Query 007224
Match_columns 612
No_of_seqs 276 out of 3261
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 20:21:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007224.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007224hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vue_A GBSS-I, granule-bound s 100.0 9.1E-83 3.1E-87 708.3 50.7 529 83-612 8-536 (536)
2 2qzs_A Glycogen synthase; glyc 100.0 7.5E-50 2.6E-54 439.1 45.2 462 85-590 1-479 (485)
3 1rzu_A Glycogen synthase 1; gl 100.0 8.5E-50 2.9E-54 438.7 42.6 464 85-591 1-479 (485)
4 3fro_A GLGA glycogen synthase; 100.0 4.1E-47 1.4E-51 409.8 42.0 423 83-589 1-432 (439)
5 3c48_A Predicted glycosyltrans 100.0 3.5E-41 1.2E-45 364.7 39.9 403 73-592 9-430 (438)
6 2r60_A Glycosyl transferase, g 100.0 1.2E-40 4.2E-45 367.4 36.9 411 84-593 7-465 (499)
7 3okp_A GDP-mannose-dependent a 100.0 2.5E-40 8.5E-45 351.9 34.7 369 82-593 2-385 (394)
8 2jjm_A Glycosyl transferase, g 100.0 3.6E-38 1.2E-42 336.6 35.0 368 85-590 14-388 (394)
9 3s28_A Sucrose synthase 1; gly 100.0 4.4E-39 1.5E-43 369.2 29.4 427 84-589 278-771 (816)
10 2x6q_A Trehalose-synthase TRET 100.0 1E-37 3.6E-42 335.5 32.8 363 82-588 38-415 (416)
11 2gek_A Phosphatidylinositol ma 100.0 1E-37 3.6E-42 333.3 29.5 367 79-591 15-387 (406)
12 2iw1_A Lipopolysaccharide core 100.0 1.5E-38 5.3E-43 335.9 20.7 362 85-588 1-372 (374)
13 3oy2_A Glycosyltransferase B73 100.0 2.4E-37 8.1E-42 332.2 29.6 357 85-591 1-394 (413)
14 2iuy_A Avigt4, glycosyltransfe 100.0 1.7E-37 5.7E-42 325.1 25.7 317 82-591 1-339 (342)
15 3nb0_A Glycogen [starch] synth 100.0 1.7E-36 6E-41 333.3 23.8 445 87-590 30-636 (725)
16 2x0d_A WSAF; GT4 family, trans 100.0 6.1E-33 2.1E-37 298.9 15.8 355 81-588 43-410 (413)
17 1f0k_A MURG, UDP-N-acetylgluco 100.0 4.1E-29 1.4E-33 263.2 25.9 337 85-588 7-358 (364)
18 2hy7_A Glucuronosyltransferase 100.0 7.8E-30 2.7E-34 274.2 19.6 203 308-589 169-381 (406)
19 1l5w_A Maltodextrin phosphoryl 100.0 7.2E-28 2.5E-32 269.0 26.4 363 201-589 272-732 (796)
20 2c4m_A Glycogen phosphorylase; 100.0 3.8E-28 1.3E-32 271.2 22.1 374 201-589 262-721 (796)
21 1uqt_A Alpha, alpha-trehalose- 100.0 3.3E-27 1.1E-31 258.1 28.3 293 229-587 124-454 (482)
22 3beo_A UDP-N-acetylglucosamine 100.0 4.8E-27 1.6E-31 248.2 26.6 224 310-585 142-374 (375)
23 1vgv_A UDP-N-acetylglucosamine 100.0 4.7E-27 1.6E-31 249.3 23.1 281 228-588 86-377 (384)
24 2vsy_A XCC0866; transferase, g 100.0 5.2E-27 1.8E-31 262.5 24.3 212 317-592 328-564 (568)
25 2bfw_A GLGA glycogen synthase; 99.9 1.3E-25 4.3E-30 216.3 21.0 184 353-567 1-193 (200)
26 3t5t_A Putative glycosyltransf 99.9 1.5E-24 5.1E-29 235.0 29.0 294 229-590 150-476 (496)
27 2gj4_A Glycogen phosphorylase, 99.9 2.8E-25 9.5E-30 249.0 18.9 341 228-589 320-756 (824)
28 3qhp_A Type 1 capsular polysac 99.9 3.4E-24 1.2E-28 200.0 17.9 159 404-579 3-166 (166)
29 1v4v_A UDP-N-acetylglucosamine 99.9 6.6E-22 2.3E-26 209.2 32.8 219 315-590 144-367 (376)
30 2f9f_A First mannosyl transfer 99.9 6.3E-21 2.1E-25 180.5 17.4 142 401-555 21-164 (177)
31 2xci_A KDO-transferase, 3-deox 99.8 4.4E-20 1.5E-24 195.9 19.1 187 310-553 146-346 (374)
32 3rhz_A GTF3, nucleotide sugar 99.8 3.9E-18 1.3E-22 177.9 26.0 244 228-580 74-329 (339)
33 3dzc_A UDP-N-acetylglucosamine 99.8 5.8E-18 2E-22 180.9 26.3 230 310-585 158-395 (396)
34 3ot5_A UDP-N-acetylglucosamine 99.8 1.1E-17 3.7E-22 179.2 28.3 226 311-589 162-393 (403)
35 3otg_A CALG1; calicheamicin, T 99.8 3.4E-18 1.2E-22 182.8 19.6 159 403-586 243-409 (412)
36 3s2u_A UDP-N-acetylglucosamine 99.7 7E-15 2.4E-19 155.3 27.3 161 405-584 183-355 (365)
37 2iyf_A OLED, oleandomycin glyc 99.7 6.6E-15 2.2E-19 158.4 22.9 161 402-588 232-402 (430)
38 4fzr_A SSFS6; structural genom 99.6 1.4E-15 4.7E-20 162.1 16.8 153 402-582 227-397 (398)
39 3tsa_A SPNG, NDP-rhamnosyltran 99.6 1.1E-14 3.7E-19 154.6 16.4 158 403-585 219-388 (391)
40 3ia7_A CALG4; glycosysltransfe 99.6 4.8E-13 1.7E-17 141.9 25.0 157 402-586 231-399 (402)
41 3oti_A CALG3; calicheamicin, T 99.5 1.8E-13 6.3E-18 145.7 20.3 153 403-584 233-396 (398)
42 3rsc_A CALG2; TDP, enediyne, s 99.5 5.2E-12 1.8E-16 134.9 23.7 157 402-586 247-414 (415)
43 2p6p_A Glycosyl transferase; X 99.5 1.4E-11 4.9E-16 130.2 26.1 153 403-584 211-378 (384)
44 4hwg_A UDP-N-acetylglucosamine 99.4 2E-12 6.9E-17 137.2 18.5 194 312-553 140-342 (385)
45 2yjn_A ERYCIII, glycosyltransf 99.3 1.6E-10 5.6E-15 124.7 19.4 154 404-585 269-435 (441)
46 2iya_A OLEI, oleandomycin glyc 99.1 8.3E-09 2.8E-13 110.5 24.3 157 402-584 255-420 (424)
47 1ygp_A Yeast glycogen phosphor 99.1 2E-08 7E-13 112.4 24.9 292 229-527 360-761 (879)
48 4amg_A Snogd; transferase, pol 99.0 8.3E-09 2.9E-13 109.2 19.4 153 404-582 239-397 (400)
49 3h4t_A Glycosyltransferase GTF 98.9 8.3E-08 2.8E-12 102.2 21.9 125 403-552 222-351 (404)
50 3q3e_A HMW1C-like glycosyltran 98.9 1.5E-08 5.1E-13 111.7 13.6 177 393-589 431-625 (631)
51 2o6l_A UDP-glucuronosyltransfe 98.8 4.7E-08 1.6E-12 90.8 11.8 122 403-553 22-154 (170)
52 1rrv_A Glycosyltransferase GTF 98.7 5.6E-06 1.9E-10 88.1 27.0 154 403-588 238-400 (416)
53 1iir_A Glycosyltransferase GTF 98.0 2.3E-05 7.8E-10 83.4 11.8 157 403-590 239-401 (415)
54 4gyw_A UDP-N-acetylglucosamine 97.6 0.0022 7.4E-08 73.2 19.6 182 392-590 514-708 (723)
55 3tov_A Glycosyl transferase fa 97.1 0.086 2.9E-06 54.3 23.3 111 390-509 174-288 (349)
56 1psw_A ADP-heptose LPS heptosy 96.0 0.028 9.6E-07 57.6 10.6 113 388-508 167-287 (348)
57 3l7i_A Teichoic acid biosynthe 95.4 0.097 3.3E-06 59.6 12.9 231 315-589 476-719 (729)
58 3hbm_A UDP-sugar hydrolase; PS 95.3 0.094 3.2E-06 52.4 11.0 94 404-509 159-252 (282)
59 3hbf_A Flavonoid 3-O-glucosylt 94.9 0.19 6.5E-06 53.8 12.6 134 404-553 275-414 (454)
60 2c1x_A UDP-glucose flavonoid 3 94.0 0.21 7.1E-06 53.5 10.5 132 403-553 272-412 (456)
61 2pq6_A UDP-glucuronosyl/UDP-gl 93.5 0.72 2.5E-05 49.5 13.7 132 404-553 297-439 (482)
62 2vch_A Hydroquinone glucosyltr 93.3 1 3.6E-05 48.3 14.7 139 403-552 269-428 (480)
63 2acv_A Triterpene UDP-glucosyl 91.3 3.1 0.00011 44.3 15.2 136 403-552 277-424 (463)
64 2gt1_A Lipopolysaccharide hept 89.3 1.3 4.4E-05 44.6 9.6 139 404-553 180-322 (326)
65 2jzc_A UDP-N-acetylglucosamine 78.2 1.6 5.6E-05 41.7 4.1 41 465-510 120-161 (224)
66 1iir_A Glycosyltransferase GTF 76.5 2 6.7E-05 44.8 4.5 37 85-127 1-37 (415)
67 4gi5_A Quinone reductase; prot 74.3 3.4 0.00012 40.9 5.3 42 80-125 18-60 (280)
68 2hy5_A Putative sulfurtransfer 73.7 4.4 0.00015 34.9 5.3 40 85-127 1-41 (130)
69 2d1p_A TUSD, hypothetical UPF0 72.9 4.9 0.00017 35.3 5.4 41 84-127 12-53 (140)
70 2zay_A Response regulator rece 72.0 43 0.0015 28.1 12.2 109 432-553 8-128 (147)
71 3e8x_A Putative NAD-dependent 72.0 3 0.0001 39.5 4.2 39 79-127 16-54 (236)
72 3grc_A Sensor protein, kinase; 68.8 49 0.0017 27.4 11.6 109 432-553 6-127 (140)
73 4b4o_A Epimerase family protei 68.5 3.7 0.00013 40.4 4.1 33 85-127 1-33 (298)
74 1hdo_A Biliverdin IX beta redu 68.0 4.9 0.00017 36.7 4.6 36 82-127 1-36 (206)
75 3jte_A Response regulator rece 65.0 59 0.002 27.0 12.3 108 433-553 4-123 (143)
76 3ew7_A LMO0794 protein; Q8Y8U8 62.6 5.9 0.0002 36.6 4.1 33 85-127 1-33 (221)
77 3h2s_A Putative NADH-flavin re 61.8 6.2 0.00021 36.7 4.1 33 85-127 1-33 (224)
78 2pq6_A UDP-glucuronosyl/UDP-gl 61.3 7.3 0.00025 41.5 5.0 40 82-127 6-45 (482)
79 3ty2_A 5'-nucleotidase SURE; s 61.2 6.3 0.00021 38.4 4.0 40 82-129 9-48 (261)
80 3hzh_A Chemotaxis response reg 60.5 77 0.0026 27.0 11.0 109 432-552 36-156 (157)
81 2qsj_A DNA-binding response re 60.3 77 0.0026 26.7 11.0 111 432-553 3-124 (154)
82 3mc3_A DSRE/DSRF-like family p 59.3 13 0.00043 32.2 5.3 41 84-127 15-55 (134)
83 3heb_A Response regulator rece 58.8 81 0.0028 26.5 11.6 111 432-553 4-135 (152)
84 3kht_A Response regulator; PSI 57.8 81 0.0028 26.2 12.7 111 432-553 5-128 (144)
85 3cg4_A Response regulator rece 57.2 81 0.0028 26.0 13.1 110 431-553 6-127 (142)
86 4f3y_A DHPR, dihydrodipicolina 57.1 13 0.00043 36.6 5.5 44 471-514 67-110 (272)
87 1k68_A Phytochrome response re 56.5 80 0.0027 25.7 12.4 111 432-553 2-131 (140)
88 3to5_A CHEY homolog; alpha(5)b 55.4 97 0.0033 26.4 11.5 111 430-552 10-132 (134)
89 3dqp_A Oxidoreductase YLBE; al 55.4 7.7 0.00026 36.1 3.5 33 85-127 1-33 (219)
90 1jx7_A Hypothetical protein YC 55.3 13 0.00043 30.8 4.6 40 85-127 2-43 (117)
91 3gpi_A NAD-dependent epimerase 55.3 9.4 0.00032 37.1 4.3 35 82-127 1-35 (286)
92 2hy5_B Intracellular sulfur ox 53.4 13 0.00044 32.3 4.3 41 84-127 4-45 (136)
93 2pzm_A Putative nucleotide sug 53.0 9.4 0.00032 38.1 3.9 37 81-127 17-53 (330)
94 2a5l_A Trp repressor binding p 52.8 16 0.00054 33.3 5.2 41 82-127 3-43 (200)
95 2pln_A HP1043, response regula 52.7 81 0.0028 25.9 9.5 106 432-553 18-133 (137)
96 2z1m_A GDP-D-mannose dehydrata 52.6 9.7 0.00033 37.9 4.0 36 82-127 1-36 (345)
97 3of5_A Dethiobiotin synthetase 51.7 17 0.00059 34.4 5.3 40 83-126 2-41 (228)
98 1wcv_1 SOJ, segregation protei 51.7 13 0.00043 35.7 4.5 39 83-127 4-44 (257)
99 2xj4_A MIPZ; replication, cell 51.7 13 0.00045 36.4 4.7 41 83-127 2-42 (286)
100 3n53_A Response regulator rece 51.5 1E+02 0.0034 25.4 10.6 107 433-553 4-122 (140)
101 3f6c_A Positive transcription 51.5 97 0.0033 25.2 10.7 109 433-553 2-120 (134)
102 3i6i_A Putative leucoanthocyan 51.4 11 0.00036 38.0 4.0 36 82-127 8-43 (346)
103 4e7p_A Response regulator; DNA 50.9 1.1E+02 0.0037 25.6 12.1 111 432-553 20-140 (150)
104 1lss_A TRK system potassium up 50.8 15 0.00051 31.0 4.4 34 83-127 3-36 (140)
105 3d7l_A LIN1944 protein; APC893 50.4 12 0.0004 34.2 3.8 34 83-127 2-35 (202)
106 3qvo_A NMRA family protein; st 50.3 9 0.00031 36.2 3.1 25 100-127 32-57 (236)
107 3ghy_A Ketopantoate reductase 50.3 11 0.00037 38.0 3.9 35 82-127 1-35 (335)
108 3h1g_A Chemotaxis protein CHEY 50.1 1E+02 0.0035 25.0 12.3 110 432-553 5-127 (129)
109 4hb9_A Similarities with proba 49.8 9.7 0.00033 38.8 3.5 30 84-124 1-30 (412)
110 3hdg_A Uncharacterized protein 49.8 1.1E+02 0.0036 25.1 11.3 109 432-553 7-125 (137)
111 2vch_A Hydroquinone glucosyltr 49.4 11 0.00038 40.1 3.9 40 83-128 5-45 (480)
112 3fgn_A Dethiobiotin synthetase 49.0 20 0.00069 34.6 5.4 42 81-126 22-63 (251)
113 3hdv_A Response regulator; PSI 48.8 1.1E+02 0.0037 25.0 11.1 109 432-553 7-127 (136)
114 2d1p_B TUSC, hypothetical UPF0 48.5 21 0.0007 30.1 4.8 39 86-127 3-41 (119)
115 2q1w_A Putative nucleotide sug 48.3 14 0.00046 36.9 4.2 39 79-127 16-54 (333)
116 1fjh_A 3alpha-hydroxysteroid d 47.7 16 0.00055 34.7 4.5 34 85-127 1-34 (257)
117 2b69_A UDP-glucuronate decarbo 47.5 14 0.00048 36.9 4.2 38 80-127 23-60 (343)
118 3slg_A PBGP3 protein; structur 47.0 13 0.00043 37.7 3.8 39 79-127 19-58 (372)
119 3gt7_A Sensor protein; structu 46.7 1.3E+02 0.0045 25.3 12.2 109 432-553 7-127 (154)
120 3auf_A Glycinamide ribonucleot 46.5 40 0.0014 32.0 6.9 36 83-127 21-58 (229)
121 2phj_A 5'-nucleotidase SURE; S 46.4 15 0.0005 35.6 3.8 37 85-129 2-38 (251)
122 2x4g_A Nucleoside-diphosphate- 46.3 16 0.00056 36.2 4.5 34 84-127 13-46 (342)
123 4e3z_A Putative oxidoreductase 46.1 16 0.00055 35.2 4.3 38 81-127 22-59 (272)
124 2dkn_A 3-alpha-hydroxysteroid 46.0 17 0.0006 34.2 4.4 34 85-127 1-34 (255)
125 4dad_A Putative pilus assembly 45.3 1.1E+02 0.0037 25.4 9.2 110 432-553 20-141 (146)
126 4huj_A Uncharacterized protein 45.3 14 0.00046 34.8 3.4 35 82-127 21-55 (220)
127 3h5i_A Response regulator/sens 45.2 1.3E+02 0.0044 24.8 14.6 109 432-553 5-124 (140)
128 2hun_A 336AA long hypothetical 45.1 13 0.00045 36.8 3.6 35 82-126 1-37 (336)
129 4id9_A Short-chain dehydrogena 44.8 14 0.00048 36.9 3.7 38 80-127 15-52 (347)
130 2ew2_A 2-dehydropantoate 2-red 44.5 16 0.00056 35.8 4.1 33 84-127 3-35 (316)
131 2rdm_A Response regulator rece 44.5 1.2E+02 0.0042 24.3 12.4 110 432-554 5-124 (132)
132 2j48_A Two-component sensor ki 44.4 81 0.0028 24.6 7.9 105 434-551 3-116 (119)
133 3guy_A Short-chain dehydrogena 44.3 16 0.00053 34.3 3.7 34 85-127 1-34 (230)
134 3t6k_A Response regulator rece 44.2 1.3E+02 0.0045 24.6 12.6 108 433-553 5-124 (136)
135 3ruf_A WBGU; rossmann fold, UD 43.9 15 0.00053 36.6 3.9 36 82-127 23-58 (351)
136 1e6u_A GDP-fucose synthetase; 43.9 12 0.0004 37.0 2.9 35 82-126 1-35 (321)
137 3dhn_A NAD-dependent epimerase 43.3 18 0.00063 33.4 4.1 33 85-127 5-37 (227)
138 1k66_A Phytochrome response re 43.2 1.4E+02 0.0047 24.6 12.0 109 432-553 6-138 (149)
139 3hly_A Flavodoxin-like domain; 43.2 25 0.00085 31.1 4.7 38 85-127 1-38 (161)
140 2e6c_A 5'-nucleotidase SURE; S 43.1 17 0.00059 35.0 3.8 37 85-129 1-37 (244)
141 1qyc_A Phenylcoumaran benzylic 43.0 16 0.00055 35.7 3.7 34 84-127 4-37 (308)
142 3tem_A Ribosyldihydronicotinam 43.0 23 0.00077 33.6 4.6 40 84-127 1-41 (228)
143 3cnb_A DNA-binding response re 42.9 1.4E+02 0.0047 24.4 11.6 111 432-554 8-131 (143)
144 1qyd_A Pinoresinol-lariciresin 42.2 17 0.00057 35.7 3.7 34 84-127 4-37 (313)
145 2ph1_A Nucleotide-binding prot 42.2 21 0.00072 34.3 4.4 37 85-127 18-56 (262)
146 3kb6_A D-lactate dehydrogenase 42.2 52 0.0018 33.1 7.5 44 471-514 188-236 (334)
147 1j9j_A Stationary phase surviV 42.2 18 0.00063 34.8 3.8 37 85-129 1-37 (247)
148 3kjh_A CO dehydrogenase/acetyl 42.0 17 0.00058 34.2 3.7 37 85-127 1-37 (254)
149 1bg6_A N-(1-D-carboxylethyl)-L 41.9 19 0.00066 36.2 4.2 35 82-127 2-36 (359)
150 4g65_A TRK system potassium up 41.9 8.9 0.0003 40.7 1.7 112 405-519 211-345 (461)
151 3ijp_A DHPR, dihydrodipicolina 41.7 20 0.0007 35.4 4.2 43 471-513 82-124 (288)
152 2gk4_A Conserved hypothetical 41.6 23 0.00078 33.8 4.4 25 100-127 28-52 (232)
153 3nhm_A Response regulator; pro 41.5 1.4E+02 0.0047 24.1 11.5 107 433-553 5-122 (133)
154 1i3c_A Response regulator RCP1 41.3 1.5E+02 0.0053 24.6 12.5 111 432-553 8-137 (149)
155 1dbw_A Transcriptional regulat 41.2 1.4E+02 0.0047 23.9 12.0 109 432-553 3-121 (126)
156 1rkx_A CDP-glucose-4,6-dehydra 41.1 18 0.00062 36.2 3.9 36 82-127 7-42 (357)
157 3r6d_A NAD-dependent epimerase 41.1 28 0.00095 32.1 4.9 35 84-127 4-39 (221)
158 3f6r_A Flavodoxin; FMN binding 40.9 30 0.001 29.7 4.8 38 85-127 2-39 (148)
159 1kjn_A MTH0777; hypotethical p 40.8 40 0.0014 29.7 5.3 41 82-126 4-44 (157)
160 3nbm_A PTS system, lactose-spe 40.8 37 0.0013 28.1 5.0 45 83-133 5-49 (108)
161 3ilh_A Two component response 40.7 1.5E+02 0.0051 24.3 12.6 111 432-553 9-139 (146)
162 1id1_A Putative potassium chan 40.7 22 0.00077 30.9 4.0 35 82-127 1-35 (153)
163 1ydg_A Trp repressor binding p 40.7 33 0.0011 31.6 5.4 40 83-127 5-44 (211)
164 3ko8_A NAD-dependent epimerase 40.4 19 0.00066 35.2 3.9 33 85-127 1-33 (312)
165 2bka_A CC3, TAT-interacting pr 40.3 18 0.0006 33.9 3.4 36 82-127 16-53 (242)
166 3vps_A TUNA, NAD-dependent epi 40.1 19 0.00066 35.2 3.8 34 84-127 7-40 (321)
167 4dzz_A Plasmid partitioning pr 40.0 29 0.00099 31.5 4.8 39 85-127 1-39 (206)
168 1l5x_A SurviVal protein E; str 39.5 21 0.0007 35.2 3.8 37 85-129 1-37 (280)
169 3mcu_A Dipicolinate synthase, 39.5 28 0.00094 32.6 4.5 37 83-127 4-42 (207)
170 1dhr_A Dihydropteridine reduct 39.3 26 0.00089 33.0 4.5 35 84-127 6-40 (241)
171 1y1p_A ARII, aldehyde reductas 39.2 25 0.00084 34.8 4.5 36 82-127 9-44 (342)
172 1rpn_A GDP-mannose 4,6-dehydra 39.0 22 0.00076 35.1 4.1 35 83-127 13-47 (335)
173 3eul_A Possible nitrate/nitrit 38.9 1.7E+02 0.0058 24.4 12.1 111 431-553 14-135 (152)
174 1xq6_A Unknown protein; struct 38.7 28 0.00096 32.5 4.6 35 83-127 3-39 (253)
175 1sb8_A WBPP; epimerase, 4-epim 38.7 21 0.00071 35.7 3.9 35 83-127 26-60 (352)
176 1e2b_A Enzyme IIB-cellobiose; 38.6 46 0.0016 27.3 5.3 46 82-133 1-46 (106)
177 2gdz_A NAD+-dependent 15-hydro 38.6 29 0.00099 33.2 4.8 33 86-127 8-40 (267)
178 3l77_A Short-chain alcohol deh 38.4 29 0.00098 32.4 4.6 34 85-127 2-35 (235)
179 3qxc_A Dethiobiotin synthetase 38.4 35 0.0012 32.6 5.2 41 82-126 18-58 (242)
180 3bq9_A Predicted rossmann fold 38.3 3.4E+02 0.011 28.4 12.8 136 402-553 144-332 (460)
181 3gl9_A Response regulator; bet 38.1 1.5E+02 0.0053 23.6 12.2 106 434-552 4-121 (122)
182 3lua_A Response regulator rece 38.0 1.2E+02 0.0042 24.8 8.3 109 432-553 4-127 (140)
183 1cyd_A Carbonyl reductase; sho 37.9 29 0.001 32.5 4.6 36 82-127 5-40 (244)
184 2v4n_A Multifunctional protein 37.6 25 0.00085 34.0 4.0 38 84-129 1-38 (254)
185 2zki_A 199AA long hypothetical 37.6 30 0.001 31.4 4.5 38 84-127 4-41 (199)
186 2qr3_A Two-component system re 37.6 1.4E+02 0.0049 24.2 8.7 108 433-553 4-126 (140)
187 3grc_A Sensor protein, kinase; 37.5 1.7E+02 0.0057 23.9 9.2 33 82-124 4-36 (140)
188 1zmt_A Haloalcohol dehalogenas 37.1 18 0.00062 34.5 3.0 34 85-127 1-34 (254)
189 4hs4_A Chromate reductase; tri 37.0 17 0.00058 33.7 2.6 40 81-124 3-43 (199)
190 1rcu_A Conserved hypothetical 36.9 26 0.00089 32.5 3.8 74 473-550 114-192 (195)
191 3sxp_A ADP-L-glycero-D-mannohe 36.8 27 0.00094 35.0 4.4 36 82-127 8-45 (362)
192 1f4p_A Flavodoxin; electron tr 36.8 32 0.0011 29.5 4.3 38 85-127 1-38 (147)
193 3oh8_A Nucleoside-diphosphate 36.6 27 0.00091 37.4 4.5 34 84-127 147-180 (516)
194 4egb_A DTDP-glucose 4,6-dehydr 36.6 19 0.00065 35.9 3.2 38 79-126 19-56 (346)
195 4e21_A 6-phosphogluconate dehy 36.6 23 0.00078 36.2 3.7 35 82-127 20-54 (358)
196 3c1o_A Eugenol synthase; pheny 36.5 23 0.00077 34.9 3.7 34 84-127 4-37 (321)
197 2ydy_A Methionine adenosyltran 36.5 24 0.00081 34.6 3.8 33 84-126 2-34 (315)
198 2vo1_A CTP synthase 1; pyrimid 36.5 44 0.0015 32.5 5.4 44 81-127 19-62 (295)
199 2ehd_A Oxidoreductase, oxidore 36.1 28 0.00095 32.5 4.1 25 100-127 14-38 (234)
200 3i83_A 2-dehydropantoate 2-red 36.0 26 0.00088 34.9 4.0 33 84-127 2-34 (320)
201 3k96_A Glycerol-3-phosphate de 35.9 26 0.00088 35.7 4.0 34 83-127 28-61 (356)
202 3l4b_C TRKA K+ channel protien 35.8 26 0.00088 32.6 3.7 32 85-127 1-32 (218)
203 1u7z_A Coenzyme A biosynthesis 35.5 41 0.0014 31.9 5.0 25 100-127 33-57 (226)
204 3lqk_A Dipicolinate synthase s 35.5 30 0.001 32.2 4.0 37 83-127 6-44 (201)
205 1hyq_A MIND, cell division inh 35.5 37 0.0013 32.3 4.9 39 85-127 2-40 (263)
206 3m2p_A UDP-N-acetylglucosamine 35.4 29 0.00099 34.0 4.2 34 84-127 2-35 (311)
207 3eod_A Protein HNR; response r 35.4 1.7E+02 0.0059 23.4 11.4 109 432-553 7-126 (130)
208 3pg5_A Uncharacterized protein 35.3 27 0.00093 35.5 4.1 37 85-127 1-39 (361)
209 3hv2_A Response regulator/HD d 35.1 2E+02 0.0067 24.0 11.3 109 432-553 14-133 (153)
210 1ooe_A Dihydropteridine reduct 35.0 27 0.00092 32.7 3.8 25 100-127 12-36 (236)
211 2p5y_A UDP-glucose 4-epimerase 34.8 26 0.00088 34.3 3.8 32 85-126 1-32 (311)
212 3enk_A UDP-glucose 4-epimerase 34.6 34 0.0012 33.8 4.7 34 84-127 5-38 (341)
213 3bfv_A CAPA1, CAPB2, membrane 34.4 43 0.0015 32.4 5.3 41 83-127 80-120 (271)
214 1p9l_A Dihydrodipicolinate red 34.4 1E+02 0.0035 29.4 7.8 78 434-514 2-82 (245)
215 2afh_E Nitrogenase iron protei 34.2 39 0.0013 32.8 5.0 39 84-127 1-39 (289)
216 2gas_A Isoflavone reductase; N 34.0 23 0.0008 34.4 3.3 34 84-127 2-35 (307)
217 1z82_A Glycerol-3-phosphate de 33.4 32 0.0011 34.4 4.3 33 84-127 14-46 (335)
218 3to5_A CHEY homolog; alpha(5)b 33.4 2E+02 0.0067 24.3 8.8 31 83-123 11-41 (134)
219 1ks9_A KPA reductase;, 2-dehyd 33.1 33 0.0011 33.1 4.1 32 85-127 1-32 (291)
220 3k9g_A PF-32 protein; ssgcid, 32.9 24 0.00081 33.9 3.0 38 83-127 25-64 (267)
221 2q62_A ARSH; alpha/beta, flavo 32.8 45 0.0015 32.0 4.9 42 82-127 32-74 (247)
222 3cfy_A Putative LUXO repressor 32.7 2E+02 0.007 23.4 10.5 107 434-553 6-122 (137)
223 2qzj_A Two-component response 32.7 2E+02 0.0069 23.4 10.9 109 432-553 4-121 (136)
224 1udb_A Epimerase, UDP-galactos 32.6 32 0.0011 34.0 4.1 32 85-126 1-32 (338)
225 1wma_A Carbonyl reductase [NAD 32.6 35 0.0012 32.4 4.2 35 84-127 3-38 (276)
226 3cg0_A Response regulator rece 32.5 2E+02 0.0068 23.3 10.9 111 431-553 8-128 (140)
227 3hwr_A 2-dehydropantoate 2-red 32.4 34 0.0011 34.1 4.1 35 81-127 16-50 (318)
228 3hn2_A 2-dehydropantoate 2-red 32.4 27 0.00093 34.6 3.5 33 84-127 2-34 (312)
229 3l6e_A Oxidoreductase, short-c 32.1 40 0.0014 31.6 4.5 34 85-127 3-36 (235)
230 1gy8_A UDP-galactose 4-epimera 32.0 36 0.0012 34.5 4.4 34 84-127 2-36 (397)
231 3i4f_A 3-oxoacyl-[acyl-carrier 31.9 35 0.0012 32.4 4.1 35 84-127 6-40 (264)
232 3sju_A Keto reductase; short-c 31.9 38 0.0013 32.7 4.4 37 82-127 21-57 (279)
233 2c5a_A GDP-mannose-3', 5'-epim 31.7 37 0.0013 34.4 4.5 34 84-127 29-62 (379)
234 2ywr_A Phosphoribosylglycinami 31.7 59 0.002 30.4 5.5 34 85-127 2-37 (216)
235 1jay_A Coenzyme F420H2:NADP+ o 31.5 36 0.0012 31.2 4.0 33 85-127 1-33 (212)
236 3oid_A Enoyl-[acyl-carrier-pro 31.5 37 0.0013 32.4 4.2 35 84-127 3-37 (258)
237 3dtt_A NADP oxidoreductase; st 31.4 35 0.0012 32.4 4.0 36 81-127 16-51 (245)
238 3ego_A Probable 2-dehydropanto 31.3 35 0.0012 33.7 4.1 32 84-127 2-33 (307)
239 1xgk_A Nitrogen metabolite rep 31.3 37 0.0013 34.2 4.3 35 83-127 4-38 (352)
240 2x6t_A ADP-L-glycero-D-manno-h 31.2 31 0.0011 34.5 3.7 36 82-127 44-80 (357)
241 3kcn_A Adenylate cyclase homol 31.2 2.3E+02 0.0077 23.5 13.5 108 432-553 4-123 (151)
242 3ea0_A ATPase, para family; al 31.1 42 0.0015 31.3 4.5 41 83-127 2-43 (245)
243 3dfu_A Uncharacterized protein 31.0 26 0.0009 33.4 2.9 33 83-126 5-37 (232)
244 1o5i_A 3-oxoacyl-(acyl carrier 30.8 45 0.0015 31.6 4.6 25 100-127 28-52 (249)
245 1ys7_A Transcriptional regulat 30.2 3E+02 0.01 24.7 12.5 109 432-553 7-125 (233)
246 3b6i_A Flavoprotein WRBA; flav 30.2 54 0.0019 29.5 4.9 38 85-127 2-40 (198)
247 2r85_A PURP protein PF1517; AT 30.2 36 0.0012 33.5 4.0 32 84-127 2-33 (334)
248 1ek6_A UDP-galactose 4-epimera 30.1 39 0.0013 33.4 4.2 34 84-127 2-35 (348)
249 2vzf_A NADH-dependent FMN redu 30.0 49 0.0017 30.1 4.6 40 85-127 3-43 (197)
250 3sc6_A DTDP-4-dehydrorhamnose 30.0 19 0.00064 34.8 1.7 32 85-126 6-37 (287)
251 1h5q_A NADP-dependent mannitol 29.8 40 0.0014 31.9 4.1 25 100-127 23-47 (265)
252 2ph3_A 3-oxoacyl-[acyl carrier 29.7 35 0.0012 31.9 3.6 33 85-126 1-33 (245)
253 3r0j_A Possible two component 29.7 3.3E+02 0.011 25.0 11.7 109 432-553 23-141 (250)
254 2rjn_A Response regulator rece 29.4 2.4E+02 0.0084 23.4 12.8 110 431-553 6-126 (154)
255 3g17_A Similar to 2-dehydropan 29.4 25 0.00087 34.4 2.6 33 84-127 2-34 (294)
256 1oc2_A DTDP-glucose 4,6-dehydr 29.4 36 0.0012 33.7 3.8 25 100-127 13-39 (348)
257 2pk3_A GDP-6-deoxy-D-LYXO-4-he 29.3 44 0.0015 32.6 4.4 25 100-127 21-45 (321)
258 4ds3_A Phosphoribosylglycinami 29.3 96 0.0033 28.9 6.4 37 82-127 5-43 (209)
259 3osu_A 3-oxoacyl-[acyl-carrier 29.2 46 0.0016 31.4 4.4 34 85-127 4-37 (246)
260 2rh8_A Anthocyanidin reductase 29.2 45 0.0015 32.9 4.5 34 84-127 9-42 (338)
261 2vns_A Metalloreductase steap3 29.2 43 0.0015 31.1 4.0 33 84-127 28-60 (215)
262 2g1u_A Hypothetical protein TM 29.1 59 0.002 28.1 4.8 34 83-127 18-51 (155)
263 1qkk_A DCTD, C4-dicarboxylate 29.1 2.5E+02 0.0085 23.3 12.4 109 432-553 3-121 (155)
264 3end_A Light-independent proto 28.9 58 0.002 31.8 5.2 40 83-127 39-78 (307)
265 2q1s_A Putative nucleotide sug 28.9 39 0.0013 34.2 4.0 35 83-127 31-66 (377)
266 1ja9_A 4HNR, 1,3,6,8-tetrahydr 28.9 37 0.0013 32.3 3.7 24 100-126 30-53 (274)
267 3tfo_A Putative 3-oxoacyl-(acy 28.8 48 0.0016 31.9 4.5 34 85-127 4-37 (264)
268 3doj_A AT3G25530, dehydrogenas 28.7 41 0.0014 33.2 4.0 34 83-127 20-53 (310)
269 3lte_A Response regulator; str 28.6 2.2E+02 0.0077 22.7 10.9 109 432-553 6-125 (132)
270 1w6u_A 2,4-dienoyl-COA reducta 28.3 59 0.002 31.5 5.1 36 82-127 24-59 (302)
271 3rqi_A Response regulator prot 28.3 2.9E+02 0.01 23.9 10.1 109 432-553 7-125 (184)
272 3g0o_A 3-hydroxyisobutyrate de 28.3 39 0.0013 33.2 3.7 32 84-126 7-38 (303)
273 3cio_A ETK, tyrosine-protein k 28.2 64 0.0022 31.7 5.3 41 83-127 102-142 (299)
274 2a35_A Hypothetical protein PA 28.2 36 0.0012 30.9 3.3 34 84-127 5-40 (215)
275 1jkx_A GART;, phosphoribosylgl 28.1 1.5E+02 0.0052 27.5 7.7 34 85-127 1-36 (212)
276 3q0i_A Methionyl-tRNA formyltr 28.1 49 0.0017 33.1 4.4 35 82-127 5-39 (318)
277 3m6m_D Sensory/regulatory prot 28.0 2.5E+02 0.0086 23.1 11.9 109 432-553 14-136 (143)
278 1vl8_A Gluconate 5-dehydrogena 27.7 53 0.0018 31.4 4.6 33 86-127 22-54 (267)
279 3ic5_A Putative saccharopine d 27.6 52 0.0018 26.4 3.9 33 84-127 5-38 (118)
280 1bvy_F Protein (cytochrome P45 27.5 49 0.0017 30.3 4.0 39 84-127 21-59 (191)
281 2vvp_A Ribose-5-phosphate isom 27.4 51 0.0018 29.5 3.9 37 82-126 1-37 (162)
282 3e48_A Putative nucleoside-dip 27.3 40 0.0014 32.4 3.6 33 85-127 1-34 (289)
283 2ixd_A LMBE-related protein; h 27.2 75 0.0026 30.3 5.4 42 82-129 1-42 (242)
284 3tqr_A Phosphoribosylglycinami 27.1 1.4E+02 0.0047 27.9 7.2 36 83-127 4-40 (215)
285 1cp2_A CP2, nitrogenase iron p 27.1 57 0.002 31.0 4.7 38 85-127 1-38 (269)
286 3rd5_A Mypaa.01249.C; ssgcid, 27.0 66 0.0023 31.1 5.2 25 100-127 25-49 (291)
287 3m1a_A Putative dehydrogenase; 26.9 48 0.0016 31.9 4.1 34 85-127 5-38 (281)
288 3vnd_A TSA, tryptophan synthas 26.9 4.3E+02 0.015 25.3 11.9 118 403-526 96-235 (267)
289 2bi7_A UDP-galactopyranose mut 26.8 40 0.0014 34.5 3.6 35 82-127 1-35 (384)
290 3av3_A Phosphoribosylglycinami 26.7 1.3E+02 0.0045 27.9 7.0 34 85-127 4-39 (212)
291 3rft_A Uronate dehydrogenase; 26.7 29 0.001 33.2 2.4 34 85-127 3-36 (267)
292 3rp8_A Flavoprotein monooxygen 26.7 40 0.0014 34.4 3.6 34 82-126 21-54 (407)
293 1orr_A CDP-tyvelose-2-epimeras 26.6 52 0.0018 32.4 4.4 24 100-126 10-33 (347)
294 1kyq_A Met8P, siroheme biosynt 26.5 41 0.0014 32.9 3.4 36 82-128 11-46 (274)
295 3tri_A Pyrroline-5-carboxylate 26.3 40 0.0014 32.8 3.4 35 82-127 1-38 (280)
296 1ybx_A Conserved hypothetical 26.3 1.5E+02 0.0053 25.7 6.7 51 501-553 66-116 (143)
297 1ka9_F Imidazole glycerol phos 26.2 3.9E+02 0.013 24.7 10.6 68 476-547 164-242 (252)
298 1evy_A Glycerol-3-phosphate de 26.1 32 0.0011 34.8 2.7 32 85-127 15-47 (366)
299 2rhc_B Actinorhodin polyketide 26.1 68 0.0023 30.8 5.1 33 86-127 23-55 (277)
300 3eag_A UDP-N-acetylmuramate:L- 26.1 56 0.0019 32.5 4.5 32 84-125 4-35 (326)
301 2acv_A Triterpene UDP-glucosyl 26.1 38 0.0013 35.7 3.4 39 84-128 9-49 (463)
302 3afn_B Carbonyl reductase; alp 26.0 43 0.0015 31.5 3.5 25 100-127 16-40 (258)
303 1uls_A Putative 3-oxoacyl-acyl 26.0 61 0.0021 30.5 4.6 25 100-127 14-38 (245)
304 3cu5_A Two component transcrip 25.9 2.7E+02 0.0093 22.7 11.7 108 434-553 4-123 (141)
305 2iz6_A Molybdenum cofactor car 25.9 1.8E+02 0.0061 26.2 7.5 136 404-553 14-174 (176)
306 3kkl_A Probable chaperone prot 25.9 69 0.0023 30.6 4.9 46 82-127 1-51 (244)
307 3gg2_A Sugar dehydrogenase, UD 25.8 44 0.0015 35.2 3.8 32 85-127 3-34 (450)
308 2p4h_X Vestitone reductase; NA 25.8 50 0.0017 32.2 4.1 24 100-126 10-33 (322)
309 3q9l_A Septum site-determining 25.8 69 0.0024 30.1 5.0 39 85-127 2-40 (260)
310 1fmc_A 7 alpha-hydroxysteroid 25.8 41 0.0014 31.6 3.3 25 100-127 20-44 (255)
311 1hdc_A 3-alpha, 20 beta-hydrox 25.7 60 0.002 30.7 4.5 25 100-127 14-38 (254)
312 3f2v_A General stress protein 25.7 36 0.0012 31.3 2.7 37 85-126 2-38 (192)
313 2jba_A Phosphate regulon trans 25.7 2.5E+02 0.0084 22.2 8.5 107 434-553 4-122 (127)
314 2bgk_A Rhizome secoisolaricire 25.7 64 0.0022 30.7 4.7 24 100-126 25-48 (278)
315 3rkr_A Short chain oxidoreduct 25.6 49 0.0017 31.5 3.9 33 86-127 30-62 (262)
316 2nwq_A Probable short-chain de 25.6 45 0.0015 32.2 3.6 33 86-127 22-54 (272)
317 2fzv_A Putative arsenical resi 25.5 72 0.0025 31.2 5.0 42 82-127 56-98 (279)
318 1sqs_A Conserved hypothetical 25.5 61 0.0021 30.6 4.5 40 85-127 2-42 (242)
319 1mb3_A Cell division response 25.5 2.4E+02 0.0084 22.1 12.0 107 434-553 3-121 (124)
320 2d1y_A Hypothetical protein TT 25.4 63 0.0021 30.6 4.6 25 100-127 15-39 (256)
321 2wsb_A Galactitol dehydrogenas 25.4 61 0.0021 30.4 4.5 25 100-127 20-44 (254)
322 3uuw_A Putative oxidoreductase 25.3 1.5E+02 0.005 28.9 7.5 91 404-508 7-97 (308)
323 2izz_A Pyrroline-5-carboxylate 25.3 36 0.0012 33.8 2.9 35 82-127 20-58 (322)
324 1uzm_A 3-oxoacyl-[acyl-carrier 25.3 59 0.002 30.6 4.4 25 100-127 24-48 (247)
325 2cfc_A 2-(R)-hydroxypropyl-COM 25.3 64 0.0022 30.1 4.6 25 100-127 11-35 (250)
326 3qvl_A Putative hydantoin race 25.3 2.7E+02 0.0092 26.3 9.0 39 84-127 1-39 (245)
327 2k6g_A Replication factor C su 25.2 1.4E+02 0.0047 24.6 6.0 38 404-442 36-80 (109)
328 3kyj_B CHEY6 protein, putative 25.2 2.7E+02 0.0092 22.8 8.4 92 432-525 13-117 (145)
329 3nav_A Tryptophan synthase alp 25.2 4.6E+02 0.016 25.2 11.1 118 403-526 98-237 (271)
330 3rpe_A MDAB, modulator of drug 25.2 75 0.0026 29.8 4.9 42 84-127 25-69 (218)
331 2a4k_A 3-oxoacyl-[acyl carrier 25.1 66 0.0023 30.7 4.7 25 100-127 15-39 (263)
332 3b2n_A Uncharacterized protein 25.1 2.7E+02 0.0092 22.4 12.4 109 433-553 4-123 (133)
333 1g3q_A MIND ATPase, cell divis 25.1 77 0.0026 29.3 5.1 39 85-127 2-40 (237)
334 2hqr_A Putative transcriptiona 25.0 3E+02 0.01 24.7 9.2 104 434-553 2-115 (223)
335 3awd_A GOX2181, putative polyo 25.0 62 0.0021 30.4 4.5 25 100-127 22-46 (260)
336 3fkq_A NTRC-like two-domain pr 24.9 61 0.0021 32.9 4.6 41 83-127 141-181 (373)
337 1nff_A Putative oxidoreductase 24.9 62 0.0021 30.8 4.5 25 100-127 16-40 (260)
338 3gem_A Short chain dehydrogena 24.8 42 0.0014 32.1 3.2 33 86-127 28-60 (260)
339 1t0i_A YLR011WP; FMN binding p 24.8 84 0.0029 28.2 5.1 40 85-127 1-46 (191)
340 2gwr_A DNA-binding response re 24.8 3.9E+02 0.013 24.2 11.3 107 433-552 6-121 (238)
341 2fwm_X 2,3-dihydro-2,3-dihydro 24.8 66 0.0023 30.3 4.6 25 100-127 16-40 (250)
342 3gk3_A Acetoacetyl-COA reducta 24.8 53 0.0018 31.4 3.9 35 84-127 24-58 (269)
343 2c20_A UDP-glucose 4-epimerase 24.7 60 0.0021 31.8 4.4 33 85-127 2-34 (330)
344 1t5b_A Acyl carrier protein ph 24.6 74 0.0025 28.6 4.8 41 85-127 2-44 (201)
345 3qsg_A NAD-binding phosphogluc 24.6 38 0.0013 33.6 2.9 34 82-126 22-56 (312)
346 3op4_A 3-oxoacyl-[acyl-carrier 24.6 61 0.0021 30.6 4.3 33 86-127 10-42 (248)
347 1t2a_A GDP-mannose 4,6 dehydra 24.6 60 0.0021 32.6 4.5 25 100-127 33-57 (375)
348 2rcy_A Pyrroline carboxylate r 24.5 34 0.0012 32.6 2.5 35 82-127 2-40 (262)
349 1x0v_A GPD-C, GPDH-C, glycerol 24.5 33 0.0011 34.4 2.5 35 82-127 6-47 (354)
350 3orf_A Dihydropteridine reduct 24.5 65 0.0022 30.4 4.5 33 86-127 23-55 (251)
351 1p2f_A Response regulator; DRR 24.4 2.9E+02 0.01 24.6 9.1 106 434-553 4-117 (220)
352 2o23_A HADH2 protein; HSD17B10 24.4 66 0.0023 30.3 4.6 25 100-127 21-45 (265)
353 1yxm_A Pecra, peroxisomal tran 24.4 80 0.0027 30.6 5.3 25 100-127 27-51 (303)
354 3ak4_A NADH-dependent quinucli 24.3 65 0.0022 30.5 4.5 25 100-127 21-45 (263)
355 3zq6_A Putative arsenical pump 24.3 84 0.0029 31.2 5.4 40 84-127 12-51 (324)
356 4gbj_A 6-phosphogluconate dehy 24.3 32 0.0011 34.0 2.2 30 85-125 6-35 (297)
357 2pi1_A D-lactate dehydrogenase 24.3 2.3E+02 0.0078 28.3 8.7 44 471-514 188-236 (334)
358 4e38_A Keto-hydroxyglutarate-a 24.2 3.1E+02 0.011 25.8 9.1 85 419-506 46-132 (232)
359 2pd6_A Estradiol 17-beta-dehyd 24.2 66 0.0022 30.3 4.5 25 100-127 16-40 (264)
360 1d4a_A DT-diaphorase, quinone 24.2 84 0.0029 30.4 5.3 40 84-127 2-42 (273)
361 4dll_A 2-hydroxy-3-oxopropiona 24.1 61 0.0021 32.1 4.3 34 83-127 30-63 (320)
362 1p9o_A Phosphopantothenoylcyst 24.1 64 0.0022 32.1 4.4 20 108-127 69-88 (313)
363 1db3_A GDP-mannose 4,6-dehydra 24.1 58 0.002 32.5 4.3 25 100-127 10-34 (372)
364 2hq1_A Glucose/ribitol dehydro 24.0 50 0.0017 30.8 3.5 25 100-127 14-38 (247)
365 3kto_A Response regulator rece 24.0 2.1E+02 0.0072 23.2 7.3 108 433-553 7-126 (136)
366 1n7h_A GDP-D-mannose-4,6-dehyd 23.9 62 0.0021 32.6 4.4 25 100-127 37-61 (381)
367 2ae2_A Protein (tropinone redu 23.9 69 0.0024 30.3 4.6 25 100-127 18-42 (260)
368 1vl0_A DTDP-4-dehydrorhamnose 23.9 39 0.0013 32.6 2.8 33 84-126 12-44 (292)
369 3gd5_A Otcase, ornithine carba 23.9 4.4E+02 0.015 26.1 10.5 84 390-486 147-234 (323)
370 2qyt_A 2-dehydropantoate 2-red 23.8 43 0.0015 32.8 3.1 32 84-126 8-45 (317)
371 2hrz_A AGR_C_4963P, nucleoside 23.7 43 0.0015 33.1 3.2 36 82-127 12-54 (342)
372 2qxy_A Response regulator; reg 23.6 2.9E+02 0.01 22.3 10.3 108 432-553 4-121 (142)
373 1spx_A Short-chain reductase f 23.6 63 0.0021 30.9 4.2 33 86-127 7-39 (278)
374 2dtx_A Glucose 1-dehydrogenase 23.6 66 0.0023 30.7 4.4 25 100-127 17-41 (264)
375 1txg_A Glycerol-3-phosphate de 23.5 47 0.0016 32.8 3.4 31 85-126 1-31 (335)
376 1yb1_A 17-beta-hydroxysteroid 23.5 73 0.0025 30.4 4.7 25 100-127 40-64 (272)
