 416 (419)
T ss_pred ------------CCHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 5688888888888887 777778877764322223334444444443
No 129
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.12 E-value=0.001 Score=73.83 Aligned_cols=153 Identities=16% Similarity=0.163 Sum_probs=97.2
Q ss_pred HHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHHH
Q 007224 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEA 390 (612)
Q Consensus 312 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~ 390 (612)
+..-+..|+++|.=+...+.+.+ .|++ ++.+-|.+ |. ..+..+ +++
T Consensus 356 kki~k~vD~ll~IfPFE~~~y~~---~gv~---------v~yVGHPL~d~--i~~~~~-------------------~~~ 402 (608)
T PRK01021 356 TILEKYLDLLLLILPFEQNLFKD---SPLR---------TVYLGHPLVET--ISSFSP-------------------NLS 402 (608)
T ss_pred HHHHHHhhhheecCccCHHHHHh---cCCC---------eEEECCcHHhh--cccCCC-------------------HHH
Confidence 44456789999999998888875 5553 45555543 32 111111 456
Q ss_pred HHHHhCCCCCCCCcEEEEEc-Cccc-ccCHHHHHHHHH--hcccCCcEEEEEeCCchhHHHHHHHHHHHCCC-ceEEEec
Q 007224 391 LQAEVGLPVDRNIPVIGFIG-RLEE-QKGSDILAAAIP--HFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGVAK 465 (612)
Q Consensus 391 l~~~~gl~~~~~~~~il~iG-rl~~-~Kg~d~ll~a~~--~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~i~~~~~ 465 (612)
.++++|++.+. ..+-++.| |-.+ .+..+.+++++. .+. ++.++++... +....+.+++...+.+. .+...
T Consensus 403 ~r~~lgl~~~~-~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~-~~l~fvvp~a-~~~~~~~i~~~~~~~~~~~~~ii-- 477 (608)
T PRK01021 403 WKEQLHLPSDK-PIVAAFPGSRRGDILRNLTIQVQAFLASSLA-STHQLLVSSA-NPKYDHLILEVLQQEGCLHSHIV-- 477 (608)
T ss_pred HHHHcCCCCCC-CEEEEECCCCHHHHHHHHHHHHHHHHHHHhc-cCeEEEEecC-chhhHHHHHHHHhhcCCCCeEEe--
Confidence 68888986432 23445555 5544 567889999998 554 3688877543 32344566665543321 12211
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.+....++++.||+.+.. +|++-+|++.+|+|.|+.-
T Consensus 478 -~~~~~~~~m~aaD~aLaa-----SGTaTLEaAL~g~PmVV~Y 514 (608)
T PRK01021 478 -PSQFRYELMRECDCALAK-----CGTIVLETALNQTPTIVTC 514 (608)
T ss_pred -cCcchHHHHHhcCeeeec-----CCHHHHHHHHhCCCEEEEE
Confidence 122235799999999975 5899999999999999863
No 130
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=98.05 E-value=0.0051 Score=68.46 Aligned_cols=124 Identities=11% Similarity=0.017 Sum_probs=78.3
Q ss_pred cEEEEEcCccc-----ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--H
Q 007224 404 PVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--A 476 (612)
Q Consensus 404 ~~il~iGrl~~-----~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l--~ 476 (612)
++++..|.... .+-...+++|+.++ +.++++..++.. .. ...+.++....+++.. +++ .
T Consensus 298 ~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l---~~~viw~~~~~~--~~------~~~p~Nv~i~~w~Pq~---~lL~hp 363 (507)
T PHA03392 298 VVYVSFGSSIDTNDMDNEFLQMLLRTFKKL---PYNVLWKYDGEV--EA------INLPANVLTQKWFPQR---AVLKHK 363 (507)
T ss_pred EEEEECCCCCcCCCCCHHHHHHHHHHHHhC---CCeEEEEECCCc--Cc------ccCCCceEEecCCCHH---HHhcCC
Confidence 56677787642 23456667777766 357776555431 10 2245566655554543 367 4
Q ss_pred hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 477 ~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
.++++|. -|-..++.||+.+|+|+|+-...+ ....+.+-+.|..+. -..-+.+++.++|.++++
T Consensus 364 ~v~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G~~l~--------~~~~t~~~l~~ai~~vl~ 431 (507)
T PHA03392 364 NVKAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIGRALD--------TVTVSAAQLVLAIVDVIE 431 (507)
T ss_pred CCCEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcEEEec--------cCCcCHHHHHHHHHHHhC
Confidence 5888883 344568999999999999986543 333444455676551 023467999999999998
Q ss_pred h
Q 007224 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 432 ~ 432 (507)
T PHA03392 432 N 432 (507)
T ss_pred C
Confidence 7
No 131
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=98.03 E-value=0.00066 Score=68.36 Aligned_cols=182 Identities=20% Similarity=0.252 Sum_probs=110.0
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAE 394 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~ 394 (612)
+..|+.+++++....+.+.. +|..+.++..-..+.-+.| ...|.|. .++.++
T Consensus 124 ~Pla~~ii~P~~~~~~~~~~---~G~~p~~i~~~~giae~~~---v~~f~pd----------------------~evlke 175 (346)
T COG1817 124 LPLADVIITPEAIDEEELLD---FGADPNKISGYNGIAELAN---VYGFVPD----------------------PEVLKE 175 (346)
T ss_pred hhhhhheecccccchHHHHH---hCCCccceecccceeEEee---cccCCCC----------------------HHHHHH
Confidence 56789999999988888775 7766554332222322222 2335553 356788
Q ss_pred hCCCCCCCCcEEEE-E---cC--cccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccCh
Q 007224 395 VGLPVDRNIPVIGF-I---GR--LEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 395 ~gl~~~~~~~~il~-i---Gr--l~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~ 468 (612)
+|+..+ .+.|++ . |. ...+++.+.+.++++.|.+-. ++++-... ..++.-+++.+.+ ...-..
T Consensus 176 Lgl~~~--~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k~g--iV~ipr~~-----~~~eife~~~n~i--~pk~~v 244 (346)
T COG1817 176 LGLEEG--ETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKKYG--IVLIPREK-----EQAEIFEGYRNII--IPKKAV 244 (346)
T ss_pred cCCCCC--CceEEEeeccccceeeccccchhhHHHHHHHHHhCc--EEEecCch-----hHHHHHhhhcccc--CCcccc
Confidence 999754 245544 1 11 234678888888998885533 55555432 2233333333211 111111
Q ss_pred HHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC---CcccceecCceEEEecccccccCCCCCCCHHHHHH
Q 007224 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG---GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g---g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~ 545 (612)
+ .-.++-.|++++ -+-|.-.-||...|+|.|++.-| ++.+...+ .|.++ ...|+.+..+
T Consensus 245 D-~l~Llyya~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~lie--~G~~~----------~s~~~~~~~~ 306 (346)
T COG1817 245 D-TLSLLYYATLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLIE--KGLLY----------HSTDEIAIVE 306 (346)
T ss_pred c-HHHHHhhhheee-----cCCchHHHHHHHhCCceEEecCCccccccHHHHh--cCcee----------ecCCHHHHHH
Confidence 1 113777888888 45678889999999999999844 23344433 46766 6678888888
Q ss_pred HHHHHHHh
Q 007224 546 TVRRALAT 553 (612)
Q Consensus 546 ~l~~ll~~ 553 (612)
.+.+.+.+
T Consensus 307 ~a~~~l~~ 314 (346)
T COG1817 307 YAVRNLKY 314 (346)
T ss_pred HHHHHhhc
Confidence 88888876
No 132
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.88 E-value=0.0005 Score=74.47 Aligned_cols=177 Identities=16% Similarity=0.073 Sum_probs=102.3
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC---CceEEEecc
Q 007224 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 466 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~i~~~~~~ 466 (612)
|+++|||.+ ..+++.+.++ .|=-+..++++.++.+ |+.+|++...+.. .++.+++...+.+ +++.+...-
T Consensus 276 R~~~gLp~d--~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~-~~~~l~~~~~~~Gv~~~Ri~f~~~~ 350 (468)
T PF13844_consen 276 RAQYGLPED--AVVFGSFNNL--FKISPETLDLWARILKAVPNSRLWLLRFPAS-GEARLRRRFAAHGVDPDRIIFSPVA 350 (468)
T ss_dssp TGGGT--SS--SEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEEEEEEETSTT-HHHHHHHHHHHTTS-GGGEEEEE--
T ss_pred HHHcCCCCC--ceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH-HHHHHHHHHHHcCCChhhEEEcCCC
Confidence 788999854 3555555554 5666777777777766 8999988765442 3456666666655 456665544
Q ss_pred ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec------CceEEEecccccccCCCCCCCH
Q 007224 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVDV 540 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~------g~~G~l~~~~~~~~~~v~~~d~ 540 (612)
+.+.--..+..+|++|=|..+ +-+.+.+||+.+|+|||+-....+..=+.- |-.-+ -..|.
T Consensus 351 ~~~ehl~~~~~~DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~El------------IA~s~ 417 (468)
T PF13844_consen 351 PREEHLRRYQLADICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPEL------------IADSE 417 (468)
T ss_dssp -HHHHHHHGGG-SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGG------------B-SSH
T ss_pred CHHHHHHHhhhCCEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchh------------cCCCH
Confidence 444333577889999976432 457899999999999998864332221110 11112 24689
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHH---HH--HhcCCcHHHHHHHHHHHHHHH
Q 007224 541 AAVSTTVRRALATYGTQALAEMMKN---GM--AQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 541 ~~la~~l~~ll~~~~~~~~~~~~~~---~~--~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+++++.-.++..+ .+.++++.++ .+ ..-|+-+..++.+++.|+.+.
T Consensus 418 ~eYv~~Av~La~D--~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~mW 468 (468)
T PF13844_consen 418 EEYVEIAVRLATD--PERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQMW 468 (468)
T ss_dssp HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC--HHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHhC
Confidence 9999999999998 4444433332 23 245889999999999998763
No 133
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=97.82 E-value=0.0019 Score=69.83 Aligned_cols=157 Identities=17% Similarity=0.163 Sum_probs=92.6
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
++....|..... .+++-.+++.+.+-++++++...+.+ ......+.++.-...++... ++..||++|.
T Consensus 239 ~vyvslGt~~~~--~~l~~~~~~a~~~l~~~vi~~~~~~~-------~~~~~~p~n~~v~~~~p~~~---~l~~ad~vI~ 306 (406)
T COG1819 239 IVYVSLGTVGNA--VELLAIVLEALADLDVRVIVSLGGAR-------DTLVNVPDNVIVADYVPQLE---LLPRADAVIH 306 (406)
T ss_pred eEEEEcCCcccH--HHHHHHHHHHHhcCCcEEEEeccccc-------cccccCCCceEEecCCCHHH---HhhhcCEEEe
Confidence 455556776554 34444444444445888888774421 11112344454444434333 8999999996
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHH
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL 559 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~ 559 (612)
.. --.++.||+.+|+|+|+--.+. ..+-+++-+.|..+ -.+..+.+.++++|.+++++..-...
T Consensus 307 hG----G~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l--------~~~~l~~~~l~~av~~vL~~~~~~~~ 374 (406)
T COG1819 307 HG----GAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIAL--------PFEELTEERLRAAVNEVLADDSYRRA 374 (406)
T ss_pred cC----CcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceec--------CcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 43 3457899999999999986553 44456666788766 23478999999999999997221111
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHH
Q 007224 560 AEMMKNGMAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 560 ~~~~~~~~~~~~sw~~~a~~~~~~y 584 (612)
.+..++.+.+.-.-+.+++.+++++
T Consensus 375 ~~~~~~~~~~~~g~~~~a~~le~~~ 399 (406)
T COG1819 375 AERLAEEFKEEDGPAKAADLLEEFA 399 (406)
T ss_pred HHHHHHHhhhcccHHHHHHHHHHHH
Confidence 1222222334444444455444444
No 134
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=97.79 E-value=0.0026 Score=66.67 Aligned_cols=119 Identities=13% Similarity=0.127 Sum_probs=71.6
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
.++++.|. -+...+++++.++ +++.+++ |.... .. ..++.++... .+..+....++..||++|.
T Consensus 190 ~iLv~~g~----~~~~~l~~~l~~~--~~~~~i~-~~~~~-~~-------~~~~~~v~~~-~~~~~~~~~~l~~ad~vI~ 253 (321)
T TIGR00661 190 YILVYIGF----EYRYKILELLGKI--ANVKFVC-YSYEV-AK-------NSYNENVEIR-RITTDNFKELIKNAELVIT 253 (321)
T ss_pred cEEEECCc----CCHHHHHHHHHhC--CCeEEEE-eCCCC-Cc-------cccCCCEEEE-ECChHHHHHHHHhCCEEEE
Confidence 35566544 2456677777766 4555544 43221 11 1233445544 4554556779999999997
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCCCCccc------ceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVASTGGLVD------TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e------~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-+= ..++.||+++|+|+|.....+..| .+.+.+.|..+ +..+. ++.+++...+++
T Consensus 254 ~~G----~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l----------~~~~~-~~~~~~~~~~~~ 314 (321)
T TIGR00661 254 HGG----FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIAL----------EYKEL-RLLEAILDIRNM 314 (321)
T ss_pred CCC----hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEc----------ChhhH-HHHHHHHhcccc
Confidence 542 246899999999999998766444 34455567765 66565 444444444443
No 135
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=97.52 E-value=0.038 Score=56.34 Aligned_cols=164 Identities=16% Similarity=0.158 Sum_probs=107.0
Q ss_pred cEEEEEcC-cccccCHHHHHHHHHhcccCCcEEEE-EeC--CchhHHHHHHHHHHHC-C-CceEEEecc-ChHHHHHHHH
Q 007224 404 PVIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIV-LGT--GKKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 476 (612)
Q Consensus 404 ~~il~iGr-l~~~Kg~d~ll~a~~~l~~~~~~lvi-vG~--g~~~~~~~l~~l~~~~-~-~~i~~~~~~-~~~~~~~~l~ 476 (612)
++.+.+|. -++.-++..+++++.+....++++++ +|- |++.|.+++++.+.++ + +++.....+ +-++.-++++
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~~v~ii~PlsYp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~lL~ 225 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGDNVKIIVPMGYPANNQAYIEEVRQAGLALFGAENFQILTEKLPFDDYLALLR 225 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCCCeEEEEECCcCCCCHHHHHHHHHHHHHhcCcccEEehhhhCCHHHHHHHHH
Confidence 45556665 45777888899999888778888776 444 6778888888888775 4 466655544 4455557999
Q ss_pred hcCEEEeCCC-CCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 477 GADFILIPSR-FEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 477 ~adi~l~pS~-~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
.||+.++.-. .++.|+.++ .+..|+||+.+.. .-..++.+.+. -+++ + -+.-|...+.++=+++.
T Consensus 226 ~~Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv-~Vlf---~-----~d~L~~~~v~e~~rql~--- 292 (322)
T PRK02797 226 QCDLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGL-PVLF---T-----GDDLDEDIVREAQRQLA--- 292 (322)
T ss_pred hCCEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCC-eEEe---c-----CCcccHHHHHHHHHHHH---
Confidence 9999998764 489998776 5899999999964 44555555443 3333 0 02222222222111111
Q ss_pred CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
..-++.+. |+-++..+.|.++|....
T Consensus 293 ------~~dk~~I~--Ff~pn~~~~W~~~l~~~~ 318 (322)
T PRK02797 293 ------SVDKNIIA--FFSPNYLQGWRNALAIAA 318 (322)
T ss_pred ------hhCcceee--ecCHhHHHHHHHHHHHhh
Confidence 11112233 999999999999998764
No 136
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=97.27 E-value=0.0034 Score=59.00 Aligned_cols=131 Identities=18% Similarity=0.215 Sum_probs=72.4
Q ss_pred CcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccc
Q 007224 194 YQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQG 273 (612)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~ 273 (612)
|...+..-..-.+++.+++..|... -|.|| ||++|. ..--+++++..+ +++|++..+- ..|..
T Consensus 39 ~~~~~e~~~~rg~av~~a~~~L~~~-------Gf~PD-vI~~H~--GWGe~Lflkdv~------P~a~li~Y~E-~~y~~ 101 (171)
T PF12000_consen 39 YVRDFEAAVLRGQAVARAARQLRAQ-------GFVPD-VIIAHP--GWGETLFLKDVF------PDAPLIGYFE-FYYRA 101 (171)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHc-------CCCCC-EEEEcC--CcchhhhHHHhC------CCCcEEEEEE-EEecC
Confidence 4555555556666777766665432 36799 888874 223455677775 7888776543 11111
Q ss_pred cCCcccccccCCCcccccccccccCCCCCcCCcchhH-HHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeE
Q 007224 274 RFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINW-MKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIK 352 (612)
Q Consensus 274 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~ 352 (612)
.- ...+++.++.... ......+..|. .-..+..+|..+++|.+.+..+-.. + +.+|.
T Consensus 102 ~g-----~d~~FDpe~p~~~------~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~fP~~----------~-r~kI~ 159 (171)
T PF12000_consen 102 SG-----ADVGFDPEFPPSL------DDRARLRMRNAHNLLALEQADAGISPTRWQRSQFPAE----------F-RSKIS 159 (171)
T ss_pred CC-----CcCCCCCCCCCCH------HHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhCCHH----------H-HcCcE
Confidence 10 1122222221100 00001112222 2335668999999999988764421 1 13999
Q ss_pred EeeCCCccCcc
Q 007224 353 GIVNGMDVQEW 363 (612)
Q Consensus 353 vI~Ngvd~~~~ 363 (612)
||+-|||++.+
T Consensus 160 VihdGiDt~~~ 170 (171)
T PF12000_consen 160 VIHDGIDTDRF 170 (171)
T ss_pred Eeecccchhhc
Confidence 99999998754
No 137
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=97.14 E-value=0.013 Score=63.90 Aligned_cols=179 Identities=14% Similarity=0.057 Sum_probs=113.4
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCc-hhHHHHHHHHHHHCC---CceEEEec
Q 007224 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYP---EKARGVAK 465 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~---~~i~~~~~ 465 (612)
|+++|||.+ .++|+.--...|-...+++...++.+ |+..|++.|.|+ +...+.++++.++.+ .++++...
T Consensus 421 R~~lglp~~----avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~ 496 (620)
T COG3914 421 RAQLGLPED----AVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPP 496 (620)
T ss_pred hhhcCCCCC----eEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCC
Confidence 788999843 24444444566766666666666655 888999888865 567888999998876 36666666
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCccc-----ce-ecCceEEEecccccccCCCCCCC
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD-----TV-EEGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e-----~v-~~g~~G~l~~~~~~~~~~v~~~d 539 (612)
-+.+.-.+-|.-||+++=+.-+ +-..+.+||+.+|+|||+-..--+.- ++ .-|..-++ ..+
T Consensus 497 ~~~~~h~a~~~iADlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~si~~~agi~e~v------------A~s 563 (620)
T COG3914 497 APNEDHRARYGIADLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGASIATNAGIPELV------------ADS 563 (620)
T ss_pred CCCHHHHHhhchhheeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHHHHHhcCCchhh------------cCC
Confidence 6667666789999999965443 34578999999999999753211110 11 11222222 234
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHH----HH--hcCCcHHHHHHHHHHHHHHHHc
Q 007224 540 VAAVSTTVRRALATYGTQALAEMMKNG----MA--QDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 540 ~~~la~~l~~ll~~~~~~~~~~~~~~~----~~--~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
.++.++.-.++-.+ +..++ ..+.. +. --|+.+..+++++++|.++...
T Consensus 564 ~~dYV~~av~~g~d--ral~q-~~r~~l~~~r~tspL~d~~~far~le~~y~~M~~~ 617 (620)
T COG3914 564 RADYVEKAVAFGSD--RALRQ-QVRAELKRSRQTSPLFDPKAFARKLETLYWGMWSE 617 (620)
T ss_pred HHHHHHHHHHhccc--HHHHH-hhHHHHHhccccCcccCHHHHHHHHHHHHHHHHHh
Confidence 55555444444444 21222 22222 11 2588999999999999998754
No 138
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=97.08 E-value=0.011 Score=63.76 Aligned_cols=157 Identities=14% Similarity=0.127 Sum_probs=86.0
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEE-EEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
++++..|++...+. +.+-.++..+.+.+++++ ..|.+.. ...++ +.+.++......+. ..+++.||++|
T Consensus 227 ~v~vs~Gs~~~~~~-~~~~~~~~al~~~~~~~i~~~g~~~~--~~~~~----~~~~~v~~~~~~p~---~~ll~~~~~~I 296 (392)
T TIGR01426 227 VVLISLGTVFNNQP-SFYRTCVEAFRDLDWHVVLSVGRGVD--PADLG----ELPPNVEVRQWVPQ---LEILKKADAFI 296 (392)
T ss_pred EEEEecCccCCCCH-HHHHHHHHHHhcCCCeEEEEECCCCC--hhHhc----cCCCCeEEeCCCCH---HHHHhhCCEEE
Confidence 45677888643321 232223333333455655 4555432 11222 23445654433343 25899999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH-H
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-Q 557 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~-~ 557 (612)
..+ | ..+++||+++|+|.|+....+ ..+.+.+.+.|..+. -+..+.++++++|++++.++.- +
T Consensus 297 ~hg---G-~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~--------~~~~~~~~l~~ai~~~l~~~~~~~ 364 (392)
T TIGR01426 297 THG---G-MNSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLP--------PEEVTAEKLREAVLAVLSDPRYAE 364 (392)
T ss_pred ECC---C-chHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEec--------cccCCHHHHHHHHHHHhcCHHHHH
Confidence 643 2 247899999999999976543 223344445676541 1234689999999999987321 2
Q ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHH
Q 007224 558 ALAEMMKNGMAQDLSWKGPAKKWEET 583 (612)
Q Consensus 558 ~~~~~~~~~~~~~~sw~~~a~~~~~~ 583 (612)
..+++.+. +.+.-.-+..++.++++
T Consensus 365 ~~~~l~~~-~~~~~~~~~aa~~i~~~ 389 (392)
T TIGR01426 365 RLRKMRAE-IREAGGARRAADEIEGF 389 (392)
T ss_pred HHHHHHHH-HHHcCCHHHHHHHHHHh
Confidence 22223222 33334555555555544
No 139
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=97.07 E-value=0.66 Score=50.53 Aligned_cols=215 Identities=13% Similarity=0.122 Sum_probs=114.5
Q ss_pred hHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCC-CccccccccCcchhhcchHHH
Q 007224 309 NWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPL-TDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 309 ~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~-~~~~~~~~~~~~~~~~~~~~~ 387 (612)
.+++..++.+|.|.+=-+...+.+.+ .|++.. ++.+.+ |+.+.-|. ..+. ..
T Consensus 168 ~l~r~vl~~~~~ItvRD~~S~~~Lk~---lGv~~~------~v~~~a---DpAF~L~~~~~~~---------------~~ 220 (426)
T PRK10017 168 QLANYVFGHCDALILRESVSLDLMKR---SNITTA------KVEHGV---DTAWLVDHHTEDF---------------TA 220 (426)
T ss_pred HHHHHHHhcCCEEEEccHHHHHHHHH---hCCCcc------ceEEec---ChhhhCCcccccc---------------cc
Confidence 45677788999988877777777775 676533 444433 44332221 1000 00
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcC-cccc-c--------CHHHHHHHHHhcccCCcEEEEEeCC------chhHHHHHHH
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGR-LEEQ-K--------GSDILAAAIPHFIKENVQIIVLGTG------KKPMEKQLEQ 451 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGr-l~~~-K--------g~d~ll~a~~~l~~~~~~lvivG~g------~~~~~~~l~~ 451 (612)
...+....+.+. ..++|++.=| +.+. | -...+.+++..+.+.+.+++++-.- .+......++
T Consensus 221 ~~~~~~~~~~~~--~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~ 298 (426)
T PRK10017 221 SYAVQHWLDVAA--QQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALN 298 (426)
T ss_pred chhhhhhhcccc--cCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHH
Confidence 001111112211 2346655433 3211 1 1245667777776667776665531 1112223344
Q ss_pred HHHHCCC--ceEE-EeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC-cccceec-CceEEEec
Q 007224 452 LEILYPE--KARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEE-GFTGFQMG 526 (612)
Q Consensus 452 l~~~~~~--~i~~-~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~-g~~G~l~~ 526 (612)
+...++. +... ...++..++..++++||++|-.-. -.++=|++.|+|+|+-.... +..++.+ |...+++
T Consensus 299 l~~~~~~~~~~~vi~~~~~~~e~~~iIs~~dl~ig~Rl-----Ha~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~- 372 (426)
T PRK10017 299 LRQHVSDPARYHVVMDELNDLEMGKILGACELTVGTRL-----HSAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAI- 372 (426)
T ss_pred HHHhcccccceeEecCCCChHHHHHHHhhCCEEEEecc-----hHHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEe-
Confidence 4444432 1222 223555666679999999885433 25667999999999987532 1122211 1122322
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH
Q 007224 527 SFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM 567 (612)
Q Consensus 527 ~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~ 567 (612)
-++.-+.+++.+.+.+++++ ++.+++..++++
T Consensus 373 -------~~~~l~~~~Li~~v~~~~~~--r~~~~~~l~~~v 404 (426)
T PRK10017 373 -------DIRHLLDGSLQAMVADTLGQ--LPALNARLAEAV 404 (426)
T ss_pred -------chhhCCHHHHHHHHHHHHhC--HHHHHHHHHHHH
Confidence 22556778999999999998 555555544444
No 140
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=97.07 E-value=0.021 Score=61.03 Aligned_cols=193 Identities=13% Similarity=0.144 Sum_probs=96.1
Q ss_pred HHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHH
Q 007224 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~ 389 (612)
.........|.+++.|+...+.+.+ .++.+.+ .++..|..-... +........+
T Consensus 127 ~~~~~~~~~d~~~~~s~~~~~~~~~--~f~~~~~--------~i~~~G~PR~D~----------------l~~~~~~~~~ 180 (369)
T PF04464_consen 127 NYKRNYRNYDYFIVSSEFEKEIFKK--AFGYPED--------KILVTGYPRNDY----------------LFNKSKENRN 180 (369)
T ss_dssp HHHHHHTT-SEEEESSHHHHHHHHH--HTT--GG--------GEEES--GGGHH----------------HHHSTT-HHH
T ss_pred hhhhhccCCcEEEECCHHHHHHHHH--HhccCcc--------eEEEeCCCeEhH----------------HhccCHHHHH
Confidence 3444567889999999999988885 3666543 234445532111 0011112256
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCH------H--HHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceE
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGS------D--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR 461 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~------d--~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~ 461 (612)
.+++.++++. ++.+|+|.=.+.....- . .-++.+..+...++.+++-.. +......... .....++.
T Consensus 181 ~i~~~~~~~~--~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~H--p~~~~~~~~~-~~~~~~i~ 255 (369)
T PF04464_consen 181 RIKKKLGIDK--DKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPH--PNMKKKFKDF-KEDNSNII 255 (369)
T ss_dssp HHHHHTT--S--S-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--S--HHHHTT-----TT-TTTEE
T ss_pred HHHHHhccCC--CCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeC--chhhhchhhh-hccCCcEE
Confidence 7888888764 44699998655432221 1 123333334446787777553 2233333332 22233344
Q ss_pred EEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc--CCCC-------cccceecCceEEEeccccccc
Q 007224 462 GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA--STGG-------LVDTVEEGFTGFQMGSFSVDC 532 (612)
Q Consensus 462 ~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s--~~gg-------~~e~v~~g~~G~l~~~~~~~~ 532 (612)
.... .+...+++..||++|- -++-++.|++.+++|||-- |..- ..+ ..+..-|-.
T Consensus 256 ~~~~--~~~~~~ll~~aDiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~-~~~~~pg~~-------- 319 (369)
T PF04464_consen 256 FVSD--NEDIYDLLAAADILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFD-YEEDLPGPI-------- 319 (369)
T ss_dssp E-TT---S-HHHHHHT-SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS--TTTSSSS-E--------
T ss_pred ECCC--CCCHHHHHHhcCEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCc-hHhhCCCce--------
Confidence 3322 2346679999999993 3677999999999999954 3211 111 111122332
Q ss_pred CCCCCCCHHHHHHHHHHHHHh
Q 007224 533 EAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 533 ~~v~~~d~~~la~~l~~ll~~ 553 (612)
..+.++|.++|+.++++
T Consensus 320 ----~~~~~eL~~~i~~~~~~ 336 (369)
T PF04464_consen 320 ----VYNFEELIEAIENIIEN 336 (369)
T ss_dssp ----ESSHHHHHHHHTTHHHH
T ss_pred ----eCCHHHHHHHHHhhhhC
Confidence 36899999999999886
No 141
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.04 E-value=0.066 Score=55.84 Aligned_cols=187 Identities=12% Similarity=0.060 Sum_probs=119.4
Q ss_pred CeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcc
Q 007224 350 GIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFI 429 (612)
Q Consensus 350 ~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~ 429 (612)
....+++++|.+.|.|-++.. .-.--+.++|.-.+. .++.++++.
T Consensus 162 ~~~~~~~a~d~~~~~~i~~da------------------------------~~~~dL~~ign~~pD-----r~e~~ke~~ 206 (373)
T COG4641 162 NCYYLPWAVDDSLFHPIPPDA------------------------------SYDVDLNLIGNPYPD-----RVEEIKEFF 206 (373)
T ss_pred ceeccCccCCchhcccCCccc------------------------------cceeeeEEecCCCcc-----HHHHHHHHh
Confidence 577789999999888764210 111258888887665 344444442
Q ss_pred c-------CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccCh-HHHHHHHHhcCEEEeCCCC---CC---CcHHHH
Q 007224 430 K-------ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI-PLAHMIIAGADFILIPSRF---EP---CGLIQL 495 (612)
Q Consensus 430 ~-------~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~-~~~~~~l~~adi~l~pS~~---E~---~gl~~l 495 (612)
. .+-++.+.|..- -...+... .-.++...++.+. ...+..++.-|+.+.-++. ++ +.+-+.
T Consensus 207 ~~ps~kl~v~rr~~~~g~~y--~~~~~~~~---~~~~~~yIg~~~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvF 281 (373)
T COG4641 207 VEPSFKLMVDRRFYVLGPRY--PDDIWGRT---WEPNVQYIGYYNPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVF 281 (373)
T ss_pred hccchhhhccceeeecCCcc--chhhhccc---ccchhhhhhccCccchhhhcccccceeeeecHHHHHhhcCCchhhHH
Confidence 2 135666777651 01111111 0111222233333 4455677788888776543 33 378899
Q ss_pred HHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhcCCcH
Q 007224 496 HAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWK 574 (612)
Q Consensus 496 EAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~-~~~~~~~~~~~~~~~~sw~ 574 (612)
|+|+||.+-|++..-++.-.+.+|..-++ ..|..++.+.++.++.... +.+..+.+.+.+...|+.+
T Consensus 282 eiagc~~~liT~~~~~~e~~f~pgk~~iv------------~~d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~ht~~ 349 (373)
T COG4641 282 EIAGCGGFLITDYWKDLEKFFKPGKDIIV------------YQDSKDLKEKLKYLLNHPDERKEIAECAYERVLARHTYE 349 (373)
T ss_pred HHhhcCCccccccHHHHHHhcCCchheEE------------ecCHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhccHH
Confidence 99999999999988888888888866554 4799999999999999832 2344444445556669988
Q ss_pred HHHHHHHHHHHHHH
Q 007224 575 GPAKKWEETLLNLE 588 (612)
Q Consensus 575 ~~a~~~~~~y~~l~ 588 (612)
.-+.++.+...++.
T Consensus 350 ~r~~~~~~~i~sI~ 363 (373)
T COG4641 350 ERIFKLLNEIASIN 363 (373)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877777777644
No 142
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=97.01 E-value=0.17 Score=53.39 Aligned_cols=91 Identities=18% Similarity=0.087 Sum_probs=59.4
Q ss_pred cEEEEEcCc-c-cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 404 PVIGFIGRL-E-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~il~iGrl-~-~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
.+.++-|.- . -.+-...+++++.++.+...++++.+... . +.+++...+.. .+... . ....+++.||+.
T Consensus 169 ~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~--~-~~i~~~~~~~~-~~~~~----~-~~~~~m~~aDla 239 (347)
T PRK14089 169 TIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFK--G-KDLKEIYGDIS-EFEIS----Y-DTHKALLEAEFA 239 (347)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCc--H-HHHHHHHhcCC-CcEEe----c-cHHHHHHhhhHH
Confidence 344555542 2 24566778899999876557788877654 2 44444433322 12211 1 235689999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+.. .|.+-+|++.+|+|.|+.-
T Consensus 240 l~~-----SGT~TLE~al~g~P~Vv~Y 261 (347)
T PRK14089 240 FIC-----SGTATLEAALIGTPFVLAY 261 (347)
T ss_pred Hhc-----CcHHHHHHHHhCCCEEEEE
Confidence 964 5889999999999999964
No 143
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=96.81 E-value=0.5 Score=49.12 Aligned_cols=163 Identities=15% Similarity=0.145 Sum_probs=106.4
Q ss_pred cEEEEEcC-cccccCHHHHHHHHHhcccCCcEEEE-EeCC--chhHHHHHHHHHHHC-C-CceEEEecc-ChHHHHHHHH
Q 007224 404 PVIGFIGR-LEEQKGSDILAAAIPHFIKENVQIIV-LGTG--KKPMEKQLEQLEILY-P-EKARGVAKF-NIPLAHMIIA 476 (612)
Q Consensus 404 ~~il~iGr-l~~~Kg~d~ll~a~~~l~~~~~~lvi-vG~g--~~~~~~~l~~l~~~~-~-~~i~~~~~~-~~~~~~~~l~ 476 (612)
+.-+.+|. -++.-++-.+++++.+....++++++ +|-| ++.|.+++.+.+.++ + +++.....+ +-++.-++++
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~~~~~~lF~~~~~~iL~e~mpf~eYl~lL~ 264 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFGDDVKIIVPLSYGANNQAYIQQVIQAGKELFGAENFQILTEFMPFDEYLALLS 264 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcCCCeEEEEECCCCCchHHHHHHHHHHHHHhcCccceeEhhhhCCHHHHHHHHH
Confidence 45555665 45677788888888876667888766 3444 467888888888775 4 245544433 5566667999
Q ss_pred hcCEEEeCCCC-CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC
Q 007224 477 GADFILIPSRF-EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 477 ~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 555 (612)
.||+.++.... .+.|+.++ .+.+|+||+.+........+.+..--+++ .-|.-|.+.+.++=+++..- +
T Consensus 265 ~cDl~if~~~RQQgiGnI~l-Ll~~G~~v~L~~~np~~~~l~~~~ipVlf--------~~d~L~~~~v~ea~rql~~~-d 334 (360)
T PF07429_consen 265 RCDLGIFNHNRQQGIGNICL-LLQLGKKVFLSRDNPFWQDLKEQGIPVLF--------YGDELDEALVREAQRQLANV-D 334 (360)
T ss_pred hCCEEEEeechhhhHhHHHH-HHHcCCeEEEecCChHHHHHHhCCCeEEe--------ccccCCHHHHHHHHHHHhhC-c
Confidence 99999999855 89998776 69999999999877766666555334444 11344455555544444432 1
Q ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 007224 556 TQALAEMMKNGMAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 556 ~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~ 586 (612)
. + .-.|.-.+..+.|...+.-
T Consensus 335 k--------~--~iaFf~pny~~~w~~~l~~ 355 (360)
T PF07429_consen 335 K--------Q--QIAFFAPNYLQGWRQALRL 355 (360)
T ss_pred c--------c--ceeeeCCchHHHHHHHHHH
Confidence 1 1 1236666777777776653
No 144
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=96.79 E-value=0.2 Score=49.60 Aligned_cols=102 Identities=12% Similarity=0.085 Sum_probs=54.9
Q ss_pred CCcEEEEEcCcccccCH--HHHHHHHHhc---cc-CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccC-----hHH
Q 007224 402 NIPVIGFIGRLEEQKGS--DILAAAIPHF---IK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN-----IPL 470 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~--d~ll~a~~~l---~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~-----~~~ 470 (612)
...+-++||.-.+.-.+ |...+.+..+ .+ ....|++--+-. -...++++....-....+.++-+ .+.
T Consensus 161 rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR--Tp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY 238 (329)
T COG3660 161 RQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR--TPDTVKSILKNNLNSSPGIVWNNEDTGYNPY 238 (329)
T ss_pred CceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC--CcHHHHHHHHhccccCceeEeCCCCCCCCch
Confidence 34688889876654333 3333333322 22 467777765532 12233333332111122222111 123
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
..+++.||.+|.+.. .=.-.-||.+.|+||-+.--
T Consensus 239 -~~~La~Adyii~TaD---SinM~sEAasTgkPv~~~~~ 273 (329)
T COG3660 239 -IDMLAAADYIISTAD---SINMCSEAASTGKPVFILEP 273 (329)
T ss_pred -HHHHhhcceEEEecc---hhhhhHHHhccCCCeEEEec
Confidence 359999999998755 33457899999999987653
No 145
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=96.72 E-value=0.0077 Score=64.81 Aligned_cols=81 Identities=11% Similarity=0.162 Sum_probs=45.7
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcc
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
.|| +||.|-..+++++.++.... ++|.+++.|.+.-.. +...++.+-.+...++- -..
T Consensus 401 ~Pd-lI~GnYsDgnlvA~LLs~~l-------gv~~~~iaHsLek~K-y~~s~~~w~e~e~~Yhf-------------s~q 458 (550)
T PF00862_consen 401 KPD-LIIGNYSDGNLVASLLSRKL-------GVTQCFIAHSLEKTK-YEDSDLYWKEIEEKYHF-------------SCQ 458 (550)
T ss_dssp --S-EEEEEHHHHHHHHHHHHHHH-------T-EEEEE-SS-HHHH-HHTTTTTSHHHHHHH-H-------------HHH
T ss_pred CCc-EEEeccCcchHHHHHHHhhc-------CCceehhhhcccccc-ccccCCCHHHHHhhccc-------------hhh
Confidence 599 99999888899999998874 999999999775311 11111111011111100 012
Q ss_pred hhHHHHHHHhcCEEEecCHHHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQ 330 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~ 330 (612)
+.-...++..||.|||.+.....
T Consensus 459 ftAd~iamn~adfIItST~QEI~ 481 (550)
T PF00862_consen 459 FTADLIAMNAADFIITSTYQEIA 481 (550)
T ss_dssp HHHHHHHHHHSSEEEESSHHHHH
T ss_pred hhHHHHHhhcCCEEEEcchHhhc
Confidence 22334568899999998876554
No 146
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=96.50 E-value=0.27 Score=56.63 Aligned_cols=261 Identities=20% Similarity=0.240 Sum_probs=156.2
Q ss_pred CcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCcc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
.| +|-.||++.-++|-+++... .++++.+..|. .|+.... .-+- .
T Consensus 141 ~d-~vwihdyhlmllp~~lr~~~------~~~~ig~flhs-----pfpssEi~r~lp----------------------~ 186 (732)
T KOG1050|consen 141 GD-IVWIHDYHLMLLPQMLRERF------NSAKIGFFLHS-----PFPSSEIYRCLP----------------------V 186 (732)
T ss_pred CC-cEEEEcchhhccchhhhccc------ccceEEEeccC-----CCChHHHHHhcc----------------------c
Confidence 56 89999999999998888654 57788788883 3332111 1110 0
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccc-------------cCCccchhhhhccCeEEeeCCCccCccCCCCccccccc
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGE-------------DKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVK 374 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~-------------~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~ 374 (612)
.+-.-.++..+|.+=.....++..+.+.. .-+++-. -+...+.++|-|+|+..|.-....+
T Consensus 187 r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~r--gr~~~v~~~pigid~~r~v~~~~~~---- 260 (732)
T KOG1050|consen 187 RKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGR--GRDVSVKALPIGIDVQRFVKLLELP---- 260 (732)
T ss_pred HHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEec--cceeeeeecccccchHHhhccccch----
Confidence 11112234455555544444443322200 0111100 0123567788888887764322100
Q ss_pred cCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc------CCcEEEEEeCCc----hh
Q 007224 375 YDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK------ENVQIIVLGTGK----KP 444 (612)
Q Consensus 375 ~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~------~~~~lvivG~g~----~~ 444 (612)
.-..-..+++..+ .++.+|+-+-|+...||...=+.++.++.. ..+.++.+..+. +.
T Consensus 261 --------~~~~~~~ei~~~~-----~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~ 327 (732)
T KOG1050|consen 261 --------YVGSKGMEIKEPF-----KGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKE 327 (732)
T ss_pred --------hHHHHHHHHhhhc-----cCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchH
Confidence 0011123344333 256789999999999999887888877765 356666655543 11
Q ss_pred ---HHHHHHHHH----HHCCCc----eE-EEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcC----CceEEcC
Q 007224 445 ---MEKQLEQLE----ILYPEK----AR-GVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG----TVPIVAS 508 (612)
Q Consensus 445 ---~~~~l~~l~----~~~~~~----i~-~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G----~PvI~s~ 508 (612)
.+.++.... .++... +. ..-.++..++-++++-+|+.++.+..+|..++.+|...|. .+-|.+.
T Consensus 328 v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlse 407 (732)
T KOG1050|consen 328 VEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSE 407 (732)
T ss_pred HHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcccCCceEEee
Confidence 222232222 233221 11 1123356666689999999999999999999999999873 6677777
Q ss_pred CCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 509 TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 509 ~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
.-|..++.+++. .+ +.|.|.++++..|..++..+
T Consensus 408 f~G~~~tl~d~a--iv----------vnpw~~~~~~~~i~~al~~s 441 (732)
T KOG1050|consen 408 FIGDDTTLEDAA--IV----------VNPWDGDEFAILISKALTMS 441 (732)
T ss_pred eccccccccccC--EE----------ECCcchHHHHHHHHHHhhcC
Confidence 777777776552 32 38999999999999999984
No 147
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=95.97 E-value=2.5 Score=44.01 Aligned_cols=136 Identities=13% Similarity=0.211 Sum_probs=73.7
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhccc-CCc---EEEEEeCCc-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK-ENV---QIIVLGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~---~lvivG~g~-~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ 477 (612)
..+++.+|.= .-|.+++-.++..... +++ -++|.|.-- ....+++...+.+.+. +. ...|..+. .+++++
T Consensus 220 ~~Ilvs~GGG--~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~-i~-I~~f~~~~-~~ll~g 294 (400)
T COG4671 220 FDILVSVGGG--ADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPH-IS-IFEFRNDF-ESLLAG 294 (400)
T ss_pred ceEEEecCCC--hhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCCC-eE-EEEhhhhH-HHHHHh
Confidence 3467777753 3354544444433322 333 356666643 3344555555554442 33 33454444 469999
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc-c-ceec---CceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV-D-TVEE---GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~-e-~v~~---g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
|+..|.-+=+ ++..|-++.|+|.+.-....-. | ++.- .+-|+.= ..+=+.-.++.|+++|..+++
T Consensus 295 A~~vVSm~GY----NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~d------vL~pe~lt~~~La~al~~~l~ 364 (400)
T COG4671 295 ARLVVSMGGY----NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVD------VLLPENLTPQNLADALKAALA 364 (400)
T ss_pred hheeeecccc----hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcce------eeCcccCChHHHHHHHHhccc
Confidence 9999953322 5778999999998876533222 2 2221 1223320 001133347889999988887
Q ss_pred h
Q 007224 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
-
T Consensus 365 ~ 365 (400)
T COG4671 365 R 365 (400)
T ss_pred C
Confidence 4
No 148
>PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes. It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY.
Probab=95.88 E-value=0.016 Score=59.01 Aligned_cols=45 Identities=16% Similarity=0.330 Sum_probs=39.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCc
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~ 130 (612)
|+|++|+...+|+ ..||++..+.+|.+.|-+.-..|..|++....
T Consensus 1 ~~V~ll~EGtYPy-v~GGVSsW~~~LI~glpe~~F~v~~i~a~~~~ 45 (268)
T PF11997_consen 1 MDVCLLTEGTYPY-VRGGVSSWVHQLIRGLPEHEFHVYAIGANPED 45 (268)
T ss_pred CeEEEEecCcCCC-CCCchhHHHHHHHhcCCCceEEEEEEeCCccc
Confidence 8999999999996 88999999999999998887888888877433
No 149
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=95.13 E-value=0.48 Score=49.32 Aligned_cols=103 Identities=17% Similarity=0.097 Sum_probs=66.7
Q ss_pred cEEEEEcCccccc--CHH---HHHHHHHhccc-CCcEEEEEeCC--chhHHHHHHHHHHHCCCceEEEecc-ChHHHHHH
Q 007224 404 PVIGFIGRLEEQK--GSD---ILAAAIPHFIK-ENVQIIVLGTG--KKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMI 474 (612)
Q Consensus 404 ~~il~iGrl~~~K--g~d---~ll~a~~~l~~-~~~~lvivG~g--~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~~~ 474 (612)
.+.+.||.-+..- +.+ .+++.+..+.+ ...++.|..+- +++.++.++++....+. +..+..- ..+ ...+
T Consensus 148 ~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L~~~~~~~~~-~~~~~~~~~nP-y~~~ 225 (311)
T PF06258_consen 148 RVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAALRELLKDNPG-VYIWDGTGENP-YLGF 225 (311)
T ss_pred eEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHHHHhhcCCCc-eEEecCCCCCc-HHHH
Confidence 4666788644322 334 55556655554 45788888874 45567777766654442 3222221 223 3469
Q ss_pred HHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC
Q 007224 475 IAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 475 l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg 511 (612)
|+.||.++++.. .-.-+-||.+.|+||.+-...+
T Consensus 226 La~ad~i~VT~D---SvSMvsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 226 LAAADAIVVTED---SVSMVSEAAATGKPVYVLPLPG 259 (311)
T ss_pred HHhCCEEEEcCc---cHHHHHHHHHcCCCEEEecCCC
Confidence 999999999865 4456899999999999998766
No 150
>PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E.coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B.