377 1vhc_A Putative KHG/KDPG aldol 23.5 3.6E+02 0.012 25.1 9.4 85 419-506 29-115 (224)
378 2raf_A Putative dinucleotide-b 23.4 52 0.0018 30.3 3.5 33 84-127 19-51 (209)
379 1iy8_A Levodione reductase; ox 23.4 71 0.0024 30.4 4.5 25 100-127 22-46 (267)
380 4gwg_A 6-phosphogluconate dehy 23.3 48 0.0016 35.3 3.5 35 82-127 2-36 (484)
381 1sby_A Alcohol dehydrogenase; 23.3 67 0.0023 30.2 4.3 24 100-126 14-38 (254)
382 1xu9_A Corticosteroid 11-beta- 23.2 72 0.0025 30.7 4.6 25 100-127 37-61 (286)
383 4e38_A Keto-hydroxyglutarate-a 23.2 1.7E+02 0.0057 27.7 7.0 113 432-552 106-228 (232)
384 3la6_A Tyrosine-protein kinase 23.2 85 0.0029 30.6 5.1 41 83-127 90-130 (286)
385 2b4a_A BH3024; flavodoxin-like 23.2 3E+02 0.01 22.2 11.2 110 431-553 14-131 (138)
386 2zyd_A 6-phosphogluconate dehy 23.1 44 0.0015 35.5 3.2 36 81-127 12-47 (480)
387 1zk4_A R-specific alcohol dehy 23.1 53 0.0018 30.7 3.5 25 100-127 15-39 (251)
388 3q9s_A DNA-binding response re 23.1 3.3E+02 0.011 25.3 9.3 107 433-552 38-153 (249)
389 3r6w_A FMN-dependent NADH-azor 23.1 71 0.0024 29.4 4.3 40 85-127 2-44 (212)
390 2bll_A Protein YFBG; decarboxy 23.0 60 0.002 31.9 4.0 33 85-127 1-34 (345)
391 3o26_A Salutaridine reductase; 23.0 61 0.0021 31.3 4.1 34 85-127 12-45 (311)
392 3pef_A 6-phosphogluconate dehy 23.0 56 0.0019 31.7 3.7 32 85-127 2-33 (287)
393 1zh2_A KDP operon transcriptio 23.0 2.7E+02 0.0092 21.6 10.0 107 434-553 3-118 (121)
394 3d3w_A L-xylulose reductase; u 22.9 76 0.0026 29.5 4.6 25 100-127 16-40 (244)
395 2cok_A Poly [ADP-ribose] polym 22.8 31 0.001 28.9 1.5 67 431-508 12-78 (113)
396 2r6j_A Eugenol synthase 1; phe 22.7 58 0.002 31.8 3.8 32 86-127 13-44 (318)
397 1kgs_A DRRD, DNA binding respo 22.7 4.1E+02 0.014 23.6 11.7 108 433-553 3-120 (225)
398 1g0o_A Trihydroxynaphthalene r 22.7 1E+02 0.0034 29.6 5.6 33 86-127 30-62 (283)
399 3h7a_A Short chain dehydrogena 22.7 80 0.0027 29.8 4.7 34 85-127 7-40 (252)
400 1yo6_A Putative carbonyl reduc 22.7 57 0.0019 30.3 3.6 25 100-127 12-38 (250)
401 3qiv_A Short-chain dehydrogena 22.7 77 0.0026 29.7 4.6 34 85-127 9-42 (253)
402 2ark_A Flavodoxin; FMN, struct 22.6 87 0.003 28.1 4.8 39 84-127 4-43 (188)
403 1xkq_A Short-chain reductase f 22.6 67 0.0023 30.9 4.2 33 86-127 7-39 (280)
404 3k31_A Enoyl-(acyl-carrier-pro 22.6 88 0.003 30.4 5.1 33 86-127 31-65 (296)
405 2wm3_A NMRA-like family domain 22.6 60 0.0021 31.3 3.9 34 84-127 5-39 (299)
406 1zmo_A Halohydrin dehalogenase 22.5 47 0.0016 31.2 3.0 30 86-124 2-31 (244)
407 1jbe_A Chemotaxis protein CHEY 22.5 2.9E+02 0.0099 21.8 12.0 110 432-553 4-125 (128)
408 3o38_A Short chain dehydrogena 22.4 87 0.003 29.6 5.0 23 102-127 34-56 (266)
409 3p19_A BFPVVD8, putative blue 22.4 74 0.0025 30.4 4.5 33 86-127 17-49 (266)
410 2jah_A Clavulanic acid dehydro 22.4 78 0.0027 29.8 4.6 25 100-127 16-40 (247)
411 1sny_A Sniffer CG10964-PA; alp 22.4 61 0.0021 30.7 3.8 35 84-127 20-57 (267)
412 2pd4_A Enoyl-[acyl-carrier-pro 22.4 78 0.0027 30.3 4.7 24 101-127 18-41 (275)
413 3v2h_A D-beta-hydroxybutyrate 22.3 77 0.0027 30.5 4.6 33 85-126 25-57 (281)
414 2pl1_A Transcriptional regulat 22.3 2.8E+02 0.0095 21.6 11.7 107 434-553 2-118 (121)
415 2ag5_A DHRS6, dehydrogenase/re 22.3 64 0.0022 30.3 3.9 25 100-127 15-39 (246)
416 2ew8_A (S)-1-phenylethanol deh 22.3 76 0.0026 29.8 4.5 25 100-127 16-40 (249)
417 2ekp_A 2-deoxy-D-gluconate 3-d 22.2 78 0.0027 29.5 4.5 25 100-127 11-35 (239)
418 1n2s_A DTDP-4-, DTDP-glucose o 22.2 45 0.0016 32.1 2.9 32 85-127 1-32 (299)
419 1xq1_A Putative tropinone redu 22.2 56 0.0019 31.0 3.5 25 100-127 23-47 (266)
420 2nm0_A Probable 3-oxacyl-(acyl 22.2 97 0.0033 29.3 5.2 33 86-127 22-54 (253)
421 3un1_A Probable oxidoreductase 22.2 69 0.0024 30.5 4.2 34 85-127 28-61 (260)
422 3icc_A Putative 3-oxoacyl-(acy 22.1 75 0.0026 29.8 4.4 34 85-127 7-40 (255)
423 1zgz_A Torcad operon transcrip 22.1 2.8E+02 0.0097 21.6 12.4 108 433-553 3-119 (122)
424 2pju_A Propionate catabolism o 22.0 3.5E+02 0.012 25.3 8.9 103 418-553 92-194 (225)
425 2gn4_A FLAA1 protein, UDP-GLCN 22.0 62 0.0021 32.3 3.9 36 82-127 19-56 (344)
426 1srr_A SPO0F, sporulation resp 22.0 2.9E+02 0.01 21.7 10.2 107 433-552 4-120 (124)
427 3ai3_A NADPH-sorbose reductase 21.9 79 0.0027 29.9 4.6 25 100-127 16-40 (263)
428 3dii_A Short-chain dehydrogena 21.9 79 0.0027 29.7 4.5 33 86-127 3-35 (247)
429 2c07_A 3-oxoacyl-(acyl-carrier 21.8 72 0.0025 30.7 4.3 23 100-125 53-75 (285)
430 2pnf_A 3-oxoacyl-[acyl-carrier 21.7 58 0.002 30.3 3.5 25 100-127 16-40 (248)
431 3pp8_A Glyoxylate/hydroxypyruv 21.6 1.4E+02 0.0047 29.7 6.3 46 469-514 185-235 (315)
432 3f6p_A Transcriptional regulat 21.6 3E+02 0.01 21.7 11.1 107 433-552 3-118 (120)
433 2i87_A D-alanine-D-alanine lig 21.5 36 0.0012 34.5 2.0 43 82-127 1-44 (364)
434 1xdw_A NAD+-dependent (R)-2-hy 21.5 1.1E+02 0.0039 30.4 5.8 44 471-514 192-240 (331)
435 3lcm_A SMU.1420, putative oxid 21.5 72 0.0025 29.1 4.0 38 85-127 1-39 (196)
436 1xg5_A ARPG836; short chain de 21.4 85 0.0029 30.0 4.7 25 100-127 41-65 (279)
437 3oet_A Erythronate-4-phosphate 21.4 2.9E+02 0.0098 28.2 8.8 81 432-514 119-216 (381)
438 3iqw_A Tail-anchored protein t 21.4 73 0.0025 32.0 4.2 41 82-127 13-53 (334)
439 1meo_A Phosophoribosylglycinam 21.3 1.7E+02 0.0058 27.1 6.5 36 85-129 1-38 (209)
440 2vou_A 2,6-dihydroxypyridine h 21.3 63 0.0022 32.8 3.9 34 82-126 3-36 (397)
441 3cz5_A Two-component response 21.3 3.5E+02 0.012 22.3 10.8 110 432-553 5-125 (153)
442 1rtt_A Conserved hypothetical 21.2 37 0.0013 30.8 1.9 39 83-126 5-44 (193)
443 2iz1_A 6-phosphogluconate dehy 21.2 57 0.002 34.5 3.6 34 82-126 3-36 (474)
444 2x9g_A PTR1, pteridine reducta 21.1 46 0.0016 32.2 2.7 33 86-127 24-56 (288)
445 4ekn_B Aspartate carbamoyltran 21.1 2.1E+02 0.0072 28.3 7.4 112 354-491 121-233 (306)
446 3fwy_A Light-independent proto 21.1 70 0.0024 31.8 4.0 37 84-127 47-85 (314)
447 3kkj_A Amine oxidase, flavin-c 21.1 58 0.002 29.8 3.3 29 85-124 3-31 (336)
448 2y0c_A BCEC, UDP-glucose dehyd 21.0 71 0.0024 33.8 4.3 32 84-126 8-39 (478)
449 2z1n_A Dehydrogenase; reductas 21.0 87 0.003 29.6 4.6 33 86-127 8-40 (260)
450 1yb4_A Tartronic semialdehyde 21.0 48 0.0017 32.1 2.8 31 84-125 3-33 (295)
451 2xdo_A TETX2 protein; tetracyc 21.0 63 0.0021 32.9 3.8 35 82-127 24-58 (398)
452 3cky_A 2-hydroxymethyl glutara 21.0 70 0.0024 31.0 4.0 33 83-126 3-35 (301)
453 1uay_A Type II 3-hydroxyacyl-C 20.9 69 0.0023 29.6 3.8 25 100-127 11-35 (242)
454 2dpo_A L-gulonate 3-dehydrogen 20.9 60 0.0021 32.4 3.5 35 82-127 4-38 (319)
455 3mm4_A Histidine kinase homolo 20.9 4.4E+02 0.015 23.4 10.7 108 432-553 61-196 (206)
456 1xv5_A AGT, DNA alpha-glucosyl 20.9 5E+02 0.017 24.0 27.6 151 405-566 199-378 (401)
457 2r25_B Osmosensing histidine p 20.9 3.3E+02 0.011 21.9 11.2 109 433-553 3-127 (133)
458 4f6c_A AUSA reductase domain p 20.8 59 0.002 33.5 3.6 37 82-128 67-103 (427)
459 1kew_A RMLB;, DTDP-D-glucose 4 20.8 59 0.002 32.3 3.5 33 85-127 1-34 (361)
460 3da8_A Probable 5'-phosphoribo 20.8 1.9E+02 0.0063 27.0 6.7 38 82-128 10-48 (215)
461 1zq6_A Otcase, ornithine carba 20.7 4.5E+02 0.015 26.5 9.9 89 390-486 178-274 (359)
462 4em8_A Ribose 5-phosphate isom 20.7 1.2E+02 0.0041 26.6 4.9 38 82-127 5-42 (148)
463 3tpc_A Short chain alcohol deh 20.7 91 0.0031 29.4 4.7 33 86-127 8-40 (257)
464 3l6d_A Putative oxidoreductase 20.7 63 0.0022 31.8 3.6 33 83-126 8-40 (306)
465 3alj_A 2-methyl-3-hydroxypyrid 20.7 62 0.0021 32.6 3.6 34 82-126 9-42 (379)
466 2yq5_A D-isomer specific 2-hyd 20.7 2.6E+02 0.0089 28.0 8.3 79 434-514 150-242 (343)
467 1dxy_A D-2-hydroxyisocaproate 20.6 2.2E+02 0.0074 28.4 7.7 44 471-514 191-239 (333)
468 2uvd_A 3-oxoacyl-(acyl-carrier 20.6 83 0.0029 29.4 4.3 24 100-126 13-36 (246)
469 1wbh_A KHG/KDPG aldolase; lyas 20.6 4.2E+02 0.014 24.4 9.2 95 404-505 17-113 (214)
470 1zem_A Xylitol dehydrogenase; 20.6 86 0.0029 29.7 4.5 25 100-127 16-40 (262)
471 1gee_A Glucose 1-dehydrogenase 20.5 60 0.002 30.6 3.3 24 100-126 16-39 (261)
472 3ius_A Uncharacterized conserv 20.5 64 0.0022 30.8 3.6 33 84-127 5-37 (286)
473 1byi_A Dethiobiotin synthase; 20.5 1.1E+02 0.0036 28.0 5.0 24 101-124 13-36 (224)
474 1j4a_A D-LDH, D-lactate dehydr 20.4 2.3E+02 0.0077 28.2 7.7 44 471-514 193-241 (333)
475 1i36_A Conserved hypothetical 20.4 62 0.0021 30.8 3.4 29 85-124 1-29 (264)
476 1xjc_A MOBB protein homolog; s 20.4 1.1E+02 0.0039 27.2 4.9 39 84-127 3-41 (169)
477 3fni_A Putative diflavin flavo 20.3 1.3E+02 0.0046 26.2 5.4 39 84-127 4-42 (159)
478 1yio_A Response regulatory pro 20.3 4.4E+02 0.015 23.1 11.5 108 433-553 5-122 (208)
479 3tqq_A Methionyl-tRNA formyltr 20.2 1.1E+02 0.0036 30.5 5.1 33 84-127 2-34 (314)
480 2oqr_A Sensory transduction pr 20.2 3.8E+02 0.013 24.0 8.9 108 433-553 5-121 (230)
481 1duv_G Octase-1, ornithine tra 20.2 4.4E+02 0.015 26.3 9.7 86 390-486 143-233 (333)
482 3f1l_A Uncharacterized oxidore 20.2 88 0.003 29.5 4.4 33 86-127 13-45 (252)
483 2zat_A Dehydrogenase/reductase 20.2 76 0.0026 30.0 4.0 25 100-127 23-47 (260)
484 1geg_A Acetoin reductase; SDR 20.1 90 0.0031 29.4 4.5 33 86-127 3-35 (256)
485 2h78_A Hibadh, 3-hydroxyisobut 20.1 77 0.0026 30.9 4.1 33 84-127 3-35 (302)
486 3ihm_A Styrene monooxygenase A 20.1 59 0.002 33.7 3.4 32 85-127 23-54 (430)
487 4ep1_A Otcase, ornithine carba 20.1 5.6E+02 0.019 25.6 10.4 84 390-486 169-256 (340)
488 2pv7_A T-protein [includes: ch 20.1 63 0.0022 31.6 3.4 32 85-126 22-53 (298)
489 2i6u_A Otcase, ornithine carba 20.1 4.6E+02 0.016 25.8 9.7 85 390-486 138-226 (307)
490 2hna_A Protein MIOC, flavodoxi 20.0 83 0.0029 26.9 3.9 36 85-125 2-37 (147)
491 2bw0_A 10-FTHFDH, 10-formyltet 20.0 1.1E+02 0.0036 30.8 5.1 35 82-127 20-54 (329)
492 2qv0_A Protein MRKE; structura 20.0 3.5E+02 0.012 21.8 12.3 111 431-553 8-127 (143)
493 3dff_A Teicoplanin pseudoaglyc 20.0 1.1E+02 0.0037 29.6 5.1 40 84-129 7-46 (273)
No 1
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=100.00 E-value=9.1e-83 Score=708.32 Aligned_cols=529 Identities=71% Similarity=1.195 Sum_probs=458.9
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
..||||||++|++|+.|+||+++++++|+++|+++||+|+||+|.|+++++.++......+.++++...+++++...+|+
T Consensus 8 ~~MkIl~vs~E~~P~~K~GGLadvv~~L~~aL~~~G~~V~Vi~P~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 87 (536)
T 3vue_A 8 HHMNVVFVGAEMAPWSKTGGLGDVLGGLPPAMAANGHRVMVISPRYDQYKDAWDTSVVAEIKVADRYERVRFFHCYKRGV 87 (536)
T ss_dssp CCCEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCSCCTTCEEEEEEEEEEETTEEEEEEEEECEETTE
T ss_pred CCcEEEEEEEeccchhccCcHHHHHHHHHHHHHHcCCeEEEEecCchhhhhhcccceEEEEEecCceEEEEEEEEEECCc
Confidence 47999999999999999999999999999999999999999999999999888888888899999999999999999999
Q ss_pred eEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccch
Q 007224 163 DRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSL 242 (612)
Q Consensus 163 ~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~ 242 (612)
+++++++|.|+.+ .|+.++..+|++..|.+|.|+..||.+||++++++++.++....+++.+.+++|+|+|+|||++++
T Consensus 88 ~~y~id~~~~~~r-~~~~~~~~~Y~~~~~~~~~d~~~rf~~f~~a~l~~~~~l~~~~~~~~~~~~~~ddIiH~hDW~t~l 166 (536)
T 3vue_A 88 DRVFIDHPSFLEK-VWGKTGEKIYGPDTGVDYKDNQMRFSLLCQAALEAPRILNLNNNPYFKGTYGEDVVFVCNDWHTGP 166 (536)
T ss_dssp EEEEEECTTTTCC-------------------CHHHHHHHHHHHHHHHHHHHCCCCCCTTCCSCCCSCEEEEEESGGGST
T ss_pred eEEEecChhhhcc-ccccCCCcccCCCccCccchHHHHHHHHHHHHHHHHHHhccccchhhhccCCCCEEEEECcchHHH
Confidence 9999999999999 888888999999999999999999999999999999999888888888888888899999999999
Q ss_pred HHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEE
Q 007224 243 IPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVL 322 (612)
Q Consensus 243 ~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi 322 (612)
+|.+++..++..+.+.++|+|+|+||+.+||.|+...+..++++.......++...+..+.....+++++.++..||+|+
T Consensus 167 ~~~~l~~~~~~~~~~~~~~~V~TiHnl~~qg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~k~~i~~ad~v~ 246 (536)
T 3vue_A 167 LASYLKNNYQPNGIYRNAKVAFCIHNISYQGRFAFEDYPELNLSERFRSSFDFIDGYDTPVEGRKINWMKAGILEADRVL 246 (536)
T ss_dssp HHHHHHHHTTTTTSSTTCEEEEEESCTTCCCEEEGGGGGGGCCCGGGHHHHEEEETTTSTTCEEEEEHHHHHHHHCSEEE
T ss_pred HHHHHHHhhhhhhhhcccceeeeecCcccccccchhhhhhcCCchhhcchhhhhhcccccccccchhHHHHHHHhccEEE
Confidence 99999999988888899999999999999999999999888988887766666666776667778999999999999999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~ 402 (612)
|||+.+++++.....+|..++...+..++.+|+||+|.+.|+|.+++++..+|+..+....|..+|..+++++|++.+++
T Consensus 247 tVS~~~a~ei~~~~~~g~~l~~~~~~~~i~~I~NGiD~~~~~p~~d~~~~~~~~~~~~~~~K~~~k~~l~~~~gl~~d~~ 326 (536)
T 3vue_A 247 TVSPYYAEELISGIARGCELDNIMRLTGITGIVNGMDVSEWDPSKDKYITAKYDATTAIEAKALNKEALQAEAGLPVDRK 326 (536)
T ss_dssp ESCHHHHHHHHTTCCCCSSSCCCSCCCSCEECCCCCCTTTSCTTTCSSSSCCCCTTTHHHHHHHHHHHHHHHTTSCCCTT
T ss_pred EcCHHHhhhhhcccccccccccccccCCeEEEECCcchhhcCCCCccccccccchhhhhhhhHHHHHHHHHhcCCCCCCC
Confidence 99999999998766677777766777899999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
.|+|+|+||++++||++.|++|++++.+++.+|+|+|.|+...+..++.+...++.++...+.++.++.+.+|+.||++|
T Consensus 327 ~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~~v 406 (536)
T 3vue_A 327 IPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADVLA 406 (536)
T ss_dssp SCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSEEE
T ss_pred CcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhheee
Confidence 99999999999999999999999999888999999999998888899999999998899999999999999999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHH
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEM 562 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~ 562 (612)
+||++|+||++++|||+||+|||+|++||+.|+|.++.|||+++....++.+|++.|+++|+++|.++++.++.+.++++
T Consensus 407 ~PS~~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~~~~~~~~~~~ 486 (536)
T 3vue_A 407 VPSRFEPCGLIQLQGMRYGTPCACASTGGLVDTVIEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIKVVGTPAYEEM 486 (536)
T ss_dssp ECCSCCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHHHTTSHHHHHH
T ss_pred cccccCCCCHHHHHHHHcCCCEEEcCCCCchheeeCCCCccccccCCCceeEECCCCHHHHHHHHHHHHHhcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999888999999999999999999999987666788999
Q ss_pred HHHHHHhcCCcHHHHHHHHHHHHHHHHcCCCCCCCCCCcccchhhhcCCC
Q 007224 563 MKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVATP 612 (612)
Q Consensus 563 ~~~~~~~~~sw~~~a~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (612)
++++++++|||++++++|+++|++|...++.|+.++++++|+++|+++||
T Consensus 487 ~~~am~~~fSW~~~A~~y~~ly~~L~~~~~~p~~~~~~~aP~~~~~~~~p 536 (536)
T 3vue_A 487 VRNCMNQDLSWKGPAKNWENVLLGLGVAGSAPGIEGDEIAPLAKENVAAP 536 (536)
T ss_dssp HHHHHHSCCSSHHHHHHHHHHHHTTCC-----------------------
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHhhhccCCCCCcccccCCCCCCCCCCC
Confidence 99999999999999999999999998888899999999999999999998
No 2
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=100.00 E-value=7.5e-50 Score=439.14 Aligned_cols=462 Identities=32% Similarity=0.577 Sum_probs=351.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEE-EEE-eCCeeeEEEEEEeeecCc
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVI-ELK-VGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~gv 162 (612)
|||++|+.+++|....||++.++..|+++|+++||+|+|+++.++.....+...... ... .++ ...+.....+|+
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~gv 77 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAFPDIRRGVTDAQVVSRRDTFAG---HITLLFGHYNGV 77 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECCHHHHHHCTTCEEEEEECCTTC---CEEEEEEEETTE
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCccccccccccceeEEEecccCC---cEEEEEEEECCc
Confidence 899999999888656899999999999999999999999999754322211111000 000 000 122233345799
Q ss_pred eEEEEeChhhhhhhhcCCCCCc-ccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc
Q 007224 163 DRVFVDHPWFLAKVVWGKTQSK-IYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 241 (612)
Q Consensus 163 ~~~~l~~~~~~~~~~w~~~~~~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~ 241 (612)
++++++.+.++.+ .. +|....+.+|.++..++..++..+.++++.+.. ..+|| |||+|+|.++
T Consensus 78 ~v~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~D-ivh~~~~~~~ 141 (485)
T 2qzs_A 78 GIYLIDAPHLYDR-------PGSPYHDTNLFAYTDNVLRFALLGWVGAEMASGLDP--------FWRPD-VVHAHDWHAG 141 (485)
T ss_dssp EEEEEECHHHHCC-------SSCSSBCTTSCBCTTHHHHHHHHHHHHHHHTTTSST--------TCCCS-EEEEETGGGT
T ss_pred EEEEEeChhhccC-------CCCccCCcccCCCCchHHHHHHHHHHHHHHHHHhcc--------CCCCC-EEEeeccchh
Confidence 9999887655443 22 565545556788888887787777777665421 13799 9999999988
Q ss_pred hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEE
Q 007224 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 321 (612)
+++.+++... .++|+|+++|+..+++.++...+..++++..+... ... .......+++..+..+|.+
T Consensus 142 ~~~~~~~~~~------~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~ad~v 208 (485)
T 2qzs_A 142 LAPAYLAARG------RPAKSVFTVHNLAYQGMFYAHHMNDIQLPWSFFNI----HGL---EFNGQISFLKAGLYYADHI 208 (485)
T ss_dssp THHHHHHHTT------CSSEEEEEESCTTCCCEEEGGGGGTTTCCGGGCST----TTT---EETTEEEHHHHHHHHCSEE
T ss_pred HHHHHHhhcc------CCCCEEEEecCccccCCCCHHHHHhcCCCchhccc----ccc---cccccccHHHHHHHhcCeE
Confidence 8877766311 58999999999876555443333333433322110 000 0011335778889999999
Q ss_pred EecCHHHHHHHHccccCCccchhhh--hc--cCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCC
Q 007224 322 LTVSPHYAQELVSGEDKGVELDNII--RK--TGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGL 397 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~g~~~~~~~--~~--~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl 397 (612)
+++|+..++.+.+. .+|...+.++ +. .++.+||||+|.+.|.|..+..+..+|+.+++ ..+...+..+++++|+
T Consensus 209 i~~S~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~ 286 (485)
T 2qzs_A 209 TAVSPTYAREITEP-QFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTL-EDKAENKRQLQIAMGL 286 (485)
T ss_dssp EESSHHHHHHTTSH-HHHTTCHHHHHHHHHTTCEEECCCCCCTTTSCTTTCTTSSSCCCTTCG-GGGHHHHHHHHHHHTC
T ss_pred EecCHHHHHHHhcc-ccCcchHHHHHhhccCCceEEEecCCCccccCccccccccccccccch-hHHHHhHHHHHHHcCC
Confidence 99999999988741 1233221111 11 48999999999999998877777778887775 5667778899999999
Q ss_pred CCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007224 398 PVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 398 ~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ 477 (612)
+.+++.++|+|+||+.++||++.+++|+.++.+++++|+|+|+|+..+.+.++++..++++++..+.+++.+.+..+|+.
T Consensus 287 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~ 366 (485)
T 2qzs_A 287 KVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGG 366 (485)
T ss_dssp CCCTTSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHHH
T ss_pred CCCCCCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHh
Confidence 86556789999999999999999999999997779999999999866888999999988777876667787777889999
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------ceEEEecccccccCCCCCCCHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVR 548 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~l~~~~~~~~~~v~~~d~~~la~~l~ 548 (612)
||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ ++.|+++++++|.
T Consensus 367 adv~v~pS~~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~ 436 (485)
T 2qzs_A 367 ADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDCSLENLADGVASGFVF----------EDSNAWSLLRAIR 436 (485)
T ss_dssp CSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------CSSSHHHHHHHHH
T ss_pred CCEEEECCccCCCcHHHHHHHHCCCCEEECCCCCccceeccCccccccccccceEEE----------CCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 899988 9999999999999
Q ss_pred HHHHhh-CHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 549 RALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 549 ~ll~~~-~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
++++.+ +++.+.+|++++..+.|||+.++++|+++|+++...
T Consensus 437 ~ll~~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~ly~~~~~~ 479 (485)
T 2qzs_A 437 RAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLKLE 479 (485)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHcCCHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHhhhh
Confidence 999421 277888999998889999999999999999998643
No 3
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=100.00 E-value=8.5e-50 Score=438.73 Aligned_cols=464 Identities=35% Similarity=0.571 Sum_probs=353.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCc-cEEEEEEeCCeeeEEEEEEeeecCce
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDT-DVVIELKVGDKIEKVRFFHCHKRGVD 163 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~gv~ 163 (612)
|||++|+.+++|....||++.++..|+++|+++||+|+|+++.++.....+.. ....+..+... ...+..+...+|++
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gv~ 79 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLG-EKADLLEVQHERLD 79 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECCHHHHHHCCSCEEEEEESCSSS-CCEEEEEEEETTEE
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEecccccccccccccceeEEEEEecC-CeEEEEEEEecCce
Confidence 89999999998865589999999999999999999999999975432221111 00001100000 01233334458999
Q ss_pred EEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchH
Q 007224 164 RVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI 243 (612)
Q Consensus 164 ~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~ 243 (612)
++.++.+.++.+ . ..+|+...+.+|.++..++..++..+.++++.+- ..++|| |||+|+|.++++
T Consensus 80 v~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~D-iIh~~~~~~~~~ 144 (485)
T 1rzu_A 80 LLILDAPAYYER-----S-GGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVL--------PGWRPD-MVHAHDWQAAMT 144 (485)
T ss_dssp EEEEECHHHHCS-----S-SCSSBCTTSSBCTTHHHHHHHHHHHHHHHHTTCS--------SSCCCS-EEEEEHHHHTTH
T ss_pred EEEEeChHHhCC-----C-ccccCCcccccccchHHHHHHHHHHHHHHHHHhc--------cCCCCC-EEEecccchhHH
Confidence 999887655433 0 1256554566688888888888877777766540 123799 999999888888
Q ss_pred HHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
+.+++... ..++|+|+++|+..+++.++...+..++++...... +.. .......+++..+..+|.+++
T Consensus 145 ~~~~~~~~-----~~~~p~v~t~H~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~ad~vi~ 212 (485)
T 1rzu_A 145 PVYMRYAE-----TPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGM----EGI---EYYNDVSFLKGGLQTATALST 212 (485)
T ss_dssp HHHHHHSS-----SCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSST----TTT---EETTEEEHHHHHHHHCSEEEE
T ss_pred HHHHhhcc-----cCCCCEEEEecCccccCCCCHHHHhhcCCChhhccc----ccc---cccccccHHHHHHhhcCEEEe
Confidence 77776531 148899999999877665554444444444332110 000 001123577888999999999
Q ss_pred cCHHHHHHHHccccCCccchhhh--hccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNII--RKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~--~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~ 401 (612)
+|+..++.+.+. .+|..++.++ ...++.+||||+|.+.|.|..+..+..+|+..++ ..+...+..+++++|++.+
T Consensus 213 ~S~~~~~~~~~~-~~g~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~~- 289 (485)
T 1rzu_A 213 VSPSYAEEILTA-EFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANL-KNRALNKKAVAEHFRIDDD- 289 (485)
T ss_dssp SCHHHHHHTTSH-HHHTTCHHHHHTTGGGEEECCCCBCTTTSCTTTCTTSSSCCBTTBC-TTHHHHHHHHHHHHTCCCS-
T ss_pred cCHhHHHHHhcc-ccCcchHHHHHhhcCCceEEcCCCcccccCCcccccccccccccch-hhHHHhHHHHHHhcCCCCC-
Confidence 999999998751 1232111111 1238999999999999998877777777877765 5667778889999999854
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
+.++|+|+||+.++||++.+++|+.++.+++++|+|+|+|+..+++.++++..++++++..+.+++.+.+..+|+.||++
T Consensus 290 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv~ 369 (485)
T 1rzu_A 290 GSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAI 369 (485)
T ss_dssp SSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHHCSEE
T ss_pred CCeEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhcCCEE
Confidence 24699999999999999999999999977899999999998768889999998887778766777888878899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---------ceEEEecccccccCCCCCCCHHHHHHHHHHHH-
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL- 551 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---------~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll- 551 (612)
|+||.+|+||++++|||+||+|||+|+.||+.|++.++ .+|+++ ++.|+++++++|.+++
T Consensus 370 v~pS~~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~~~~~~~~~~G~l~----------~~~d~~~la~~i~~ll~ 439 (485)
T 1rzu_A 370 IIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQF----------SPVTLDGLKQAIRRTVR 439 (485)
T ss_dssp EECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEE----------SSCSHHHHHHHHHHHHH
T ss_pred EECcccCCCCHHHHHHHHCCCCEEEeCCCChhheecccccccccccCCcceEe----------CCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998 899988 9999999999999999
Q ss_pred --HhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 552 --ATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 552 --~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
++ ++.+.++++++.++.|||+.++++|+++|++++..+
T Consensus 440 ~~~~--~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~~~~~~~ 479 (485)
T 1rzu_A 440 YYHD--PKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLISKG 479 (485)
T ss_dssp HHTC--HHHHHHHHHHHHTCCCBHHHHHHHHHHHHHHHTC--
T ss_pred HhCC--HHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhhCCC
Confidence 45 778889999888899999999999999999987543
No 4
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=100.00 E-value=4.1e-47 Score=409.84 Aligned_cols=423 Identities=24% Similarity=0.336 Sum_probs=327.3
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCc
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGV 162 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv 162 (612)
++|||++|+.+++| ...||++.++..|+++|+++||+|+|+++.++...+.. ...+.+.+.....+......+|+
T Consensus 1 r~MkIl~v~~~~~p-~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~gv 75 (439)
T 3fro_A 1 RHMKVLLLGFEFLP-VKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEE----IGKIRVFGEEVQVKVSYEERGNL 75 (439)
T ss_dssp CCCEEEEECSCCTT-SCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEE----EEEEEETTEEEEEEEEEEEETTE
T ss_pred CceEEEEEecccCC-cccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhh----hccccccCcccceeeeeccCCCc
Confidence 37999999999888 56899999999999999999999999999876554421 11122223445566666678999
Q ss_pred eEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcch-hHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccc
Q 007224 163 DRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS 241 (612)
Q Consensus 163 ~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~ 241 (612)
+++.++. .++.+ ..+|++ +.++ ..++..++..+.++++.+-. ..++|| |||+|+|..+
T Consensus 76 ~v~~~~~-~~~~~-------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~D-ii~~~~~~~~ 134 (439)
T 3fro_A 76 RIYRIGG-GLLDS-------EDVYGP-----GWDGLIRKAVTFGRASVLLLNDLLR-------EEPLPD-VVHFHDWHTV 134 (439)
T ss_dssp EEEEEES-GGGGC-------SSTTCS-----HHHHHHHHHHHHHHHHHHHHHHHTT-------TSCCCS-EEEEESGGGH
T ss_pred eEEEecc-hhccc-------cccccC-----CcchhhhhhHHHHHHHHHHHHHHhc-------cCCCCe-EEEecchhhh
Confidence 9999987 44444 344442 5566 77788888888888877611 123799 9999999988
Q ss_pred hHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEE
Q 007224 242 LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMV 321 (612)
Q Consensus 242 ~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v 321 (612)
+++.+++.. .++|+|+++|+...... +...+... ...+........+++..+..+|.+
T Consensus 135 ~~~~~~~~~-------~~~~~v~~~h~~~~~~~-~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~ad~i 192 (439)
T 3fro_A 135 FAGALIKKY-------FKIPAVFTIHRLNKSKL-PAFYFHEA--------------GLSELAPYPDIDPEHTGGYIADIV 192 (439)
T ss_dssp HHHHHHHHH-------HCCCEEEEESCCCCCCE-EHHHHHHT--------------TCGGGCCSSEECHHHHHHHHCSEE
T ss_pred hhHHHHhhc-------cCCCEEEEecccccccC-chHHhCcc--------------ccccccccceeeHhhhhhhhccEE
Confidence 888888754 48999999998654221 11000000 000000112346778889999999
Q ss_pred EecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCC
Q 007224 322 LTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDR 401 (612)
Q Consensus 322 i~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~ 401 (612)
+++|+.+++.... .++.+. .++.+||||+|.+.|.|... ...+...+..+++++|++.
T Consensus 193 i~~S~~~~~~~~~--~~~~~~------~~i~vi~ngvd~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~-- 250 (439)
T 3fro_A 193 TTVSRGYLIDEWG--FFRNFE------GKITYVFNGIDCSFWNESYL------------TGSRDERKKSLLSKFGMDE-- 250 (439)
T ss_dssp EESCHHHHHHTHH--HHGGGT------TSEEECCCCCCTTTSCGGGS------------CSCHHHHHHHHHHHHTCCS--
T ss_pred EecCHHHHHHHhh--hhhhcC------CceeecCCCCCchhcCcccc------------cchhhhhHHHHHHHcCCCC--
Confidence 9999999888442 122332 38999999999999877521 1234556888999999962
Q ss_pred CCcEEEEEcCcc-cccCHHHHHHHHHhccc----CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH
Q 007224 402 NIPVIGFIGRLE-EQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 402 ~~~~il~iGrl~-~~Kg~d~ll~a~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~ 476 (612)
+ ++|+|+||+. ++||++.+++|+.++.+ ++++|+|+|+|+..+.+.++++..++++.+.+.+..+.+.+..+|+
T Consensus 251 ~-~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~ 329 (439)
T 3fro_A 251 G-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYG 329 (439)
T ss_dssp C-EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHT
T ss_pred C-cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHH
Confidence 3 8999999999 99999999999999977 6899999999997778999999999884344444468888889999
Q ss_pred hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH-hhC
Q 007224 477 GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYG 555 (612)
Q Consensus 477 ~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~-~~~ 555 (612)
.||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++ +|+++ ++.|+++++++|.++++ +
T Consensus 330 ~adv~v~ps~~e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~-~g~~~----------~~~d~~~la~~i~~ll~~~-- 396 (439)
T 3fro_A 330 SVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNE-TGILV----------KAGDPGELANAILKALELS-- 396 (439)
T ss_dssp TCSEEEECBSCCSSCHHHHHHHHTTCEEEEESSTHHHHHCCTT-TCEEE----------CTTCHHHHHHHHHHHHHHT--
T ss_pred HCCEEEeCCCCCCccHHHHHHHHCCCCeEEcCCCCcceeEEcC-ceEEe----------CCCCHHHHHHHHHHHHhcC--
Confidence 9999999999999999999999999999999999999999887 99988 99999999999999999 6
Q ss_pred HHHHHHHHHHHHH--hcCCcHHHHHHHHHHHHHHHH
Q 007224 556 TQALAEMMKNGMA--QDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 556 ~~~~~~~~~~~~~--~~~sw~~~a~~~~~~y~~l~~ 589 (612)
++.+.++++++.. ++|||+.++++|+++|++++.
T Consensus 397 ~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 432 (439)
T 3fro_A 397 RSDLSKFRENCKKRAMSFSWEKSAERYVKAYTGSID 432 (439)
T ss_dssp TTTTHHHHHHHHHHHHTSCHHHHHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHH
Confidence 4445555555532 779999999999999998874
No 5
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=100.00 E-value=3.5e-41 Score=364.67 Aligned_cols=403 Identities=17% Similarity=0.234 Sum_probs=283.1
Q ss_pred CCCccccccCCCceEEEEeccccCcc-----ccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCC
Q 007224 73 NGPSLMIVCGVGLNILFVGTEVAPWS-----KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGD 147 (612)
Q Consensus 73 ~~~~~~~~~~~~MkIl~v~~~~~P~~-----~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~ 147 (612)
+.+.....++++|||++|+..|+|.. ..||.+.++..|+++|+++||+|+++++........
T Consensus 9 ~~~~~~~~~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~------------- 75 (438)
T 3c48_A 9 HHSSGLVPRGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGE------------- 75 (438)
T ss_dssp ----------CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCS-------------
T ss_pred ccccCcccCcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcc-------------
Confidence 33445556677899999999888842 369999999999999999999999999874321110
Q ss_pred eeeEEEEEEeeecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHh-hHhhccCCCCCCCCC
Q 007224 148 KIEKVRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEA-PRILNLNSNKYFSGP 226 (612)
Q Consensus 148 ~~~~~~~~~~~~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~ 226 (612)
.....+|++++.+....+... . ...-...+..+...+++. ++...