Probab=95.08 E-value=4.2 Score=40.92 Aligned_cols=152 Identities=14% Similarity=0.153 Sum_probs=78.0
Q ss_pred HHHHHhCCCCCCCCcEE---EEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHH-----------
Q 007224 390 ALQAEVGLPVDRNIPVI---GFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEI----------- 454 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~i---l~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~----------- 454 (612)
..|..+... ..+... .|+||.+.+||+..+++.-++..+ ++..-++-|-....-.-.+.+-..
T Consensus 169 ~~Rstywkd--~se~nmnv~~yigR~Tt~kG~~~mfD~h~~~lK~~~~~t~~~GierS~A~~~i~d~~~~~~y~~~~~~~ 246 (355)
T PF11440_consen 169 KYRSTYWKD--VSEKNMNVNRYIGRQTTWKGPRRMFDLHEKILKPAGFKTIMEGIERSPAKISIKDHGIPYEYYPKLDCD 246 (355)
T ss_dssp HHHHHH-----GGGSEEEEEEEE--SSGGG-HHHHHHHHHHTTTTTT-EEEEE---SSTHHHHHHHTT--EEEE-CTGGG
T ss_pred HHHHHHhhh--hHhhhcccceeeeeeeeecCcHHHhhhHHHhcCCcchhHHhhhhhcCCceeeeecCCcccccCcccccc
Confidence 344444432 233455 899999999999999999998876 678888877533111111111100
Q ss_pred --H-CC-CceEEEeccChHHHHHHHHhcCEEEeCCC------CCCCcHHHHHHHHcCCceEEc-CCCCccc-------ce
Q 007224 455 --L-YP-EKARGVAKFNIPLAHMIIAGADFILIPSR------FEPCGLIQLHAMRYGTVPIVA-STGGLVD-------TV 516 (612)
Q Consensus 455 --~-~~-~~i~~~~~~~~~~~~~~l~~adi~l~pS~------~E~~gl~~lEAma~G~PvI~s-~~gg~~e-------~v 516 (612)
+ .+ .-+...+.+-.++.-+.++.+-+...-+. .+..-.+.+|..|||+.+|-- ++|-... ++
T Consensus 247 ~~~~~pN~~~~v~~~Yi~~E~~~~Maks~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~ 326 (355)
T PF11440_consen 247 EPKPAPNSPVPVYGPYIRSEGLERMAKSLFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYI 326 (355)
T ss_dssp G---SSS--EEEESS--HHHHHHHHHTEEEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGG
T ss_pred CcccCCCCcceecchhhhHHHHHHHhhccceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceee
Confidence 0 01 12333444555555568888888776553 245778999999999977654 3443222 22
Q ss_pred ecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 517 EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 517 ~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.+.. |.+. +|..|.++-.+.|.++..+
T Consensus 327 ~~~~-~~I~---------~De~dle~T~ekl~E~a~~ 353 (355)
T PF11440_consen 327 DHPY-SAIY---------FDENDLESTVEKLIEVANN 353 (355)
T ss_dssp SS---S-EE---------E-TTSHHHHHHHHHHHHT-
T ss_pred ccCc-ceeE---------eccchHHHHHHHHHHHhcc
Confidence 2222 3332 4888888877777777654
No 151
>PLN02670 transferase, transferring glycosyl groups
Probab=93.24 E-value=2 Score=47.51 Aligned_cols=107 Identities=13% Similarity=0.090 Sum_probs=65.0
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecCceEEEecccccccCCCCCCCHHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~ 548 (612)
+++...+-.+-+. || ++++||+++|+|+|+-... .....+.+-+.|+.+.....+ ..-+.+++.++|+
T Consensus 352 IL~H~~v~~FvtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~l~~~~~~----~~~~~e~i~~av~ 424 (472)
T PLN02670 352 ILSHESVGGFLTH---CGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLEVPRDERD----GSFTSDSVAESVR 424 (472)
T ss_pred HhcCcccceeeec---CCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEEeeccccC----CcCcHHHHHHHHH
Confidence 7888887655555 65 5899999999999997543 233444455677765211000 1246899999999
Q ss_pred HHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHH
Q 007224 549 RALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 549 ~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l 587 (612)
+++.+..-+.+++.+++. +.+.=+-+..++.+++.+.+.
T Consensus 425 ~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~ 466 (472)
T PLN02670 425 LAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLREN 466 (472)
T ss_pred HHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHh
Confidence 999763222333333322 234444555566666555544
No 152
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=93.16 E-value=0.21 Score=42.42 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=57.6
Q ss_pred EEEEeCCchhHHHHHHHHHHHCCCceEEE---eccChHH--HHHHHHhcCEEEeCCCC---CCCcHHHHHHHHcCCceEE
Q 007224 435 IIVLGTGKKPMEKQLEQLEILYPEKARGV---AKFNIPL--AHMIIAGADFILIPSRF---EPCGLIQLHAMRYGTVPIV 506 (612)
Q Consensus 435 lvivG~g~~~~~~~l~~l~~~~~~~i~~~---~~~~~~~--~~~~l~~adi~l~pS~~---E~~gl~~lEAma~G~PvI~ 506 (612)
++|+|. .+.+...++++.++++..+..+ .++.... ++..+..||++|++..+ ...-.+--+|-.+|+|++-
T Consensus 2 vliVGG-~~~~~~~~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~~aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~ 80 (97)
T PF10087_consen 2 VLIVGG-REDRERRYKRILEKYGGKLIHHGRDGGDEKKASRLPSKIKKADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIY 80 (97)
T ss_pred EEEEcC-CcccHHHHHHHHHHcCCEEEEEecCCCCccchhHHHHhcCCCCEEEEEeCCcChHHHHHHHHHHHHcCCcEEE
Confidence 466775 2226788888888888777777 4444444 77799999999998765 3345567778889999999
Q ss_pred cCCCCcccc
Q 007224 507 ASTGGLVDT 515 (612)
Q Consensus 507 s~~gg~~e~ 515 (612)
++..|+..+
T Consensus 81 ~~~~~~~~l 89 (97)
T PF10087_consen 81 SRSRGVSSL 89 (97)
T ss_pred ECCCCHHHH
Confidence 986665443
No 153
>PLN02562 UDP-glycosyltransferase
Probab=93.11 E-value=1.4 Score=48.37 Aligned_cols=128 Identities=10% Similarity=0.046 Sum_probs=74.7
Q ss_pred cEEEEEcCcc---cccCHHHHHHHHHhcccCCcEEEE-EeCCch-hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 404 PVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 404 ~~il~iGrl~---~~Kg~d~ll~a~~~l~~~~~~lvi-vG~g~~-~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
.+++..|... +.+-+..++.+++++ ..+|++ +..+.. ...+.+ ....++++....+.+.. .+++..
T Consensus 275 vvyvsfGS~~~~~~~~~~~~l~~~l~~~---g~~fiW~~~~~~~~~l~~~~---~~~~~~~~~v~~w~PQ~---~iL~h~ 345 (448)
T PLN02562 275 VIYISFGSWVSPIGESNVRTLALALEAS---GRPFIWVLNPVWREGLPPGY---VERVSKQGKVVSWAPQL---EVLKHQ 345 (448)
T ss_pred eEEEEecccccCCCHHHHHHHHHHHHHC---CCCEEEEEcCCchhhCCHHH---HHHhccCEEEEecCCHH---HHhCCC
Confidence 5777788754 344556666666665 335554 332211 111111 11223334333332333 278888
Q ss_pred CEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
++.++-+. || ++.+||+.+|+|+|+-... .....+.+. +.|+-+ ...+.++++++|++++.
T Consensus 346 ~v~~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~----------~~~~~~~l~~~v~~~l~ 412 (448)
T PLN02562 346 AVGCYLTH---CGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRI----------SGFGQKEVEEGLRKVME 412 (448)
T ss_pred ccceEEec---CcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEe----------CCCCHHHHHHHHHHHhC
Confidence 76555555 55 5899999999999987543 334444432 456654 44578999999999997
Q ss_pred h
Q 007224 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 413 ~ 413 (448)
T PLN02562 413 D 413 (448)
T ss_pred C
Confidence 6
No 154
>PLN02448 UDP-glycosyltransferase family protein
Probab=93.00 E-value=2.2 Score=47.02 Aligned_cols=133 Identities=14% Similarity=0.135 Sum_probs=73.9
Q ss_pred CcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~il~iGrl~~--~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
..+++..|.... ..-+..++++++. .+..++++..++. ..+.+. .+++.... .|-... ++++..++
T Consensus 275 ~vvyvsfGs~~~~~~~~~~~~~~~l~~---~~~~~lw~~~~~~---~~~~~~---~~~~~~v~-~w~pQ~--~iL~h~~v 342 (459)
T PLN02448 275 SVLYVSLGSFLSVSSAQMDEIAAGLRD---SGVRFLWVARGEA---SRLKEI---CGDMGLVV-PWCDQL--KVLCHSSV 342 (459)
T ss_pred ceEEEeecccccCCHHHHHHHHHHHHh---CCCCEEEEEcCch---hhHhHh---ccCCEEEe-ccCCHH--HHhccCcc
Confidence 356677787642 2224444444444 4778887665431 112222 12223323 343222 37888887
Q ss_pred EEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 481 ILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 481 ~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
..+-+. +| ++++||+++|+|+|+-...+ ....+.+. +.|+-+.... + .-+..+.+++++++++++.+
T Consensus 343 ~~fvtH---gG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~-~--~~~~~~~~~l~~av~~vl~~ 415 (459)
T PLN02448 343 GGFWTH---CGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREV-G--EETLVGREEIAELVKRFMDL 415 (459)
T ss_pred ceEEec---CchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEeccc-c--cCCcCcHHHHHHHHHHHhcC
Confidence 544444 44 58999999999999986543 33334432 3566541000 0 00134789999999999975
No 155
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=92.34 E-value=14 Score=37.49 Aligned_cols=90 Identities=17% Similarity=0.294 Sum_probs=56.0
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEE-EEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
+++..|.= ..|+ +..+.+..+...++.+- ++|.+.+.+.+ +.+...+++. +..+ .+.+.+..++..||..|.
T Consensus 161 ilI~lGGs-Dpk~--lt~kvl~~L~~~~~nl~iV~gs~~p~l~~-l~k~~~~~~~-i~~~--~~~~dma~LMke~d~aI~ 233 (318)
T COG3980 161 ILITLGGS-DPKN--LTLKVLAELEQKNVNLHIVVGSSNPTLKN-LRKRAEKYPN-INLY--IDTNDMAELMKEADLAIS 233 (318)
T ss_pred EEEEccCC-Chhh--hHHHHHHHhhccCeeEEEEecCCCcchhH-HHHHHhhCCC-eeeE--ecchhHHHHHHhcchhee
Confidence 56666653 3443 45566666655455543 45665554444 4444455553 3332 234556679999999985
Q ss_pred CCCCCCCcHHHHHHHHcCCceEE
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIV 506 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~ 506 (612)
.-|.++.||...|+|.++
T Consensus 234 -----AaGstlyEa~~lgvP~l~ 251 (318)
T COG3980 234 -----AAGSTLYEALLLGVPSLV 251 (318)
T ss_pred -----ccchHHHHHHHhcCCceE
Confidence 468999999999999433
No 156
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=91.81 E-value=8.2 Score=40.80 Aligned_cols=102 Identities=13% Similarity=-0.034 Sum_probs=64.2
Q ss_pred CcEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC-CceE-EEeccChHHHHHHHHhc
Q 007224 403 IPVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKAR-GVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~--d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~i~-~~~~~~~~~~~~~l~~a 478 (612)
..+++..|.-.+.|.+ +.+.+.+..+.+.+++++++|...+......+++..... ..+. ..+..+-.++..+++.|
T Consensus 184 ~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a 263 (352)
T PRK10422 184 NYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALIDHA 263 (352)
T ss_pred CeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHHhC
Confidence 3566677765667764 467777777766688999998654322333444544322 1222 23344556677899999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
|++|-.-. ..+-=|.++|+|+|+--.
T Consensus 264 ~l~v~nDS-----Gp~HlAaA~g~P~v~lfG 289 (352)
T PRK10422 264 QLFIGVDS-----APAHIAAAVNTPLICLFG 289 (352)
T ss_pred CEEEecCC-----HHHHHHHHcCCCEEEEEC
Confidence 99995432 223336789999998753
No 157
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=91.39 E-value=2.1 Score=44.92 Aligned_cols=112 Identities=19% Similarity=0.199 Sum_probs=69.5
Q ss_pred HHHHHHHhCCCCCCCCcE-EEEEcC-cccccCHH--HHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEE-
Q 007224 388 KEALQAEVGLPVDRNIPV-IGFIGR-LEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG- 462 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~-il~iGr-l~~~Kg~d--~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~- 462 (612)
.+.+..+++++. ++++ ++..|. ..+.|.+. .+.+.+..+.+.+.+++++|+..+ ++..+++....+..+..
T Consensus 161 ~~~~~~~~~~~~--~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e--~~~~~~i~~~~~~~~~~l 236 (334)
T TIGR02195 161 QAAALAKFGLDT--ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKD--HPAGNEIEALLPGELRNL 236 (334)
T ss_pred HHHHHHHcCCCC--CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhh--HHHHHHHHHhCCcccccC
Confidence 334556666642 2344 445554 44666544 777777777666789999997652 34445555544433332
Q ss_pred EeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.+..+-.++..+++.||++|-.-. ..+-=|.+.|+|+|+--
T Consensus 237 ~g~~sL~el~ali~~a~l~I~~DS-----Gp~HlAaA~~~P~i~lf 277 (334)
T TIGR02195 237 AGETSLDEAVDLIALAKAVVTNDS-----GLMHVAAALNRPLVALY 277 (334)
T ss_pred CCCCCHHHHHHHHHhCCEEEeeCC-----HHHHHHHHcCCCEEEEE
Confidence 234455667789999999996432 22333779999999864
No 158
>PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes. It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important.
Probab=91.24 E-value=0.99 Score=41.97 Aligned_cols=20 Identities=20% Similarity=0.233 Sum_probs=17.0
Q ss_pred HHhcCEEEecCHHHHHHHHc
Q 007224 315 ILESDMVLTVSPHYAQELVS 334 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~ 334 (612)
..-||+|++.|.+..+.+.+
T Consensus 117 aLaAD~v~FNS~~nr~sFL~ 136 (168)
T PF12038_consen 117 ALAADRVVFNSAFNRDSFLD 136 (168)
T ss_pred HHhceeeeecchhhHHHHHH
Confidence 45899999999999888764
No 159
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=91.02 E-value=1.3 Score=41.66 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=22.8
Q ss_pred HhcCEEEecCHHHHHHHHccccCCccchh
Q 007224 316 LESDMVLTVSPHYAQELVSGEDKGVELDN 344 (612)
Q Consensus 316 ~~ad~vi~vS~~~~~~l~~~~~~g~~~~~ 344 (612)
..+|..++.|+..++++.+ .|++.++
T Consensus 136 ~~~D~y~Vase~~~~~l~~---~Gi~~~~ 161 (169)
T PF06925_consen 136 PGVDRYFVASEEVKEELIE---RGIPPER 161 (169)
T ss_pred CCCCEEEECCHHHHHHHHH---cCCChhH
Confidence 3689999999999999997 8998773
No 160
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=90.66 E-value=4.4 Score=44.56 Aligned_cols=69 Identities=20% Similarity=0.177 Sum_probs=47.9
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCC----CcccceecC-ceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++..++-.+-+. || ++++||+++|+|+|+-... .....+.+. +.|+.+. ..-+.++++++|
T Consensus 337 iL~h~~v~~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~---------~~~~~~~v~~av 404 (451)
T PLN02410 337 VLSHPAVGGFWSH---CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVE---------GDLDRGAVERAV 404 (451)
T ss_pred HhCCCccCeeeec---CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeC---------CcccHHHHHHHH
Confidence 7888776444444 55 5899999999999997543 233444433 5677551 234789999999
Q ss_pred HHHHHhh
Q 007224 548 RRALATY 554 (612)
Q Consensus 548 ~~ll~~~ 554 (612)
++++.+.
T Consensus 405 ~~lm~~~ 411 (451)
T PLN02410 405 KRLMVEE 411 (451)
T ss_pred HHHHcCC
Confidence 9999763
No 161
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=90.09 E-value=2.9 Score=41.56 Aligned_cols=101 Identities=14% Similarity=0.034 Sum_probs=60.4
Q ss_pred CcEEEEEcCcccccCHHH--HHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceE-EEeccChHHHHHHHHhcC
Q 007224 403 IPVIGFIGRLEEQKGSDI--LAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKAR-GVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~--ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~-~~~~~~~~~~~~~l~~ad 479 (612)
..+++..|.-.+.|.+.. ..+.+..+.+..++++++|...+..++..+++....+..+. ..+..+-.+...+++.||
T Consensus 106 ~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~~a~ 185 (247)
T PF01075_consen 106 PYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALISRAD 185 (247)
T ss_dssp SEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHHTSS
T ss_pred CeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHhcCC
Confidence 346666776667776544 88888888776689999998775445555566655442233 334456666778999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
++|-+-. -.+-=|.+.|+|+|+--
T Consensus 186 ~~I~~Dt-----g~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 186 LVIGNDT-----GPMHLAAALGTPTVALF 209 (247)
T ss_dssp EEEEESS-----HHHHHHHHTT--EEEEE
T ss_pred EEEecCC-----hHHHHHHHHhCCEEEEe
Confidence 9996543 23344788999999874
No 162
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=89.16 E-value=21 Score=37.54 Aligned_cols=101 Identities=12% Similarity=0.049 Sum_probs=62.9
Q ss_pred cEEEEEcCcccccC--HHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCC-ceEE-EeccChHHHHHHHHhcC
Q 007224 404 PVIGFIGRLEEQKG--SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARG-VAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~il~iGrl~~~Kg--~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~i~~-~~~~~~~~~~~~l~~ad 479 (612)
.+++..|.-.+.|. .+.+.+.+..+.+.+.+++++|...+...+..+++....+. .+.. .+..+-.++..+++.||
T Consensus 183 ~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~~a~ 262 (344)
T TIGR02201 183 YIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALIDHAR 262 (344)
T ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHHhCC
Confidence 45566665445664 45677777777656789999986543233344455444332 2332 33445566778999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
++|-.-. ..+-=|.|.|+|+|+--.
T Consensus 263 l~Vs~DS-----Gp~HlAaA~g~p~v~Lfg 287 (344)
T TIGR02201 263 LFIGVDS-----VPMHMAAALGTPLVALFG 287 (344)
T ss_pred EEEecCC-----HHHHHHHHcCCCEEEEEC
Confidence 9996532 233337889999998743
No 163
>PLN03004 UDP-glycosyltransferase
Probab=89.13 E-value=5.6 Score=43.72 Aligned_cols=137 Identities=11% Similarity=-0.003 Sum_probs=76.1
Q ss_pred CcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCch-------hHHHHH-HHHHHHCC-CceEEEeccChHHH
Q 007224 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKK-------PMEKQL-EQLEILYP-EKARGVAKFNIPLA 471 (612)
Q Consensus 403 ~~~il~iGrl~--~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~-------~~~~~l-~~l~~~~~-~~i~~~~~~~~~~~ 471 (612)
..+++..|.+. +.+-...|..+++.. ...|+++=..+. .....+ +.+.++.. .++....+.+...
T Consensus 271 sVvyvsfGS~~~~~~~q~~ela~gL~~s---~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~- 346 (451)
T PLN03004 271 SVVFLCFGSLGLFSKEQVIEIAVGLEKS---GQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVP- 346 (451)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHC---CCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHH-
Confidence 45677778763 344555666666655 335554443220 011101 11112111 2233333334433
Q ss_pred HHHHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCC----CCcccceec-CceEEEecccccccCCCCCCCHHHHHH
Q 007224 472 HMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVAST----GGLVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 472 ~~~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~----gg~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~ 545 (612)
+++.+++..+-+. || ++++||+++|+|+|+-.. ......+.+ -+.|+.+... +. ..-+.+++++
T Consensus 347 --iL~H~~v~~FvTH---~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~--~~---~~~~~e~l~~ 416 (451)
T PLN03004 347 --VLNHKAVGGFVTH---CGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNES--ET---GFVSSTEVEK 416 (451)
T ss_pred --HhCCCccceEecc---CcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCC--cC---CccCHHHHHH
Confidence 8999998665555 55 589999999999999854 334444443 3567765100 00 0237899999
Q ss_pred HHHHHHHh
Q 007224 546 TVRRALAT 553 (612)
Q Consensus 546 ~l~~ll~~ 553 (612)
+|++++.+
T Consensus 417 av~~vm~~ 424 (451)
T PLN03004 417 RVQEIIGE 424 (451)
T ss_pred HHHHHhcC
Confidence 99999975
No 164
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=88.97 E-value=11 Score=39.09 Aligned_cols=98 Identities=12% Similarity=0.114 Sum_probs=62.8
Q ss_pred cEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 404 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~--d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
.++++.|.=.+.|.+ +.+.+.+..+.+.+.+++++|.++. ..+..+++....+. ....+..+-.++..+++.||++
T Consensus 181 ~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~-e~~~~~~i~~~~~~-~~l~g~~sL~el~ali~~a~l~ 258 (319)
T TIGR02193 181 YAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA-EKQRAERIAEALPG-AVVLPKMSLAEVAALLAGADAV 258 (319)
T ss_pred EEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHhhCCC-CeecCCCCHHHHHHHHHcCCEE
Confidence 455666654566765 5777888777656789888864442 23444555555443 2223445556677899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
|-.-. . .+-=|.+.|+|+|+--
T Consensus 259 I~~DS---g--p~HlAaa~g~P~i~lf 280 (319)
T TIGR02193 259 VGVDT---G--LTHLAAALDKPTVTLY 280 (319)
T ss_pred EeCCC---h--HHHHHHHcCCCEEEEE
Confidence 96543 2 2333678899999865
No 165
>PLN03007 UDP-glucosyltransferase family protein
Probab=88.76 E-value=7.5 Score=43.18 Aligned_cols=141 Identities=13% Similarity=0.052 Sum_probs=71.7
Q ss_pred CCcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEE-EeCCch------hHHHHHHHHHHHCCCceEEEeccChHHHH
Q 007224 402 NIPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIV-LGTGKK------PMEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 402 ~~~~il~iGrl~~--~Kg~d~ll~a~~~l~~~~~~lvi-vG~g~~------~~~~~l~~l~~~~~~~i~~~~~~~~~~~~ 472 (612)
+..+++..|.... .+....++++++.+ +.+|++ ++.... ...+.+++... +.++....+.+..
T Consensus 285 ~svvyvsfGS~~~~~~~~~~~~~~~l~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~~v~~w~PQ~--- 356 (482)
T PLN03007 285 DSVIYLSFGSVASFKNEQLFEIAAGLEGS---GQNFIWVVRKNENQGEKEEWLPEGFEERTK--GKGLIIRGWAPQV--- 356 (482)
T ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHHC---CCCEEEEEecCCcccchhhcCCHHHHHHhc--cCCEEEecCCCHH---
Confidence 3356777887643 33444444554444 445444 343110 01111111111 2234433333443
Q ss_pred HHHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEecccccccCCCCCCCHHHHHHH
Q 007224 473 MIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~ 546 (612)
.+++.+++-++-+. || ++++||+++|+|+|+-...+ ....+.+ -..|+-++....--..-+.-+.++++++
T Consensus 357 ~iL~h~~v~~fvtH---~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~a 433 (482)
T PLN03007 357 LILDHQATGGFVTH---CGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKA 433 (482)
T ss_pred HHhccCccceeeec---CcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHH
Confidence 37888887555454 54 58999999999999986433 2222221 1334433210000000023478999999
Q ss_pred HHHHHHh
Q 007224 547 VRRALAT 553 (612)
Q Consensus 547 l~~ll~~ 553 (612)
|++++.+
T Consensus 434 v~~~m~~ 440 (482)
T PLN03007 434 VREVIVG 440 (482)
T ss_pred HHHHhcC
Confidence 9999976
No 166
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=88.67 E-value=1.8 Score=48.06 Aligned_cols=126 Identities=17% Similarity=0.140 Sum_probs=71.1
Q ss_pred CCcEEEEEcCccc---ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 402 NIPVIGFIGRLEE---QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~il~iGrl~~---~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
+..+++..|.+.. .+-.+.++++++++ +. ++++.-++.. ...+ +.++...-+.+.. ++++..
T Consensus 276 ~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~--~~-~~iW~~~~~~-----~~~l----~~n~~~~~W~PQ~---~lL~hp 340 (500)
T PF00201_consen 276 KGVVYVSFGSIVSSMPEEKLKEIAEAFENL--PQ-RFIWKYEGEP-----PENL----PKNVLIVKWLPQN---DLLAHP 340 (500)
T ss_dssp TEEEEEE-TSSSTT-HHHHHHHHHHHHHCS--TT-EEEEEETCSH-----GCHH----HTTEEEESS--HH---HHHTST
T ss_pred CCEEEEecCcccchhHHHHHHHHHHHHhhC--CC-cccccccccc-----cccc----cceEEEeccccch---hhhhcc
Confidence 3456677788642 22245567777766 33 7777665531 1112 2235333333432 378777
Q ss_pred CEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 479 DFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 479 di~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.+-++-+. +| ++++||+.+|+|+|+-..-| ....+.+.+.|..+. ...-+.+++.++|.+++++
T Consensus 341 ~v~~fitH---gG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~l~--------~~~~~~~~l~~ai~~vl~~ 409 (500)
T PF00201_consen 341 RVKLFITH---GGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVVLD--------KNDLTEEELRAAIREVLEN 409 (500)
T ss_dssp TEEEEEES-----HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEEEG--------GGC-SHHHHHHHHHHHHHS
T ss_pred cceeeeec---cccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEEEE--------ecCCcHHHHHHHHHHHHhh
Confidence 66555454 55 58999999999999986432 344455555677651 1233579999999999998
No 167
>PLN00164 glucosyltransferase; Provisional
Probab=88.50 E-value=13 Score=41.23 Aligned_cols=74 Identities=16% Similarity=0.026 Sum_probs=47.3
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCC----Ccccce-ecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTG----GLVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~g----g~~e~v-~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++..++..+-+. || ++.+||+.+|+|+|+-..- -....+ +.-+.|+.+.....+ -+.-+.++++++|
T Consensus 352 iL~h~~vg~fvtH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~---~~~~~~e~l~~av 425 (480)
T PLN00164 352 ILAHAAVGGFVTH---CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKR---DNFVEAAELERAV 425 (480)
T ss_pred HhcCcccCeEEee---cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEecccccc---CCcCcHHHHHHHH
Confidence 7888886555454 55 5899999999999997532 233333 333567654100000 0113679999999
Q ss_pred HHHHHh
Q 007224 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
++++.+
T Consensus 426 ~~vm~~ 431 (480)
T PLN00164 426 RSLMGG 431 (480)
T ss_pred HHHhcC
Confidence 999975
No 168
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=88.47 E-value=3.2 Score=42.21 Aligned_cols=102 Identities=16% Similarity=0.161 Sum_probs=64.7
Q ss_pred EEEEEcCccccc--CHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHC-CCceE-EEeccChHHHHHHHHhcCE
Q 007224 405 VIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILY-PEKAR-GVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 405 ~il~iGrl~~~K--g~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~-~~~i~-~~~~~~~~~~~~~l~~adi 480 (612)
+++..|.-.+.| ..+.+.+.++.+.+.+++++++|... .++..+++.... ..++. .....+-.+...+++.||+
T Consensus 124 i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~--e~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li~~~~l 201 (279)
T cd03789 124 VVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA--ERELAEEIAAALGGPRVVNLAGKTSLRELAALLARADL 201 (279)
T ss_pred EEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh--hHHHHHHHHHhcCCCccccCcCCCCHHHHHHHHHhCCE
Confidence 444555545555 45678888888876689999998755 344555555544 12222 2333345666789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 513 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 513 (612)
+|-+.. |..-+ |.+.|+|+|+--.....
T Consensus 202 ~I~~Ds----g~~Hl-A~a~~~p~i~l~g~~~~ 229 (279)
T cd03789 202 VVTNDS----GPMHL-AAALGTPTVALFGPTDP 229 (279)
T ss_pred EEeeCC----HHHHH-HHHcCCCEEEEECCCCc
Confidence 996542 34333 46999999988644333
No 169
>PLN02210 UDP-glucosyl transferase
Probab=88.37 E-value=9.7 Score=41.94 Aligned_cols=138 Identities=12% Similarity=0.097 Sum_probs=75.0
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEE-EeCCc-hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTGK-KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvi-vG~g~-~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
..+++..|.+... ..+.+-+.+..|...+.+|++ ++... ......+++... +++.. ...|-... .+++.+++
T Consensus 270 svvyvsfGS~~~~-~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~--~~~g~-v~~w~PQ~--~iL~h~~v 343 (456)
T PLN02210 270 SVVYISFGSMLES-LENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK--EGQGV-VLEWSPQE--KILSHMAI 343 (456)
T ss_pred ceEEEEecccccC-CHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc--CCCeE-EEecCCHH--HHhcCcCc
Confidence 3567777876532 334444444444444556655 34221 111122222221 12222 23443332 38888885
Q ss_pred EEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 481 ILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 481 ~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
..+-+. || ++++||+.+|+|+|+-...+ ....+.+ -+.|+.+.....+ ..-+.++++++|++++.+
T Consensus 344 g~FitH---~G~nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~----~~~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 344 SCFVTH---CGWNSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVD----GELKVEEVERCIEAVTEG 415 (456)
T ss_pred CeEEee---CCcccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccC----CcCCHHHHHHHHHHHhcC
Confidence 554444 55 48999999999999976433 3334444 3577765210000 124789999999999975
No 170
>PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins. These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process
Probab=88.31 E-value=2.5 Score=34.91 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=24.8
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecC
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNI 269 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~ 269 (612)
+.| |||.|...+.+..-.+.... ..|.|+|||-|++
T Consensus 50 ~I~-IVHgH~a~S~l~hE~i~hA~-----~mGlktVfTDHSL 85 (90)
T PF08288_consen 50 RID-IVHGHQAFSTLCHEAILHAR-----TMGLKTVFTDHSL 85 (90)
T ss_pred Cee-EEEeehhhhHHHHHHHHHHH-----hCCCcEEeecccc
Confidence 578 99999876665543333221 2699999999953
No 171
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=88.05 E-value=0.2 Score=46.78 Aligned_cols=80 Identities=16% Similarity=0.238 Sum_probs=47.1
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccceecCceEEEecccccccCCCCCCCHHH
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 542 (612)
+.++++.||++|. + +-+.++.|++++|+|.|.-...+. ...+.+...|..+ .-...+++.
T Consensus 66 m~~~m~~aDlvIs--~--aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~--------~~~~~~~~~ 133 (167)
T PF04101_consen 66 MAELMAAADLVIS--H--AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML--------DESELNPEE 133 (167)
T ss_dssp HHHHHHHHSEEEE--C--S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS--------ECCC-SCCC
T ss_pred HHHHHHHcCEEEe--C--CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc--------CcccCCHHH
Confidence 5679999998883 2 345799999999999988765542 1222233334432 012334688
Q ss_pred HHHHHHHHHHhhCHHHHHHHHH
Q 007224 543 VSTTVRRALATYGTQALAEMMK 564 (612)
Q Consensus 543 la~~l~~ll~~~~~~~~~~~~~ 564 (612)
|.++|..++.+ +....+|.+
T Consensus 134 L~~~i~~l~~~--~~~~~~~~~ 153 (167)
T PF04101_consen 134 LAEAIEELLSD--PEKLKEMAK 153 (167)
T ss_dssp HHHHHHCHCCC--HH-SHHHCC
T ss_pred HHHHHHHHHcC--cHHHHHHHH
Confidence 99999999887 444444433
No 172
>PLN02173 UDP-glucosyl transferase family protein
Probab=87.36 E-value=7.7 Score=42.58 Aligned_cols=137 Identities=8% Similarity=0.106 Sum_probs=72.9
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
.+++..|.... -..+.+.+.+.-|...++-.++-.+......+.+.+.. .+.++... .|-... ++++..++..+
T Consensus 266 vvyvsfGS~~~-~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~--~~~~~~i~-~W~PQ~--~iL~H~~v~~F 339 (449)
T PLN02173 266 VVYIAFGSMAK-LSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETV--DKDKSLVL-KWSPQL--QVLSNKAIGCF 339 (449)
T ss_pred eEEEEeccccc-CCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhh--cCCceEEe-CCCCHH--HHhCCCccceE
Confidence 56667787642 23345555555553334322222111111111111111 12334444 343322 38888886666
Q ss_pred CCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 484 PSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-+. || ++++||+++|+|+|+-..-+ ....+.+. +.|+-+.....+ ..-+.+++.+++++++.+
T Consensus 340 vtH---cGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~----~~~~~e~v~~av~~vm~~ 408 (449)
T PLN02173 340 MTH---CGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKES----GIAKREEIEFSIKEVMEG 408 (449)
T ss_pred Eec---CccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeecccC----CcccHHHHHHHHHHHhcC
Confidence 565 55 68999999999999986432 33444443 466654210000 012789999999999975
No 173
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=87.04 E-value=9.4 Score=42.31 Aligned_cols=134 Identities=10% Similarity=-0.012 Sum_probs=68.7
Q ss_pred CcEEEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCchh-------HHHHHHHHHHHCCCceEEEeccChHHHHH
Q 007224 403 IPVIGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKKP-------MEKQLEQLEILYPEKARGVAKFNIPLAHM 473 (612)
Q Consensus 403 ~~~il~iGrl~~--~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~-------~~~~l~~l~~~~~~~i~~~~~~~~~~~~~ 473 (612)
..+++..|.+.. .+....++++++.. +.+|+++-..+.. .-..+++... +..+....+.+.. .
T Consensus 284 svVyvsfGS~~~~~~~~~~ela~gL~~~---~~~flw~~~~~~~~~~~~~~lp~~~~~r~~--~~g~~v~~w~PQ~---~ 355 (477)
T PLN02863 284 KVVYVCFGSQVVLTKEQMEALASGLEKS---GVHFIWCVKEPVNEESDYSNIPSGFEDRVA--GRGLVIRGWAPQV---A 355 (477)
T ss_pred ceEEEEeeceecCCHHHHHHHHHHHHhC---CCcEEEEECCCcccccchhhCCHHHHHHhc--cCCEEecCCCCHH---H
Confidence 356677787643 22345555555544 5566555432110 1111111111 1123332333332 3
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++...+-++-+. || ++.+||+++|+|+|+-...+ ....+.+ -+.|+-+... +- ...+.+++.+++
T Consensus 356 vL~h~~v~~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~--~~---~~~~~~~v~~~v 427 (477)
T PLN02863 356 ILSHRAVGAFLTH---CGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEG--AD---TVPDSDELARVF 427 (477)
T ss_pred HhcCCCcCeEEec---CCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccC--CC---CCcCHHHHHHHH
Confidence 7777544444344 44 58999999999999975432 3333333 2567654110 00 123678999999
Q ss_pred HHHHH
Q 007224 548 RRALA 552 (612)
Q Consensus 548 ~~ll~ 552 (612)
.+++.
T Consensus 428 ~~~m~ 432 (477)
T PLN02863 428 MESVS 432 (477)
T ss_pred HHHhh
Confidence 98884
No 174
>PLN02208 glycosyltransferase family protein
Probab=86.96 E-value=17 Score=39.80 Aligned_cols=73 Identities=7% Similarity=0.043 Sum_probs=49.2
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++...+-++-+. || ++++||+++|+|+|+-..-+ ....+.+ -+.|+.+.... + ..-+.+++.++|
T Consensus 324 iL~H~~v~~FvtH---cG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~-~----~~~~~~~l~~ai 395 (442)
T PLN02208 324 ILDHPSIGCFVNH---CGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK-T----GWFSKESLSNAI 395 (442)
T ss_pred HhcCCccCeEEcc---CCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc-C----CcCcHHHHHHHH
Confidence 7888887666665 66 58999999999999975432 3333333 35676552100 0 014789999999
Q ss_pred HHHHHhh
Q 007224 548 RRALATY 554 (612)
Q Consensus 548 ~~ll~~~ 554 (612)
++++++.
T Consensus 396 ~~~m~~~ 402 (442)
T PLN02208 396 KSVMDKD 402 (442)
T ss_pred HHHhcCC
Confidence 9999763
No 175
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=86.52 E-value=25 Score=36.12 Aligned_cols=100 Identities=14% Similarity=0.002 Sum_probs=59.5
Q ss_pred cEEEEEcCcc---cccCHHHHHHHHHhcccC-CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 404 PVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 404 ~~il~iGrl~---~~Kg~d~ll~a~~~l~~~-~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
+.|++.-|-. ..+..+.+.+++..+.+. +.+++++.-....-.+..+++..+.+.........+.++.-.++++||
T Consensus 173 ~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~~~~ 252 (298)
T TIGR03609 173 PVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQDLPLARALRDQLLGPAEVLSPLDPEELLGLFASAR 252 (298)
T ss_pred CeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchhHHHHHHHHHhcCCCcEEEecCCHHHHHHHHhhCC
Confidence 4565554431 122355777778877653 777766654322223445556555443222223335556667999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
++|-... -..+=|+.+|+|+|+-+
T Consensus 253 ~vI~~Rl-----H~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 253 LVIGMRL-----HALILAAAAGVPFVALS 276 (298)
T ss_pred EEEEech-----HHHHHHHHcCCCEEEee
Confidence 8885554 25666999999999765
No 176
>PLN02167 UDP-glycosyltransferase family protein
Probab=86.26 E-value=13 Score=41.30 Aligned_cols=75 Identities=16% Similarity=0.066 Sum_probs=45.1
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----ccc-ceecCceEEEecccc-cccCCCCCCCHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVD-TVEEGFTGFQMGSFS-VDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e-~v~~g~~G~l~~~~~-~~~~~v~~~d~~~la~~ 546 (612)
+++...+-.+-+. || ++.+||+++|+|+|+-...+ ... ++..-+.|+.+.... .+- -...+.++++++
T Consensus 353 iL~h~~vg~fvtH---~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~--~~~~~~~~l~~a 427 (475)
T PLN02167 353 ILAHKAIGGFVSH---CGWNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAY--GEIVKADEIAGA 427 (475)
T ss_pred HhcCcccCeEEee---CCcccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeeccccccc--CCcccHHHHHHH
Confidence 7877654333333 55 48999999999999886432 221 233445576551100 000 012368999999
Q ss_pred HHHHHHh
Q 007224 547 VRRALAT 553 (612)
Q Consensus 547 l~~ll~~ 553 (612)
|++++.+
T Consensus 428 v~~~m~~ 434 (475)
T PLN02167 428 VRSLMDG 434 (475)
T ss_pred HHHHhcC
Confidence 9999965
No 177
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=86.22 E-value=16 Score=38.41 Aligned_cols=98 Identities=20% Similarity=0.183 Sum_probs=68.9
Q ss_pred cEEEEEc-CcccccCHH--HHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 404 PVIGFIG-RLEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 404 ~~il~iG-rl~~~Kg~d--~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
.+++..| .-...|.+. .+.+.++.+.....+++++|... .++..+++...+++.+...+..+-.++..+++.||+
T Consensus 177 ~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~--e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 177 YIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD--EEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred eEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH--HHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 3555567 555677644 77788888877679999999873 577778888777643333444455667779999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+|.+.. | ..-=|.+.|+|+|+--
T Consensus 255 ~I~~DS----g-~~HlAaA~~~P~I~iy 277 (334)
T COG0859 255 VIGNDS----G-PMHLAAALGTPTIALY 277 (334)
T ss_pred EEccCC----h-HHHHHHHcCCCEEEEE
Confidence 996543 2 2333788999999975
No 178
>PLN02207 UDP-glycosyltransferase
Probab=85.24 E-value=22 Score=39.35 Aligned_cols=139 Identities=11% Similarity=0.031 Sum_probs=72.5
Q ss_pred CcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCchh-HHHHH-HHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKP-MEKQL-EQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~il~iGrl~--~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~-~~~~l-~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
..+.+..|.+. ..+-...++.+++.+ +.+|+++=..+.. ..+.+ +.+.++.+++.... .|-... ++++..
T Consensus 276 sVVyvSfGS~~~~~~~q~~ela~~l~~~---~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~-~W~PQ~--~IL~H~ 349 (468)
T PLN02207 276 SVVFLCFGSMGRLRGPLVKEIAHGLELC---QYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMIC-GWSPQV--EILAHK 349 (468)
T ss_pred cEEEEEeccCcCCCHHHHHHHHHHHHHC---CCcEEEEEeCCCccccccCCHHHHhhcCCCeEEE-EeCCHH--HHhccc
Confidence 35666678754 233455666666655 3355543322110 00000 12222223334323 443332 278887
Q ss_pred CEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEeccc-ccccCCCCCCCHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSF-SVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 479 di~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~-~~~~~~v~~~d~~~la~~l~~ll 551 (612)
.+..+-+. || ++.+||+.+|+|+|+-...+ ....+.+ -+.|+-++.. ..+. -+.-+.+++.++|++++
T Consensus 350 ~vg~FvTH---~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~--~~~v~~e~i~~av~~vm 424 (468)
T PLN02207 350 AVGGFVSH---CGWNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHS--DEIVNANEIETAIRCVM 424 (468)
T ss_pred ccceeeec---CccccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEEeccccccc--CCcccHHHHHHHHHHHH
Confidence 77555454 55 47999999999999986433 3333222 3456643110 0000 01237789999999999
Q ss_pred H
Q 007224 552 A 552 (612)
Q Consensus 552 ~ 552 (612)
.
T Consensus 425 ~ 425 (468)
T PLN02207 425 N 425 (468)
T ss_pred h
Confidence 6
No 179
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=84.94 E-value=17 Score=40.07 Aligned_cols=137 Identities=12% Similarity=0.110 Sum_probs=75.2
Q ss_pred CcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEE-EeCCc-------hhHH---HHHHHHHHHCCCceEEEeccChH
Q 007224 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIV-LGTGK-------KPME---KQLEQLEILYPEKARGVAKFNIP 469 (612)
Q Consensus 403 ~~~il~iGrl~--~~Kg~d~ll~a~~~l~~~~~~lvi-vG~g~-------~~~~---~~l~~l~~~~~~~i~~~~~~~~~ 469 (612)
..+++..|.+. +.+-.+.+..+++.... +|++ +.+.. .... ...+.+.++.+++.... .|-..
T Consensus 262 sVvyvsfGS~~~l~~~q~~ela~gL~~s~~---~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~-~W~PQ 337 (455)
T PLN02152 262 SVIYVSFGTMVELSKKQIEELARALIEGKR---PFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIV-SWCSQ 337 (455)
T ss_pred ceEEEEecccccCCHHHHHHHHHHHHHcCC---CeEEEEecCcccccccccccccccccchhHHHhccCCeEEE-eeCCH
Confidence 45666678764 35556667777776632 4444 33210 0000 01123333333333333 44332
Q ss_pred HHHHHHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHH
Q 007224 470 LAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 470 ~~~~~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~l 543 (612)
. ++++..++-++-+. || ++++||+.+|+|+|+-...+ ....+.+. +.|+-+... .+ +..+.+++
T Consensus 338 ~--~iL~h~~vg~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~-~~----~~~~~e~l 407 (455)
T PLN02152 338 I--EVLRHRAVGCFVTH---CGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVREN-SE----GLVERGEI 407 (455)
T ss_pred H--HHhCCcccceEEee---CCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecC-cC----CcCcHHHH
Confidence 2 38888887666555 44 58999999999999975432 33333331 245543100 00 12378999
Q ss_pred HHHHHHHHHh
Q 007224 544 STTVRRALAT 553 (612)
Q Consensus 544 a~~l~~ll~~ 553 (612)
+++|++++.+
T Consensus 408 ~~av~~vm~~ 417 (455)
T PLN02152 408 RRCLEAVMEE 417 (455)
T ss_pred HHHHHHHHhh
Confidence 9999999975
No 180
>PLN02764 glycosyltransferase family protein
Probab=84.88 E-value=24 Score=38.80 Aligned_cols=72 Identities=7% Similarity=0.069 Sum_probs=46.9
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceec-CceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEE-GFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++...+..+-+. || ++.+||+.+|+|+|+-...+ ....+.+ -+.|+.+... +. ..-+.+++.++|
T Consensus 330 vL~h~~v~~FvtH---~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~--~~---~~~~~e~i~~av 401 (453)
T PLN02764 330 ILSHPSVGCFVSH---CGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVARE--ET---GWFSKESLRDAI 401 (453)
T ss_pred HhcCcccCeEEec---CCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccc--cC---CccCHHHHHHHH
Confidence 7887666444444 54 68999999999999986543 3334432 3456643100 00 124789999999
Q ss_pred HHHHHh
Q 007224 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
++++.+
T Consensus 402 ~~vm~~ 407 (453)
T PLN02764 402 NSVMKR 407 (453)
T ss_pred HHHhcC
Confidence 999976
No 181
>PLN02554 UDP-glycosyltransferase family protein
Probab=84.43 E-value=19 Score=40.03 Aligned_cols=76 Identities=14% Similarity=0.184 Sum_probs=45.0
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cc-cceecCceEEEeccc-cccc--CCCCCCCHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LV-DTVEEGFTGFQMGSF-SVDC--EAVDPVDVAAVS 544 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~-e~v~~g~~G~l~~~~-~~~~--~~v~~~d~~~la 544 (612)
+++...+-.+-+. || ++++||+.+|+|+|+-...+ .. ..++.-+.|+.+... ..+. ..-..-+.+++.
T Consensus 355 iL~H~~v~~FvtH---~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~ 431 (481)
T PLN02554 355 VLAKPAIGGFVTH---CGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIE 431 (481)
T ss_pred HhCCcccCccccc---CccchHHHHHHcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHH
Confidence 7755555444344 55 58999999999999986432 22 234444557655210 0000 000123789999
Q ss_pred HHHHHHHH
Q 007224 545 TTVRRALA 552 (612)
Q Consensus 545 ~~l~~ll~ 552 (612)
++|++++.
T Consensus 432 ~av~~vm~ 439 (481)
T PLN02554 432 RGIRCLME 439 (481)
T ss_pred HHHHHHhc
Confidence 99999996
No 182
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=84.30 E-value=18 Score=40.17 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=47.4
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccce-ecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++...+..+-+. || ++.+||+.+|+|+|+-...+ ....+ ..-+.|..+... + ..-+.++++++|
T Consensus 351 iL~h~~vg~FitH---~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~--~----~~~~~~~l~~av 421 (481)
T PLN02992 351 ILAHQAVGGFLTH---CGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP--K----EVISRSKIEALV 421 (481)
T ss_pred HhCCcccCeeEec---CchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC--C----CcccHHHHHHHH
Confidence 7888887554444 55 58999999999999986443 33344 233456654100 0 124789999999
Q ss_pred HHHHHh
Q 007224 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
.+++.+
T Consensus 422 ~~vm~~ 427 (481)
T PLN02992 422 RKVMVE 427 (481)
T ss_pred HHHhcC
Confidence 999965
No 183
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=83.94 E-value=11 Score=39.67 Aligned_cols=110 Identities=15% Similarity=0.097 Sum_probs=63.7
Q ss_pred HHHHhCCCCCCCCcEEEEEcC-cccccCH--HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCC----ceEEE
Q 007224 391 LQAEVGLPVDRNIPVIGFIGR-LEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE----KARGV 463 (612)
Q Consensus 391 l~~~~gl~~~~~~~~il~iGr-l~~~Kg~--d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~----~i~~~ 463 (612)
+.+.+++..+ +..+++..|. ..+.|.+ +.+.+.++.+.+.+++++++|... .++..+++....+. ++...
T Consensus 170 ~~~~~~~~~~-~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~--e~~~~~~i~~~~~~~~~~~~~~l 246 (348)
T PRK10916 170 TCAAFSLSSE-RPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWCRNL 246 (348)
T ss_pred HHHHcCCCCC-CCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHH--hHHHHHHHHHhcccccccceeec
Confidence 4444554211 2234455654 3456654 456777777755678999998654 23344444443321 12222
Q ss_pred -eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 464 -AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 464 -~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+..+-.++..+++.||++|-.-. ..+-=|.+.|+|+|+--
T Consensus 247 ~g~~sL~el~ali~~a~l~I~nDT-----Gp~HlAaA~g~P~valf 287 (348)
T PRK10916 247 AGETQLEQAVILIAACKAIVTNDS-----GLMHVAAALNRPLVALY 287 (348)
T ss_pred cCCCCHHHHHHHHHhCCEEEecCC-----hHHHHHHHhCCCEEEEE
Confidence 23355566679999999995432 22333788999999764
No 184
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=83.17 E-value=5.5 Score=40.40 Aligned_cols=101 Identities=15% Similarity=0.130 Sum_probs=58.8
Q ss_pred CCCcEEEEEcCcccc-------cCHHHHHHHHHhccc--CCcEEEEEeCCch---hHHHHHHHHHHHCCCceEEEeccCh
Q 007224 401 RNIPVIGFIGRLEEQ-------KGSDILAAAIPHFIK--ENVQIIVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNI 468 (612)
Q Consensus 401 ~~~~~il~iGrl~~~-------Kg~d~ll~a~~~l~~--~~~~lvivG~g~~---~~~~~l~~l~~~~~~~i~~~~~~~~ 468 (612)
.+++.|++....... .....+++.+..+.+ |+.+++|-=.... .....+.++.. ... +.... ..
T Consensus 115 ~~~~~vlv~lQ~~~D~~i~~~~~~~~~~~~~l~~~~~~~p~~~lvvK~HP~~~~~~~~~~~~~~~~-~~~-~~~~~--~~ 190 (269)
T PF05159_consen 115 KNKKYVLVPLQVENDSQIRYHSPSQADFLDMLESFAKENPDAKLVVKPHPDERGGNKYSYLEELPN-LPN-VVIID--DD 190 (269)
T ss_pred CCCCEEEEEeeCCcCcchhccCCcHhHHHHHHHHHHHHCCCCEEEEEECchhhCCCChhHhhhhhc-CCC-eEEEC--CC
Confidence 456788888777654 234455555555544 5788877544311 11122332222 121 22221 22
Q ss_pred HHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC
Q 007224 469 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 510 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g 510 (612)
--..+++..||.++.- .+.+.+||+.+|+|||+....
T Consensus 191 ~~~~~Ll~~s~~Vvti-----nStvGlEAll~gkpVi~~G~~ 227 (269)
T PF05159_consen 191 VNLYELLEQSDAVVTI-----NSTVGLEALLHGKPVIVFGRA 227 (269)
T ss_pred CCHHHHHHhCCEEEEE-----CCHHHHHHHHcCCceEEecCc
Confidence 2345689999998853 467999999999999997543
No 185
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=81.80 E-value=1.6 Score=42.11 Aligned_cols=38 Identities=29% Similarity=0.393 Sum_probs=29.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
||||+.+..- =.+.-+..|.++|.+.||+|+|++|...
T Consensus 1 M~ILlTNDDG-------i~a~Gi~aL~~~L~~~g~~V~VvAP~~~ 38 (196)
T PF01975_consen 1 MRILLTNDDG-------IDAPGIRALAKALSALGHDVVVVAPDSE 38 (196)
T ss_dssp SEEEEE-SS--------TTSHHHHHHHHHHTTTSSEEEEEEESSS
T ss_pred CeEEEEcCCC-------CCCHHHHHHHHHHHhcCCeEEEEeCCCC
Confidence 8999999751 1233578899999888899999999854
No 186
>PLN00414 glycosyltransferase family protein
Probab=81.77 E-value=28 Score=38.19 Aligned_cols=72 Identities=8% Similarity=0.045 Sum_probs=47.9
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----ccccee-cCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++.+.+..+-+. || ++.+||+.+|+|+|+-...+ ....+. +-+.|+.+... .+ ..-+.+++.+++
T Consensus 325 vL~h~~v~~fvtH---~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~-~~----~~~~~~~i~~~v 396 (446)
T PLN00414 325 ILSHPSVGCFVNH---CGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQRE-DS----GWFSKESLRDTV 396 (446)
T ss_pred HhcCCccceEEec---CchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccc-cC----CccCHHHHHHHH
Confidence 7888865444344 55 58999999999999986432 334443 34667665210 00 024789999999
Q ss_pred HHHHHh
Q 007224 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
++++.+
T Consensus 397 ~~~m~~ 402 (446)
T PLN00414 397 KSVMDK 402 (446)
T ss_pred HHHhcC
Confidence 999976
No 187
>PLN02555 limonoid glucosyltransferase
Probab=81.75 E-value=16 Score=40.43 Aligned_cols=74 Identities=14% Similarity=0.142 Sum_probs=45.1
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++...+-.+-+. || ++.+||+.+|+|+|+-..-+ ....+.+. +.|+-++....+- ..-+.+++.++|
T Consensus 350 iL~H~~v~~FvtH---~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~---~~v~~~~v~~~v 423 (480)
T PLN02555 350 VLAHPSVACFVTH---CGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAEN---KLITREEVAECL 423 (480)
T ss_pred HhCCCccCeEEec---CCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCCcccc---CcCcHHHHHHHH
Confidence 6755444333333 44 58999999999999986432 33344444 5677652100000 123678999999
Q ss_pred HHHHHh
Q 007224 548 RRALAT 553 (612)
Q Consensus 548 ~~ll~~ 553 (612)
++++.+
T Consensus 424 ~~vm~~ 429 (480)
T PLN02555 424 LEATVG 429 (480)
T ss_pred HHHhcC
Confidence 999965
No 188
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=78.66 E-value=2.8 Score=37.00 Aligned_cols=40 Identities=25% Similarity=0.279 Sum_probs=25.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+|+-. |.....=..+-...|+.+.+++||+|.++.+.
T Consensus 1 Mki~fvmD---pi~~i~~~kDTT~alm~eAq~RGhev~~~~~~ 40 (119)
T PF02951_consen 1 MKIAFVMD---PIESIKPYKDTTFALMLEAQRRGHEVFYYEPG 40 (119)
T ss_dssp -EEEEEES----GGG--TTT-HHHHHHHHHHHTT-EEEEE-GG
T ss_pred CeEEEEeC---CHHHCCCCCChHHHHHHHHHHCCCEEEEEEcC
Confidence 89999986 32111122345677999999999999999886
No 189
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=78.62 E-value=16 Score=37.99 Aligned_cols=99 Identities=11% Similarity=0.081 Sum_probs=60.6
Q ss_pred EEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 405 VIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~il~iGrl~~~Kg~--d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
+++..|.-.+.|.+ +.+.+.+..+.+.+.++++.|.++. .++..+++....+ .+...+..+-.++..+++.||++|
T Consensus 181 i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~-e~~~~~~i~~~~~-~~~l~g~~sL~elaali~~a~l~I 258 (322)
T PRK10964 181 LVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH-EEQRAKRLAEGFP-YVEVLPKLSLEQVARVLAGAKAVV 258 (322)
T ss_pred EEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH-HHHHHHHHHccCC-cceecCCCCHHHHHHHHHhCCEEE
Confidence 33344543445654 4677888877656788888633332 2344555544333 233334556666778999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCC
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTG 510 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~g 510 (612)
-.-. ..+-=|.++|+|+|+--.+
T Consensus 259 ~nDS-----Gp~HlA~A~g~p~valfGp 281 (322)
T PRK10964 259 SVDT-----GLSHLTAALDRPNITLYGP 281 (322)
T ss_pred ecCC-----cHHHHHHHhCCCEEEEECC
Confidence 6432 2334478899999987543
No 190
>KOG0780 consensus Signal recognition particle, subunit Srp54 [Intracellular trafficking, secretion, and vesicular transport]
Probab=77.84 E-value=70 Score=34.13 Aligned_cols=169 Identities=15% Similarity=0.177 Sum_probs=103.5
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc-----hhHHHHHHHHHHH-CCCceEEEeccC-----hHHHHH
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-----KPMEKQLEQLEIL-YPEKARGVAKFN-----IPLAHM 473 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~-----~~~~~~l~~l~~~-~~~~i~~~~~~~-----~~~~~~ 473 (612)
.|=|.|..++-+-+.+..+.+.+++++++.++|+-+.. ..+.+++.+..+. .|+.+.++..-. .+++..
T Consensus 156 ~iP~ygsyte~dpv~ia~egv~~fKke~fdvIIvDTSGRh~qe~sLfeEM~~v~~ai~Pd~vi~VmDasiGQaae~Qa~a 235 (483)
T KOG0780|consen 156 RVPFYGSYTEADPVKIASEGVDRFKKENFDVIIVDTSGRHKQEASLFEEMKQVSKAIKPDEIIFVMDASIGQAAEAQARA 235 (483)
T ss_pred CCeeEecccccchHHHHHHHHHHHHhcCCcEEEEeCCCchhhhHHHHHHHHHHHhhcCCCeEEEEEeccccHhHHHHHHH
Confidence 35677788999999999999999999999999998843 2344444444443 356676665432 122333
Q ss_pred HHHhcCE--EEeCCCC----CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADF--ILIPSRF----EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi--~l~pS~~----E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+=...|+ +|++-.. -|..++..+ +.++|||--.+|-..|-++.-.. .+|- -.+.--+|++.+.+.+
T Consensus 236 Fk~~vdvg~vIlTKlDGhakGGgAlSaVa--aTksPIiFIGtGEhmdDlE~F~p----k~Fv--srlLGmGDi~glvek~ 307 (483)
T KOG0780|consen 236 FKETVDVGAVILTKLDGHAKGGGALSAVA--ATKSPIIFIGTGEHMDDLEPFDP----KPFV--SRLLGMGDIEGLVEKV 307 (483)
T ss_pred HHHhhccceEEEEecccCCCCCceeeehh--hhCCCEEEEecCccccccCCCCh----HHHH--HHHhccccHHHHHHHH
Confidence 3344454 4444332 234455554 57889998887765554432100 0000 0011347888888888
Q ss_pred HHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 548 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 548 ~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
.++..+. . .++.++...-+|+...+.+++..+.+
T Consensus 308 ~ev~~~d-~---~el~~kl~~gkFtlrd~y~Qfq~imk 341 (483)
T KOG0780|consen 308 QEVGKDD-A---KELVEKLKQGKFTLRDFYDQFQNIMK 341 (483)
T ss_pred HHHhhhh-H---HHHHHHHHhCCccHHHHHHHHHHHHh
Confidence 8888331 2 23334445678999999998888775
No 191
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=76.74 E-value=5.1 Score=35.56 Aligned_cols=45 Identities=13% Similarity=0.040 Sum_probs=30.5
Q ss_pred HHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCccc
Q 007224 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 470 ~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
.+.+++..+|++|--|..+..--.+-.++.+|+|+|+--+|.-.+
T Consensus 60 ~l~~~~~~~DVvIDfT~p~~~~~~~~~~~~~g~~~ViGTTG~~~~ 104 (124)
T PF01113_consen 60 DLEELLEEADVVIDFTNPDAVYDNLEYALKHGVPLVIGTTGFSDE 104 (124)
T ss_dssp -HHHHTTH-SEEEEES-HHHHHHHHHHHHHHT-EEEEE-SSSHHH
T ss_pred hHHHhcccCCEEEEcCChHHhHHHHHHHHhCCCCEEEECCCCCHH
Confidence 456688889999987765555556777888999999988876443
No 192
>PF15024 Glyco_transf_18: Glycosyltransferase family 18
Probab=74.32 E-value=24 Score=39.38 Aligned_cols=161 Identities=14% Similarity=0.088 Sum_probs=100.4
Q ss_pred cEEEEEcCc-ccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~iGrl-~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
..-+..|.- .-+||-+..++++.+. -.++-.|.+... ... ..+..|..++..++.+..++++.+.++|
T Consensus 278 ~~AlVyGK~~~~w~~k~~~l~~l~~~--~eih~tV~~~~~--~~~-------~~P~~V~NHG~l~~~ef~~lL~~akvfi 346 (559)
T PF15024_consen 278 NQALVYGKERYMWKGKEKYLDVLHKY--MEIHGTVYDEPQ--RPP-------NVPSFVKNHGILSGDEFQQLLRKAKVFI 346 (559)
T ss_pred ceeEEEccchhhhcCcHHHHHHHHhh--cEEEEEeccCCC--CCc-------ccchhhhhcCcCCHHHHHHHHHhhhEee
Confidence 445555654 3478889999988776 345555544432 011 1222355566778888999999999999
Q ss_pred eCCC-CCCCcHHHHHHHHcCCceEEcCCCCc-----ccceecCce-----------EEEecccccccCCCCCCCHHHHHH
Q 007224 483 IPSR-FEPCGLIQLHAMRYGTVPIVASTGGL-----VDTVEEGFT-----------GFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 483 ~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~-----~e~v~~g~~-----------G~l~~~~~~~~~~v~~~d~~~la~ 545 (612)
=... +| |-+.+||+++|+|.|-...... .+...+.-+ --.+|...| -.||-+|.+++-+
T Consensus 347 GlGfP~E--gPaPlEAia~G~vFlNp~~~pp~s~~n~~ff~~KPt~r~~~SQhPY~e~~iG~PhV--ytVd~~n~~~v~~ 422 (559)
T PF15024_consen 347 GLGFPYE--GPAPLEAIANGCVFLNPRFNPPHSRLNTEFFKGKPTLREWTSQHPYAEEFIGEPHV--YTVDINNSTEVEA 422 (559)
T ss_pred ecCCCCC--CCChHHHHHcCCccccccCCCCCcccccccccCCCCcceeccCChHHHhhCCCCeE--EEEcCCCHHHHHH
Confidence 5432 23 4578999999999998764321 111111100 001121111 1568999999999
Q ss_pred HHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 007224 546 TVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 546 ~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l 587 (612)
+|++++++.-.+ -+--+||-+.+.+++..+++.-
T Consensus 423 Avk~il~~~v~P--------y~P~efT~egmLeRv~~~ie~q 456 (559)
T PF15024_consen 423 AVKAILATPVEP--------YLPYEFTCEGMLERVNALIEKQ 456 (559)
T ss_pred HHHHHHhcCCCC--------cCCcccCHHHHHHHHHHHHHhh
Confidence 999999973211 1335788888888887777653
No 193
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=70.94 E-value=34 Score=32.72 Aligned_cols=40 Identities=15% Similarity=0.067 Sum_probs=28.0
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeC
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N 356 (612)
-.+.+..+...|.|++.|+..++.+.+ .|++.+ ++.+..|
T Consensus 140 ~~~~r~~l~~f~~i~aqs~~da~r~~~---lG~~~~------~v~v~Gn 179 (186)
T PF04413_consen 140 PFLFRPLLSRFDRILAQSEADAERFRK---LGAPPE------RVHVTGN 179 (186)
T ss_dssp -HHHHHHGGG-SEEEESSHHHHHHHHT---TT-S--------SEEE---
T ss_pred HHHHHHHHHhCCEEEECCHHHHHHHHH---cCCCcc------eEEEeCc
Confidence 346778888999999999999999997 888766 7777765
No 194
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=70.84 E-value=6.1 Score=37.52 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=27.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++|+.+ |-+| ..+.++..++||+|+.|+..
T Consensus 1 mKIaiIgAs-------G~~G---s~i~~EA~~RGHeVTAivRn 33 (211)
T COG2910 1 MKIAIIGAS-------GKAG---SRILKEALKRGHEVTAIVRN 33 (211)
T ss_pred CeEEEEecC-------chhH---HHHHHHHHhCCCeeEEEEeC
Confidence 899999874 4444 55788899999999999876
No 195
>PRK00207 sulfur transfer complex subunit TusD; Validated
Probab=70.60 E-value=7.7 Score=34.71 Aligned_cols=40 Identities=15% Similarity=0.131 Sum_probs=31.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeE-EEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V-~vit~~ 127 (612)
|||+++... +|+ .+-.++-...++.++.+.||+| .|+-..
T Consensus 1 m~~~iv~~~-~Py--~~~~~~~al~~A~aa~~~gh~v~~vFf~~ 41 (128)
T PRK00207 1 MRYAIAVTG-PAY--GTQQASSAYQFAQALLAEGHELVSVFFYQ 41 (128)
T ss_pred CEEEEEEcC-CCC--CCHHHHHHHHHHHHHHhCCCCeeEEEEeh
Confidence 899998876 675 5566677888999999999994 666543
No 196
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=70.28 E-value=6.1 Score=35.21 Aligned_cols=22 Identities=32% Similarity=0.382 Sum_probs=17.7
Q ss_pred HhhhhHHHHHhCCCeEEEEeec
Q 007224 106 VLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 106 ~~~~La~~L~~~Gh~V~vit~~ 127 (612)
=...|+++|.++||+|.+.++.
T Consensus 14 P~lala~~L~~rGh~V~~~~~~ 35 (139)
T PF03033_consen 14 PFLALARALRRRGHEVRLATPP 35 (139)
T ss_dssp HHHHHHHHHHHTT-EEEEEETG
T ss_pred HHHHHHHHHhccCCeEEEeecc
Confidence 4456899999999999988875
No 197
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=65.76 E-value=8.2 Score=40.14 Aligned_cols=35 Identities=26% Similarity=0.284 Sum_probs=27.5
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|..|||++|+ .|++|. .++..|++.||+|++++..
T Consensus 3 ~~~m~I~IiG--------~GaiG~---~lA~~L~~~g~~V~~~~r~ 37 (313)
T PRK06249 3 SETPRIGIIG--------TGAIGG---FYGAMLARAGFDVHFLLRS 37 (313)
T ss_pred CcCcEEEEEC--------CCHHHH---HHHHHHHHCCCeEEEEEeC
Confidence 4569999996 477774 4666799999999999865
No 198
>PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses []. Mutations in two homologous genes, EXT1 and EXT2, are responsible for the EXT syndrome. The human and mouse EXT genes have at least two homologs in the invertebrate Caenorhabditis elegans, indicating that they do not function exclusively as regulators of bone growth. EXT1 and EXT2 have both been shown to encode glycosyltransferases involved in the chain elongation step of heparan sulphate biosynthesis [].; GO: 0016020 membrane
Probab=64.33 E-value=22 Score=36.28 Aligned_cols=69 Identities=16% Similarity=0.246 Sum_probs=49.0
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC---CCcccceecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST---GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~---gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
..+.|+.+.+.++|.-..++..-++|||++||.+|.... -...|++.=..-.+.+ +..++.+|.+.|
T Consensus 230 ~~~~l~~S~FCL~p~G~~~~s~Rl~eal~~GcIPVii~d~~~lPf~~~ldw~~fsv~v----------~~~~~~~l~~iL 299 (302)
T PF03016_consen 230 YMELLRNSKFCLCPRGDGPWSRRLYEALAAGCIPVIISDDYVLPFEDVLDWSRFSVRV----------PEADLPELPEIL 299 (302)
T ss_pred HHHhcccCeEEEECCCCCcccchHHHHhhhceeeEEecCcccCCcccccCHHHEEEEE----------CHHHHHHHHHHH
Confidence 456899999999988777788999999999997776542 2355566434445544 777776666665
Q ss_pred HH
Q 007224 548 RR 549 (612)
Q Consensus 548 ~~ 549 (612)
+.
T Consensus 300 ~~ 301 (302)
T PF03016_consen 300 RS 301 (302)
T ss_pred hc
Confidence 43
No 199
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=63.33 E-value=38 Score=32.09 Aligned_cols=98 Identities=18% Similarity=0.221 Sum_probs=61.6
Q ss_pred CHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCC-ceEEE-eccChHHHHH---HH--HhcCEEEeCC---C
Q 007224 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGV-AKFNIPLAHM---II--AGADFILIPS---R 486 (612)
Q Consensus 417 g~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~i~~~-~~~~~~~~~~---~l--~~adi~l~pS---~ 486 (612)
|.|++.+.++.....+.++.++|..+...++..+.+.++||+ ++.+. +.|..++..+ .+ .++|++++-- +
T Consensus 33 G~dl~~~l~~~~~~~~~~vfllG~~~~v~~~~~~~l~~~yP~l~i~g~~g~f~~~~~~~i~~~I~~s~~dil~VglG~Pk 112 (177)
T TIGR00696 33 GPDLMEELCQRAGKEKLPIFLYGGKPDVLQQLKVKLIKEYPKLKIVGAFGPLEPEERKAALAKIARSGAGIVFVGLGCPK 112 (177)
T ss_pred hHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCChHHHHHHHHHHHHcCCCEEEEEcCCcH
Confidence 889999999988767899999999888888888999999985 44444 3343332222 22 4678888632 2
Q ss_pred CCCCcHHHHHHHHcCCceEEcCCCCccccee
Q 007224 487 FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 517 (612)
Q Consensus 487 ~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 517 (612)
.|-|-... ......+++ -.+||.-|+..
T Consensus 113 QE~~~~~~--~~~~~~~v~-~gvGg~fd~~a 140 (177)
T TIGR00696 113 QEIWMRNH--RHLKPDAVM-IGVGGSFDVFS 140 (177)
T ss_pred hHHHHHHh--HHhCCCcEE-EEeceeeeecc
Confidence 24332211 112233333 34777777664
No 200
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=62.99 E-value=56 Score=30.69 Aligned_cols=101 Identities=23% Similarity=0.329 Sum_probs=63.4
Q ss_pred cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCC-ceEE-E-eccChHHHH---HHH--HhcCEEEeCC
Q 007224 414 EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARG-V-AKFNIPLAH---MII--AGADFILIPS 485 (612)
Q Consensus 414 ~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~i~~-~-~~~~~~~~~---~~l--~~adi~l~pS 485 (612)
.--|.|++-+.++...+++.++.++|..++..++..+.+.+++|+ ++.+ . +.+..+... +.+ .++|++++.-
T Consensus 28 r~~g~dl~~~ll~~~~~~~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~~~i~~~I~~~~pdiv~vgl 107 (171)
T cd06533 28 RVTGSDLMPALLELAAQKGLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGYFGPEEEEEIIERINASGADILFVGL 107 (171)
T ss_pred ccCcHHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEEC
Confidence 345899999999998778899999999888778888888888885 4444 1 233222221 222 3668888743
Q ss_pred ---CCCCCcHHHHHHHHcCCceEEcCCCCccccee
Q 007224 486 ---RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 517 (612)
Q Consensus 486 ---~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 517 (612)
..|-|.....+.+ ..+++.+ +||.-|+..
T Consensus 108 G~PkQE~~~~~~~~~l--~~~v~~~-vG~~~d~~a 139 (171)
T cd06533 108 GAPKQELWIARHKDRL--PVPVAIG-VGGSFDFLA 139 (171)
T ss_pred CCCHHHHHHHHHHHHC--CCCEEEE-eceeeEecc
Confidence 2354444444433 3444443 566666553
No 201
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=62.86 E-value=1.2e+02 Score=33.37 Aligned_cols=129 Identities=12% Similarity=0.029 Sum_probs=69.0
Q ss_pred cEEEEEcCcc-----cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC----CceEEEeccChHHHHHH
Q 007224 404 PVIGFIGRLE-----EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP----EKARGVAKFNIPLAHMI 474 (612)
Q Consensus 404 ~~il~iGrl~-----~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~----~~i~~~~~~~~~~~~~~ 474 (612)
.+++..|... +.+-...++.++..+ +++.|++.=....... +....+ .++....+.+...+ +
T Consensus 279 vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~--~~~~FiW~~~~~~~~~-----~~~~~~~~~~~nV~~~~W~PQ~~l--l 349 (496)
T KOG1192|consen 279 VVYISFGSMVNSADLPEEQKKELAKALESL--QGVTFLWKYRPDDSIY-----FPEGLPNRGRGNVVLSKWAPQNDL--L 349 (496)
T ss_pred eEEEECCcccccccCCHHHHHHHHHHHHhC--CCceEEEEecCCcchh-----hhhcCCCCCcCceEEecCCCcHHH--h
Confidence 4555567664 455566677777777 5777776655442111 222222 23544344444432 1
Q ss_pred HHhcCEEEeCCCCCCCcH-HHHHHHHcCCceEEcC----CCCccc-ceecCceEEEecccccccCCCCCCCHHHHHHHHH
Q 007224 475 IAGADFILIPSRFEPCGL-IQLHAMRYGTVPIVAS----TGGLVD-TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 475 l~~adi~l~pS~~E~~gl-~~lEAma~G~PvI~s~----~gg~~e-~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~ 548 (612)
+....+-++-+. ||+ +.+|++.+|+|+|+-. ..-... +.+++..+++. ..+..+.+ +.+++.
T Consensus 350 l~H~~v~~FvTH---gG~nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~--------~~~~~~~~-~~~~~~ 417 (496)
T KOG1192|consen 350 LDHPAVGGFVTH---GGWNSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLD--------KRDLVSEE-LLEAIK 417 (496)
T ss_pred cCCCcCcEEEEC---CcccHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEe--------hhhcCcHH-HHHHHH
Confidence 233323333333 554 5699999999999543 222333 34445555543 11233334 788888
Q ss_pred HHHHh
Q 007224 549 RALAT 553 (612)
Q Consensus 549 ~ll~~ 553 (612)
.++.+
T Consensus 418 ~il~~ 422 (496)
T KOG1192|consen 418 EILEN 422 (496)
T ss_pred HHHcC
Confidence 88775
No 202
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=59.29 E-value=1.3e+02 Score=28.24 Aligned_cols=36 Identities=19% Similarity=0.440 Sum_probs=25.6
Q ss_pred CCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEE
Q 007224 228 GEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFC 265 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~ 265 (612)
+|| +|.++...++...+++....+--+. .++|+||.
T Consensus 92 rPd-vii~nGpg~~vp~~~~~~l~~~~~~-~~~kiIyI 127 (170)
T PF08660_consen 92 RPD-VIISNGPGTCVPVCLAAKLLRLLGL-RGSKIIYI 127 (170)
T ss_pred CCC-EEEEcCCceeeHHHHHHHHHHHhhc-cCCcEEEE
Confidence 799 8999998888877776666433332 27788775
No 203
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=58.87 E-value=60 Score=30.50 Aligned_cols=100 Identities=21% Similarity=0.319 Sum_probs=63.1
Q ss_pred ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCC-ceEEE--eccChHHHHHHH-----HhcCEEEeCCC
Q 007224 415 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPE-KARGV--AKFNIPLAHMII-----AGADFILIPSR 486 (612)
Q Consensus 415 ~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~-~i~~~--~~~~~~~~~~~l-----~~adi~l~pS~ 486 (612)
--|.|++-+.+.....++.++.++|+.++..++..+.+..+||+ ++.+. +.|+.++..+++ .++|++++-.-
T Consensus 31 v~g~dl~~~l~~~~~~~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~f~~~~~~~i~~~I~~~~pdiv~vglG 110 (172)
T PF03808_consen 31 VTGSDLFPDLLRRAEQRGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGYFDEEEEEAIINRINASGPDIVFVGLG 110 (172)
T ss_pred cCHHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCCCChhhHHHHHHHHHHcCCCEEEEECC
Confidence 45889999999988778899999999887788888889999985 33322 223433433333 46788887432
Q ss_pred ---CCCCcHHHHHHHHcCCceEEcCCCCccccee
Q 007224 487 ---FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 517 (612)
Q Consensus 487 ---~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 517 (612)
.|-|-. +-....-+.|.--+||.-|+..
T Consensus 111 ~PkQE~~~~---~~~~~l~~~v~i~vG~~~d~~a 141 (172)
T PF03808_consen 111 APKQERWIA---RHRQRLPAGVIIGVGGAFDFLA 141 (172)
T ss_pred CCHHHHHHH---HHHHHCCCCEEEEECchhhhhc
Confidence 132222 2222222225666677777664
No 204
>PF03358 FMN_red: NADPH-dependent FMN reductase; InterPro: IPR005025 NADPH-dependent FMN reductase (1.5.1.29 from EC) reduces FMN and also reduces riboflavin and FAD, although more slowly. Members of this entry catalyse the reaction NAD(P)H + FMN = NAD(P)(+) + FMNH(2).; PDB: 3SVL_B 3GFS_F 3GFQ_A 1NNI_1 2GSW_B 3GFR_D 1T0I_B 3D7N_A 2R97_A 3B6K_A ....
Probab=56.47 E-value=19 Score=32.68 Aligned_cols=40 Identities=18% Similarity=0.246 Sum_probs=31.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++|..+.- +.|-....+..+...+.+.|++|.++-..
T Consensus 1 Mkilii~gS~r---~~~~t~~l~~~~~~~l~~~g~e~~~i~l~ 40 (152)
T PF03358_consen 1 MKILIINGSPR---KNSNTRKLAEAVAEQLEEAGAEVEVIDLA 40 (152)
T ss_dssp -EEEEEESSSS---TTSHHHHHHHHHHHHHHHTTEEEEEEECT
T ss_pred CEEEEEECcCC---CCCHHHHHHHHHHHHHHHcCCEEEEEecc
Confidence 89999997632 35667777778888898999999999766
No 205
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=55.97 E-value=14 Score=36.26 Aligned_cols=33 Identities=30% Similarity=0.497 Sum_probs=24.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||.+| ||.|.+-..|+..|++.||+|+++...
T Consensus 1 MkI~II----------GG~G~mG~ala~~L~~~G~~V~v~~r~ 33 (219)
T TIGR01915 1 MKIAVL----------GGTGDQGKGLALRLAKAGNKIIIGSRD 33 (219)
T ss_pred CEEEEE----------cCCCHHHHHHHHHHHhCCCEEEEEEcC
Confidence 788777 334445567899999999999887543
No 206
>PLN03015 UDP-glucosyl transferase
Probab=55.64 E-value=2.6e+02 Score=30.97 Aligned_cols=72 Identities=17% Similarity=0.170 Sum_probs=45.2
Q ss_pred HHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccce-ecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 474 IIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 474 ~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
+++...+..+-+. || ++.+||+.+|+|+|+-..-+ ....+ ..-+.|+-+.....+ ..-..++++++|
T Consensus 348 vL~h~~vg~fvtH---~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~----~~v~~e~i~~~v 420 (470)
T PLN03015 348 ILSHRSIGGFLSH---CGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSE----KVIGREEVASLV 420 (470)
T ss_pred HhccCccCeEEec---CCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccC----CccCHHHHHHHH
Confidence 6777776555454 55 58999999999999986432 22223 233456544100000 124678999999
Q ss_pred HHHHH
Q 007224 548 RRALA 552 (612)
Q Consensus 548 ~~ll~ 552 (612)
+++++
T Consensus 421 ~~lm~ 425 (470)
T PLN03015 421 RKIVA 425 (470)
T ss_pred HHHHc
Confidence 99995
No 207
>PLN00016 RNA-binding protein; Provisional
Probab=55.17 E-value=16 Score=38.92 Aligned_cols=38 Identities=26% Similarity=0.287 Sum_probs=28.2
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|||++++.. .||.|..=..|++.|.++||+|++++..
T Consensus 52 ~~~VLVt~~~------~GatG~iG~~lv~~L~~~G~~V~~l~R~ 89 (378)
T PLN00016 52 KKKVLIVNTN------SGGHAFIGFYLAKELVKAGHEVTLFTRG 89 (378)
T ss_pred cceEEEEecc------CCCceeEhHHHHHHHHHCCCEEEEEecC
Confidence 4688877544 3455544466889999999999999865
No 208
>PRK09739 hypothetical protein; Provisional
Probab=55.09 E-value=24 Score=34.01 Aligned_cols=43 Identities=16% Similarity=0.178 Sum_probs=30.4
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+.|||++|... |. ..+-....+..+..++.+.||+|+++-..
T Consensus 1 ~~mmkiliI~~s--p~-~~s~s~~l~~~~~~~~~~~g~~v~~~dL~ 43 (199)
T PRK09739 1 MQSMRIYLVWAH--PR-HDSLTAKVAEAIHQRAQERGHQVEELDLY 43 (199)
T ss_pred CCCceEEEEEcC--CC-CCCcHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 457999999976 54 22334455666778888899999988543
No 209
>PRK10037 cell division protein; Provisional
Probab=55.04 E-value=14 Score=37.04 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=26.1
Q ss_pred ceEEEEeccccCccccccHHH--HhhhhHHHHHhCCCeEEEEe
Q 007224 85 LNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~--~~~~La~~L~~~Gh~V~vit 125 (612)
|||+-|... .||+|. .+..|+.+|+++|++|.+|=
T Consensus 1 ~~~iav~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID 37 (250)
T PRK10037 1 MAILGLQGV------RGGVGTTSITAALAWSLQMLGENVLVID 37 (250)
T ss_pred CcEEEEecC------CCCccHHHHHHHHHHHHHhcCCcEEEEe
Confidence 666555543 566665 45779999999999999993
No 210
>PF06564 YhjQ: YhjQ protein; InterPro: IPR017746 The YhjQ protein is encoded immediately upstream of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae, and in several species is clearly part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm [], based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=54.44 E-value=18 Score=36.13 Aligned_cols=37 Identities=27% Similarity=0.423 Sum_probs=27.9
Q ss_pred ceEEEEeccccCccccc--cHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTG--GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~G--G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||++.|.. + .| |..+.+-.|+.+|++.|++|.+|=..
T Consensus 1 M~~iai~s---~---kGGvG~TTltAnLA~aL~~~G~~VlaID~d 39 (243)
T PF06564_consen 1 MKVIAIVS---P---KGGVGKTTLTANLAWALARLGESVLAIDLD 39 (243)
T ss_pred CcEEEEec---C---CCCCCHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 77666664 2 34 55567888999999999999999543
No 211
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=53.58 E-value=1.4e+02 Score=29.03 Aligned_cols=106 Identities=15% Similarity=0.095 Sum_probs=63.7
Q ss_pred EEEEcCccc--ccCHHHHHHHHHhcccCCcEEEEEeCCch---hHHHHHHHHHHHC-CCceEEEeccChHHHHHHHHhcC
Q 007224 406 IGFIGRLEE--QKGSDILAAAIPHFIKENVQIIVLGTGKK---PMEKQLEQLEILY-PEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 406 il~iGrl~~--~Kg~d~ll~a~~~l~~~~~~lvivG~g~~---~~~~~l~~l~~~~-~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
++.-|.... .-+.+.+.+.+.++.+++.+++++.+... ++...+.+.-.++ +-.+.....++.+...+.+..||
T Consensus 3 ~~igg~~~~~~~~~~~~l~~~l~~~~~~~~~i~~IptAs~~~~~~~~~~~~a~~~l~G~~~~~~~~~~~~~~~~~l~~ad 82 (212)
T cd03146 3 LLTSGGGLGYLAHALPAIDDLLLSLTKARPKVLFVPTASGDRDEYTARFYAAFESLRGVEVSHLHLFDTEDPLDALLEAD 82 (212)
T ss_pred EEEeCCcccccccchHHHHHHHHHhccCCCeEEEECCCCCCHHHHHHHHHHHHhhccCcEEEEEeccCcccHHHHHhcCC
Confidence 334444333 44667777777777666789999998653 3333444444445 43333333233344456899999
Q ss_pred EEEeCCC--------CCCCcH--HHHHHHHcCCceEEcCCCC
Q 007224 480 FILIPSR--------FEPCGL--IQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 480 i~l~pS~--------~E~~gl--~~lEAma~G~PvI~s~~gg 511 (612)
++++|-= +...++ .+-++...|+|++.++.|.
T Consensus 83 ~I~l~GG~~~~~~~~l~~~~l~~~l~~~~~~g~~i~G~SAGa 124 (212)
T cd03146 83 VIYVGGGNTFNLLAQWREHGLDAILKAALERGVVYIGWSAGS 124 (212)
T ss_pred EEEECCchHHHHHHHHHHcCHHHHHHHHHHCCCEEEEECHhH
Confidence 9999851 122233 3445566799999998765
No 212
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=53.49 E-value=14 Score=38.45 Aligned_cols=36 Identities=36% Similarity=0.646 Sum_probs=26.5
Q ss_pred ceEEEEeccccCccccccHHHHhh--hhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLG--GLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~--~La~~L~~~Gh~V~vit~~ 127 (612)
|||+|++. .||+|.-+. .+|..++++|++|.+++..
T Consensus 1 ~r~~~~~G-------KGGVGKTT~aaA~A~~~A~~G~rtLlvS~D 38 (305)
T PF02374_consen 1 MRILFFGG-------KGGVGKTTVAAALALALARRGKRTLLVSTD 38 (305)
T ss_dssp -SEEEEEE-------STTSSHHHHHHHHHHHHHHTTS-EEEEESS
T ss_pred CeEEEEec-------CCCCCcHHHHHHHHHHHhhCCCCeeEeecC
Confidence 89999986 366665554 4888889999999999865
No 213
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=53.11 E-value=18 Score=37.37 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=28.1
Q ss_pred CCCceEEEEeccccCccccccHH--HHhhhhHHHHHhCCCeEEEEe
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit 125 (612)
|.+|||+-|+ . .||+| +.+..|+.+|++.|++|.+|=
T Consensus 1 ~~~~~~iai~-~------KGGvGKTt~~~nLa~~la~~g~kVLliD 39 (295)
T PRK13234 1 MSKLRQIAFY-G------KGGIGKSTTSQNTLAALVEMGQKILIVG 39 (295)
T ss_pred CCcceEEEEE-C------CCCccHHHHHHHHHHHHHHCCCeEEEEe
Confidence 4678877664 2 46655 456789999999999999994
No 214
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=51.52 E-value=57 Score=30.72 Aligned_cols=81 Identities=20% Similarity=0.274 Sum_probs=47.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChH------------HHHHHHHhcCEEEeC--CCCCC---CcHHH
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP------------LAHMIIAGADFILIP--SRFEP---CGLIQ 494 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~------------~~~~~l~~adi~l~p--S~~E~---~gl~~ 494 (612)
+-++-|+|-|. .-+.+.++.+.++-++...-....+ .+.++++.||++++. ..-|+ ++-..
T Consensus 36 g~tvgIiG~G~--IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~~~l~ell~~aDiv~~~~plt~~T~~li~~~~ 113 (178)
T PF02826_consen 36 GKTVGIIGYGR--IGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEYVSLDELLAQADIVSLHLPLTPETRGLINAEF 113 (178)
T ss_dssp TSEEEEESTSH--HHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEESSHHHHHHH-SEEEE-SSSSTTTTTSBSHHH
T ss_pred CCEEEEEEEcC--CcCeEeeeeecCCceeEEecccCChhhhcccccceeeehhhhcchhhhhhhhhccccccceeeeeee
Confidence 44555555555 4444444444454444444433222 234689999999874 33344 55678
Q ss_pred HHHHHcCCceEEcCCCCccc
Q 007224 495 LHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 495 lEAma~G~PvI~s~~gg~~e 514 (612)
++.|--|.-+|-+.-|++.|
T Consensus 114 l~~mk~ga~lvN~aRG~~vd 133 (178)
T PF02826_consen 114 LAKMKPGAVLVNVARGELVD 133 (178)
T ss_dssp HHTSTTTEEEEESSSGGGB-
T ss_pred eeccccceEEEeccchhhhh
Confidence 99999999888888776554
No 215
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=51.50 E-value=25 Score=33.73 Aligned_cols=40 Identities=18% Similarity=0.331 Sum_probs=30.0
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
..||++.|+..- + .-|....+..|+.+|+++|++|.+|=.
T Consensus 15 ~~~kvI~v~s~k-g---G~GKTt~a~~LA~~la~~G~rVllID~ 54 (204)
T TIGR01007 15 AEIKVLLITSVK-P---GEGKSTTSANIAVAFAQAGYKTLLIDG 54 (204)
T ss_pred CCCcEEEEecCC-C---CCCHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 347887777541 1 336677889999999999999988843
No 216
>PRK03692 putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Provisional
Probab=51.15 E-value=62 Score=32.39 Aligned_cols=98 Identities=16% Similarity=0.204 Sum_probs=61.5
Q ss_pred CHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEE--EeccChHHHHHHH-----HhcCEEEeCC---C
Q 007224 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARG--VAKFNIPLAHMII-----AGADFILIPS---R 486 (612)
Q Consensus 417 g~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~--~~~~~~~~~~~~l-----~~adi~l~pS---~ 486 (612)
|.|++.+.++.....+.++.++|..+...++..+.+.++++.++.+ .+.|..++..++. .++|++++-- +
T Consensus 90 G~dl~~~ll~~~~~~~~~v~llG~~~~v~~~a~~~l~~~y~l~i~g~~~Gyf~~~e~~~i~~~I~~s~~dil~VglG~Pk 169 (243)
T PRK03692 90 GADLWEALMARAGKEGTPVFLVGGKPEVLAQTEAKLRTQWNVNIVGSQDGYFTPEQRQALFERIHASGAKIVTVAMGSPK 169 (243)
T ss_pred hHHHHHHHHHHHHhcCCeEEEECCCHHHHHHHHHHHHHHhCCEEEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEECCCcH
Confidence 8999999888876667999999998877788888888888545543 2345433322222 4678888742 3
Q ss_pred CCCCcHHHHHHHHcCCceEEcCCCCccccee
Q 007224 487 FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 517 (612)
Q Consensus 487 ~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 517 (612)
.|-|-....+ ..+.+++ --+||.-|+..
T Consensus 170 QE~~~~~~~~--~~~~~v~-~gvGg~fD~~a 197 (243)
T PRK03692 170 QEIFMRDCRL--VYPDALY-MGVGGTYDVFT 197 (243)
T ss_pred HHHHHHHHHH--hCCCCEE-EEeCeEEEEec
Confidence 3544332222 2244444 34677776653
No 217
>PRK05866 short chain dehydrogenase; Provisional
Probab=50.85 E-value=29 Score=35.51 Aligned_cols=39 Identities=31% Similarity=0.478 Sum_probs=26.7
Q ss_pred cccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 79 IVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 79 ~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..++.+++|++++. .||+| ..+++.|+++|++|.++..+
T Consensus 35 ~~~~~~k~vlItGa-------sggIG---~~la~~La~~G~~Vi~~~R~ 73 (293)
T PRK05866 35 PVDLTGKRILLTGA-------SSGIG---EAAAEQFARRGATVVAVARR 73 (293)
T ss_pred CcCCCCCEEEEeCC-------CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 34445556655543 47777 56778899999999887654
No 218
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=50.21 E-value=29 Score=33.51 Aligned_cols=37 Identities=24% Similarity=0.071 Sum_probs=29.3
Q ss_pred CCceEEEEeccccCccccccHHHHh--hhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~--~~La~~L~~~Gh~V~vit~~ 127 (612)
.++||++-. +||.+.+- ..|.+.|.+.||+|.++...
T Consensus 4 ~~k~IllgV--------TGsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 4 KGKRIGFGL--------TGSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CCCEEEEEE--------cCHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 467877664 57777664 78999999999999888765
No 219
>COG4635 HemG Flavodoxin [Energy production and conversion / Coenzyme metabolism]
Probab=49.70 E-value=23 Score=32.77 Aligned_cols=37 Identities=14% Similarity=0.173 Sum_probs=31.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
||+|++-++ +.|-.......++..|.++||+|++.=.
T Consensus 1 Mk~LIlYst-----r~GqT~kIA~~iA~~L~e~g~qvdi~dl 37 (175)
T COG4635 1 MKTLILYST-----RDGQTRKIAEYIASHLRESGIQVDIQDL 37 (175)
T ss_pred CceEEEEec-----CCCcHHHHHHHHHHHhhhcCCeeeeeeh
Confidence 788888653 4788888999999999999999998743
No 220
>PLN02534 UDP-glycosyltransferase
Probab=49.70 E-value=4.1e+02 Score=29.61 Aligned_cols=78 Identities=12% Similarity=-0.007 Sum_probs=45.5
Q ss_pred HHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----ccccee-cCceEEEeccc-ccccCCCC----CCCHHH
Q 007224 473 MIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSF-SVDCEAVD----PVDVAA 542 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~l~~~~-~~~~~~v~----~~d~~~ 542 (612)
.+++..++..+-+. +-.++++||+.+|+|+|+-...+ ....+. .=+.|+-++.- ..+..--+ -.+.++
T Consensus 356 ~iL~h~~v~~fvtH--~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~ee 433 (491)
T PLN02534 356 LILSHPAIGGFLTH--CGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDE 433 (491)
T ss_pred HHhcCCccceEEec--CccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHH
Confidence 37888888554444 23468999999999999986533 111222 22345544210 00000000 136799
Q ss_pred HHHHHHHHHH
Q 007224 543 VSTTVRRALA 552 (612)
Q Consensus 543 la~~l~~ll~ 552 (612)
++++|++++.