T Consensus 76 -------~~~~~~~v~v~~~~~~~~~~~-----------~------~~~~~~~~~~~~~~~~~~~~~~~~---------- 121 (438)
T 3c48_A 76 -------IVRVAENLRVINIAAGPYEGL-----------S------KEELPTQLAAFTGGMLSFTRREKV---------- 121 (438)
T ss_dssp -------EEEEETTEEEEEECCSCSSSC-----------C------GGGGGGGHHHHHHHHHHHHHHHTC----------
T ss_pred -------cccccCCeEEEEecCCCcccc-----------c------hhHHHHHHHHHHHHHHHHHHhccC----------
Confidence 011235677766642211000 0 000011122233333333 33221
Q ss_pred CCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 227 YGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 227 ~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+|| |||+|.|..++++.++... .++|+|+++|+........ +...... ....
T Consensus 122 -~~D-iv~~~~~~~~~~~~~~~~~-------~~~p~v~~~h~~~~~~~~~------~~~~~~~-------------~~~~ 173 (438)
T 3c48_A 122 -TYD-LIHSHYWLSGQVGWLLRDL-------WRIPLIHTAHTLAAVKNSY------RDDSDTP-------------ESEA 173 (438)
T ss_dssp -CCS-EEEEEHHHHHHHHHHHHHH-------HTCCEEEECSSCHHHHSCC----------CCH-------------HHHH
T ss_pred -CCC-EEEeCCccHHHHHHHHHHH-------cCCCEEEEecCCccccccc------ccccCCc-------------chHH
Confidence 399 9999987766666655554 3789999999754211000 0000000 0001
Q ss_pred chhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHH
Q 007224 307 KINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPL 386 (612)
Q Consensus 307 ~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~ 386 (612)
...+.+..++.+|.++++|+..++.+.+ .+|++.+ ++.+||||+|.+.|.+....
T Consensus 174 ~~~~~~~~~~~~d~ii~~s~~~~~~~~~--~~g~~~~------k~~vi~ngvd~~~~~~~~~~----------------- 228 (438)
T 3c48_A 174 RRICEQQLVDNADVLAVNTQEEMQDLMH--HYDADPD------RISVVSPGADVELYSPGNDR----------------- 228 (438)
T ss_dssp HHHHHHHHHHHCSEEEESSHHHHHHHHH--HHCCCGG------GEEECCCCCCTTTSCCC--------------------
T ss_pred HHHHHHHHHhcCCEEEEcCHHHHHHHHH--HhCCChh------heEEecCCccccccCCcccc-----------------
Confidence 1234466788999999999999999875 2566544 89999999999988765311
Q ss_pred HHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C--CcEEEEEeC----CchhHHHHHHHHHHHCC-
Q 007224 387 LKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E--NVQIIVLGT----GKKPMEKQLEQLEILYP- 457 (612)
Q Consensus 387 ~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~--~~~lvivG~----g~~~~~~~l~~l~~~~~- 457 (612)
.++.+++++|++. +.++|+|+||+.++||++.+++|+.++.+ + +++|+|+|. |. +.+.++++..+++
T Consensus 229 ~~~~~r~~~~~~~--~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g~--~~~~l~~~~~~~~l 304 (438)
T 3c48_A 229 ATERSRRELGIPL--HTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPNA--TPDTYRHMAEELGV 304 (438)
T ss_dssp -CHHHHHHTTCCS--SSEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC--------CHHHHHHHHTTC
T ss_pred hhhhhHHhcCCCC--CCcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCCc--HHHHHHHHHHHcCC
Confidence 1234788888863 45899999999999999999999999975 3 799999998 54 5667777777654
Q ss_pred -CceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCC
Q 007224 458 -EKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 458 -~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~ 536 (612)
+++.+.+..+.+.+..+|+.||++|+||..|+||++++|||+||+|||+++.||+.|++.++.+|+++ +
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~----------~ 374 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADIVAVPSFNESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLV----------D 374 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEE----------S
T ss_pred CCcEEEcCCCChHHHHHHHHhCCEEEECccccCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEEC----------C
Confidence 46888887788888899999999999999999999999999999999999999999999999999988 8
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHHHcCC
Q 007224 537 PVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGS 592 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~~~~ 592 (612)
+.|+++++++|.+++++ ++.+.++++++ +.+ |||+.++++|+++|++++....
T Consensus 375 ~~d~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~~~ 430 (438)
T 3c48_A 375 GHSPHAWADALATLLDD--DETRIRMGEDAVEHART-FSWAATAAQLSSLYNDAIANEN 430 (438)
T ss_dssp SCCHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHhhhcc
Confidence 99999999999999998 66666776665 345 9999999999999999987643
No 6
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=100.00 E-value=1.2e-40 Score=367.43 Aligned_cols=411 Identities=16% Similarity=0.143 Sum_probs=288.7
Q ss_pred CceEEEEeccccCcc---------ccccHHHHhhhhHHHHHhCCCeEEEEeecCCccc-ccCCccEEEEEEeCCeeeEEE
Q 007224 84 GLNILFVGTEVAPWS---------KTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVR 153 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~---------~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 153 (612)
+|||++|+..++|.. ..||++.++..|+++|+++||+|+|+++..+... ..+... .
T Consensus 7 ~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~-------------~- 72 (499)
T 2r60_A 7 IKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRRIKDENWPEFSGE-------------I- 72 (499)
T ss_dssp CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEECCCBTTBGGGCCS-------------E-
T ss_pred cceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCCCCcccccchhhh-------------H-
Confidence 599999999887742 4799999999999999999999999998643211 110000 0
Q ss_pred EEEee--ecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcE
Q 007224 154 FFHCH--KRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDV 231 (612)
Q Consensus 154 ~~~~~--~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDv 231 (612)
... .+|++++.+..... . ... ...-+..+..+...+.+.++... .+||
T Consensus 73 --~~~~~~~gv~v~~~~~~~~--~---------~~~------~~~~~~~~~~~~~~l~~~l~~~~----------~~~D- 122 (499)
T 2r60_A 73 --DYYQETNKVRIVRIPFGGD--K---------FLP------KEELWPYLHEYVNKIINFYREEG----------KFPQ- 122 (499)
T ss_dssp --EECTTCSSEEEEEECCSCS--S---------CCC------GGGCGGGHHHHHHHHHHHHHHHT----------CCCS-
T ss_pred --HhccCCCCeEEEEecCCCc--C---------CcC------HHHHHHHHHHHHHHHHHHHHhcC----------CCCC-
Confidence 001 24677766642210 0 000 00000111123334445554421 1599
Q ss_pred EEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCC-cccccccccccCCCCCcCCcchhH
Q 007224 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLP-AQFKSSFDFIDGYNKPVRGRKINW 310 (612)
Q Consensus 232 vih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 310 (612)
|||+|.+..++++.++... .++|+|+++|+........ +...+.. ..+...+. ......+
T Consensus 123 ivh~~~~~~~~~~~~~~~~-------~~~p~v~~~H~~~~~~~~~---~~~~~~~~~~~~~~~~---------~~~~~~~ 183 (499)
T 2r60_A 123 VVTTHYGDGGLAGVLLKNI-------KGLPFTFTGHSLGAQKMEK---LNVNTSNFKEMDERFK---------FHRRIIA 183 (499)
T ss_dssp EEEEEHHHHHHHHHHHHHH-------HCCCEEEECSSCHHHHHHT---TCCCSTTSHHHHHHHC---------HHHHHHH
T ss_pred EEEEcCCcchHHHHHHHHh-------cCCcEEEEccCcccccchh---hccCCCCcchhhhhHH---------HHHHHHH
Confidence 9999987666666656554 4789999999764311000 0000000 00000000 0011123
Q ss_pred HHHHHHhcCEEEecCHHHHHHHHccccCC-c----cchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchH
Q 007224 311 MKAGILESDMVLTVSPHYAQELVSGEDKG-V----ELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKP 385 (612)
Q Consensus 311 ~k~~~~~ad~vi~vS~~~~~~l~~~~~~g-~----~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~ 385 (612)
.+..++.+|.++++|+..++.+.+...+| + +.+ ++.+||||+|.+.|.+... .
T Consensus 184 ~~~~~~~ad~vi~~S~~~~~~~~~~~~~g~~~~~~~~~------ki~vi~ngvd~~~~~~~~~----------------~ 241 (499)
T 2r60_A 184 ERLTMSYADKIIVSTSQERFGQYSHDLYRGAVNVEDDD------KFSVIPPGVNTRVFDGEYG----------------D 241 (499)
T ss_dssp HHHHHHHCSEEEESSHHHHHHTTTSGGGTTTCCTTCGG------GEEECCCCBCTTTSSSCCC----------------H
T ss_pred HHHHHhcCCEEEECCHHHHHHHHhhhcccccccccCCC------CeEEECCCcChhhcCccch----------------h
Confidence 46778899999999999999987520135 4 333 8999999999998876531 1
Q ss_pred HHHHHHHHHhC-----CCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C-CcEEEEEeC--Cc-----------hh
Q 007224 386 LLKEALQAEVG-----LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E-NVQIIVLGT--GK-----------KP 444 (612)
Q Consensus 386 ~~k~~l~~~~g-----l~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~-~~~lvivG~--g~-----------~~ 444 (612)
..+..+++++| ++. +.++|+|+||+.++||++.+++|+.++.+ + .++|+|+|+ |+ ..
T Consensus 242 ~~~~~~r~~~~~~~~~~~~--~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~y~~l~~~~~~ 319 (499)
T 2r60_A 242 KIKAKITKYLERDLGSERM--ELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGIENPFEDYSRAGQEEKE 319 (499)
T ss_dssp HHHHHHHHHHHHHSCGGGT--TSCEEEECSCCCGGGCHHHHHHHHHTCHHHHHHCEEEEEESSCSBTTTBCTTSCHHHHH
T ss_pred hhHHHHHHHhcccccccCC--CCcEEEEeecCccccCHHHHHHHHHHHHHhCCCceEEEEECCCCCcccccccccccchH
Confidence 22466778877 653 45899999999999999999999999965 2 468999998 32 11
Q ss_pred HHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhc----CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec
Q 007224 445 MEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGA----DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE 518 (612)
Q Consensus 445 ~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~a----di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~ 518 (612)
|.+.++++..+++ +++.+.+..+.+.+..+|+.| |++|+||.+|+||++++|||+||+|||+|+.||+.|++.+
T Consensus 320 y~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~PvI~s~~~g~~e~v~~ 399 (499)
T 2r60_A 320 ILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDG 399 (499)
T ss_dssp HHHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTCCEEEESSBHHHHHTGG
T ss_pred HHHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCCCEEEecCCCHHHHhcC
Confidence 2778888888765 468888887888888999999 9999999999999999999999999999999999999999
Q ss_pred CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHHHcCCC
Q 007224 519 GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSE 593 (612)
Q Consensus 519 g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~~~~~ 593 (612)
+.+|+++ ++.|+++++++|.+++++ ++.+.++++++ +.++|||+.++++|+++|++++.....
T Consensus 400 ~~~g~l~----------~~~d~~~la~~i~~ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~y~~~~~~~~~ 465 (499)
T 2r60_A 400 GKYGVLV----------DPEDPEDIARGLLKAFES--EETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDE 465 (499)
T ss_dssp GTSSEEE----------CTTCHHHHHHHHHHHHSC--HHHHHHHHHHHHHHHHHHSBHHHHHHHHHHHHHHHHHC---
T ss_pred CceEEEe----------CCCCHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhh
Confidence 9999988 999999999999999997 66666776665 456799999999999999999876443
No 7
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=100.00 E-value=2.5e-40 Score=351.88 Aligned_cols=369 Identities=21% Similarity=0.275 Sum_probs=279.7
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCccc-ccCCccEEEEEEeCCeeeEEEEEEeeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYK-DAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
|++|||++|+..++|. .||.+.++..|+++| +||+|+|+++..+... ..++ ...
T Consensus 2 ~~~mkIl~v~~~~~p~--~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~~---------------------~~~ 56 (394)
T 3okp_A 2 SASRKTLVVTNDFPPR--IGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAYD---------------------KTL 56 (394)
T ss_dssp --CCCEEEEESCCTTS--CSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHHH---------------------TTC
T ss_pred CCCceEEEEeCccCCc--cchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhhc---------------------ccc
Confidence 5679999999988886 899999999999999 6999999999754321 1000 113
Q ss_pred CceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc
Q 007224 161 GVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 240 (612)
Q Consensus 161 gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~ 240 (612)
++.++.+....++ .. ..+...+.+.++.. +|| +||+|....
T Consensus 57 ~~~~~~~~~~~~~---------------------~~-----~~~~~~l~~~~~~~------------~~D-vv~~~~~~~ 97 (394)
T 3okp_A 57 DYEVIRWPRSVML---------------------PT-----PTTAHAMAEIIRER------------EID-NVWFGAAAP 97 (394)
T ss_dssp SSEEEEESSSSCC---------------------SC-----HHHHHHHHHHHHHT------------TCS-EEEESSCTT
T ss_pred ceEEEEccccccc---------------------cc-----hhhHHHHHHHHHhc------------CCC-EEEECCcch
Confidence 4555544321110 00 12233444444443 699 889987544
Q ss_pred c-hHHHHHHHhhcCCCCCCCc-eEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhc
Q 007224 241 S-LIPCYLKTMYKPKGMYKSA-KVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILES 318 (612)
Q Consensus 241 ~-~~~~~l~~~~~~~~~~~~~-~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~a 318 (612)
. ++..+++. .++ ++++++|+...... .......+++..++.+
T Consensus 98 ~~~~~~~~~~--------~~~~~~i~~~h~~~~~~~----------------------------~~~~~~~~~~~~~~~~ 141 (394)
T 3okp_A 98 LALMAGTAKQ--------AGASKVIASTHGHEVGWS----------------------------MLPGSRQSLRKIGTEV 141 (394)
T ss_dssp GGGGHHHHHH--------TTCSEEEEECCSTHHHHT----------------------------TSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHh--------cCCCcEEEEeccchhhhh----------------------------hcchhhHHHHHHHHhC
Confidence 3 34434433 355 48889996432000 0012334567788999
Q ss_pred CEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCC
Q 007224 319 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 319 d~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~ 398 (612)
|.++++|+..++.+.+. ++. ..++.+||||+|.+.|.|.. ...+..+++++|++
T Consensus 142 d~ii~~s~~~~~~~~~~--~~~-------~~~~~vi~ngv~~~~~~~~~-----------------~~~~~~~~~~~~~~ 195 (394)
T 3okp_A 142 DVLTYISQYTLRRFKSA--FGS-------HPTFEHLPSGVDVKRFTPAT-----------------PEDKSATRKKLGFT 195 (394)
T ss_dssp SEEEESCHHHHHHHHHH--HCS-------SSEEEECCCCBCTTTSCCCC-----------------HHHHHHHHHHTTCC
T ss_pred CEEEEcCHHHHHHHHHh--cCC-------CCCeEEecCCcCHHHcCCCC-----------------chhhHHHHHhcCCC
Confidence 99999999999998862 222 12899999999999887742 22367889999987
Q ss_pred CCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH
Q 007224 399 VDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA 476 (612)
Q Consensus 399 ~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~ 476 (612)
. +.++|+|+||+.++||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++......++.+.+..+.+.+..+|+
T Consensus 196 ~--~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~~~~~~~ 271 (394)
T 3okp_A 196 D--TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGSGR--YESTLRRLATDVSQNVKFLGRLEYQDMINTLA 271 (394)
T ss_dssp T--TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECCCT--THHHHHHHTGGGGGGEEEEESCCHHHHHHHHH
T ss_pred c--CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcCch--HHHHHHHHHhcccCeEEEcCCCCHHHHHHHHH
Confidence 4 44899999999999999999999999866 699999999987 66777777755556788888888888899999
Q ss_pred hcCEEEeCCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 477 GADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 477 ~adi~l~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
.||++|+||.+ |+||++++|||++|+|||+++.||..|++.++ +|+++ ++.|+++++++|.+
T Consensus 272 ~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~-~g~~~----------~~~d~~~l~~~i~~ 340 (394)
T 3okp_A 272 AADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPA-TGLVV----------EGSDVDKLSELLIE 340 (394)
T ss_dssp HCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCTT-TEEEC----------CTTCHHHHHHHHHH
T ss_pred hCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhcC-CceEe----------CCCCHHHHHHHHHH
Confidence 99999999999 99999999999999999999999999999999 99987 89999999999999
Q ss_pred HHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHHHcCCC
Q 007224 550 ALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLEVAGSE 593 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~~~~~ 593 (612)
++++ ++.+.++++++ +.++|||+.++++|+++|+++......
T Consensus 341 l~~~--~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~r~~~~ 385 (394)
T 3okp_A 341 LLDD--PIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEPRKLAA 385 (394)
T ss_dssp HHTC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHSCCC----
T ss_pred HHhC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHhccCcch
Confidence 9997 66667776665 457899999999999999998755443
No 8
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=100.00 E-value=3.6e-38 Score=336.65 Aligned_cols=368 Identities=18% Similarity=0.182 Sum_probs=263.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|+.-++...| |. .||.+.++..|+++|+++||+|+++++..+.... ...+++.+
T Consensus 14 ~~~~~~~~~~-p~--~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~-----------------------~~~~~i~~ 67 (394)
T 2jjm_A 14 MKLKIGITCY-PS--VGGSGVVGTELGKQLAERGHEIHFITSGLPFRLN-----------------------KVYPNIYF 67 (394)
T ss_dssp -CCEEEEECC-C----CHHHHHHHHHHHHHHHTTCEEEEECSSCC---------------------------CCCTTEEE
T ss_pred heeeeehhcC-CC--CCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCccc-----------------------ccCCceEE
Confidence 5555555554 53 7999999999999999999999999986321100 01123333
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchH-
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLI- 243 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~- 243 (612)
..++.+.+. .+. +.. .. ..+...+.+.++.. +|| |||+|.+....+
T Consensus 68 ~~~~~~~~~-----------~~~------~~~--~~-~~~~~~l~~~l~~~------------~~D-vv~~~~~~~~~~~ 114 (394)
T 2jjm_A 68 HEVTVNQYS-----------VFQ------YPP--YD-LALASKMAEVAQRE------------NLD-ILHVHYAIPHAIC 114 (394)
T ss_dssp ECCCCC---------------CC------SCC--HH-HHHHHHHHHHHHHH------------TCS-EEEECSSTTHHHH
T ss_pred Eeccccccc-----------ccc------ccc--cc-HHHHHHHHHHHHHc------------CCC-EEEEcchhHHHHH
Confidence 322211100 000 000 01 12233444444443 699 999997554433
Q ss_pred HHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEe
Q 007224 244 PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLT 323 (612)
Q Consensus 244 ~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~ 323 (612)
..+++.... .++|+++++|+.... .+ +. ......+++..+..+|.+++
T Consensus 115 ~~~~~~~~~-----~~~p~v~~~h~~~~~-~~--------~~------------------~~~~~~~~~~~~~~ad~ii~ 162 (394)
T 2jjm_A 115 AYLAKQMIG-----ERIKIVTTLHGTDIT-VL--------GS------------------DPSLNNLIRFGIEQSDVVTA 162 (394)
T ss_dssp HHHHHHHTT-----TCSEEEEECCHHHHH-TT--------TT------------------CTTTHHHHHHHHHHSSEEEE
T ss_pred HHHHHHhhc-----CCCCEEEEEecCccc-cc--------CC------------------CHHHHHHHHHHHhhCCEEEE
Confidence 333333321 268999999974320 00 00 01123456777889999999
Q ss_pred cCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCC
Q 007224 324 VSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNI 403 (612)
Q Consensus 324 vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~ 403 (612)
+|+..++.+.+. ++. . .++.+||||+|.+.|.+.. +..++++++++. +.
T Consensus 163 ~s~~~~~~~~~~--~~~-~------~~~~vi~ngv~~~~~~~~~--------------------~~~~~~~~~~~~--~~ 211 (394)
T 2jjm_A 163 VSHSLINETHEL--VKP-N------KDIQTVYNFIDERVYFKRD--------------------MTQLKKEYGISE--SE 211 (394)
T ss_dssp SCHHHHHHHHHH--TCC-S------SCEEECCCCCCTTTCCCCC--------------------CHHHHHHTTCC-----
T ss_pred CCHHHHHHHHHh--hCC-c------ccEEEecCCccHHhcCCcc--------------------hHHHHHHcCCCC--CC
Confidence 999999998862 222 1 2899999999999887653 345677888753 45
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHhcCE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~adi 480 (612)
++|+|+||+.++||++.+++|+.++.+ .+++|+|+|+|+ ..+.++++..+++ +++.+.+ + .+.+..+|+.||+
T Consensus 212 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~l~~~~~~~~l~~~v~~~g-~-~~~~~~~~~~adv 287 (394)
T 2jjm_A 212 KILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGP--EFCTILQLVKNLHIEDRVLFLG-K-QDNVAELLAMSDL 287 (394)
T ss_dssp CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCT--THHHHHHHHHTTTCGGGBCCCB-S-CSCTHHHHHTCSE
T ss_pred eEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCch--HHHHHHHHHHHcCCCCeEEEeC-c-hhhHHHHHHhCCE
Confidence 899999999999999999999999976 579999999987 4667777777664 3455554 3 3445679999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
+|+||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++ ++.+.
T Consensus 288 ~v~ps~~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~~~g~~~----------~~~d~~~la~~i~~l~~~--~~~~~ 355 (394)
T 2jjm_A 288 MLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEVIQHGDTGYLC----------EVGDTTGVADQAIQLLKD--EELHR 355 (394)
T ss_dssp EEECCSCCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBTTTEEEE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred EEeccccCCCchHHHHHHhcCCCEEEecCCChHHHhhcCCceEEe----------CCCCHHHHHHHHHHHHcC--HHHHH
Confidence 999999999999999999999999999999999999999999988 899999999999999998 66666
Q ss_pred HHHHHH---HHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 561 EMMKNG---MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 561 ~~~~~~---~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
++++++ +.+.|||+.++++|+++|++++..
T Consensus 356 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 388 (394)
T 2jjm_A 356 NMGERARESVYEQFRSEKIVSQYETIYYDVLRD 388 (394)
T ss_dssp HHHHHHHHHHHHHSCHHHHHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 776665 358999999999999999998754
No 9
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=100.00 E-value=4.4e-39 Score=369.24 Aligned_cols=427 Identities=15% Similarity=0.180 Sum_probs=281.9
Q ss_pred CceEEEEecccc---------CccccccHHHHhhh--------hHHHHHhCCCeEE----EEeecCCcccccCCccEEEE
Q 007224 84 GLNILFVGTEVA---------PWSKTGGLGDVLGG--------LPPALAANGHRVM----TIAPRYDQYKDAWDTDVVIE 142 (612)
Q Consensus 84 ~MkIl~v~~~~~---------P~~~~GG~~~~~~~--------La~~L~~~Gh~V~----vit~~~~~~~~~~~~~~~~~ 142 (612)
.|+|++|+...+ |. +||...|+.+ |+++|+++||+|+ |+|...+.. ..++.....+
T Consensus 278 ~~~i~~is~hg~~~~~~~lG~~d--tGGq~vyV~e~~~al~~ela~~L~~~G~~V~~~V~v~Tr~~~~~-~g~~y~~~~e 354 (816)
T 3s28_A 278 VFNVVILSPHGYFAQDNVLGYPD--TGGQVVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLLPDA-VGTTCGERLE 354 (816)
T ss_dssp CCEEEEECCSSCCCSSSCTTSTT--CSHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECCTTC-TTSSTTSSEE
T ss_pred eeEEEEEcCCcccCccccCCCCC--CCCceeeHHHHHHHHHHHHHHHHHHCCCccceeeEEEeCCCCCC-CCCccCCcce
Confidence 589999998766 65 9999999984 7777788999886 888875432 1111111111
Q ss_pred EEeCCeeeEEEEEEeeecCceEEEEeChh---hhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHH-HHHHHhhHhhccC
Q 007224 143 LKVGDKIEKVRFFHCHKRGVDRVFVDHPW---FLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLC-QAALEAPRILNLN 218 (612)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~gv~~~~l~~~~---~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~ 218 (612)
. + ...+|+.++.++... +..+ |-. ...++. | ...|. ..+..+++...
T Consensus 355 ~-i-----------~~~~gv~I~RvP~~~~~g~l~~--~l~-k~~L~~------~------L~~F~~~~l~~il~~~~-- 405 (816)
T 3s28_A 355 R-V-----------YDSEYCDILRVPFRTEKGIVRK--WIS-RFEVWP------Y------LETYTEDAAVELSKELN-- 405 (816)
T ss_dssp E-C-----------TTCSSEEEEEECEEETTEEECS--CCC-TTTCGG------G------HHHHHHHHHHHHHHHCS--
T ss_pred e-e-----------cCcCCeEEEEecCCCccccccc--ccc-HHHHHH------H------HHHHHHHHHHHHHHhcC--
Confidence 0 0 002466676664211 0000 000 011111 1 12233 33334444332
Q ss_pred CCCCCCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCc-cccccccccc
Q 007224 219 SNKYFSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPA-QFKSSFDFID 297 (612)
Q Consensus 219 ~~~~~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~ 297 (612)
.+|| |||+|.|.+++++.+++.. .++|+|+|.|+........ .+... .+...+.+
T Consensus 406 --------~~PD-VIHsH~~~sglva~llar~-------~gvP~V~T~Hsl~~~k~~~------~~~~~~~~~~~y~~-- 461 (816)
T 3s28_A 406 --------GKPD-LIIGNYSDGNLVASLLAHK-------LGVTQCTIAHALEKTKYPD------SDIYWKKLDDKYHF-- 461 (816)
T ss_dssp --------SCCS-EEEEEHHHHHHHHHHHHHH-------HTCCEEEECSCCHHHHSTT------TTTTHHHHHHHHCH--
T ss_pred --------CCCe-EEEeCCchHHHHHHHHHHH-------cCCCEEEEEeccccccccc------ccchhhhHHHHHHH--
Confidence 2699 9999999998888888776 4899999999765322110 00000 00000000
Q ss_pred CCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccc-cCCcc----ch---------hhhhccCeEEeeCCCccCcc
Q 007224 298 GYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGE-DKGVE----LD---------NIIRKTGIKGIVNGMDVQEW 363 (612)
Q Consensus 298 ~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~-~~g~~----~~---------~~~~~~~i~vI~Ngvd~~~~ 363 (612)
...+...+..+..||.|+++|+..++.+.... .++.. .. ... ..++.+||||+|.+.|
T Consensus 462 -------~~r~~aE~~~l~~AD~VIa~S~~~~~~l~~~~~~y~~~~~~~~p~Lyr~~~gI~~~-~~ki~VIpnGVD~~~F 533 (816)
T 3s28_A 462 -------SCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFTLPGLYRVVHGIDVF-DPKFNIVSPGADMSIY 533 (816)
T ss_dssp -------HHHHHHHHHHHHHSSEEEESCHHHHHCCSSSCCTTGGGSSEEETTTEEEEESCCTT-CTTEEECCCCCCTTTS
T ss_pred -------HHHHHHHHHHHHhCCEEEECCHHHHHHHHHHHHHhhhhhccccchhhhcccccccC-CCCEEEECCCcCHHHc
Confidence 00112244578899999999999998643210 11110 00 001 1289999999999999
Q ss_pred CCCCccc--cccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEe
Q 007224 364 NPLTDKY--IGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG 439 (612)
Q Consensus 364 ~p~~~~~--~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG 439 (612)
.|...+. +...++.. .....++...++.+|+..+++.++|+|+||+.++||++.+++|+.++.+ ++++|+|+|
T Consensus 534 ~P~~~~~~Rl~~~~~~i---~~~l~~p~~~r~~lg~l~~~~~~vIl~vGRl~~~KGid~LIeA~~~L~~~~~~v~LvIvG 610 (816)
T 3s28_A 534 FPYTEEKRRLTKFHSEI---EELLYSDVENKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVG 610 (816)
T ss_dssp CCTTCTTTCCGGGHHHH---HHHHHCSCCBTTEESCBSCTTSCEEEEECCCCTTTTHHHHHHHHHHCHHHHHHCEEEEEC
T ss_pred Cccchhhhhhhhccccc---cccccchhhHHHHhcccCCCCCeEEEEEccCcccCCHHHHHHHHHHHHhhCCCeEEEEEe
Confidence 8865321 00000000 0000011123455666445677999999999999999999999999976 689999999
Q ss_pred CCch---------hHHHHHHHHHHHCC--CceEEEecc----ChHHHHHHHH-hcCEEEeCCCCCCCcHHHHHHHHcCCc
Q 007224 440 TGKK---------PMEKQLEQLEILYP--EKARGVAKF----NIPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTV 503 (612)
Q Consensus 440 ~g~~---------~~~~~l~~l~~~~~--~~i~~~~~~----~~~~~~~~l~-~adi~l~pS~~E~~gl~~lEAma~G~P 503 (612)
+|.. .+.+.++++..+++ +++.+.+.. +.+.+..+++ .+|++|+||.+|+||++++|||+||+|
T Consensus 611 ~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~P 690 (816)
T 3s28_A 611 GDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLP 690 (816)
T ss_dssp CCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCCCCHHHHHHHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTCC
T ss_pred CCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCccccCCHHHHHHHHHhcCeEEEECCCccCccHHHHHHHHcCCC
Confidence 9872 35677778877776 466666533 2355666777 689999999999999999999999999
Q ss_pred eEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHH----HhhCHHHHHHHHHHH---HHhcCCcHHH
Q 007224 504 PIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL----ATYGTQALAEMMKNG---MAQDLSWKGP 576 (612)
Q Consensus 504 vI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll----~~~~~~~~~~~~~~~---~~~~~sw~~~ 576 (612)
||+|+.||+.|++.++.+|+++ ++.|+++++++|.+++ .+ ++.+.++++++ +.++|||+.+
T Consensus 691 VIasd~GG~~EiV~dg~~Gllv----------~p~D~e~LA~aI~~lL~~Ll~d--~~~~~~m~~~ar~~a~~~fSwe~~ 758 (816)
T 3s28_A 691 TFATCKGGPAEIIVHGKSGFHI----------DPYHGDQAADTLADFFTKCKED--PSHWDEISKGGLQRIEEKYTWQIY 758 (816)
T ss_dssp EEEESSBTHHHHCCBTTTBEEE----------CTTSHHHHHHHHHHHHHHHHHC--THHHHHHHHHHHHHHHHSCCHHHH
T ss_pred EEEeCCCChHHHHccCCcEEEe----------CCCCHHHHHHHHHHHHHHhccC--HHHHHHHHHHHHHHHHHhCCHHHH
Confidence 9999999999999999999988 9999999999998777 66 56667777666 4589999999
Q ss_pred HHHHHHHHHHHHH
Q 007224 577 AKKWEETLLNLEV 589 (612)
Q Consensus 577 a~~~~~~y~~l~~ 589 (612)
+++|+++|+.+..
T Consensus 759 a~~ll~lY~~~g~ 771 (816)
T 3s28_A 759 SQRLLTLTGVYGF 771 (816)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhH
Confidence 9999999998753
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=100.00 E-value=1e-37 Score=335.49 Aligned_cols=363 Identities=14% Similarity=0.122 Sum_probs=257.5
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecC
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRG 161 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 161 (612)
|++|||++++.. + ..||.+.++..|+++|+++||+|++++...+. +..+. ..+
T Consensus 38 ~~~mkIl~v~~~--~--~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~~--~~~~~---------------------~~~ 90 (416)
T 2x6q_A 38 LKGRSFVHVNST--S--FGGGVAEILHSLVPLLRSIGIEARWFVIEGPT--EFFNV---------------------TKT 90 (416)
T ss_dssp TTTCEEEEEESC--S--SSSTHHHHHHHHHHHHHHTTCEEEEEECCCCH--HHHHH---------------------HHH
T ss_pred hhccEEEEEeCC--C--CCCCHHHHHHHHHHHHHhCCCeEEEEEccCCc--chhhh---------------------hcc
Confidence 668999999976 3 37999999999999999999999999875321 00000 000
Q ss_pred ceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcch-hHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCcc
Q 007224 162 VDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDN-QLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHT 240 (612)
Q Consensus 162 v~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~ 240 (612)
+. ..+.. ...+. +... ...+..+...+.+.++. .+|| |||+|++..
T Consensus 91 ~~-------~~~~~-------~~~~~------~~~~~~~~~~~~~~~~~~~l~~------------~~~D-vv~~~~~~~ 137 (416)
T 2x6q_A 91 FH-------NALQG-------NESLK------LTEEMKELYLNVNRENSKFIDL------------SSFD-YVLVHDPQP 137 (416)
T ss_dssp HH-------HHHTT-------CCSCC------CCHHHHHHHHHHHHHHHHSSCG------------GGSS-EEEEESSTT
T ss_pred cc-------eeecc-------ccccc------ccHHHHHHHHHHHHHHHHHHhh------------cCCC-EEEEeccch
Confidence 00 00000 00110 1111 11122222333333332 2699 999998765
Q ss_pred chHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCE
Q 007224 241 SLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDM 320 (612)
Q Consensus 241 ~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~ 320 (612)
..+..+++ ..+|+++++|+..... ....+.+++..+..+|.
T Consensus 138 ~~~~~~~~---------~~~p~v~~~h~~~~~~------------------------------~~~~~~~~~~~~~~~~~ 178 (416)
T 2x6q_A 138 AALIEFYE---------KKSPWLWRCHIDLSSP------------------------------NREFWEFLRRFVEKYDR 178 (416)
T ss_dssp GGGGGGSC---------CCSCEEEECCSCCSSC------------------------------CHHHHHHHHHHHTTSSE
T ss_pred hhHHHHHH---------hcCCEEEEEccccCCc------------------------------cHHHHHHHHHHHHhCCE
Confidence 44332211 2389999999643210 01233455666778888
Q ss_pred EE-ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCC
Q 007224 321 VL-TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPV 399 (612)
Q Consensus 321 vi-~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~ 399 (612)
++ ++|+..++.+ + ..++.+||||+|...+.+... ....+..+++++|++.
T Consensus 179 ~i~~~s~~~~~~~--------~------~~~~~vi~ngvd~~~~~~~~~---------------~~~~~~~~r~~~~~~~ 229 (416)
T 2x6q_A 179 YIFHLPEYVQPEL--------D------RNKAVIMPPSIDPLSEKNVEL---------------KQTEILRILERFDVDP 229 (416)
T ss_dssp EEESSGGGSCTTS--------C------TTTEEECCCCBCTTSTTTSCC---------------CHHHHHHHHHHTTCCT
T ss_pred EEEechHHHHhhC--------C------ccceEEeCCCCChhhhccccc---------------ChhhHHHHHHHhCCCC
Confidence 76 5665443321 1 127999999999877654321 1223567888999874
Q ss_pred CCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCc---hhHHHHHHHHHHHCC--CceEEEecc---ChH
Q 007224 400 DRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGK---KPMEKQLEQLEILYP--EKARGVAKF---NIP 469 (612)
Q Consensus 400 ~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~---~~~~~~l~~l~~~~~--~~i~~~~~~---~~~ 469 (612)
+.++|+|+||+.++||++.+++|+..+.+ ++++|+|+|+|+ +.+.+.++++..+++ +++.+.+.+ +.+
T Consensus 230 --~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~ 307 (416)
T 2x6q_A 230 --EKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAR 307 (416)
T ss_dssp --TSCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHH
T ss_pred --CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHH
Confidence 45899999999999999999999999966 689999999986 234566777766654 467777644 356
Q ss_pred HHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 470 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 470 ~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
.+..+|+.||++|+||.+|+||++++|||+||+|||+++.||+.|++.++.+|+++ + |+++++++|.+
T Consensus 308 ~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~~~g~l~----------~--d~~~la~~i~~ 375 (416)
T 2x6q_A 308 EVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDGETGFLV----------R--DANEAVEVVLY 375 (416)
T ss_dssp HHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBTTTEEEE----------S--SHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEECCCcCCCccHHHHHHHcCCCEEEccCCCChhheecCCCeEEE----------C--CHHHHHHHHHH
Confidence 78889999999999999999999999999999999999999999999999999987 5 99999999999
Q ss_pred HHHhhCHHHHHHHHHHH---HHhcCCcHHHHHHHHHHHHHHH
Q 007224 550 ALATYGTQALAEMMKNG---MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~---~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
++++ ++.+.++++++ +.++|||+.++++|+++|++++
T Consensus 376 ll~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~l~ 415 (416)
T 2x6q_A 376 LLKH--PEVSKEMGAKAKERVRKNFIITKHMERYLDILNSLG 415 (416)
T ss_dssp HHHC--HHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHHTC-
T ss_pred HHhC--HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHhh
Confidence 9998 66677777666 4578999999999999998764
No 11
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=100.00 E-value=1e-37 Score=333.27 Aligned_cols=367 Identities=18% Similarity=0.194 Sum_probs=262.6
Q ss_pred cccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEee
Q 007224 79 IVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCH 158 (612)
Q Consensus 79 ~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (612)
....++|||++|+..++|. .||.+.++..|+++|+++||+|+++++...... +.... .
T Consensus 15 ~~~~~~MkIl~i~~~~~~~--~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~--~~~~~------------------~ 72 (406)
T 2gek_A 15 VPRGSHMRIGMVCPYSFDV--PGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVK--LPDYV------------------V 72 (406)
T ss_dssp ------CEEEEECSSCTTS--CCHHHHHHHHHHHHHHHTTCEEEEEESCCTTSC--CCTTE------------------E
T ss_pred ccCCCcceEEEEeccCCCC--CCcHHHHHHHHHHHHHHCCCeEEEEecCCcccc--CCccc------------------c
Confidence 3444579999999765553 699999999999999999999999998743220 00000 0
Q ss_pred ecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCC
Q 007224 159 KRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDW 238 (612)
Q Consensus 159 ~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~ 238 (612)
..+ +++.+... .. + ..+. +. ..+...+.+.++.. +|| |||+|.+
T Consensus 73 ~~~-~~~~~~~~---~~--~----~~~~-------~~------~~~~~~l~~~l~~~------------~~D-ii~~~~~ 116 (406)
T 2gek_A 73 SGG-KAVPIPYN---GS--V----ARLR-------FG------PATHRKVKKWIAEG------------DFD-VLHIHEP 116 (406)
T ss_dssp ECC-CCC----------------------------CC------HHHHHHHHHHHHHH------------CCS-EEEEECC
T ss_pred cCC-cEEecccc---CC--c----cccc-------cc------HHHHHHHHHHHHhc------------CCC-EEEECCc
Confidence 011 11111100 00 0 0000 00 01223334444443 699 8899887
Q ss_pred ccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhc
Q 007224 239 HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILES 318 (612)
Q Consensus 239 ~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~a 318 (612)
....+...+... .++|+++++|+...... .. .....+++..+..+
T Consensus 117 ~~~~~~~~~~~~-------~~~~~i~~~h~~~~~~~--------------~~--------------~~~~~~~~~~~~~~ 161 (406)
T 2gek_A 117 NAPSLSMLALQA-------AEGPIVATFHTSTTKSL--------------TL--------------SVFQGILRPYHEKI 161 (406)
T ss_dssp CSSSHHHHHHHH-------EESSEEEEECCCCCSHH--------------HH--------------HHHHSTTHHHHTTC
T ss_pred cchHHHHHHHHh-------cCCCEEEEEcCcchhhh--------------hH--------------HHHHHHHHHHHhhC
Confidence 766554444443 37899999997432110 00 01112233567899
Q ss_pred CEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCC
Q 007224 319 DMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLP 398 (612)
Q Consensus 319 d~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~ 398 (612)
|.++++|+..++.+.+. ++. .++ +||||+|...|.+.... .+++
T Consensus 162 d~ii~~s~~~~~~~~~~--~~~--------~~~-vi~~~v~~~~~~~~~~~-------------------------~~~~ 205 (406)
T 2gek_A 162 IGRIAVSDLARRWQMEA--LGS--------DAV-EIPNGVDVASFADAPLL-------------------------DGYP 205 (406)
T ss_dssp SEEEESSHHHHHHHHHH--HSS--------CEE-ECCCCBCHHHHHTCCCC-------------------------TTCS
T ss_pred CEEEECCHHHHHHHHHh--cCC--------CcE-EecCCCChhhcCCCchh-------------------------hhcc
Confidence 99999999999988751 332 278 99999998877654311 1122
Q ss_pred CCCCCcEEEEEcCc-ccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007224 399 VDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 399 ~~~~~~~il~iGrl-~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l 475 (612)
++.++|+|+||+ .+.||++.+++++.++.+ ++++|+|+|.++. +.++++..++..++.+.+..+.+++..+|
T Consensus 206 --~~~~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~---~~l~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (406)
T 2gek_A 206 --REGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE---DELREQAGDLAGHLRFLGQVDDATKASAM 280 (406)
T ss_dssp --CSSCEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH---HHHHHHTGGGGGGEEECCSCCHHHHHHHH
T ss_pred --CCCeEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH---HHHHHHHHhccCcEEEEecCCHHHHHHHH
Confidence 245799999999 999999999999999976 6899999999883 66777766655568888777888888999
Q ss_pred HhcCEEEeCCC-CCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 476 AGADFILIPSR-FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 476 ~~adi~l~pS~-~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
+.||++|+||. .|+||++++|||+||+|||+++.||+.|++.++.+|+++ ++.|+++++++|.+++++
T Consensus 281 ~~adv~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~~~g~~~----------~~~d~~~l~~~i~~l~~~- 349 (406)
T 2gek_A 281 RSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLV----------PVDDADGMAAALIGILED- 349 (406)
T ss_dssp HHSSEEEECCCSCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTTTSSEEC----------CTTCHHHHHHHHHHHHHC-
T ss_pred HHCCEEEecCCCCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCCCceEEe----------CCCCHHHHHHHHHHHHcC-
Confidence 99999999996 899999999999999999999999999999999999987 899999999999999998
Q ss_pred CHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 555 GTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 555 ~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
++.+.++++++. .+.|||+.++++|+++|++++...
T Consensus 350 -~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 387 (406)
T 2gek_A 350 -DQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAG 387 (406)
T ss_dssp -HHHHHHHHHHHHHHGGGGBHHHHHHHHHHHHHHHCCTT
T ss_pred -HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 666677766653 348999999999999999998554
No 12
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=100.00 E-value=1.5e-38 Score=335.89 Aligned_cols=362 Identities=16% Similarity=0.158 Sum_probs=257.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++..+.| .||.+.++..|+++|+++||+|+++++..... ..+|+++
T Consensus 1 MkIl~i~~~~~~---~gG~~~~~~~l~~~L~~~G~~V~v~~~~~~~~--------------------------~~~~~~v 51 (374)
T 2iw1_A 1 MIVAFCLYKYFP---FGGLQRDFMRIASTVAARGHHVRVYTQSWEGD--------------------------CPKAFEL 51 (374)
T ss_dssp -CEEEECSEECT---TCHHHHHHHHHHHHHHHTTCCEEEEESEECSC--------------------------CCTTCEE
T ss_pred CeEEEEEeecCC---CcchhhHHHHHHHHHHhCCCeEEEEecCCCCC--------------------------CCCCcEE
Confidence 899999998777 59999999999999999999999999763210 0135555
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.++.+.+ .+..++..+...+.+.++.. +|| |||+|.+..++..
T Consensus 52 ~~~~~~~~-----------------------~~~~~~~~~~~~l~~~i~~~------------~~D-vv~~~~~~~~~~~ 95 (374)
T 2iw1_A 52 IQVPVKSH-----------------------TNHGRNAEYYAWVQNHLKEH------------PAD-RVVGFNKMPGLDV 95 (374)
T ss_dssp EECCCCCS-----------------------SHHHHHHHHHHHHHHHHHHS------------CCS-EEEESSCCTTCSE
T ss_pred EEEccCcc-----------------------cchhhHHHHHHHHHHHHhcc------------CCC-EEEEecCCCCcee
Confidence 55432211 11122333444444444443 699 8999875433211
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHH--hcCEEE
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGIL--ESDMVL 322 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~--~ad~vi 322 (612)
.+... ...++.+.+.|+... .... .......+.+..+. .+|.++
T Consensus 96 ~~~~~-------~~~~~~~~~~~~~~~----------------~~~~-----------~~~~~~~~~~~~~~~~~~d~ii 141 (374)
T 2iw1_A 96 YFAAD-------VCYAEKVAQEKGFLY----------------RLTS-----------RYRHYAAFERATFEQGKSTKLM 141 (374)
T ss_dssp EECCS-------CCHHHHHHHHCCHHH----------------HTSH-----------HHHHHHHHHHHHHSTTCCCEEE
T ss_pred eeccc-------cccceeeeecccchh----------------hhcH-----------HHHHHHHHHHHHhhccCCcEEE
Confidence 00000 011222222232110 0000 00001122233333 699999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~ 402 (612)
++|+..++.+.+ .+|++.+ ++.+||||+|.+.|.+... ...+..+++++|++. +
T Consensus 142 ~~s~~~~~~~~~--~~~~~~~------~~~vi~ngv~~~~~~~~~~----------------~~~~~~~~~~~~~~~--~ 195 (374)
T 2iw1_A 142 MLTDKQIADFQK--HYQTEPE------RFQILPPGIYPDRKYSEQI----------------PNSREIYRQKNGIKE--Q 195 (374)
T ss_dssp ESCHHHHHHHHH--HHCCCGG------GEEECCCCCCGGGSGGGSC----------------TTHHHHHHHHTTCCT--T
T ss_pred EcCHHHHHHHHH--HhCCChh------heEEecCCcCHHhcCcccc----------------hhHHHHHHHHhCCCC--C
Confidence 999999999875 2566544 8999999999988866431 122567889999874 4
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhccc---CCcEEEEEeCCchhHHHHHHHHHHHCC--CceEEEeccChHHHHHHHHh
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK---ENVQIIVLGTGKKPMEKQLEQLEILYP--EKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~---~~~~lvivG~g~~~~~~~l~~l~~~~~--~~i~~~~~~~~~~~~~~l~~ 477 (612)
.++|+|+||+.++||++.+++|+..+.+ ++++|+|+|.|.. +.++++..+++ .++.+.+. .+.+..+|+.
T Consensus 196 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~---~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~ 270 (374)
T 2iw1_A 196 QNLLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKP---RKFEALAEKLGVRSNVHFFSG--RNDVSELMAA 270 (374)
T ss_dssp CEEEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCC---HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHH
T ss_pred CeEEEEeccchhhcCHHHHHHHHHHhHhccCCceEEEEEcCCCH---HHHHHHHHHcCCCCcEEECCC--cccHHHHHHh
Confidence 5899999999999999999999999965 4899999999873 45566655554 45776664 3446679999
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCC-CCCHHHHHHHHHHHHHhhCH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVD-PVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~-~~d~~~la~~l~~ll~~~~~ 556 (612)
||++|+||.+|+||++++|||+||+|||+++.||..|++.++.+|+++ + +.|+++++++|.+++++ +
T Consensus 271 ad~~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~----------~~~~~~~~l~~~i~~l~~~--~ 338 (374)
T 2iw1_A 271 ADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVI----------AEPFSQEQLNEVLRKALTQ--S 338 (374)
T ss_dssp CSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEE----------CSSCCHHHHHHHHHHHHHC--H
T ss_pred cCEEEeccccCCcccHHHHHHHCCCCEEEecCCCchhhhccCCceEEe----------CCCCCHHHHHHHHHHHHcC--h
Confidence 999999999999999999999999999999999999999999999987 6 88999999999999997 7
Q ss_pred HHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHH
Q 007224 557 QALAEMMKNGM--AQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 557 ~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+.+.++++++. .+.++|+..++++.++++..+
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 372 (374)
T 2iw1_A 339 PLRMAWAENARHYADTQDLYSLPEKAADIITGGL 372 (374)
T ss_dssp HHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhh
Confidence 77777777763 467899999999999998654
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=100.00 E-value=2.4e-37 Score=332.20 Aligned_cols=357 Identities=15% Similarity=0.135 Sum_probs=256.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++|+..+ |. .||+++++..|+++|+++ |+|++++........ ......
T Consensus 1 MkI~~v~~~~-p~--~gG~~~~~~~l~~~L~~~-~~V~v~~~~~~g~~~-------------------------~~~~~~ 51 (413)
T 3oy2_A 1 MKLIIVGAHS-SV--PSGYGRVMRAIVPRISKA-HEVIVFGIHAFGRSV-------------------------HANIEE 51 (413)
T ss_dssp CEEEEEEECT-TC--CSHHHHHHHHHHHHHTTT-SEEEEEEESCCSCCS-------------------------CSSSEE
T ss_pred CeEEEecCCC-CC--CCCHHHHHHHHHHHHHhc-CCeEEEeecCCCccc-------------------------cccccc
Confidence 9999999864 54 799999999999999999 999999976321000 000110
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+ +... ...+. .+.+ ..+ ....+.+.++.. +|| |||+|.|...+..
T Consensus 52 ~--~~~~-~~~~~-------~~~~-------~~~-----~~~~l~~~l~~~------------~~D-iv~~~~~~~~~~~ 96 (413)
T 3oy2_A 52 F--DAQT-AEHVR-------GLNE-------QGF-----YYSGLSEFIDVH------------KPD-IVMIYNDPIVIGN 96 (413)
T ss_dssp E--EHHH-HHHHT-------TCCS-------TTC-----CHHHHHHHHHHH------------CCS-EEEEEECHHHHHH
T ss_pred C--Cccc-ccccc-------cccc-------ccc-----hHHHHHHHHHhc------------CCC-EEEEcchHHHHHH
Confidence 0 0000 00000 0100 000 011122233332 699 9999965554433
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcC--EEE
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESD--MVL 322 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad--~vi 322 (612)
.+.+ ..+ .....+++...|+..... + ..++..+..+| .++
T Consensus 97 ~~~~-~~~---~~~~~~~~~~~~~~~~~~--------------------------------~--~~~~~~~~~~~~~~ii 138 (413)
T 3oy2_A 97 YLLA-MGK---CSHRTKIVLYVDLVSKNI--------------------------------R--ENLWWIFSHPKVVGVM 138 (413)
T ss_dssp HHHH-GGG---CCSCCEEEEEECCCSBSC--------------------------------C--GGGGGGGGCTTEEEEE
T ss_pred HHHH-hcc---CCCCCceeeeccccchhh--------------------------------H--HHHHHHHhccCCceEE
Confidence 3333 221 001345666666432100 0 01234467878 999
Q ss_pred ecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCC
Q 007224 323 TVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRN 402 (612)
Q Consensus 323 ~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~ 402 (612)
++|+..++.+.+ +|.+ . ++.+||||+|.+.|. ..+++++++.+++
T Consensus 139 ~~S~~~~~~~~~---~~~~-~------~~~vi~ngvd~~~~~-------------------------~~~~~~~~~~~~~ 183 (413)
T 3oy2_A 139 AMSKCWISDICN---YGCK-V------PINIVSHFVDTKTIY-------------------------DARKLVGLSEYND 183 (413)
T ss_dssp ESSTHHHHHHHH---TTCC-S------CEEECCCCCCCCCCT-------------------------THHHHTTCGGGTT
T ss_pred EcCHHHHHHHHH---cCCC-C------ceEEeCCCCCHHHHH-------------------------HHHHhcCCCcccC
Confidence 999999999986 5542 2 899999999988772 1356777775446
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchh----HHHHHHHHHHHCC--Cc-------eEEEeccC
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKP----MEKQLEQLEILYP--EK-------ARGVAKFN 467 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~----~~~~l~~l~~~~~--~~-------i~~~~~~~ 467 (612)
.++|+|+||+.++||++.+++|+.++.+ ++++|+|+|.|+.. +++.++++..+++ ++ +...+..+
T Consensus 184 ~~~il~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g~~~ 263 (413)
T 3oy2_A 184 DVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLT 263 (413)
T ss_dssp SEEEECCSCSSGGGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECSCCC
T ss_pred ceEEEEcCCCchhcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccCcCC
Confidence 7899999999999999999999999865 78999999998743 4477778777665 22 44445567
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCce---------------EE--Eeccccc
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFT---------------GF--QMGSFSV 530 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~---------------G~--l~~~~~~ 530 (612)
.+.+..+|+.||++|+||.+|+||++++|||+||+|||+|+.||+.|++.++.+ |+ ++
T Consensus 264 ~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~----- 338 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIE----- 338 (413)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEECTTTCSSCCEE-----
T ss_pred HHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCCCEEEcCCCChHHHHccCcccccccccccccccccCcceee-----
Confidence 888889999999999999999999999999999999999999999999999887 88 87
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH---HhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 531 DCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM---AQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 531 ~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~---~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
++.|+++++++| +++++ ++.+.++++++. .+.|||+.++++|+++|++++...
T Consensus 339 -----~~~d~~~la~~i-~l~~~--~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~~~ 394 (413)
T 3oy2_A 339 -----GIIDVDDLVEAF-TFFKD--EKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLRVE 394 (413)
T ss_dssp -----EECCHHHHHHHH-HHTTS--HHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHTC--
T ss_pred -----CCCCHHHHHHHH-HHhcC--HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhc
Confidence 889999999999 99998 667777777664 478999999999999999998543
No 14
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=100.00 E-value=1.7e-37 Score=325.10 Aligned_cols=317 Identities=15% Similarity=0.108 Sum_probs=245.8
Q ss_pred CCCceEEEEecc--------ccCc--cccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeE
Q 007224 82 GVGLNILFVGTE--------VAPW--SKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEK 151 (612)
Q Consensus 82 ~~~MkIl~v~~~--------~~P~--~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (612)
|++|||++|+.. +.|+ ...||.+.++..|+++|+++||+|+++++.......
T Consensus 1 M~~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~~~~~~------------------ 62 (342)
T 2iuy_A 1 MRPLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPGSPAGR------------------ 62 (342)
T ss_dssp --CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTTSCCCS------------------
T ss_pred CCccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCCCCCCC------------------
Confidence 567999999998 4221 246999999999999999999999999987432111
Q ss_pred EEEEEeeecCceEEEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcE
Q 007224 152 VRFFHCHKRGVDRVFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDV 231 (612)
Q Consensus 152 ~~~~~~~~~gv~~~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDv 231 (612)
++++++ ..+ ... .+.+.++.. +||
T Consensus 63 --------~~~~~~--~~~--------------------------~~~-------~l~~~l~~~------------~~D- 86 (342)
T 2iuy_A 63 --------PGLTVV--PAG--------------------------EPE-------EIERWLRTA------------DVD- 86 (342)
T ss_dssp --------TTEEEC--SCC--------------------------SHH-------HHHHHHHHC------------CCS-
T ss_pred --------Ccceec--cCC--------------------------cHH-------HHHHHHHhc------------CCC-
Confidence 122211 000 000 222333332 699
Q ss_pred EEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHH
Q 007224 232 VFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWM 311 (612)
Q Consensus 232 vih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (612)
|||+|.+...+.. . ...++| ++++|+..... .
T Consensus 87 vi~~~~~~~~~~~---~-------~~~~~p-v~~~h~~~~~~--------------------------------~----- 118 (342)
T 2iuy_A 87 VVHDHSGGVIGPA---G-------LPPGTA-FISSHHFTTRP--------------------------------V----- 118 (342)
T ss_dssp EEEECSSSSSCST---T-------CCTTCE-EEEEECSSSBC--------------------------------S-----
T ss_pred EEEECCchhhHHH---H-------hhcCCC-EEEecCCCCCc--------------------------------c-----
Confidence 9999987654432 1 125889 99999654210 0
Q ss_pred HHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHH
Q 007224 312 KAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEAL 391 (612)
Q Consensus 312 k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l 391 (612)
.+|.++++|+..++.+.+ ..++.+||||+|.+.|.+...
T Consensus 119 -----~~d~ii~~S~~~~~~~~~-------------~~~~~vi~ngvd~~~~~~~~~----------------------- 157 (342)
T 2iuy_A 119 -----NPVGCTYSSRAQRAHCGG-------------GDDAPVIPIPVDPARYRSAAD----------------------- 157 (342)
T ss_dssp -----CCTTEEESCHHHHHHTTC-------------CTTSCBCCCCBCGGGSCCSTT-----------------------
T ss_pred -----cceEEEEcCHHHHHHHhc-------------CCceEEEcCCCChhhcCcccc-----------------------
Confidence 189999999999998873 127899999999988876531
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007224 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~ 471 (612)
.. ++.++|+|+||+.++||++.+++|++++ +++|+|+|+|+ ..+.++++..++++++.+.+..+.+++
T Consensus 158 ----~~---~~~~~i~~vG~~~~~Kg~~~li~a~~~~---~~~l~i~G~g~--~~~~l~~~~~~~~~~v~~~g~~~~~~l 225 (342)
T 2iuy_A 158 ----QV---AKEDFLLFMGRVSPHKGALEAAAFAHAC---GRRLVLAGPAW--EPEYFDEITRRYGSTVEPIGEVGGERR 225 (342)
T ss_dssp ----CC---CCCSCEEEESCCCGGGTHHHHHHHHHHH---TCCEEEESCCC--CHHHHHHHHHHHTTTEEECCCCCHHHH
T ss_pred ----cC---CCCCEEEEEeccccccCHHHHHHHHHhc---CcEEEEEeCcc--cHHHHHHHHHHhCCCEEEeccCCHHHH
Confidence 01 2446899999999999999999999998 89999999987 566777777776677888888888888
Q ss_pred HHHHHhcCEEEeCCC----------CCCCcHHHHHHHHcCCceEEcCCCCcccceec--CceEEEecccccccCCCCCCC
Q 007224 472 HMIIAGADFILIPSR----------FEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE--GFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 472 ~~~l~~adi~l~pS~----------~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~--g~~G~l~~~~~~~~~~v~~~d 539 (612)
..+|+.||++|+||. .|+||++++|||+||+|||+++.||+.|++.+ +.+|+++ ++ |
T Consensus 226 ~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~g~~~----------~~-d 294 (342)
T 2iuy_A 226 LDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVVGYGT----------DF-A 294 (342)
T ss_dssp HHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEECCSSS----------CC-C
T ss_pred HHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCceEEc----------CC-C
Confidence 899999999999999 79999999999999999999999999999999 8999976 88 9
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcC
Q 007224 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG 591 (612)
Q Consensus 540 ~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~~ 591 (612)
+++++++|.++++ .+.+++.+.++|||+.++++|+++|++++...
T Consensus 295 ~~~l~~~i~~l~~-------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~ 339 (342)
T 2iuy_A 295 PDEARRTLAGLPA-------SDEVRRAAVRLWGHVTIAERYVEQYRRLLAGA 339 (342)
T ss_dssp HHHHHHHHHTSCC-------HHHHHHHHHHHHBHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHH-------HHHHHHHHHHhcCHHHHHHHHHHHHHHHHccC
Confidence 9999999999886 33344445689999999999999999998543
No 15
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=100.00 E-value=1.7e-36 Score=333.33 Aligned_cols=445 Identities=17% Similarity=0.171 Sum_probs=291.0
Q ss_pred EEEEeccccCccccccHHHHhhhhHHHHHhC-CCeEEEEeecCCc-ccc---cCCc--cE-------EEE---EEeCCee
Q 007224 87 ILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRYDQ-YKD---AWDT--DV-------VIE---LKVGDKI 149 (612)
Q Consensus 87 Il~v~~~~~P~~~~GG~~~~~~~La~~L~~~-Gh~V~vit~~~~~-~~~---~~~~--~~-------~~~---~~~~~~~ 149 (612)
|--+++|+.- |.||+=+++..-|+.+.+. |-+..+|.|.... ... .... .. .+. .....+-
T Consensus 30 lfE~swEV~N--kVGGIyTVl~tka~~~~~~~gd~y~~iGP~~~~~~~~e~e~~~~~~~~~~~~~~~~~~~~~~~~~~~G 107 (725)
T 3nb0_A 30 LFETATEVAN--RVGGIYSVLKSKAPITVAQYKDHYHLIGPLNKATYQNEVDILDWKKPEAFSDEMRPVQHALQTMESRG 107 (725)
T ss_dssp EEEEETTTTS--CSSHHHHHHHHHHHHHHHHHGGGEEEEEECCTTTHHHHEEECCSSSGGGSCSTTHHHHHHHHHHHTTT
T ss_pred EEeeehhhhc--ccCCeEEEEecchhHHHHHhCCeEEEECCCCCCcCCcceeecCCCCchhhcchhHHHHHHHHHHHHCC
Confidence 3345666544 7999999999988887754 8899999985221 110 0000 00 000 0000111
Q ss_pred eEEEEEEeeecCceEEEE-eChhhhhh------hhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCC
Q 007224 150 EKVRFFHCHKRGVDRVFV-DHPWFLAK------VVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKY 222 (612)
Q Consensus 150 ~~~~~~~~~~~gv~~~~l-~~~~~~~~------~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 222 (612)
-.+++.+..++|-+++.+ |...++.+ -.|...+ +-.+..+. +-+...+|.+++.++++.+..++
T Consensus 108 ~~v~~GrW~i~G~P~viL~d~~~~~~~~~~~~~~lw~~~~--i~s~~~yg-~~dd~~~F~y~~~avl~~l~~~~------ 178 (725)
T 3nb0_A 108 VHFVYGRWLIEGAPKVILFDLDSVRGYSNEWKGDLWSLVG--IPSPENDF-ETNDAILLGYTVAWFLGEVAHLD------ 178 (725)
T ss_dssp CCEEEEEESSTTCCEEEEECSGGGGGGHHHHHHHHHHHHC--CCCCSSCH-HHHHHHHHHHHHHHHHHHHHHHC------
T ss_pred CeEEEEEEecCCCceEEEEeChHHHHHHHHHHHHHHHHhC--cCCCCccc-chhHHHHHHHHHHHHHHHHHhcC------
Confidence 246677778889888766 43333321 1454333 21222222 44577899999999999887664
Q ss_pred CCCCCCCcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcc------cccCCcc-cccccCCCccccccccc
Q 007224 223 FSGPYGEDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAY------QGRFAFE-DFGLLNLPAQFKSSFDF 295 (612)
Q Consensus 223 ~~~~~~pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~------~~~~~~~-~~~~~~l~~~~~~~~~~ 295 (612)
.+.|| |+|+|||++++++.+++..+ .++++|||+|++.+ |+.++.. .+..++++.....
T Consensus 179 ---~~~pd-IiH~HDW~tg~~~~~Lk~~~------~~i~tVfTiH~telGR~lagqg~~~~y~~L~~~~~d~ea~~---- 244 (725)
T 3nb0_A 179 ---SQHAI-VAHFHEWLAGVALPLCRKRR------IDVVTIFTTHATLLGRYLCASGSFDFYNCLESVDVDHEAGR---- 244 (725)
T ss_dssp ---CSEEE-EEEEESGGGCTHHHHHHHTT------CSCEEEEEESSCHHHHHHTSSSCSCHHHHGGGCCHHHHHHH----
T ss_pred ---CCCCc-EEEeCchhhhHHHHHHHHhC------CCCCEEEEEecchhhhhhhhcCCCchhhhhhhcCCChhhhh----
Confidence 23589 99999999999999999764 69999999999853 3433211 1222222221100
Q ss_pred ccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCcccccccc
Q 007224 296 IDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKY 375 (612)
Q Consensus 296 ~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~ 375 (612)
.-.....++++.++..||+|+|||+.+++++.. .++.+.+ .+||||+|++.|+|...
T Consensus 245 ------~~i~~~~~~EKaga~~AD~ITTVS~~yA~Ei~~--Ll~r~~d--------~iIpNGID~~~f~p~~~------- 301 (725)
T 3nb0_A 245 ------FGIYHRYCIERAAAHSADVFTTVSQITAFEAEH--LLKRKPD--------GILPNGLNVIKFQAFHE------- 301 (725)
T ss_dssp ------TTCHHHHHHHHHHHHHSSEEEESSHHHHHHHHH--HTSSCCS--------EECCCCBCCCCCSSTTH-------
T ss_pred ------hchhHHHHHHHHHHHhCCEEEECCHHHHHHHHH--HhcCCCC--------EEEcCCccccccCcchh-------
Confidence 001135688999999999999999999999985 2344332 33999999999998521
Q ss_pred CcchhhcchHHHHHHHHHHh------CCCCC-CCCcEEEEEcCcc-cccCHHHHHHHHHhccc---------CCcEEEEE
Q 007224 376 DASTVMDAKPLLKEALQAEV------GLPVD-RNIPVIGFIGRLE-EQKGSDILAAAIPHFIK---------ENVQIIVL 438 (612)
Q Consensus 376 ~~~~~~~~~~~~k~~l~~~~------gl~~~-~~~~~il~iGrl~-~~Kg~d~ll~a~~~l~~---------~~~~lviv 438 (612)
....+...|..+++.+ |++.+ ++.++|..+||++ .+||+|.+++|+.++.. .-+-|+|+
T Consensus 302 ----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl~ieAl~~L~~~l~~~~~~~~vvafii~ 377 (725)
T 3nb0_A 302 ----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADMFIEALARLNYRLKVSGSKKTVVAFIVM 377 (725)
T ss_dssp ----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEEEC
T ss_pred ----hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHHHHHHHHHHHHHHhhccCCCcEEEEEEe
Confidence 1123445566665554 45544 3345566689999 79999999999999863 13667777
Q ss_pred eCCchhH----------HHHH-----------------------------------------------------------
Q 007224 439 GTGKKPM----------EKQL----------------------------------------------------------- 449 (612)
Q Consensus 439 G~g~~~~----------~~~l----------------------------------------------------------- 449 (612)
..+...+ .+++
T Consensus 378 p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~lkr~~~~~~~~~~ 457 (725)
T 3nb0_A 378 PAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSSDKVMLKRRILALRRPEG 457 (725)
T ss_dssp CCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHHHHHHHHHHHHHHCCCTT
T ss_pred CCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChHHHHHHHHHHHhhccCCC
Confidence 7653210 0000
Q ss_pred ----------------------HHHHHHC----CCceEEEeccC-hH------HHHHHHHhcCEEEeCCCCCCCcHHHHH
Q 007224 450 ----------------------EQLEILY----PEKARGVAKFN-IP------LAHMIIAGADFILIPSRFEPCGLIQLH 496 (612)
Q Consensus 450 ----------------------~~l~~~~----~~~i~~~~~~~-~~------~~~~~l~~adi~l~pS~~E~~gl~~lE 496 (612)
+++.... ..+++++..|. +. ....+|++||++|+||.+|+||++++|
T Consensus 458 ~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~advfV~PS~~EgfGl~~LE 537 (725)
T 3nb0_A 458 QLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCHLGVFPSYYEPWGYTPAE 537 (725)
T ss_dssp CCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSEEECCCSSBSSCHHHHH
T ss_pred CCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhceEEEeccccCCCCHHHHH
Confidence 0000000 01244554442 22 356799999999999999999999999
Q ss_pred HHHcCCceEEcCCCCcccceecC-------ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh---hCHHHHHHHHHHH
Q 007224 497 AMRYGTVPIVASTGGLVDTVEEG-------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT---YGTQALAEMMKNG 566 (612)
Q Consensus 497 Ama~G~PvI~s~~gg~~e~v~~g-------~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~---~~~~~~~~~~~~~ 566 (612)
||+||+|||+|++||+.|+|.++ .+|+++.+. ++.|+++++++|.+++.. ..+..+.+|++++
T Consensus 538 AmA~G~PvI~s~~gG~~d~V~dg~~~~~~~~tG~lV~~r-------d~~d~ee~aeaLa~aL~~f~~~d~~~r~~mr~~a 610 (725)
T 3nb0_A 538 CTVMGVPSITTNVSGFGSYMEDLIETNQAKDYGIYIVDR-------RFKAPDESVEQLVDYMEEFVKKTRRQRINQRNAT 610 (725)
T ss_dssp HHHTTCCEEEETTBHHHHHHHTTSCHHHHHHTTEEEECC-------SSSCHHHHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred HHHcCCCEEEeCCCChhhhhhccccccCCCCceEEEeCC-------CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999999876 369876111 355777777777776653 1355566676666
Q ss_pred --HHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 567 --MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 567 --~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
+++.|||+.++++|+++|+.++..
T Consensus 611 r~~A~~FSWe~iA~~Yl~~Ye~aL~~ 636 (725)
T 3nb0_A 611 EALSDLLDWKRMGLEYVKARQLALRR 636 (725)
T ss_dssp HHGGGGGBHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhh
Confidence 468999999999999999998753
No 16
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=100.00 E-value=6.1e-33 Score=298.86 Aligned_cols=355 Identities=12% Similarity=0.096 Sum_probs=228.5
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeec
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKR 160 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (612)
...+|||++++..|.|....||.. .+..|+.+|+++||+|+|+++......... ....
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~-~v~~la~~L~~~GheV~Vvt~~~~~~~~~~---------------------~~~~ 100 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGIS-TALKLFEQFDNKKFKKRIILTDATPNPKDL---------------------QSFK 100 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHH-HHHHHHTTSCTTTCEEEEEESSCCCCHHHH---------------------GGGT
T ss_pred CCCCceEEEEeCCCCccccccHHH-HHHHHHHHHHHcCCceEEEEecCCCChHHH---------------------Hhhh
Confidence 356899999999988842346664 688999999999999999998732100000 0000
Q ss_pred CceEEEEeChh-hhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCc
Q 007224 161 GVDRVFVDHPW-FLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWH 239 (612)
Q Consensus 161 gv~~~~l~~~~-~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~ 239 (612)
+.....+.... +..+ +.. +.. . ....+.. .++| |||+|.|.
T Consensus 101 ~~~~~~~~~~~~~~~~---------i~~------~~~----------~---~~~~~~~---------~~~D-vv~a~~~~ 142 (413)
T 2x0d_A 101 SFKYVMPEEDKDFALQ---------IVP------FND----------R---YNRTIPV---------AKHD-IFIATAWW 142 (413)
T ss_dssp TSEECCTTCCCCCSEE---------EEE------CSC----------C---TTCCEEE---------CTTE-EEEECSHH
T ss_pred ccceeeccCCccccce---------eee------ccc----------c---ccccccC---------CCCC-EEEEehHH
Confidence 10000000000 0000 000 000 0 0000000 1589 88999887
Q ss_pred cchHHHHHH----HhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHH
Q 007224 240 TSLIPCYLK----TMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGI 315 (612)
Q Consensus 240 ~~~~~~~l~----~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 315 (612)
++.....+. ..+. ....+.++.+|+.... .++ ......+.+..+
T Consensus 143 ~~~~~~~~~~~~~~~~~----~~~~~~~~~v~~~~~~-~~~---------------------------~~~~~~~~~~~~ 190 (413)
T 2x0d_A 143 TAYAAQRIVSWQSDTYG----IPPNKILYIIQDFEPG-FYQ---------------------------WSSQYVLAESTY 190 (413)
T ss_dssp HHHHHHHHHHHHHHHHT----CCCCCEEEEECSCGGG-GSC---------------------------SSHHHHHHHHTT
T ss_pred HHHHHHHhhhhhhhhcc----cccCcEEEEEeechhh-cCc---------------------------cChHHHHHHHHh
Confidence 766554442 1110 0245777777753220 000 000112223344
Q ss_pred HhcC--EEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHH
Q 007224 316 LESD--MVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 316 ~~ad--~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 393 (612)
..++ .++++|+..++.+.+ +|.+.. ++.+|+||+|.+.|.+..
T Consensus 191 ~~~~~~~vi~~S~~~~~~l~~---~g~~~~------~~~~i~~g~d~~~~~~~~-------------------------- 235 (413)
T 2x0d_A 191 KYRGPQIAVFNSELLKQYFNN---KGYNFT------DEYFFQPKINTTLKNYIN-------------------------- 235 (413)
T ss_dssp SCCSCEEEEEESHHHHHHHHH---HTCCCS------EEEEECCCCCHHHHTTTT--------------------------
T ss_pred ccCCceEEEEcCHHHHHHHHH---cCCCCC------ceEEeCCCcCchhhcccc--------------------------
Confidence 4454 589999999999986 444322 688999999977554321
Q ss_pred HhCCCCCCCCcEEEEEcCc-ccccCHHHHHHHHHhccc--C---CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccC
Q 007224 394 EVGLPVDRNIPVIGFIGRL-EEQKGSDILAAAIPHFIK--E---NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 394 ~~gl~~~~~~~~il~iGrl-~~~Kg~d~ll~a~~~l~~--~---~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~ 467 (612)
.+ .++.+.|+++||+ .+.||++.+++|+..+.+ + +++|+++|+|... .++ ....++.+.+..+
T Consensus 236 -~~---~~~~~~il~~gr~~~~~Kg~~~li~A~~~l~~~~~~~~~~~l~ivG~~~~~-----~~l--~~~~~v~f~G~~~ 304 (413)
T 2x0d_A 236 -DK---RQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVGEKHKD-----IAL--GKGIHLNSLGKLT 304 (413)
T ss_dssp -SC---CCCCSEEEEEECTTCGGGCHHHHHHHHHHHHHHCTTGGGCEEEEEESCCCC-----EEE--ETTEEEEEEESCC
T ss_pred -cc---cCCCCEEEEEecCchhccCHHHHHHHHHHHHHhCCCCCceEEEEEcCCchh-----hhc--CCcCcEEEcCCCC
Confidence 01 1234689999996 689999999999999865 4 3899999998742 011 1223577777778
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHH
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
.+++..+|+.||++++||..|+||++++||||||+|||++ .+|..|++.++.+|+++ ++.|+++++++|
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~~~~G~lv----------~~~d~~~la~ai 373 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSL----------EQLNPENIAETL 373 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGTBTTEEEE----------SSCSHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCCcEEEe-CCCcchhhhcCCCEEEe----------CCCCHHHHHHHH
Confidence 8889999999999999999999999999999999999995 56778999999999987 999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 007224 548 RRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 548 ~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
.++++++. .+.+ .....++.|||+..+++ .++|+++.
T Consensus 374 ~~ll~~~~--~~~~-~~~~~~~~~~W~~~~~~-~~~~~~l~ 410 (413)
T 2x0d_A 374 VELCMSFN--NRDV-DKKESSNMMFYINEFNE-FSFIKEIE 410 (413)
T ss_dssp HHHHHHTC----------CCBSCGGGCCCC----TTHHHHH
T ss_pred HHHHcCHH--HHHH-hHHHHHHhCCHHHHHHH-HHHHHHHH
Confidence 99999843 2222 11123468999999887 77777765
No 17
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.97 E-value=4.1e-29 Score=263.22 Aligned_cols=337 Identities=15% Similarity=0.015 Sum_probs=226.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccccCCccEEEEEEeCCeeeEEEEEEeeecCceE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDR 164 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~ 164 (612)
|||++++. + .||....+..|+++|+++||+|+++++......+.. ...|+++
T Consensus 7 mkIl~~~~---~---~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~----------------------~~~g~~~ 58 (364)
T 1f0k_A 7 KRLMVMAG---G---TGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLV----------------------PKHGIEI 58 (364)
T ss_dssp CEEEEECC---S---SHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHG----------------------GGGTCEE
T ss_pred cEEEEEeC---C---CccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhc----------------------cccCCce
Confidence 89999973 2 578888899999999999999999998642111100 0124554
Q ss_pred EEEeChhhhhhhhcCCCCCcccCCCCCCCCcchhHHHHHHHHHHHHhhHhhccCCCCCCCCCCCCcEEEEecCCccchHH
Q 007224 165 VFVDHPWFLAKVVWGKTQSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTSLIP 244 (612)
Q Consensus 165 ~~l~~~~~~~~~~w~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~ 244 (612)
+.+..+.+... .... ......++......+.+.++.. +|| +||+|.....+..
T Consensus 59 ~~~~~~~~~~~--------~~~~------~~~~~~~~~~~~~~l~~~l~~~------------~pD-vv~~~~~~~~~~~ 111 (364)
T 1f0k_A 59 DFIRISGLRGK--------GIKA------LIAAPLRIFNAWRQARAIMKAY------------KPD-VVLGMGGYVSGPG 111 (364)
T ss_dssp EECCCCCCTTC--------CHHH------HHTCHHHHHHHHHHHHHHHHHH------------CCS-EEEECSSTTHHHH
T ss_pred EEecCCccCcC--------ccHH------HHHHHHHHHHHHHHHHHHHHhc------------CCC-EEEEeCCcCchHH
Confidence 44432211000 0000 0001112222233344444443 699 8899865433333
Q ss_pred HHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 245 CYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 245 ~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
..+... .++|++++.|+... + ...+...+.+|.+++.
T Consensus 112 ~~~~~~-------~~~p~v~~~~~~~~-~-----------------------------------~~~~~~~~~~d~v~~~ 148 (364)
T 1f0k_A 112 GLAAWS-------LGIPVVLHEQNGIA-G-----------------------------------LTNKWLAKIATKVMQA 148 (364)
T ss_dssp HHHHHH-------TTCCEEEEECSSSC-C-----------------------------------HHHHHHTTTCSEEEES
T ss_pred HHHHHH-------cCCCEEEEecCCCC-c-----------------------------------HHHHHHHHhCCEEEec
Confidence 333333 47899999985321 0 0112335578999988
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCc
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIP 404 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~ 404 (612)
++.. .+ ++.+|+||+|...+.+.. .+++++++. +.+
T Consensus 149 ~~~~-----------~~--------~~~~i~n~v~~~~~~~~~-----------------------~~~~~~~~~--~~~ 184 (364)
T 1f0k_A 149 FPGA-----------FP--------NAEVVGNPVRTDVLALPL-----------------------PQQRLAGRE--GPV 184 (364)
T ss_dssp STTS-----------SS--------SCEECCCCCCHHHHTSCC-----------------------HHHHHTTCC--SSE
T ss_pred Chhh-----------cC--------CceEeCCccchhhcccch-----------------------hhhhcccCC--CCc
Confidence 7643 11 577999999987665431 134556643 335
Q ss_pred -EEEEEcCcccccCHHHHHHHHHhcccCCcE-EEEEeCCchhHHHHHHHHHHHCC-CceEEEeccChHHHHHHHHhcCEE
Q 007224 405 -VIGFIGRLEEQKGSDILAAAIPHFIKENVQ-IIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 405 -~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~-lvivG~g~~~~~~~l~~l~~~~~-~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
++++.|++.++||.+.+++|+.++.+ +++ ++++|+++ .+.++++..+++ .++.+.+.. +.+..+|+.||++
T Consensus 185 ~il~~~g~~~~~k~~~~li~a~~~l~~-~~~~l~i~G~~~---~~~l~~~~~~~~~~~v~~~g~~--~~~~~~~~~ad~~ 258 (364)
T 1f0k_A 185 RVLVVGGSQGARILNQTMPQVAAKLGD-SVTIWHQSGKGS---QQSVEQAYAEAGQPQHKVTEFI--DDMAAAYAWADVV 258 (364)
T ss_dssp EEEEECTTTCCHHHHHHHHHHHHHHGG-GEEEEEECCTTC---HHHHHHHHHHTTCTTSEEESCC--SCHHHHHHHCSEE
T ss_pred EEEEEcCchHhHHHHHHHHHHHHHhcC-CcEEEEEcCCch---HHHHHHHHhhcCCCceEEecch--hhHHHHHHhCCEE
Confidence 45556799999999999999999966 788 56788887 256666666655 356666544 4456799999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc--------cceecCceEEEecccccccCCCCCCC--HHHHHHHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV--------DTVEEGFTGFQMGSFSVDCEAVDPVD--VAAVSTTVRRAL 551 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~--------e~v~~g~~G~l~~~~~~~~~~v~~~d--~~~la~~l~~ll 551 (612)
|+||. |++++|||+||+|||+++.+|.. +++.++ .|+++ ++.| +++++++|.++
T Consensus 259 v~~sg----~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~g-~g~~~----------~~~d~~~~~la~~i~~l- 322 (364)
T 1f0k_A 259 VCRSG----ALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAG-AAKII----------EQPQLSVDAVANTLAGW- 322 (364)
T ss_dssp EECCC----HHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHTT-SEEEC----------CGGGCCHHHHHHHHHTC-
T ss_pred EECCc----hHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhCC-cEEEe----------ccccCCHHHHHHHHHhc-
Confidence 99993 99999999999999999999875 355555 59987 8878 99999999999
Q ss_pred HhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHHH
Q 007224 552 ATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l~ 588 (612)
+ ++.+.+|++++. .+.|+|+.++++|+++|++..
T Consensus 323 -~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 358 (364)
T 1f0k_A 323 -S--RETLLTMAERARAASIPDATERVANEVSRVARALE 358 (364)
T ss_dssp -C--HHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHTTC-
T ss_pred -C--HHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHH
Confidence 5 677777777764 468999999999999998653
No 18
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=99.97 E-value=7.8e-30 Score=274.17 Aligned_cols=203 Identities=15% Similarity=0.112 Sum_probs=163.6
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHH
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..+++..++.+|.++++|+..++.+.+ ++ ++.+||||+|.+.|.+....
T Consensus 169 ~~~~~~~~~~ad~vi~~S~~~~~~~~~---~~----------~i~vipngvd~~~f~~~~~~------------------ 217 (406)
T 2hy7_A 169 EREFDRVAPTLDVIALVSPAMAAEVVS---RD----------NVFHVGHGVDHNLDQLGDPS------------------ 217 (406)
T ss_dssp HHHHHHHGGGCSEEEESCGGGGGGCSC---ST----------TEEECCCCBCTTHHHHHCSC------------------
T ss_pred HHHHHHHHHhCCEEEEcCHHHHHHHHh---cC----------CEEEEcCCcChHhcCccccc------------------
Confidence 356677889999999999999888764 22 68999999998877543110
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccC
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFN 467 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~ 467 (612)
+ .++.++|+|+||+.++||+ ++++.+. .++++|+|+|+|+ ++++ ...+++.+.+..+
T Consensus 218 ----------~-~~~~~~i~~vGrl~~~Kg~---~~~l~~~-~~~~~l~ivG~g~------~~~~--~l~~~V~f~G~~~ 274 (406)
T 2hy7_A 218 ----------P-YAEGIHAVAVGSMLFDPEF---FVVASKA-FPQVTFHVIGSGM------GRHP--GYGDNVIVYGEMK 274 (406)
T ss_dssp ----------S-CCSSEEEEEECCTTBCHHH---HHHHHHH-CTTEEEEEESCSS------CCCT--TCCTTEEEECCCC
T ss_pred ----------c-cCCCcEEEEEeccccccCH---HHHHHHh-CCCeEEEEEeCch------HHhc--CCCCCEEEcCCCC
Confidence 1 1233799999999999998 4444332 3789999999886 1111 1345688888888
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCcHHHHHHH-------HcCCceEEcCCCCcccceecCceEEE-ecccccccCCCCCCC
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCGLIQLHAM-------RYGTVPIVASTGGLVDTVEEGFTGFQ-MGSFSVDCEAVDPVD 539 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~gl~~lEAm-------a~G~PvI~s~~gg~~e~v~~g~~G~l-~~~~~~~~~~v~~~d 539 (612)
.+++..+|+.||++|+||..|+||++++||| +||+|||+|+. +.++.+|++ + +++|
T Consensus 275 ~~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~------v~~~~~G~l~v----------~~~d 338 (406)
T 2hy7_A 275 HAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA------VVGPYKSRFGY----------TPGN 338 (406)
T ss_dssp HHHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG------GTCSCSSEEEE----------CTTC
T ss_pred HHHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh------cccCcceEEEe----------CCCC
Confidence 8888899999999999999999999999999 99999999987 667889998 7 9999
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHH--HHHHHH
Q 007224 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEET--LLNLEV 589 (612)
Q Consensus 540 ~~~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~--y~~l~~ 589 (612)
+++++++|.++++++. . ...+.|||+.++++++++ |+++..
T Consensus 339 ~~~la~ai~~ll~~~~--------~-~~~~~~sw~~~a~~~~~~~~y~~~~~ 381 (406)
T 2hy7_A 339 ADSVIAAITQALEAPR--------V-RYRQCLNWSDTTDRVLDPRAYPETRL 381 (406)
T ss_dssp HHHHHHHHHHHHHCCC--------C-CCSCCCBHHHHHHHHHCGGGSGGGBS
T ss_pred HHHHHHHHHHHHhCcc--------h-hhhhcCCHHHHHHHHHHhhcccccCc
Confidence 9999999999999854 1 235789999999999999 887664
No 19
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=99.96 E-value=7.2e-28 Score=269.00 Aligned_cols=363 Identities=15% Similarity=0.165 Sum_probs=266.1
Q ss_pred HHHHHHHHHHh-hHhhccCCCCCCCCCC----CCcEEEEecCCccchHHH-HHHHhhcCCCC-----C--CCceEEEEEe
Q 007224 201 FSLLCQAALEA-PRILNLNSNKYFSGPY----GEDVVFVANDWHTSLIPC-YLKTMYKPKGM-----Y--KSAKVVFCIH 267 (612)
Q Consensus 201 ~~~~~~~~~~~-~~~l~~~~~~~~~~~~----~pDvvih~h~~~~~~~~~-~l~~~~~~~~~-----~--~~~~vv~~iH 267 (612)
-.+|+.+.++. ++.+.... +.+ .|| +||+||||+++++. +++..+-..|. + ....++||+|
T Consensus 272 e~ff~~a~lq~ilr~~~~~~-----~~~~~l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~H 345 (796)
T 1l5w_A 272 QYFQCACSVADILRRHHLAG-----RKLHELADYE-VIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNH 345 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-----CCGGGHHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHcC-----CChhhcCCcc-EEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEec
Confidence 36788888875 55432100 001 488 99999999999888 55443211111 0 3678999999
Q ss_pred cCccccc--CCcccccccCCCcccc----------cc-----------cccccCCCCCcCCcchhHHHHHHHhcCEEEec
Q 007224 268 NIAYQGR--FAFEDFGLLNLPAQFK----------SS-----------FDFIDGYNKPVRGRKINWMKAGILESDMVLTV 324 (612)
Q Consensus 268 ~~~~~~~--~~~~~~~~~~l~~~~~----------~~-----------~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~v 324 (612)
++.+++. |+...+..+- |.... .. +. ..+. ......++++.++..|+.|.+|
T Consensus 346 Tl~~egle~wp~~l~~~~l-pr~~~ii~~I~~~f~~~~~~~~~~~~~~~~-~~~i---~~~~~vnMa~lai~~S~~VNgV 420 (796)
T 1l5w_A 346 TLMPEALERWDVKLVKGLL-PRHMQIINEINTRFKTLVEKTWPGDEKVWA-KLAV---VHDKQVHMANLCVVGGFAVNGV 420 (796)
T ss_dssp CCSGGGSCEEEHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHSTTCHHHHH-HHCS---EETTEEEHHHHHHHHSSEEEES
T ss_pred CCcHhhhhcCCHHHHHHHh-HHHHHHHhccCHHHHHHHHHhcCCcHHHHh-hhhc---ccCCcccHHHHHHHhcCccccc
Confidence 9999885 6655442211 11110 00 00 0000 0113578999999999999999
Q ss_pred CHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCcc----CCCCccccccccC----------------cch-----
Q 007224 325 SPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD----------------AST----- 379 (612)
Q Consensus 325 S~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~----~p~~~~~~~~~~~----------------~~~----- 379 (612)
|+.+.+.+... .++ ..- -+.+.++..|.||||...| +|..++.+..+|+ .++
T Consensus 421 S~lH~e~ik~~-~f~-~~~-~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~w~~d~~~l~~l~~~~~d~~~~~ 497 (796)
T 1l5w_A 421 AALHSDLVVKD-LFP-EYH-QLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQ 497 (796)
T ss_dssp SHHHHHHHHHT-TSH-HHH-HHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHH
T ss_pred cHHHHHHHHhH-Hhh-HHH-HhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCcccccCHHHHHHHHhcCCCHHHHH
Confidence 99999999752 232 111 1234589999999999999 7887777777776 443
Q ss_pred -hhcchHHHHHH----HHHHhCCCCCCCCcEEEEEcCcccccCHHH-HHHHHHhccc---------CCcEEEEEeCCchh
Q 007224 380 -VMDAKPLLKEA----LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKP 444 (612)
Q Consensus 380 -~~~~~~~~k~~----l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~-ll~a~~~l~~---------~~~~lvivG~g~~~ 444 (612)
+.+.|..+|.. +++++|++.+++.+.++++.|+.++||+++ ++..+.++.+ .+++|++.|++.+.
T Consensus 498 ~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~ 577 (796)
T 1l5w_A 498 QYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPG 577 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhcCCCCCCCCeEEEEEecCChh
Confidence 44677778888 599999999999999999999999999999 8888887755 47999999999865
Q ss_pred HHHH------HHHHHH------HCCC--ceEEEeccChHHHHHHHHhcCEEEeCCC--CCCCcHHHHHHHHcCCceEEcC
Q 007224 445 MEKQ------LEQLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 445 ~~~~------l~~l~~------~~~~--~i~~~~~~~~~~~~~~l~~adi~l~pS~--~E~~gl~~lEAma~G~PvI~s~ 508 (612)
++.. +.+++. ++++ ++.+...++..+++.++++||++++||+ +|+||+..+-+|.+|+++|++-
T Consensus 578 y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtL 657 (796)
T 1l5w_A 578 YYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALNGALTVGTL 657 (796)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHTTCEEEECS
T ss_pred HHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeeecCc
Confidence 5554 777776 5666 7888889999999999999999999999 8999999999999999999999
Q ss_pred CCCcccceec--CceEEEecccccccCCCCCCCHHHHH---HHHHHHHHhhC-HHHHHHHHHHHHHhcCCcHHHHHHHHH
Q 007224 509 TGGLVDTVEE--GFTGFQMGSFSVDCEAVDPVDVAAVS---TTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEE 582 (612)
Q Consensus 509 ~gg~~e~v~~--g~~G~l~~~~~~~~~~v~~~d~~~la---~~l~~ll~~~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~ 582 (612)
.|...|+.++ ..|||+|| . +++++. .+..+..+-+. .+.++++..+.+...|||... ..|.+
T Consensus 658 DGanvEi~e~vG~~NgF~FG----------~-~~~ev~~l~~~~y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~ 725 (796)
T 1l5w_A 658 DGANVEIAEKVGEENIFIFG----------H-TVEQVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDK-HAFDQ 725 (796)
T ss_dssp CTTHHHHHHHHCGGGSEECS----------C-CHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHHHHTTTTTTCT-TTTHH
T ss_pred CCeeeehhhccCCCcEEEec----------C-CHHHHHHHHHcccCHHHHhhcCHHHHHHHHHHHcCCCCCCcH-HHHHH
Confidence 9999998765 46999994 3 566655 33222222221 236778888888999999886 78999
Q ss_pred HHHHHHH
Q 007224 583 TLLNLEV 589 (612)
Q Consensus 583 ~y~~l~~ 589 (612)
+|++++.