T Consensus 434 v~~~v~~~m~ 443 (491)
T PLN02534 434 VEKAVKTLMD 443 (491)
T ss_pred HHHHHHHHhc
Confidence 9999999995
No 221
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=49.15 E-value=56 Score=34.24 Aligned_cols=81 Identities=25% Similarity=0.400 Sum_probs=50.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccCh------------HHHHHHHHhcCEEEe--CCCCCCCcH---HH
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNI------------PLAHMIIAGADFILI--PSRFEPCGL---IQ 494 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~------------~~~~~~l~~adi~l~--pS~~E~~gl---~~ 494 (612)
+-.+-|+|-|. .-+.+.+..+.++-++..+-.+.. ..++++++.||++++ |..-|+-|+ ..
T Consensus 142 gkTvGIiG~G~--IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~eT~g~i~~~~ 219 (324)
T COG0111 142 GKTVGIIGLGR--IGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPETRGLINAEE 219 (324)
T ss_pred CCEEEEECCCH--HHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcchhcccCHHH
Confidence 34555666665 555555555555544444444311 235679999999875 556677665 47
Q ss_pred HHHHHcCCceEEcCCCCccc
Q 007224 495 LHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 495 lEAma~G~PvI~s~~gg~~e 514 (612)
+..|--|.-.|-+.-|++.|
T Consensus 220 ~a~MK~gailIN~aRG~vVd 239 (324)
T COG0111 220 LAKMKPGAILINAARGGVVD 239 (324)
T ss_pred HhhCCCCeEEEECCCcceec
Confidence 77777788777777776554
No 222
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase
Probab=48.17 E-value=28 Score=40.23 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=26.7
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
.++++|++|+.. .+|+. +|.+|+++|++|+|+=
T Consensus 79 ~~~~~VlIVGgG------IaGLa-----lAlaL~r~Gi~V~V~E 111 (668)
T PLN02927 79 KKKSRVLVAGGG------IGGLV-----FALAAKKKGFDVLVFE 111 (668)
T ss_pred cCCCCEEEECCC------HHHHH-----HHHHHHhcCCeEEEEe
Confidence 456899999864 46666 8889999999999984
No 223
>PF12996 DUF3880: DUF based on E. rectale Gene description (DUF3880); InterPro: IPR024542 This entry represents proteins of unknown function. The Eubacterium rectale gene appears to be upregulated in the presence of Bacteroides thetaiotaomicron compared to growth in pure culture [].
Probab=48.06 E-value=41 Score=27.16 Aligned_cols=44 Identities=14% Similarity=0.238 Sum_probs=37.8
Q ss_pred HHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCC
Q 007224 313 AGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLT 367 (612)
Q Consensus 313 ~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~ 367 (612)
......|.|++.-+...+.+++ .|+. ++..+|-++|+..|.|..
T Consensus 14 ~i~~~~~~iFt~D~~~~~~~~~---~G~~--------~V~yLPLAa~~~~~~p~~ 57 (79)
T PF12996_consen 14 SIANSYDYIFTFDRSFVEEYRN---LGAE--------NVFYLPLAANPERFRPIP 57 (79)
T ss_pred hhCCCCCEEEEECHHHHHHHHH---cCCC--------CEEEccccCCHHHhCccc
Confidence 3456889999999999999997 6765 899999999999998864
No 224
>PRK10360 DNA-binding transcriptional activator UhpA; Provisional
Probab=47.74 E-value=2.3e+02 Score=26.10 Aligned_cols=108 Identities=18% Similarity=0.194 Sum_probs=63.5
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHcCCceEEcCC
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+++|+.+.+ .....+++.....++ ....... +.......+. ..|++++-... +.-|..+++.+...+|+|+...
T Consensus 3 ~ilivd~~~-~~~~~l~~~L~~~~~-~~~~~~~~~~~~~l~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~~~vi~~s~ 80 (196)
T PRK10360 3 TVALIDDHL-IVRSGFAQLLGLEPD-LQVVAEFGSGREALAGLPGRGVQVCICDISMPDISGLELLSQLPKGMATIMLSV 80 (196)
T ss_pred EEEEECCcH-HHHHHHHHHHccCCC-cEEEEEECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHccCCCEEEEEC
Confidence 566777654 234445544432221 2212222 2333323332 46888876543 4457778887777788877643
Q ss_pred CCcc----cceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 510 GGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 510 gg~~----e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-... +.+..|..|++. .|.+.+++.+++..++..
T Consensus 81 ~~~~~~~~~~~~~ga~~~i~----------kp~~~~~l~~~i~~~~~~ 118 (196)
T PRK10360 81 HDSPALVEQALNAGARGFLS----------KRCSPDELIAAVHTVATG 118 (196)
T ss_pred CCCHHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHcC
Confidence 3222 345567788987 899999999999988753
No 225
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=46.69 E-value=24 Score=35.60 Aligned_cols=39 Identities=23% Similarity=0.280 Sum_probs=28.6
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
++||||+.+..-. -+.-+..|.++|.+.| +|+|++|...
T Consensus 4 ~~M~ILltNDDGi-------~a~Gi~aL~~~l~~~g-~V~VvAP~~~ 42 (257)
T PRK13932 4 KKPHILVCNDDGI-------EGEGIHVLAASMKKIG-RVTVVAPAEP 42 (257)
T ss_pred CCCEEEEECCCCC-------CCHHHHHHHHHHHhCC-CEEEEcCCCC
Confidence 4699999887521 1224677888998888 8999999744
No 226
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=46.25 E-value=16 Score=40.37 Aligned_cols=138 Identities=20% Similarity=0.169 Sum_probs=90.5
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHH----HHHHHHHhccc-C----CcEEEEEeCCc-h--hHHHHHHHHHHH--
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSD----ILAAAIPHFIK-E----NVQIIVLGTGK-K--PMEKQLEQLEIL-- 455 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d----~ll~a~~~l~~-~----~~~lvivG~g~-~--~~~~~l~~l~~~-- 455 (612)
.+.+++|...+++...=+.+-|+.++|..- -++-.+.++++ + --+-+|+|... + .+-+.+-+|...
T Consensus 550 ~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~e~~k~fvprtvm~GGKaapgY~mAK~Iiklit~V~ 629 (843)
T KOG2099|consen 550 YLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKEEPAKAFVPRTVMIGGKAAPGYHMAKLIIKLITAVA 629 (843)
T ss_pred HHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCceEEEEcCccCchhHHHHHHHHHHHHHH
Confidence 345666766555444445578999988643 34555566655 2 23456677532 2 123333333321
Q ss_pred -----C-----CCceEEEeccChHHHHHHHHhcCEEEeCC--CCCCCcHHHHHHHHcCCceEEcCCCCcccceec--Cce
Q 007224 456 -----Y-----PEKARGVAKFNIPLAHMIIAGADFILIPS--RFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFT 521 (612)
Q Consensus 456 -----~-----~~~i~~~~~~~~~~~~~~l~~adi~l~pS--~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~ 521 (612)
. ..++++...+...++..++.++|+-=.-| -.|+.|..-+.-|..|+-+|.|-.|..+|+.++ .++
T Consensus 630 dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NMKF~lNG~l~IGTlDGANVEm~eE~GeeN 709 (843)
T KOG2099|consen 630 DVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNMKFMLNGALTIGTLDGANVEMAEEAGEEN 709 (843)
T ss_pred HHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcceEEecCeEEEecccccchHHHHHcCccc
Confidence 1 12567777777788888888888864444 459999999999999999999999999988775 357
Q ss_pred EEEecc
Q 007224 522 GFQMGS 527 (612)
Q Consensus 522 G~l~~~ 527 (612)
=|+||.
T Consensus 710 ~FiFG~ 715 (843)
T KOG2099|consen 710 FFIFGM 715 (843)
T ss_pred EEEecc
Confidence 788874
No 227
>cd00027 BRCT Breast Cancer Suppressor Protein (BRCA1), carboxy-terminal domain. The BRCT domain is found within many DNA damage repair and cell cycle checkpoint proteins. The unique diversity of this domain superfamily allows BRCT modules to interact forming homo/hetero BRCT multimers, BRCT-non-BRCT interactions, and interactions within DNA strand breaks.
Probab=45.61 E-value=56 Score=24.27 Aligned_cols=64 Identities=13% Similarity=0.150 Sum_probs=43.1
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
+.|.+.|.-.......++++...++..+..... ..++.+|++.... .....+|...|+|+|..+
T Consensus 2 ~~~~i~g~~~~~~~~~l~~~i~~~Gg~v~~~~~----------~~~thvI~~~~~~--~~~~~~~~~~~~~iV~~~ 65 (72)
T cd00027 2 LTFVITGDLPSEERDELKELIEKLGGKVTSSVS----------KKTTHVIVGSDAG--PKKLLKAIKLGIPIVTPE 65 (72)
T ss_pred CEEEEEecCCCcCHHHHHHHHHHcCCEEecccc----------CCceEEEECCCCC--chHHHHHHHcCCeEecHH
Confidence 567888875334678888888888865543221 4677777775432 122788889999988764
No 228
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=45.45 E-value=33 Score=32.04 Aligned_cols=41 Identities=27% Similarity=0.244 Sum_probs=34.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
+|+|+-|+.. +..|-.+.+..|.+.|.++|++|-+|=..+.
T Consensus 1 m~~Il~ivG~-----k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh 41 (161)
T COG1763 1 MMKILGIVGY-----KNSGKTTLIEKLVRKLKARGYRVATVKHAHH 41 (161)
T ss_pred CCcEEEEEec-----CCCChhhHHHHHHHHHHhCCcEEEEEEecCC
Confidence 4788888753 5788999999999999999999999976544
No 229
>PRK13849 putative crown gall tumor protein VirC1; Provisional
Probab=45.43 E-value=27 Score=34.66 Aligned_cols=37 Identities=35% Similarity=0.521 Sum_probs=27.2
Q ss_pred ceEEEEeccccCccccccHHHH--hhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~--~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+-|... .||+|.- ...|+.+|+++|++|.++=..
T Consensus 1 M~iI~v~n~------KGGvGKTT~a~nLA~~la~~G~~VlliD~D 39 (231)
T PRK13849 1 MKLLTFCSF------KGGAGKTTALMGLCAALASDGKRVALFEAD 39 (231)
T ss_pred CeEEEEECC------CCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 666666543 5776654 566899999999999998543
No 230
>PRK07236 hypothetical protein; Provisional
Probab=44.75 E-value=21 Score=38.06 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=27.6
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.|..++|++|+.. .+|+. +|.+|++.|++|+|+=.
T Consensus 3 ~~~~~~ViIVGaG------~aGl~-----~A~~L~~~G~~v~v~E~ 37 (386)
T PRK07236 3 HMSGPRAVVIGGS------LGGLF-----AALLLRRAGWDVDVFER 37 (386)
T ss_pred CCCCCeEEEECCC------HHHHH-----HHHHHHhCCCCEEEEec
Confidence 4678999999754 35555 88889999999999864
No 231
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=44.65 E-value=27 Score=36.14 Aligned_cols=33 Identities=27% Similarity=0.378 Sum_probs=26.1
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++++ .|++|.++. -.|++.|++|++++..
T Consensus 2 ~m~I~IiG--------aGaiG~~~a---~~L~~~G~~V~lv~r~ 34 (305)
T PRK05708 2 SMTWHILG--------AGSLGSLWA---CRLARAGLPVRLILRD 34 (305)
T ss_pred CceEEEEC--------CCHHHHHHH---HHHHhCCCCeEEEEec
Confidence 58999997 478886544 4488899999999875
No 232
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=44.56 E-value=33 Score=34.80 Aligned_cols=27 Identities=33% Similarity=0.571 Sum_probs=23.6
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
++|+| .++++.|+++||+|.+++.+.+
T Consensus 15 SsGIG---~~~A~~lA~~g~~liLvaR~~~ 41 (265)
T COG0300 15 SSGIG---AELAKQLARRGYNLILVARRED 41 (265)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCcHH
Confidence 58888 7799999999999999998754
No 233
>PLN02572 UDP-sulfoquinovose synthase
Probab=44.48 E-value=32 Score=37.65 Aligned_cols=33 Identities=18% Similarity=0.257 Sum_probs=24.0
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
++|||++++. .|++| ..|++.|+++||+|.++.
T Consensus 46 ~~k~VLVTGa-------tGfIG---s~Lv~~L~~~G~~V~~~d 78 (442)
T PLN02572 46 KKKKVMVIGG-------DGYCG---WATALHLSKRGYEVAIVD 78 (442)
T ss_pred cCCEEEEECC-------CcHHH---HHHHHHHHHCCCeEEEEe
Confidence 3567665543 46666 567888999999999874
No 234
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=44.42 E-value=23 Score=34.92 Aligned_cols=26 Identities=31% Similarity=0.468 Sum_probs=21.9
Q ss_pred cHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 102 GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+|++-..+|+.|.++||+|+++-..
T Consensus 7 G~G~vG~~va~~L~~~g~~Vv~Id~d 32 (225)
T COG0569 7 GAGRVGRSVARELSEEGHNVVLIDRD 32 (225)
T ss_pred CCcHHHHHHHHHHHhCCCceEEEEcC
Confidence 55667788999999999999999654
No 235
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=44.27 E-value=67 Score=27.38 Aligned_cols=43 Identities=12% Similarity=0.306 Sum_probs=30.3
Q ss_pred HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEE
Q 007224 419 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 419 d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~ 463 (612)
..+-+.+..+ |+.+++++|+..+.-.+...++++++|+++..+
T Consensus 53 ~~i~~i~~~f--P~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai 95 (100)
T PF09949_consen 53 DNIERILRDF--PERKFILIGDSGQHDPEIYAEIARRFPGRILAI 95 (100)
T ss_pred HHHHHHHHHC--CCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEE
Confidence 4444444444 778999999965444667788999999877654
No 236
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=43.84 E-value=64 Score=33.53 Aligned_cols=45 Identities=22% Similarity=0.386 Sum_probs=34.4
Q ss_pred HHHHHHHhcCEEEe--CCCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 470 LAHMIIAGADFILI--PSRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 470 ~~~~~l~~adi~l~--pS~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
.+.++++.||++++ |..-|+ ++-..++.|--|.-+|-+.-|++.|
T Consensus 189 ~l~ell~~sDvv~lh~Plt~~T~~li~~~~~~~Mk~~a~lIN~aRG~vVD 238 (311)
T PRK08410 189 SLEELLKTSDIISIHAPLNEKTKNLIAYKELKLLKDGAILINVGRGGIVN 238 (311)
T ss_pred cHHHHhhcCCEEEEeCCCCchhhcccCHHHHHhCCCCeEEEECCCccccC
Confidence 35679999999876 444455 5567999999999888888887664
No 237
>PRK12827 short chain dehydrogenase; Provisional
Probab=42.94 E-value=32 Score=33.60 Aligned_cols=35 Identities=31% Similarity=0.502 Sum_probs=26.0
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
+++|+|++++. .||+| ..+++.|+++||+|.++..
T Consensus 4 ~~~~~ilItGa-------sg~iG---~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 4 LDSRRVLITGG-------SGGLG---RAIAVRLAADGADVIVLDI 38 (249)
T ss_pred cCCCEEEEECC-------CChHH---HHHHHHHHHCCCeEEEEcC
Confidence 34577776654 47777 5688889999999988764
No 238
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=42.86 E-value=33 Score=33.37 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=25.2
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
++.|+|++++. +||+| ..|++.|.++||+|++++.+
T Consensus 4 ~~~~~vlItGa-------sg~iG---~~l~~~l~~~g~~v~~~~~~ 39 (249)
T PRK12825 4 LMGRVALVTGA-------ARGLG---RAIALRLARAGADVVVHYRS 39 (249)
T ss_pred CCCCEEEEeCC-------CchHH---HHHHHHHHHCCCeEEEEeCC
Confidence 33456776653 46666 56788899999999776654
No 239
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=41.79 E-value=30 Score=34.64 Aligned_cols=37 Identities=27% Similarity=0.368 Sum_probs=28.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
||||+.+.. |=.+..+..|.++|.+.| +|+|++|...
T Consensus 1 M~ILltNDD-------Gi~a~Gi~aL~~~l~~~g-~V~VvAP~~~ 37 (244)
T TIGR00087 1 MKILLTNDD-------GIHSPGIRALYQALKELG-EVTVVAPARQ 37 (244)
T ss_pred CeEEEECCC-------CCCCHhHHHHHHHHHhCC-CEEEEeCCCC
Confidence 899988864 222335778999999988 9999999743
No 240
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=41.56 E-value=29 Score=35.62 Aligned_cols=31 Identities=29% Similarity=0.515 Sum_probs=24.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++++ .|++| ..++..|++.||+|++++.
T Consensus 1 mkI~IiG--------~G~iG---~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVG--------AGAVG---GTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEEC--------CCHHH---HHHHHHHHHCCCceEEEec
Confidence 7899886 35555 4467778999999999986
No 241
>TIGR01380 glut_syn glutathione synthetase, prokaryotic. This model was built using glutathione synthetases found in Gram-negative bacteria. This gene does not appear to be present in genomes of Gram-positive bacteria. Glutathione synthetase has an ATP-binding domain in the COOH terminus and catalyzes the second step in the glutathione biosynthesis pathway: ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione. Glutathione is a tripeptide that functions as a reductant in many cellular reactions.
Probab=41.53 E-value=25 Score=36.59 Aligned_cols=40 Identities=20% Similarity=0.194 Sum_probs=30.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+|+-. |.....--.+....|..+..++||+|.++.+.
T Consensus 1 m~~~~~~~---~~~~~~~~~~st~~L~~aa~~rG~~v~~~~~~ 40 (312)
T TIGR01380 1 LKVAFQMD---PIESINIGKDTTFALMEEAQKRGHELFFYEPG 40 (312)
T ss_pred CeEEEEeC---CHHHCCCCcChHHHHHHHHHHcCCEEEEEehh
Confidence 89999985 33333333446788999999999999999987
No 242
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=41.15 E-value=36 Score=35.22 Aligned_cols=34 Identities=32% Similarity=0.358 Sum_probs=25.9
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|||.+|+. | .+=..++..|+++||+|+++...
T Consensus 3 ~~m~I~iiG~--------G---~~G~~lA~~l~~~G~~V~~~~r~ 36 (308)
T PRK14619 3 QPKTIAILGA--------G---AWGSTLAGLASANGHRVRVWSRR 36 (308)
T ss_pred CCCEEEEECc--------c---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 5799999963 3 23366888999999999887654
No 243
>PRK06932 glycerate dehydrogenase; Provisional
Probab=40.59 E-value=74 Score=33.15 Aligned_cols=44 Identities=23% Similarity=0.252 Sum_probs=34.0
Q ss_pred HHHHHHhcCEEEe--CCCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILI--PSRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~--pS~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++ |..-|+ ++-..++.|--|.-+|-+.-|++.|
T Consensus 191 l~ell~~sDiv~l~~Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~~Vd 239 (314)
T PRK06932 191 FEEVLKQADIVTLHCPLTETTQNLINAETLALMKPTAFLINTGRGPLVD 239 (314)
T ss_pred HHHHHHhCCEEEEcCCCChHHhcccCHHHHHhCCCCeEEEECCCccccC
Confidence 5679999999986 434455 4567899999999888888887665
No 244
>PF01081 Aldolase: KDPG and KHG aldolase; InterPro: IPR000887 4-Hydroxy-2-oxoglutarate aldolase (4.1.3.16 from EC) (KHG-aldolase) catalyzes the interconversion of 4-hydroxy-2-oxoglutarate into pyruvate and glyoxylate. Phospho-2-dehydro-3-deoxygluconate aldolase (4.1.2.14 from EC) (KDPG-aldolase) catalyzes the interconversion of 6-phospho-2-dehydro-3-deoxy-D-gluconate into pyruvate and glyceraldehyde 3-phosphate. These two enzymes are structurally and functionally related []. They are both homotrimeric proteins of approximately 220 amino-acid residues. They are class I aldolases whose catalytic mechanism involves the formation of a Schiff-base intermediate between the substrate and the epsilon-amino group of a lysine residue. In both enzymes, an arginine is required for catalytic activity.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VCR_A 1FQ0_A 1EUN_A 1EUA_B 1FWR_A 2C0A_B 1WBH_A 1WAU_A 2YW3_B 2YW4_A ....
Probab=40.35 E-value=1.8e+02 Score=28.16 Aligned_cols=69 Identities=20% Similarity=0.258 Sum_probs=39.8
Q ss_pred HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhcCEEEeCCCC
Q 007224 419 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRF 487 (612)
Q Consensus 419 d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~-~~l~~adi~l~pS~~ 487 (612)
+..++.++.+.+..++++=+--..+...+.++.+.+++++-+.+.+.. +.+++. .+-++|++++.|...
T Consensus 20 ~~a~~~~~al~~gGi~~iEiT~~t~~a~~~I~~l~~~~p~~~vGAGTV~~~e~a~~a~~aGA~FivSP~~~ 90 (196)
T PF01081_consen 20 EDAVPIAEALIEGGIRAIEITLRTPNALEAIEALRKEFPDLLVGAGTVLTAEQAEAAIAAGAQFIVSPGFD 90 (196)
T ss_dssp GGHHHHHHHHHHTT--EEEEETTSTTHHHHHHHHHHHHTTSEEEEES--SHHHHHHHHHHT-SEEEESS--
T ss_pred HHHHHHHHHHHHCCCCEEEEecCCccHHHHHHHHHHHCCCCeeEEEeccCHHHHHHHHHcCCCEEECCCCC
Confidence 344444444444455554333334446778888888888767777765 445544 466889999999763
No 245
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=40.18 E-value=2.4e+02 Score=27.40 Aligned_cols=89 Identities=11% Similarity=0.076 Sum_probs=52.7
Q ss_pred CHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhcCEEEeCCCCCC-----
Q 007224 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRFEP----- 489 (612)
Q Consensus 417 g~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~-~~l~~adi~l~pS~~E~----- 489 (612)
..+..++.++.+.+..++.+=+--..+...+.++++.+++++-+.+-+.. +.+++. .+-++|++++.|...+.
T Consensus 14 ~~~~a~~ia~al~~gGi~~iEit~~tp~a~~~I~~l~~~~~~~~vGAGTVl~~e~a~~ai~aGA~FivSP~~~~~vi~~a 93 (201)
T PRK06015 14 DVEHAVPLARALAAGGLPAIEITLRTPAALDAIRAVAAEVEEAIVGAGTILNAKQFEDAAKAGSRFIVSPGTTQELLAAA 93 (201)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccHHHHHHHHHHHCCCCEEeeEeCcCHHHHHHHHHcCCCEEECCCCCHHHHHHH
Confidence 55666666666655333333222223335677888888887656666655 444444 36678888888875321
Q ss_pred ------------CcHHHHHHHHcCCceE
Q 007224 490 ------------CGLIQLHAMRYGTVPI 505 (612)
Q Consensus 490 ------------~gl~~lEAma~G~PvI 505 (612)
.+.=+++|+.+|.-+|
T Consensus 94 ~~~~i~~iPG~~TptEi~~A~~~Ga~~v 121 (201)
T PRK06015 94 NDSDVPLLPGAATPSEVMALREEGYTVL 121 (201)
T ss_pred HHcCCCEeCCCCCHHHHHHHHHCCCCEE
Confidence 1334666777776655
No 246
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=39.84 E-value=80 Score=31.79 Aligned_cols=42 Identities=19% Similarity=0.124 Sum_probs=31.0
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCc
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGL 512 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~ 512 (612)
+.++++.+|+++..+..+...-.+..|+..|+|+|+..+|-.
T Consensus 54 l~~ll~~~DvVid~t~p~~~~~~~~~al~~G~~vvigttG~s 95 (257)
T PRK00048 54 LEAVLADADVLIDFTTPEATLENLEFALEHGKPLVIGTTGFT 95 (257)
T ss_pred HHHhccCCCEEEECCCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 334566899999777655555567889999999998765543
No 247
>PRK05718 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=39.83 E-value=2.4e+02 Score=27.63 Aligned_cols=87 Identities=15% Similarity=0.104 Sum_probs=51.5
Q ss_pred cCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhcCEEEeCCCCCCCcHH
Q 007224 416 KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRFEPCGLI 493 (612)
Q Consensus 416 Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~-~~l~~adi~l~pS~~E~~gl~ 493 (612)
...+..++.++.+.+..++++=++-..+.-.+.++++.+++++.+.+-+.. +.+++. .+-++||+++.|...+ -+
T Consensus 24 ~~~~~a~~i~~al~~~Gi~~iEitl~~~~~~~~I~~l~~~~p~~~IGAGTVl~~~~a~~a~~aGA~FivsP~~~~---~v 100 (212)
T PRK05718 24 NKLEDAVPLAKALVAGGLPVLEVTLRTPAALEAIRLIAKEVPEALIGAGTVLNPEQLAQAIEAGAQFIVSPGLTP---PL 100 (212)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccHHHHHHHHHHHCCCCEEEEeeccCHHHHHHHHHcCCCEEECCCCCH---HH
Confidence 355666666666655445555444444456778888888888655665544 444444 3667889999887532 22
Q ss_pred HHHHHHcCCceE
Q 007224 494 QLHAMRYGTVPI 505 (612)
Q Consensus 494 ~lEAma~G~PvI 505 (612)
+-.|..+|+|.+
T Consensus 101 i~~a~~~~i~~i 112 (212)
T PRK05718 101 LKAAQEGPIPLI 112 (212)
T ss_pred HHHHHHcCCCEe
Confidence 333444444444
No 248
>PRK05993 short chain dehydrogenase; Provisional
Probab=39.58 E-value=41 Score=33.90 Aligned_cols=35 Identities=20% Similarity=0.337 Sum_probs=24.8
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 3 ~~k~vlItGa------sggiG---~~la~~l~~~G~~Vi~~~r~ 37 (277)
T PRK05993 3 MKRSILITGC------SSGIG---AYCARALQSDGWRVFATCRK 37 (277)
T ss_pred CCCEEEEeCC------CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 3455666532 57777 55788899999999887654
No 249
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=39.56 E-value=1.7e+02 Score=33.29 Aligned_cols=181 Identities=16% Similarity=0.049 Sum_probs=99.0
Q ss_pred HHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeC---CchhHHHHHHHHHHHCCCceEEEec
Q 007224 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGT---GKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 391 l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~---g~~~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
.+..+|||.| ..++..+..| +|==...++...++.+ |+..|++.-- |...+...++++..+ +++|.+..-
T Consensus 749 ~r~~y~Lp~d--~vvf~~FNqL--yKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge~rf~ty~~~~Gl~-p~riifs~v 823 (966)
T KOG4626|consen 749 TRSQYGLPED--AVVFCNFNQL--YKIDPSTLQMWANILKRVPNSVLWLLRFPAVGEQRFRTYAEQLGLE-PDRIIFSPV 823 (966)
T ss_pred CCCCCCCCCC--eEEEeechhh--hcCCHHHHHHHHHHHHhCCcceeEEEeccccchHHHHHHHHHhCCC-ccceeeccc
Confidence 3667888843 3444444443 3433344444444433 7777766544 223344444444432 234443322
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCccccee-----cCceEEEecccccccCCCCCCCH
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-----EGFTGFQMGSFSVDCEAVDPVDV 540 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~-----~g~~G~l~~~~~~~~~~v~~~d~ 540 (612)
-..++--.-..-+|+.+=+...-| -.+-+|.+..|+|+|+-...-+..-|. .-+.|-+ -..+.
T Consensus 824 a~k~eHvrr~~LaDv~LDTplcnG-hTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hl-----------iak~~ 891 (966)
T KOG4626|consen 824 AAKEEHVRRGQLADVCLDTPLCNG-HTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHL-----------IAKNR 891 (966)
T ss_pred cchHHHHHhhhhhhhcccCcCcCC-cccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHH-----------HhhhH
Confidence 222221235566788886665432 234568899999999765322211111 1112322 24577
Q ss_pred HHHHHHHHHHHHhhCHHHHHHHHHHH---H--HhcCCcHHHHHHHHHHHHHHHHc
Q 007224 541 AAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 541 ~~la~~l~~ll~~~~~~~~~~~~~~~---~--~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
++..+.-.++-.+ .+.++++..+- + ..-|+-.+.+..++++|.++...
T Consensus 892 eEY~~iaV~Latd--~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW~~ 944 (966)
T KOG4626|consen 892 EEYVQIAVRLATD--KEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMWKK 944 (966)
T ss_pred HHHHHHHHHhhcC--HHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHHHH
Confidence 8888877777776 44444443322 2 35689999999999999998854
No 250
>PRK13869 plasmid-partitioning protein RepA; Provisional
Probab=39.49 E-value=34 Score=37.09 Aligned_cols=37 Identities=30% Similarity=0.408 Sum_probs=28.0
Q ss_pred CCceEEEEeccccCccccccHH--HHhhhhHHHHHhCCCeEEEEe
Q 007224 83 VGLNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit 125 (612)
.+|+|+-|... .||+| +.+..||.+|+.+|++|.+|=
T Consensus 119 ~~~~vIav~n~------KGGvGKTTta~nLA~~LA~~G~rVLlID 157 (405)
T PRK13869 119 EHLQVIAVTNF------KGGSGKTTTSAHLAQYLALQGYRVLAVD 157 (405)
T ss_pred CCceEEEEEcC------CCCCCHHHHHHHHHHHHHhcCCceEEEc
Confidence 36787777654 46655 456779999999999999883
No 251
>PRK10840 transcriptional regulator RcsB; Provisional
Probab=39.40 E-value=3.4e+02 Score=25.79 Aligned_cols=110 Identities=8% Similarity=0.048 Sum_probs=64.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHHHHHH--hcCEEEeCCCCCC----CcHHHHHHHH---cC
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIA--GADFILIPSRFEP----CGLIQLHAMR---YG 501 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~~~l~--~adi~l~pS~~E~----~gl~~lEAma---~G 501 (612)
+++++|+.+.+ .....++.+....+. +.....+ +.+.....+. ..|++++-....+ .|+.+++.+. -.
T Consensus 3 ~~~Ilivdd~~-~~~~~l~~~L~~~~~-~~~v~~~~~~~~~~~~~~~~~~DlvllD~~l~~~~~~~g~~~~~~l~~~~~~ 80 (216)
T PRK10840 3 NMNVIIADDHP-IVLFGIRKSLEQIEW-VNVVGEFEDSTALINNLPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPS 80 (216)
T ss_pred ceEEEEECCcH-HHHHHHHHHHhcCCC-CEEEEEECCHHHHHHHHHhCCCCEEEEeCcCCCCCCCCHHHHHHHHHHHCCC
Confidence 35677776654 344455555544432 2212222 3333333443 4688888654433 5777777664 34
Q ss_pred CceEEcCCCCc----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 502 TVPIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 502 ~PvI~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|+|+-....- .+.+..|..||+. .+.+++++.++|..++..
T Consensus 81 ~~iIvls~~~~~~~~~~a~~~Ga~~yl~----------K~~~~~~l~~ai~~v~~g 126 (216)
T PRK10840 81 LSIIVLTMNNNPAILSAVLDLDIEGIVL----------KQGAPTDLPKALAALQKG 126 (216)
T ss_pred CcEEEEEecCCHHHHHHHHHCCCeEEEE----------CCCCHHHHHHHHHHHHCC
Confidence 56665432222 2346678899987 888999999999988763
No 252
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=39.00 E-value=42 Score=33.05 Aligned_cols=37 Identities=22% Similarity=0.326 Sum_probs=26.5
Q ss_pred ceEEEEeccccCccccc--cHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTG--GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~G--G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+-|... .| |-.+.+..||.+|+++|++|.+|=..
T Consensus 1 m~iI~v~s~------KGGvGKTt~a~nla~~la~~g~~VlliD~D 39 (246)
T TIGR03371 1 MKVIAIVGV------KGGVGKTTLTANLASALKLLGEPVLAIDLD 39 (246)
T ss_pred CcEEEEEeC------CCCccHHHHHHHHHHHHHhCCCcEEEEeCC
Confidence 665555432 34 55566778999999999999998543
No 253
>cd02040 NifH NifH gene encodes component II (iron protein) of nitrogenase. Nitrogenase is responsible for the biological nitrogen fixation, i.e. reduction of molecular nitrogen to ammonia. NifH consists of two oxygen-sensitive metallosulfur proteins: the mollybdenum-iron (alternatively, vanadium-iron or iron-iron) protein (commonly referred to as component 1), and the iron protein (commonly referred to as component 2). The iron protein is a homodimer, with an Fe4S4 cluster bound between the subunits and two ATP-binding domains. It supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component 1 for the reduction of molecular nitrogen to ammonia.
Probab=38.92 E-value=43 Score=33.58 Aligned_cols=25 Identities=32% Similarity=0.425 Sum_probs=20.5
Q ss_pred cHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 102 GLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|-.+.+..||.+|+++|++|.+|=.
T Consensus 13 GKTT~~~nLA~~La~~G~kVlliD~ 37 (270)
T cd02040 13 GKSTTTQNLSAALAEMGKKVMIVGC 37 (270)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEEc
Confidence 4455678899999999999999943
No 254
>PRK09271 flavodoxin; Provisional
Probab=38.81 E-value=50 Score=30.51 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=29.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
|||+++-.+ .+|..+.+...++..|.+.|++|.+.-
T Consensus 1 mkv~IvY~S-----~tGnTe~~A~~ia~~l~~~g~~v~~~~ 36 (160)
T PRK09271 1 MRILLAYAS-----LSGNTREVAREIEERCEEAGHEVDWVE 36 (160)
T ss_pred CeEEEEEEc-----CCchHHHHHHHHHHHHHhCCCeeEEEe
Confidence 788887643 478999999999999999999987654
No 255
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=38.80 E-value=3.6e+02 Score=25.90 Aligned_cols=100 Identities=14% Similarity=0.044 Sum_probs=61.1
Q ss_pred cccCHHHHHHHHHhcccCCcEEEEEeCCc---hhHHHHHHHHHHHCCCceEEEecc---ChHHHHHHHHhcCEEEeCC--
Q 007224 414 EQKGSDILAAAIPHFIKENVQIIVLGTGK---KPMEKQLEQLEILYPEKARGVAKF---NIPLAHMIIAGADFILIPS-- 485 (612)
Q Consensus 414 ~~Kg~d~ll~a~~~l~~~~~~lvivG~g~---~~~~~~l~~l~~~~~~~i~~~~~~---~~~~~~~~l~~adi~l~pS-- 485 (612)
.....+.+-+.+......+.+++++.+.. ..+.+.+.+.-.+++-.......+ +.+...+.+..||+++++-
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~i~~iptA~~~~~~~~~~~~~~~~~lG~~~~~~~~~~~~~~~~~~~~l~~ad~I~~~GG~ 90 (210)
T cd03129 11 KAHARPILQDFLARAGGAGARVLFIPTASGDRDEYGEEYRAAFERLGVEVVHLLLIDTANDPDVVARLLEADGIFVGGGN 90 (210)
T ss_pred ccChHHHHHHHHHHcCCCCCeEEEEeCCCCChHHHHHHHHHHHHHcCCceEEEeccCCCCCHHHHHHHhhCCEEEEcCCc
Confidence 34444555555555543577888888754 233344444444555444444433 3456667999999999874
Q ss_pred ------CCCC--CcHHHHHHHHcCCceEEcCCCCcc
Q 007224 486 ------RFEP--CGLIQLHAMRYGTVPIVASTGGLV 513 (612)
Q Consensus 486 ------~~E~--~gl~~lEAma~G~PvI~s~~gg~~ 513 (612)
.+.. .--.+.+...-|+|++.++.|.+.
T Consensus 91 ~~~~~~~l~~t~~~~~i~~~~~~G~v~~G~SAGA~~ 126 (210)
T cd03129 91 QLRLLSVLRETPLLDAILKRVARGVVIGGTSAGAAV 126 (210)
T ss_pred HHHHHHHHHhCChHHHHHHHHHcCCeEEEcCHHHHH
Confidence 1222 223578888889999999877643
No 256
>TIGR03453 partition_RepA plasmid partitioning protein RepA. Members of this family are the RepA (or ParA) protein involved in replicon partitioning. All known examples occur in bacterial species with two or more replicons, on a plasmid or the smaller chromosome. Note that an apparent exception may be seen as a pseudomolecule from assembly of an incompletely sequenced genome. Members of this family belong to a larger family that also includes the enzyme cobyrinic acid a,c-diamide synthase, but assignment of that name to members of this family would be in error.
Probab=38.49 E-value=38 Score=36.41 Aligned_cols=38 Identities=32% Similarity=0.390 Sum_probs=28.6
Q ss_pred CCceEEEEeccccCccccccHH--HHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit~ 126 (612)
++|+|+.|+.. .||+| +....||.+|+.+|++|.+|=.
T Consensus 102 ~~~~vI~v~n~------KGGvGKTT~a~nLA~~La~~G~rVLlID~ 141 (387)
T TIGR03453 102 EHLQVIAVTNF------KGGSGKTTTAAHLAQYLALRGYRVLAIDL 141 (387)
T ss_pred CCceEEEEEcc------CCCcCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 56887777654 45554 5567799999999999999843
No 257
>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....
Probab=38.45 E-value=99 Score=29.22 Aligned_cols=34 Identities=32% Similarity=0.596 Sum_probs=23.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCe--EEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR--VMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~--V~vit~~ 127 (612)
|||+|+.+. .+.....+..++.+.+++ +..+...
T Consensus 1 mrI~~~~Sg---------~~~~~~~~l~~l~~~~~~~~iv~Vit~ 36 (181)
T PF00551_consen 1 MRIVFFGSG---------SGSFLKALLEALKARGHNVEIVLVITN 36 (181)
T ss_dssp EEEEEEESS---------SSHHHHHHHHHHHTTSSEEEEEEEEES
T ss_pred CEEEEEEcC---------CCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 899999753 124566778899999998 4444443
No 258
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=38.38 E-value=4.3e+02 Score=26.59 Aligned_cols=91 Identities=11% Similarity=-0.053 Sum_probs=58.5
Q ss_pred CHHHHHHHHHhcccCCcEEEEEeCCc------------hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeC
Q 007224 417 GSDILAAAIPHFIKENVQIIVLGTGK------------KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIP 484 (612)
Q Consensus 417 g~d~ll~a~~~l~~~~~~lvivG~g~------------~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~p 484 (612)
.-+.+++.++.+++..++++..|.=+ .+-.+.+.+..++++..+.- -.++...+..+...+|++-+|
T Consensus 27 s~e~~~~~a~~~~~~g~~~~r~g~~kpRts~~sf~G~G~~gl~~L~~~~~~~Gl~~~T-ev~d~~~v~~~~e~vdilqIg 105 (250)
T PRK13397 27 SYDHIRLAASSAKKLGYNYFRGGAYKPRTSAASFQGLGLQGIRYLHEVCQEFGLLSVS-EIMSERQLEEAYDYLDVIQVG 105 (250)
T ss_pred CHHHHHHHHHHHHHcCCCEEEecccCCCCCCcccCCCCHHHHHHHHHHHHHcCCCEEE-eeCCHHHHHHHHhcCCEEEEC
Confidence 33556666666655577888777621 12355666677777743332 234566666667789999999
Q ss_pred CCCCCCcHHHHHHH-HcCCceEEcCC
Q 007224 485 SRFEPCGLIQLHAM-RYGTVPIVAST 509 (612)
Q Consensus 485 S~~E~~gl~~lEAm-a~G~PvI~s~~ 509 (612)
|+. -.-..+++++ ..|+||+.+..
T Consensus 106 s~~-~~n~~LL~~va~tgkPVilk~G 130 (250)
T PRK13397 106 ARN-MQNFEFLKTLSHIDKPILFKRG 130 (250)
T ss_pred ccc-ccCHHHHHHHHccCCeEEEeCC
Confidence 974 3335566666 57999999873
No 259
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=38.36 E-value=39 Score=33.43 Aligned_cols=26 Identities=31% Similarity=0.517 Sum_probs=20.7
Q ss_pred ccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 99 KTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 99 ~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|++| ..|+.+|.++||+|++++..
T Consensus 24 SSG~iG---~aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 24 STGQLG---KIIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred cchHHH---HHHHHHHHhCCCEEEEEECc
Confidence 366677 66888999999999999743
No 260
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=38.05 E-value=5.2e+02 Score=27.45 Aligned_cols=104 Identities=12% Similarity=0.035 Sum_probs=63.3
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc------------hhHHHHHHHHHHHCCCceEEEeccChHH
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK------------KPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~------------~~~~~~l~~l~~~~~~~i~~~~~~~~~~ 470 (612)
.+.++..| --.-...+.+++.+..+++...+++..|.-+ ++-.+.+++...+++..+.- --++...
T Consensus 100 ~~l~vIAG-PCsIEs~eq~l~~A~~lk~~g~~~~r~g~~kpRtsp~sf~G~g~~gl~~L~~~~~e~Gl~~~t-ev~d~~~ 177 (352)
T PRK13396 100 HPVVVVAG-PCSVENEEMIVETAKRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREATGLGIIT-EVMDAAD 177 (352)
T ss_pred CeEEEEEe-CCcccCHHHHHHHHHHHHHcCCCEEEeeeecCCCCCcccCCchHHHHHHHHHHHHHcCCcEEE-eeCCHHH
Confidence 34555555 3334455667777777766566776655411 23345666666677743332 2345555
Q ss_pred HHHHHHhcCEEEeCCCC-CCCcHHHHHHHHcCCceEEcCC
Q 007224 471 AHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+..+...+|++-++|+. .+|.+ +-++...|+||+.+..
T Consensus 178 v~~~~~~~d~lqIga~~~~n~~L-L~~va~t~kPVllk~G 216 (352)
T PRK13396 178 LEKIAEVADVIQVGARNMQNFSL-LKKVGAQDKPVLLKRG 216 (352)
T ss_pred HHHHHhhCCeEEECcccccCHHH-HHHHHccCCeEEEeCC
Confidence 65566669999999985 45554 3344468999999973
No 261
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=37.88 E-value=43 Score=32.52 Aligned_cols=35 Identities=29% Similarity=0.513 Sum_probs=24.2
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
++|+|++++. .||+| ..+++.|+++||+|.++...
T Consensus 4 ~~~~ilItGa-------sg~iG---~~l~~~l~~~g~~v~~~~r~ 38 (246)
T PRK05653 4 QGKTALVTGA-------SRGIG---RAIALRLAADGAKVVIYDSN 38 (246)
T ss_pred CCCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3456666553 46666 56788899999998666644
No 262
>COG1553 DsrE Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]
Probab=37.71 E-value=65 Score=28.56 Aligned_cols=40 Identities=18% Similarity=0.092 Sum_probs=29.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCC-CeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-h~V~vit~~ 127 (612)
||+.++... +|+ +--.......+|.++.+.| ++|.++-..
T Consensus 1 m~~~Ivvt~-ppY--g~q~a~~A~~fA~all~~gh~~v~iFly~ 41 (126)
T COG1553 1 MKYTIVVTG-PPY--GTESAFSALRFAEALLEQGHELVRLFLYQ 41 (126)
T ss_pred CeEEEEEec-CCC--ccHHHHHHHHHHHHHHHcCCeEEEEEEee
Confidence 788888876 565 3355667889999999997 677777654
No 263
>KOG1021 consensus Acetylglucosaminyltransferase EXT1/exostosin 1 [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Extracellular structures]
Probab=37.69 E-value=2.5e+02 Score=31.03 Aligned_cols=84 Identities=15% Similarity=0.103 Sum_probs=53.2
Q ss_pred HHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCc-eEEcCC--CCcccceecCceEEEecccccccCCCCCCCHHHHHHH
Q 007224 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTV-PIVAST--GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTT 546 (612)
Q Consensus 470 ~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~P-vI~s~~--gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~ 546 (612)
...+.++.+.+-+.|.=.++..-.++||+.+||. ||.++. ....+++.-..-++.+ . .+++-+.
T Consensus 336 ~y~~~m~~S~FCL~p~Gd~~ts~R~fdai~~gCvPViisd~~~lpf~~~~d~~~fSV~v----------~---~~~v~~~ 402 (464)
T KOG1021|consen 336 NYMEGMQDSKFCLCPPGDTPTSPRLFDAIVSGCVPVIISDGIQLPFGDVLDWTEFSVFV----------P---EKDVPEL 402 (464)
T ss_pred hHHHHhhcCeEEECCCCCCcccHhHHHHHHhCCccEEEcCCcccCcCCCccceEEEEEE----------E---HHHhhhH
Confidence 3456899999999999999888899999999985 455552 3444555444334433 3 3333333
Q ss_pred HHHHHHhhCHHHHHHHHHHH
Q 007224 547 VRRALATYGTQALAEMMKNG 566 (612)
Q Consensus 547 l~~ll~~~~~~~~~~~~~~~ 566 (612)
++++|..-..+++..|.++.
T Consensus 403 ~~~iL~~i~~~~~~~m~~~v 422 (464)
T KOG1021|consen 403 IKNILLSIPEEEVLRMRENV 422 (464)
T ss_pred HHHHHHhcCHHHHHHHHHHH
Confidence 56666553344555555544
No 264
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=37.53 E-value=4.5e+02 Score=26.63 Aligned_cols=102 Identities=13% Similarity=0.059 Sum_probs=62.6
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeC-----------Cc-hhHHHHHHHHHHHCCCceEEEeccChHHHH
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGT-----------GK-KPMEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~-----------g~-~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~ 472 (612)
.++..| .-.-...+.+++.++++++...+++..|. |. ....+.+++...+++..+.- -.++...+.
T Consensus 28 ~~~iaG-PCsie~~~~~~~~A~~lk~~g~~~~r~~~~kpRTs~~s~~G~g~~gl~~l~~~~~~~Gl~~~t-e~~d~~~~~ 105 (266)
T PRK13398 28 KIIIAG-PCAVESEEQMVKVAEKLKELGVHMLRGGAFKPRTSPYSFQGLGEEGLKILKEVGDKYNLPVVT-EVMDTRDVE 105 (266)
T ss_pred EEEEEe-CCcCCCHHHHHHHHHHHHHcCCCEEEEeeecCCCCCCccCCcHHHHHHHHHHHHHHcCCCEEE-eeCChhhHH
Confidence 444444 33344677888888888776778888882 11 22345566666677632222 233455555
Q ss_pred HHHHhcCEEEeCCCC-CCCcHHHHHHHHcCCceEEcCC
Q 007224 473 MIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 473 ~~l~~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s~~ 509 (612)
.+..-+|++-++|+. +.++ -+-++...|+||+.++.