T Consensus 726 Ly~~L~~ 732 (796)
T 1l5w_A 726 MLHSIGK 732 (796)
T ss_dssp HHHHTST
T ss_pred HHHHHhc
Confidence 9999863
No 20
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=99.96 E-value=3.8e-28 Score=271.25 Aligned_cols=374 Identities=14% Similarity=0.122 Sum_probs=268.1
Q ss_pred HHHHHHHHHHh-hHhhccCCCCCCCCCCCCcEEEEecCCccchHHH-HHHHhhcCCCCC-------CCceEEEEEecCcc
Q 007224 201 FSLLCQAALEA-PRILNLNSNKYFSGPYGEDVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAY 271 (612)
Q Consensus 201 ~~~~~~~~~~~-~~~l~~~~~~~~~~~~~pDvvih~h~~~~~~~~~-~l~~~~~~~~~~-------~~~~vv~~iH~~~~ 271 (612)
-.+|+.+.++. ++.+..... .|..--.|| +||+||||+++++. +++..+-..|.- ....++||+|++.+
T Consensus 262 e~ff~~a~lq~ilr~~~~~~~-~l~~l~~p~-viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~ 339 (796)
T 2c4m_A 262 QYFFTSASLQAMIQDHLAHHK-DLSNFAEFH-SVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLT 339 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHSS-CSTTHHHHE-EEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSS
T ss_pred HHHHHHHHHHHHHHHHHHhCC-ChhhcCCCe-EEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchH
Confidence 35788888875 554311000 000000478 99999999999888 554432111110 35689999999999
Q ss_pred ccc--CCccccccc---------CCCcccccccccccC------CCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHc
Q 007224 272 QGR--FAFEDFGLL---------NLPAQFKSSFDFIDG------YNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVS 334 (612)
Q Consensus 272 ~~~--~~~~~~~~~---------~l~~~~~~~~~~~~~------~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~ 334 (612)
++. |+...+..+ +++..+...+....+ ..........++++.++..|+.|.+||+.+.+.+..
T Consensus 340 egle~wp~~l~~~~lpr~~~ii~~I~~~~~~~~~~~~~~~~~~~~~~i~~~~~vnMa~lai~~S~~VNgVS~lHae~ik~ 419 (796)
T 2c4m_A 340 EALEQWDEQIFQQLFWRVWEIIAEIDRRFRLERAADGLDEETINRMAPIQHGTVHMAWIACYAAYSINGVAALHTEIIKA 419 (796)
T ss_dssp TTSCEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHCSEETTEEEHHHHHHHHCSEEEESSHHHHHHHHH
T ss_pred HHhhhCCHHHHHHHhHHHHHHHcCcCHHHHHHHHhcCCcHhhhhcccceeCCcccHHHHHHHhcCceeeccHHHHHHhhh
Confidence 986 665544221 111111110000000 000001135789999999999999999999999985
Q ss_pred cccCCccchhhhhccCeEEeeCCCccCcc----CCCCccccccccC-----------------cch------hhcchHHH
Q 007224 335 GEDKGVELDNIIRKTGIKGIVNGMDVQEW----NPLTDKYIGVKYD-----------------AST------VMDAKPLL 387 (612)
Q Consensus 335 ~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~----~p~~~~~~~~~~~-----------------~~~------~~~~~~~~ 387 (612)
. .++ ..- .+.+.++..|.||||...| +|..++.+...|+ .++ +.+.|..+
T Consensus 420 ~-~f~-~~~-~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~~~~~~l~~~K~~n 496 (796)
T 2c4m_A 420 E-TLA-DWY-ALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDKSVLEELRAIKAAN 496 (796)
T ss_dssp T-TTH-HHH-HHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCHHHHHHHHHHHHHH
T ss_pred h-hhh-hHH-HcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCHHHHHHHHHHHHHH
Confidence 2 233 111 1234589999999999999 7887777777776 444 34677777
Q ss_pred HHH----HHHHhCCCCCCCCcEEEEEcCcccccCHHH-HHHHHHhccc---------CCcEEEEEeCCchhHHHH-----
Q 007224 388 KEA----LQAEVGLPVDRNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK---------ENVQIIVLGTGKKPMEKQ----- 448 (612)
Q Consensus 388 k~~----l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~-ll~a~~~l~~---------~~~~lvivG~g~~~~~~~----- 448 (612)
|.. ++++.|++.+++.+.++++.|+.++||+++ ++..+.++.+ .+++|++.|++.+.++..
T Consensus 497 K~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIk 576 (796)
T 2c4m_A 497 KQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKEDGLTDIPARTVIFGAKAAPGYVRAKAIIK 576 (796)
T ss_dssp HHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHTSCCCSSCCEEEEEECCCCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhhCCCCCCCCeEEEEEecCCHhHHHHHHHHH
Confidence 888 599999999999999999999999999999 8888887753 379999999998665555
Q ss_pred -HHHHHH------HCCC--ceEEEeccChHHHHHHHHhcCEEEeCCC--CCCCcHHHHHHHHcCCceEEcCCCCccccee
Q 007224 449 -LEQLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE 517 (612)
Q Consensus 449 -l~~l~~------~~~~--~i~~~~~~~~~~~~~~l~~adi~l~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~ 517 (612)
+.+++. ++++ ++.+...++..+++.++++||++++||+ +|+||+..+-+|.+|+++|++-.|...|+.+
T Consensus 577 ~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~NGaL~iGtLDGanvEi~e 656 (796)
T 2c4m_A 577 LINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMNGALTLGTMDGANVEIVD 656 (796)
T ss_dssp HHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHTTCEEEEESSTHHHHHHH
T ss_pred HHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCCeEEeccCCeEeehhh
Confidence 777776 6777 8899999999999999999999999999 8999999999999999999999999998876
Q ss_pred c--CceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 518 E--GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 518 ~--g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~-~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+ ..|||+||. ...+++++..+ .+..+-+. .+.++++..+.+...|||... ..|.++|++++.
T Consensus 657 ~vG~~NgF~FG~--------~~~ev~~l~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~-~~y~~Ly~~L~~ 721 (796)
T 2c4m_A 657 SVGEENAYIFGA--------RVEELPALRES-YKPYELYETVPGLKRALDALDNGTLNDNNS-GLFYDLKHSLIH 721 (796)
T ss_dssp HHCGGGSEEESC--------CTTTHHHHHHT-CCHHHHHHHSTTHHHHHHTTTSSSSCCTTC-CHHHHHHHHHHS
T ss_pred hcCCCcEEEecC--------chhhHHHHHHh-hChHHHhhcCHHHHHHHHHHHcCCCCCCCH-HHHHHHHHHHHh
Confidence 5 469999952 23567777665 33333221 135677777778899999987 789999999973
No 21
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=99.96 E-value=3.3e-27 Score=258.05 Aligned_cols=293 Identities=15% Similarity=0.136 Sum_probs=206.7
Q ss_pred CcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCccc-ccccCCCcccccccccccCCCCCcCCcc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFED-FGLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
+| |||+|||+..+++.+++... .++|+++++|.. |+... +..+ | .
T Consensus 124 ~D-iV~vHdyhl~~l~~~lr~~~------~~~~i~~~~H~p-----fp~~~~~~~l--p--------------------~ 169 (482)
T 1uqt_A 124 DD-IIWIHDYHLLPFAHELRKRG------VNNRIGFFLHIP-----FPTPEIFNAL--P--------------------T 169 (482)
T ss_dssp TC-EEEEESGGGTTHHHHHHHTT------CCSCEEEECCSC-----CCCHHHHTTS--T--------------------T
T ss_pred CC-EEEEECchHHHHHHHHHHhC------CCCcEEEEEcCC-----CCCHHHHhhC--c--------------------c
Confidence 58 99999999999999888753 589999999953 22110 0000 0 1
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccc--cCCccc------hhhhhccCeEEeeCCCccCccCCCCccccccccCcch
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGE--DKGVEL------DNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDAST 379 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~g~~~------~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~ 379 (612)
...+...+..+|.+.+.+..+.+.+.+.. ..+.+. ...-+..++.+||||+|++.|.+....
T Consensus 170 ~~~il~~ll~~d~i~f~~~~~~~~f~~~~~~~l~~~~~~~~~~~~~g~~~~v~vip~GID~~~f~~~~~~---------- 239 (482)
T 1uqt_A 170 YDTLLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSAKSHTAWGKAFRTEVYPIGIEPKEIAKQAAG---------- 239 (482)
T ss_dssp HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHSCEEEETTTEEEETTEEEEEEECCCCCCHHHHHHHHHS----------
T ss_pred HHHHHHhhhccCeEEEECHHHHHHHHHHHHHHhCCccccCCeEEECCeEEEEEEEeccCCHHHHHHHhcC----------
Confidence 12233445678888888877666654210 011100 000012478999999999887542100
Q ss_pred hhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C----CcEEEEEeCCc----h---hHH
Q 007224 380 VMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E----NVQIIVLGTGK----K---PME 446 (612)
Q Consensus 380 ~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~----~~~lvivG~g~----~---~~~ 446 (612)
..... .+.++++++ ++++|+++||+++.||++.+++|++++.+ + +++|+++|.+. + .++
T Consensus 240 --~~~~~-~~~lr~~~~-----~~~vil~VgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vG~p~~~~~~~~~~l~ 311 (482)
T 1uqt_A 240 --PLPPK-LAQLKAELK-----NVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIR 311 (482)
T ss_dssp --CCCHH-HHHHHHHTT-----TCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHH
T ss_pred --cchHH-HHHHHHHhC-----CCEEEEEEeCCcccCCHHHHHHHHHHHHHhCccccCcEEEEEEECCCccchHHHHHHH
Confidence 00011 356777776 45799999999999999999999999854 3 47899999632 1 245
Q ss_pred HHHHHHHHHC----C----CceEEE-eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCC-----ceEEcCCCCc
Q 007224 447 KQLEQLEILY----P----EKARGV-AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGT-----VPIVASTGGL 512 (612)
Q Consensus 447 ~~l~~l~~~~----~----~~i~~~-~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~-----PvI~s~~gg~ 512 (612)
+++++++.+. + ..+.++ ...+.+++..+|+.||++|+||..||||++++|||+||+ |+|+|+.+|.
T Consensus 312 ~~l~~l~~~in~~~g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~ 391 (482)
T 1uqt_A 312 HQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA 391 (482)
T ss_dssp HHHHHHHHHHHHHHCBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG
T ss_pred HHHHHHHHHHhhhcccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC
Confidence 5666665432 1 125544 445788888999999999999999999999999999997 8999998888
Q ss_pred ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHHHHHHHHH
Q 007224 513 VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKWEETLLNL 587 (612)
Q Consensus 513 ~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~~~~y~~l 587 (612)
.+.+. +|+++ +|.|+++++++|.++++++ ++.+.++.+++. .+.|||+..++++++.|+++
T Consensus 392 ~~~l~---~g~lv----------~p~d~~~lA~ai~~lL~~~-~~~r~~~~~~~~~~v~~~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 392 ANELT---SALIV----------NPYDRDEVAAALDRALTMS-LAERISRHAEMLDVIVKNDINHWQECFISDLKQI 454 (482)
T ss_dssp GGTCT---TSEEE----------CTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHhC---CeEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhc
Confidence 88873 68987 9999999999999999862 334444444442 35699999999999999876
No 22
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.95 E-value=4.8e-27 Score=248.20 Aligned_cols=224 Identities=14% Similarity=0.080 Sum_probs=168.9
Q ss_pred HHHHHH-HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCC-CccCccCCCCccccccccCcchhhcchHHH
Q 007224 310 WMKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 310 ~~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
+.+..+ +.+|.++++|+..++.+.+ +|++.+ ++.+|+|| +|...+.+....
T Consensus 142 ~~~~~~~~~~d~ii~~s~~~~~~~~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~~------------------ 194 (375)
T 3beo_A 142 MNRQLTGVMADLHFSPTAKSATNLQK---ENKDES------RIFITGNTAIDALKTTVKETY------------------ 194 (375)
T ss_dssp HHHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHCCSSC------------------
T ss_pred hhhhHHhhhhheeeCCCHHHHHHHHH---cCCCcc------cEEEECChhHhhhhhhhhhhh------------------
Confidence 344434 3599999999999999876 576654 89999999 887665443100
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcCcccc-cCHHHHHHHHHhccc--CCcEEEEEeCCc-hhHHHHHHHHHHHCCCceEEE
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVLGTGK-KPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGrl~~~-Kg~d~ll~a~~~l~~--~~~~lvivG~g~-~~~~~~l~~l~~~~~~~i~~~ 463 (612)
+..+++++ + ++..+++++||+.++ ||++.+++|+.++.+ +++++++ |.|+ ..+.+.++++... ..++.+.
T Consensus 195 ~~~~~~~~--~--~~~~vl~~~gr~~~~~K~~~~li~a~~~l~~~~~~~~~i~-~~g~~~~~~~~~~~~~~~-~~~v~~~ 268 (375)
T 3beo_A 195 SHPVLEKL--G--NNRLVLMTAHRRENLGEPMRNMFRAIKRLVDKHEDVQVVY-PVHMNPVVRETANDILGD-YGRIHLI 268 (375)
T ss_dssp CCHHHHTT--T--TSEEEEEECCCGGGTTHHHHHHHHHHHHHHHHCTTEEEEE-ECCSCHHHHHHHHHHHTT-CTTEEEE
T ss_pred hHHHHHhc--c--CCCeEEEEecccccchhHHHHHHHHHHHHHhhCCCeEEEE-eCCCCHHHHHHHHHHhhc-cCCEEEe
Confidence 11233333 2 234578899999876 999999999999865 6888655 5554 3345566655322 2357776
Q ss_pred eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCCCCCHHH
Q 007224 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 464 ~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 542 (612)
+......+..+|+.||++|+|| |.+++|||+||+|||+++. ||..|++.++ +|+++ ++ |+++
T Consensus 269 g~~~~~~~~~~~~~ad~~v~~s-----g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~g-~g~~v----------~~-d~~~ 331 (375)
T 3beo_A 269 EPLDVIDFHNVAARSYLMLTDS-----GGVQEEAPSLGVPVLVLRDTTERPEGIEAG-TLKLA----------GT-DEET 331 (375)
T ss_dssp CCCCHHHHHHHHHTCSEEEECC-----HHHHHHHHHHTCCEEECSSCCSCHHHHHTT-SEEEC----------CS-CHHH
T ss_pred CCCCHHHHHHHHHhCcEEEECC-----CChHHHHHhcCCCEEEecCCCCCceeecCC-ceEEc----------CC-CHHH
Confidence 6666667788999999999999 7789999999999999964 9999999888 99986 65 9999
Q ss_pred HHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHH
Q 007224 543 VSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 543 la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~ 585 (612)
++++|.+++++ ++.+.+|++++ ..+.|+|+.+++.++++++
T Consensus 332 la~~i~~ll~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 374 (375)
T 3beo_A 332 IFSLADELLSD--KEAHDKMSKASNPYGDGRASERIVEAILKHFN 374 (375)
T ss_dssp HHHHHHHHHHC--HHHHHHHCCCCCTTCCSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhC--hHhHhhhhhcCCCCCCCcHHHHHHHHHHHHhh
Confidence 99999999998 67777777655 2467999999999888763
No 23
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.95 E-value=4.7e-27 Score=249.31 Aligned_cols=281 Identities=15% Similarity=0.083 Sum_probs=196.0
Q ss_pred CCcEEEEecCC-ccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcCCc
Q 007224 228 GEDVVFVANDW-HTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVRGR 306 (612)
Q Consensus 228 ~pDvvih~h~~-~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 306 (612)
+|| +||+|+. ...+...++... .++|++++.|+......+ .+ .
T Consensus 86 ~pD-vv~~~~~~~~~~~~~~~a~~-------~~ip~v~~~~~~~~~~~~-------------------------~~---~ 129 (384)
T 1vgv_A 86 KPD-VVLVHGDTTTTLATSLAAFY-------QRIPVGHVEAGLRTGDLY-------------------------SP---W 129 (384)
T ss_dssp CCS-EEEEETTCHHHHHHHHHHHT-------TTCCEEEESCCCCCSCTT-------------------------SS---T
T ss_pred CCC-EEEEeCCchHHHHHHHHHHH-------HCCCEEEEeccccccccc-------------------------CC---C
Confidence 699 8999865 333333333322 589999988854210000 00 0
Q ss_pred chhHHHHH-HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcch
Q 007224 307 KINWMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 307 ~~~~~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
...+.+.. .+.+|.++++|+..++.+.+ +|++.+ ++.+++||+ |...+.+... ...
T Consensus 130 ~~~~~~~~~~~~~d~ii~~s~~~~~~l~~---~g~~~~------~i~vi~n~~~d~~~~~~~~~-------------~~~ 187 (384)
T 1vgv_A 130 PEEANRTLTGHLAMYHFSPTETSRQNLLR---ENVADS------RIFITGNTVIDALLWVRDQV-------------MSS 187 (384)
T ss_dssp THHHHHHHHHTTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHT-------------TTC
T ss_pred chHhhHHHHHhhccEEEcCcHHHHHHHHH---cCCChh------hEEEeCChHHHHHHhhhhcc-------------ccc
Confidence 11223333 34599999999999999875 677654 799999995 4322211000 000
Q ss_pred HHHHHHHHHHhC-CCCCCCCcEEEEEcCcccc-cCHHHHHHHHHhccc--CCcEEEEE-eCCchhHHHHHHHHHHHCCCc
Q 007224 385 PLLKEALQAEVG-LPVDRNIPVIGFIGRLEEQ-KGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEK 459 (612)
Q Consensus 385 ~~~k~~l~~~~g-l~~~~~~~~il~iGrl~~~-Kg~d~ll~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~ 459 (612)
...+..+++++| ++.+ +..+++++||+.++ ||++.+++|+.++.+ ++++|+++ |.+ +.+.+.++++.... .+
T Consensus 188 ~~~~~~~~~~~~~~~~~-~~~vl~~~gr~~~~~kg~~~li~a~~~l~~~~~~~~l~i~~g~~-~~~~~~l~~~~~~~-~~ 264 (384)
T 1vgv_A 188 DKLRSELAANYPFIDPD-KKMILVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLN-PNVREPVNRILGHV-KN 264 (384)
T ss_dssp HHHHHHHHTTCTTCCTT-SEEEEEECCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHHTTC-TT
T ss_pred hhhhHHHHHhccccCCC-CCEEEEEeCCccccchHHHHHHHHHHHHHhhCCCeEEEEEcCCC-HHHHHHHHHHhhcC-CC
Confidence 001235677777 6422 33578899999876 999999999999865 68999886 433 23566666664332 35
Q ss_pred eEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC-CCcccceecCceEEEecccccccCCCCCC
Q 007224 460 ARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 460 i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~ 538 (612)
+.+.+....+.+..+|+.||++|+|| |.+++|||+||+|||+++. ||..|++.+| +|+++ ++
T Consensus 265 v~~~g~~~~~~~~~~~~~ad~~v~~S-----g~~~lEA~a~G~PvI~~~~~~~~~e~v~~g-~g~lv----------~~- 327 (384)
T 1vgv_A 265 VILIDPQEYLPFVWLMNHAWLILTDS-----GGIQEEAPSLGKPVLVMRDTTERPEAVTAG-TVRLV----------GT- 327 (384)
T ss_dssp EEEECCCCHHHHHHHHHHCSEEEESS-----STGGGTGGGGTCCEEEESSCCSCHHHHHHT-SEEEE----------CS-
T ss_pred EEEeCCCCHHHHHHHHHhCcEEEECC-----cchHHHHHHcCCCEEEccCCCCcchhhhCC-ceEEe----------CC-
Confidence 77665445567778999999999999 4458999999999999986 9999999888 99987 66
Q ss_pred CHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHH
Q 007224 539 DVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 539 d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
|+++++++|.+++++ ++.+.+|++++ ..+.|+|+.+++.++++|.+++
T Consensus 328 d~~~la~~i~~ll~d--~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 377 (384)
T 1vgv_A 328 DKQRIVEEVTRLLKD--ENEYQAMSRAHNPYGDGQACSRILEALKNNRISLG 377 (384)
T ss_dssp SHHHHHHHHHHHHHC--HHHHHHHHSSCCTTCCSCHHHHHHHHHHHTCCCC-
T ss_pred CHHHHHHHHHHHHhC--hHHHhhhhhccCCCcCCCHHHHHHHHHHHHHHhhc
Confidence 999999999999998 77778887665 3467999999999998887665
No 24
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.95 E-value=5.2e-27 Score=262.53 Aligned_cols=212 Identities=14% Similarity=0.085 Sum_probs=165.9
Q ss_pred hcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhC
Q 007224 317 ESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVG 396 (612)
Q Consensus 317 ~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g 396 (612)
.+|.++++|+...+ ++ .++.+|||..+.....+... ....++++|
T Consensus 328 ~~d~~i~~s~~~~~-------~~---------~~i~~ipn~~~~~~~~~~~~-------------------~~~~r~~~~ 372 (568)
T 2vsy_A 328 LGDAFALPPALEPF-------YS---------EHVLRLQGAFQPSDTSRVVA-------------------EPPSRTQCG 372 (568)
T ss_dssp EECTTTSCTTTGGG-------CS---------SEEEECSSCSCCCCTTCCCC-------------------CCCCTGGGT
T ss_pred EECCCcCCcccccC-------Cc---------ceeEcCCCcCCCCCCCCCCC-------------------CCCCccccC
Confidence 47888888875432 22 17899999543322111100 112366778
Q ss_pred CCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEe-CCchhHHHHHHHHHHHCC---CceEEEeccChHH
Q 007224 397 LPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLG-TGKKPMEKQLEQLEILYP---EKARGVAKFNIPL 470 (612)
Q Consensus 397 l~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG-~g~~~~~~~l~~l~~~~~---~~i~~~~~~~~~~ 470 (612)
++.+ .+++++||+.+ ||++.+++++.++.+ ++++|+|+| +|+ ..+.++++..+++ +++.+.+..+.+.
T Consensus 373 ~~~~---~~v~~~g~~~~-K~~~~li~a~~~l~~~~~~~~l~i~G~~g~--~~~~l~~~~~~~~l~~~~v~~~g~~~~~~ 446 (568)
T 2vsy_A 373 LPEQ---GVVLCCFNNSY-KLNPQSMARMLAVLREVPDSVLWLLSGPGE--ADARLRAFAHAQGVDAQRLVFMPKLPHPQ 446 (568)
T ss_dssp CCTT---SCEEEECCCGG-GCCHHHHHHHHHHHHHCTTCEEEEECCSTT--HHHHHHHHHHHTTCCGGGEEEECCCCHHH
T ss_pred CCCC---CEEEEeCCccc-cCCHHHHHHHHHHHHhCCCcEEEEecCCHH--HHHHHHHHHHHcCCChhHEEeeCCCCHHH
Confidence 8632 35669999999 999999999999855 799999999 666 6677877777764 4588887777778
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEE-------cCCC-------CcccceecCceEEEecccccccCCCC
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV-------ASTG-------GLVDTVEEGFTGFQMGSFSVDCEAVD 536 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~-------s~~g-------g~~e~v~~g~~G~l~~~~~~~~~~v~ 536 (612)
+..+|+.||++|+||.+ +||++++|||+||+|||+ |+.| |+.|+|.
T Consensus 447 ~~~~~~~adv~v~ps~~-~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~g~~e~v~------------------- 506 (568)
T 2vsy_A 447 YLARYRHADLFLDTHPY-NAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHLGLDEMNV------------------- 506 (568)
T ss_dssp HHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHHTCGGGBC-------------------
T ss_pred HHHHHhcCCEEeeCCCC-CCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHCCChhhhc-------------------
Confidence 88899999999999999 999999999999999999 9999 8888763
Q ss_pred CCCHHHHHHHHHHHHHhhCHHHHHHHHHHH---H--HhcCCcHHHHHHHHHHHHHHHHcCC
Q 007224 537 PVDVAAVSTTVRRALATYGTQALAEMMKNG---M--AQDLSWKGPAKKWEETLLNLEVAGS 592 (612)
Q Consensus 537 ~~d~~~la~~l~~ll~~~~~~~~~~~~~~~---~--~~~~sw~~~a~~~~~~y~~l~~~~~ 592 (612)
.|+++++++|.+++++ ++.+.+|++++ + .+.|||+.++++++++|++++....
T Consensus 507 -~~~~~la~~i~~l~~~--~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~y~~~~~~~~ 564 (568)
T 2vsy_A 507 -ADDAAFVAKAVALASD--PAALTALHARVDVLRRASGVFHMDGFADDFGALLQALARRHG 564 (568)
T ss_dssp -SSHHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred -CCHHHHHHHHHHHhcC--HHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2899999999999998 66666776665 3 3779999999999999999986543
No 25
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=99.94 E-value=1.3e-25 Score=216.30 Aligned_cols=184 Identities=30% Similarity=0.511 Sum_probs=156.3
Q ss_pred EeeCCCccCccC--CCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcc-cccCHHHHHHHHHhcc
Q 007224 353 GIVNGMDVQEWN--PLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLE-EQKGSDILAAAIPHFI 429 (612)
Q Consensus 353 vI~Ngvd~~~~~--p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~-~~Kg~d~ll~a~~~l~ 429 (612)
+||||+|.+.|. |... .....+..+++++|++ +.++|+|+||+. +.||++.+++++..+.
T Consensus 1 gipngvd~~~f~~~~~~~--------------~~~~~~~~~r~~~~~~---~~~~i~~~G~~~~~~K~~~~li~a~~~l~ 63 (200)
T 2bfw_A 1 GSHNGIDCSFWNESYLTG--------------SRDERKKSLLSKFGMD---EGVTFMFIGRFDRGQKGVDVLLKAIEILS 63 (200)
T ss_dssp ----CCCTTTSSGGGSCS--------------CHHHHHHHHHHHTTCC---SCEEEEEESCBCSSSSCHHHHHHHHHHHT
T ss_pred CCCCccChhhcccccccc--------------chhhHHHHHHHHcCCC---CCCEEEEeeccccccCCHHHHHHHHHHHH
Confidence 489999999998 7531 1122356789999987 346999999999 9999999999999995
Q ss_pred --c--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEE-EeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCce
Q 007224 430 --K--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARG-VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVP 504 (612)
Q Consensus 430 --~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~-~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~Pv 504 (612)
+ ++++|+|+|.+.+.+.+.++++..+++ ++.+ .+..+.+.+..+|+.||++|+||..|+||++++|||+||+||
T Consensus 64 ~~~~~~~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~Pv 142 (200)
T 2bfw_A 64 SKKEFQEMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIP 142 (200)
T ss_dssp TSGGGGGEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEE
T ss_pred hhccCCCeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCCCE
Confidence 3 689999999988667788888888887 6888 777788888899999999999999999999999999999999
Q ss_pred EEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH-hhCHHHHHHHHHHHH
Q 007224 505 IVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA-TYGTQALAEMMKNGM 567 (612)
Q Consensus 505 I~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~-~~~~~~~~~~~~~~~ 567 (612)
|+++.+|+.|++ ++.+|+++ ++.|+++++++|.++++ + ++.+.+|++++.
T Consensus 143 I~~~~~~~~e~~-~~~~g~~~----------~~~~~~~l~~~i~~l~~~~--~~~~~~~~~~a~ 193 (200)
T 2bfw_A 143 IASAVGGLRDII-TNETGILV----------KAGDPGELANAILKALELS--RSDLSKFRENCK 193 (200)
T ss_dssp EEESCHHHHHHC-CTTTCEEE----------CTTCHHHHHHHHHHHHHCC--HHHHHHHHHHHH
T ss_pred EEeCCCChHHHc-CCCceEEe----------cCCCHHHHHHHHHHHHhcC--HHHHHHHHHHHH
Confidence 999999999999 89999988 88999999999999999 8 677777777663
No 26
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=99.93 E-value=1.5e-24 Score=234.96 Aligned_cols=294 Identities=14% Similarity=0.164 Sum_probs=213.3
Q ss_pred CcEEEEecCCccchHHHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccc-cccCCCcccccccccccCCCCCcCCcc
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDF-GLLNLPAQFKSSFDFIDGYNKPVRGRK 307 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ 307 (612)
.| +|..||+|..++|.+++... .+.++.|.+|.. ||...+ .. +|.. .
T Consensus 150 ~D-~VwVhDYhL~llp~~lR~~~------~~~~igfFlHiP-----fPs~e~f~~--Lp~~------------------~ 197 (496)
T 3t5t_A 150 DP-VYLVHDYQLVGVPALLREQR------PDAPILLFVHIP-----WPSADYWRI--LPKE------------------I 197 (496)
T ss_dssp SC-EEEEESGGGTTHHHHHHHHC------TTSCEEEECCSC-----CCCHHHHTT--SCHH------------------H
T ss_pred CC-EEEEeCccHhHHHHHHHhhC------CCCeEEEEEcCC-----CCCHHHHhh--CcHh------------------H
Confidence 46 99999999999999999875 689999999942 332211 11 1100 1
Q ss_pred hhHHHHHHHhcCEEEecCHHHHHHHHccc--cC-Cccchh-------hhhccCeEEeeCCCccCccCCCCccccccccCc
Q 007224 308 INWMKAGILESDMVLTVSPHYAQELVSGE--DK-GVELDN-------IIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDA 377 (612)
Q Consensus 308 ~~~~k~~~~~ad~vi~vS~~~~~~l~~~~--~~-g~~~~~-------~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~ 377 (612)
...+-.++..+|.|.+.++.+++.+.+.. .. |.+.+. .-+..++.++|+|||++.|.+....
T Consensus 198 r~ell~gll~~DligF~t~~y~~~Fl~~~~r~l~g~~~~~~~~~v~~~gr~v~v~viP~GID~~~f~~~~~~-------- 269 (496)
T 3t5t_A 198 RTGILHGMLPATTIGFFADRWCRNFLESVADLLPDARIDREAMTVEWRGHRTRLRTMPLGYSPLTLDGRNPQ-------- 269 (496)
T ss_dssp HHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHCTTCEEETTTTEEEETTEEEEEEECCCCBCGGGC----CC--------
T ss_pred HHHHHHHHHhCCEEEEecHHHHHHHHHHHHHHhcCCcccccCCeEEECCEEEEEEEeccEeCHHHhchhhHH--------
Confidence 24455678899999999999988755411 11 322110 0122478899999999999765320
Q ss_pred chhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--C---CcEEEEEeCC-----c--hhH
Q 007224 378 STVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--E---NVQIIVLGTG-----K--KPM 445 (612)
Q Consensus 378 ~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~---~~~lvivG~g-----~--~~~ 445 (612)
..+.++++++ ++++|+++||+++.||++.+++|+ ++.+ + ++.|+++|.. + ..+
T Consensus 270 ---------~~~~lr~~~~-----~~~lIl~VgRLd~~KGi~~lL~Af-~ll~~~P~~~~v~Lv~Vg~psr~~~~~y~~l 334 (496)
T 3t5t_A 270 ---------LPEGIEEWAD-----GHRLVVHSGRTDPIKNAERAVRAF-VLAARGGGLEKTRMLVRMNPNRLYVPANADY 334 (496)
T ss_dssp ---------CCTTHHHHHT-----TSEEEEEEEESSGGGCHHHHHHHH-HHHHHTSSCTTEEEEEEEECCCTTSHHHHHH
T ss_pred ---------HHHHHHHHhC-----CceEEEEcccCccccCHHHHHHHH-HHHHhCcccceEEEEEEECCCCCCchHHHHH
Confidence 0145677776 458999999999999999999999 7754 4 3678888742 1 234
Q ss_pred HHHHHHHHHHCC----C-ceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcC---CceEEcCCCCccccee
Q 007224 446 EKQLEQLEILYP----E-KARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYG---TVPIVASTGGLVDTVE 517 (612)
Q Consensus 446 ~~~l~~l~~~~~----~-~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G---~PvI~s~~gg~~e~v~ 517 (612)
++++++++.+.+ . .+.+.+..+.+++..+|+.||++++||..||||++.+|||+|| .|+|+|..+|..+.+.
T Consensus 335 ~~~l~~lv~~in~~~g~~~V~f~g~v~~~el~aly~~ADv~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~ 414 (496)
T 3t5t_A 335 VHRVETAVAEANAELGSDTVRIDNDNDVNHTIACFRRADLLIFNSTVDGQNLSTFEAPLVNERDADVILSETCGAAEVLG 414 (496)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEECCCHHHHHHHHHHCSEEEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG
T ss_pred HHHHHHHHHHhccccCCcCEEEeCCCCHHHHHHHHHhccEEEECcccccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC
Confidence 566666655432 1 3777766778888899999999999999999999999999997 8999999999888884
Q ss_pred cCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 518 EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 518 ~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
.+|+++ +|.|+++++++|.++++++ .++++++.++. ....+++..-++.+++-+......
T Consensus 415 --~~allV----------nP~D~~~lA~AI~~aL~m~-~~er~~r~~~~~~~V~~~d~~~W~~~fl~~L~~~~~~ 476 (496)
T 3t5t_A 415 --EYCRSV----------NPFDLVEQAEAISAALAAG-PRQRAEAAARRRDAARPWTLEAWVQAQLDGLAADHAA 476 (496)
T ss_dssp --GGSEEE----------CTTBHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHTTCBHHHHHHHHHHHHHHHHHH
T ss_pred --CCEEEE----------CCCCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHhhcccc
Confidence 368987 9999999999999999974 23333333333 357899999999998888877544
No 27
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=99.93 E-value=2.8e-25 Score=249.01 Aligned_cols=341 Identities=17% Similarity=0.166 Sum_probs=249.9
Q ss_pred CCcEEEEecCCccchHHH-HHHHhhcCCCCC-------CCceEEEEEecCccccc--CCcccccccCCCc----------
Q 007224 228 GEDVVFVANDWHTSLIPC-YLKTMYKPKGMY-------KSAKVVFCIHNIAYQGR--FAFEDFGLLNLPA---------- 287 (612)
Q Consensus 228 ~pDvvih~h~~~~~~~~~-~l~~~~~~~~~~-------~~~~vv~~iH~~~~~~~--~~~~~~~~~~l~~---------- 287 (612)
.|| +||+||||+++++. +++..+-..+.- ....++||+|++.++|. |+...+..+- |.
T Consensus 320 ~p~-viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~eglE~wp~~l~~~lL-Pr~~~ii~~in~ 397 (824)
T 2gj4_A 320 DKV-AIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEALERWPVHLLETLL-PRHLQIIYEINQ 397 (824)
T ss_dssp HHE-EEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGSCEEEHHHHHHHC-HHHHHHHHHHHH
T ss_pred CCc-EEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHhhhchHHHHHHhC-chHHHHHHHHHH
Confidence 478 99999999999888 554433211110 23349999999999998 7766553311 11
Q ss_pred cccc-----------ccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeC
Q 007224 288 QFKS-----------SFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVN 356 (612)
Q Consensus 288 ~~~~-----------~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~N 356 (612)
.|.. .+......... .....++++.++..|+.|.+||+.+.+.+.. ..++- .-. ..+.++..|.|
T Consensus 398 ~f~~~~~~~~~~~~~~~~~~~~i~~~-~~~~vnMa~lai~~S~~VNgVS~lH~e~ik~-~~f~~-~~~-~~p~k~~~iTN 473 (824)
T 2gj4_A 398 RFLNRVAAAFPGDVDRLRRMSLVEEG-AVKRINMAHLCIAGSHAVNGVARIHSEILKK-TIFKD-FYE-LEPHKFQNKTN 473 (824)
T ss_dssp HHHHHHHHHSTTCHHHHHHHCSEECS-SSCEEEHHHHHHHTCSCEEESSHHHHHHHHH-TTTHH-HHH-HCGGGEEECCC
T ss_pred HHHHHHHHHcCCcHHHHHhhhhhhhc-CCCcccHHHHHHHhcCceeeEcHHHHHHHhh-HHhHH-HHH-cChhhcccccC
Confidence 1100 00000000000 1246789999999999999999999999974 22331 111 22458999999
Q ss_pred CCccCcc----CCCCccccccc-----------------cCc-chhh----cchHHHHHH----HHHHhCCCCCCCCcEE
Q 007224 357 GMDVQEW----NPLTDKYIGVK-----------------YDA-STVM----DAKPLLKEA----LQAEVGLPVDRNIPVI 406 (612)
Q Consensus 357 gvd~~~~----~p~~~~~~~~~-----------------~~~-~~~~----~~~~~~k~~----l~~~~gl~~~~~~~~i 406 (612)
|||...| +|..++.|..+ |.. .++. +.|..+|.+ ++++.|++.+++.+.+
T Consensus 474 GI~~rrWl~~~NP~l~~lI~~~ig~~W~~~~~~l~~L~~y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~ 553 (824)
T 2gj4_A 474 GITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFD 553 (824)
T ss_dssp CBCTCCCCCCTCHHHHHHHHHHHCSGGGGCGGGGGGGGGGTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEE
T ss_pred CcChhhhcccCCHhHHHHHHHhcCchhhhCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceE
Confidence 9999999 77766666544 665 3332 456667776 8999999999999999
Q ss_pred EEEcCcccccCHHHH-HHHHHhcc---c-C-----CcEEEEEeCCchhHHHH------HHHHHHHC------CC--ceEE
Q 007224 407 GFIGRLEEQKGSDIL-AAAIPHFI---K-E-----NVQIIVLGTGKKPMEKQ------LEQLEILY------PE--KARG 462 (612)
Q Consensus 407 l~iGrl~~~Kg~d~l-l~a~~~l~---~-~-----~~~lvivG~g~~~~~~~------l~~l~~~~------~~--~i~~ 462 (612)
+++.|+.++||++++ +..+.++. + + +++|++.|++.+.++.. +.+++..+ ++ ++.+
T Consensus 554 g~vkRl~eYKRq~L~~l~~i~~~~~i~~~~~~~~~p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvF 633 (824)
T 2gj4_A 554 VQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIF 633 (824)
T ss_dssp EEESCCCGGGTHHHHHHHHHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEE
T ss_pred eeeecchhhcchhhHHHHHHHHHHHHHhCCCCCCCCEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEE
Confidence 999999999999998 88888774 2 2 67999999998655554 77777654 45 7888
Q ss_pred EeccChHHHHHHHHhcCEEEeCCC--CCCCcHHHHHHHHcCCceEEcCCCCccccee--cCceEEEecccccccCCCCCC
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSR--FEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~--~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~--~g~~G~l~~~~~~~~~~v~~~ 538 (612)
...++..+++.++++||++++||+ +|+||+..+-||.+|++.|++-.|...|+.+ .+.|||+|| .
T Consensus 634 l~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~MKamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG----------~- 702 (824)
T 2gj4_A 634 LENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFG----------M- 702 (824)
T ss_dssp ETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECS----------C-
T ss_pred ECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHcCceEEEEecCccchhhhccCCCCEEEeC----------C-
Confidence 889999999999999999999999 8999999999999999999999898888765 356899984 2
Q ss_pred CHHHHHHHHH-------HHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 539 DVAAVSTTVR-------RALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 539 d~~~la~~l~-------~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
.++++ ..+. .+.+. .+.++++..+.+...|||... ..|.++|++++.
T Consensus 703 ~~~ev-~~l~~~~~~a~~~Y~~--~~~l~~v~d~i~~g~fs~~~~-~~y~~ly~~l~~ 756 (824)
T 2gj4_A 703 RVEDV-DRLDQRGYNAQEYYDR--IPELRQIIEQLSSGFFSPKQP-DLFKDIVNMLMH 756 (824)
T ss_dssp CHHHH-HHHHHHCCCHHHHHHH--CHHHHHHHHHHHHTTTCTTST-TTTHHHHHHHHH
T ss_pred cHHHH-HHHHHcCCCHHHHhcC--CHHHHHHHHHHHhCCCCCCCh-HHHHHHHHHHHc
Confidence 25555 4432 22222 356777777778899999988 889999999874
No 28
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=99.92 E-value=3.4e-24 Score=200.02 Aligned_cols=159 Identities=16% Similarity=0.171 Sum_probs=132.2
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
++|+|+||+.++||++.+++|+.++.+ ++++|+|+|+|+ ..+.++++..+++.++.. +..+.+.+..+|+.||++|
T Consensus 3 ~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~--~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv~v 79 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSVLIKAVALSKYKQDIVLLLKGKGP--DEKKIKLLAQKLGVKAEF-GFVNSNELLEILKTCTLYV 79 (166)
T ss_dssp EEEEEESCCSTTTTHHHHHHHHHTCTTGGGEEEEEECCST--THHHHHHHHHHHTCEEEC-CCCCHHHHHHHHTTCSEEE
T ss_pred eEEEEEeccchhcCHHHHHHHHHHhccCCCeEEEEEeCCc--cHHHHHHHHHHcCCeEEE-eecCHHHHHHHHHhCCEEE
Confidence 689999999999999999999999965 699999999987 467788888877765666 6667788889999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCC-ceEE-cCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCHHHHH
Q 007224 483 IPSRFEPCGLIQLHAMRYGT-VPIV-ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA 560 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~-PvI~-s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~~~~~ 560 (612)
+||.+|+||++++|||+||+ |||+ ++.|+..|++.++.+ ++ ++.|+++++++|.+++++ ++.+.
T Consensus 80 ~ps~~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~~~~~~--~~----------~~~~~~~l~~~i~~l~~~--~~~~~ 145 (166)
T 3qhp_A 80 HAANVESEAIACLEAISVGIVPVIANSPLSATRQFALDERS--LF----------EPNNAKDLSAKIDWWLEN--KLERE 145 (166)
T ss_dssp ECCCSCCCCHHHHHHHHTTCCEEEECCTTCGGGGGCSSGGG--EE----------CTTCHHHHHHHHHHHHHC--HHHHH
T ss_pred ECCcccCccHHHHHHHhcCCCcEEeeCCCCchhhhccCCce--EE----------cCCCHHHHHHHHHHHHhC--HHHHH
Confidence 99999999999999999998 9999 568899999988765 33 889999999999999998 66677
Q ss_pred HHHHHHH--HhcCCcHHHHHH
Q 007224 561 EMMKNGM--AQDLSWKGPAKK 579 (612)
Q Consensus 561 ~~~~~~~--~~~~sw~~~a~~ 579 (612)
++++++. .++|||+.++++
T Consensus 146 ~~~~~~~~~~~~~s~~~~~~~ 166 (166)
T 3qhp_A 146 RMQNEYAKSALNYTLENSVIQ 166 (166)
T ss_dssp HHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHCChhhhhcC
Confidence 7776663 488999998764
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.91 E-value=6.6e-22 Score=209.24 Aligned_cols=219 Identities=13% Similarity=0.042 Sum_probs=162.0
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQA 393 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~ 393 (612)
...+|.++++|+..++.+.+ +|++.+ ++.+++|++ |...+.+. +..+++
T Consensus 144 ~~~~~~~~~~s~~~~~~l~~---~g~~~~------ki~vi~n~~~d~~~~~~~---------------------~~~~~~ 193 (376)
T 1v4v_A 144 DVLTDLDFAPTPLAKANLLK---EGKREE------GILVTGQTGVDAVLLAAK---------------------LGRLPE 193 (376)
T ss_dssp HHHCSEEEESSHHHHHHHHT---TTCCGG------GEEECCCHHHHHHHHHHH---------------------HCCCCT
T ss_pred HHHhceeeCCCHHHHHHHHH---cCCCcc------eEEEECCchHHHHhhhhh---------------------hhHHHH
Confidence 45699999999999999986 577654 789999965 42211100 001111
Q ss_pred HhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEE-eCCchhHHHHHHHHHHHCCCceEEEeccChHH
Q 007224 394 EVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPL 470 (612)
Q Consensus 394 ~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~ 470 (612)
++ + ++.++++++||+..+||++.+++|+.++.+ ++++++++ |++. ...+.++++... ..++.+.+......