T Consensus 106 ~l~~~vd~~kIga~~~~n~~-LL~~~a~~gkPV~lk~G 142 (266)
T PRK13398 106 EVADYADMLQIGSRNMQNFE-LLKEVGKTKKPILLKRG 142 (266)
T ss_pred HHHHhCCEEEECcccccCHH-HHHHHhcCCCcEEEeCC
Confidence 455668999999985 4433 23344567999999974
No 265
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=37.35 E-value=5.9e+02 Score=27.86 Aligned_cols=99 Identities=11% Similarity=0.031 Sum_probs=61.5
Q ss_pred cCEEEeCCCCC--CCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC
Q 007224 478 ADFILIPSRFE--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 478 adi~l~pS~~E--~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 555 (612)
.+-+|++-..| -.|.++-=+...|+|+..-.+|--.+-+..-..-..+ -.+.--+|+.+|.+.+++.++.
T Consensus 241 ~~g~IlTKlD~~argG~aLs~~~~t~~PI~fig~Ge~v~Dle~f~p~~~~------~rilgmgDi~~L~ek~~~~~~~-- 312 (429)
T TIGR01425 241 VGSVIITKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEIFKTQPFI------SKLLGMGDIEGLIDKVQDLKLD-- 312 (429)
T ss_pred CcEEEEECccCCCCccHHhhhHHHHCCCeEEEcCCCChhhcCcCChHHHH------HHHhcCCCcHHHHHHHHHhhhH--
Confidence 45677776655 3566777788899999988877544333221000000 0011347888888888887764
Q ss_pred HHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 556 TQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 556 ~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
+..+++.++.....|+.+.+.+++..+-+
T Consensus 313 -~~~~~~~~k~~~~~f~l~D~~~q~~~i~k 341 (429)
T TIGR01425 313 -DNEKALIEKLKEGTFTLRDMYEQFQNLLK 341 (429)
T ss_pred -HHHHHHHHHHHhCCCCHHHHHHHHHHHHh
Confidence 33445555556678999999888887653
No 266
>PRK07454 short chain dehydrogenase; Provisional
Probab=37.25 E-value=48 Score=32.39 Aligned_cols=36 Identities=17% Similarity=0.272 Sum_probs=25.6
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..||.++|+.. .||+| ..+++.|+++|++|.++...
T Consensus 4 ~~~k~vlItG~------sg~iG---~~la~~l~~~G~~V~~~~r~ 39 (241)
T PRK07454 4 NSMPRALITGA------SSGIG---KATALAFAKAGWDLALVARS 39 (241)
T ss_pred CCCCEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 35777777532 45666 66788899999999888643
No 267
>COG1192 Soj ATPases involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=37.18 E-value=43 Score=33.49 Aligned_cols=37 Identities=32% Similarity=0.521 Sum_probs=26.6
Q ss_pred CceEEEEeccccCccccccHH--HHhhhhHHHHH-hCCCeEEEEee
Q 007224 84 GLNILFVGTEVAPWSKTGGLG--DVLGGLPPALA-ANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~-~~Gh~V~vit~ 126 (612)
+|+|+-|... .||+| +....|+.+|+ ..||+|.++=.
T Consensus 1 ~~~iI~v~n~------KGGvGKTT~a~nLa~~La~~~~~kVLliDl 40 (259)
T COG1192 1 MMKIIAVANQ------KGGVGKTTTAVNLAAALAKRGGKKVLLIDL 40 (259)
T ss_pred CCEEEEEEec------CCCccHHHHHHHHHHHHHHhcCCcEEEEeC
Confidence 3677777654 56665 45667999999 66699999943
No 268
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=37.16 E-value=39 Score=34.52 Aligned_cols=32 Identities=41% Similarity=0.700 Sum_probs=24.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 1 m~I~IiG~--------G~~G---~~~a~~L~~~g~~V~~~~r~ 32 (304)
T PRK06522 1 MKIAILGA--------GAIG---GLFGAALAQAGHDVTLVARR 32 (304)
T ss_pred CEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 78888863 5555 45777789999999999864
No 269
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=37.15 E-value=2.9e+02 Score=26.84 Aligned_cols=70 Identities=17% Similarity=0.199 Sum_probs=43.3
Q ss_pred CHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhcCEEEeCCC
Q 007224 417 GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSR 486 (612)
Q Consensus 417 g~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~-~~l~~adi~l~pS~ 486 (612)
..+..++..+.+.+..++++=+--..+.-.+.++++.+++++-+.+-+.. +.+++. .+-++|++++.|..
T Consensus 18 ~~e~a~~~~~al~~~Gi~~iEit~~t~~a~~~i~~l~~~~~~~~vGAGTVl~~~~a~~a~~aGA~FivsP~~ 89 (204)
T TIGR01182 18 DVDDALPLAKALIEGGLRVLEVTLRTPVALDAIRLLRKEVPDALIGAGTVLNPEQLRQAVDAGAQFIVSPGL 89 (204)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHcCCCEEECCCC
Confidence 45666666666655444444333333445667888888888655666655 444444 36678898888875
No 270
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=37.13 E-value=37 Score=34.07 Aligned_cols=37 Identities=27% Similarity=0.427 Sum_probs=28.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
||||+.+.. |=-+.-+..|+++|. .+++|+|++|..+
T Consensus 1 mrILlTNDD-------Gi~a~Gi~aL~~al~-~~~dV~VVAP~~~ 37 (252)
T COG0496 1 MRILLTNDD-------GIHAPGIRALARALR-EGADVTVVAPDRE 37 (252)
T ss_pred CeEEEecCC-------ccCCHHHHHHHHHHh-hCCCEEEEccCCC
Confidence 899998875 222334677888888 8999999999743
No 271
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=36.40 E-value=45 Score=30.86 Aligned_cols=30 Identities=30% Similarity=0.501 Sum_probs=23.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
|||.||. +|.+=..++..|.++||+|.++-
T Consensus 2 ~~Ig~IG-----------lG~mG~~~a~~L~~~g~~v~~~d 31 (163)
T PF03446_consen 2 MKIGFIG-----------LGNMGSAMARNLAKAGYEVTVYD 31 (163)
T ss_dssp BEEEEE-------------SHHHHHHHHHHHHTTTEEEEEE
T ss_pred CEEEEEc-----------hHHHHHHHHHHHHhcCCeEEeec
Confidence 7888885 34455779999999999998874
No 272
>PRK06180 short chain dehydrogenase; Provisional
Probab=35.91 E-value=50 Score=33.24 Aligned_cols=25 Identities=36% Similarity=0.566 Sum_probs=19.5
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 13 sggiG---~~la~~l~~~G~~V~~~~r~ 37 (277)
T PRK06180 13 SSGFG---RALAQAALAAGHRVVGTVRS 37 (277)
T ss_pred CChHH---HHHHHHHHhCcCEEEEEeCC
Confidence 47777 55777899999999888754
No 273
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=35.77 E-value=24 Score=31.56 Aligned_cols=35 Identities=37% Similarity=0.517 Sum_probs=24.9
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..+|||.||.. |++-..|+.+|.+.||.|.-+..+
T Consensus 8 ~~~l~I~iIGa-----------GrVG~~La~aL~~ag~~v~~v~sr 42 (127)
T PF10727_consen 8 AARLKIGIIGA-----------GRVGTALARALARAGHEVVGVYSR 42 (127)
T ss_dssp ----EEEEECT-----------SCCCCHHHHHHHHTTSEEEEESSC
T ss_pred CCccEEEEECC-----------CHHHHHHHHHHHHCCCeEEEEEeC
Confidence 45799999974 233467999999999999888765
No 274
>PRK06487 glycerate dehydrogenase; Provisional
Probab=35.58 E-value=82 Score=32.83 Aligned_cols=44 Identities=27% Similarity=0.422 Sum_probs=34.3
Q ss_pred HHHHHHhcCEEEe--CCCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILI--PSRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~--pS~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++ |...|+ ++-..+..|--|.-+|-+.-|++.|
T Consensus 191 l~ell~~sDiv~l~lPlt~~T~~li~~~~~~~mk~ga~lIN~aRG~vVd 239 (317)
T PRK06487 191 LDELLPQVDALTLHCPLTEHTRHLIGARELALMKPGALLINTARGGLVD 239 (317)
T ss_pred HHHHHHhCCEEEECCCCChHHhcCcCHHHHhcCCCCeEEEECCCccccC
Confidence 5679999999986 333344 5667999999999888888888765
No 275
>PF09140 MipZ: ATPase MipZ; InterPro: IPR015223 Cell division in bacteria is facilitated by a polymeric ring structure, the Z ring, composed of tubulin-like FtsZ protofilaments. Correct positioning of the division plane is a prerequisite for the generation of daughter cells with a normal chromosome complement. In Caulobacter crescentus MipZ, an essential protein, coordinates and regulates the assembly of the FtsZ cytokinetic ring during cell division. MipZ, forms a complex with the partitioning protein ParB near the origin of replication and localizes with the duplicated origin regions to the cell poles. MipZ also directly interferes with FtsZ polymerisation, thereby restricting FtsZ ring formation to mid-cell, the region of lowest MipZ concentration. In eukaryotes members of this entry belong to the Mrp/NBP35 ATP-binding protein family, and specifically the NUBP2/CFD1 subfamily. This includes the cytosolic Fe-S cluster assembly factor Cfd1, which is a component of the cytosolic iron-sulphur (Fe/S) protein assembly machinery. This protein is required for maturation of extra-mitochondrial Fe/S proteins. It may bind and transfer a labile 4Fe-4S cluster to target apoproteins. Cfd1 is also required for biogenesis and export of both ribosomal subunits, suggesting a role in assembly of the Fe/S clusters in RLI1, a protein which performs rRNA processing and ribosome export. ; PDB: 2XIT_B 2XJ4_A 2XJ9_A.
Probab=35.02 E-value=43 Score=33.59 Aligned_cols=35 Identities=37% Similarity=0.529 Sum_probs=22.4
Q ss_pred EEEEeccccCccccccHH--HHhhhhHHHHHhCCCeEEEEeec
Q 007224 87 ILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 87 Il~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+.|.++ .||+| +....||-+|+.+|++|-++=..
T Consensus 2 iIvV~sg------KGGvGKSTva~~lA~aLa~~G~kVg~lD~D 38 (261)
T PF09140_consen 2 IIVVGSG------KGGVGKSTVAVNLAVALARMGKKVGLLDLD 38 (261)
T ss_dssp EEEEE-S------STTTTHHHHHHHHHHHHHCTT--EEEEE--
T ss_pred EEEEecC------CCCCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 5555554 45555 56667999999999999999543
No 276
>PF04230 PS_pyruv_trans: Polysaccharide pyruvyl transferase; InterPro: IPR007345 Pyruvyl-transferases are involved in peptidoglycan-associated polymer biosynthesis. CsaB in Bacillus anthracis is necessary for the non-covalent anchoring of proteins containing an SLH (S-layer homology) domain to peptidoglycan-associated pyruvylated polysaccharides. WcaK and AmsJ are involved in the biosynthesis of colanic acid in Escherichia coli and of amylovoran in Erwinia amylovora [, ].
Probab=35.00 E-value=4.3e+02 Score=25.58 Aligned_cols=90 Identities=10% Similarity=0.117 Sum_probs=49.5
Q ss_pred ccCHHHHHHHHHhcccC--CcEEEEEeCCc-hhHHHHHHHHH--HHCCCceEEEe-ccChHHHHHHHHhcCEEEeCCCCC
Q 007224 415 QKGSDILAAAIPHFIKE--NVQIIVLGTGK-KPMEKQLEQLE--ILYPEKARGVA-KFNIPLAHMIIAGADFILIPSRFE 488 (612)
Q Consensus 415 ~Kg~d~ll~a~~~l~~~--~~~lvivG~g~-~~~~~~l~~l~--~~~~~~i~~~~-~~~~~~~~~~l~~adi~l~pS~~E 488 (612)
..-.+.+.+.+..+... .+.++...... ........... .....++.... ..+..+...++++||++|-...+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Is~RlH- 267 (286)
T PF04230_consen 189 EEYIEEIAELIQRLLDKGYKIVLLPFSPSDDDEDDDDFNEIDIKAEKFFNVIIIDYSLSPDELLELISQADLVISMRLH- 267 (286)
T ss_pred hhHHHHHHHHHHHhhcccceeEEEEeeeccchhhHHHHHhhhhhcccccceeEecCCCCHHHHHHHHhcCCEEEecCCH-
Confidence 44455666666666553 33333333322 22222222211 11122233222 33566667899999999976653
Q ss_pred CCcHHHHHHHHcCCceEEcCC
Q 007224 489 PCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 489 ~~gl~~lEAma~G~PvI~s~~ 509 (612)
..+=|+++|+|+|+-+.
T Consensus 268 ----~~I~a~~~g~P~i~i~y 284 (286)
T PF04230_consen 268 ----GAILALSLGVPVIAISY 284 (286)
T ss_pred ----HHHHHHHcCCCEEEEec
Confidence 45569999999998654
No 277
>PRK13933 stationary phase survival protein SurE; Provisional
Probab=34.85 E-value=43 Score=33.71 Aligned_cols=37 Identities=24% Similarity=0.373 Sum_probs=26.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
||||..+..-.. .- -+..|+++|.+ +|+|+|++|...
T Consensus 1 M~ILvtNDDGi~---ap----Gl~aL~~~l~~-~~~V~VvAP~~~ 37 (253)
T PRK13933 1 MNILLTNDDGIN---AE----GINTLAELLSK-YHEVIIVAPENQ 37 (253)
T ss_pred CeEEEEcCCCCC---Ch----hHHHHHHHHHh-CCcEEEEccCCC
Confidence 899999876211 11 26778888865 689999999744
No 278
>PRK05693 short chain dehydrogenase; Provisional
Probab=34.82 E-value=49 Score=33.15 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=24.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..+++.|+++|++|.+++..
T Consensus 1 mk~vlItGa------sggiG---~~la~~l~~~G~~V~~~~r~ 34 (274)
T PRK05693 1 MPVVLITGC------SSGIG---RALADAFKAAGYEVWATARK 34 (274)
T ss_pred CCEEEEecC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 566666542 57777 56778899999999887654
No 279
>PRK13935 stationary phase survival protein SurE; Provisional
Probab=34.62 E-value=44 Score=33.67 Aligned_cols=38 Identities=24% Similarity=0.304 Sum_probs=26.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCc
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQ 130 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~ 130 (612)
||||+.+..-. -+.-+..|..+|++ +|+|+|++|...+
T Consensus 1 M~ILlTNDDGi-------~a~Gi~aL~~~l~~-~~~V~VvAP~~~q 38 (253)
T PRK13935 1 MNILVTNDDGI-------TSPGIIILAEYLSE-KHEVFVVAPDKER 38 (253)
T ss_pred CeEEEECCCCC-------CCHHHHHHHHHHHh-CCcEEEEccCCCC
Confidence 89999887511 12236678888865 5799999998543
No 280
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=34.52 E-value=1.1e+02 Score=32.00 Aligned_cols=44 Identities=30% Similarity=0.438 Sum_probs=34.9
Q ss_pred HHHHHHhcCEEEe--CCCCCCCc---HHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILI--PSRFEPCG---LIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~--pS~~E~~g---l~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++ |...|+.. -..++.|--|.-.|-+.-|++.|
T Consensus 194 l~ell~~sDii~l~~Plt~~T~hLin~~~l~~mk~ga~lVNtaRG~~VD 242 (324)
T COG1052 194 LDELLAESDIISLHCPLTPETRHLINAEELAKMKPGAILVNTARGGLVD 242 (324)
T ss_pred HHHHHHhCCEEEEeCCCChHHhhhcCHHHHHhCCCCeEEEECCCccccC
Confidence 5579999999875 56667654 46899999999888888888665
No 281
>PRK06179 short chain dehydrogenase; Provisional
Probab=34.38 E-value=57 Score=32.56 Aligned_cols=25 Identities=28% Similarity=0.453 Sum_probs=19.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++|++|.+++..
T Consensus 13 sg~iG---~~~a~~l~~~g~~V~~~~r~ 37 (270)
T PRK06179 13 SSGIG---RATAEKLARAGYRVFGTSRN 37 (270)
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46776 56888899999999888754
No 282
>PRK06924 short chain dehydrogenase; Provisional
Probab=34.00 E-value=51 Score=32.40 Aligned_cols=34 Identities=21% Similarity=0.465 Sum_probs=23.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..+++.|+++|++|.+++..
T Consensus 1 ~k~vlItGa------sggiG---~~ia~~l~~~g~~V~~~~r~ 34 (251)
T PRK06924 1 MRYVIITGT------SQGLG---EAIANQLLEKGTHVISISRT 34 (251)
T ss_pred CcEEEEecC------CchHH---HHHHHHHHhcCCEEEEEeCC
Confidence 555555432 46666 66789999999999887643
No 283
>PF02525 Flavodoxin_2: Flavodoxin-like fold; InterPro: IPR003680 This family consists of a domain with a flavodoxin-like fold. The family includes bacterial and eukaryotic NAD(P)H dehydrogenase (quinone) 1.6.99.2 from EC. These enzymes catalyse the NAD(P)H-dependent two-electron reductions of quinones and protect cells against damage by free radicals and reactive oxygen species []. This enzyme uses a FAD cofactor. The equation for this reaction is NAD(P)H + acceptor = NAD(P)(+) + reduced acceptor. This enzyme is also involved in the bioactivation of prodrugs used in chemotherapy []. The family also includes acyl carrier protein phosphodiesterase 3.1.4.14 from EC. This enzyme converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine residue from ACP []. This family is related to FMN_red IPR005025 from INTERPRO and Flavodoxin_1 IPR008254 from INTERPRO.; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0050662 coenzyme binding; PDB: 1T5B_B 1DXQ_B 2B3D_A 2Z9D_B 2Z9C_A 2Z98_A 2D5I_A 2Z9B_A 1TIK_A 1V4B_A ....
Probab=33.94 E-value=57 Score=31.20 Aligned_cols=38 Identities=21% Similarity=0.400 Sum_probs=26.8
Q ss_pred ceEEEEeccccCccccccH-HHHhhhhHHHHHhCC-CeEEEEe
Q 007224 85 LNILFVGTEVAPWSKTGGL-GDVLGGLPPALAANG-HRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~-~~~~~~La~~L~~~G-h~V~vit 125 (612)
||||+|... |.. .++. ......+..++.++| |+|+++=
T Consensus 1 mkiLvI~as--p~~-~~S~s~~l~~~~~~~~~~~~~~~v~~~d 40 (199)
T PF02525_consen 1 MKILVINAS--PRP-EGSFSRALADAFLEGLQEAGPHEVEIRD 40 (199)
T ss_dssp EEEEEEE----SST-TTSHHHHHHHHHHHHHHHHTTSEEEEEE
T ss_pred CEEEEEEcC--CCC-ccCHHHHHHHHHHHHHHHcCCCEEEEEE
Confidence 899999976 541 1455 445566888999999 8998884
No 284
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=33.57 E-value=56 Score=34.20 Aligned_cols=75 Identities=25% Similarity=0.453 Sum_probs=45.8
Q ss_pred CceEEEEeccccCccccccHHH--HhhhhHHHHHhCCCeEEEEeecCC-cccccCCccEEEEEEeCCeeeEEEEEEeeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIAPRYD-QYKDAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~--~~~~La~~L~~~Gh~V~vit~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
.|+|+|++. .||+|. ....+|-.|++.|..|.+++.... +..+.++ ..+++....+. +
T Consensus 1 ~~riv~f~G-------KGGVGKTT~aaA~A~~lA~~g~kvLlvStDPAhsL~d~f~------~elg~~~~~I~------~ 61 (322)
T COG0003 1 MTRIVFFTG-------KGGVGKTTIAAATAVKLAESGKKVLLVSTDPAHSLGDVFD------LELGHDPRKVG------P 61 (322)
T ss_pred CcEEEEEec-------CCcccHHHHHHHHHHHHHHcCCcEEEEEeCCCCchHhhhc------cccCCchhhcC------C
Confidence 378999886 588888 666777889999988888865411 2222222 22332222221 5
Q ss_pred CceEEEEeChhhhhhhhc
Q 007224 161 GVDRVFVDHPWFLAKVVW 178 (612)
Q Consensus 161 gv~~~~l~~~~~~~~~~w 178 (612)
++...-+|....+++ -|
T Consensus 62 nL~a~eiD~~~~l~e-y~ 78 (322)
T COG0003 62 NLDALELDPEKALEE-YW 78 (322)
T ss_pred CCceeeecHHHHHHH-HH
Confidence 777777776555555 44
No 285
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=33.48 E-value=51 Score=35.07 Aligned_cols=35 Identities=23% Similarity=0.302 Sum_probs=26.1
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|||++++ |.|-.=..|+..|.++||+|+.+...
T Consensus 20 ~~~~IlVtG----------gtGfIG~~l~~~L~~~G~~V~~v~r~ 54 (370)
T PLN02695 20 EKLRICITG----------AGGFIASHIARRLKAEGHYIIASDWK 54 (370)
T ss_pred CCCEEEEEC----------CccHHHHHHHHHHHhCCCEEEEEEec
Confidence 579988764 44444467889999999999998743
No 286
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=33.43 E-value=53 Score=32.55 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=25.5
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
++|||++++. +|++| ..+++.|.++||+|++++..
T Consensus 16 ~~~~ilItGa-------sG~iG---~~l~~~L~~~g~~V~~~~R~ 50 (251)
T PLN00141 16 KTKTVFVAGA-------TGRTG---KRIVEQLLAKGFAVKAGVRD 50 (251)
T ss_pred cCCeEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEecC
Confidence 3577877764 46666 55777788899999887644
No 287
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=33.04 E-value=16 Score=40.61 Aligned_cols=27 Identities=26% Similarity=0.294 Sum_probs=21.1
Q ss_pred cHHHHhhhhHHHHHhCCCeEEEEeecC
Q 007224 102 GLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (612)
.--.....++++|+++||+||++++..
T Consensus 11 SH~~~~~~l~~~L~~rGH~VTvl~~~~ 37 (500)
T PF00201_consen 11 SHFIFMRPLAEELAERGHNVTVLTPSP 37 (500)
T ss_dssp -SHHHHHHHHHHHHHH-TTSEEEHHHH
T ss_pred CHHHHHHHHHHHHHhcCCceEEEEeec
Confidence 344567889999999999999999863
No 288
>PRK07308 flavodoxin; Validated
Probab=32.94 E-value=63 Score=29.21 Aligned_cols=26 Identities=23% Similarity=0.231 Sum_probs=23.2
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
+|..+.+...++..|.+.|++|.+.-
T Consensus 12 tGnTe~iA~~ia~~l~~~g~~~~~~~ 37 (146)
T PRK07308 12 TGNTEEIADIVADKLRELGHDVDVDE 37 (146)
T ss_pred CchHHHHHHHHHHHHHhCCCceEEEe
Confidence 69999999999999999999988754
No 289
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=32.73 E-value=61 Score=28.71 Aligned_cols=36 Identities=19% Similarity=0.035 Sum_probs=24.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++.... ++....+.++.+.|.+.|++|.++...
T Consensus 1 k~i~l~vtG-------s~~~~~~~~~l~~L~~~g~~v~vv~S~ 36 (129)
T PF02441_consen 1 KRILLGVTG-------SIAAYKAPDLLRRLKRAGWEVRVVLSP 36 (129)
T ss_dssp -EEEEEE-S-------SGGGGGHHHHHHHHHTTTSEEEEEESH
T ss_pred CEEEEEEEC-------HHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 677777642 222233678899999999999988764
No 290
>PRK06756 flavodoxin; Provisional
Probab=32.71 E-value=71 Score=28.90 Aligned_cols=37 Identities=5% Similarity=0.161 Sum_probs=30.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++|-.+ .+|..+.+...++..|.+.|++|.++-.
T Consensus 2 mkv~IiY~S-----~tGnTe~vA~~ia~~l~~~g~~v~~~~~ 38 (148)
T PRK06756 2 SKLVMIFAS-----MSGNTEEMADHIAGVIRETENEIEVIDI 38 (148)
T ss_pred ceEEEEEEC-----CCchHHHHHHHHHHHHhhcCCeEEEeeh
Confidence 688887543 3799999999999999999999987754
No 291
>CHL00194 ycf39 Ycf39; Provisional
Probab=32.68 E-value=49 Score=34.19 Aligned_cols=33 Identities=24% Similarity=0.456 Sum_probs=23.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|-+| ..|+++|.++||+|.+++..
T Consensus 1 MkIlVtGa-------tG~iG---~~lv~~Ll~~g~~V~~l~R~ 33 (317)
T CHL00194 1 MSLLVIGA-------TGTLG---RQIVRQALDEGYQVRCLVRN 33 (317)
T ss_pred CEEEEECC-------CcHHH---HHHHHHHHHCCCeEEEEEcC
Confidence 67776643 24444 56888899999999999754
No 292
>PRK13185 chlL protochlorophyllide reductase iron-sulfur ATP-binding protein; Provisional
Probab=32.52 E-value=51 Score=33.21 Aligned_cols=25 Identities=28% Similarity=0.391 Sum_probs=20.2
Q ss_pred cHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 102 GLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|-.+.+..||.+|+++|++|.+|=.
T Consensus 14 GKTT~~~nLA~~la~~G~kVLliD~ 38 (270)
T PRK13185 14 GKSTTSSNLSAAFAKLGKKVLQIGC 38 (270)
T ss_pred CHHHHHHHHHHHHHHCCCeEEEEec
Confidence 4445667899999999999999843
No 293
>PRK05246 glutathione synthetase; Provisional
Probab=32.36 E-value=41 Score=35.01 Aligned_cols=40 Identities=15% Similarity=0.176 Sum_probs=31.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+|+-. |.....--.+....|+.+..++||+|.++++.
T Consensus 2 ~~~~~~~~---~~~~~~~~~~st~~l~~aa~~~G~~v~~~~~~ 41 (316)
T PRK05246 2 MKVAFQMD---PIESINIKKDSTFAMMLEAQRRGHELFYYEPD 41 (316)
T ss_pred ceEEEEeC---CHHHCCCCCChHHHHHHHHHHcCCEEEEEehh
Confidence 89999985 43333444455677999999999999999987
No 294
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=32.24 E-value=60 Score=33.36 Aligned_cols=34 Identities=29% Similarity=0.554 Sum_probs=26.5
Q ss_pred ceEEEEeccccCccccccHH--HHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++.+ .||+| +.+..|+.+|+++|++|.+|=.
T Consensus 1 m~ia~~g--------KGGVGKTTta~nLA~~La~~G~rVLlID~ 36 (290)
T CHL00072 1 MKLAVYG--------KGGIGKSTTSCNISIALARRGKKVLQIGC 36 (290)
T ss_pred CeEEEEC--------CCCCcHHHHHHHHHHHHHHCCCeEEEEec
Confidence 7877775 35555 5677899999999999998844
No 295
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=32.12 E-value=61 Score=32.74 Aligned_cols=121 Identities=14% Similarity=-0.046 Sum_probs=68.2
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
.+++.+|+ |.+..+... .....+.+.++ ...+ ..+...++.-...+-+...+.|+.+.-..+++...+=++
T Consensus 131 ~i~lttG~----k~l~~f~~~---~~~~~~~~RvL-P~~~-~l~~~~~~G~~~~~iia~~gPfs~e~n~al~~~~~i~~l 201 (256)
T TIGR00715 131 RVFLTAGA----SWLSHFSLS---QDEAVVFVRVL-PYPQ-ALAQALKLGFPSDRIIAMRGPFSEELEKALLREYRIDAV 201 (256)
T ss_pred cEEEecCc----chHHHHhhc---cCCceEEEEEC-CCch-hhHHHHHcCCChhcEEEEeCCCCHHHHHHHHHHcCCCEE
Confidence 47888887 666666442 21233444454 2221 122233322211234667778888777778876554333
Q ss_pred CCCC--C--CCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHH
Q 007224 484 PSRF--E--PCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 484 pS~~--E--~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll 551 (612)
-+.. + ++--++--|+.+|+|||.-.-+-...- +- .-.+++++.+.+.+++
T Consensus 202 VtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~~~~~------~~------------~~~~~~el~~~l~~~~ 255 (256)
T TIGR00715 202 VTKASGEQGGELEKVKAAEALGINVIRIARPQTIPG------VA------------IFDDISQLNQFVARLL 255 (256)
T ss_pred EEcCCCCccchHHHHHHHHHcCCcEEEEeCCCCCCC------Cc------------cCCCHHHHHHHHHHhc
Confidence 3432 1 344578889999999999886643210 01 1257788877777654
No 296
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=31.96 E-value=5.5e+02 Score=25.96 Aligned_cols=121 Identities=12% Similarity=0.027 Sum_probs=72.5
Q ss_pred CCcEEEEEcCc--ccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc--ChHHHHHHHHh
Q 007224 402 NIPVIGFIGRL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAG 477 (612)
Q Consensus 402 ~~~~il~iGrl--~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~--~~~~~~~~l~~ 477 (612)
+.|++ +.+=+ -.+.|++.+++.+.+. .+.-+++=+-+.+....+.+..++++......+.. +.+.+..+.+.
T Consensus 91 ~~p~v-lm~Y~N~i~~~G~e~F~~~~~~a---GvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~~eri~~i~~~ 166 (263)
T CHL00200 91 KAPIV-IFTYYNPVLHYGINKFIKKISQA---GVKGLIIPDLPYEESDYLISVCNLYNIELILLIAPTSSKSRIQKIARA 166 (263)
T ss_pred CCCEE-EEecccHHHHhCHHHHHHHHHHc---CCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHh
Confidence 34543 44433 3467999999988877 66766766655444556666667777666666655 45677788999
Q ss_pred cCEEEe-CCCCC------CCcHHHHHHH-----HcCCceEEcCCCCcc--c----ceecCceEEEeccc
Q 007224 478 ADFILI-PSRFE------PCGLIQLHAM-----RYGTVPIVASTGGLV--D----TVEEGFTGFQMGSF 528 (612)
Q Consensus 478 adi~l~-pS~~E------~~gl~~lEAm-----a~G~PvI~s~~gg~~--e----~v~~g~~G~l~~~~ 528 (612)
++-||. -|+.- ...-.+.+.. ..++|+++ . .|+. | +...|..|+++|+-
T Consensus 167 a~gFIY~vS~~GvTG~~~~~~~~~~~~i~~ir~~t~~Pi~v-G-FGI~~~e~~~~~~~~GADGvVVGSa 233 (263)
T CHL00200 167 APGCIYLVSTTGVTGLKTELDKKLKKLIETIKKMTNKPIIL-G-FGISTSEQIKQIKGWNINGIVIGSA 233 (263)
T ss_pred CCCcEEEEcCCCCCCCCccccHHHHHHHHHHHHhcCCCEEE-E-CCcCCHHHHHHHHhcCCCEEEECHH
Confidence 983333 24421 1222233333 46888877 3 3333 2 33345789998743
No 297
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=31.88 E-value=75 Score=34.14 Aligned_cols=36 Identities=28% Similarity=0.402 Sum_probs=26.0
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..+|||++++. +|++| ..+++.|.++||+|.+++..
T Consensus 58 ~~~~kVLVtGa-------tG~IG---~~l~~~Ll~~G~~V~~l~R~ 93 (390)
T PLN02657 58 PKDVTVLVVGA-------TGYIG---KFVVRELVRRGYNVVAVARE 93 (390)
T ss_pred CCCCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEEec
Confidence 34678877653 36666 55777889999999988754
No 298
>CHL00175 minD septum-site determining protein; Validated
Probab=31.83 E-value=83 Score=31.87 Aligned_cols=41 Identities=22% Similarity=0.222 Sum_probs=29.0
Q ss_pred cccCCCceEEEEeccccCccccc--cHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 79 IVCGVGLNILFVGTEVAPWSKTG--GLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 79 ~~~~~~MkIl~v~~~~~P~~~~G--G~~~~~~~La~~L~~~Gh~V~vit 125 (612)
+.....+||+.|... .| |-.+.+..|+.+|++.|++|.+|=
T Consensus 9 ~~~~~~~~vi~v~s~------KGGvGKTt~a~nLA~~La~~g~~vlliD 51 (281)
T CHL00175 9 EKSATMSRIIVITSG------KGGVGKTTTTANLGMSIARLGYRVALID 51 (281)
T ss_pred hhcCCCceEEEEEcC------CCCCcHHHHHHHHHHHHHhCCCeEEEEe
Confidence 333334577777654 34 555677889999999999998883
No 299
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=31.80 E-value=53 Score=35.27 Aligned_cols=42 Identities=29% Similarity=0.430 Sum_probs=28.9
Q ss_pred CccccccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 75 PSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 75 ~~~~~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|..++.....++|++|+.- .+|+. +|.+|++.|++|+|+=.+
T Consensus 9 ~~~~~~~~~~~dV~IvGaG------~aGl~-----~A~~L~~~G~~v~v~E~~ 50 (415)
T PRK07364 9 PTLPSTRSLTYDVAIVGGG------IVGLT-----LAAALKDSGLRIALIEAQ 50 (415)
T ss_pred CCCCCCCccccCEEEECcC------HHHHH-----HHHHHhcCCCEEEEEecC
Confidence 3334444446789999753 24555 688899999999999543
No 300
>PRK13232 nifH nitrogenase reductase; Reviewed
Probab=31.79 E-value=48 Score=33.52 Aligned_cols=26 Identities=27% Similarity=0.639 Sum_probs=21.0
Q ss_pred cccHH--HHhhhhHHHHHhCCCeEEEEe
Q 007224 100 TGGLG--DVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 100 ~GG~~--~~~~~La~~L~~~Gh~V~vit 125 (612)
.||+| +.+..||.+|+++|++|.++=
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVllvD 36 (273)
T PRK13232 9 KGGIGKSTTTQNLTAALSTMGNKILLVG 36 (273)
T ss_pred CCCCcHHHHHHHHHHHHHhhCCCeEEEe
Confidence 46555 456789999999999999993
No 301
>PRK14494 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/FeS domain-containing protein protein; Provisional
Probab=31.78 E-value=73 Score=31.58 Aligned_cols=38 Identities=21% Similarity=0.167 Sum_probs=32.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+++.|+.. +..|-.+.+..|+..|.++|++|-++-+.
T Consensus 1 m~vi~ivG~-----~gsGKTtl~~~l~~~L~~~G~~V~viK~~ 38 (229)
T PRK14494 1 MRAIGVIGF-----KDSGKTTLIEKILKNLKERGYRVATAKHT 38 (229)
T ss_pred CeEEEEECC-----CCChHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 788887753 36799999999999999999999999654
No 302
>PLN02928 oxidoreductase family protein
Probab=31.66 E-value=1e+02 Score=32.56 Aligned_cols=45 Identities=22% Similarity=0.253 Sum_probs=33.4
Q ss_pred HHHHHHHhcCEEEeC--CCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 470 LAHMIIAGADFILIP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 470 ~~~~~l~~adi~l~p--S~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
.+.++++.||++++. ...|+ ++-..+..|--|.-+|-+.-|++.|
T Consensus 219 ~L~ell~~aDiVvl~lPlt~~T~~li~~~~l~~Mk~ga~lINvaRG~lVd 268 (347)
T PLN02928 219 DIYEFAGEADIVVLCCTLTKETAGIVNDEFLSSMKKGALLVNIARGGLLD 268 (347)
T ss_pred CHHHHHhhCCEEEECCCCChHhhcccCHHHHhcCCCCeEEEECCCccccC
Confidence 456799999999874 33344 4556888888898888888787664
No 303
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=31.60 E-value=54 Score=32.97 Aligned_cols=37 Identities=22% Similarity=0.248 Sum_probs=27.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
||||+.+..- =.+.-+..|.++|.+. |+|+|++|...
T Consensus 1 M~ILlTNDDG-------i~a~Gi~aL~~~l~~~-~~V~VvAP~~~ 37 (250)
T PRK00346 1 MRILLTNDDG-------IHAPGIRALAEALREL-ADVTVVAPDRE 37 (250)
T ss_pred CeEEEECCCC-------CCChhHHHHHHHHHhC-CCEEEEeCCCC
Confidence 8999988751 1122477888999988 79999999744
No 304
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=31.58 E-value=2.5e+02 Score=26.83 Aligned_cols=40 Identities=15% Similarity=0.063 Sum_probs=27.1
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCCCcccce
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTV 516 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v 516 (612)
..-|++++....+ -..++.||..+|.|+|+- |+....+.+
T Consensus 126 ~~Pdlviv~~~~~-~~~ai~Ea~~l~IP~I~i~Dtn~~~~~i 166 (193)
T cd01425 126 RLPDLVIVLDPRK-EHQAIREASKLGIPVIAIVDTNCDPDLI 166 (193)
T ss_pred cCCCEEEEeCCcc-chHHHHHHHHcCCCEEEEecCCCCCccc
Confidence 4457777665432 378899999999999997 344434333
No 305
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=31.16 E-value=56 Score=34.16 Aligned_cols=33 Identities=33% Similarity=0.368 Sum_probs=25.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |.+| ..++..|+++||+|+++...
T Consensus 2 ~mkI~IiG~--------G~mG---~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 2 MARICVLGA--------GSIG---CYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred CceEEEECC--------CHHH---HHHHHHHHhcCCcEEEEecH
Confidence 389999963 5455 45777899999999998753
No 306
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=31.08 E-value=5.5e+02 Score=25.69 Aligned_cols=96 Identities=11% Similarity=0.074 Sum_probs=54.8
Q ss_pred CHHHHHHHHHhccc-CCcEEEEEeCCc---hhHHHHHHHHHHHCCCceEEEecc-C-----hHHHHHHHHhcCEEEeCC-
Q 007224 417 GSDILAAAIPHFIK-ENVQIIVLGTGK---KPMEKQLEQLEILYPEKARGVAKF-N-----IPLAHMIIAGADFILIPS- 485 (612)
Q Consensus 417 g~d~ll~a~~~l~~-~~~~lvivG~g~---~~~~~~l~~l~~~~~~~i~~~~~~-~-----~~~~~~~l~~adi~l~pS- 485 (612)
+-..+.+.+-++.. ++.+++++.+.. ..+.+...+.-.+++-+......+ + .+...+.+..||++++.-
T Consensus 12 ~~~~i~~~~~~lag~~~~rI~~iptAS~~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~ad~I~~~GG 91 (250)
T TIGR02069 12 GDREILREFVSRAGGEDAIIVIITSASEEPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNATGIFFTGG 91 (250)
T ss_pred ChHHHHHHHHHHhCCCCceEEEEeCCCCChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhCCEEEEeCC
Confidence 33445555544433 567888887633 223333334334444322222222 1 233446889999998863
Q ss_pred -------CCCCCcH--HHHHHHHcCCceEEcCCCCc
Q 007224 486 -------RFEPCGL--IQLHAMRYGTVPIVASTGGL 512 (612)
Q Consensus 486 -------~~E~~gl--~~lEAma~G~PvI~s~~gg~ 512 (612)
.++..++ .+-++...|+|++.++-|.+
T Consensus 92 nq~~l~~~l~~t~l~~~l~~~~~~G~vi~G~SAGA~ 127 (250)
T TIGR02069 92 DQLRITSLLGDTPLLDRLRKRVHEGIILGGTSAGAA 127 (250)
T ss_pred CHHHHHHHHcCCcHHHHHHHHHHcCCeEEEccHHHH
Confidence 2344454 46688889999999998775
No 307
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=30.96 E-value=1.3e+02 Score=31.49 Aligned_cols=44 Identities=30% Similarity=0.427 Sum_probs=33.6
Q ss_pred HHHHHHhcCEEEe--CCCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILI--PSRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~--pS~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++ |..-|+ ++-..++.|--|.-+|-+.-|++.|
T Consensus 194 l~ell~~sDvv~lh~plt~~T~~li~~~~l~~mk~ga~lIN~aRG~vVd 242 (323)
T PRK15409 194 LDTLLQESDFVCIILPLTDETHHLFGAEQFAKMKSSAIFINAGRGPVVD 242 (323)
T ss_pred HHHHHHhCCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECCCccccC
Confidence 4568999999876 444444 4556999999999899888888664
No 308
>PF02635 DrsE: DsrE/DsrF-like family; InterPro: IPR003787 Four small, soluble proteins (DsrE, DsrF, DsrH and DsrC) are encoded in the dsr gene region of the phototrophic sulphur bacterium Chromatium vinosum D. The dsrAB genes encoding dissimilatory sulphite reductase are part of the gene cluster, dsrABEFHCMK. The remaining proteins that are encoded are a transmembrane protein (DsrM) with similarity to haem-b-binding polypeptides and a soluble protein (DsrK) resembling [4Fe-4S]-cluster-containing heterodisulphide reductase from methanogenic archaea. DsrE is a small soluble protein involved in intracellular sulphur reduction [].; PDB: 1L1S_A 2HYB_B 2HY5_B 2PD2_B 3MC3_A 2D1P_H 1JX7_B 2FB6_A.
Probab=30.92 E-value=1e+02 Score=26.16 Aligned_cols=40 Identities=25% Similarity=0.345 Sum_probs=28.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCC---CeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG---HRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G---h~V~vit~~ 127 (612)
||+++|... .|+ ..........++..+...| ++|.|+...
T Consensus 1 k~v~~i~~~-~p~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~g 43 (122)
T PF02635_consen 1 KKVFFIVTS-GPY--DDERAKIALRLANAAAAMGDYGHDVVVFFHG 43 (122)
T ss_dssp EEEEEEE-S--TT--TBSHHHHHHHHHHHHHHTTHTTSEEEEEE-G
T ss_pred CEEEEEecC-CCC--CCHHHHHHHHHHHHHHHcCCCCCcEEEEEEc
Confidence 688888875 453 2233667777888999999 999998865
No 309
>PRK06753 hypothetical protein; Provisional
Probab=30.52 E-value=44 Score=35.29 Aligned_cols=31 Identities=29% Similarity=0.544 Sum_probs=23.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++|+.. .+|+. +|..|+++|++|+|+=.
T Consensus 1 ~~V~IvGgG------~aGl~-----~A~~L~~~g~~v~v~E~ 31 (373)
T PRK06753 1 MKIAIIGAG------IGGLT-----AAALLQEQGHEVKVFEK 31 (373)
T ss_pred CEEEEECCC------HHHHH-----HHHHHHhCCCcEEEEec
Confidence 789998753 24555 78889999999998843
No 310
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=30.47 E-value=57 Score=33.78 Aligned_cols=32 Identities=28% Similarity=0.486 Sum_probs=23.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++++. +|++| ..|++.|.++||+|+++..
T Consensus 1 m~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~~ 32 (338)
T PRK10675 1 MRVLVTGG-------SGYIG---SHTCVQLLQNGHDVVILDN 32 (338)
T ss_pred CeEEEECC-------CChHH---HHHHHHHHHCCCeEEEEec
Confidence 67776653 35555 5577889999999998753
No 311
>PRK13235 nifH nitrogenase reductase; Reviewed
Probab=30.35 E-value=57 Score=32.99 Aligned_cols=26 Identities=31% Similarity=0.570 Sum_probs=21.1
Q ss_pred cccHHH--HhhhhHHHHHhCCCeEEEEe
Q 007224 100 TGGLGD--VLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 100 ~GG~~~--~~~~La~~L~~~Gh~V~vit 125 (612)
.||+|. .+..|+.+|+++|++|.+|=
T Consensus 9 KGGVGKTT~~~nLA~~La~~G~rVLlID 36 (274)
T PRK13235 9 KGGIGKSTTTQNTVAGLAEMGKKVMVVG 36 (274)
T ss_pred CCCccHHHHHHHHHHHHHHCCCcEEEEe
Confidence 466654 56779999999999999994
No 312
>TIGR01968 minD_bact septum site-determining protein MinD. This model describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.
Probab=30.34 E-value=59 Score=32.23 Aligned_cols=24 Identities=33% Similarity=0.390 Sum_probs=19.8
Q ss_pred cHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 102 GLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit 125 (612)
|-.+.+..||.+|++.|++|.++=
T Consensus 14 GKTt~a~~lA~~la~~g~~vlliD 37 (261)
T TIGR01968 14 GKTTTTANLGTALARLGKKVVLID 37 (261)
T ss_pred cHHHHHHHHHHHHHHcCCeEEEEE
Confidence 444577889999999999999884
No 313
>PRK13934 stationary phase survival protein SurE; Provisional
Probab=30.31 E-value=57 Score=33.07 Aligned_cols=37 Identities=22% Similarity=0.194 Sum_probs=27.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
||||+.+..-. .+.-+..|.++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDDGi-------~apGi~aL~~al~~~g-~V~VvAP~~e 37 (266)
T PRK13934 1 MKILVTNDDGV-------HSPGLRLLYEFVSPLG-EVDVVAPETP 37 (266)
T ss_pred CeEEEEcCCCC-------CCHHHHHHHHHHHhCC-cEEEEccCCC
Confidence 88999887521 1234667888888887 8999999744
No 314
>PLN02240 UDP-glucose 4-epimerase
Probab=30.20 E-value=66 Score=33.57 Aligned_cols=34 Identities=29% Similarity=0.382 Sum_probs=24.2
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
+.++||++++. +|++| ..|++.|.++||+|+++.
T Consensus 3 ~~~~~vlItGa-------tG~iG---~~l~~~L~~~g~~V~~~~ 36 (352)
T PLN02240 3 LMGRTILVTGG-------AGYIG---SHTVLQLLLAGYKVVVID 36 (352)
T ss_pred CCCCEEEEECC-------CChHH---HHHHHHHHHCCCEEEEEe
Confidence 34567766543 46666 557788999999998886
No 315
>PRK07577 short chain dehydrogenase; Provisional
Probab=30.09 E-value=73 Score=30.81 Aligned_cols=35 Identities=37% Similarity=0.519 Sum_probs=24.3
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..++|++++. +||+| ..+++.|+++|++|.++...
T Consensus 2 ~~k~vlItG~-------s~~iG---~~ia~~l~~~G~~v~~~~r~ 36 (234)
T PRK07577 2 SSRTVLVTGA-------TKGIG---LALSLRLANLGHQVIGIARS 36 (234)
T ss_pred CCCEEEEECC-------CCcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3456665543 46666 55788899999999888654
No 316
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=29.95 E-value=66 Score=31.67 Aligned_cols=33 Identities=27% Similarity=0.590 Sum_probs=24.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+|++++. +||+| ..+++.|.+.|++|.+++..
T Consensus 1 ~~vlItGa-------sg~iG---~~la~~l~~~G~~V~~~~r~ 33 (248)
T PRK10538 1 MIVLVTGA-------TAGFG---ECITRRFIQQGHKVIATGRR 33 (248)
T ss_pred CEEEEECC-------CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 56666553 47777 45788899999999887654
No 317
>TIGR03012 sulf_tusD_dsrE sulfur relay protein TusD/DsrE. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=29.67 E-value=90 Score=27.75 Aligned_cols=39 Identities=18% Similarity=0.210 Sum_probs=27.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeE-EEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V-~vit~~ 127 (612)
|++++... +|+ .+-.++-...++.++.+.||+| .|+-..
T Consensus 1 ~~~iv~~~-~P~--~~~~~~~al~~A~aa~~~gh~v~~vFf~~ 40 (127)
T TIGR03012 1 KYTLLVTG-PPY--GTQAASSAYQFAQALLAKGHEIVRVFFYQ 40 (127)
T ss_pred CEEEEEeC-CCC--CcHHHHHHHHHHHHHHHCCCcEEEEEEeh
Confidence 45566554 575 5557778888999999999995 666443
No 318
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=29.61 E-value=67 Score=31.29 Aligned_cols=34 Identities=24% Similarity=0.291 Sum_probs=23.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 1 ~~~~lItGa------~g~iG---~~l~~~l~~~g~~v~~~~~~ 34 (247)
T PRK09730 1 MAIALVTGG------SRGIG---RATALLLAQEGYTVAVNYQQ 34 (247)
T ss_pred CCEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 566666532 45666 56888899999999876544
No 319
>PRK05920 aromatic acid decarboxylase; Validated
Probab=29.48 E-value=94 Score=30.21 Aligned_cols=36 Identities=22% Similarity=0.092 Sum_probs=26.7
Q ss_pred CceEEEEeccccCccccccHH-HHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~-~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
++||++-.+ ||.+ .....+.+.|.+.|++|.++...
T Consensus 3 ~krIllgIT--------Gsiaa~ka~~lvr~L~~~g~~V~vi~T~ 39 (204)
T PRK05920 3 MKRIVLAIT--------GASGAIYGVRLLECLLAADYEVHLVISK 39 (204)
T ss_pred CCEEEEEEe--------CHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 567777653 3333 45667899999999999999865
No 320
>PRK06101 short chain dehydrogenase; Provisional
Probab=29.45 E-value=70 Score=31.32 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=23.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+.++|+.- +||+| ..+++.|+++|++|.++...
T Consensus 1 ~~~vlItGa------s~giG---~~la~~L~~~G~~V~~~~r~ 34 (240)
T PRK06101 1 MTAVLITGA------TSGIG---KQLALDYAKQGWQVIACGRN 34 (240)
T ss_pred CcEEEEEcC------CcHHH---HHHHHHHHhCCCEEEEEECC
Confidence 455556532 46777 66888899999998887643
No 321
>PHA02519 plasmid partition protein SopA; Reviewed
Probab=29.27 E-value=65 Score=34.65 Aligned_cols=37 Identities=30% Similarity=0.297 Sum_probs=27.6
Q ss_pred CCceEEEEeccccCccccccHH--HHhhhhHHHHHhCCCeEEEEe
Q 007224 83 VGLNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit 125 (612)
++++|+-|... .||+| +.+..||.+|+.+|++|.+|=
T Consensus 104 ~~~~vIav~n~------KGGVGKTTta~nLA~~LA~~G~rVLlID 142 (387)
T PHA02519 104 KNPVVLAVMSH------KGGVYKTSSAVHTAQWLALQGHRVLLIE 142 (387)
T ss_pred CCceEEEEecC------CCCCcHHHHHHHHHHHHHhCCCcEEEEe
Confidence 45777766643 56655 456779999999999999883
No 322
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=28.83 E-value=82 Score=30.87 Aligned_cols=35 Identities=34% Similarity=0.525 Sum_probs=27.8
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+.+|++++.. .||+| +.|+.++++.|++|...+.+
T Consensus 7 ~k~VlItgcs------~GGIG---~ala~ef~~~G~~V~AtaR~ 41 (289)
T KOG1209|consen 7 PKKVLITGCS------SGGIG---YALAKEFARNGYLVYATARR 41 (289)
T ss_pred CCeEEEeecC------Ccchh---HHHHHHHHhCCeEEEEEccc
Confidence 4566666643 69999 78999999999999887765
No 323
>TIGR00639 PurN phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent. In phylogenetic analyses, the member from Saccharomyces cerevisiae shows a long branch length but membership in the family, while the formyltetrahydrofolate deformylases form a closely related outgroup.
Probab=28.61 E-value=1.9e+02 Score=27.78 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=22.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCC--eEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh--~V~vit~~ 127 (612)
|||+++.+ |-|.....+..++.+.++ +|.++.+.
T Consensus 1 ~riail~s---------g~gs~~~~ll~~~~~~~l~~~I~~vi~~ 36 (190)
T TIGR00639 1 KRIVVLIS---------GNGSNLQAIIDACKEGKIPASVVLVISN 36 (190)
T ss_pred CeEEEEEc---------CCChhHHHHHHHHHcCCCCceEEEEEEC
Confidence 68888863 344567788888887766 55555444
No 324
>PRK08163 salicylate hydroxylase; Provisional
Probab=28.54 E-value=56 Score=34.84 Aligned_cols=33 Identities=33% Similarity=0.427 Sum_probs=25.5
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
++++|++|+.. .+|+. +|.+|++.|++|+|+=.
T Consensus 3 ~~~~V~IvGaG------iaGl~-----~A~~L~~~g~~v~v~Er 35 (396)
T PRK08163 3 KVTPVLIVGGG------IGGLA-----AALALARQGIKVKLLEQ 35 (396)
T ss_pred CCCeEEEECCc------HHHHH-----HHHHHHhCCCcEEEEee
Confidence 46899999854 35655 77889999999999843
No 325
>PRK08703 short chain dehydrogenase; Provisional
Probab=28.39 E-value=85 Score=30.58 Aligned_cols=25 Identities=36% Similarity=0.530 Sum_probs=19.4
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 15 sggiG---~~la~~l~~~g~~V~~~~r~ 39 (239)
T PRK08703 15 SQGLG---EQVAKAYAAAGATVILVARH 39 (239)
T ss_pred CCcHH---HHHHHHHHHcCCEEEEEeCC
Confidence 57777 45788899999998887654
No 326
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=28.34 E-value=6.4e+02 Score=25.55 Aligned_cols=99 Identities=10% Similarity=-0.033 Sum_probs=47.4
Q ss_pred CHHHHHHHHHhcccCC-cEE-EEEeCCch---hHHHHHHHHHHHCCCceEEEeccChHHHH----HHHHhcCEEEeCCCC
Q 007224 417 GSDILAAAIPHFIKEN-VQI-IVLGTGKK---PMEKQLEQLEILYPEKARGVAKFNIPLAH----MIIAGADFILIPSRF 487 (612)
Q Consensus 417 g~d~ll~a~~~l~~~~-~~l-vivG~g~~---~~~~~l~~l~~~~~~~i~~~~~~~~~~~~----~~l~~adi~l~pS~~ 487 (612)
-+..-++.+.++. |+ =++ ++..+... ...+.+++...+++.++....--+.+... .+-...|+++++...
T Consensus 116 ~~~~~l~l~~~l~-P~~k~igvl~~~~~~~~~~~~~~~~~~a~~~g~~l~~~~v~~~~~~~~~~~~l~~~~da~~~~~~~ 194 (294)
T PF04392_consen 116 PIEKQLELIKKLF-PDAKRIGVLYDPSEPNSVAQIEQLRKAAKKLGIELVEIPVPSSEDLEQALEALAEKVDALYLLPDN 194 (294)
T ss_dssp -HHHHHHHHHHHS-TT--EEEEEEETT-HHHHHHHHHHHHHHHHTT-EEEEEEESSGGGHHHHHHHHCTT-SEEEE-S-H
T ss_pred CHHHHHHHHHHhC-CCCCEEEEEecCCCccHHHHHHHHHHHHHHcCCEEEEEecCcHhHHHHHHHHhhccCCEEEEECCc
Confidence 3444445444442 22 234 34444432 34556666677777545433322333333 244567888777532
Q ss_pred ---CCCcHHHHHHHHcCCceEEcCCCCcccceecCc
Q 007224 488 ---EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF 520 (612)
Q Consensus 488 ---E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~ 520 (612)
..+...+..+..+++|+++++ ...+.+|.
T Consensus 195 ~~~~~~~~i~~~~~~~~iPv~~~~----~~~v~~Ga 226 (294)
T PF04392_consen 195 LVDSNFEAILQLANEAKIPVFGSS----DFYVKAGA 226 (294)
T ss_dssp HHHHTHHHHHHHCCCTT--EEESS----HHHHCTT-
T ss_pred chHhHHHHHHHHHHhcCCCEEECC----HHHhcCCc
Confidence 344455667778999999986 34455553
No 327
>PRK07806 short chain dehydrogenase; Provisional
Probab=28.34 E-value=83 Score=30.78 Aligned_cols=34 Identities=26% Similarity=0.407 Sum_probs=23.5
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
++++|++++. .||+| ..+++.|+++||+|.++..
T Consensus 5 ~~k~vlItGa-------sggiG---~~l~~~l~~~G~~V~~~~r 38 (248)
T PRK07806 5 PGKTALVTGS-------SRGIG---ADTAKILAGAGAHVVVNYR 38 (248)
T ss_pred CCcEEEEECC-------CCcHH---HHHHHHHHHCCCEEEEEeC
Confidence 3455555543 47888 4567789999999987654
No 328
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=28.33 E-value=63 Score=35.10 Aligned_cols=35 Identities=17% Similarity=0.064 Sum_probs=25.6
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|..|||.+|+..+ -| ..++..|+++||+|+++-..
T Consensus 1 m~~~kI~VIGlG~------~G-----~~~A~~La~~G~~V~~~D~~ 35 (415)
T PRK11064 1 MSFETISVIGLGY------IG-----LPTAAAFASRQKQVIGVDIN 35 (415)
T ss_pred CCccEEEEECcch------hh-----HHHHHHHHhCCCEEEEEeCC
Confidence 4458999997531 12 44889999999999988643
No 329
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=28.23 E-value=69 Score=33.38 Aligned_cols=33 Identities=30% Similarity=0.466 Sum_probs=25.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |..| ..++..|++.||+|+++...
T Consensus 4 ~m~I~iIG~--------G~mG---~~ia~~L~~~G~~V~~~~r~ 36 (328)
T PRK14618 4 GMRVAVLGA--------GAWG---TALAVLAASKGVPVRLWARR 36 (328)
T ss_pred CCeEEEECc--------CHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 589999963 3333 55788899999999998764
No 330
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=28.15 E-value=6.3e+02 Score=25.38 Aligned_cols=156 Identities=18% Similarity=0.160 Sum_probs=72.3
Q ss_pred eCCCccCccCCCCccccccccCcch---hhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccC
Q 007224 355 VNGMDVQEWNPLTDKYIGVKYDAST---VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKE 431 (612)
Q Consensus 355 ~Ngvd~~~~~p~~~~~~~~~~~~~~---~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~ 431 (612)
+-|--+..|+|...+||...-+..- +.+.....+.++.---.... +.-.|+|+|.= ..+.+.+.+.+.+.-..
T Consensus 15 HfGhqtr~wnpkm~~fIf~~RngihIIDL~kT~~~l~~A~~~v~~~~~--~~g~ILfVgTK--~~a~~~V~~~A~r~g~~ 90 (252)
T COG0052 15 HFGHQTRRWNPKMKPFIFGERNGIHIIDLQKTLERLREAYKFLRRIAA--NGGKILFVGTK--KQAQEPVKEFAERTGAY 90 (252)
T ss_pred cccccccccCCcccccceeecCCcEEEEHHHHHHHHHHHHHHHHHHHc--CCCEEEEEech--HHHHHHHHHHHHHhCCc
Confidence 3444556666666666554433222 22222333333221112221 22478898863 44556666666666333
Q ss_pred CcEEEEEeCCc---hhHHHHHHHHH---HHCCCceEEEeccCh-------HHHHHHHH-------hcCEEEeCC-CCCCC
Q 007224 432 NVQIIVLGTGK---KPMEKQLEQLE---ILYPEKARGVAKFNI-------PLAHMIIA-------GADFILIPS-RFEPC 490 (612)
Q Consensus 432 ~~~lvivG~g~---~~~~~~l~~l~---~~~~~~i~~~~~~~~-------~~~~~~l~-------~adi~l~pS-~~E~~ 490 (612)
-+.=-++|.-- +.....++.+. ....+.+..+.+-.. +.+...+. --|++++.- +.|
T Consensus 91 yV~~RwLgG~LTN~~ti~~si~rl~~lE~~~~~~~~~~tKkE~l~l~re~~kL~k~lgGIk~m~~~Pd~l~ViDp~~e-- 168 (252)
T COG0052 91 YVNGRWLGGMLTNFKTIRKSIKRLKELEKMEEDGFDGLTKKEALMLTRELEKLEKSLGGIKDMKGLPDVLFVIDPRKE-- 168 (252)
T ss_pred eecCcccCccccCchhHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHHHhhcchhhccCCCCEEEEeCCcHh--
Confidence 33333455421 22333344443 222222222221100 00111111 145555432 222
Q ss_pred cHHHHHHHHcCCceEEc-CCCCcccce
Q 007224 491 GLIQLHAMRYGTVPIVA-STGGLVDTV 516 (612)
Q Consensus 491 gl~~lEAma~G~PvI~s-~~gg~~e~v 516 (612)
-.++.||--+|.|||+- |+..-++.|
T Consensus 169 ~iAv~EA~klgIPVvAlvDTn~dpd~V 195 (252)
T COG0052 169 KIAVKEANKLGIPVVALVDTNCDPDGV 195 (252)
T ss_pred HHHHHHHHHcCCCEEEEecCCCCCccC
Confidence 47899999999999997 566666655
No 331
>PRK07023 short chain dehydrogenase; Provisional
Probab=28.11 E-value=77 Score=30.97 Aligned_cols=33 Identities=27% Similarity=0.484 Sum_probs=24.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+|++++. .||+| ..+++.|++.|++|.+++.+
T Consensus 2 ~~vlItGa-------sggiG---~~ia~~l~~~G~~v~~~~r~ 34 (243)
T PRK07023 2 VRAIVTGH-------SRGLG---AALAEQLLQPGIAVLGVARS 34 (243)
T ss_pred ceEEEecC-------CcchH---HHHHHHHHhCCCEEEEEecC
Confidence 56666553 47777 56777899999999887644
No 332
>PRK08177 short chain dehydrogenase; Provisional
Probab=28.08 E-value=77 Score=30.64 Aligned_cols=34 Identities=24% Similarity=0.277 Sum_probs=24.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.. .||+| ..+++.|+++|++|.+++..
T Consensus 1 ~k~vlItG~------sg~iG---~~la~~l~~~G~~V~~~~r~ 34 (225)
T PRK08177 1 KRTALIIGA------SRGLG---LGLVDRLLERGWQVTATVRG 34 (225)
T ss_pred CCEEEEeCC------CchHH---HHHHHHHHhCCCEEEEEeCC
Confidence 455566532 46666 55788899999999888755
No 333
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=28.05 E-value=90 Score=30.96 Aligned_cols=26 Identities=35% Similarity=0.369 Sum_probs=21.2
Q ss_pred cHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 102 GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|-.+.+..|+.+|+++|-.|.+|=..
T Consensus 14 GKTT~~~~LAs~la~~G~~V~lIDaD 39 (231)
T PF07015_consen 14 GKTTAAMALASELAARGARVALIDAD 39 (231)
T ss_pred cHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 45567778999999999999999544
No 334
>PRK01372 ddl D-alanine--D-alanine ligase; Reviewed
Probab=28.02 E-value=86 Score=32.11 Aligned_cols=44 Identities=11% Similarity=-0.052 Sum_probs=30.9
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.+|||++++....|. ..=.-.....+.++|.+.||+|.++-..
T Consensus 2 ~~~~~v~~~~g~~~~~--~~~~~~s~~~i~~al~~~g~~v~~i~~~ 45 (304)
T PRK01372 2 KMFGKVAVLMGGTSAE--REVSLNSGAAVLAALREAGYDAHPIDPG 45 (304)
T ss_pred CCCcEEEEEeCCCCCC--ceEeHHhHHHHHHHHHHCCCEEEEEecC
Confidence 3456999998665554 2212224578999999999999999654
No 335
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=27.67 E-value=61 Score=33.25 Aligned_cols=32 Identities=28% Similarity=0.468 Sum_probs=25.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||.||. +|.+=..++..|.++||+|+++-..
T Consensus 1 ~kIafIG-----------LG~MG~pmA~~L~~aG~~v~v~~r~ 32 (286)
T COG2084 1 MKIAFIG-----------LGIMGSPMAANLLKAGHEVTVYNRT 32 (286)
T ss_pred CeEEEEc-----------CchhhHHHHHHHHHCCCEEEEEeCC
Confidence 5788885 3444467999999999999999654
No 336
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=27.48 E-value=71 Score=32.42 Aligned_cols=26 Identities=31% Similarity=0.714 Sum_probs=20.8
Q ss_pred cccHH--HHhhhhHHHHHhCCCeEEEEe
Q 007224 100 TGGLG--DVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 100 ~GG~~--~~~~~La~~L~~~Gh~V~vit 125 (612)
.||+| +.+..||.+|+++|++|.+|=
T Consensus 9 KGGVGKTT~a~nLA~~La~~G~rVLliD 36 (279)
T PRK13230 9 KGGIGKSTTVCNIAAALAESGKKVLVVG 36 (279)
T ss_pred CCCCcHHHHHHHHHHHHHhCCCEEEEEe
Confidence 36555 556779999999999999884
No 337
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=27.39 E-value=76 Score=33.22 Aligned_cols=34 Identities=29% Similarity=0.264 Sum_probs=24.8
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
++|+|++.+. .|++| ..+++.|.++||+|+++..
T Consensus 3 ~~k~ilItGa-------tG~IG---~~l~~~L~~~G~~V~~~~r 36 (349)
T TIGR02622 3 QGKKVLVTGH-------TGFKG---SWLSLWLLELGAEVYGYSL 36 (349)
T ss_pred CCCEEEEECC-------CChhH---HHHHHHHHHCCCEEEEEeC
Confidence 3567766653 46666 6688889999999988763
No 338
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=27.26 E-value=71 Score=29.57 Aligned_cols=37 Identities=41% Similarity=0.505 Sum_probs=30.4
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecC
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (612)
+++||++|+. +-+.++.++...++..|.+|.+++|..
T Consensus 1 ~gl~i~~vGD---------~~~rv~~Sl~~~~~~~g~~~~~~~P~~ 37 (158)
T PF00185_consen 1 KGLKIAYVGD---------GHNRVAHSLIELLAKFGMEVVLIAPEG 37 (158)
T ss_dssp TTEEEEEESS---------TTSHHHHHHHHHHHHTTSEEEEESSGG
T ss_pred CCCEEEEECC---------CCChHHHHHHHHHHHcCCEEEEECCCc
Confidence 3688999873 235688999999999999999999974
No 339
>TIGR01754 flav_RNR ribonucleotide reductase-associated flavodoxin, putative. This model represents a family of proteins found immediately downstream of ribonucleotide reductase genes in Xyella fastidiosa and some Gram-positive bacteria. It appears to be a highly divergent flavodoxin of the short chain type, more like the flavodoxins of the sulfate-reducing genus Desulfovibrio than like the NifF flavodoxins associated with nitrogen fixation.
Probab=27.17 E-value=90 Score=27.99 Aligned_cols=34 Identities=24% Similarity=0.263 Sum_probs=27.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMT 123 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~v 123 (612)
|||++|-.+ .+|....++..++..|.+.|++|.+
T Consensus 1 M~i~IiY~S-----~tGnTe~iA~~ia~~l~~~g~~v~~ 34 (140)
T TIGR01754 1 MRILLAYLS-----LSGNTEEVAFMIQDYLQKDGHEVDI 34 (140)
T ss_pred CeEEEEEEC-----CCChHHHHHHHHHHHHhhCCeeEEe
Confidence 787777532 4788999999999999999999874
No 340
>PRK08105 flavodoxin; Provisional
Probab=27.15 E-value=89 Score=28.56 Aligned_cols=27 Identities=26% Similarity=0.204 Sum_probs=24.4
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
+|-.+.+...|+..|.++|++|.++..
T Consensus 12 tGnte~~A~~l~~~l~~~g~~~~~~~~ 38 (149)
T PRK08105 12 YGNALLVAEEAEAILTAQGHEVTLFED 38 (149)
T ss_pred chHHHHHHHHHHHHHHhCCCceEEech
Confidence 789999999999999999999998764
No 341
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=27.01 E-value=4.3e+02 Score=23.13 Aligned_cols=80 Identities=18% Similarity=0.059 Sum_probs=53.0
Q ss_pred ceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEecccccccCCCC
Q 007224 459 KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 459 ~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~~~~~~~~~v~ 536 (612)
.+......+.+...+.++.+|+++..+.. .+.-.+++++ -++-.|++...|+..+--+ ...|+.+- -+.
T Consensus 20 ~v~~~~~~~~~~~~~~l~~~d~ii~~~~~-~~~~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~-------n~~ 90 (133)
T PF00389_consen 20 EVEFCDSPSEEELAERLKDADAIIVGSGT-PLTAEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVT-------NVP 90 (133)
T ss_dssp EEEEESSSSHHHHHHHHTTESEEEESTTS-TBSHHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEE-------E-T
T ss_pred eEEEeCCCCHHHHHHHhCCCeEEEEcCCC-CcCHHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEE-------EeC
Confidence 36666666778888899999999985543 5788889888 8888999988886543211 23455441 113
Q ss_pred CCCHHHHHHHH
Q 007224 537 PVDVAAVSTTV 547 (612)
Q Consensus 537 ~~d~~~la~~l 547 (612)
....+++|+..
T Consensus 91 g~~~~aVAE~a 101 (133)
T PF00389_consen 91 GYNAEAVAEHA 101 (133)
T ss_dssp TTTHHHHHHHH
T ss_pred CcCCcchhccc
Confidence 45666777666
No 342
>PRK12746 short chain dehydrogenase; Provisional
Probab=26.95 E-value=85 Score=30.84 Aligned_cols=25 Identities=28% Similarity=0.385 Sum_probs=19.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 15 sg~iG---~~la~~l~~~G~~v~i~~~r 39 (254)
T PRK12746 15 SRGIG---RAIAMRLANDGALVAIHYGR 39 (254)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 47777 56788899999999776543
No 343
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=26.91 E-value=1.1e+02 Score=30.80 Aligned_cols=39 Identities=18% Similarity=0.243 Sum_probs=29.6
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
+.|++.|++. .| .-|..+.+..||.+|++.|++|.+|=.
T Consensus 102 ~~~vi~vts~-~~---g~Gktt~a~nLA~~la~~g~~VllID~ 140 (274)
T TIGR03029 102 GRKALAVVSA-KS---GEGCSYIAANLAIVFSQLGEKTLLIDA 140 (274)
T ss_pred CCeEEEEECC-CC---CCCHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 4566666543 13 568888899999999999999999843
No 344
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=26.88 E-value=82 Score=30.01 Aligned_cols=31 Identities=35% Similarity=0.560 Sum_probs=21.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||..++..| =|+ -+|..|++.||+|+.+=.
T Consensus 1 M~I~ViGlGy------vGl-----~~A~~lA~~G~~V~g~D~ 31 (185)
T PF03721_consen 1 MKIAVIGLGY------VGL-----PLAAALAEKGHQVIGVDI 31 (185)
T ss_dssp -EEEEE--ST------THH-----HHHHHHHHTTSEEEEE-S
T ss_pred CEEEEECCCc------chH-----HHHHHHHhCCCEEEEEeC
Confidence 8999998653 122 378899999999998843
No 345
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=26.85 E-value=2.6e+02 Score=30.06 Aligned_cols=82 Identities=16% Similarity=0.201 Sum_probs=55.1
Q ss_pred CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc--------ChHHHHHHHHhcCEEE--eCCCCC----CC---cHH
Q 007224 431 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--------NIPLAHMIIAGADFIL--IPSRFE----PC---GLI 493 (612)
Q Consensus 431 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~--------~~~~~~~~l~~adi~l--~pS~~E----~~---gl~ 493 (612)
.+-.+-|+|-|. +-+.+.+....++-++...-.. ....+.++++.||+++ .|...+ +. +-.
T Consensus 115 ~gktvGIIG~G~--IG~~vA~~l~a~G~~V~~~dp~~~~~~~~~~~~~L~ell~~sDiI~lh~PLt~~g~~~T~~li~~~ 192 (378)
T PRK15438 115 HDRTVGIVGVGN--VGRRLQARLEALGIKTLLCDPPRADRGDEGDFRSLDELVQEADILTFHTPLFKDGPYKTLHLADEK 192 (378)
T ss_pred CCCEEEEECcCH--HHHHHHHHHHHCCCEEEEECCcccccccccccCCHHHHHhhCCEEEEeCCCCCCcccccccccCHH
Confidence 466788888887 5666666666666445443211 0112557999999998 565443 44 456
Q ss_pred HHHHHHcCCceEEcCCCCccc
Q 007224 494 QLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 494 ~lEAma~G~PvI~s~~gg~~e 514 (612)
.+++|.-|.-+|-+.-|++.|
T Consensus 193 ~l~~mk~gailIN~aRG~vVD 213 (378)
T PRK15438 193 LIRSLKPGAILINACRGAVVD 213 (378)
T ss_pred HHhcCCCCcEEEECCCchhcC
Confidence 889999999999988888665
No 346
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=26.84 E-value=5.8e+02 Score=24.79 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=52.0
Q ss_pred ccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCCCce---EEEecc-ChHHHHHHHHhcCEEEeCCCCCC
Q 007224 415 QKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKA---RGVAKF-NIPLAHMIIAGADFILIPSRFEP 489 (612)
Q Consensus 415 ~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~i---~~~~~~-~~~~~~~~l~~adi~l~pS~~E~ 489 (612)
.|=...|..|+.-+.. ..-+++++|+.+. ....+++.+...+... ++.++. ..... .-+..=|++++..-. .
T Consensus 49 ~kT~~~L~~A~~~i~~~~~~~ILfVgTk~~-~~~~v~k~A~~~g~~~v~~RWlgG~LTN~~~-~~~~~Pdliiv~dp~-~ 125 (204)
T PRK04020 49 RKTDERIRIAAKFLSRYEPEKILVVSSRQY-GQKPVQKFAEVVGAKAITGRFIPGTLTNPSL-KGYIEPDVVVVTDPR-G 125 (204)
T ss_pred HHHHHHHHHHHHHHHHhcCCeEEEEeCCHH-HHHHHHHHHHHhCCeeecCccCCCcCcCcch-hccCCCCEEEEECCc-c
Confidence 3444445555544433 3457788887653 4555666665544211 122221 11111 112233555543322 2
Q ss_pred CcHHHHHHHHcCCceEEc-CCCCcccce
Q 007224 490 CGLIQLHAMRYGTVPIVA-STGGLVDTV 516 (612)
Q Consensus 490 ~gl~~lEAma~G~PvI~s-~~gg~~e~v 516 (612)
-..++.||...|.|+|+- |+..-++.|
T Consensus 126 ~~~AI~EA~kl~IP~IaivDTn~dp~~V 153 (204)
T PRK04020 126 DAQAVKEAIEVGIPVVALCDTDNLTSNV 153 (204)
T ss_pred cHHHHHHHHHhCCCEEEEEeCCCCcccC
Confidence 368899999999999997 455555554
No 347
>PRK06182 short chain dehydrogenase; Validated
Probab=26.74 E-value=88 Score=31.27 Aligned_cols=25 Identities=36% Similarity=0.481 Sum_probs=19.7
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++||+|.++...
T Consensus 12 sggiG---~~la~~l~~~G~~V~~~~r~ 36 (273)
T PRK06182 12 SSGIG---KATARRLAAQGYTVYGAARR 36 (273)
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 45788899999999887654
No 348
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=26.41 E-value=81 Score=31.27 Aligned_cols=33 Identities=24% Similarity=0.461 Sum_probs=24.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|++++++. .||+| ..+++.|+++|++|.++...
T Consensus 1 m~vlItGa-------s~gIG---~aia~~l~~~G~~V~~~~r~ 33 (259)
T PRK08340 1 MNVLVTAS-------SRGIG---FNVARELLKKGARVVISSRN 33 (259)
T ss_pred CeEEEEcC-------CcHHH---HHHHHHHHHcCCEEEEEeCC
Confidence 67777664 36666 56888899999998877543
No 349
>PRK09004 FMN-binding protein MioC; Provisional
Probab=26.39 E-value=95 Score=28.28 Aligned_cols=27 Identities=26% Similarity=0.298 Sum_probs=23.9
Q ss_pred ccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 99 KTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 99 ~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
.+|-.+.+...|+..+.++|++|.++.
T Consensus 11 ~tGnae~~A~~l~~~~~~~g~~~~~~~ 37 (146)
T PRK09004 11 TLGGAEYVADHLAEKLEEAGFSTETLH 37 (146)
T ss_pred CchHHHHHHHHHHHHHHHcCCceEEec
Confidence 378899999999999999999999864
No 350
>PF09198 T4-Gluco-transf: Bacteriophage T4 beta-glucosyltransferase; InterPro: IPR015281 Members of this family are DNA-modifying enzymes encoded by bacteriophage T4 that transfer glucose from uridine diphosphoglucose to 5-hydroxymethyl cytosine bases of phage T4 DNA []. ; PDB: 1J39_A 1SXQ_B 1NZF_A 1M5R_B 1JEJ_A 1JIV_A 1NZD_A 1NVK_A 2BGU_A 1JIU_A ....
Probab=26.27 E-value=1.9e+02 Score=19.26 Aligned_cols=36 Identities=17% Similarity=0.127 Sum_probs=20.5
Q ss_pred ceEEEEecc--ccCccccccHHHHhhhhHHHHHhCCCeEE
Q 007224 85 LNILFVGTE--VAPWSKTGGLGDVLGGLPPALAANGHRVM 122 (612)
Q Consensus 85 MkIl~v~~~--~~P~~~~GG~~~~~~~La~~L~~~Gh~V~ 122 (612)
|||+++... .-.+ ++ --+.-...|.+.+.+.|.+|.
T Consensus 1 mkiai~n~gnni~~f-kt-~p~setiyl~~~~~~mgl~vd 38 (38)
T PF09198_consen 1 MKIAIINMGNNIQNF-KT-TPSSETIYLFKCISDMGLNVD 38 (38)
T ss_dssp -EEEEEESSS--SSS-SS-HHHHHHHHHHHHHHTTT-EEE
T ss_pred CeEEEEecCCceece-ee-cCccceEeHHHHHHHhCCCCC
Confidence 788888743 1111 11 123345678899999998884
No 351
>PRK05884 short chain dehydrogenase; Provisional
Probab=26.13 E-value=91 Score=30.27 Aligned_cols=33 Identities=24% Similarity=0.553 Sum_probs=24.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||+++++. .||+| ..+++.|+++|++|.++..+
T Consensus 1 m~vlItGa-------s~giG---~~ia~~l~~~g~~v~~~~r~ 33 (223)
T PRK05884 1 VEVLVTGG-------DTDLG---RTIAEGFRNDGHKVTLVGAR 33 (223)
T ss_pred CeEEEEeC-------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57666553 36666 56888899999999988654
No 352
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=26.08 E-value=92 Score=30.20 Aligned_cols=35 Identities=29% Similarity=0.420 Sum_probs=24.0
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+++|++++. +||+| ..+++.|.++|++|.+++.+
T Consensus 4 ~~~~vlItG~-------sg~iG---~~l~~~l~~~G~~v~~~~~~ 38 (248)
T PRK05557 4 EGKVALVTGA-------SRGIG---RAIAERLAAQGANVVINYAS 38 (248)
T ss_pred CCCEEEEECC-------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3455555543 46666 66778899999999887754
No 353
>PRK05647 purN phosphoribosylglycinamide formyltransferase; Reviewed
Probab=26.05 E-value=1.8e+02 Score=28.18 Aligned_cols=34 Identities=21% Similarity=0.313 Sum_probs=23.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCC--CeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G--h~V~vit~~ 127 (612)
|||+++.+ |-+.....+..++.+.+ ++|.++.+.
T Consensus 2 ~ki~vl~s---------g~gs~~~~ll~~~~~~~~~~~I~~vvs~ 37 (200)
T PRK05647 2 KRIVVLAS---------GNGSNLQAIIDACAAGQLPAEIVAVISD 37 (200)
T ss_pred ceEEEEEc---------CCChhHHHHHHHHHcCCCCcEEEEEEec
Confidence 89999974 33556778888887765 566655443
No 354
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=26.04 E-value=90 Score=30.40 Aligned_cols=34 Identities=29% Similarity=0.487 Sum_probs=23.7
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+++|++++. .||+| ..+++.|.++|++|.+++.+
T Consensus 6 ~~~ilItGa-------sg~iG---~~l~~~l~~~g~~V~~~~r~ 39 (251)
T PRK12826 6 GRVALVTGA-------ARGIG---RAIAVRLAADGAEVIVVDIC 39 (251)
T ss_pred CCEEEEcCC-------CCcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 456665443 35666 56788899999999887654
No 355
>TIGR00036 dapB dihydrodipicolinate reductase.
Probab=25.97 E-value=1.8e+02 Score=29.35 Aligned_cols=36 Identities=19% Similarity=0.076 Sum_probs=29.4
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG 511 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg 511 (612)
..+|+++-.|..+..--.+..|+.+|+|+|+..+|-
T Consensus 67 ~~~DvVIdfT~p~~~~~~~~~al~~g~~vVigttg~ 102 (266)
T TIGR00036 67 TDPDVLIDFTTPEGVLNHLKFALEHGVRLVVGTTGF 102 (266)
T ss_pred CCCCEEEECCChHHHHHHHHHHHHCCCCEEEECCCC
Confidence 468999988876666677899999999999877654
No 356
>PLN02208 glycosyltransferase family protein
Probab=25.96 E-value=96 Score=34.04 Aligned_cols=39 Identities=26% Similarity=0.362 Sum_probs=28.8
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+++|+++. +.-.| --.=+.+||+.|+.+|++|+++++.
T Consensus 3 ~~~hvv~~P-----~paqG-Hi~P~l~LAk~La~~G~~VT~vtt~ 41 (442)
T PLN02208 3 PKFHAFMFP-----WFAFG-HMIPFLHLANKLAEKGHRVTFLLPK 41 (442)
T ss_pred CCCEEEEec-----Ccccc-HHHHHHHHHHHHHhCCCEEEEEecc
Confidence 356787774 32244 4446778999999999999999965
No 357
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=25.91 E-value=58 Score=31.80 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=31.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (612)
|.+++++. +| ..|-.+....|+++|.+++|+|..++..|
T Consensus 1 mpLiIlTG--yP---gsGKTtfakeLak~L~~~i~~vi~l~kdy 39 (261)
T COG4088 1 MPLIILTG--YP---GSGKTTFAKELAKELRQEIWRVIHLEKDY 39 (261)
T ss_pred CceEEEec--CC---CCCchHHHHHHHHHHHHhhhhccccchhh
Confidence 45566664 36 67899999999999999999999988653
No 358
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=25.90 E-value=91 Score=31.30 Aligned_cols=34 Identities=29% Similarity=0.461 Sum_probs=25.5
Q ss_pred ceEEEEeccccCccccc--cHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTG--GLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~G--G~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|+|.+.+ .| |-.+.+..||.+|+++|++|.+|=.
T Consensus 1 ~~i~v~g--------KGGvGKTT~a~nLA~~la~~G~rvlliD~ 36 (267)
T cd02032 1 MVLAVYG--------KGGIGKSTTSSNLSVALAKRGKKVLQIGC 36 (267)
T ss_pred CEEEEec--------CCCCCHHHHHHHHHHHHHHCCCcEEEEec
Confidence 6666663 34 4455678899999999999999844
No 359
>PF12683 DUF3798: Protein of unknown function (DUF3798); InterPro: IPR024258 This entry represents functionally uncharacterised proteins that are found in bacteria. They are typically between 247 and 417 amino acids in length. Most of the proteins in this entry have an N-terminal lipoprotein attachment site. These proteins have distant similarity to periplasmic ligand binding families suggesting that this family has a similar role.; PDB: 3QI7_A.
Probab=25.85 E-value=4e+02 Score=27.08 Aligned_cols=111 Identities=15% Similarity=0.184 Sum_probs=63.8
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccC
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~ 467 (612)
+++.+++|-. ....+.|.-.+. ...+..+.-+..|.. |+++.+|+-.+.+.....++++.++.|+ +..+...+
T Consensus 23 e~l~~~Yg~~---~I~h~tyPdnf~--~e~EttIskI~~lAdDp~mKaIVv~q~vpGt~~af~kIkekRpD-Il~ia~~~ 96 (275)
T PF12683_consen 23 EELIKKYGDV---MIKHVTYPDNFM--SEQETTISKIVSLADDPDMKAIVVSQAVPGTAEAFRKIKEKRPD-ILLIAGEP 96 (275)
T ss_dssp HHHHHHHHHH---EEEEEE--TTGG--GCHHHHHHHHHGGGG-TTEEEEEEE-SS---HHHHHHHHHH-TT-SEEEESS-
T ss_pred HHHHHHhCcc---eEEEEeCCCccc--chHHHHHHHHHHhccCCCccEEEEeCCCcchHHHHHHHHhcCCC-eEEEcCCC
Confidence 4555666631 112334444443 347888887777765 8999999999888888899999988887 55666666
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHH-HHHcCCceEE
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLH-AMRYGTVPIV 506 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lE-Ama~G~PvI~ 506 (612)
.+....+-..+|+.+.+.. ...|..+.+ |-.+|.-..+
T Consensus 97 ~EDp~~i~~~aDi~~~~D~-~~~G~~i~~~Ak~mGAktFV 135 (275)
T PF12683_consen 97 HEDPEVISSAADIVVNPDE-ISRGYTIVWAAKKMGAKTFV 135 (275)
T ss_dssp -S-HHHHHHHSSEEEE--H-HHHHHHHHHHHHHTT-S-EE
T ss_pred cCCHHHHhhccCeEeccch-hhccHHHHHHHHHcCCceEE
Confidence 6666678889999998543 344544333 3345554433
No 360
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=25.73 E-value=80 Score=32.10 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=23.7
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCC----CeEEEEe
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG----HRVMTIA 125 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G----h~V~vit 125 (612)
|+.|||.||+ .|.+-..++..|.++| ++|.++.
T Consensus 1 ~~~mkI~~IG-----------~G~mG~aia~~l~~~g~~~~~~v~v~~ 37 (279)
T PRK07679 1 MSIQNISFLG-----------AGSIAEAIIGGLLHANVVKGEQITVSN 37 (279)
T ss_pred CCCCEEEEEC-----------ccHHHHHHHHHHHHCCCCCcceEEEEC
Confidence 5679999995 2334466888899988 6776653
No 361
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=25.56 E-value=4.1e+02 Score=24.83 Aligned_cols=66 Identities=11% Similarity=0.093 Sum_probs=38.4
Q ss_pred HHHHHHHHhccc--CCcEEEEEeCCchhH-HHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCCCC
Q 007224 419 DILAAAIPHFIK--ENVQIIVLGTGKKPM-EKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF 487 (612)
Q Consensus 419 d~ll~a~~~l~~--~~~~lvivG~g~~~~-~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~ 487 (612)
...+++++++.. .+-+++|+|.|. + ...+.....+.+.++.... ...+.+.+.++.||+++...-.
T Consensus 29 ~a~v~l~~~~~~~l~gk~vlViG~G~--~~G~~~a~~L~~~g~~V~v~~-r~~~~l~~~l~~aDiVIsat~~ 97 (168)
T cd01080 29 AGILELLKRYGIDLAGKKVVVVGRSN--IVGKPLAALLLNRNATVTVCH-SKTKNLKEHTKQADIVIVAVGK 97 (168)
T ss_pred HHHHHHHHHcCCCCCCCEEEEECCcH--HHHHHHHHHHhhCCCEEEEEE-CCchhHHHHHhhCCEEEEcCCC
Confidence 344555555532 578899999986 3 2322232223332343333 3344556799999999987654
No 362
>PRK09620 hypothetical protein; Provisional
Probab=25.52 E-value=1.1e+02 Score=30.36 Aligned_cols=20 Identities=15% Similarity=0.189 Sum_probs=17.2
Q ss_pred hhhHHHHHhCCCeEEEEeec
Q 007224 108 GGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 108 ~~La~~L~~~Gh~V~vit~~ 127 (612)
..|+++|.++|++|+++...
T Consensus 33 s~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 33 RIIAEELISKGAHVIYLHGY 52 (229)
T ss_pred HHHHHHHHHCCCeEEEEeCC
Confidence 66899999999999999743
No 363
>PRK13671 hypothetical protein; Provisional
Probab=25.52 E-value=2.4e+02 Score=29.12 Aligned_cols=136 Identities=14% Similarity=0.200 Sum_probs=67.3
Q ss_pred EEEEEcCccc-ccCHHHHHHHHHhcccCC-cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 405 VIGFIGRLEE-QKGSDILAAAIPHFIKEN-VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~il~iGrl~~-~Kg~d~ll~a~~~l~~~~-~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
+++.|..++| +.|+-.+++.+.+....| +-++..|.... .+. -...-.+.+-.+ ..-.++|++|
T Consensus 2 ~~GIIaeFNP~H~GHl~~~~~a~~~~~~d~vi~vpSg~~~q------------rg~-pa~~~~~~R~~m-a~~~G~DLVi 67 (298)
T PRK13671 2 AIGIIAEYNPFHNGHIYQINYIKNKFPNEKIIVILSGKYTQ------------RGE-IAVASFEKRKKI-ALKYGVDKVI 67 (298)
T ss_pred ceeEEeeeCCccHHHHHHHHHHHHhcCCCEEEEEECcCCCC------------CCC-CCCCCHHHHHHH-HHHcCCCEEE
Confidence 3566777776 789988888888865544 33333343220 000 000011111111 2445788888
Q ss_pred e-CCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHH
Q 007224 483 I-PSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE 561 (612)
Q Consensus 483 ~-pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~ 561 (612)
- |.. |...-.|..|.|-.-|....| +|. +.|| .+.+|.+.+.+....+.+. ++.+++
T Consensus 68 ELP~~---~a~~sAe~FA~gaV~lL~~lg--vd~-------l~FG--------sE~~d~~~l~~~a~~l~~~--~~~~~~ 125 (298)
T PRK13671 68 KLPFE---YATQAAHIFAKGAIKKLNKEK--IDK-------LIFG--------SESNDIELMYKIANTIKEN--EEEYNQ 125 (298)
T ss_pred eccHH---HHhhchHHHHHHHHHHHHHcC--CCE-------EEEC--------CCCCCHHHHHHHHHHHHhC--cHHHHH
Confidence 3 322 334444555555544444444 222 3332 1456777776666555554 455555
Q ss_pred HHHHHHHhcCCcHHH
Q 007224 562 MMKNGMAQDLSWKGP 576 (612)
Q Consensus 562 ~~~~~~~~~~sw~~~ 576 (612)
..++.+.+..|+-..
T Consensus 126 ~l~~~l~~G~Sy~~a 140 (298)
T PRK13671 126 LLKKNLKQGYSFPKA 140 (298)
T ss_pred HHHHHHHCCCCHHHH
Confidence 555555555555433
No 364
>PRK00211 sulfur relay protein TusC; Validated
Probab=25.47 E-value=1.2e+02 Score=26.75 Aligned_cols=40 Identities=20% Similarity=-0.007 Sum_probs=28.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+||... .|+ .+-.+.-..+++-++++.+++|.++-..
T Consensus 2 ~ki~~i~~~-~Py--g~~~~~eaLd~ala~~a~~~~v~vff~~ 41 (119)
T PRK00211 2 KRIAFVFRQ-APH--GTASGREGLDALLATSAFTEDIGVFFID 41 (119)
T ss_pred ceEEEEecC-CCC--CCHHHHHHHHHHHHHhcccCCeeEEEEh
Confidence 569999886 675 2224444555588888889999888765
No 365
>PLN02306 hydroxypyruvate reductase
Probab=25.36 E-value=1.6e+02 Score=31.64 Aligned_cols=45 Identities=22% Similarity=0.202 Sum_probs=34.5
Q ss_pred HHHHHHHhcCEEEe--CCCCCCCc---HHHHHHHHcCCceEEcCCCCccc
Q 007224 470 LAHMIIAGADFILI--PSRFEPCG---LIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 470 ~~~~~l~~adi~l~--pS~~E~~g---l~~lEAma~G~PvI~s~~gg~~e 514 (612)
.+.++++.||++++ |...|+.+ -..++.|--|.-+|-+.-|++.|
T Consensus 229 ~L~ell~~sDiV~lh~Plt~~T~~lin~~~l~~MK~ga~lIN~aRG~lVD 278 (386)
T PLN02306 229 SMEEVLREADVISLHPVLDKTTYHLINKERLALMKKEAVLVNASRGPVID 278 (386)
T ss_pred CHHHHHhhCCEEEEeCCCChhhhhhcCHHHHHhCCCCeEEEECCCccccC
Confidence 35679999999886 33446544 46899999999899888888765
No 366
>COG4007 Predicted dehydrogenase related to H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase [General function prediction only]
Probab=25.36 E-value=45 Score=33.45 Aligned_cols=33 Identities=30% Similarity=0.579 Sum_probs=25.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeecCCccccc-CCc
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDA-WDT 137 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~-~~~ 137 (612)
.||.. +|-++++.||||.+.-|..+-.++. |+.