T Consensus 194 ~~--~--~~~~vl~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-~~~~~l~~~~~~-~~~v~~~g~~g~~~ 267 (376)
T 1v4v_A 194 GL--P--EGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP-VVREAVFPVLKG-VRNFVLLDPLEYGS 267 (376)
T ss_dssp TC--C--SSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH-HHHHHHHHHHTT-CTTEEEECCCCHHH
T ss_pred hc--C--CCCEEEEEeCcccchHHHHHHHHHHHHHHhhCCCeEEEEECCCCH-HHHHHHHHHhcc-CCCEEEECCCCHHH
Confidence 11 1 234567789999989999999999999865 68998886 6554 345666666433 23576665444456
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHH
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRR 549 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ 549 (612)
+..+|+.||++|.|| | |+ ++|||+||+|+|++ +.+|..+++.++ +|+++ + .|+++++++|.+
T Consensus 268 ~~~~~~~ad~~v~~S--~--g~-~lEA~a~G~PvI~~~~~~~~~~~~~~g-~g~lv----------~-~d~~~la~~i~~ 330 (376)
T 1v4v_A 268 MAALMRASLLLVTDS--G--GL-QEEGAALGVPVVVLRNVTERPEGLKAG-ILKLA----------G-TDPEGVYRVVKG 330 (376)
T ss_dssp HHHHHHTEEEEEESC--H--HH-HHHHHHTTCCEEECSSSCSCHHHHHHT-SEEEC----------C-SCHHHHHHHHHH
T ss_pred HHHHHHhCcEEEECC--c--CH-HHHHHHcCCCEEeccCCCcchhhhcCC-ceEEC----------C-CCHHHHHHHHHH
Confidence 778999999999999 2 44 88999999999998 578888987655 78875 4 599999999999
Q ss_pred HHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 550 ALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
++++ ++.+++|+++ .+.|.|...++++.+++++++..
T Consensus 331 ll~d--~~~~~~~~~~--~~~~~~~~~~~~i~~~i~~~~~~ 367 (376)
T 1v4v_A 331 LLEN--PEELSRMRKA--KNPYGDGKAGLMVARGVAWRLGL 367 (376)
T ss_dssp HHTC--HHHHHHHHHS--CCSSCCSCHHHHHHHHHHHHTTS
T ss_pred HHhC--hHhhhhhccc--CCCCCCChHHHHHHHHHHHHhcc
Confidence 9997 7777888753 46788888999999999988743
No 30
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=99.86 E-value=6.3e-21 Score=180.47 Aligned_cols=142 Identities=15% Similarity=0.199 Sum_probs=124.8
Q ss_pred CCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCch--hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 401 RNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 401 ~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~--~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
+++++|+|+||+.+.||++.+++++.++ ++++|+|+|.+.. .+++.++++....++++.+.+..+.+++..+|+.|
T Consensus 21 ~~~~~i~~~G~~~~~Kg~~~li~a~~~l--~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~a 98 (177)
T 2f9f_A 21 CYGDFWLSVNRIYPEKRIELQLEVFKKL--QDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRC 98 (177)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHC--TTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHC
T ss_pred CCCCEEEEEeccccccCHHHHHHHHHhC--CCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhC
Confidence 4568999999999999999999999999 7899999999873 34444443333455678888888888889999999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhC
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG 555 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~ 555 (612)
|++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++ +.|+++++++|.++++++.
T Consensus 99 di~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~-----------~~d~~~l~~~i~~l~~~~~ 164 (177)
T 2f9f_A 99 KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLV-----------NADVNEIIDAMKKVSKNPD 164 (177)
T ss_dssp SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEE-----------CSCHHHHHHHHHHHHHCTT
T ss_pred CEEEeCCCcCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEe-----------CCCHHHHHHHHHHHHhCHH
Confidence 99999999999999999999999999999999999999999999963 6799999999999999843
No 31
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=99.84 E-value=4.4e-20 Score=195.93 Aligned_cols=187 Identities=13% Similarity=0.050 Sum_probs=138.6
Q ss_pred HHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcchHHHHH
Q 007224 310 WMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 310 ~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~ 389 (612)
+++..+..+|.++++|+..++.+.+ +|++ ++.+|+|+. |.+...+
T Consensus 146 ~~~~~~~~~d~ii~~S~~~~~~l~~---~g~~--------ki~vi~n~~----f~~~~~~-------------------- 190 (374)
T 2xci_A 146 IEKILSKKFDLIIMRTQEDVEKFKT---FGAK--------RVFSCGNLK----FICQKGK-------------------- 190 (374)
T ss_dssp HHHHHHTTCSEEEESCHHHHHHHHT---TTCC--------SEEECCCGG----GCCCCCS--------------------
T ss_pred HHHHHHHhCCEEEECCHHHHHHHHH---cCCC--------eEEEcCCCc----cCCCcCh--------------------
Confidence 5566788999999999999999986 5654 688999973 3222110
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCce-------
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKA------- 460 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i------- 460 (612)
++ .+ ..+++++.|+ ..||++.+++|+.++.+ ++++|+|+|.|+.. .+.++++..+.+...
T Consensus 191 --~~--~l----~~~vi~~~~~--~~k~~~~ll~A~~~l~~~~p~~~lvivG~g~~~-~~~l~~~~~~~gl~~~~~~~~~ 259 (374)
T 2xci_A 191 --GI--KL----KGEFIVAGSI--HTGEVEIILKAFKEIKKTYSSLKLILVPRHIEN-AKIFEKKARDFGFKTSFFENLE 259 (374)
T ss_dssp --CC--CC----SSCEEEEEEE--CGGGHHHHHHHHHHHHTTCTTCEEEEEESSGGG-HHHHHHHHHHTTCCEEETTCCC
T ss_pred --hh--hh----cCCEEEEEeC--CCchHHHHHHHHHHHHhhCCCcEEEEECCCHHH-HHHHHHHHHHCCCceEEecCCC
Confidence 00 01 1256777775 46899999999999965 68999999988732 245666666655221
Q ss_pred --EEEeccChHHHHHHHHhcCEEEeCCCC-CCCcHHHHHHHHcCCceEEc-CCCCcccceecC-ceEEEecccccccCCC
Q 007224 461 --RGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEG-FTGFQMGSFSVDCEAV 535 (612)
Q Consensus 461 --~~~~~~~~~~~~~~l~~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g-~~G~l~~~~~~~~~~v 535 (612)
..+..+. +++..+|+.||++++||.+ |++|++++|||+||+|||++ +.++..|++.+. .+|+++
T Consensus 260 ~~v~~~~~~-~dl~~~y~~aDv~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~G~l~---------- 328 (374)
T 2xci_A 260 GDVILVDRF-GILKELYPVGKIAIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKEGAGF---------- 328 (374)
T ss_dssp SSEEECCSS-SCHHHHGGGEEEEEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHTTCEE----------
T ss_pred CcEEEECCH-HHHHHHHHhCCEEEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHCCCEE----------
Confidence 1122222 4456799999999888765 67899999999999999975 789999988763 467766
Q ss_pred CCCCHHHHHHHHHHHHHh
Q 007224 536 DPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 536 ~~~d~~~la~~l~~ll~~ 553 (612)
.+.|+++|+++|.+++++
T Consensus 329 ~~~d~~~La~ai~~ll~d 346 (374)
T 2xci_A 329 EVKNETELVTKLTELLSV 346 (374)
T ss_dssp ECCSHHHHHHHHHHHHHS
T ss_pred EeCCHHHHHHHHHHHHhH
Confidence 778999999999999987
No 32
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=99.81 E-value=3.9e-18 Score=177.90 Aligned_cols=244 Identities=16% Similarity=0.105 Sum_probs=166.8
Q ss_pred CCcEEEEecC--CccchH-HHHHHHhhcCCCCCCCceEEEEEecCcccccCCcccccccCCCcccccccccccCCCCCcC
Q 007224 228 GEDVVFVAND--WHTSLI-PCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNKPVR 304 (612)
Q Consensus 228 ~pDvvih~h~--~~~~~~-~~~l~~~~~~~~~~~~~~vv~~iH~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 304 (612)
++| +|+.+. |++..+ ..+++...+ .++|+++++|++.+.. +. ..
T Consensus 74 ~~D-vIi~q~P~~~~~~~~~~~~~~lk~-----~~~k~i~~ihDl~pl~-~~----------~~---------------- 120 (339)
T 3rhz_A 74 HGD-VVIFQTPTWNTTEFDEKLMNKLKL-----YDIKIVLFIHDVVPLM-FS----------GN---------------- 120 (339)
T ss_dssp TTC-EEEEEECCSSCHHHHHHHHHHHTT-----SSCEEEEEESCCHHHH-CG----------GG----------------
T ss_pred CCC-EEEEeCCCcchhhHHHHHHHHHHh-----cCCEEEEEecccHHhh-Cc----------cc----------------
Confidence 589 555543 323222 344444321 4899999999875421 10 00
Q ss_pred CcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCccCCCCccccccccCcchhhcch
Q 007224 305 GRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQEWNPLTDKYIGVKYDASTVMDAK 384 (612)
Q Consensus 305 ~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~ 384 (612)
......++..++.||.|+++|+.+++.+.+ +|++.. ++.++++ |+...+..
T Consensus 121 ~~~~~~E~~~y~~aD~Ii~~S~~~~~~l~~---~G~~~~------ki~~~~~------~~~~~~~~-------------- 171 (339)
T 3rhz_A 121 FYLMDRTIAYYNKADVVVAPSQKMIDKLRD---FGMNVS------KTVVQGM------WDHPTQAP-------------- 171 (339)
T ss_dssp GGGHHHHHHHHTTCSEEEESCHHHHHHHHH---TTCCCS------EEEECCS------CCCCCCCC--------------
T ss_pred hhhHHHHHHHHHHCCEEEECCHHHHHHHHH---cCCCcC------ceeecCC------CCccCccc--------------
Confidence 012235677899999999999999999987 676533 4433332 21111000
Q ss_pred HHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEe
Q 007224 385 PLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVA 464 (612)
Q Consensus 385 ~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~ 464 (612)
+....+.++|+|+|++..... +..+ .++++|+|+|+|+.. +++ ++.+.+
T Consensus 172 ------------~~~~~~~~~i~yaG~l~k~~~-------L~~l-~~~~~f~ivG~G~~~----------~l~-nV~f~G 220 (339)
T 3rhz_A 172 ------------MFPAGLKREIHFPGNPERFSF-------VKEW-KYDIPLKVYTWQNVE----------LPQ-NVHKIN 220 (339)
T ss_dssp ------------CCCCEEEEEEEECSCTTTCGG-------GGGC-CCSSCEEEEESCCCC----------CCT-TEEEEE
T ss_pred ------------ccccCCCcEEEEeCCcchhhH-------HHhC-CCCCeEEEEeCCccc----------CcC-CEEEeC
Confidence 001124478999999985322 2233 378999999999843 244 699999
Q ss_pred ccChHHHHHHHHhcCEEEeCCCC-------CCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCC
Q 007224 465 KFNIPLAHMIIAGADFILIPSRF-------EPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDP 537 (612)
Q Consensus 465 ~~~~~~~~~~l~~adi~l~pS~~-------E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~ 537 (612)
..+.++++.+++.+|+.++.... .++|.+++||||||+|||+++.+++.|++.++.+|+.+
T Consensus 221 ~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~~~~~~~~v~~~~~G~~~------------ 288 (339)
T 3rhz_A 221 YRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQEGIANQELIENNGLGWIV------------ 288 (339)
T ss_dssp CCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEETTCTTTHHHHHHTCEEEE------------
T ss_pred CCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEccChhHHHHHHhCCeEEEe------------
Confidence 99999999999999999886211 25699999999999999999999999999999999986
Q ss_pred CCHHHHHHHHHHHHHhhCHHHHHHHHHHHH--HhcCCcHHHHHHH
Q 007224 538 VDVAAVSTTVRRALATYGTQALAEMMKNGM--AQDLSWKGPAKKW 580 (612)
Q Consensus 538 ~d~~~la~~l~~ll~~~~~~~~~~~~~~~~--~~~~sw~~~a~~~ 580 (612)
.+.++++++|..+. ++.+.+|++++. .+.++|....++.
T Consensus 289 ~~~~e~~~~i~~l~----~~~~~~m~~na~~~a~~~~~~~f~k~~ 329 (339)
T 3rhz_A 289 KDVEEAIMKVKNVN----EDEYIELVKNVRSFNPILRKGFFTRRL 329 (339)
T ss_dssp SSHHHHHHHHHHCC----HHHHHHHHHHHHHHTHHHHTTHHHHHH
T ss_pred CCHHHHHHHHHHhC----HHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 36888888888764 346778888774 3556666655443
No 33
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.80 E-value=5.8e-18 Score=180.92 Aligned_cols=230 Identities=14% Similarity=0.055 Sum_probs=158.4
Q ss_pred HHHHH-HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHH
Q 007224 310 WMKAG-ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLL 387 (612)
Q Consensus 310 ~~k~~-~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 387 (612)
..+.. -..+|.++++|+..++.+.+ .|++.+ ++.++.|.+ |...+.+... +.....
T Consensus 158 ~~r~~~~~~a~~~~~~se~~~~~l~~---~G~~~~------ki~vvGn~~~d~~~~~~~~~-------------~~~~~~ 215 (396)
T 3dzc_A 158 GNRKLTAALTQYHFAPTDTSRANLLQ---ENYNAE------NIFVTGNTVIDALLAVREKI-------------HTDMDL 215 (396)
T ss_dssp HHHHHHHHTCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHHHHH-------------HHCHHH
T ss_pred HHHHHHHHhcCEEECCCHHHHHHHHH---cCCCcC------cEEEECCcHHHHHHHhhhhc-------------ccchhh
Confidence 34444 35789999999999999986 788765 788998854 4322211000 000111
Q ss_pred HHHHHHHhC-CCCCCCCcEEEEEcCccc-ccCHHHHHHHHHhccc--CCcEEEEE-eCCchhHHHHHHHHHHHCCCceEE
Q 007224 388 KEALQAEVG-LPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARG 462 (612)
Q Consensus 388 k~~l~~~~g-l~~~~~~~~il~iGrl~~-~Kg~d~ll~a~~~l~~--~~~~lviv-G~g~~~~~~~l~~l~~~~~~~i~~ 462 (612)
++.+++++| ++.+ +..++++.+|.+. .|+++.+++|+.++.+ +++++++. |.+ +...+.++++... ..++..
T Consensus 216 ~~~~r~~lg~l~~~-~~~vlv~~hR~~~~~~~~~~ll~A~~~l~~~~~~~~~v~~~g~~-~~~~~~l~~~~~~-~~~v~~ 292 (396)
T 3dzc_A 216 QATLESQFPMLDAS-KKLILVTGHRRESFGGGFERICQALITTAEQHPECQILYPVHLN-PNVREPVNKLLKG-VSNIVL 292 (396)
T ss_dssp HHHHHHTCTTCCTT-SEEEEEECSCBCCCTTHHHHHHHHHHHHHHHCTTEEEEEECCBC-HHHHHHHHHHTTT-CTTEEE
T ss_pred HHHHHHHhCccCCC-CCEEEEEECCcccchhHHHHHHHHHHHHHHhCCCceEEEEeCCC-hHHHHHHHHHHcC-CCCEEE
Confidence 367788888 4432 2234445557543 4789999999999865 78999885 544 3355566654322 234666
Q ss_pred EeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCceEEEecccccccCCCCCCCHH
Q 007224 463 VAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 463 ~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~ 541 (612)
...........+|+.||++|.+| |.+++|||++|+|+|++ +.++..|++.+| +++++ . .|++
T Consensus 293 ~~~lg~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~G~PvV~~~~~~~~~e~v~~G-~~~lv----------~-~d~~ 355 (396)
T 3dzc_A 293 IEPQQYLPFVYLMDRAHIILTDS-----GGIQEEAPSLGKPVLVMRETTERPEAVAAG-TVKLV----------G-TNQQ 355 (396)
T ss_dssp ECCCCHHHHHHHHHHCSEEEESC-----SGGGTTGGGGTCCEEECCSSCSCHHHHHHT-SEEEC----------T-TCHH
T ss_pred eCCCCHHHHHHHHHhcCEEEECC-----ccHHHHHHHcCCCEEEccCCCcchHHHHcC-ceEEc----------C-CCHH
Confidence 55555455668999999999998 34449999999999999 688888988877 56764 4 4899
Q ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 007224 542 AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 542 ~la~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~ 585 (612)
++++++.+++++ ++.+.+|++++ ..|.....+++..++++
T Consensus 356 ~l~~ai~~ll~d--~~~~~~m~~~~--~~~~~~~aa~ri~~~l~ 395 (396)
T 3dzc_A 356 QICDALSLLLTD--PQAYQAMSQAH--NPYGDGKACQRIADILA 395 (396)
T ss_dssp HHHHHHHHHHHC--HHHHHHHHTSC--CTTCCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHcC--HHHHHHHhhcc--CCCcCChHHHHHHHHHh
Confidence 999999999998 77777777653 45777777777776654
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.80 E-value=1.1e-17 Score=179.20 Aligned_cols=226 Identities=12% Similarity=0.072 Sum_probs=159.9
Q ss_pred HHHHH-HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCC-CccCccCCCCccccccccCcchhhcchHHHH
Q 007224 311 MKAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNG-MDVQEWNPLTDKYIGVKYDASTVMDAKPLLK 388 (612)
Q Consensus 311 ~k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ng-vd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k 388 (612)
.+..+ ..+|.+++.|+..++.+.+ .|++.+ ++.++.|. +|...+.+.... +
T Consensus 162 ~r~~~~~~a~~~~~~se~~~~~l~~---~Gi~~~------~i~vvGn~~~D~~~~~~~~~~------------------~ 214 (403)
T 3ot5_A 162 NRQLTGVMADIHFSPTKQAKENLLA---EGKDPA------TIFVTGNTAIDALKTTVQKDY------------------H 214 (403)
T ss_dssp HHHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCHHHHHHHHHSCTTC------------------C
T ss_pred HHHHHHHhcCEEECCCHHHHHHHHH---cCCCcc------cEEEeCCchHHHHHhhhhhhc------------------c
Confidence 34433 3589999999999999986 787765 88999884 564433222100 0
Q ss_pred HHHHHHhCCCCCCCCcEEEEEcCccc-ccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEec
Q 007224 389 EALQAEVGLPVDRNIPVIGFIGRLEE-QKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 389 ~~l~~~~gl~~~~~~~~il~iGrl~~-~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
...++++ + ++..++++.||.+. .|+++.+++|+.++.+ +++++++.+...+...+.++++.... .++.....
T Consensus 215 ~~~~~~l--~--~~~~vlv~~~r~~~~~~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~~~~~l~~~~~~~-~~v~l~~~ 289 (403)
T 3ot5_A 215 HPILENL--G--DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNPAVREKAMAILGGH-ERIHLIEP 289 (403)
T ss_dssp CHHHHSC--T--TCEEEEECCCCHHHHTTHHHHHHHHHHHHHHHCTTEEEEEECCSCHHHHHHHHHHHTTC-TTEEEECC
T ss_pred hHHHHhc--c--CCCEEEEEeCcccccCcHHHHHHHHHHHHHHhCCCceEEEecCCCHHHHHHHHHHhCCC-CCEEEeCC
Confidence 1223333 2 23345666778754 4778999999999865 78999987433333555666543222 35666666
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEc-CCCCcccceecCceEEEecccccccCCCCCCCHHHHH
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVA-STGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 544 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s-~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la 544 (612)
........+|+.||++|.+| |...+|||++|+|+|+. +.++..|.+..| +|+++ .+ |+++++
T Consensus 290 l~~~~~~~l~~~ad~vv~~S-----Gg~~~EA~a~g~PvV~~~~~~~~~e~v~~g-~~~lv----------~~-d~~~l~ 352 (403)
T 3ot5_A 290 LDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAG-TLKLI----------GT-NKENLI 352 (403)
T ss_dssp CCHHHHHHHHHHEEEEEECC-----HHHHHHGGGTTCCEEECCSSCSCHHHHHHT-SEEEC----------CS-CHHHHH
T ss_pred CCHHHHHHHHHhcCEEEECC-----ccHHHHHHHhCCCEEEecCCCcchhheeCC-cEEEc----------CC-CHHHHH
Confidence 66667778999999999888 55669999999999999 678888888766 78875 44 999999
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 007224 545 TTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 545 ~~l~~ll~~~~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~ 589 (612)
+++.+++++ ++.+.+|+++ ...|.....+++..+++.+.+.
T Consensus 353 ~ai~~ll~~--~~~~~~m~~~--~~~~g~~~aa~rI~~~l~~~l~ 393 (403)
T 3ot5_A 353 KEALDLLDN--KESHDKMAQA--ANPYGDGFAANRILAAIKSHFE 393 (403)
T ss_dssp HHHHHHHHC--HHHHHHHHHS--CCTTCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcC--HHHHHHHHhh--cCcccCCcHHHHHHHHHHHHhC
Confidence 999999998 7777777654 3457777777888887777664
No 35
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.78 E-value=3.4e-18 Score=182.77 Aligned_cols=159 Identities=16% Similarity=0.074 Sum_probs=118.8
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
..++++.|++. .++.+.+.++++.+.+.++++++++.+.. ..+.++ +.+.++...... + ...+++.||++|
T Consensus 243 ~~vlv~~G~~~-~~~~~~~~~~~~~l~~~~~~~~~~~g~~~-~~~~l~----~~~~~v~~~~~~--~-~~~~l~~ad~~v 313 (412)
T 3otg_A 243 PLVYLTLGTSS-GGTVEVLRAAIDGLAGLDADVLVASGPSL-DVSGLG----EVPANVRLESWV--P-QAALLPHVDLVV 313 (412)
T ss_dssp CEEEEECTTTT-CSCHHHHHHHHHHHHTSSSEEEEECCSSC-CCTTCC----CCCTTEEEESCC--C-HHHHGGGCSEEE
T ss_pred CEEEEEcCCCC-cCcHHHHHHHHHHHHcCCCEEEEEECCCC-Chhhhc----cCCCcEEEeCCC--C-HHHHHhcCcEEE
Confidence 35678889986 78888888888887666788887776542 111121 234456666544 2 456999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHHhhCH
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATYGT 556 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~~~~~ 556 (612)
.++ .+.+++|||++|+|+|+...+ +..+.+.+.++|+++ ++. |+++++++|.+++++ +
T Consensus 314 ~~~----g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~~g~g~~~----------~~~~~~~~~l~~ai~~ll~~--~ 377 (412)
T 3otg_A 314 HHG----GSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQAGAGDHL----------LPDNISPDSVSGAAKRLLAE--E 377 (412)
T ss_dssp ESC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEEC----------CGGGCCHHHHHHHHHHHHHC--H
T ss_pred ECC----chHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHHHHHHHHhC--H
Confidence 765 348999999999999996654 467888888899987 665 899999999999998 5
Q ss_pred HHHHHHHHHH--HHhcCCcHHHHHHHHHHHHH
Q 007224 557 QALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 557 ~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~ 586 (612)
+.+.+|++.+ +.+.++|+.+++.+++++.+
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 409 (412)
T 3otg_A 378 SYRAGARAVAAEIAAMPGPDEVVRLLPGFASR 409 (412)
T ss_dssp HHHHHHHHHHHHHHHSCCHHHHHTTHHHHHC-
T ss_pred HHHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc
Confidence 5666665554 46778999999999998753
No 36
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.69 E-value=7e-15 Score=155.29 Aligned_cols=161 Identities=12% Similarity=0.054 Sum_probs=104.2
Q ss_pred EEEEEcCcccccCHHHHHHHHHhccc-CCcEEEEE-eCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIK-ENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~lviv-G~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
++++.|++...+..+.+.+++..+.. .+++++++ |.+. .+ .+.+...+.+.++... .|.. .++++|+.||++|
T Consensus 183 ilv~gGs~g~~~~~~~~~~al~~l~~~~~~~vi~~~G~~~--~~-~~~~~~~~~~~~~~v~-~f~~-dm~~~l~~aDlvI 257 (365)
T 3s2u_A 183 LLVLGGSLGAEPLNKLLPEALAQVPLEIRPAIRHQAGRQH--AE-ITAERYRTVAVEADVA-PFIS-DMAAAYAWADLVI 257 (365)
T ss_dssp EEECCTTTTCSHHHHHHHHHHHTSCTTTCCEEEEECCTTT--HH-HHHHHHHHTTCCCEEE-SCCS-CHHHHHHHCSEEE
T ss_pred EEEECCcCCccccchhhHHHHHhcccccceEEEEecCccc--cc-cccceecccccccccc-cchh-hhhhhhccceEEE
Confidence 45556788888888999999999865 45665543 4333 33 3333444455444443 3433 3557999999999
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCCc--------ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGGL--------VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg~--------~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
.-+ -++++.|+|++|+|+|....+.. .+.+.+.+.|+++ .-+..++++|+++|.++++|
T Consensus 258 ~ra----G~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~G~a~~l--------~~~~~~~~~L~~~i~~ll~d- 324 (365)
T 3s2u_A 258 CRA----GALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRSGAGRLL--------PQKSTGAAELAAQLSEVLMH- 324 (365)
T ss_dssp ECC----CHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTTTSEEEC--------CTTTCCHHHHHHHHHHHHHC-
T ss_pred ecC----CcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHCCCEEEe--------ecCCCCHHHHHHHHHHHHCC-
Confidence 533 36899999999999998765432 2345556678876 11233689999999999998
Q ss_pred CHHHHHHHHHHHHH--hcCCcHHHHHHHHHHH
Q 007224 555 GTQALAEMMKNGMA--QDLSWKGPAKKWEETL 584 (612)
Q Consensus 555 ~~~~~~~~~~~~~~--~~~sw~~~a~~~~~~y 584 (612)
++.+++|++++.. .....+.+++.++++.
T Consensus 325 -~~~~~~m~~~a~~~~~~~aa~~ia~~i~~la 355 (365)
T 3s2u_A 325 -PETLRSMADQARSLAKPEATRTVVDACLEVA 355 (365)
T ss_dssp -THHHHHHHHHHHHTCCTTHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 7788889887743 2233444444444443
No 37
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.65 E-value=6.6e-15 Score=158.43 Aligned_cols=161 Identities=13% Similarity=0.073 Sum_probs=110.3
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhccc-CCcEE-EEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcC
Q 007224 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIK-ENVQI-IVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGAD 479 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~d~ll~a~~~l~~-~~~~l-vivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ad 479 (612)
+.++++++|++. .++.+.+.++++.+.+ +++++ +++|.+... +.++ +.+.++......+.. .+|+.||
T Consensus 232 ~~~v~v~~Gs~~-~~~~~~~~~~~~~l~~~~~~~~~~~~G~~~~~--~~l~----~~~~~v~~~~~~~~~---~~l~~ad 301 (430)
T 2iyf_A 232 EKVVLVSLGSAF-TKQPAFYRECVRAFGNLPGWHLVLQIGRKVTP--AELG----ELPDNVEVHDWVPQL---AILRQAD 301 (430)
T ss_dssp SEEEEEECTTTC-C-CHHHHHHHHHHHTTCTTEEEEEECC---CG--GGGC----SCCTTEEEESSCCHH---HHHTTCS
T ss_pred CCeEEEEcCCCC-CCcHHHHHHHHHHHhcCCCeEEEEEeCCCCCh--HHhc----cCCCCeEEEecCCHH---HHhhccC
Confidence 346788899998 5666666555555544 57888 467876521 1221 244557666544443 5899999
Q ss_pred EEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHHh
Q 007224 480 FILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 480 i~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~~ 553 (612)
++|..+ -+++++|||++|+|+|+...++ ..+.+.+.+.|+.+ ++. |+++++++|.+++++
T Consensus 302 ~~v~~~----G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~ 367 (430)
T 2iyf_A 302 LFVTHA----GAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKL----------ATEEATADLLRETALALVDD 367 (430)
T ss_dssp EEEECC----CHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CCC-CCHHHHHHHHHHHHHC
T ss_pred EEEECC----CccHHHHHHHhCCCEEECCCccchHHHHHHHHHcCCEEEc----------CCCCCCHHHHHHHHHHHHcC
Confidence 999754 2379999999999999998765 45667777789976 555 899999999999987
Q ss_pred hCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLNLE 588 (612)
Q Consensus 554 ~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~l~ 588 (612)
++.++++++.+ +.+.++++.+++.+++++.+..
T Consensus 368 --~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 402 (430)
T 2iyf_A 368 --PEVARRLRRIQAEMAQEGGTRRAADLIEAELPARH 402 (430)
T ss_dssp --HHHHHHHHHHHHHHHHHCHHHHHHHHHHTTSCC--
T ss_pred --HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHhhccc
Confidence 55455555443 3456799999998888876543
No 38
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.65 E-value=1.4e-15 Score=162.12 Aligned_cols=153 Identities=14% Similarity=0.115 Sum_probs=99.4
Q ss_pred CCcEEEEEcCccccc----------CHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHH
Q 007224 402 NIPVIGFIGRLEEQK----------GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLA 471 (612)
Q Consensus 402 ~~~~il~iGrl~~~K----------g~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~ 471 (612)
..++++++|++...| .++.+++++.++ ++++++++.+.. .+.++ +.+.++......+ .
T Consensus 227 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~---~ 294 (398)
T 4fzr_A 227 QPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKL---GFEVVVAVSDKL--AQTLQ----PLPEGVLAAGQFP---L 294 (398)
T ss_dssp SCEEECC----------------CCSHHHHHHHGGGG---TCEEEECCCC--------------CCTTEEEESCCC---H
T ss_pred CCEEEEEccCcccccccccccchHHHHHHHHHHHHhC---CCEEEEEeCCcc--hhhhc----cCCCcEEEeCcCC---H
Confidence 345777889996544 466666666655 789999887652 22232 3455676665543 3
Q ss_pred HHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEE----cCCCCcccceecCceEEEecccccccCCCCCC--CHHHHHH
Q 007224 472 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVST 545 (612)
Q Consensus 472 ~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~ 545 (612)
..+++.||++|. ++.+.+++|||++|+|+|+ .+..+..+.+.+.+.|+++ ++. |++++++
T Consensus 295 ~~ll~~ad~~v~----~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~ 360 (398)
T 4fzr_A 295 SAIMPACDVVVH----HGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHAAGAGVEV----------PWEQAGVESVLA 360 (398)
T ss_dssp HHHGGGCSEEEE----CCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHTTSEEEC----------C-------CHHH
T ss_pred HHHHhhCCEEEe----cCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHHcCCEEec----------CcccCCHHHHHH
Confidence 568999999994 4557899999999999999 4555777888888899986 555 7899999
Q ss_pred HHHHHHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHH
Q 007224 546 TVRRALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEE 582 (612)
Q Consensus 546 ~l~~ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~ 582 (612)
+|.+++++ ++.+++|.+.+ +.+..+|+.+++.+++
T Consensus 361 ai~~ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (398)
T 4fzr_A 361 ACARIRDD--SSYVGNARRLAAEMATLPTPADIVRLIEQ 397 (398)
T ss_dssp HHHHHHHC--THHHHHHHHHHHHHTTSCCHHHHHHHHTC
T ss_pred HHHHHHhC--HHHHHHHHHHHHHHHcCCCHHHHHHHHhc
Confidence 99999998 45555555444 4677899988887653
No 39
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.59 E-value=1.1e-14 Score=154.64 Aligned_cols=158 Identities=14% Similarity=0.134 Sum_probs=108.3
Q ss_pred CcEEEEEcCcccccCH-HHHHHHHHhccc-CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 403 IPVIGFIGRLEEQKGS-DILAAAIPHFIK-ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~-d~ll~a~~~l~~-~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
..++++.|++...|+. ..+++++.+..+ +++++++++.+.. .+.++ ..+.++......+.. .+++.||+
T Consensus 219 ~~vlv~~G~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~~~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~ad~ 289 (391)
T 3tsa_A 219 RRVCICMGRMVLNATGPAPLLRAVAAATELPGVEAVIAVPPEH--RALLT----DLPDNARIAESVPLN---LFLRTCEL 289 (391)
T ss_dssp EEEEEECCHHHHHHHCSHHHHHHHHHHHTSTTEEEEEECCGGG--GGGCT----TCCTTEEECCSCCGG---GTGGGCSE
T ss_pred CEEEEEcCCCCCcccchHHHHHHHHHhccCCCeEEEEEECCcc--hhhcc----cCCCCEEEeccCCHH---HHHhhCCE
Confidence 3466667998765433 555555444433 5899999987652 11221 234456655444432 36799999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEc----CCCCcccceecCceEEEecccccccCCCCC----CCHHHHHHHHHHHHH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDP----VDVAAVSTTVRRALA 552 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~----~d~~~la~~l~~ll~ 552 (612)
+|. ++.+.+++|||++|+|+|+. +..+..+.+.+.+.|+++ ++ .|+++++++|.++++
T Consensus 290 ~v~----~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 290 VIC----AGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAAAGAGICL----------PDEQAQSDHEQFTDSIATVLG 355 (391)
T ss_dssp EEE----CCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTTSEEEC----------CSHHHHTCHHHHHHHHHHHHT
T ss_pred EEe----CCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHHcCCEEec----------CcccccCCHHHHHHHHHHHHc
Confidence 995 44557999999999999994 445567778888899986 66 689999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 553 ~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~ 585 (612)
+ ++.+++|.+.+ +.+..+++.+++.+++++.
T Consensus 356 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 388 (391)
T 3tsa_A 356 D--TGFAAAAIKLSDEITAMPHPAALVRTLENTAA 388 (391)
T ss_dssp C--THHHHHHHHHHHHHHTSCCHHHHHHHHHHC--
T ss_pred C--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHh
Confidence 8 44444454433 5677899998888877653
No 40
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.56 E-value=4.8e-13 Score=141.94 Aligned_cols=157 Identities=15% Similarity=0.064 Sum_probs=106.2
Q ss_pred CCcEEEEEcCccccc--CHHHHHHHHHhcccCCcEEEE-EeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 402 NIPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~il~iGrl~~~K--g~d~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
...++++.|+....+ .+..+++++..+ ++++++ +|.+.. .+.++ +.+.++......+.. ++++.|
T Consensus 231 ~~~v~v~~G~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~--~~~~~----~~~~~v~~~~~~~~~---~ll~~a 298 (402)
T 3ia7_A 231 APVLLVSLGNQFNEHPEFFRACAQAFADT---PWHVVMAIGGFLD--PAVLG----PLPPNVEAHQWIPFH---SVLAHA 298 (402)
T ss_dssp CCEEEEECCSCSSCCHHHHHHHHHHHTTS---SCEEEEECCTTSC--GGGGC----SCCTTEEEESCCCHH---HHHTTE
T ss_pred CCEEEEECCCCCcchHHHHHHHHHHHhcC---CcEEEEEeCCcCC--hhhhC----CCCCcEEEecCCCHH---HHHhhC
Confidence 345677889887654 344444444443 477666 555431 11111 234556665544443 699999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEc-----CCCCcccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVA-----STGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s-----~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll 551 (612)
|++|..+- ..+++|||++|+|+|+. +..+..+.+.+.+.|..+ .+. +++++++++.+++
T Consensus 299 d~~v~~~G----~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~~~~ll 364 (402)
T 3ia7_A 299 RACLTHGT----TGAVLEAFAAGVPLVLVPHFATEAAPSAERVIELGLGSVL----------RPDQLEPASIREAVERLA 364 (402)
T ss_dssp EEEEECCC----HHHHHHHHHTTCCEEECGGGCGGGHHHHHHHHHTTSEEEC----------CGGGCSHHHHHHHHHHHH
T ss_pred CEEEECCC----HHHHHHHHHhCCCEEEeCCCcccHHHHHHHHHHcCCEEEc----------cCCCCCHHHHHHHHHHHH
Confidence 99996542 37889999999999954 445677777888889876 554 8999999999999
Q ss_pred HhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHH
Q 007224 552 ATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 552 ~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~ 586 (612)
++ ++.+.++.+.+ +.+..+++..++.+++++.+
T Consensus 365 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 399 (402)
T 3ia7_A 365 AD--SAVRERVRRMQRDILSSGGPARAADEVEAYLGR 399 (402)
T ss_dssp HC--HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred cC--HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHhh
Confidence 98 44444444333 46778899999988888764
No 41
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.54 E-value=1.8e-13 Score=145.67 Aligned_cols=153 Identities=13% Similarity=0.086 Sum_probs=108.7
Q ss_pred CcEEEEEcCcccc-cCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 403 IPVIGFIGRLEEQ-KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 403 ~~~il~iGrl~~~-Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
.++++++|++... ++.+.+.++++.+.+.++++++++.+.. .+.++ ..+.++......+ ...+++.||++
T Consensus 233 ~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--~~~l~----~~~~~v~~~~~~~---~~~ll~~ad~~ 303 (398)
T 3oti_A 233 PEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--ISPLG----TLPRNVRAVGWTP---LHTLLRTCTAV 303 (398)
T ss_dssp CEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--CGGGC----SCCTTEEEESSCC---HHHHHTTCSEE
T ss_pred CEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--hhhhc----cCCCcEEEEccCC---HHHHHhhCCEE
Confidence 3577778999655 4656665555555545899999987753 11111 2455676665543 34589999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEE----cCCCCcc--cceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHHh
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIV----ASTGGLV--DTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALAT 553 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~----s~~gg~~--e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~~ 553 (612)
|. .+.+.+++|||++|+|+|+ .+..+.. +.+.+.+.|+.+ ++. +.++++ +++++
T Consensus 304 v~----~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~~g~g~~~----------~~~~~~~~~l~----~ll~~ 365 (398)
T 3oti_A 304 VH----HGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSRRGIGLVS----------TSDKVDADLLR----RLIGD 365 (398)
T ss_dssp EE----CCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHHHTSEEEC----------CGGGCCHHHHH----HHHHC
T ss_pred EE----CCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHHCCCEEee----------CCCCCCHHHHH----HHHcC
Confidence 95 4456799999999999999 6678888 999988899986 544 566665 78887
Q ss_pred hCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHH
Q 007224 554 YGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 554 ~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y 584 (612)
+..+++|.+.+ +....+|+.+++.+++++
T Consensus 366 --~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 366 --ESLRTAAREVREEMVALPTPAETVRRIVERI 396 (398)
T ss_dssp --HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 55555555444 567889999999888765
No 42
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.46 E-value=5.2e-12 Score=134.93 Aligned_cols=157 Identities=14% Similarity=0.032 Sum_probs=104.4
Q ss_pred CCcEEEEEcCccccc--CHHHHHHHHHhcccCCcEEEE-EeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 402 NIPVIGFIGRLEEQK--GSDILAAAIPHFIKENVQIIV-LGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 402 ~~~~il~iGrl~~~K--g~d~ll~a~~~l~~~~~~lvi-vG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
...++++.|+..... .+..+++++.++ ++++++ +|.+.. .+.++ ..+.++......+.. .+++.|
T Consensus 247 ~~~v~v~~Gs~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~--~~~l~----~~~~~v~~~~~~~~~---~ll~~a 314 (415)
T 3rsc_A 247 LPVVLVSLGTTFNDRPGFFRDCARAFDGQ---PWHVVMTLGGQVD--PAALG----DLPPNVEAHRWVPHV---KVLEQA 314 (415)
T ss_dssp CCEEEEECTTTSCCCHHHHHHHHHHHTTS---SCEEEEECTTTSC--GGGGC----CCCTTEEEESCCCHH---HHHHHE
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHhcC---CcEEEEEeCCCCC--hHHhc----CCCCcEEEEecCCHH---HHHhhC
Confidence 345677788876433 244445554444 488877 565431 11111 234556665444433 589999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEc----CCCCcccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVA----STGGLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s----~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~ 552 (612)
|++|..+ -..+++|||++|+|+|+. +.....+.+.+.+.|..+ .+. ++++++++|.++++
T Consensus 315 d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~ 380 (415)
T 3rsc_A 315 TVCVTHG----GMGTLMEALYWGRPLVVVPQSFDVQPMARRVDQLGLGAVL----------PGEKADGDTLLAAVGAVAA 380 (415)
T ss_dssp EEEEESC----CHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHHHTCEEEC----------CGGGCCHHHHHHHHHHHHT
T ss_pred CEEEECC----cHHHHHHHHHhCCCEEEeCCcchHHHHHHHHHHcCCEEEc----------ccCCCCHHHHHHHHHHHHc
Confidence 9999654 236889999999999994 444566777777788876 544 89999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLLN 586 (612)
Q Consensus 553 ~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~~ 586 (612)
+ ++.++++.+.+ +.+..+++..++.+++++.+
T Consensus 381 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 414 (415)
T 3rsc_A 381 D--PALLARVEAMRGHVRRAGGAARAADAVEAYLAR 414 (415)
T ss_dssp C--HHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhc
Confidence 8 44444444333 45678888888888877653
No 43
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.45 E-value=1.4e-11 Score=130.18 Aligned_cols=153 Identities=13% Similarity=0.109 Sum_probs=105.3
Q ss_pred CcEEEEEcCcccc-------cCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH
Q 007224 403 IPVIGFIGRLEEQ-------KGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII 475 (612)
Q Consensus 403 ~~~il~iGrl~~~-------Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l 475 (612)
..+++++|++... +.++.+++++.++ ++++++++.+. ..+.++. .+.++.. ...+. .+++
T Consensus 211 ~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~--~~~~l~~----~~~~v~~-~~~~~---~~~l 277 (384)
T 2p6p_A 211 QRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRW---DVELIVAAPDT--VAEALRA----EVPQARV-GWTPL---DVVA 277 (384)
T ss_dssp CEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTT---TCEEEEECCHH--HHHHHHH----HCTTSEE-ECCCH---HHHG
T ss_pred CEEEEECCCCCccccccccHHHHHHHHHHHhcC---CcEEEEEeCCC--CHHhhCC----CCCceEE-cCCCH---HHHH
Confidence 3578889999865 6778888888765 78888876533 2223322 3445665 44332 3588
Q ss_pred HhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHH
Q 007224 476 AGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRR 549 (612)
Q Consensus 476 ~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ 549 (612)
+.||++|..+ .+++++|||++|+|+|+...++ ..+.+.+.+.|+.+ ++. +.++++++|.+
T Consensus 278 ~~~d~~v~~~----G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~~g~g~~~----------~~~~~~~~~l~~~i~~ 343 (384)
T 2p6p_A 278 PTCDLLVHHA----GGVSTLTGLSAGVPQLLIPKGSVLEAPARRVADYGAAIAL----------LPGEDSTEAIADSCQE 343 (384)
T ss_dssp GGCSEEEECS----CTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTCCCHHHHHHHHHH
T ss_pred hhCCEEEeCC----cHHHHHHHHHhCCCEEEccCcccchHHHHHHHHCCCeEec----------CcCCCCHHHHHHHHHH
Confidence 9999999753 4568999999999999998754 66667777789876 443 79999999999
Q ss_pred HHHhhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHH
Q 007224 550 ALATYGTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 550 ll~~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y 584 (612)
++++ ++.++++.+.+ +...-.-+.+++.+++++
T Consensus 344 ll~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 378 (384)
T 2p6p_A 344 LQAK--DTYARRAQDLSREISGMPLPATVVTALEQLA 378 (384)
T ss_dssp HHHC--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHcC--HHHHHHHHHHHHHHHhCCCHHHHHHHHHHHh
Confidence 9998 44444544433 344445566666555554
No 44
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=99.44 E-value=2e-12 Score=137.21 Aligned_cols=194 Identities=20% Similarity=0.150 Sum_probs=133.0
Q ss_pred HHHH-HhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCC-ccCccCCCCccccccccCcchhhcchHHHHH
Q 007224 312 KAGI-LESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGM-DVQEWNPLTDKYIGVKYDASTVMDAKPLLKE 389 (612)
Q Consensus 312 k~~~-~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngv-d~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~ 389 (612)
+..+ ..+|.+++.++..++.+.+ .|++.+ ++.++.|.+ |...+. .....+.
T Consensus 140 R~~~~~~a~~~~~~te~~~~~l~~---~G~~~~------~I~vtGnp~~D~~~~~------------------~~~~~~~ 192 (385)
T 4hwg_A 140 RKIIDHISDVNITLTEHARRYLIA---EGLPAE------LTFKSGSHMPEVLDRF------------------MPKILKS 192 (385)
T ss_dssp HHHHHHHCSEEEESSHHHHHHHHH---TTCCGG------GEEECCCSHHHHHHHH------------------HHHHHHC
T ss_pred HHHHHhhhceeecCCHHHHHHHHH---cCCCcC------cEEEECCchHHHHHHh------------------hhhcchh
Confidence 3343 4689999999999999986 787765 788888743 422110 0112345
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcc---cccCHHHHHHHHHhcccC-CcEEEEEeCCchhHHHHHHHH-H-HHCCCceEEE
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLE---EQKGSDILAAAIPHFIKE-NVQIIVLGTGKKPMEKQLEQL-E-ILYPEKARGV 463 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~---~~Kg~d~ll~a~~~l~~~-~~~lvivG~g~~~~~~~l~~l-~-~~~~~~i~~~ 463 (612)
.+++++|++. +..+++..+|.+ ..|+++.+++|+.++.+. ++++++... +...+.++++ . .....++...