T Consensus 31 yGGa~-----mAiefAeAGHDVVLaePn~d~~dd~~w~~ 64 (340)
T COG4007 31 YGGAR-----MAIEFAEAGHDVVLAEPNRDIMDDEHWKR 64 (340)
T ss_pred CCchH-----HHHHHHHcCCcEEeecCCccccCHHHHHH
Confidence 58877 8889999999999999886655443 653
No 367
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=25.31 E-value=83 Score=34.43 Aligned_cols=35 Identities=31% Similarity=0.380 Sum_probs=25.6
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.+.|||++++ |.|-.=..|++.|.++||+|.++..
T Consensus 118 ~~~mkILVTG----------atGFIGs~Lv~~Ll~~G~~V~~ldr 152 (436)
T PLN02166 118 RKRLRIVVTG----------GAGFVGSHLVDKLIGRGDEVIVIDN 152 (436)
T ss_pred cCCCEEEEEC----------CccHHHHHHHHHHHHCCCEEEEEeC
Confidence 4569987764 3443446688999999999998764
No 368
>PRK07102 short chain dehydrogenase; Provisional
Probab=25.28 E-value=90 Score=30.49 Aligned_cols=25 Identities=24% Similarity=0.252 Sum_probs=19.5
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 10 s~giG---~~~a~~l~~~G~~Vi~~~r~ 34 (243)
T PRK07102 10 TSDIA---RACARRYAAAGARLYLAARD 34 (243)
T ss_pred CcHHH---HHHHHHHHhcCCEEEEEeCC
Confidence 46666 66888899999999888654
No 369
>PLN00198 anthocyanidin reductase; Provisional
Probab=25.26 E-value=92 Score=32.37 Aligned_cols=36 Identities=25% Similarity=0.118 Sum_probs=24.4
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+.+|+|++.+. .|.+| ..|++.|.++||+|.+++..
T Consensus 7 ~~~~~vlItG~-------~GfIG---~~l~~~L~~~g~~V~~~~r~ 42 (338)
T PLN00198 7 TGKKTACVIGG-------TGFLA---SLLIKLLLQKGYAVNTTVRD 42 (338)
T ss_pred CCCCeEEEECC-------chHHH---HHHHHHHHHCCCEEEEEECC
Confidence 44566655543 35555 56888899999999877643
No 370
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=25.26 E-value=1.9e+02 Score=25.92 Aligned_cols=68 Identities=18% Similarity=0.088 Sum_probs=40.0
Q ss_pred HHHHhcCEEEeCCCCCC-----CcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 473 MIIAGADFILIPSRFEP-----CGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~-----~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
.++..||++|+--- |- -.+-.--|.+.|+|.|.-....+..-+++-...-.. -..++++.++.|
T Consensus 68 ~li~~aDvVVvrFG-ekYKQWNaAfDAg~a~AlgKplI~lh~~~~~HpLKEvda~A~a----------~~et~~Qvv~iL 136 (141)
T PF11071_consen 68 TLIEKADVVVVRFG-EKYKQWNAAFDAGYAAALGKPLITLHPEELHHPLKEVDAAALA----------VAETPEQVVEIL 136 (141)
T ss_pred HHHhhCCEEEEEec-hHHHHHHHHhhHHHHHHcCCCeEEecchhccccHHHHhHhhHh----------hhCCHHHHHHHH
Confidence 58999999996310 21 122234467899999998866655555442222211 345666666666
Q ss_pred HHHH
Q 007224 548 RRAL 551 (612)
Q Consensus 548 ~~ll 551 (612)
..++
T Consensus 137 ~Yv~ 140 (141)
T PF11071_consen 137 RYVL 140 (141)
T ss_pred HHHh
Confidence 6554
No 371
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=25.23 E-value=55 Score=33.32 Aligned_cols=30 Identities=33% Similarity=0.469 Sum_probs=25.5
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
+||.|-.=..|...|.+.||+|++++.+..
T Consensus 4 TGgTGlIG~~L~~~L~~~gh~v~iltR~~~ 33 (297)
T COG1090 4 TGGTGLIGRALTARLRKGGHQVTILTRRPP 33 (297)
T ss_pred eccccchhHHHHHHHHhCCCeEEEEEcCCc
Confidence 678887777899999999999999997743
No 372
>PRK06849 hypothetical protein; Provisional
Probab=25.19 E-value=89 Score=33.41 Aligned_cols=35 Identities=17% Similarity=0.225 Sum_probs=26.9
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+||||+++.. ......++++|.++||+|.++...
T Consensus 3 ~~~~VLI~G~~----------~~~~l~iar~l~~~G~~Vi~~d~~ 37 (389)
T PRK06849 3 TKKTVLITGAR----------APAALELARLFHNAGHTVILADSL 37 (389)
T ss_pred CCCEEEEeCCC----------cHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46899888654 114567999999999999999664
No 373
>COG1922 WecG Teichoic acid biosynthesis proteins [Cell envelope biogenesis, outer membrane]
Probab=25.16 E-value=3.3e+02 Score=27.42 Aligned_cols=99 Identities=22% Similarity=0.343 Sum_probs=62.2
Q ss_pred ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC-CceEEEe--ccChHHHHHHH-----HhcCEEEeCC-
Q 007224 415 QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVA--KFNIPLAHMII-----AGADFILIPS- 485 (612)
Q Consensus 415 ~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~-~~i~~~~--~~~~~~~~~~l-----~~adi~l~pS- 485 (612)
--|.|++...++...+++.++.++|..+...++..+.+.+++| .++.+.- .|..++...++ .++|++++--
T Consensus 91 v~G~Dl~~~Ll~~a~~~~~~vfllGgkp~V~~~a~~~l~~~~p~l~ivg~h~GYf~~~e~~~i~~~I~~s~pdil~VgmG 170 (253)
T COG1922 91 VAGTDLVEALLKRAAEEGKRVFLLGGKPGVAEQAAAKLRAKYPGLKIVGSHDGYFDPEEEEAIVERIAASGPDILLVGMG 170 (253)
T ss_pred CChHHHHHHHHHHhCccCceEEEecCCHHHHHHHHHHHHHHCCCceEEEecCCCCChhhHHHHHHHHHhcCCCEEEEeCC
Confidence 3488998888888877789999999888777888888888998 3454443 34433333333 3678888632
Q ss_pred --CCCCCcHHHHHHH-HcCCceEEcCCCCccccee
Q 007224 486 --RFEPCGLIQLHAM-RYGTVPIVASTGGLVDTVE 517 (612)
Q Consensus 486 --~~E~~gl~~lEAm-a~G~PvI~s~~gg~~e~v~ 517 (612)
+.|-| +..-. .+.+ .|.--+||.-|+..
T Consensus 171 ~P~QE~w---i~~~~~~~~~-~v~igVGg~fDv~s 201 (253)
T COG1922 171 VPRQEIW---IARNRQQLPV-AVAIGVGGSFDVFS 201 (253)
T ss_pred CchhHHH---HHHhHHhcCC-ceEEeccceEEEec
Confidence 11222 11111 2333 44555677777764
No 374
>COG0716 FldA Flavodoxins [Energy production and conversion]
Probab=25.15 E-value=94 Score=28.33 Aligned_cols=36 Identities=28% Similarity=0.302 Sum_probs=29.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
|||++|-.+ .+|..+.++..++..|.+.|++|.+..
T Consensus 2 ~ki~Ivy~S-----~tGnTe~vA~~i~~~l~~~~~~~~~~~ 37 (151)
T COG0716 2 MKILIVYGS-----RTGNTEKVAEIIAEELGADGFEVDIDI 37 (151)
T ss_pred CeEEEEEEc-----CCCcHHHHHHHHHHHhccCCceEEEee
Confidence 788888654 379999999999999999999995544
No 375
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=25.11 E-value=1.8e+02 Score=32.13 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=28.0
Q ss_pred CCCceEEEEeccccCccccccHHH-HhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGD-VLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~-~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..++||++.. +||++. ....|.+.|.+.|++|.|+...
T Consensus 68 l~~k~IllgV--------tGsIAayka~~lvr~L~k~G~~V~VvmT~ 106 (475)
T PRK13982 68 LASKRVTLII--------GGGIAAYKALDLIRRLKERGAHVRCVLTK 106 (475)
T ss_pred cCCCEEEEEE--------ccHHHHHHHHHHHHHHHhCcCEEEEEECc
Confidence 3467888776 355543 4567999999999999888764
No 376
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=25.08 E-value=9.2e+02 Score=26.32 Aligned_cols=83 Identities=7% Similarity=0.023 Sum_probs=50.2
Q ss_pred CcHHHHHHHHcCCceEEcCCCCcccceecC----ceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHH
Q 007224 490 CGLIQLHAMRYGTVPIVASTGGLVDTVEEG----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN 565 (612)
Q Consensus 490 ~gl~~lEAma~G~PvI~s~~gg~~e~v~~g----~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~ 565 (612)
.|.++--+...|+|+....+|--.+-+..- ....+ ..-+|+.+|++.+++.++. +..+++.++
T Consensus 255 ~G~~lsi~~~~~~PI~fi~~Ge~i~dl~~f~p~~~~~~i----------Lg~gD~~~l~e~~~~~~~~---~~~~~~~~~ 321 (428)
T TIGR00959 255 GGAALSVRSVTGKPIKFIGVGEKIDDLEPFHPERMASRI----------LGMGDILSLVEKAQEVVDE---EEAKKLAEK 321 (428)
T ss_pred ccHHHHHHHHHCcCEEEEeCCCChhhCccCCHHHHHHHH----------hCCCChHHHHHHHHHhhCH---HHHHHHHHH
Confidence 566666667799999988876433222211 01111 1346666777777766643 333445555
Q ss_pred HHHhcCCcHHHHHHHHHHHH
Q 007224 566 GMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 566 ~~~~~~sw~~~a~~~~~~y~ 585 (612)
-....|+.+.+.+++..+-+
T Consensus 322 ~~~~~f~l~d~~~q~~~~~k 341 (428)
T TIGR00959 322 MKKGQFDLEDFLEQLRQIKK 341 (428)
T ss_pred HHhCCCCHHHHHHHHHHHHh
Confidence 45678999999988887754
No 377
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=25.02 E-value=94 Score=30.79 Aligned_cols=35 Identities=34% Similarity=0.539 Sum_probs=25.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
|+|+.+.. +|.+| ..+++.|.++||+|.+++.+..
T Consensus 1 ~~ilV~Ga-------tG~~G---~~~~~~L~~~~~~v~~~~r~~~ 35 (275)
T COG0702 1 MKILVTGA-------TGFVG---GAVVRELLARGHEVRAAVRNPE 35 (275)
T ss_pred CeEEEEec-------ccchH---HHHHHHHHhCCCEEEEEEeCHH
Confidence 56666654 34444 6678889999999999998743
No 378
>TIGR03646 YtoQ_fam YtoQ family protein. Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=25.00 E-value=1.9e+02 Score=26.00 Aligned_cols=45 Identities=18% Similarity=0.185 Sum_probs=28.2
Q ss_pred HHHHHhcCEEEeCCCCC-----CCcHHHHHHHHcCCceEEcCCCCccccee
Q 007224 472 HMIIAGADFILIPSRFE-----PCGLIQLHAMRYGTVPIVASTGGLVDTVE 517 (612)
Q Consensus 472 ~~~l~~adi~l~pS~~E-----~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 517 (612)
..++..||++|+--- | +-.+-.--|.+.|+|.|.-....+..-++
T Consensus 70 ~~li~~aDvvVvrFG-ekYKQWNaAfDAg~aaAlgKplI~lh~~~~~HpLK 119 (144)
T TIGR03646 70 RKLIEKADVVIALFG-EKYKQWNAAFDAGYAAALGKPLIILRPEELIHPLK 119 (144)
T ss_pred HHHHhhCCEEEEEec-hHHHHHHHHhhHHHHHHcCCCeEEecchhccccHH
Confidence 358899999996310 1 11222344678999999987655444443
No 379
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=24.99 E-value=60 Score=34.98 Aligned_cols=30 Identities=23% Similarity=0.441 Sum_probs=23.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCC-eEEEEe
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH-RVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh-~V~vit 125 (612)
|||++|+.. .+|+. +|.+|+++|| +|+|+=
T Consensus 1 ~~V~IiGgG------iaGla-----~A~~L~~~g~~~v~v~E 31 (414)
T TIGR03219 1 LRVAIIGGG------IAGVA-----LALNLCKHSHLNVQLFE 31 (414)
T ss_pred CeEEEECCC------HHHHH-----HHHHHHhcCCCCEEEEe
Confidence 789998754 45666 8888999996 999974
No 380
>PRK11104 hemG protoporphyrinogen oxidase; Provisional
Probab=24.94 E-value=86 Score=29.58 Aligned_cols=36 Identities=11% Similarity=0.213 Sum_probs=28.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++|-.+ .+|-...+...++..|.+ |++|.++-.
T Consensus 1 MkilIvY~S-----~~G~T~~iA~~Ia~~l~~-g~~v~~~~~ 36 (177)
T PRK11104 1 MKTLILYSS-----RDGQTRKIASYIASELKE-GIQCDVVNL 36 (177)
T ss_pred CcEEEEEEC-----CCChHHHHHHHHHHHhCC-CCeEEEEEh
Confidence 788887543 578888889999999988 999988743
No 381
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=24.88 E-value=99 Score=30.17 Aligned_cols=34 Identities=29% Similarity=0.575 Sum_probs=24.6
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+++|++++. .||+| ..+++.|.++|++|.++...
T Consensus 5 ~~~vlItGa-------sg~iG---~~l~~~l~~~G~~V~~~~r~ 38 (251)
T PRK07231 5 GKVAIVTGA-------SSGIG---EGIARRFAAEGARVVVTDRN 38 (251)
T ss_pred CcEEEEECC-------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 456666654 46666 56888899999998777654
No 382
>PF10649 DUF2478: Protein of unknown function (DUF2478); InterPro: IPR018912 This is a family of hypothetical bacterial proteins encoded in the vicinity of molybdenum ABC transporter gene-products MobA, MobB and MobC. However the function could not be confirmed.
Probab=24.86 E-value=1.3e+02 Score=28.05 Aligned_cols=38 Identities=24% Similarity=0.271 Sum_probs=27.6
Q ss_pred HHHHhcCEEEeCCC----CCCCcH--HHHHHHHcCCceEEcCCC
Q 007224 473 MIIAGADFILIPSR----FEPCGL--IQLHAMRYGTVPIVASTG 510 (612)
Q Consensus 473 ~~l~~adi~l~pS~----~E~~gl--~~lEAma~G~PvI~s~~g 510 (612)
.+-..+|++|+.-. .|+-|+ .+.+|++.|+||++.-..
T Consensus 89 al~~~~DLlivNkFGk~Ea~G~Glr~~i~~A~~~giPVLt~V~~ 132 (159)
T PF10649_consen 89 ALAEGADLLIVNKFGKQEAEGRGLRDEIAAALAAGIPVLTAVPP 132 (159)
T ss_pred HHhcCCCEEEEcccHHhhhcCCCHHHHHHHHHHCCCCEEEEECH
Confidence 35556899888643 245555 699999999999998543
No 383
>PRK08265 short chain dehydrogenase; Provisional
Probab=24.85 E-value=1e+02 Score=30.59 Aligned_cols=25 Identities=28% Similarity=0.372 Sum_probs=19.5
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 15 s~gIG---~~ia~~l~~~G~~V~~~~r~ 39 (261)
T PRK08265 15 ATLIG---AAVARALVAAGARVAIVDID 39 (261)
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46666 66888899999999887644
No 384
>TIGR00670 asp_carb_tr aspartate carbamoyltransferase. Ornithine carbamoyltransferases are in the same superfamily and form an outgroup.
Probab=24.82 E-value=6.8e+02 Score=25.86 Aligned_cols=85 Identities=20% Similarity=0.239 Sum_probs=52.8
Q ss_pred HHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHH
Q 007224 391 LQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 391 l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~ 470 (612)
+++.+|-- +...|.|+|-+.+..=..-++.++.++ ++++.++++..-.....+.+...+.+..+... +.
T Consensus 141 i~e~~g~l---~g~~va~vGD~~~~~v~~Sl~~~~a~~---g~~v~~~~P~~~~~~~~~~~~~~~~G~~v~~~-----~d 209 (301)
T TIGR00670 141 IYEEFGRL---DGLKIALVGDLKYGRTVHSLAEALTRF---GVEVYLISPEELRMPKEILEELKAKGIKVRET-----ES 209 (301)
T ss_pred HHHHhCCC---CCCEEEEEccCCCCcHHHHHHHHHHHc---CCEEEEECCccccCCHHHHHHHHHcCCEEEEE-----CC
Confidence 45566621 336899999765566678888888888 68999999754212223333333444333221 22
Q ss_pred HHHHHHhcCEEEeCCC
Q 007224 471 AHMIIAGADFILIPSR 486 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~ 486 (612)
..+.+++||++...+.
T Consensus 210 ~~~a~~~aDvvyt~~~ 225 (301)
T TIGR00670 210 LEEVIDEADVLYVTRI 225 (301)
T ss_pred HHHHhCCCCEEEECCc
Confidence 3457999999888764
No 385
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=24.80 E-value=87 Score=32.57 Aligned_cols=32 Identities=22% Similarity=0.365 Sum_probs=23.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||.+|+. |..| ..++..|++.||+|+++...
T Consensus 1 MkI~IiGa--------Ga~G---~ala~~L~~~g~~V~l~~r~ 32 (326)
T PRK14620 1 MKISILGA--------GSFG---TAIAIALSSKKISVNLWGRN 32 (326)
T ss_pred CEEEEECc--------CHHH---HHHHHHHHHCCCeEEEEecC
Confidence 78888863 4444 45777899999999988654
No 386
>PRK13243 glyoxylate reductase; Reviewed
Probab=24.71 E-value=2.6e+02 Score=29.38 Aligned_cols=44 Identities=18% Similarity=0.280 Sum_probs=32.6
Q ss_pred HHHHHHhcCEEEeCC--CCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILIPS--RFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~pS--~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++.- ..|. ++-..+++|.-|.-+|-+..|++.+
T Consensus 198 l~ell~~aDiV~l~lP~t~~T~~~i~~~~~~~mk~ga~lIN~aRg~~vd 246 (333)
T PRK13243 198 LEELLRESDFVSLHVPLTKETYHMINEERLKLMKPTAILVNTARGKVVD 246 (333)
T ss_pred HHHHHhhCCEEEEeCCCChHHhhccCHHHHhcCCCCeEEEECcCchhcC
Confidence 456899999988743 2233 4456889999999888888888664
No 387
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=24.48 E-value=1e+02 Score=30.96 Aligned_cols=33 Identities=30% Similarity=0.501 Sum_probs=25.0
Q ss_pred ceEEEEeccccCccccccHH--HHhhhhHHHHHhCCCeEEEEe
Q 007224 85 LNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit 125 (612)
|+|++. . .||+| +.+..||.+|+++|++|.+|=
T Consensus 1 ~~i~~~-g-------KGGVGKTT~~~nLA~~La~~g~rVLliD 35 (268)
T TIGR01281 1 MILAVY-G-------KGGIGKSTTSSNLSVAFAKLGKRVLQIG 35 (268)
T ss_pred CEEEEE-c-------CCcCcHHHHHHHHHHHHHhCCCeEEEEe
Confidence 666666 2 46665 556789999999999999883
No 388
>PRK06953 short chain dehydrogenase; Provisional
Probab=24.34 E-value=98 Score=29.80 Aligned_cols=34 Identities=21% Similarity=0.402 Sum_probs=23.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 1 ~~~vlvtG~------sg~iG---~~la~~L~~~G~~v~~~~r~ 34 (222)
T PRK06953 1 MKTVLIVGA------SRGIG---REFVRQYRADGWRVIATARD 34 (222)
T ss_pred CceEEEEcC------CCchh---HHHHHHHHhCCCEEEEEECC
Confidence 555566532 45555 66788899999999887643
No 389
>PLN02253 xanthoxin dehydrogenase
Probab=24.33 E-value=1.2e+02 Score=30.52 Aligned_cols=25 Identities=16% Similarity=0.380 Sum_probs=19.5
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 27 s~gIG---~~la~~l~~~G~~v~~~~~~ 51 (280)
T PLN02253 27 ATGIG---ESIVRLFHKHGAKVCIVDLQ 51 (280)
T ss_pred CchHH---HHHHHHHHHcCCEEEEEeCC
Confidence 46666 56888899999999887643
No 390
>PRK12829 short chain dehydrogenase; Provisional
Probab=24.29 E-value=1e+02 Score=30.45 Aligned_cols=35 Identities=31% Similarity=0.489 Sum_probs=25.2
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
++++++++++. .||+| ..+++.|.++||+|.++..
T Consensus 9 ~~~~~vlItGa-------~g~iG---~~~a~~L~~~g~~V~~~~r 43 (264)
T PRK12829 9 LDGLRVLVTGG-------ASGIG---RAIAEAFAEAGARVHVCDV 43 (264)
T ss_pred cCCCEEEEeCC-------CCcHH---HHHHHHHHHCCCEEEEEeC
Confidence 34567776654 46666 5678889999999877764
No 391
>PRK10427 putative PTS system fructose-like transporter subunit EIIB; Provisional
Probab=24.18 E-value=1.3e+02 Score=26.22 Aligned_cols=39 Identities=10% Similarity=-0.060 Sum_probs=30.5
Q ss_pred ceEEEEeccccCccccccHHHHh--hhhHHHHHhCCCeEEEEeecC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVL--GGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~--~~La~~L~~~Gh~V~vit~~~ 128 (612)
|||+.|+.. | .|-...++ ..|.++-.++||++.|=+-..
T Consensus 3 mkivaVtac--p---~GiAht~lAAeaL~kAA~~~G~~i~VE~qg~ 43 (114)
T PRK10427 3 AYLVAVTAC--V---SGVAHTYMAAERLEKLCQLEKWGVKIETQGA 43 (114)
T ss_pred ceEEEEeeC--C---CcHHHHHHHHHHHHHHHHHCCCeEEEEecCC
Confidence 899999874 5 57677666 557788889999999888653
No 392
>PRK07538 hypothetical protein; Provisional
Probab=24.10 E-value=64 Score=34.75 Aligned_cols=31 Identities=29% Similarity=0.528 Sum_probs=23.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|+|++|+.. .+|+. +|.+|+++|++|+|+=.
T Consensus 1 ~dV~IVGaG------~aGl~-----~A~~L~~~G~~v~v~E~ 31 (413)
T PRK07538 1 MKVLIAGGG------IGGLT-----LALTLHQRGIEVVVFEA 31 (413)
T ss_pred CeEEEECCC------HHHHH-----HHHHHHhCCCcEEEEEc
Confidence 789998753 35555 67779999999999854
No 393
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=24.10 E-value=9.7e+02 Score=26.23 Aligned_cols=164 Identities=13% Similarity=0.163 Sum_probs=95.3
Q ss_pred EEcCcccccCHHHHHHHHHhcccCCcEEEEEeCC-----chhHHHHHHHHHHHC-CCceEEEecc-ChHHH----HHHHH
Q 007224 408 FIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTG-----KKPMEKQLEQLEILY-PEKARGVAKF-NIPLA----HMIIA 476 (612)
Q Consensus 408 ~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g-----~~~~~~~l~~l~~~~-~~~i~~~~~~-~~~~~----~~~l~ 476 (612)
|.+.-...+=+++.-+++++++...+.++|+-+. ++.+.++++++.... |+.+..++.- .+..+ ..+-.
T Consensus 158 ~f~~~~~~~Pv~Iak~al~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e 237 (451)
T COG0541 158 FFGSGTEKDPVEIAKAALEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNE 237 (451)
T ss_pred eecCCCCCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhh
Confidence 4444334455667888899888777788888773 245667777776654 5566655532 23222 22222
Q ss_pred hcCE--EEeCCCC-CCC-cHHHHHHHHcCCceEEcCCCCcccceec----CceEEEecccccccCCCCCCCHHHHHHHHH
Q 007224 477 GADF--ILIPSRF-EPC-GLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 477 ~adi--~l~pS~~-E~~-gl~~lEAma~G~PvI~s~~gg~~e~v~~----g~~G~l~~~~~~~~~~v~~~d~~~la~~l~ 548 (612)
+.++ +|++-.. .+- |-++-=....|+|+--..+|--.+-++. ....-+. -=+|+.+|.+.++
T Consensus 238 ~l~itGvIlTKlDGdaRGGaALS~~~~tg~PIkFiGtGEki~dLE~F~P~R~asRIL----------GMGDv~sLvEk~~ 307 (451)
T COG0541 238 ALGITGVILTKLDGDARGGAALSARAITGKPIKFIGTGEKIDDLEPFHPDRFASRIL----------GMGDVLSLIEKAE 307 (451)
T ss_pred hcCCceEEEEcccCCCcchHHHhhHHHHCCCeEEEecCCCcccCCCcChHHHHHHhc----------CcccHHHHHHHHH
Confidence 3232 3443322 233 3344444567999887776643332221 0001111 2367777777777
Q ss_pred HHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 007224 549 RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 549 ~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y 584 (612)
+.++ .+..+++.++-....|+.+.+.+++..+-
T Consensus 308 ~~~d---~e~a~~~~~kl~~g~FtL~Df~~Ql~~m~ 340 (451)
T COG0541 308 EVVD---EEEAEKLAEKLKKGKFTLEDFLEQLEQMK 340 (451)
T ss_pred Hhhh---HHHHHHHHHHHHhCCCCHHHHHHHHHHHH
Confidence 7776 35556666666778899999999988864
No 394
>PRK12939 short chain dehydrogenase; Provisional
Probab=23.97 E-value=1.1e+02 Score=29.78 Aligned_cols=36 Identities=31% Similarity=0.356 Sum_probs=24.6
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+++++|++++. .||+| ..+++.|+++|++|.++...
T Consensus 5 ~~~~~vlItGa-------~g~iG---~~la~~l~~~G~~v~~~~r~ 40 (250)
T PRK12939 5 LAGKRALVTGA-------ARGLG---AAFAEALAEAGATVAFNDGL 40 (250)
T ss_pred CCCCEEEEeCC-------CChHH---HHHHHHHHHcCCEEEEEeCC
Confidence 34556665543 46666 56778899999998887543
No 395
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms]
Probab=23.94 E-value=1e+03 Score=26.36 Aligned_cols=107 Identities=23% Similarity=0.269 Sum_probs=67.8
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc--CEEEeCCCC-CCCcHHHHHHHHc---CCceEEc
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA--DFILIPSRF-EPCGLIQLHAMRY---GTVPIVA 507 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a--di~l~pS~~-E~~gl~~lEAma~---G~PvI~s 507 (612)
+++++-+.. .....+++.-...+-.+. ..-+...+-..+... |+++.=.+. +.-|+.+++.+.. ++|||.-
T Consensus 6 ~iLvVDDd~-~ir~~l~~~L~~~G~~v~--~a~~~~~al~~i~~~~~~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~~ 82 (464)
T COG2204 6 RILVVDDDP-DIRELLEQALELAGYEVV--TAESAEEALEALSESPFDLVLLDIRMPGMDGLELLKEIKSRDPDLPVIVM 82 (464)
T ss_pred CEEEEeCCH-HHHHHHHHHHHHcCCeEE--EeCCHHHHHHHHhcCCCCEEEEecCCCCCchHHHHHHHHhhCCCCCEEEE
Confidence 455666543 355555555554442232 223445554555544 555554443 5678888887765 7888876
Q ss_pred C-CCC---cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 508 S-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 508 ~-~gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
. .|. .++-++.|..-|+. .|.|++.+...+.++++.
T Consensus 83 Tg~g~i~~AV~A~k~GA~Dfl~----------KP~~~~~L~~~v~ral~~ 122 (464)
T COG2204 83 TGHGDIDTAVEALRLGAFDFLE----------KPFDLDRLLAIVERALEL 122 (464)
T ss_pred eCCCCHHHHHHHHhcCcceeee----------CCCCHHHHHHHHHHHHHH
Confidence 5 444 34455567777766 999999999999999997
No 396
>PRK05583 ribosomal protein L7Ae family protein; Provisional
Probab=23.92 E-value=4.6e+02 Score=22.40 Aligned_cols=77 Identities=10% Similarity=0.116 Sum_probs=50.6
Q ss_pred CHHHHHHHHHhcccCCcEEEEEeCC-chhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHH
Q 007224 417 GSDILAAAIPHFIKENVQIIVLGTG-KKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQL 495 (612)
Q Consensus 417 g~d~ll~a~~~l~~~~~~lvivG~g-~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~l 495 (612)
|.+.+++++.. ..+.|+|+... .++..+.+++++..+. +..+..++.+++...+-...+.++.-..++|.-.++
T Consensus 21 G~~~v~~aik~---gk~~lVI~A~D~s~~~kkki~~~~~~~~--vp~~~~~t~~eLg~a~Gk~~~~~iai~d~g~a~~l~ 95 (104)
T PRK05583 21 GYNKCEEAIKK---KKVYLIIISNDISENSKNKFKNYCNKYN--IPYIEGYSKEELGNAIGRDEIKILGVKDKNMAKKLL 95 (104)
T ss_pred cHHHHHHHHHc---CCceEEEEeCCCCHhHHHHHHHHHHHcC--CCEEEecCHHHHHHHhCCCCeEEEEEeChHHHHHHH
Confidence 66777777765 36788777764 4667888888877766 333334677777767766555555555566766666
Q ss_pred HHH
Q 007224 496 HAM 498 (612)
Q Consensus 496 EAm 498 (612)
+.+
T Consensus 96 ~~~ 98 (104)
T PRK05583 96 KLW 98 (104)
T ss_pred HHH
Confidence 644
No 397
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=23.92 E-value=60 Score=30.05 Aligned_cols=35 Identities=17% Similarity=0.244 Sum_probs=26.3
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..+.||++|+ .|.+....++.|.+.|++|+||+|.
T Consensus 11 l~~~~vlVvG-----------GG~va~rka~~Ll~~ga~V~VIsp~ 45 (157)
T PRK06719 11 LHNKVVVIIG-----------GGKIAYRKASGLKDTGAFVTVVSPE 45 (157)
T ss_pred cCCCEEEEEC-----------CCHHHHHHHHHHHhCCCEEEEEcCc
Confidence 3456777774 2335677889999999999999765
No 398
>PRK08267 short chain dehydrogenase; Provisional
Probab=23.92 E-value=1e+02 Score=30.51 Aligned_cols=25 Identities=28% Similarity=0.367 Sum_probs=19.5
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++|++|.++...
T Consensus 10 sg~iG---~~la~~l~~~G~~V~~~~r~ 34 (260)
T PRK08267 10 ASGIG---RATALLFAAEGWRVGAYDIN 34 (260)
T ss_pred CchHH---HHHHHHHHHCCCeEEEEeCC
Confidence 45666 66788899999999988754
No 399
>PRK14569 D-alanyl-alanine synthetase A; Provisional
Probab=23.75 E-value=1.2e+02 Score=31.01 Aligned_cols=43 Identities=9% Similarity=-0.052 Sum_probs=30.3
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|.+|||+.+.....+. .--.-......+++|.+.||+|..+-.
T Consensus 1 ~~~~~i~vl~gg~s~e--~~vsl~s~~~v~~aL~~~g~~~~~~~~ 43 (296)
T PRK14569 1 MKNEKIVVLYGGDSPE--REVSLKSGKAVLDSLISQGYDAVGVDA 43 (296)
T ss_pred CCCcEEEEEeCCCCCc--hHhHHHHHHHHHHHHHHcCCEEEEEcC
Confidence 4578999998654443 222334566789999999999988743
No 400
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=23.66 E-value=3.7e+02 Score=27.25 Aligned_cols=122 Identities=14% Similarity=0.154 Sum_probs=68.9
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEE--EEEeCCchh---------HHHHHHHHHHHCCCceEEEeccChHHHH
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQI--IVLGTGKKP---------MEKQLEQLEILYPEKARGVAKFNIPLAH 472 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~l--vivG~g~~~---------~~~~l~~l~~~~~~~i~~~~~~~~~~~~ 472 (612)
-.-+++|.-.+.+-+..+.+++....+-..-+ .+...|+.. .-....+++.++
T Consensus 115 ~~~Vy~Gse~e~~~i~~~~~v~~~a~~~Gmp~v~~~YpRg~~~~~~~~~d~~~v~~aaRlaael---------------- 178 (265)
T COG1830 115 GATVYVGSETEREMIENISQVVEDAHELGMPLVAWAYPRGPAIKDEYHRDADLVGYAARLAAEL---------------- 178 (265)
T ss_pred EEEEecCCcchHHHHHHHHHHHHHHHHcCCceEEEEeccCCcccccccccHHHHHHHHHHHHHh----------------
Confidence 36788999888888888877777775533333 234444421 111222222222
Q ss_pred HHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCc----------ccceecCceEEEecccccccCCCCCCCH
Q 007224 473 MIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGL----------VDTVEEGFTGFQMGSFSVDCEAVDPVDV 540 (612)
Q Consensus 473 ~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~----------~e~v~~g~~G~l~~~~~~~~~~v~~~d~ 540 (612)
+||++=....- |.|--++ -+||+|||.+--+-. .+.+..|..|..+|.. .+.-.++
T Consensus 179 ----GADIiK~~ytg~~e~F~~vv---~~~~vpVviaGG~k~~~~~~~l~~~~~ai~aGa~G~~~GRN-----ifQ~~~p 246 (265)
T COG1830 179 ----GADIIKTKYTGDPESFRRVV---AACGVPVVIAGGPKTETEREFLEMVTAAIEAGAMGVAVGRN-----IFQHEDP 246 (265)
T ss_pred ----cCCeEeecCCCChHHHHHHH---HhCCCCEEEeCCCCCCChHHHHHHHHHHHHccCcchhhhhh-----hhccCCh
Confidence 45655433321 4443332 367899998853221 2234457777777643 3466788
Q ss_pred HHHHHHHHHHHHh
Q 007224 541 AAVSTTVRRALAT 553 (612)
Q Consensus 541 ~~la~~l~~ll~~ 553 (612)
+.++++|..++-+
T Consensus 247 ~~m~~Ai~~Ivhe 259 (265)
T COG1830 247 EAMVKAIQAIVHE 259 (265)
T ss_pred HHHHHHHHHHhcC
Confidence 8888888887754
No 401
>PRK13705 plasmid-partitioning protein SopA; Provisional
Probab=23.62 E-value=1e+02 Score=33.13 Aligned_cols=35 Identities=29% Similarity=0.312 Sum_probs=26.3
Q ss_pred CceEEEEeccccCccccccHHH--HhhhhHHHHHhCCCeEEEE
Q 007224 84 GLNILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~--~~~~La~~L~~~Gh~V~vi 124 (612)
+++|+-|... .||+|. .+..|+.+|+.+|++|.+|
T Consensus 105 ~~~vIai~n~------KGGVGKTT~a~nLA~~LA~~G~rVLlI 141 (388)
T PRK13705 105 FPPVIGVAAH------KGGVYKTSVSVHLAQDLALKGLRVLLV 141 (388)
T ss_pred CCeEEEEECC------CCCchHHHHHHHHHHHHHhcCCCeEEE
Confidence 4666666543 566665 5677999999999999988
No 402
>TIGR00853 pts-lac PTS system, lactose/cellobiose family IIB component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains.The Lac family includes several sequenced lactose (b-galactoside) permeases of Gram-positive bacteria as well as those in E. coli. While the Lac family usually consists of two polypeptide components IIA and IICB, the Chb permease of E. coli consists of three IIA, IIB and IIC. This family is specific for the IIB subunit of the Lac PTS family.
Probab=23.52 E-value=2.5e+02 Score=23.52 Aligned_cols=73 Identities=15% Similarity=0.169 Sum_probs=44.0
Q ss_pred EEEEeCCc--hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHH--HHcCCceEEcCC
Q 007224 435 IIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHA--MRYGTVPIVAST 509 (612)
Q Consensus 435 lvivG~g~--~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEA--ma~G~PvI~s~~ 509 (612)
++++|.|- .-+.+.+++..++.+..+. ....+..........+|+++..+... +-..-++. -.+|+||..-+.
T Consensus 7 Ll~C~~G~sSS~l~~k~~~~~~~~gi~~~-v~a~~~~~~~~~~~~~Dvill~pqi~-~~~~~i~~~~~~~~ipv~~I~~ 83 (95)
T TIGR00853 7 LLLCAAGMSTSLLVNKMNKAAEEYGVPVK-IAAGSYGAAGEKLDDADVVLLAPQVA-YMLPDLKKETDKKGIPVEVING 83 (95)
T ss_pred EEECCCchhHHHHHHHHHHHHHHCCCcEE-EEEecHHHHHhhcCCCCEEEECchHH-HHHHHHHHHhhhcCCCEEEeCh
Confidence 56777764 3355677777777664332 22334444555678899999876532 22333443 346789988764
No 403
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=23.50 E-value=95 Score=32.06 Aligned_cols=32 Identities=38% Similarity=0.547 Sum_probs=24.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++|+. |..| ..++..|++.||+|+++...
T Consensus 2 mkI~iiG~--------G~mG---~~~a~~L~~~g~~V~~~~r~ 33 (325)
T PRK00094 2 MKIAVLGA--------GSWG---TALAIVLARNGHDVTLWARD 33 (325)
T ss_pred CEEEEECC--------CHHH---HHHHHHHHhCCCEEEEEECC
Confidence 78999863 4444 55777899999999888654
No 404
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=23.47 E-value=84 Score=30.64 Aligned_cols=27 Identities=33% Similarity=0.455 Sum_probs=21.3
Q ss_pred cHHHHhhhhHHHHHhCCCeEEEEeecC
Q 007224 102 GLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (612)
|.|..=..|+..|++.||+|++-+.+.
T Consensus 8 GtGniG~alA~~~a~ag~eV~igs~r~ 34 (211)
T COG2085 8 GTGNIGSALALRLAKAGHEVIIGSSRG 34 (211)
T ss_pred ccChHHHHHHHHHHhCCCeEEEecCCC
Confidence 444444679999999999999998774
No 405
>TIGR00041 DTMP_kinase thymidylate kinase. Function: phosphorylation of DTMP to form DTDP in both de novo and salvage pathways of DTTP synthesis. Catalytic activity: ATP + thymidine 5'-phosphate = ADP + thymidine 5'-diphosphate.
Probab=23.41 E-value=1.3e+02 Score=28.44 Aligned_cols=38 Identities=24% Similarity=0.232 Sum_probs=29.0
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
++|-|++.+. | ..|-++.+..|++.|...|+.|.++..
T Consensus 2 ~g~~IvieG~---~---GsGKsT~~~~L~~~l~~~g~~v~~~~~ 39 (195)
T TIGR00041 2 RGMFIVIEGI---D---GAGKTTQANLLKKLLQENGYDVLFTRE 39 (195)
T ss_pred CceEEEEECC---C---CCCHHHHHHHHHHHHHHcCCeEEEEeC
Confidence 4555555553 2 789999999999999999999876543
No 406
>PRK10569 NAD(P)H-dependent FMN reductase; Provisional
Probab=23.38 E-value=1.4e+02 Score=28.54 Aligned_cols=38 Identities=13% Similarity=0.074 Sum_probs=26.5
Q ss_pred ceEEEEeccccCccccccHH-HHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~-~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||+.|+.. |. .++.. ..+....+.+.+.|++|+++-.
T Consensus 1 mkIl~I~GS--pr--~~S~t~~l~~~~~~~l~~~g~ev~~idL 39 (191)
T PRK10569 1 MRVITLAGS--PR--FPSRSSALLEYAREWLNGLGVEVYHWNL 39 (191)
T ss_pred CEEEEEEcC--CC--CCChHHHHHHHHHHHHHhCCCEEEEEEc
Confidence 899999976 43 34443 3445566677789999998854
No 407
>PRK06398 aldose dehydrogenase; Validated
Probab=23.37 E-value=1.1e+02 Score=30.26 Aligned_cols=25 Identities=20% Similarity=0.438 Sum_probs=19.2
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..++..|+++|++|.++...
T Consensus 15 s~gIG---~~ia~~l~~~G~~Vi~~~r~ 39 (258)
T PRK06398 15 SQGIG---KAVVNRLKEEGSNVINFDIK 39 (258)
T ss_pred CchHH---HHHHHHHHHCCCeEEEEeCC
Confidence 46777 55788899999999877543
No 408
>PRK06194 hypothetical protein; Provisional
Probab=23.36 E-value=1.1e+02 Score=30.79 Aligned_cols=24 Identities=21% Similarity=0.245 Sum_probs=18.6
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++|++|.++..
T Consensus 15 sggIG---~~la~~l~~~G~~V~~~~r 38 (287)
T PRK06194 15 ASGFG---LAFARIGAALGMKLVLADV 38 (287)
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEeC
Confidence 46666 5688889999999987754
No 409
>PRK07890 short chain dehydrogenase; Provisional
Probab=23.27 E-value=1.1e+02 Score=30.10 Aligned_cols=25 Identities=32% Similarity=0.325 Sum_probs=19.2
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..++..|+++|++|.++...
T Consensus 14 ~~~IG---~~la~~l~~~G~~V~~~~r~ 38 (258)
T PRK07890 14 GPGLG---RTLAVRAARAGADVVLAART 38 (258)
T ss_pred CCcHH---HHHHHHHHHcCCEEEEEeCC
Confidence 46777 56788899999999877643
No 410
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=23.24 E-value=96 Score=31.92 Aligned_cols=31 Identities=23% Similarity=0.415 Sum_probs=23.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||.||. +|.+-..|+..|++.||+|.++-.
T Consensus 1 M~Ig~IG-----------lG~mG~~la~~L~~~g~~V~~~dr 31 (298)
T TIGR00872 1 MQLGLIG-----------LGRMGANIVRRLAKRGHDCVGYDH 31 (298)
T ss_pred CEEEEEc-----------chHHHHHHHHHHHHCCCEEEEEEC
Confidence 6788875 344446689999999999988643
No 411
>cd05565 PTS_IIB_lactose PTS_IIB_lactose: subunit IIB of enzyme II (EII) of the lactose-specific phosphoenolpyruvate:carbohydrate phosphotransferase system (PTS) found in Firmicutes as well as Actinobacteria. In this system, EII is a lactose-specific permease with two cytoplasmic domains (IIA and IIB) and a transmembrane channel IIC domain. The IIC and IIB domains are expressed as a single protein from the lac operon. The IIB domain fold includes a central four-stranded parallel open twisted beta-sheet flanked by alpha-helices on both sides. The seven major PTS systems with this IIB fold include lactose, chitobiose/lichenan, ascorbate, galactitol, mannitol, fructose, and a sensory system with similarity to the bacterial bgl system.
Probab=23.11 E-value=3.1e+02 Score=23.26 Aligned_cols=73 Identities=10% Similarity=0.082 Sum_probs=45.2
Q ss_pred EEEEeCCc--hhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCCCCC-CCcHHHHHHHHcCCceEEcC
Q 007224 435 IIVLGTGK--KPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFE-PCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 435 lvivG~g~--~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E-~~gl~~lEAma~G~PvI~s~ 508 (612)
++++|.|- .-..+.+++..++.+..+. ....+..........+|+++.....- -+.-.--.+-.+|+||.+-+
T Consensus 4 ll~C~~GaSSs~la~km~~~a~~~gi~~~-i~a~~~~e~~~~~~~~Dvill~PQv~~~~~~i~~~~~~~~ipv~~I~ 79 (99)
T cd05565 4 LVLCAGGGTSGLLANALNKGAKERGVPLE-AAAGAYGSHYDMIPDYDLVILAPQMASYYDELKKDTDRLGIKLVTTT 79 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCcEE-EEEeeHHHHHHhccCCCEEEEcChHHHHHHHHHHHhhhcCCCEEEeC
Confidence 45666664 3467778888887764443 23445555667888999998866421 12222333445688988776
No 412
>PRK04148 hypothetical protein; Provisional
Probab=22.93 E-value=1e+02 Score=27.78 Aligned_cols=30 Identities=20% Similarity=0.236 Sum_probs=22.0
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
++||+-|+.. .+ ..++..|++.||+|+.+=
T Consensus 17 ~~kileIG~G---------fG---~~vA~~L~~~G~~ViaID 46 (134)
T PRK04148 17 NKKIVELGIG---------FY---FKVAKKLKESGFDVIVID 46 (134)
T ss_pred CCEEEEEEec---------CC---HHHHHHHHHCCCEEEEEE
Confidence 4789888742 11 236788999999999984
No 413
>TIGR03018 pepcterm_TyrKin exopolysaccharide/PEPCTERM locus tyrosine autokinase. Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Probab=22.85 E-value=1.5e+02 Score=28.54 Aligned_cols=40 Identities=20% Similarity=0.198 Sum_probs=27.6
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHh-CCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~ 127 (612)
.||++.|+..- ..-|.++....||.+|++ .|++|.+|=..
T Consensus 34 ~~~vi~v~s~k----gG~GkSt~a~nLA~~la~~~g~~VLlvD~D 74 (207)
T TIGR03018 34 NNNLIMVTSSL----PGEGKSFTAINLAISLAQEYDKTVLLIDAD 74 (207)
T ss_pred CCeEEEEECCC----CCCCHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 46666665421 134666777889999996 69999998543
No 414
>PRK06436 glycerate dehydrogenase; Provisional
Probab=22.79 E-value=2.4e+02 Score=29.20 Aligned_cols=44 Identities=27% Similarity=0.311 Sum_probs=32.1
Q ss_pred HHHHHHhcCEEEeC--CCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILIP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~p--S~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++. ..-|. ++-..+++|.-|.-+|-+..|++.+
T Consensus 167 l~ell~~aDiv~~~lp~t~~T~~li~~~~l~~mk~ga~lIN~sRG~~vd 215 (303)
T PRK06436 167 PEDIMKKSDFVLISLPLTDETRGMINSKMLSLFRKGLAIINVARADVVD 215 (303)
T ss_pred HHHHHhhCCEEEECCCCCchhhcCcCHHHHhcCCCCeEEEECCCccccC
Confidence 45689999998864 33344 4557899999998888887777554
No 415
>PRK05723 flavodoxin; Provisional
Probab=22.78 E-value=1.2e+02 Score=27.84 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=28.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
|||.++-.+ .+|-.+.+...|+..|.++|++|+++.
T Consensus 1 ~~i~I~ygS-----~tG~ae~~A~~la~~l~~~g~~~~~~~ 36 (151)
T PRK05723 1 MKVAILSGS-----VYGTAEEVARHAESLLKAAGFEAWHNP 36 (151)
T ss_pred CeEEEEEEc-----CchHHHHHHHHHHHHHHHCCCceeecC
Confidence 677777432 388899999999999999999998753
No 416
>PLN02778 3,5-epimerase/4-reductase
Probab=22.70 E-value=1e+02 Score=31.66 Aligned_cols=32 Identities=28% Similarity=0.295 Sum_probs=22.7
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEE
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vi 124 (612)
.+|||++++. .|-+| ..|++.|.++||+|++.
T Consensus 8 ~~~kiLVtG~-------tGfiG---~~l~~~L~~~g~~V~~~ 39 (298)
T PLN02778 8 ATLKFLIYGK-------TGWIG---GLLGKLCQEQGIDFHYG 39 (298)
T ss_pred CCCeEEEECC-------CCHHH---HHHHHHHHhCCCEEEEe
Confidence 3589887653 24444 56788899999999754
No 417
>PRK06057 short chain dehydrogenase; Provisional
Probab=22.67 E-value=1.1e+02 Score=30.04 Aligned_cols=36 Identities=25% Similarity=0.251 Sum_probs=24.8
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+++.+|++++. .||+| ..+++.|+++|++|.++...
T Consensus 5 ~~~~~vlItGa-------sggIG---~~~a~~l~~~G~~v~~~~r~ 40 (255)
T PRK06057 5 LAGRVAVITGG-------GSGIG---LATARRLAAEGATVVVGDID 40 (255)
T ss_pred CCCCEEEEECC-------CchHH---HHHHHHHHHcCCEEEEEeCC
Confidence 34455655543 46777 56778899999999887643
No 418
>PRK14495 putative molybdopterin-guanine dinucleotide biosynthesis protein MobB/unknown domain fusion protein; Provisional
Probab=22.63 E-value=1.2e+02 Score=33.14 Aligned_cols=38 Identities=24% Similarity=0.249 Sum_probs=31.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+-|+.. +..|-.+.+..|...|.++|++|-+|=..
T Consensus 1 MkVi~IvG~-----sgSGKTTLiekLI~~L~~rG~rVavIKH~ 38 (452)
T PRK14495 1 MRVYGIIGW-----KDAGKTGLVERLVAAIAARGFSVSTVKHS 38 (452)
T ss_pred CcEEEEEec-----CCCCHHHHHHHHHHHHHhCCCeEEEEecc
Confidence 777777643 36799999999999999999999998654
No 419
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=22.61 E-value=86 Score=30.95 Aligned_cols=36 Identities=31% Similarity=0.483 Sum_probs=26.9
Q ss_pred eEEEEeccccCccccccHHH--HhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGD--VLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~--~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+.|++. .||+|. ....|..+||.+|+.|.++=..
T Consensus 3 ~iIVvTSG------KGGVGKTTttAnig~aLA~~GkKv~liD~D 40 (272)
T COG2894 3 RIIVVTSG------KGGVGKTTTTANIGTALAQLGKKVVLIDFD 40 (272)
T ss_pred eEEEEecC------CCCcCccchhHHHHHHHHHcCCeEEEEecC
Confidence 46666653 576664 5566999999999999999654
No 420
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=22.60 E-value=1.4e+02 Score=26.87 Aligned_cols=28 Identities=29% Similarity=0.283 Sum_probs=22.3
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..|.+..+..||..|++.|++|.++-..
T Consensus 11 g~G~t~~a~~lA~~la~~~~~Vllid~~ 38 (157)
T PF13614_consen 11 GVGKTTLALNLAAALARKGKKVLLIDFD 38 (157)
T ss_dssp TSSHHHHHHHHHHHHHHTTT-EEEEE--
T ss_pred CCCHHHHHHHHHHHHHhcCCCeEEEECC
Confidence 5688889999999999999998888654
No 421
>PF13263 PHP_C: PHP-associated; PDB: 2Z4G_B 2YXO_B 2YZ5_A 3DCP_B.
Probab=22.60 E-value=32 Score=25.72 Aligned_cols=46 Identities=20% Similarity=0.226 Sum_probs=19.3
Q ss_pred HHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHH
Q 007224 493 IQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 493 ~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~ 548 (612)
+.--|..+|+|+++.+..-..+.|..+.+-|-. +..++++|.++|.
T Consensus 7 A~~~A~~~~lp~~~gSDAH~~~~vG~~~t~~~~----------~~~s~~~l~~alr 52 (56)
T PF13263_consen 7 AAELAEKYGLPFTGGSDAHFLEEVGRGYTEFEG----------PIRSPEELLEALR 52 (56)
T ss_dssp HHHHHHHTT--EEEE--BSSGGGTTTTHHHH-------------------------
T ss_pred HHHHHHHcCCCeEeEEcccChhhcCCEeeeccc----------ccccccccccccc
Confidence 344577899999999887777777665555532 4456677777664
No 422
>PRK08655 prephenate dehydrogenase; Provisional
Probab=22.52 E-value=90 Score=34.19 Aligned_cols=33 Identities=30% Similarity=0.519 Sum_probs=23.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++|+. .|++| ..++..|.+.||+|+++...
T Consensus 1 MkI~IIGG-------~G~mG---~slA~~L~~~G~~V~v~~r~ 33 (437)
T PRK08655 1 MKISIIGG-------TGGLG---KWFARFLKEKGFEVIVTGRD 33 (437)
T ss_pred CEEEEEec-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 67877742 14444 66888899999999888754
No 423
>PRK05854 short chain dehydrogenase; Provisional
Probab=22.52 E-value=1.3e+02 Score=31.14 Aligned_cols=33 Identities=33% Similarity=0.390 Sum_probs=24.1
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- ++|+| ..+++.|+++|++|.+++..
T Consensus 15 k~~lITGa------s~GIG---~~~a~~La~~G~~Vil~~R~ 47 (313)
T PRK05854 15 KRAVVTGA------SDGLG---LGLARRLAAAGAEVILPVRN 47 (313)
T ss_pred CEEEEeCC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45555532 57777 66788999999999887654
No 424
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=22.49 E-value=3.9e+02 Score=22.57 Aligned_cols=89 Identities=16% Similarity=0.212 Sum_probs=52.5
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEe
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILI 483 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~ 483 (612)
++++|-=.. | ...+.++... .++++++-+=+.. .+..++..++++ +. .++. ..++++ ..|++++
T Consensus 3 v~iiG~G~~--g-~~~~~~~~~~-~~~~~v~~v~d~~---~~~~~~~~~~~~--~~---~~~~--~~~ll~~~~~D~V~I 68 (120)
T PF01408_consen 3 VGIIGAGSI--G-RRHLRALLRS-SPDFEVVAVCDPD---PERAEAFAEKYG--IP---VYTD--LEELLADEDVDAVII 68 (120)
T ss_dssp EEEESTSHH--H-HHHHHHHHHT-TTTEEEEEEECSS---HHHHHHHHHHTT--SE---EESS--HHHHHHHTTESEEEE
T ss_pred EEEECCcHH--H-HHHHHHHHhc-CCCcEEEEEEeCC---HHHHHHHHHHhc--cc---chhH--HHHHHHhhcCCEEEE
Confidence 556665211 2 2234444443 2566766433333 234555566666 33 2222 334565 7899998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.+..+.-.-.+.+++..|++|++-.
T Consensus 69 ~tp~~~h~~~~~~~l~~g~~v~~EK 93 (120)
T PF01408_consen 69 ATPPSSHAEIAKKALEAGKHVLVEK 93 (120)
T ss_dssp ESSGGGHHHHHHHHHHTTSEEEEES
T ss_pred ecCCcchHHHHHHHHHcCCEEEEEc
Confidence 8877666778899999999988876
No 425
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=22.26 E-value=97 Score=31.67 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=23.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+|++++. .|++| ..|++.|.++||+|.++...
T Consensus 1 ~~vlItG~-------~G~iG---~~l~~~L~~~g~~V~~~~r~ 33 (328)
T TIGR03466 1 MKVLVTGA-------TGFVG---SAVVRLLLEQGEEVRVLVRP 33 (328)
T ss_pred CeEEEECC-------ccchh---HHHHHHHHHCCCEEEEEEec
Confidence 56665543 35555 55888899999999988754
No 426
>TIGR03010 sulf_tusC_dsrF sulfur relay protein TusC/DsrF. The three proteins TusB, TusC, and TusD form a heterohexamer responsible for a sulfur relay reaction. In large numbers of proteobacterial species, this complex acts on a Cys-derived persulfide moiety, delivered by the cysteine desulfurase IscS to TusA, then to TusBCD. The activated sulfur group is then transferred to TusE (DsrC), then by MnmA (TrmU) for modification of an anticodon nucleotide in tRNAs for Glu, Lys, and Gln. The sulfur relay complex TusBCD is also found, under the designation DsrEFH, in phototrophic and chemotrophic sulfur bacteria, such as Chromatium vinosum. In these organisms, it seems the primary purpose is related to sulfur flux, such as oxidation from sulfide to molecular sulfur to sulfate.
Probab=22.25 E-value=1.4e+02 Score=26.03 Aligned_cols=39 Identities=18% Similarity=0.016 Sum_probs=28.1
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||+||... .|+ .+-.+.-..+++-++++.+++|.++...
T Consensus 1 kil~i~~~-~Py--g~~~~~e~l~~al~~aa~~~eV~vff~~ 39 (116)
T TIGR03010 1 KLAFVFRQ-APH--GTASGREGLDALLAASAFDEDIGVFFID 39 (116)
T ss_pred CEEEEEcC-CCC--CcchHHHHHHHHHHHHhccCCeEEEEec
Confidence 58888876 675 2224444556688888999999999766
No 427
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=22.24 E-value=75 Score=29.48 Aligned_cols=29 Identities=28% Similarity=0.292 Sum_probs=23.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeecC
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (612)
.||.|..=..+++.|.++||+|++++.+.
T Consensus 4 ~GatG~vG~~l~~~L~~~~~~V~~~~R~~ 32 (183)
T PF13460_consen 4 FGATGFVGRALAKQLLRRGHEVTALVRSP 32 (183)
T ss_dssp ETTTSHHHHHHHHHHHHTTSEEEEEESSG
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEecCc
Confidence 35555555779999999999999999773
No 428
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=22.23 E-value=1.4e+02 Score=30.61 Aligned_cols=36 Identities=31% Similarity=0.448 Sum_probs=27.6
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
+..++||+++ ||.|-+-..|+..|...||+|.++=-
T Consensus 24 p~~~lrI~it----------GgaGFIgSHLvdkLm~egh~VIa~Dn 59 (350)
T KOG1429|consen 24 PSQNLRILIT----------GGAGFIGSHLVDKLMTEGHEVIALDN 59 (350)
T ss_pred CCCCcEEEEe----------cCcchHHHHHHHHHHhcCCeEEEEec
Confidence 4456899876 55565667799999999999998843
No 429
>PRK10446 ribosomal protein S6 modification protein; Provisional
Probab=22.01 E-value=1e+02 Score=31.66 Aligned_cols=35 Identities=20% Similarity=0.276 Sum_probs=27.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++.+..=+ ....+.+++.++||+|.++-+.
T Consensus 1 m~~~i~~~~~s~~--------s~~~~~~a~~~~g~~v~~i~~~ 35 (300)
T PRK10446 1 MKIAILSRDGTLY--------SCKRLREAAIQRGHLVEILDPL 35 (300)
T ss_pred CeEEEEecCCcch--------hHHHHHHHHHHcCCeEEEEehH
Confidence 7899998663221 3457999999999999999765
No 430
>PRK07588 hypothetical protein; Provisional
Probab=21.99 E-value=76 Score=33.79 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=23.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+|++|+.. .+|+. +|.+|+++|++|+++=..
T Consensus 1 ~~V~IVGgG------~aGl~-----~A~~L~~~G~~v~v~E~~ 32 (391)
T PRK07588 1 MKVAISGAG------IAGPT-----LAYWLRRYGHEPTLIERA 32 (391)
T ss_pred CeEEEECcc------HHHHH-----HHHHHHHCCCceEEEeCC
Confidence 678888753 34555 778899999999998543
No 431
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=21.90 E-value=1.6e+02 Score=30.10 Aligned_cols=32 Identities=25% Similarity=0.342 Sum_probs=19.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||||+++. -|..-..|...|. .+++|..++..
T Consensus 1 M~iLi~G~----------~GqLG~~L~~~l~-~~~~v~a~~~~ 32 (281)
T COG1091 1 MKILITGA----------NGQLGTELRRALP-GEFEVIATDRA 32 (281)
T ss_pred CcEEEEcC----------CChHHHHHHHHhC-CCceEEeccCc
Confidence 67666643 3334455666666 55787777654
No 432
>PF00185 OTCace: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; InterPro: IPR006131 This family contains two related enzymes: Aspartate carbamoyltransferase (2.1.3.2 from EC) (ATCase) catalyzes the conversion of aspartate and carbamoyl phosphate to carbamoylaspartate, the second step in the de novo biosynthesis of pyrimidine nucleotides []. In prokaryotes ATCase consists of two subunits: a catalytic chain (gene pyrB) and a regulatory chain (gene pyrI), while in eukaryotes it is a domain in a multi- functional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals []) that also catalyzes other steps of the biosynthesis of pyrimidines. Ornithine carbamoyltransferase (2.1.3.3 from EC) (OTCase) catalyzes the conversion of ornithine and carbamoyl phosphate to citrulline. In mammals this enzyme participates in the urea cycle [] and is located in the mitochondrial matrix. In prokaryotes and eukaryotic microorganisms it is involved in the biosynthesis of arginine. In some bacterial species it is also involved in the degradation of arginine [] (the arginine deaminase pathway). It has been shown [] that these two enzymes are evolutionary related. The predicted secondary structure of both enzymes are similar and there are some regions of sequence similarities. One of these regions includes three residues which have been shown, by crystallographic studies [], to be implicated in binding the phosphoryl group of carbamoyl phosphate and is described by IPR006132 from INTERPRO. The carboxyl-terminal, aspartate/ornithine-binding domain is connected to the amino-terminal domain by two alpha-helices, which comprise a hinge between domains [].; GO: 0016597 amino acid binding, 0016743 carboxyl- or carbamoyltransferase activity, 0006520 cellular amino acid metabolic process; PDB: 1ML4_A 4EP1_B 3Q98_A 3E2P_A 2RGW_E 4EKN_B 2G7M_E 3D6N_B 3M4J_A 3L06_A ....
Probab=21.89 E-value=4e+02 Score=24.53 Aligned_cols=75 Identities=11% Similarity=0.149 Sum_probs=47.5
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCch------hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK------PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~------~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ 477 (612)
..|.|+|- ....=..-++.++.++ +..+.+++...- .+.+..++...+.+..+... +...+.++.
T Consensus 3 l~i~~vGD-~~~rv~~Sl~~~~~~~---g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~g~~i~~~-----~~~~e~l~~ 73 (158)
T PF00185_consen 3 LKIAYVGD-GHNRVAHSLIELLAKF---GMEVVLIAPEGLRYPPDPEVLEKAKKNAKKNGGKITIT-----DDIEEALKG 73 (158)
T ss_dssp EEEEEESS-TTSHHHHHHHHHHHHT---TSEEEEESSGGGGGSHHHHHHHHHHHHHHHHTTEEEEE-----SSHHHHHTT
T ss_pred CEEEEECC-CCChHHHHHHHHHHHc---CCEEEEECCCcccCCCCHHHHHHHHHHHHHhCCCeEEE-----eCHHHhcCC
Confidence 47999996 4445567788888888 678889887541 12333344455555445443 224458999
Q ss_pred cCEEEeCCCC
Q 007224 478 ADFILIPSRF 487 (612)
Q Consensus 478 adi~l~pS~~ 487 (612)
||++......
T Consensus 74 aDvvy~~~~~ 83 (158)
T PF00185_consen 74 ADVVYTDRWQ 83 (158)
T ss_dssp -SEEEEESSS
T ss_pred CCEEEEcCcc
Confidence 9998877654
No 433
>PRK10818 cell division inhibitor MinD; Provisional
Probab=21.72 E-value=1.4e+02 Score=30.01 Aligned_cols=26 Identities=19% Similarity=0.298 Sum_probs=21.1
Q ss_pred cHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 102 GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|-.+.+..||.+|+++|++|.++=..
T Consensus 15 GKTt~a~nlA~~la~~g~~vllvD~D 40 (270)
T PRK10818 15 GKTTSSAAIATGLAQKGKKTVVIDFD 40 (270)
T ss_pred cHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 55567778999999999999888543
No 434
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=21.59 E-value=2.4e+02 Score=26.14 Aligned_cols=94 Identities=19% Similarity=0.211 Sum_probs=51.6
Q ss_pred EEEEEcCcccccCHHHHHHHH------HhcccCC-cEE-EEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH
Q 007224 405 VIGFIGRLEEQKGSDILAAAI------PHFIKEN-VQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~------~~l~~~~-~~l-vivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~ 476 (612)
+++.+|.-. +|.|+.+. .+|.+.. .+| +-+|.|...............+..+. ...|...+ .+.++
T Consensus 6 vFVTVGtT~----Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id-~y~f~psl-~e~I~ 79 (170)
T KOG3349|consen 6 VFVTVGTTS----FDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTID-GYDFSPSL-TEDIR 79 (170)
T ss_pred EEEEecccc----HHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEE-EEecCccH-HHHHh
Confidence 566666532 66666554 2232222 233 34677643333333333322222232 23455544 45888
Q ss_pred hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 477 ~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.||++|. . +-.-+++|-+..|+|.|+--
T Consensus 80 ~AdlVIs--H--AGaGS~letL~l~KPlivVv 107 (170)
T KOG3349|consen 80 SADLVIS--H--AGAGSCLETLRLGKPLIVVV 107 (170)
T ss_pred hccEEEe--c--CCcchHHHHHHcCCCEEEEe
Confidence 8999993 2 33457899999999988764
No 435
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=21.52 E-value=86 Score=33.39 Aligned_cols=33 Identities=24% Similarity=0.263 Sum_probs=24.0
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
+..+|++|+.- .+|+. +|.+|+++|++|+++=.
T Consensus 2 ~~~dv~IvGgG------~aGl~-----~A~~L~~~G~~v~l~E~ 34 (384)
T PRK08849 2 NKYDIAVVGGG------MVGAA-----TALGFAKQGRSVAVIEG 34 (384)
T ss_pred CcccEEEECcC------HHHHH-----HHHHHHhCCCcEEEEcC
Confidence 34578888743 24554 77789999999999953
No 436
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=21.49 E-value=8.5e+02 Score=24.59 Aligned_cols=93 Identities=18% Similarity=0.201 Sum_probs=56.5
Q ss_pred EEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCC
Q 007224 406 IGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPS 485 (612)
Q Consensus 406 il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS 485 (612)
++|.|. .+-|=|.+++++-+-..++.+++++...+... .+.++ +....+++....-..+..+|++|+..
T Consensus 4 ~GyyG~--~N~GDe~~l~~~l~~l~~~~~~~v~s~~p~~~-------~~~~~--v~~~~r~~~~~~~~~l~~~D~vI~gG 72 (298)
T TIGR03609 4 CGYYGF--GNLGDEALLAALLRELPPGVEPTVLSNDPAET-------AKLYG--VEAVNRRSLLAVLRALRRADVVIWGG 72 (298)
T ss_pred EEecCC--CCcchHHHHHHHHHhcCCCCeEEEecCChHHH-------HhhcC--ceEEccCCHHHHHHHHHHCCEEEECC
Confidence 444443 35577888888754445788888887665322 22333 44445565555556889999999863
Q ss_pred --CC-CC--Cc------HHHHHHHHcCCceEEcCC
Q 007224 486 --RF-EP--CG------LIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 486 --~~-E~--~g------l~~lEAma~G~PvI~s~~ 509 (612)
.+ +. +. ....-|..+|+|++.-..
T Consensus 73 G~l~~d~~~~~~~~~~~~~~~~a~~~~k~~~~~g~ 107 (298)
T TIGR03609 73 GSLLQDVTSFRSLLYYLGLMRLARLFGKPVILWGQ 107 (298)
T ss_pred cccccCCcccccHHHHHHHHHHHHHcCCCEEEEec
Confidence 22 22 11 123456678999987653
No 437
>PRK09072 short chain dehydrogenase; Provisional
Probab=21.48 E-value=1.3e+02 Score=29.85 Aligned_cols=25 Identities=40% Similarity=0.735 Sum_probs=19.6
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.+++..
T Consensus 14 s~~iG---~~ia~~l~~~G~~V~~~~r~ 38 (263)
T PRK09072 14 SGGIG---QALAEALAAAGARLLLVGRN 38 (263)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 35666 67888899999999888754
No 438
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=21.28 E-value=1.3e+02 Score=29.47 Aligned_cols=25 Identities=24% Similarity=0.400 Sum_probs=19.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..++..|+++|++|.++..+
T Consensus 13 ~g~iG---~~~a~~l~~~g~~v~~~~~r 37 (250)
T PRK08063 13 SRGIG---KAIALRLAEEGYDIAVNYAR 37 (250)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 46777 55888899999999876544
No 439
>PRK06197 short chain dehydrogenase; Provisional
Probab=21.26 E-value=1.5e+02 Score=30.30 Aligned_cols=25 Identities=36% Similarity=0.426 Sum_probs=19.4
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.+++..
T Consensus 25 s~gIG---~~~a~~l~~~G~~vi~~~r~ 49 (306)
T PRK06197 25 NTGLG---YETAAALAAKGAHVVLAVRN 49 (306)
T ss_pred CCcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 47777 56788899999998777643
No 440
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=21.24 E-value=1.2e+02 Score=31.75 Aligned_cols=36 Identities=36% Similarity=0.512 Sum_probs=28.4
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecC
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (612)
.++++|.++. .||+|.+.-.+|+|| |++|++|....
T Consensus 180 ~pG~~vgI~G--------lGGLGh~aVq~AKAM---G~rV~vis~~~ 215 (360)
T KOG0023|consen 180 GPGKWVGIVG--------LGGLGHMAVQYAKAM---GMRVTVISTSS 215 (360)
T ss_pred CCCcEEEEec--------CcccchHHHHHHHHh---CcEEEEEeCCc
Confidence 4567788776 478998888887766 99999998763
No 441
>PRK12742 oxidoreductase; Provisional
Probab=21.22 E-value=1.3e+02 Score=29.07 Aligned_cols=24 Identities=17% Similarity=0.349 Sum_probs=18.3
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++|++|.++..
T Consensus 15 sggIG---~~~a~~l~~~G~~v~~~~~ 38 (237)
T PRK12742 15 SRGIG---AAIVRRFVTDGANVRFTYA 38 (237)
T ss_pred CChHH---HHHHHHHHHCCCEEEEecC
Confidence 47777 5578889999999876643
No 442
>PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C.
Probab=21.19 E-value=1.4e+02 Score=31.57 Aligned_cols=78 Identities=12% Similarity=-0.003 Sum_probs=49.4
Q ss_pred HHHHHHhcCEEEeCCCC--CCCcH-HHHHHHHcCCceEEcC--CCCcccceecCceEEEecccccccCCCCCCCHHHHHH
Q 007224 471 AHMIIAGADFILIPSRF--EPCGL-IQLHAMRYGTVPIVAS--TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVST 545 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~--E~~gl-~~lEAma~G~PvI~s~--~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~ 545 (612)
..++++...+++..=.. +.+=. ++.+|+.+|+.+|.-. ...+.+++.. ..-+.+ -+-.++++||+
T Consensus 221 ~~~~~~~ykF~lafENs~c~dYiTEK~~~al~~g~VPI~~G~~~~~~~~~~P~-~SfI~~---------~df~s~~~La~ 290 (349)
T PF00852_consen 221 KLELLSKYKFYLAFENSNCPDYITEKFWNALLAGTVPIYWGPPRPNYEEFAPP-NSFIHV---------DDFKSPKELAD 290 (349)
T ss_dssp HHHHHHTEEEEEEE-SS--TT---HHHHHHHHTTSEEEEES---TTHHHHS-G-GGSEEG---------GGSSSHHHHHH
T ss_pred ccccccCcEEEEEecCCCCCCCCCHHHHHHHHCCeEEEEECCEecccccCCCC-CCccch---------hcCCCHHHHHH
Confidence 44577777777753222 22222 5789999999999887 5566677665 233332 14468999999
Q ss_pred HHHHHHHhhCHHHHH
Q 007224 546 TVRRALATYGTQALA 560 (612)
Q Consensus 546 ~l~~ll~~~~~~~~~ 560 (612)
.|..+.+| ++++.
T Consensus 291 yl~~l~~n--~~~Y~ 303 (349)
T PF00852_consen 291 YLKYLDKN--DELYN 303 (349)
T ss_dssp HHHHHHT---HHHHH
T ss_pred HHHHHhcC--HHHHh
Confidence 99999988 55544
No 443
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=21.10 E-value=1e+02 Score=31.72 Aligned_cols=30 Identities=27% Similarity=0.449 Sum_probs=22.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
|||.||. +|.+-..++..|.+.||+|.++.
T Consensus 1 m~Ig~IG-----------lG~MG~~ma~~L~~~G~~v~v~~ 30 (292)
T PRK15059 1 MKLGFIG-----------LGIMGTPMAINLARAGHQLHVTT 30 (292)
T ss_pred CeEEEEc-----------cCHHHHHHHHHHHHCCCeEEEEe
Confidence 6788875 34445678999999999998764
No 444
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=21.01 E-value=1.9e+02 Score=31.33 Aligned_cols=44 Identities=30% Similarity=0.431 Sum_probs=32.7
Q ss_pred HHHHHHhcCEEEe--CCCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILI--PSRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~--pS~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++ |..-|+ ++-..+..|--|.-+|-+.-|++.|
T Consensus 197 l~ell~~sDiVslh~Plt~~T~~li~~~~l~~mk~ga~lIN~aRG~~vd 245 (409)
T PRK11790 197 LEELLAQSDVVSLHVPETPSTKNMIGAEELALMKPGAILINASRGTVVD 245 (409)
T ss_pred HHHHHhhCCEEEEcCCCChHHhhccCHHHHhcCCCCeEEEECCCCcccC
Confidence 5679999999876 333344 4455888888899888888887664
No 445
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=20.87 E-value=1.5e+02 Score=30.36 Aligned_cols=34 Identities=21% Similarity=0.231 Sum_probs=23.6
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+|++.+. +|.+| ..|++.|.++||+|.+++..
T Consensus 4 ~~~ilVtGa-------tGfIG---~~l~~~L~~~g~~V~~~~r~ 37 (322)
T PLN02662 4 GKVVCVTGA-------SGYIA---SWLVKLLLQRGYTVKATVRD 37 (322)
T ss_pred CCEEEEECC-------hHHHH---HHHHHHHHHCCCEEEEEEcC
Confidence 567665432 24444 55788899999999887654
No 446
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=20.86 E-value=1e+02 Score=34.27 Aligned_cols=33 Identities=21% Similarity=0.353 Sum_probs=25.7
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
|+.|++++|..- .||+. -|-.|+++|++|+|+=
T Consensus 1 ~~~~dvvVIGaG------~~GL~-----aAa~LA~~G~~V~VlE 33 (487)
T COG1233 1 MPMYDVVVIGAG------LNGLA-----AAALLARAGLKVTVLE 33 (487)
T ss_pred CCCccEEEECCC------hhHHH-----HHHHHHhCCCEEEEEE
Confidence 456889999864 46666 5566999999999994
No 447
>PRK08226 short chain dehydrogenase; Provisional
Probab=20.83 E-value=1.3e+02 Score=29.68 Aligned_cols=25 Identities=20% Similarity=0.476 Sum_probs=19.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 15 s~giG---~~la~~l~~~G~~Vv~~~r~ 39 (263)
T PRK08226 15 LQGIG---EGIARVFARHGANLILLDIS 39 (263)
T ss_pred CChHH---HHHHHHHHHCCCEEEEecCC
Confidence 46666 55888899999998877543
No 448
>PF00142 Fer4_NifH: 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family; InterPro: IPR000392 This entry represents members of the NifH/BchL/ChlL family. Nitrogen fixing bacteria possess a nitrogenase enzyme complex that catalyses the reduction of molecular nitrogen to ammonia [, , ]. The nitrogenase enzyme complex consists of two components: Component I is nitrogenase MoFe protein or dinitrogenase, which contains 2 molecules each of 2 non-identical subunits. Component II is nitrogenase Fe protein or dinitrogenase reductase, which is a homodimer. The monomer is encoded by the nifH gene []. Component II has 2 ATP-binding domains and one 4Fe-4S cluster per homodimer: it supplies energy by ATP hydrolysis, and transfers electrons from reduced ferredoxin or flavodoxin to component I for the reduction of molecular nitrogen to ammonia []. There are a number of conserved regions in the sequence of these proteins: in the N-terminal section there is an ATP-binding site motif 'A' (P-loop) IPR001687 from INTERPRO and in the central section there are two conserved cysteines which have been shown, in nifH, to be the ligands of the 4Fe-4S cluster. Protochlorophyllide reductase is involved in light-independent chlorophyll biosynthesis. The light-independent reaction uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This enzyme complex is composed of three subunits: ChlL, ChlN and ChlB. ChlL is present as a homodimer, and binds one 4Fe-4S cluster per dimer. The conserved domains, including the ATP-binding motif and the Fe-S binding motif found in the three subunits, are similar to those in nitrogenases []. ; GO: 0005524 ATP binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1CP2_A 2AFI_F 1N2C_F 1FP6_C 2AFK_G 1M34_M 1XD8_A 1NIP_A 1M1Y_N 1G21_H ....
Probab=20.81 E-value=1.1e+02 Score=31.04 Aligned_cols=27 Identities=33% Similarity=0.555 Sum_probs=19.5
Q ss_pred cccH--HHHhhhhHHHHHhCCCeEEEEee
Q 007224 100 TGGL--GDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~--~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.||+ ++....|+-+|+++|++|+.+--
T Consensus 8 KGGIGKST~~~Nlsaala~~G~kVl~iGC 36 (273)
T PF00142_consen 8 KGGIGKSTTASNLSAALAEMGKKVLQIGC 36 (273)
T ss_dssp STTSSHHHHHHHHHHHHHHTT--EEEEEE
T ss_pred CCCcccChhhhHHHHHHHhccceeeEecc
Confidence 3555 45566799999999999999963
No 449
>PRK06703 flavodoxin; Provisional
Probab=20.81 E-value=1.5e+02 Score=26.74 Aligned_cols=38 Identities=21% Similarity=0.203 Sum_probs=29.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+++-.+ .+|....+...++..|.+.|++|.+.-..
T Consensus 2 mkv~IiY~S-----~tGnT~~iA~~ia~~l~~~g~~v~~~~~~ 39 (151)
T PRK06703 2 AKILIAYAS-----MSGNTEDIADLIKVSLDAFDHEVVLQEMD 39 (151)
T ss_pred CeEEEEEEC-----CCchHHHHHHHHHHHHHhcCCceEEEehh
Confidence 676666432 37999999999999999999999887543
No 450
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=20.79 E-value=1.1e+02 Score=31.10 Aligned_cols=32 Identities=34% Similarity=0.470 Sum_probs=23.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||.+|+. | .+=..++.+|.++||+|.++..+
T Consensus 1 m~I~IIG~--------G---~mG~sla~~L~~~g~~V~~~d~~ 32 (279)
T PRK07417 1 MKIGIVGL--------G---LIGGSLGLDLRSLGHTVYGVSRR 32 (279)
T ss_pred CeEEEEee--------c---HHHHHHHHHHHHCCCEEEEEECC
Confidence 67888752 2 23366888899999999888654
No 451
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=20.71 E-value=94 Score=31.95 Aligned_cols=32 Identities=34% Similarity=0.474 Sum_probs=22.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|++|+.. .+|+. +|..|+++|++|+|+=.+
T Consensus 2 ~dV~IvGaG------~aGl~-----~A~~L~~~G~~v~i~E~~ 33 (356)
T PF01494_consen 2 YDVAIVGAG------PAGLA-----AALALARAGIDVTIIERR 33 (356)
T ss_dssp EEEEEE--S------HHHHH-----HHHHHHHTTCEEEEEESS
T ss_pred ceEEEECCC------HHHHH-----HHHHHHhcccccccchhc
Confidence 468888753 35555 888999999999999543
No 452
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=20.65 E-value=70 Score=34.12 Aligned_cols=21 Identities=33% Similarity=0.409 Sum_probs=18.5
Q ss_pred hhhhHHHHHhCCCeEEEEeec
Q 007224 107 LGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 107 ~~~La~~L~~~Gh~V~vit~~ 127 (612)
.-.|+++|.++||+|+++++.
T Consensus 12 ~l~lA~~L~~~Gh~V~~~~~~ 32 (392)
T TIGR01426 12 TLGVVEELVARGHRVTYATTE 32 (392)
T ss_pred cHHHHHHHHhCCCeEEEEeCH
Confidence 356899999999999999985
No 453
>PRK06523 short chain dehydrogenase; Provisional
Probab=20.61 E-value=1.3e+02 Score=29.65 Aligned_cols=25 Identities=36% Similarity=0.484 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 18 s~gIG---~~ia~~l~~~G~~v~~~~r~ 42 (260)
T PRK06523 18 TKGIG---AATVARLLEAGARVVTTARS 42 (260)
T ss_pred CCchh---HHHHHHHHHCCCEEEEEeCC
Confidence 47777 56888899999998887643
No 454
>PRK04155 chaperone protein HchA; Provisional
Probab=20.51 E-value=1.8e+02 Score=29.99 Aligned_cols=46 Identities=15% Similarity=0.026 Sum_probs=27.8
Q ss_pred CCCceEEEEeccccCcc-cc-----ccHHHHhh-hhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWS-KT-----GGLGDVLG-GLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~-~~-----GG~~~~~~-~La~~L~~~Gh~V~vit~~ 127 (612)
..++|||+|.+...-.. .. -|....-. .-...|.+.|++|+++++.
T Consensus 47 ~~~kkiL~v~t~~~~~~~~~g~~~~tG~~~~E~~~P~~~L~~AG~eVdiAS~~ 99 (287)
T PRK04155 47 RGGKKILMIAADERYLPMDNGKLFSTGNHPVETLLPMYHLHKAGFEFDVATLS 99 (287)
T ss_pred CCCCeEEEEEcCcccccCCCCCcCCCCccHHHHHHHHHHHHHCCCEEEEEecC
Confidence 34569999998643321 11 22222211 1235578999999999986
No 455
>PRK08605 D-lactate dehydrogenase; Validated
Probab=20.45 E-value=3.4e+02 Score=28.45 Aligned_cols=44 Identities=20% Similarity=0.280 Sum_probs=32.0
Q ss_pred HHHHHHhcCEEEeC--CCCCCC---cHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILIP--SRFEPC---GLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~p--S~~E~~---gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++. ...+.- +...++.|.-|..+|-+..|+..+
T Consensus 194 l~ell~~aDvIvl~lP~t~~t~~li~~~~l~~mk~gailIN~sRG~~vd 242 (332)
T PRK08605 194 IEEAVEGADIVTLHMPATKYNHYLFNADLFKHFKKGAVFVNCARGSLVD 242 (332)
T ss_pred HHHHHHhCCEEEEeCCCCcchhhhcCHHHHhcCCCCcEEEECCCCcccC
Confidence 45689999998864 444443 345788899999888888887654
No 456
>PLN02256 arogenate dehydrogenase
Probab=20.39 E-value=1.5e+02 Score=30.77 Aligned_cols=37 Identities=27% Similarity=0.366 Sum_probs=27.1
Q ss_pred ccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..+.+|||++|+. |.+| ..++..|.+.|++|.++.+.
T Consensus 32 ~~~~~~kI~IIG~--------G~mG---~slA~~L~~~G~~V~~~d~~ 68 (304)
T PLN02256 32 EKSRKLKIGIVGF--------GNFG---QFLAKTFVKQGHTVLATSRS 68 (304)
T ss_pred ccCCCCEEEEEee--------CHHH---HHHHHHHHhCCCEEEEEECc
Confidence 3456799999962 4444 45888888999999887654
No 457
>PRK07825 short chain dehydrogenase; Provisional
Probab=20.36 E-value=1.4e+02 Score=29.82 Aligned_cols=25 Identities=36% Similarity=0.311 Sum_probs=19.2
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..+++.|+++|++|.++...
T Consensus 14 sggiG---~~la~~l~~~G~~v~~~~r~ 38 (273)
T PRK07825 14 ARGIG---LATARALAALGARVAIGDLD 38 (273)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 47777 66788899999998877543
No 458
>COG0132 BioD Dethiobiotin synthetase [Coenzyme metabolism]
Probab=20.22 E-value=1.6e+02 Score=29.02 Aligned_cols=40 Identities=25% Similarity=0.233 Sum_probs=31.9
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||.+||+.+ ...=|-..+...|+++|.++|++|..+=|-
T Consensus 1 m~~~~fVtGT----DT~VGKTv~S~aL~~~l~~~g~~~~~~KPV 40 (223)
T COG0132 1 MMKRFFVTGT----DTGVGKTVVSAALAQALKQQGYSVAGYKPV 40 (223)
T ss_pred CCceEEEEeC----CCCccHHHHHHHHHHHHHhCCCeeEEECce
Confidence 3788999875 123377888889999999999999988664
No 459
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=20.19 E-value=1.1e+02 Score=31.57 Aligned_cols=26 Identities=31% Similarity=0.452 Sum_probs=20.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
+||.|-.=...+.+|.+.||+|.|+=
T Consensus 6 tGGAGYIGSHtv~~Ll~~G~~vvV~D 31 (329)
T COG1087 6 TGGAGYIGSHTVRQLLKTGHEVVVLD 31 (329)
T ss_pred ecCcchhHHHHHHHHHHCCCeEEEEe
Confidence 47777444457888999999999983
No 460
>PF00533 BRCT: BRCA1 C Terminus (BRCT) domain; InterPro: IPR001357 The BRCT domain (after the C_terminal domain of a breast cancer susceptibility protein) is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage [], for example as found in the breast cancer DNA-repair protein BRCA1. The domain is an approximately 100 amino acid tandem repeat, which appears to act as a phospho-protein binding domain []. A chitin biosynthesis protein from yeast also seems to belong to this group. ; GO: 0005622 intracellular; PDB: 3L46_A 3AL3_A 3AL2_A 1WF6_A 3II6_X 2NTE_B 3FA2_A 2R1Z_A 2COK_A 2K7F_A ....
Probab=20.16 E-value=97 Score=23.97 Aligned_cols=66 Identities=11% Similarity=0.033 Sum_probs=45.5
Q ss_pred CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 431 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 431 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.++.|.+ +.....-.+.++++..++++.+. ..+-...+.+|+... ........+|...|.|+|..+
T Consensus 7 ~g~~f~i-~~~~~~~~~~l~~~i~~~GG~v~----------~~~~~~~thvI~~~~-~~~~~k~~~~~~~~i~iV~~~ 72 (78)
T PF00533_consen 7 EGCTFCI-SGFDSDEREELEQLIKKHGGTVS----------NSFSKKTTHVIVGNP-NKRTKKYKAAIANGIPIVSPD 72 (78)
T ss_dssp TTEEEEE-SSTSSSHHHHHHHHHHHTTEEEE----------SSSSTTSSEEEESSS-HCCCHHHHHHHHTTSEEEETH
T ss_pred CCEEEEE-ccCCCCCHHHHHHHHHHcCCEEE----------eecccCcEEEEeCCC-CCccHHHHHHHHCCCeEecHH
Confidence 4778888 44444567888999999886441 123456677776544 345667999999999999764
No 461
>PRK09135 pteridine reductase; Provisional
Probab=20.15 E-value=1.4e+02 Score=28.93 Aligned_cols=25 Identities=28% Similarity=0.368 Sum_probs=19.7
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 15 ~g~iG---~~l~~~l~~~g~~v~~~~r~ 39 (249)
T PRK09135 15 ARRIG---AAIARTLHAAGYRVAIHYHR 39 (249)
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 46666 56778899999999888764
No 462
>PRK05568 flavodoxin; Provisional
Probab=20.14 E-value=1.6e+02 Score=26.10 Aligned_cols=28 Identities=18% Similarity=0.195 Sum_probs=24.6
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|....++..+++.+.+.|++|.++-..
T Consensus 12 ~GnT~~~a~~i~~~~~~~g~~v~~~~~~ 39 (142)
T PRK05568 12 TGNTEAMANLIAEGAKENGAEVKLLNVS 39 (142)
T ss_pred CchHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 6999999999999999999999888543
No 463
>PF00205 TPP_enzyme_M: Thiamine pyrophosphate enzyme, central domain; InterPro: IPR012000 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This central domain of TPP enzymes contains a 2-fold Rossman fold. ; GO: 0000287 magnesium ion binding, 0030976 thiamine pyrophosphate binding; PDB: 1OZH_C 1OZF_B 1OZG_B 2Q29_B 2Q28_A 2Q27_B 1OVM_B 1PVD_A 1PYD_B 2VK1_C ....
Probab=20.10 E-value=3e+02 Score=24.27 Aligned_cols=18 Identities=28% Similarity=0.379 Sum_probs=14.0
Q ss_pred ChHHHHHHHHhcCEEEeC
Q 007224 467 NIPLAHMIIAGADFILIP 484 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~p 484 (612)
..+...+++..||++|+-
T Consensus 67 ~~~~~~~~l~~aDlvl~i 84 (137)
T PF00205_consen 67 GSPAANEALEQADLVLAI 84 (137)
T ss_dssp SCHHHHHHHHHSSEEEEE
T ss_pred CCHHHHHHhcCCCEEEEE
Confidence 355666799999999874
No 464
>PRK08309 short chain dehydrogenase; Provisional
Probab=20.07 E-value=1.4e+02 Score=28.13 Aligned_cols=22 Identities=32% Similarity=0.371 Sum_probs=17.9
Q ss_pred HhhhhHHHHHhCCCeEEEEeec
Q 007224 106 VLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 106 ~~~~La~~L~~~Gh~V~vit~~ 127 (612)
....++..|+++|++|.+++.+
T Consensus 11 ~gg~la~~L~~~G~~V~v~~R~ 32 (177)
T PRK08309 11 MLKRVSLWLCEKGFHVSVIARR 32 (177)
T ss_pred HHHHHHHHHHHCcCEEEEEECC
Confidence 4456999999999999988643
No 465
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=20.04 E-value=7.4e+02 Score=24.43 Aligned_cols=85 Identities=19% Similarity=0.170 Sum_probs=57.3
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc-hhHHHHHHHHHHHCCCceE-EEeccCh-HHHHHHHHh-cC
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLEQLEILYPEKAR-GVAKFNI-PLAHMIIAG-AD 479 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~-~~~~~~l~~l~~~~~~~i~-~~~~~~~-~~~~~~l~~-ad 479 (612)
|++.+-.+-+..+.++.|.+++..+ ++.-++.|.-. ......++.++.+.+.+.. ...+.+. +++.+++.. .+
T Consensus 61 ~l~~~~~~g~~e~eve~L~~~l~~l---~~d~iv~GaI~s~yqk~rve~lc~~lGl~~~~PLWg~d~~ell~e~~~~Gf~ 137 (223)
T COG2102 61 PLVTFDTSGEEEREVEELKEALRRL---KVDGIVAGAIASEYQKERVERLCEELGLKVYAPLWGRDPEELLEEMVEAGFE 137 (223)
T ss_pred ceEEEecCccchhhHHHHHHHHHhC---cccEEEEchhhhHHHHHHHHHHHHHhCCEEeecccCCCHHHHHHHHHHcCCe
Confidence 3555555667889999999999999 48888999854 3456778888888874332 2223343 444445544 78
Q ss_pred EEEeCCCCCCCc
Q 007224 480 FILIPSRFEPCG 491 (612)
Q Consensus 480 i~l~pS~~E~~g 491 (612)
++|+-...++++
T Consensus 138 ~~Iv~Vsa~gL~ 149 (223)
T COG2102 138 AIIVAVSAEGLD 149 (223)
T ss_pred EEEEEEeccCCC
Confidence 888766555544
No 466
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=20.04 E-value=95 Score=34.30 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=22.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++.. .-|++ -|..|+++||+|+++=.+
T Consensus 1 ~rVai~GaG------~AgL~-----~a~~La~~g~~vt~~ea~ 32 (485)
T COG3349 1 MRVAIAGAG------LAGLA-----AAYELADAGYDVTLYEAR 32 (485)
T ss_pred CeEEEEccc------HHHHH-----HHHHHHhCCCceEEEecc
Confidence 678877632 12333 567899999999999655
No 467
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=20.02 E-value=1e+02 Score=32.98 Aligned_cols=33 Identities=21% Similarity=0.277 Sum_probs=25.8
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.+||++| ||.|.+=..++..|.++||+|+++..
T Consensus 98 ~~~I~Ii----------GG~GlmG~slA~~l~~~G~~V~~~d~ 130 (374)
T PRK11199 98 LRPVVIV----------GGKGQLGRLFAKMLTLSGYQVRILEQ 130 (374)
T ss_pred cceEEEE----------cCCChhhHHHHHHHHHCCCeEEEeCC
Confidence 4778877 44555557899999999999999864
No 468
>PRK06914 short chain dehydrogenase; Provisional
Probab=20.01 E-value=1.4e+02 Score=29.80 Aligned_cols=25 Identities=24% Similarity=0.247 Sum_probs=19.3
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..++..|+++|++|.+++..
T Consensus 12 sg~iG---~~la~~l~~~G~~V~~~~r~ 36 (280)
T PRK06914 12 SSGFG---LLTTLELAKKGYLVIATMRN 36 (280)
T ss_pred CchHH---HHHHHHHHhCCCEEEEEeCC
Confidence 46666 66788899999999888644
Done!