T Consensus 193 ~~~~~lgl~~--~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~--p~~~~~l~~~~~~~~~~~~v~l~ 268 (385)
T 4hwg_A 193 DILDKLSLTP--KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTH--PRTKKRLEDLEGFKELGDKIRFL 268 (385)
T ss_dssp CHHHHTTCCT--TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEEC--HHHHHHHHTSGGGGGTGGGEEEC
T ss_pred HHHHHcCCCc--CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECC--hHHHHHHHHHHHHhcCCCCEEEE
Confidence 6788899864 335566677754 347899999999988543 677777543 3345555544 1 1112346554
Q ss_pred eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC-cccceecCceEEEecccccccCCCCCCCHHH
Q 007224 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG-LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAA 542 (612)
Q Consensus 464 ~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg-~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~ 542 (612)
..+.......+++.||+++.+| |.++.||+++|+|+|+..... ..|.+..| +++++ . .|.++
T Consensus 269 ~~lg~~~~~~l~~~adlvvt~S-----Ggv~~EA~alG~Pvv~~~~~ter~e~v~~G-~~~lv----------~-~d~~~ 331 (385)
T 4hwg_A 269 PAFSFTDYVKLQMNAFCILSDS-----GTITEEASILNLPALNIREAHERPEGMDAG-TLIMS----------G-FKAER 331 (385)
T ss_dssp CCCCHHHHHHHHHHCSEEEECC-----TTHHHHHHHTTCCEEECSSSCSCTHHHHHT-CCEEC----------C-SSHHH
T ss_pred cCCCHHHHHHHHHhCcEEEECC-----ccHHHHHHHcCCCEEEcCCCccchhhhhcC-ceEEc----------C-CCHHH
Confidence 4455555678999999999776 567899999999999986543 56777666 66654 3 48999
Q ss_pred HHHHHHHHHHh
Q 007224 543 VSTTVRRALAT 553 (612)
Q Consensus 543 la~~l~~ll~~ 553 (612)
+++++.+++++
T Consensus 332 i~~ai~~ll~d 342 (385)
T 4hwg_A 332 VLQAVKTITEE 342 (385)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhC
Confidence 99999999987
No 45
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.25 E-value=1.6e-10 Score=124.65 Aligned_cols=154 Identities=16% Similarity=0.083 Sum_probs=105.8
Q ss_pred cEEEEEcCccc-----ccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 404 PVIGFIGRLEE-----QKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 404 ~~il~iGrl~~-----~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
.++++.|++.. .|.++.+++++.++ ++++++.+.+.. .+.++ ..+.++......+. ..++..|
T Consensus 269 ~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~--~~~l~----~~~~~v~~~~~~~~---~~ll~~a 336 (441)
T 2yjn_A 269 RVCLTLGISSRENSIGQVSIEELLGAVGDV---DAEIIATFDAQQ--LEGVA----NIPDNVRTVGFVPM---HALLPTC 336 (441)
T ss_dssp EEEEEC----------CCSTTTTHHHHHTS---SSEEEECCCTTT--TSSCS----SCCSSEEECCSCCH---HHHGGGC
T ss_pred EEEEECCCCcccccChHHHHHHHHHHHHcC---CCEEEEEECCcc--hhhhc----cCCCCEEEecCCCH---HHHHhhC
Confidence 47788899875 48888999998876 688888766542 11111 23445665544443 3478999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALA 552 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~ 552 (612)
|++|.. +.+.+++|||++|+|+|+....+ ..+.+.+.+.|+.+ ++. ++++++++|.++++
T Consensus 337 d~~V~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~ 402 (441)
T 2yjn_A 337 AATVHH----GGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQEFGAGIAL----------PVPELTPDQLRESVKRVLD 402 (441)
T ss_dssp SEEEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHHTSEEEC----------CTTTCCHHHHHHHHHHHHH
T ss_pred CEEEEC----CCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHHcCCEEEc----------ccccCCHHHHHHHHHHHhc
Confidence 999963 44579999999999999998743 55667777789876 443 89999999999999
Q ss_pred hhCHHHHHHHHHHH--HHhcCCcHHHHHHHHHHHH
Q 007224 553 TYGTQALAEMMKNG--MAQDLSWKGPAKKWEETLL 585 (612)
Q Consensus 553 ~~~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y~ 585 (612)
+ ++.++++.+.+ +......+.+++.+++++.
T Consensus 403 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 403 D--PAHRAGAARMRDDMLAEPSPAEVVGICEELAA 435 (441)
T ss_dssp C--HHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHH
Confidence 8 54445554433 4567788888887777653
No 46
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=99.11 E-value=8.3e-09 Score=110.47 Aligned_cols=157 Identities=10% Similarity=0.003 Sum_probs=98.7
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEE-EEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQII-VLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lv-ivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
...++++.|+.. .+..+.+.+++..+.+.+++++ ++|.+... +.+ ...+.++......+.. .+++.||+
T Consensus 255 ~~~v~v~~Gs~~-~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--~~~----~~~~~~v~~~~~~~~~---~~l~~~d~ 324 (424)
T 2iya_A 255 RPVLLIALGSAF-TDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP--ADL----GEVPPNVEVHQWVPQL---DILTKASA 324 (424)
T ss_dssp CCEEEEECCSSS-CCCHHHHHHHHHHHTTCSSEEEEECCTTSCG--GGG----CSCCTTEEEESSCCHH---HHHTTCSE
T ss_pred CCEEEEEcCCCC-cchHHHHHHHHHHHhcCCcEEEEEECCcCCh--HHh----ccCCCCeEEecCCCHH---HHHhhCCE
Confidence 345777789887 4444444444454544577875 46765421 111 1245556655443433 58999999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHHHhh
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRALATY 554 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll~~~ 554 (612)
+|.. +-.++++|||++|+|+|+....+ ..+.+.+.+.|+.+ +.. +.++++++|.+++++
T Consensus 325 ~v~~----~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll~~- 389 (424)
T 2iya_A 325 FITH----AGMGSTMEALSNAVPMVAVPQIAEQTMNAERIVELGLGRHI----------PRDQVTAEKLREAVLAVASD- 389 (424)
T ss_dssp EEEC----CCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHTTSEEEC----------CGGGCCHHHHHHHHHHHHHC-
T ss_pred EEEC----CchhHHHHHHHcCCCEEEecCccchHHHHHHHHHCCCEEEc----------CcCCCCHHHHHHHHHHHHcC-
Confidence 8863 22379999999999999997643 34556666788876 433 899999999999987
Q ss_pred CHHHHHHHHHHH--HHhcCCcHHHHHHHHHHH
Q 007224 555 GTQALAEMMKNG--MAQDLSWKGPAKKWEETL 584 (612)
Q Consensus 555 ~~~~~~~~~~~~--~~~~~sw~~~a~~~~~~y 584 (612)
++.++++.+.+ +......+..++.+++++
T Consensus 390 -~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 420 (424)
T 2iya_A 390 -PGVAERLAAVRQEIREAGGARAAADILEGIL 420 (424)
T ss_dssp -HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 44334333322 334455556666665554
No 47
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=99.06 E-value=2e-08 Score=112.40 Aligned_cols=292 Identities=19% Similarity=0.214 Sum_probs=187.9
Q ss_pred CcEEEEecCCccchHHHHHHHhhc-CCCCC-------CCceEEEEEecCcccc--cCCcccccccCCCc-----------
Q 007224 229 EDVVFVANDWHTSLIPCYLKTMYK-PKGMY-------KSAKVVFCIHNIAYQG--RFAFEDFGLLNLPA----------- 287 (612)
Q Consensus 229 pDvvih~h~~~~~~~~~~l~~~~~-~~~~~-------~~~~vv~~iH~~~~~~--~~~~~~~~~~~l~~----------- 287 (612)
+. +||.||-|.+++..-+-+.+. ..|+- ....++||.|.+...+ +|+...+..+ +|.
T Consensus 360 ~~-~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpealE~wpv~l~~~l-Lpr~~~II~ein~~ 437 (879)
T 1ygp_A 360 QV-AIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEALEKWPRRLFGHL-LPRHLEIIYDINWF 437 (879)
T ss_dssp HE-EEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGSCEEEHHHHHHH-CHHHHHHHHHHHHH
T ss_pred ce-EEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhhccCCHHHHHHH-CCcHHHHHHHHHHH
Confidence 45 999999998876655544331 11110 1247899999876544 3443333221 110
Q ss_pred -------------ccccccccccCCCCCcCCcchhHHHHHHHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEe
Q 007224 288 -------------QFKSSFDFIDGYNKPVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGI 354 (612)
Q Consensus 288 -------------~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI 354 (612)
.....+..++.-. ..+..++-..++..+..|..||.-..+.+.+..... ...+.+..++.-+
T Consensus 438 f~~~~~~~~~~d~~~~~~l~ii~~~~---~~~~v~MA~LAi~~S~~vNGVs~LH~ev~k~~~f~d--f~~l~P~~kf~n~ 512 (879)
T 1ygp_A 438 FLEDVAKKFPKDVDLLSRISIIEENS---PERQIRMAFLAIVGSHKVNGVVELHSELIKTTIFKD--FIKFYGPSKFVNV 512 (879)
T ss_dssp HHHHHHHHSTTCTHHHHHHCSEECCS---SSCEEEHHHHHHHHEEEEEESSHHHHHHHHHTTTHH--HHHHHCGGGEEEC
T ss_pred HHHHHHHHcCCCHHHHHhcceeccCC---CcceeehHHHHHHhcCceeEehHHHHHHHHHHHhHH--HHHhCCCCcccCc
Confidence 0000011011000 002456667788899999999998888875411100 1112222288899
Q ss_pred eCCCccCccC----CCC------------ccccc--------ccc-Cc----chhhcchHHHHHH----HHHHh-CCCCC
Q 007224 355 VNGMDVQEWN----PLT------------DKYIG--------VKY-DA----STVMDAKPLLKEA----LQAEV-GLPVD 400 (612)
Q Consensus 355 ~Ngvd~~~~~----p~~------------~~~~~--------~~~-~~----~~~~~~~~~~k~~----l~~~~-gl~~~ 400 (612)
.|||....|- |.- +.++. .+| +. ..+.+.|..+|.. ++++. |+..+
T Consensus 513 TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld 592 (879)
T 1ygp_A 513 TNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQLEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDII 592 (879)
T ss_dssp CCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGGGGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCS
T ss_pred CCCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEec
Confidence 9999887774 220 00110 001 11 1123344444544 46667 88888
Q ss_pred -----CCCcEEEEEcCcccccCHHH-HHHHHHhccc------------------CCcEEEEEeCCch------hHHHHHH
Q 007224 401 -----RNIPVIGFIGRLEEQKGSDI-LAAAIPHFIK------------------ENVQIIVLGTGKK------PMEKQLE 450 (612)
Q Consensus 401 -----~~~~~il~iGrl~~~Kg~d~-ll~a~~~l~~------------------~~~~lvivG~g~~------~~~~~l~ 450 (612)
++...++++-|+.++|...+ ++..+.++.+ .+.++++.|+..+ .+-+.+-
T Consensus 593 ~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~~~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~ 672 (879)
T 1ygp_A 593 NREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKNMLKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLIN 672 (879)
T ss_dssp CSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHhCccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHH
Confidence 88899999999999999999 6666554421 3688999998653 2333344
Q ss_pred HHHH------HCCC--ceEEEeccChHHHHHHHHhcCEEEeCCCC--CCCcHHHHHHHHcCCceEEcCCCCcccceec--
Q 007224 451 QLEI------LYPE--KARGVAKFNIPLAHMIIAGADFILIPSRF--EPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-- 518 (612)
Q Consensus 451 ~l~~------~~~~--~i~~~~~~~~~~~~~~l~~adi~l~pS~~--E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-- 518 (612)
+++. ...+ ++.++..++..++..++.+||+....|+. |++|+.-+-+|..|.+.|+|-.|..+|+.++
T Consensus 673 ~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG 752 (879)
T 1ygp_A 673 CVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSEHISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIG 752 (879)
T ss_dssp HHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEEECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHC
T ss_pred HHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcC
Confidence 4443 2334 68888899999999999999999999975 9999999999999999999999999999876
Q ss_pred CceEEEecc
Q 007224 519 GFTGFQMGS 527 (612)
Q Consensus 519 g~~G~l~~~ 527 (612)
+.|+|+||.
T Consensus 753 ~eN~fiFG~ 761 (879)
T 1ygp_A 753 EDNVFLFGN 761 (879)
T ss_dssp GGGSEEESC
T ss_pred cccEEEccC
Confidence 569999985
No 48
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=99.02 E-value=8.3e-09 Score=109.18 Aligned_cols=153 Identities=17% Similarity=0.141 Sum_probs=89.5
Q ss_pred cEEEEEcCccccc-CHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEE
Q 007224 404 PVIGFIGRLEEQK-GSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFIL 482 (612)
Q Consensus 404 ~~il~iGrl~~~K-g~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l 482 (612)
.+++..|++...+ +.+.+.+++..+.+.+.++++.+.+... ......+.++......+. ..++..+|++|
T Consensus 239 ~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~------~~~~~~~~~v~~~~~~p~---~~lL~~~~~~v 309 (400)
T 4amg_A 239 RIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDL------ALLGELPANVRVVEWIPL---GALLETCDAII 309 (400)
T ss_dssp EEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCC------CCCCCCCTTEEEECCCCH---HHHHTTCSEEE
T ss_pred EEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccc------cccccCCCCEEEEeecCH---HHHhhhhhhee
Confidence 4566678876544 4455666666666667888877654421 001123455655444443 24789999988
Q ss_pred eCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH-H
Q 007224 483 IPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-Q 557 (612)
Q Consensus 483 ~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~-~ 557 (612)
. .+-.++++|||++|+|+|+....+ ..+.+.+.+.|+.+ +. .+..+++|.++++|+.- +
T Consensus 310 ~----h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~~G~g~~l----------~~--~~~~~~al~~lL~d~~~r~ 373 (400)
T 4amg_A 310 H----HGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTGLGIGFDA----------EA--GSLGAEQCRRLLDDAGLRE 373 (400)
T ss_dssp E----CCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHHHTSEEEC----------CT--TTCSHHHHHHHHHCHHHHH
T ss_pred c----cCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHHCCCEEEc----------CC--CCchHHHHHHHHcCHHHHH
Confidence 4 334578999999999999965443 44556566678765 33 33457889999998321 1
Q ss_pred HHHHHHHHHHHhcCCcHHHHHHHHH
Q 007224 558 ALAEMMKNGMAQDLSWKGPAKKWEE 582 (612)
Q Consensus 558 ~~~~~~~~~~~~~~sw~~~a~~~~~ 582 (612)
..+++++ .++..-+-...++.+++
T Consensus 374 ~a~~l~~-~~~~~~~~~~~a~~le~ 397 (400)
T 4amg_A 374 AALRVRQ-EMSEMPPPAETAAXLVA 397 (400)
T ss_dssp HHHHHHH-HHHTSCCHHHHHHHHHH
T ss_pred HHHHHHH-HHHcCCCHHHHHHHHHH
Confidence 2222222 23343455566655554
No 49
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=98.91 E-value=8.3e-08 Score=102.21 Aligned_cols=125 Identities=13% Similarity=0.082 Sum_probs=84.5
Q ss_pred CcEEEEEcCcc-cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 403 IPVIGFIGRLE-EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 403 ~~~il~iGrl~-~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
.++++..|++. ..+..+.+++++.++ ++++++.+.... .. . ...+.++......+. ..++..||++
T Consensus 222 ~~Vlv~~Gs~~~~~~~~~~~~~al~~~---~~~vv~~~g~~~-~~----~--~~~~~~v~~~~~~~~---~~ll~~~d~~ 288 (404)
T 3h4t_A 222 PPVYVGFGSGPAPAEAARVAIEAVRAQ---GRRVVLSSGWAG-LG----R--IDEGDDCLVVGEVNH---QVLFGRVAAV 288 (404)
T ss_dssp CCEEECCTTSCCCTTHHHHHHHHHHHT---TCCEEEECTTTT-CC----C--SSCCTTEEEESSCCH---HHHGGGSSEE
T ss_pred CeEEEECCCCCCcHHHHHHHHHHHHhC---CCEEEEEeCCcc-cc----c--ccCCCCEEEecCCCH---HHHHhhCcEE
Confidence 46777889987 677778888888776 677777654331 10 0 112445665544443 3478999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCc----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
|..+ -..++.||+++|+|+|+....+- .+.+.+.+.|..+. .+..+.++++++|.++++
T Consensus 289 v~~g----G~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~G~g~~l~--------~~~~~~~~l~~ai~~ll~ 351 (404)
T 3h4t_A 289 VHHG----GAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADLGVGVAHD--------GPTPTVESLSAALATALT 351 (404)
T ss_dssp EECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS--------SSSCCHHHHHHHHHHHTS
T ss_pred EECC----cHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHCCCEeccC--------cCCCCHHHHHHHHHHHhC
Confidence 9533 23789999999999999865442 33455556788651 122379999999999996
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.85 E-value=1.5e-08 Score=111.66 Aligned_cols=177 Identities=12% Similarity=0.126 Sum_probs=120.1
Q ss_pred HHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEE--EEeCCch---hHHHHHHHHHHHCCCceEEEec
Q 007224 393 AEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQII--VLGTGKK---PMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 393 ~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lv--ivG~g~~---~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
..+|++.+++.++++.++++ .|..+.+++++.++.+ |+..++ ++|.+.. ...+.+.+.... +++.+.+.
T Consensus 431 ~~~~lp~~~G~v~Fg~fn~~--~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~~~~~~~~~~~GI~--~Rv~F~g~ 506 (631)
T 3q3e_A 431 VDYLLRENPEVVNIGIASTT--MKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGITHPYVERFIKSYLG--DSATAHPH 506 (631)
T ss_dssp CCCCCCSCCSEEEEEEEECS--TTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGGHHHHHHHHHHHHG--GGEEEECC
T ss_pred ccccCCcCCCeEEEEECCcc--ccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhhHHHHHHHHHcCCC--ccEEEcCC
Confidence 34567654445777778874 7889999999998876 665553 3674321 222333333322 46777777
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCccccee------cCceEEEecccccccCCCCCCC
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVD 539 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~------~g~~G~l~~~~~~~~~~v~~~d 539 (612)
.+.+.....|+.+|++|-|+.+++ |++.+|||+||+|||+....++..-+. -|-.++++ ..|
T Consensus 507 ~p~~e~la~y~~aDIfLDpfpy~G-gtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~GLpE~LI-----------A~d 574 (631)
T 3q3e_A 507 SPYHQYLRILHNCDMMVNPFPFGN-TNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRLGLPEWLI-----------ANT 574 (631)
T ss_dssp CCHHHHHHHHHTCSEEECCSSSCC-SHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHTTCCGGGE-----------ESS
T ss_pred CCHHHHHHHHhcCcEEEeCCcccC-ChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhcCCCccee-----------cCC
Confidence 777666679999999999997755 999999999999999987665554432 13333211 258
Q ss_pred HHHHHHHHHHHHHhhCHHHHHHHHHHHHHh-----cCCcHHHHHHHHHHHHHHHH
Q 007224 540 VAAVSTTVRRALATYGTQALAEMMKNGMAQ-----DLSWKGPAKKWEETLLNLEV 589 (612)
Q Consensus 540 ~~~la~~l~~ll~~~~~~~~~~~~~~~~~~-----~~sw~~~a~~~~~~y~~l~~ 589 (612)
.+++++...++..| ++.+.++.++.... -|+ ...+++++.|+++..
T Consensus 575 ~eeYv~~Av~La~D--~~~l~~LR~~Lr~~~~~spLFd--~~~~~~e~~ye~~~~ 625 (631)
T 3q3e_A 575 VDEYVERAVRLAEN--HQERLELRRYIIENNGLNTLFT--GDPRPMGQVFLEKLN 625 (631)
T ss_dssp HHHHHHHHHHHHHC--HHHHHHHHHHHHHSCCHHHHTC--SCCTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC--HHHHHHHHHHHHHHhhhCCCcc--hhHHHHHHHHHHHHH
Confidence 99999999999998 67777776665432 333 445666666666653
No 51
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=98.75 E-value=4.7e-08 Score=90.79 Aligned_cols=122 Identities=10% Similarity=0.055 Sum_probs=92.3
Q ss_pred CcEEEEEcCcc---cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--Hh
Q 007224 403 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AG 477 (612)
Q Consensus 403 ~~~il~iGrl~---~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l--~~ 477 (612)
..++++.|++. +.|.++.+++++.++ +.++++++.+... ...+.++......+.. +++ +.
T Consensus 22 ~~vlv~~Gs~~~~~~~~~~~~~~~al~~~---~~~~~~~~g~~~~---------~~~~~~v~~~~~~~~~---~~l~~~~ 86 (170)
T 2o6l_A 22 GVVVFSLGSMVSNMTEERANVIASALAQI---PQKVLWRFDGNKP---------DTLGLNTRLYKWIPQN---DLLGHPK 86 (170)
T ss_dssp CEEEEECCSCCTTCCHHHHHHHHHHHTTS---SSEEEEECCSSCC---------TTCCTTEEEESSCCHH---HHHTSTT
T ss_pred CEEEEECCCCcccCCHHHHHHHHHHHHhC---CCeEEEEECCcCc---------ccCCCcEEEecCCCHH---HHhcCCC
Confidence 46788899985 678888888888766 5788887765521 1234557666555553 355 89
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC----CcccceecCceEEEecccccccCCCCCC--CHHHHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPV--DVAAVSTTVRRAL 551 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~--d~~~la~~l~~ll 551 (612)
||++|.. +.+.+++|||++|+|+|+.... +..+.+.+.+.|+.+ ++. +.++++++|.+++
T Consensus 87 ad~~I~~----~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~g~g~~~----------~~~~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 87 TRAFITH----GGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKARGAAVRV----------DFNTMSSTDLLNALKRVI 152 (170)
T ss_dssp EEEEEEC----CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTTSEEEC----------CTTTCCHHHHHHHHHHHH
T ss_pred cCEEEEc----CCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHcCCeEEe----------ccccCCHHHHHHHHHHHH
Confidence 9999963 4568999999999999999864 345667777889976 554 8899999999999
Q ss_pred Hh
Q 007224 552 AT 553 (612)
Q Consensus 552 ~~ 553 (612)
.+
T Consensus 153 ~~ 154 (170)
T 2o6l_A 153 ND 154 (170)
T ss_dssp HC
T ss_pred cC
Confidence 87
No 52
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.69 E-value=5.6e-06 Score=88.15 Aligned_cols=154 Identities=13% Similarity=0.063 Sum_probs=98.4
Q ss_pred CcEEEEEcCcc---cccCHHHHHHHHHhcccCCcEEEEE-eCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhc
Q 007224 403 IPVIGFIGRLE---EQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~il~iGrl~---~~Kg~d~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~a 478 (612)
..++++.|++. ..+..+.+++++..+ +++++++ |.+... . ...+.++......+. .+++..|
T Consensus 238 ~~v~v~~Gs~~~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~---~~ll~~~ 303 (416)
T 1rrv_A 238 PPVHIGFGSSSGRGIADAAKVAVEAIRAQ---GRRVILSRGWTELV----L----PDDRDDCFAIDEVNF---QALFRRV 303 (416)
T ss_dssp CCEEECCTTCCSHHHHHHHHHHHHHHHHT---TCCEEEECTTTTCC----C----SCCCTTEEEESSCCH---HHHGGGS
T ss_pred CeEEEecCCCCccChHHHHHHHHHHHHHC---CCeEEEEeCCcccc----c----cCCCCCEEEeccCCh---HHHhccC
Confidence 35777889985 567778888888776 5677665 655421 1 234455665544442 3578999
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
|++|. .+-..+++||+++|+|+|+....+ ..+.+.+.+.|+.+. .+..+.++++++|.++ .+
T Consensus 304 d~~v~----~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~--------~~~~~~~~l~~~i~~l-~~- 369 (416)
T 1rrv_A 304 AAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD--------GPTPTFESLSAALTTV-LA- 369 (416)
T ss_dssp SEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS--------SSCCCHHHHHHHHHHH-TS-
T ss_pred CEEEe----cCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHHCCCccCCC--------CCCCCHHHHHHHHHHh-hC-
Confidence 99996 233469999999999999986543 444566667788751 1235889999999999 76
Q ss_pred CHHHHHHHHHHHHHhcCCcHHHHHHHHHHH-HHHH
Q 007224 555 GTQALAEMMKNGMAQDLSWKGPAKKWEETL-LNLE 588 (612)
Q Consensus 555 ~~~~~~~~~~~~~~~~~sw~~~a~~~~~~y-~~l~ 588 (612)
++.++++.+. .+.+.-..-. +..+.+ +.+.
T Consensus 370 -~~~~~~~~~~--~~~~~~~~~~-~~~~~i~e~~~ 400 (416)
T 1rrv_A 370 -PETRARAEAV--AGMVLTDGAA-AAADLVLAAVG 400 (416)
T ss_dssp -HHHHHHHHHH--TTTCCCCHHH-HHHHHHHHHHH
T ss_pred -HHHHHHHHHH--HHHHhhcCcH-HHHHHHHHHHh
Confidence 4444444332 2233323333 555555 5554
No 53
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=98.02 E-value=2.3e-05 Score=83.40 Aligned_cols=157 Identities=16% Similarity=0.066 Sum_probs=103.3
Q ss_pred CcEEEEEcCc-ccccCHHHHHHHHHhcccCCcEEEEE-eCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCE
Q 007224 403 IPVIGFIGRL-EEQKGSDILAAAIPHFIKENVQIIVL-GTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADF 480 (612)
Q Consensus 403 ~~~il~iGrl-~~~Kg~d~ll~a~~~l~~~~~~lviv-G~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi 480 (612)
..++++.|++ ...+..+.+++++.++ +.+++++ |.+... . ...+.++......+.. ++++.||+
T Consensus 239 ~~v~v~~Gs~~~~~~~~~~~~~al~~~---~~~~v~~~g~~~~~----~----~~~~~~v~~~~~~~~~---~~l~~~d~ 304 (415)
T 1iir_A 239 PPVYLGFGSLGAPADAVRVAIDAIRAH---GRRVILSRGWADLV----L----PDDGADCFAIGEVNHQ---VLFGRVAA 304 (415)
T ss_dssp CCEEEECC---CCHHHHHHHHHHHHHT---TCCEEECTTCTTCC----C----SSCGGGEEECSSCCHH---HHGGGSSE
T ss_pred CeEEEeCCCCCCcHHHHHHHHHHHHHC---CCeEEEEeCCCccc----c----cCCCCCEEEeCcCChH---HHHhhCCE
Confidence 3678888998 5888889999999877 4566655 655421 0 1233446554444432 46899999
Q ss_pred EEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhhCH
Q 007224 481 ILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 556 (612)
Q Consensus 481 ~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~~~ 556 (612)
+|..+ -.++++|||++|+|+|+....+ ..+.+.+.+.|+.+. .+..+.++++++|.++ ++ +
T Consensus 305 ~v~~~----G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~~g~g~~~~--------~~~~~~~~l~~~i~~l-~~--~ 369 (415)
T 1iir_A 305 VIHHG----GAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHD--------GPIPTFDSLSAALATA-LT--P 369 (415)
T ss_dssp EEECC----CHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECS--------SSSCCHHHHHHHHHHH-TS--H
T ss_pred EEeCC----ChhHHHHHHHcCCCEEECCCCCccHHHHHHHHHCCCcccCC--------cCCCCHHHHHHHHHHH-cC--H
Confidence 99632 2369999999999999997654 455566667888761 1224889999999999 76 4
Q ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHc
Q 007224 557 QALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 557 ~~~~~~~~~~~~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
+.++++.+. .+.+....-+++..+.++++...
T Consensus 370 ~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 370 ETHARATAV--AGTIRTDGAAVAARLLLDAVSRE 401 (415)
T ss_dssp HHHHHHHHH--HHHSCSCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHH--HHHHhhcChHHHHHHHHHHHHhc
Confidence 444444332 33455566677777777776643
No 54
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.59 E-value=0.0022 Score=73.19 Aligned_cols=182 Identities=13% Similarity=-0.003 Sum_probs=121.7
Q ss_pred HHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhccc--CCcEEEEEeCCchhHHHHHHHHHHHCC---CceEEEecc
Q 007224 392 QAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIK--ENVQIIVLGTGKKPMEKQLEQLEILYP---EKARGVAKF 466 (612)
Q Consensus 392 ~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~--~~~~lvivG~g~~~~~~~l~~l~~~~~---~~i~~~~~~ 466 (612)
|+.+|||.+ .++++.+.+ ..|=-+.+++++.++.+ |+.+|++...+.. .++.+++...+.+ +++.+....
T Consensus 514 R~~~gLp~~--~v~f~~fN~--~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~-~~~~l~~~~~~~gi~~~r~~f~~~~ 588 (723)
T 4gyw_A 514 RSQYGLPED--AIVYCNFNQ--LYKIDPSTLQMWANILKRVPNSVLWLLRFPAV-GEPNIQQYAQNMGLPQNRIIFSPVA 588 (723)
T ss_dssp GGGGTCCTT--SEEEECCSC--GGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG-GHHHHHHHHHHTTCCGGGEEEEECC
T ss_pred hhhcCCCCC--CEEEEeCCc--cccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH-HHHHHHHHHHhcCCCcCeEEECCCC
Confidence 677899854 355555544 46666777777777765 8999999886543 4556666666654 467777666
Q ss_pred ChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecC---ceEEEecccccccCCCCCCCHHHH
Q 007224 467 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---FTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 467 ~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g---~~G~l~~~~~~~~~~v~~~d~~~l 543 (612)
+.+.--..+..+|++|=|.-+ +-|++.+||+.+|+|||+-....+..=+..+ ..|+ .++| ..|.++.
T Consensus 589 ~~~~~l~~~~~~Di~LDt~p~-~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~gl--------~e~i-a~~~~~Y 658 (723)
T 4gyw_A 589 PKEEHVRRGQLADVCLDTPLC-NGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCLGC--------LELI-AKNRQEY 658 (723)
T ss_dssp CHHHHHHHGGGCSEEECCSSS-CCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHHTC--------GGGB-CSSHHHH
T ss_pred CHHHHHHHhCCCeEEeCCCCc-CCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHcCC--------cccc-cCCHHHH
Confidence 665555688999999977665 5589999999999999987633222111100 0011 0111 3688999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHH---HH--HhcCCcHHHHHHHHHHHHHHHHc
Q 007224 544 STTVRRALATYGTQALAEMMKN---GM--AQDLSWKGPAKKWEETLLNLEVA 590 (612)
Q Consensus 544 a~~l~~ll~~~~~~~~~~~~~~---~~--~~~~sw~~~a~~~~~~y~~l~~~ 590 (612)
.+.-.++..| .+.+.++.++ .+ ..-|+-+..++.+++.|+.+...
T Consensus 659 ~~~a~~la~d--~~~l~~lr~~l~~~~~~s~l~d~~~~~~~le~a~~~~w~r 708 (723)
T 4gyw_A 659 EDIAVKLGTD--LEYLKKVRGKVWKQRISSPLFNTKQYTMELERLYLQMWEH 708 (723)
T ss_dssp HHHHHHHHHC--HHHHHHHHHHHHHHHHHSSTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC--HHHHHHHHHHHHHHHHhCcCcCHHHHHHHHHHHHHHHHHH
Confidence 9999999988 4444333322 22 24589999999999999999864
No 55
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.10 E-value=0.086 Score=54.34 Aligned_cols=111 Identities=12% Similarity=0.086 Sum_probs=73.4
Q ss_pred HHHHHhCCCCCCCCcE-EEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEE-ec
Q 007224 390 ALQAEVGLPVDRNIPV-IGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV-AK 465 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~-il~iGrl~~~Kg~--d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~-~~ 465 (612)
.+.++.|++.+ .++ ++..|.=.+.|.+ +.+.+++..+.+.+++++++|... ..+..+++....+...... +.
T Consensus 174 ~~l~~~g~~~~--~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~--e~~~~~~i~~~~~~~~~~l~g~ 249 (349)
T 3tov_A 174 EFYSSHGLTDT--DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPM--DLEMVQPVVEQMETKPIVATGK 249 (349)
T ss_dssp HHHHHTTCCTT--CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTT--THHHHHHHHHTCSSCCEECTTC
T ss_pred HHHHHcCCCCC--CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcc--hHHHHHHHHHhcccccEEeeCC
Confidence 34556677532 344 4556654456654 578888888866688999988654 3455666666554333333 34
Q ss_pred cChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 466 FNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
.+-.++..+++.||++|..- .|..-+ |.++|+|+|+--.
T Consensus 250 ~sl~e~~ali~~a~~~i~~D----sG~~Hl-Aaa~g~P~v~lfg 288 (349)
T 3tov_A 250 FQLGPLAAAMNRCNLLITND----SGPMHV-GISQGVPIVALYG 288 (349)
T ss_dssp CCHHHHHHHHHTCSEEEEES----SHHHHH-HHTTTCCEEEECS
T ss_pred CCHHHHHHHHHhCCEEEECC----CCHHHH-HHhcCCCEEEEEC
Confidence 45566778999999999652 455555 8899999999753
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=95.99 E-value=0.028 Score=57.55 Aligned_cols=113 Identities=17% Similarity=0.173 Sum_probs=74.5
Q ss_pred HHHHHHHhCCCCCCCCcEEEEEcC-cccccCHH--HHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCC----Cce
Q 007224 388 KEALQAEVGLPVDRNIPVIGFIGR-LEEQKGSD--ILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYP----EKA 460 (612)
Q Consensus 388 k~~l~~~~gl~~~~~~~~il~iGr-l~~~Kg~d--~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~----~~i 460 (612)
.+.+++.+|++.+ ...+++..|. ..+.|.+. .+.+++..|.+.+++++++|... ..+..+++....+ .++
T Consensus 167 ~~~~~~~~~~~~~-~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~--e~~~~~~i~~~~~~~~~~~~ 243 (348)
T 1psw_A 167 KSYTCNQFSLSSE-RPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAK--DHEAGNEILAALNTEQQAWC 243 (348)
T ss_dssp HHHHHHHTTCCSS-SCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGG--GHHHHHHHHTTSCHHHHTTE
T ss_pred HHHHHHHhCCCCC-CcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChh--hHHHHHHHHHhhhhccccce
Confidence 4556777787532 2245556665 55667654 88888888876689999998654 2444555554432 124
Q ss_pred EEEe-ccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 461 RGVA-KFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 461 ~~~~-~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.... ..+-.+...+++.||++|... .|..-+ |.++|+|+|+--
T Consensus 244 ~~l~g~~sl~e~~ali~~a~l~I~~D----sg~~Hl-Aaa~g~P~v~lf 287 (348)
T 1psw_A 244 RNLAGETQLDQAVILIAACKAIVTND----SGLMHV-AAALNRPLVALY 287 (348)
T ss_dssp EECTTTSCHHHHHHHHHTSSEEEEES----SHHHHH-HHHTTCCEEEEE
T ss_pred EeccCcCCHHHHHHHHHhCCEEEecC----CHHHHH-HHHcCCCEEEEE
Confidence 3333 345566778999999999765 344444 899999999864
No 57
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=95.36 E-value=0.097 Score=59.60 Aligned_cols=231 Identities=11% Similarity=0.068 Sum_probs=120.6
Q ss_pred HHhcCEEEecCHHHHHHHHccccCCccchhhhhccCeEEeeCCCccCc--cCCCCccccccccCcchhhcchHHHHHHHH
Q 007224 315 ILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQE--WNPLTDKYIGVKYDASTVMDAKPLLKEALQ 392 (612)
Q Consensus 315 ~~~ad~vi~vS~~~~~~l~~~~~~g~~~~~~~~~~~i~vI~Ngvd~~~--~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~ 392 (612)
....|.+++.|+...+.+.+ .++.+.+ + ++.-|..-.. ++.. .....++.++
T Consensus 476 ~~~~D~~~~~s~~~~~~~~~--~f~~~~~------~--i~~~G~PR~D~l~~~~----------------~~~~~~~~~~ 529 (729)
T 3l7i_A 476 TSRWDYLISPNRYSTEIFRS--AFWMDEE------R--ILEIGYPRNDVLVNRA----------------NDQEYLDEIR 529 (729)
T ss_dssp HTTCSEEEESSHHHHHHHHH--HTCCCGG------G--EEESCCGGGHHHHHST----------------TCHHHHHHHH
T ss_pred hccCCEEEeCCHHHHHHHHH--HhCCCcc------e--EEEcCCCchHHHhccc----------------chHHHHHHHH
Confidence 44679999999999888875 3565533 2 3444443211 1111 1123366788
Q ss_pred HHhCCCCCCCCcEEEEEcCccccc----C-----HHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEE
Q 007224 393 AEVGLPVDRNIPVIGFIGRLEEQK----G-----SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGV 463 (612)
Q Consensus 393 ~~~gl~~~~~~~~il~iGrl~~~K----g-----~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~ 463 (612)
+++|++ +++++|+|.-.+.... | ...-++.+.+....++.+++-. ++.+...+. + ..+.+.+...
T Consensus 530 ~~~~~~--~~kk~ILyaPT~r~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~li~r~--Hp~~~~~~~-~-~~~~~~~~~~ 603 (729)
T 3l7i_A 530 THLNLP--SDKKVIMYAPTWRDDEFVSKGKYLFELKIDLDNLYKELGDDYVILLRM--HYLISNALD-L-SGYENFAIDV 603 (729)
T ss_dssp HHTTCC--SSCEEEEECCCCCGGGCCGGGSSCCCCTTCHHHHHHHHTTTEEEEECC--CHHHHTTCC-C-TTCTTTEEEC
T ss_pred HHhCCC--CCCeEEEEeeeeeCCccccccccccchhhHHHHHHHHcCCCeEEEEec--Ccchhcccc-c-cccCCcEEeC
Confidence 999987 4568999987765431 1 1112333333323466666633 322211110 0 1122333333
Q ss_pred eccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHH
Q 007224 464 AKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAV 543 (612)
Q Consensus 464 ~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~l 543 (612)
... +...+++..||++|- -++-++.|++..++|+|.-... ..+... ...|+.+. +..+.----..|.++|
T Consensus 604 ~~~--~di~~ll~~aD~lIT-----DySSv~fD~~~l~kPiif~~~D-~~~Y~~-~~rg~y~d-~~~~~pg~~~~~~~eL 673 (729)
T 3l7i_A 604 SNY--NDVSELFLISDCLIT-----DYSSVMFDYGILKRPQFFFAYD-IDKYDK-GLRGFYMN-YMEDLPGPIYTEPYGL 673 (729)
T ss_dssp TTC--SCHHHHHHTCSEEEE-----SSCTHHHHHGGGCCCEEEECTT-TTTTTS-SCCSBSSC-TTSSSSSCEESSHHHH
T ss_pred CCC--cCHHHHHHHhCEEEe-----echHHHHhHHhhCCCEEEecCC-HHHHhh-ccCCcccC-hhHhCCCCeECCHHHH
Confidence 222 235568999999993 3778999999999999987321 112111 11233220 0000000013688999
Q ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHhcCCc--HHHHHHHHHHHHHHHH
Q 007224 544 STTVRRALATYGTQALAEMMKNGMAQDLSW--KGPAKKWEETLLNLEV 589 (612)
Q Consensus 544 a~~l~~ll~~~~~~~~~~~~~~~~~~~~sw--~~~a~~~~~~y~~l~~ 589 (612)
.++|+..... ...+.+..++...+.+.+ ...+++..+.+.+...
T Consensus 674 ~~~i~~~~~~--~~~~~~~~~~~~~~~~~~~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 674 AKELKNLDKV--QQQYQEKIDAFYDRFCSVDNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHTTHHHH--HHHTHHHHHHHHHHHSTTCCSCHHHHHHHHHHHHHH
T ss_pred HHHHhhhhcc--chhHHHHHHHHHHHhCCccCChHHHHHHHHHHhcCc
Confidence 9999988764 233333333333333333 3456666555544443
No 58
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=95.29 E-value=0.094 Score=52.41 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=60.8
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
.++++.|..+...-.+.+++++... .. -.+|.|.+.+. .+.+++...+.+ ++... .|..+ +.++|+.||++|.
T Consensus 159 ~ILv~~GG~d~~~l~~~vl~~L~~~--~~-i~vv~G~~~~~-~~~l~~~~~~~~-~v~v~-~~~~~-m~~~m~~aDlvI~ 231 (282)
T 3hbm_A 159 DFFICMGGTDIKNLSLQIASELPKT--KI-ISIATSSSNPN-LKKLQKFAKLHN-NIRLF-IDHEN-IAKLMNESNKLII 231 (282)
T ss_dssp EEEEECCSCCTTCHHHHHHHHSCTT--SC-EEEEECTTCTT-HHHHHHHHHTCS-SEEEE-ESCSC-HHHHHHTEEEEEE
T ss_pred eEEEEECCCchhhHHHHHHHHhhcC--CC-EEEEECCCchH-HHHHHHHHhhCC-CEEEE-eCHHH-HHHHHHHCCEEEE
Confidence 3566778766554344555555433 22 44667887653 455555555444 35443 34333 5579999999997
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcCC
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVAST 509 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~~ 509 (612)
+ .|.++.|++++|+|.|.-..
T Consensus 232 ~-----gG~T~~E~~~~g~P~i~ip~ 252 (282)
T 3hbm_A 232 S-----ASSLVNEALLLKANFKAICY 252 (282)
T ss_dssp E-----SSHHHHHHHHTTCCEEEECC
T ss_pred C-----CcHHHHHHHHcCCCEEEEeC
Confidence 2 47899999999999998653
No 59
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=94.88 E-value=0.19 Score=53.77 Aligned_cols=134 Identities=13% Similarity=0.034 Sum_probs=79.3
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
.+++..|.+... ..+.+.+.+..+...+.+++++-.+.. ....-+.+..+.++++... .|-... .+++.+++-++
T Consensus 275 vVyvsfGS~~~~-~~~~~~el~~~l~~~~~~flw~~~~~~-~~~lp~~~~~~~~~~~~vv-~w~Pq~--~vL~h~~v~~f 349 (454)
T 3hbf_A 275 VVYISFGSVVTP-PPHELTALAESLEECGFPFIWSFRGDP-KEKLPKGFLERTKTKGKIV-AWAPQV--EILKHSSVGVF 349 (454)
T ss_dssp EEEEECCSSCCC-CHHHHHHHHHHHHHHCCCEEEECCSCH-HHHSCTTHHHHTTTTEEEE-SSCCHH--HHHHSTTEEEE
T ss_pred eEEEecCCCCcC-CHHHHHHHHHHHHhCCCeEEEEeCCcc-hhcCCHhHHhhcCCceEEE-eeCCHH--HHHhhcCcCeE
Confidence 456667776532 234444444444444667766543331 1111112222334445544 443332 58999996666
Q ss_pred CCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 484 PSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 484 pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-++ +| .+++||+++|+|.|+-...+ ....+.+. +.|+.+. -..-+.+++.++|.+++++
T Consensus 350 vtH---~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~--------~~~~~~~~l~~av~~ll~~ 414 (454)
T 3hbf_A 350 LTH---SGWNSVLECIVGGVPMISRPFFGDQGLNTILTESVLEIGVGVD--------NGVLTKESIKKALELTMSS 414 (454)
T ss_dssp EEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTTSCSEEECG--------GGSCCHHHHHHHHHHHHSS
T ss_pred Eec---CCcchHHHHHHcCCCEecCcccccHHHHHHHHHHhhCeeEEec--------CCCCCHHHHHHHHHHHHCC
Confidence 565 66 58999999999999986533 22344453 6787651 0135789999999999976
No 60
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=93.96 E-value=0.21 Score=53.48 Aligned_cols=132 Identities=11% Similarity=-0.010 Sum_probs=74.9
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEE-EeCCch-hHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hc
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIV-LGTGKK-PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GA 478 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvi-vG~g~~-~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~a 478 (612)
..+++..|.+... ..+.+.+++..+.+.++++++ +|.... ...+.+ ....+.++... .|-... .+++ .+
T Consensus 272 ~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~l~~~~---~~~~~~~~~v~-~w~pq~--~vL~h~~~ 344 (456)
T 2c1x_A 272 SVVYISFGTVTTP-PPAEVVALSEALEASRVPFIWSLRDKARVHLPEGF---LEKTRGYGMVV-PWAPQA--EVLAHEAV 344 (456)
T ss_dssp CEEEEECCSSCCC-CHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTH---HHHHTTTEEEE-SCCCHH--HHHTSTTE
T ss_pred ceEEEecCccccC-CHHHHHHHHHHHHhcCCeEEEEECCcchhhCCHHH---HhhcCCceEEe-cCCCHH--HHhcCCcC
Confidence 3556667776543 334444444444333566654 443321 111111 11123345444 443332 4788 56
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|++|. + +-.++++||+++|+|.|+-...+ ....+.+. +.|+.+. -..-+.+++.++|++++++
T Consensus 345 ~~fvt--h--~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~--------~~~~~~~~l~~~i~~ll~~ 412 (456)
T 2c1x_A 345 GAFVT--H--CGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIE--------GGVFTKSGLMSCFDQILSQ 412 (456)
T ss_dssp EEEEE--C--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECG--------GGSCCHHHHHHHHHHHHHS
T ss_pred CEEEe--c--CCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEEEec--------CCCcCHHHHHHHHHHHHCC
Confidence 67773 3 23468999999999999986532 23344455 6787651 0124789999999999987
No 61
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=93.46 E-value=0.72 Score=49.54 Aligned_cols=132 Identities=6% Similarity=-0.088 Sum_probs=76.2
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCch------hHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK------PMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG 477 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~------~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~ 477 (612)
.+++..|.+.. ...+.+.+++..+.+.+.+++++-.... ...+ .+....+.++... .|-... .+++.
T Consensus 297 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~---~~~~~~~~~~~v~-~~~pq~--~~L~h 369 (482)
T 2pq6_A 297 VVYVNFGSTTV-MTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSS---EFTNEIADRGLIA-SWCPQD--KVLNH 369 (482)
T ss_dssp EEEEECCSSSC-CCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCH---HHHHHHTTTEEEE-SCCCHH--HHHTS
T ss_pred eEEEecCCccc-CCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcH---hHHHhcCCCEEEE-eecCHH--HHhcC
Confidence 45666777642 2334444444444444678776533210 0111 1222234445544 443333 38987
Q ss_pred cCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----ccccee-cCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 478 ADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDTVE-EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 478 adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~v~-~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
+++-++-++ +-.++++||+++|+|+|+-...+ ....+. +-+.|+.+. ..-+.+++.++|++++.
T Consensus 370 ~~~~~~vth--~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~~G~g~~l~---------~~~~~~~l~~~i~~ll~ 438 (482)
T 2pq6_A 370 PSIGGFLTH--CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEID---------TNVKREELAKLINEVIA 438 (482)
T ss_dssp TTEEEEEEC--CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEECC---------SSCCHHHHHHHHHHHHT
T ss_pred CCCCEEEec--CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHHhCEEEEEC---------CCCCHHHHHHHHHHHHc
Confidence 776444344 23468999999999999987543 222332 456677651 23578999999999998
Q ss_pred h
Q 007224 553 T 553 (612)
Q Consensus 553 ~ 553 (612)
+
T Consensus 439 ~ 439 (482)
T 2pq6_A 439 G 439 (482)
T ss_dssp S
T ss_pred C
Confidence 7
No 62
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=93.31 E-value=1 Score=48.28 Aligned_cols=139 Identities=10% Similarity=-0.030 Sum_probs=77.0
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCch--------------hHHHHH-HHHHHHCCCceEEEeccC
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK--------------PMEKQL-EQLEILYPEKARGVAKFN 467 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~--------------~~~~~l-~~l~~~~~~~i~~~~~~~ 467 (612)
..+++..|.+.. ...+.+.+.+..+...+.+++++-.... .....+ +.+.++..++-.....|-
T Consensus 269 ~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~ 347 (480)
T 2vch_A 269 SVLYVSFGSGGT-LTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWA 347 (480)
T ss_dssp CEEEEECTTTCC-CCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCC
T ss_pred ceEEEecccccC-CCHHHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCcc
Confidence 356677788753 2445555555555445677766533210 010000 011111111112222243
Q ss_pred hHHHHHHHHhcCEEEeCCCCCCCc-HHHHHHHHcCCceEEcCCCC----cccce-ecCceEEEecccccccCCCCCCCHH
Q 007224 468 IPLAHMIIAGADFILIPSRFEPCG-LIQLHAMRYGTVPIVASTGG----LVDTV-EEGFTGFQMGSFSVDCEAVDPVDVA 541 (612)
Q Consensus 468 ~~~~~~~l~~adi~l~pS~~E~~g-l~~lEAma~G~PvI~s~~gg----~~e~v-~~g~~G~l~~~~~~~~~~v~~~d~~ 541 (612)
... .+++.+++-++-++ +| ++++||+++|+|.|+--..+ ....+ .+-+.|+.+... .+ ..-+.+
T Consensus 348 Pq~--~vL~h~~v~~fvtH---gG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~-~~----~~~~~~ 417 (480)
T 2vch_A 348 PQA--QVLAHPSTGGFLTH---CGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAG-DD----GLVRRE 417 (480)
T ss_dssp CHH--HHHHSTTEEEEEEC---CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCC-TT----SCCCHH
T ss_pred CHH--HHhCCCCcCeEEec---ccchhHHHHHHcCCCEEeccccccchHHHHHHHHHhCeEEEeecc-cC----CccCHH
Confidence 332 58999997555455 55 58999999999999987543 23333 455667754100 00 034789
Q ss_pred HHHHHHHHHHH
Q 007224 542 AVSTTVRRALA 552 (612)
Q Consensus 542 ~la~~l~~ll~ 552 (612)
+++++|++++.
T Consensus 418 ~l~~av~~vl~ 428 (480)
T 2vch_A 418 EVARVVKGLME 428 (480)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999999997
No 63
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=91.32 E-value=3.1 Score=44.31 Aligned_cols=136 Identities=11% Similarity=0.072 Sum_probs=74.3
Q ss_pred CcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc-hhHHHHHH-HHHHHCCCceEEEeccChHHHHHHHH--hc
Q 007224 403 IPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK-KPMEKQLE-QLEILYPEKARGVAKFNIPLAHMIIA--GA 478 (612)
Q Consensus 403 ~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~-~~~~~~l~-~l~~~~~~~i~~~~~~~~~~~~~~l~--~a 478 (612)
..+++..|.+...-+.+.+.+++..+.+.+.+++++-... +.+.+.+. +... +.++... .|-... .+++ .+
T Consensus 277 ~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~--~~~~~v~-~w~pq~--~vL~h~~~ 351 (463)
T 2acv_A 277 SVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMEL--EGKGMIC-GWAPQV--EVLAHKAI 351 (463)
T ss_dssp CEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHH--HCSEEEE-SSCCHH--HHHHSTTE
T ss_pred ceEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhcc--CCCEEEE-ccCCHH--HHhCCCcc
Confidence 3566667777622233444444444434467776554322 11111111 1110 2234433 343332 3787 56
Q ss_pred CEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCC----cccc-eecCceEEEec-ccccccCCCC--CCCHHHHHHHHHHH
Q 007224 479 DFILIPSRFEPCGLIQLHAMRYGTVPIVASTGG----LVDT-VEEGFTGFQMG-SFSVDCEAVD--PVDVAAVSTTVRRA 550 (612)
Q Consensus 479 di~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg----~~e~-v~~g~~G~l~~-~~~~~~~~v~--~~d~~~la~~l~~l 550 (612)
|++|. + +-.++++||+++|+|.|+-...+ .... +.+-+.|+.++ .+. -. ..+.+++.++|+++
T Consensus 352 ~~fvt--h--~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~-----~~~~~~~~~~l~~ai~~l 422 (463)
T 2acv_A 352 GGFVS--H--CGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYR-----KGSDVVAAEEIEKGLKDL 422 (463)
T ss_dssp EEEEE--C--CCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHHTSCCEEESCSSCC-----TTCCCCCHHHHHHHHHHH
T ss_pred CeEEe--c--CCchhHHHHHHcCCCeeeccchhhhHHHHHHHHHHcCeEEEEecccC-----CCCccccHHHHHHHHHHH
Confidence 66773 3 23468999999999999987533 2333 35556777641 000 01 34789999999999
Q ss_pred HH
Q 007224 551 LA 552 (612)
Q Consensus 551 l~ 552 (612)
++
T Consensus 423 l~ 424 (463)
T 2acv_A 423 MD 424 (463)
T ss_dssp TC
T ss_pred Hh
Confidence 96
No 64
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=89.32 E-value=1.3 Score=44.57 Aligned_cols=139 Identities=12% Similarity=0.100 Sum_probs=81.6
Q ss_pred cEEEEEcCcccccCH--HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEE
Q 007224 404 PVIGFIGRLEEQKGS--DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI 481 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~--d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~ 481 (612)
.+++..|.=.+.|.+ +.+.+.+..+.+.++++++.+.++ ...+..+++....+. +...+..+-.+...+++.||++
T Consensus 180 ~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~-~e~~~~~~i~~~~~~-~~l~g~~sl~el~ali~~a~l~ 257 (326)
T 2gt1_A 180 YAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAP-HEEERAKRLAEGFAY-VEVLPKMSLEGVARVLAGAKFV 257 (326)
T ss_dssp EEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSH-HHHHHHHHHHTTCTT-EEECCCCCHHHHHHHHHTCSEE
T ss_pred EEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCH-HHHHHHHHHHhhCCc-ccccCCCCHHHHHHHHHhCCEE
Confidence 345556654555654 488888888876788988874333 234445566554443 4333445566777899999999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceEEcCCCCcccceec-CceEEEe-cccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-GFTGFQM-GSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e~v~~-g~~G~l~-~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|..- .|..=+ |.++|+|+|+--....+..... +.....+ ++ .+| +..-+++++.+++.++++.
T Consensus 258 I~~D----SG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P~~~~~~~~~~~--~~c--m~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 258 VSVD----TGLSHL-TAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP--GNE--LSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp EEES----SHHHHH-HHHTTCCEEEEESSSCHHHHCCCSSSEEEEECG--GGC--GGGCCHHHHHHHHHHTTTT
T ss_pred EecC----CcHHHH-HHHcCCCEEEEECCCChhhcCCCCCCceEecCC--ccc--ccCCCHHHHHHHHHHHHHH
Confidence 9653 355555 6779999998742222211111 1111111 11 011 2344778888888877764
No 65
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=78.23 E-value=1.6 Score=41.71 Aligned_cols=41 Identities=20% Similarity=0.219 Sum_probs=31.0
Q ss_pred ccChHHHHHHHH-hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC
Q 007224 465 KFNIPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 510 (612)
Q Consensus 465 ~~~~~~~~~~l~-~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g 510 (612)
.|.. .+..+|+ .||++|. + +-..+++|++++|+|.|.-...
T Consensus 120 ~f~~-~m~~~l~~~AdlvIs--h--aGagTv~Eal~~G~P~IvVP~~ 161 (224)
T 2jzc_A 120 DFST-KMQSIIRDYSDLVIS--H--AGTGSILDSLRLNKPLIVCVND 161 (224)
T ss_dssp CSSS-SHHHHHHHHCSCEEE--S--SCHHHHHHHHHTTCCCCEECCS
T ss_pred eccc-hHHHHHHhcCCEEEE--C--CcHHHHHHHHHhCCCEEEEcCc
Confidence 4433 3456899 9999994 2 4457999999999999987643
No 66
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=76.47 E-value=2 Score=44.79 Aligned_cols=37 Identities=22% Similarity=0.250 Sum_probs=29.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++. | ++|--.-...|+++|+++||+|+++++.
T Consensus 1 M~Il~~~~---~---~~GHv~P~l~la~~L~~~Gh~V~~~~~~ 37 (415)
T 1iir_A 1 MRVLLATC---G---SRGDTEPLVALAVRVRDLGADVRMCAPP 37 (415)
T ss_dssp CEEEEECC---S---CHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred CeEEEEcC---C---CchhHHHHHHHHHHHHHCCCeEEEEcCH
Confidence 89999852 3 4555566777999999999999999976
No 67
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=74.33 E-value=3.4 Score=40.87 Aligned_cols=42 Identities=17% Similarity=0.166 Sum_probs=28.4
Q ss_pred ccCCCceEEEEeccccCccccccHH-HHhhhhHHHHHhCCCeEEEEe
Q 007224 80 VCGVGLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~~-~~~~~La~~L~~~Gh~V~vit 125 (612)
..|+.||||+|... |. .++.. ........+|.+.||+|+++=
T Consensus 18 ~~m~~MKiLII~aH--P~--~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 18 LYFQSMKVLLIYAH--PE--PRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp ----CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred chhhCCeEEEEEeC--CC--CccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 44788999999875 64 34443 344556788899999999984
No 68
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=73.73 E-value=4.4 Score=34.92 Aligned_cols=40 Identities=15% Similarity=0.194 Sum_probs=31.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeE-EEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V-~vit~~ 127 (612)
||++++... +|+ ..-.......++.++.+.||+| .|+-..
T Consensus 1 mk~~iiv~~-~p~--~~~~~~~al~~a~a~~~~g~~v~~vff~~ 41 (130)
T 2hy5_A 1 MKFALQINE-GPY--QHQASDSAYQFAKAALEKGHEIFRVFFYH 41 (130)
T ss_dssp CEEEEEECS-CTT--TSTHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred CEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhcCCeeCEEEEec
Confidence 789999876 565 3455667788999999999999 887655
No 69
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=72.91 E-value=4.9 Score=35.30 Aligned_cols=41 Identities=20% Similarity=0.202 Sum_probs=33.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeE-EEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRV-MTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V-~vit~~ 127 (612)
.||++|+... +|+ ..-.+.....++.++.+.||+| .|+-..
T Consensus 12 ~~~~~ivv~~-~Py--g~~~a~~Al~~A~aala~g~eV~~VFf~~ 53 (140)
T 2d1p_A 12 SMRFAIVVTG-PAY--GTQQASSAFQFAQALIADGHELSSVFFYR 53 (140)
T ss_dssp CCEEEEEECS-CSS--SSSHHHHHHHHHHHHHHTTCEEEEEEECG
T ss_pred ceEEEEEEcC-CCC--CcHHHHHHHHHHHHHHHCCCccCEEEEec
Confidence 5999999986 675 4556667789999999999999 777654
No 70
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=71.96 E-value=43 Score=28.05 Aligned_cols=109 Identities=15% Similarity=0.110 Sum_probs=66.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc-----CCc
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~-----G~P 503 (612)
..+++|+.+... ....+++.....+-.+. .--+...+...+. ..|++|+-... +.-|+.+++.+.. .+|
T Consensus 8 ~~~iLivd~~~~-~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~p 84 (147)
T 2zay_A 8 WWRIMLVDTQLP-ALAASISALSQEGFDII--QCGNAIEAVPVAVKTHPHLIITEANMPKISGMDLFNSLKKNPQTASIP 84 (147)
T ss_dssp CEEEEEECTTGG-GGHHHHHHHHHHTEEEE--EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHTSTTTTTSC
T ss_pred CceEEEEeCCHH-HHHHHHHHHHHcCCeEE--EeCCHHHHHHHHHcCCCCEEEEcCCCCCCCHHHHHHHHHcCcccCCCC
Confidence 567788877653 33344444333332222 2224444433443 46888875543 4467778887764 577
Q ss_pred eEEcCCCCc----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 504 PIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|+-....- .+.+..|..+++. .|.+.+++...|.+++..
T Consensus 85 ii~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~L~~~i~~~~~~ 128 (147)
T 2zay_A 85 VIALSGRATAKEEAQLLDMGFIDFIA----------KPVNAIRLSARIKRVLKL 128 (147)
T ss_dssp EEEEESSCCHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHhCCCCEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 776543222 2334568889987 899999999999999876
No 71
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=71.96 E-value=3 Score=39.48 Aligned_cols=39 Identities=23% Similarity=0.379 Sum_probs=27.5
Q ss_pred cccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 79 IVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 79 ~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
...+++|||++++. +||+| ..+++.|.++||+|.+++..
T Consensus 16 ~~~l~~~~ilVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 16 NLYFQGMRVLVVGA-------NGKVA---RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp -----CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred ccCcCCCeEEEECC-------CChHH---HHHHHHHHhCCCeEEEEECC
Confidence 34456889887764 48888 56778899999999998765
No 72
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=68.79 E-value=49 Score=27.41 Aligned_cols=109 Identities=12% Similarity=0.123 Sum_probs=68.9
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc-----CCc
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~-----G~P 503 (612)
..+++|+.+.. .....++++..+.+-.+. .--+...+-..+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 6 ~~~iLivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ 82 (140)
T 3grc_A 6 RPRILICEDDP-DIARLLNLMLEKGGFDSD--MVHSAAQALEQVARRPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLA 82 (140)
T ss_dssp CSEEEEECSCH-HHHHHHHHHHHHTTCEEE--EECSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCE
T ss_pred CCCEEEEcCCH-HHHHHHHHHHHHCCCeEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCC
Confidence 45777777654 345555555555543232 2224444444443 35888875543 4567778887764 678
Q ss_pred eEEcCCCCc----c-cceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 504 PIVASTGGL----V-DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg~----~-e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|.-....- . +....|..+++. .|.+.+++.++|.++++.
T Consensus 83 ii~~s~~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 83 IVVVSANAREGELEFNSQPLAVSTWLE----------KPIDENLLILSLHRAIDN 127 (140)
T ss_dssp EEEECTTHHHHHHHHCCTTTCCCEEEC----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEecCCChHHHHHHhhhcCCCEEEe----------CCCCHHHHHHHHHHHHHh
Confidence 777654321 2 445567788876 899999999999999986
No 73
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=68.45 E-value=3.7 Score=40.43 Aligned_cols=33 Identities=30% Similarity=0.493 Sum_probs=24.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++. ||.|-.=..|++.|.++||+|++++.+
T Consensus 1 MkILVT----------GatGfIG~~L~~~L~~~G~~V~~l~R~ 33 (298)
T 4b4o_A 1 MRVLVG----------GGTGFIGTALTQLLNARGHEVTLVSRK 33 (298)
T ss_dssp CEEEEE----------TTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEE----------CCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 887755 444433456889999999999999754
No 74
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=68.00 E-value=4.9 Score=36.71 Aligned_cols=36 Identities=19% Similarity=0.143 Sum_probs=27.1
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.+|+|++++. +|++| ..+++.|.++||+|.+++..
T Consensus 1 M~~~~ilVtGa-------tG~iG---~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAVKKIAIFGA-------TGQTG---LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCCCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEEcC-------CcHHH---HHHHHHHHHCCCeEEEEEeC
Confidence 34578877754 47777 56788899999999998764
No 75
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=64.95 E-value=59 Score=26.97 Aligned_cols=108 Identities=14% Similarity=0.225 Sum_probs=68.8
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH----hcCEEEeCCCC-CCCcHHHHHHHHc---CCce
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA----GADFILIPSRF-EPCGLIQLHAMRY---GTVP 504 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~----~adi~l~pS~~-E~~gl~~lEAma~---G~Pv 504 (612)
.+++|+.+.. ...+.++.+..+.+..+. ..-+.+.+...+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 4 ~~ilivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 80 (143)
T 3jte_A 4 AKILVIDDES-TILQNIKFLLEIDGNEVL--TASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAV 80 (143)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEE
T ss_pred CEEEEEcCCH-HHHHHHHHHHHhCCceEE--EeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeE
Confidence 4677777654 355566666665553332 2224444444554 56888875543 4567766666543 6777
Q ss_pred EEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 505 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|.-.... ..+.+..|..+++. .|.+.+++..+|.+++..
T Consensus 81 i~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~l~~~~~~ 123 (143)
T 3jte_A 81 IILTGHGDLDNAILAMKEGAFEYLR----------KPVTAQDLSIAINNAINR 123 (143)
T ss_dssp EEEECTTCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHhCcceeEe----------CCCCHHHHHHHHHHHHHH
Confidence 6654322 33455668889987 899999999999999985
No 76
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=62.61 E-value=5.9 Score=36.63 Aligned_cols=33 Identities=27% Similarity=0.463 Sum_probs=26.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..+++.|.++||+|.+++..
T Consensus 1 MkvlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGA-------TGRAG---SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcC-------CchhH---HHHHHHHHhCCCEEEEEEcC
Confidence 78877764 47777 46778899999999998765
No 77
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=61.76 E-value=6.2 Score=36.66 Aligned_cols=33 Identities=24% Similarity=0.515 Sum_probs=25.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..+++.|.++||+|.+++..
T Consensus 1 MkilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGA-------TGRAG---SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC-------CCHHH---HHHHHHHHHCCCEEEEEEec
Confidence 78776654 47777 56788899999999999754
No 78
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=61.34 E-value=7.3 Score=41.54 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=30.2
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.+++|+++.. | ..|--.-...|++.|+++||+|+++++.
T Consensus 6 ~~~~~vl~~p~---p---~~GHi~P~l~La~~L~~rG~~VT~v~t~ 45 (482)
T 2pq6_A 6 NRKPHVVMIPY---P---VQGHINPLFKLAKLLHLRGFHITFVNTE 45 (482)
T ss_dssp --CCEEEEECC---S---SHHHHHHHHHHHHHHHHTTCEEEEEEEH
T ss_pred CCCCEEEEecC---c---cchhHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 44678999862 4 3455556778999999999999999876
No 79
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=61.16 E-value=6.3 Score=38.39 Aligned_cols=40 Identities=25% Similarity=0.258 Sum_probs=29.0
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
.++||||+.+.. |=.+.-+..|.++|.+ +|+|+|++|...
T Consensus 9 ~~~m~ILlTNDD-------Gi~apGi~aL~~~l~~-~~~V~VVAP~~~ 48 (261)
T 3ty2_A 9 TPKLRLLLSNDD-------GVYAKGLAILAKTLAD-LGEVDVVAPDRN 48 (261)
T ss_dssp --CCEEEEECSS-------CTTCHHHHHHHHHHTT-TSEEEEEEESSC
T ss_pred CCCCeEEEEcCC-------CCCCHHHHHHHHHHHh-cCCEEEEecCCC
Confidence 446999999875 1123357788899977 899999999744
No 80
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=60.46 E-value=77 Score=27.01 Aligned_cols=109 Identities=17% Similarity=0.152 Sum_probs=64.1
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH----hcCEEEeCCCC-CCCcHHHHHHHH---cCCc
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA----GADFILIPSRF-EPCGLIQLHAMR---YGTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~----~adi~l~pS~~-E~~gl~~lEAma---~G~P 503 (612)
..+++|+.+.. ...+.++++..+.+-.+.. .--+...+...+. ..|++++-... +.-|+.+++.+. ..+|
T Consensus 36 ~~~Ilivdd~~-~~~~~l~~~L~~~g~~v~~-~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ 113 (157)
T 3hzh_A 36 PFNVLIVDDSV-FTVKQLTQIFTSEGFNIID-TAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNAR 113 (157)
T ss_dssp ECEEEEECSCH-HHHHHHHHHHHHTTCEEEE-EESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCC
T ss_pred ceEEEEEeCCH-HHHHHHHHHHHhCCCeEEE-EECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCc
Confidence 35677776644 3445555555555432321 1223444333443 34888876544 445666666554 3677
Q ss_pred eEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 504 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 504 vI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
+|+..... ..+.+..|..+++. .|.+.+++.+.|.+++.
T Consensus 114 ii~ls~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~ 156 (157)
T 3hzh_A 114 VIMISALGKEQLVKDCLIKGAKTFIV----------KPLDRAKVLQRVMSVFV 156 (157)
T ss_dssp EEEEESCCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHTTC
T ss_pred EEEEeccCcHHHHHHHHHcCCCEEEe----------CCCCHHHHHHHHHHHhc
Confidence 77654332 22345567888987 89999999999988764
No 81
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=60.32 E-value=77 Score=26.70 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=63.5
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh---cCEEEeCCCC-CCCcHHHHHHHH---cCCce
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG---ADFILIPSRF-EPCGLIQLHAMR---YGTVP 504 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~---adi~l~pS~~-E~~gl~~lEAma---~G~Pv 504 (612)
..+++|+.+.. .....++++..+..+.......-+...+...+.. .|++++-... +.-|+.+++.+. ..+|+
T Consensus 3 ~~~iLivdd~~-~~~~~l~~~L~~~~g~~~v~~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 81 (154)
T 2qsj_A 3 LTVVLIVDDHH-LIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADNTVDLILLDVNLPDAEAIDGLVRLKRFDPSNAV 81 (154)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTCCCSEEEECC------CHHHHHHHHHHCTTSEE
T ss_pred ccEEEEEcCCH-HHHHHHHHHHHhCCCceEEEEecCHHHHHHHHhccCCCCEEEEeCCCCCCchHHHHHHHHHhCCCCeE
Confidence 35677777654 3455555555554221111222244545455554 6888875543 335666666664 36787
Q ss_pred EEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 505 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|.-.... ..+.+..|..+++. .|.+.+++.++|.+++..
T Consensus 82 i~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~L~~~l~~~~~~ 124 (154)
T 2qsj_A 82 ALISGETDHELIRAALEAGADGFIP----------KSADPQVLIHAVSLILEG 124 (154)
T ss_dssp EEC-----CHHHHHHHHTTCCBBCC----------TTSCHHHHHHHHHHHHTT
T ss_pred EEEeCCCCHHHHHHHHHccCCEEEe----------CCCCHHHHHHHHHHHHcC
Confidence 7754332 22344557778865 899999999999999875
No 82
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=59.27 E-value=13 Score=32.17 Aligned_cols=41 Identities=15% Similarity=-0.128 Sum_probs=31.6
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|+++|... .|+ ...-......++...++.||+|.++...
T Consensus 15 ~~kl~ii~~s-gP~--~~~~~~~al~lA~~A~a~g~eV~vFf~~ 55 (134)
T 3mc3_A 15 XXXILIVVTH-GPE--DLDRTYAPLFMASISASMEYETSVFFMI 55 (134)
T ss_dssp CCEEEEEECC-CGG--GTHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cceEEEEEcc-CCC--CHHHHHHHHHHHHHHHHCCCCEEEEEEe
Confidence 4788888876 565 3455566777888899999999988765
No 83
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=58.80 E-value=81 Score=26.51 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=68.8
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH-----------hcCEEEeCCCC-CCCcHHHHHHHH
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA-----------GADFILIPSRF-EPCGLIQLHAMR 499 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~-----------~adi~l~pS~~-E~~gl~~lEAma 499 (612)
..+++|+.+.. .....++++..+.+.......--+...+...+. ..|++++-... +.-|+-+++.+.
T Consensus 4 ~~~ILivddd~-~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~lr 82 (152)
T 3heb_A 4 SVTIVMIEDDL-GHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKLVK 82 (152)
T ss_dssp -CEEEEECCCH-HHHHHHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHHHH
T ss_pred CceEEEEeCCH-HHHHHHHHHHHhCCCcceEEEeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHHHH
Confidence 35777777654 355666666666553111222234555545553 46788775443 456777887776
Q ss_pred c-----CCceEEcCCCCc----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 500 Y-----GTVPIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 500 ~-----G~PvI~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
. .+|+|+.....- .+.+..|..+++. .|.+.+++.++|.++...
T Consensus 83 ~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 135 (152)
T 3heb_A 83 ENPHTRRSPVVILTTTDDQREIQRCYDLGANVYIT----------KPVNYENFANAIRQLGLF 135 (152)
T ss_dssp HSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHHH
T ss_pred hcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 4 567766543322 2345567889987 899999999999988653
No 84
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=57.77 E-value=81 Score=26.17 Aligned_cols=111 Identities=10% Similarity=0.024 Sum_probs=70.8
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh--cCEEEeCCCC-CCCcHHHHHHHHc-----CCc
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMRY-----GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~--adi~l~pS~~-E~~gl~~lEAma~-----G~P 503 (612)
..+++|+.+.. .....++++..+.+........-+...+...+.. .|++++-... +.-|+.+++.+.. .+|
T Consensus 5 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (144)
T 3kht_A 5 SKRVLVVEDNP-DDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTP 83 (144)
T ss_dssp CEEEEEECCCH-HHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCC
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Confidence 45777777654 3555666666665543222222345554445543 5788875543 4467778887764 677
Q ss_pred eEEcCCCC----cccceecCceEEEecccccccCCCCCC-CHHHHHHHHHHHHHh
Q 007224 504 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV-DVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~-d~~~la~~l~~ll~~ 553 (612)
+|+-.... ..+.+..|..+++. .|. +.+++.++|.++++.
T Consensus 84 ii~~s~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~~l~~~i~~~l~~ 128 (144)
T 3kht_A 84 IVILTDNVSDDRAKQCMAAGASSVVD----------KSSNNVTDFYGRIYAIFSY 128 (144)
T ss_dssp EEEEETTCCHHHHHHHHHTTCSEEEE----------CCTTSHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHcCCCEEEE----------CCCCcHHHHHHHHHHHHHH
Confidence 77654332 22345568889987 899 999999999999875
No 85
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=57.18 E-value=81 Score=25.99 Aligned_cols=110 Identities=6% Similarity=0.020 Sum_probs=67.7
Q ss_pred CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh--cCEEEeCCCC-CCCcHHHHHHHHc-----CC
Q 007224 431 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMRY-----GT 502 (612)
Q Consensus 431 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~--adi~l~pS~~-E~~gl~~lEAma~-----G~ 502 (612)
...+++|+.+.. ...+.++++....+-.+. .--+.+.+...+.. .|++++-... +.-|+.+++.+.. .+
T Consensus 6 ~~~~iLivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~ 82 (142)
T 3cg4_A 6 HKGDVMIVDDDA-HVRIAVKTILSDAGFHII--SADSGGQCIDLLKKGFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGI 82 (142)
T ss_dssp CCCEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHTCCCEEEEEESCCSSSCHHHHHHHHHHTTCCTTE
T ss_pred CCCeEEEEcCCH-HHHHHHHHHHHHCCeEEE--EeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCC
Confidence 356778887654 345555555555442232 22244444445543 5777765443 3467777777754 46
Q ss_pred ceEEcCCC----CcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 503 VPIVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 503 PvI~s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|+|+-... ...+.+..|..+++. .|.+.+++.+.|.+++..
T Consensus 83 pii~~s~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~i~~~~~~ 127 (142)
T 3cg4_A 83 AIVMLTAKNAPDAKMIGLQEYVVDYIT----------KPFDNEDLIEKTTFFMGF 127 (142)
T ss_dssp EEEEEECTTCCCCSSTTGGGGEEEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHhcCccEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 66654322 234455567788887 899999999999999875
No 86
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=57.12 E-value=13 Score=36.58 Aligned_cols=44 Identities=18% Similarity=0.068 Sum_probs=32.3
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.+++..+|++|--+..+..--.+..++..|+|+|+..+|--.+
T Consensus 67 l~~ll~~~DVVIDfT~p~a~~~~~~~al~~G~~vVigTTG~s~~ 110 (272)
T 4f3y_A 67 IERVCAEADYLIDFTLPEGTLVHLDAALRHDVKLVIGTTGFSEP 110 (272)
T ss_dssp HHHHHHHCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCHH
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCHH
Confidence 44577899999977655544445677899999999988775443
No 87
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=56.51 E-value=80 Score=25.72 Aligned_cols=111 Identities=12% Similarity=0.067 Sum_probs=68.6
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH---------hcCEEEeCCCC-CCCcHHHHHHHH--
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---------GADFILIPSRF-EPCGLIQLHAMR-- 499 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~---------~adi~l~pS~~-E~~gl~~lEAma-- 499 (612)
+.+++|+.+.. ...+.+++.....+.......--+...+...+. ..|++++-... +.-|+.+++.+.
T Consensus 2 ~~~ilivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~~~~~~~g~~~~~~l~~~ 80 (140)
T 1k68_A 2 HKKIFLVEDNK-ADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEYANASRPDLILLXLNLPKKDGREVLAEIKSD 80 (140)
T ss_dssp CCEEEEECCCH-HHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGGGSCCCCSEEEECSSCSSSCHHHHHHHHHHS
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHcccccccCCCCcEEEEecCCCcccHHHHHHHHHcC
Confidence 34677777654 345566666555553112222234455545555 36888876544 446777777765
Q ss_pred ---cCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 500 ---YGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 500 ---~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
..+|+|.-.... ..+....|..+++. .|.+.+++.+.|.+++..
T Consensus 81 ~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 131 (140)
T 1k68_A 81 PTLKRIPVVVLSTSINEDDIFHSYDLHVNCYIT----------KSANLSQLFQIVKGIEEF 131 (140)
T ss_dssp TTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHHH
T ss_pred cccccccEEEEecCCcHHHHHHHHHhchhheec----------CCCCHHHHHHHHHHHHHH
Confidence 457776654322 23344567889987 899999999999998875
No 88
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=55.39 E-value=97 Score=26.36 Aligned_cols=111 Identities=13% Similarity=0.180 Sum_probs=71.5
Q ss_pred cCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh--cCEEEeCCCC-CCCcHHHHHHHH-----cC
Q 007224 430 KENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMR-----YG 501 (612)
Q Consensus 430 ~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~--adi~l~pS~~-E~~gl~~lEAma-----~G 501 (612)
..+.+++|+-+.+ ...+.++++-.+.+-..... --++..+-+.+.. -|++++=-.. +--|+-+++.+. ..
T Consensus 10 ~k~~rILiVDD~~-~~r~~l~~~L~~~G~~~v~~-a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ 87 (134)
T 3to5_A 10 NKNMKILIVDDFS-TMRRIVKNLLRDLGFNNTQE-ADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKH 87 (134)
T ss_dssp CTTCCEEEECSCH-HHHHHHHHHHHHTTCCCEEE-ESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTT
T ss_pred CCCCEEEEEeCCH-HHHHHHHHHHHHcCCcEEEE-ECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCC
Confidence 3577888887654 45666666666665322221 2355555555544 5777764433 446888888875 46
Q ss_pred CceEEcCCCCccc----ceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 502 TVPIVASTGGLVD----TVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 502 ~PvI~s~~gg~~e----~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
+|||.-..-+-.+ ..+-|.++|+. .|.++++|.+.|.++++
T Consensus 88 ipvI~lTa~~~~~~~~~~~~~Ga~~yl~----------KP~~~~~L~~~i~~~l~ 132 (134)
T 3to5_A 88 LPVLMITAEAKREQIIEAAQAGVNGYIV----------KPFTAATLKEKLDKIFE 132 (134)
T ss_dssp CCEEEEESSCCHHHHHHHHHTTCCEEEE----------SSCCHHHHHHHHHHHCC
T ss_pred CeEEEEECCCCHHHHHHHHHCCCCEEEE----------CCCCHHHHHHHHHHHHh
Confidence 7887654333332 34468889987 99999999999998864
No 89
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=55.37 E-value=7.7 Score=36.07 Aligned_cols=33 Identities=27% Similarity=0.495 Sum_probs=26.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..+++.|.++||+|.+++..
T Consensus 1 M~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGS-------TGRVG---KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 78877764 47777 56788899999999999765
No 90
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=55.35 E-value=13 Score=30.82 Aligned_cols=40 Identities=18% Similarity=0.061 Sum_probs=30.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhC-CC-eEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GH-RVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~-Gh-~V~vit~~ 127 (612)
||++++... .|+ ..........++.++++. || +|.++...
T Consensus 2 ~k~~ii~~~-~p~--~~~~~~~al~~a~~~~~~~g~~~v~vff~~ 43 (117)
T 1jx7_A 2 QKIVIVANG-APY--GSESLFNSLRLAIALREQESNLDLRLFLMS 43 (117)
T ss_dssp CEEEEEECC-CTT--TCSHHHHHHHHHHHHHHHCTTCEEEEEECG
T ss_pred cEEEEEEcC-CCC--CcHHHHHHHHHHHHHHhcCCCccEEEEEEc
Confidence 478888876 565 334555678889999999 99 99888765
No 91
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=55.35 E-value=9.4 Score=37.08 Aligned_cols=35 Identities=34% Similarity=0.391 Sum_probs=25.9
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|++|||++++ . |++| ..|++.|.++||+|++++..
T Consensus 1 M~~~~ilVtG-a-------G~iG---~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 1 MSLSKILIAG-C-------GDLG---LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp -CCCCEEEEC-C-------SHHH---HHHHHHHHHTTCCEEEEECT
T ss_pred CCCCcEEEEC-C-------CHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 4568888775 2 5566 45788899999999999765
No 92
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=53.42 E-value=13 Score=32.33 Aligned_cols=41 Identities=12% Similarity=0.014 Sum_probs=31.0
Q ss_pred Cc-eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GL-NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~M-kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.| |++|+... .|+ ..-...-...++.++++.||+|.|+-..
T Consensus 4 ~Mkk~~ivv~~-~P~--g~~~~~~al~~a~a~~a~~~~v~Vff~~ 45 (136)
T 2hy5_B 4 VVKKFMYLNRK-APY--GTIYAWEALEVVLIGAAFDQDVCVLFLD 45 (136)
T ss_dssp -CCEEEEEECS-CTT--TSSHHHHHHHHHHHHGGGCCEEEEEECG
T ss_pred chhEEEEEEeC-CCC--CcHHHHHHHHHHHHHHhCCCCEEEEEEh
Confidence 47 49999865 675 3345666788899999999999988765
No 93
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=53.04 E-value=9.4 Score=38.08 Aligned_cols=37 Identities=30% Similarity=0.487 Sum_probs=27.9
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
...+|+|++++. +|++| ..|++.|+++||+|.++...
T Consensus 17 ~~~~~~vlVTGa-------sG~iG---~~l~~~L~~~g~~V~~~~r~ 53 (330)
T 2pzm_A 17 RGSHMRILITGG-------AGCLG---SNLIEHWLPQGHEILVIDNF 53 (330)
T ss_dssp TTTCCEEEEETT-------TSHHH---HHHHHHHGGGTCEEEEEECC
T ss_pred cCCCCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 355788877754 47777 55778899999999998754
No 94
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=52.85 E-value=16 Score=33.35 Aligned_cols=41 Identities=10% Similarity=0.068 Sum_probs=32.0
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|..|||++|..+ | .|-...++..+++.+.+.|++|.++-..
T Consensus 3 M~M~kilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 3 MSSPYILVLYYS--R---HGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp --CCEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CCcceEEEEEeC--C---CChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 445799999864 4 5778888888999999999999988654
No 95
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=52.73 E-value=81 Score=25.91 Aligned_cols=106 Identities=12% Similarity=0.218 Sum_probs=59.1
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCCCCCcHHHHHHHH--c-CCceEE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFEPCGLIQLHAMR--Y-GTVPIV 506 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~E~~gl~~lEAma--~-G~PvI~ 506 (612)
..+++|+.+.. .....++++....+-.+. ..-+...+...+. ..|++|+| +.-|+.+++.+. . .+|+|.
T Consensus 18 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~dlvi~~---~~~g~~~~~~l~~~~~~~~ii~ 91 (137)
T 2pln_A 18 SMRVLLIEKNS-VLGGEIEKGLNVKGFMAD--VTESLEDGEYLMDIRNYDLVMVS---DKNALSFVSRIKEKHSSIVVLV 91 (137)
T ss_dssp CSEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHHHHHSCCSEEEEC---STTHHHHHHHHHHHSTTSEEEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHHcCcEEE--EeCCHHHHHHHHHcCCCCEEEEc---CccHHHHHHHHHhcCCCccEEE
Confidence 45666666543 234444444444332222 2223333333333 35777722 334666666554 3 677776
Q ss_pred cCCCC----cccceecCceEEEecccccccCCCCCC-CHHHHHHHHHHHHHh
Q 007224 507 ASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV-DVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~-d~~~la~~l~~ll~~ 553 (612)
-.... ..+.+..|..+++. .|. +.+++...|.+++..
T Consensus 92 ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 92 SSDNPTSEEEVHAFEQGADDYIA----------KPYRSIKALVARIEARLRF 133 (137)
T ss_dssp EESSCCHHHHHHHHHTTCSEEEE----------SSCSCHHHHHHHHHHHTC-
T ss_pred EeCCCCHHHHHHHHHcCCceeee----------CCCCCHHHHHHHHHHHHhh
Confidence 54322 23344567788987 899 999999999988764
No 96
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=52.61 E-value=9.7 Score=37.87 Aligned_cols=36 Identities=28% Similarity=0.286 Sum_probs=25.6
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|++|+|++++. +|++| ..|++.|+++||+|.++...
T Consensus 1 m~~~~vlVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 1 MSGKRALITGI-------RGQDG---AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp --CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCCCEEEEECC-------CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 34678776654 47777 55778899999999988654
No 97
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=51.71 E-value=17 Score=34.43 Aligned_cols=40 Identities=10% Similarity=0.094 Sum_probs=33.0
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.+||.+||+..- ..-|-..++..|+.+|+++|++|..+=|
T Consensus 2 ~~mk~i~Itgt~----t~vGKT~vt~~L~~~l~~~G~~V~~~KP 41 (228)
T 3of5_A 2 NAMKKFFIIGTD----TEVGKTYISTKLIEVCEHQNIKSLCLKP 41 (228)
T ss_dssp TTCEEEEEEESS----SSSCHHHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCCcEEEEEeCC----CCCCHHHHHHHHHHHHHHCCCeeEEecc
Confidence 469999999762 2468888999999999999999988744
No 98
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=51.69 E-value=13 Score=35.73 Aligned_cols=39 Identities=21% Similarity=0.297 Sum_probs=28.8
Q ss_pred CCceEEEEeccccCccccccH--HHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGL--GDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~--~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+||++.|+.. .||+ .+.+..||.+|+++|++|.+|=..
T Consensus 4 ~~~~vI~v~s~------kGGvGKTt~a~~LA~~la~~g~~VlliD~D 44 (257)
T 1wcv_1 4 AKVRRIALANQ------KGGVGKTTTAINLAAYLARLGKRVLLVDLD 44 (257)
T ss_dssp -CCCEEEECCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCEEEEEEeC------CCCchHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 35787777643 4555 567788999999999999998543
No 99
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=51.67 E-value=13 Score=36.36 Aligned_cols=41 Identities=24% Similarity=0.293 Sum_probs=28.0
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..|||+.|+.. -+ .-|-.+.+..|+.+|+++|++|.+|=..
T Consensus 2 ~M~kvI~v~s~-KG---GvGKTT~a~nLA~~La~~G~~VlliD~D 42 (286)
T 2xj4_A 2 AETRVIVVGNE-KG---GAGKSTIAVHLVTALLYGGAKVAVIDLD 42 (286)
T ss_dssp --CEEEEECCS-SS---CTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEEcC-CC---CCCHHHHHHHHHHHHHHCCCcEEEEECC
Confidence 34567777643 01 2356677888999999999999988544
No 100
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=51.52 E-value=1e+02 Score=25.39 Aligned_cols=107 Identities=11% Similarity=0.085 Sum_probs=61.2
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH-----cCCce
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-----YGTVP 504 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma-----~G~Pv 504 (612)
.+++|+.+.. .....++++..+. ..+. .--+...+...+. ..|++++-... +.-|+.+++.+. ..+|+
T Consensus 4 ~~iLivdd~~-~~~~~l~~~l~~~-~~v~--~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~i 79 (140)
T 3n53_A 4 KKILIIDQQD-FSRIELKNFLDSE-YLVI--ESKNEKEALEQIDHHHPDLVILDMDIIGENSPNLCLKLKRSKGLKNVPL 79 (140)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTT-SEEE--EESSHHHHHHHHHHHCCSEEEEETTC------CHHHHHHTSTTCTTCCE
T ss_pred CEEEEEeCCH-HHHHHHHHHHHhc-ceEE--EeCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHcCcccCCCCE
Confidence 4566766544 3444555554443 2222 1223444333333 45888875543 345666666665 46777
Q ss_pred EEcCCC----CcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 505 IVASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|.-... ...+.+..|..+++. .|.+.+++.+.|.+++..
T Consensus 80 i~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 122 (140)
T 3n53_A 80 ILLFSSEHKEAIVNGLHSGADDYLT----------KPFNRNDLLSRIEIHLRT 122 (140)
T ss_dssp EEEECC----CTTTTTTCCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHhcCCCeeee----------CCCCHHHHHHHHHHHHhh
Confidence 765332 234455667889987 899999999999999875
No 101
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=51.47 E-value=97 Score=25.16 Aligned_cols=109 Identities=14% Similarity=0.135 Sum_probs=65.3
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--HhcCEEEeCCCC-CCCcHHHHHHHHc---CCceEE
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY---GTVPIV 506 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l--~~adi~l~pS~~-E~~gl~~lEAma~---G~PvI~ 506 (612)
++++|+.+.. .....++++..+.+..+..... +.+.+...+ ...|++++-... +.-|+.+++.+.. .+|+|.
T Consensus 2 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~~~-~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 79 (134)
T 3f6c_A 2 LNAIIIDDHP-LAIAAIRNLLIKNDIEILAELT-EGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIII 79 (134)
T ss_dssp EEEEEECCCH-HHHHHHHHHHHHTTEEEEEEES-SSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEE
T ss_pred eEEEEEcCCH-HHHHHHHHHHhhCCcEEEEEcC-CHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEE
Confidence 4677777654 3455666665555522321222 222222233 356888876544 4567777776653 566665
Q ss_pred cCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 507 ASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-.... ..+.+..|..+++. .|.+.+++.++|.+++..
T Consensus 80 ~s~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~i~~~~~~ 120 (134)
T 3f6c_A 80 VSAKNDHFYGKHCADAGANGFVS----------KKEGMNNIIAAIEAAKNG 120 (134)
T ss_dssp EECC---CTHHHHHHTTCSEEEE----------GGGCTHHHHHHHHHHHTT
T ss_pred EeCCCChHHHHHHHHhCCCEEEe----------CCCCHHHHHHHHHHHHCC
Confidence 43222 33445568889987 899999999999999875
No 102
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=51.45 E-value=11 Score=37.97 Aligned_cols=36 Identities=19% Similarity=0.164 Sum_probs=26.1
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.+|+|++++. +|++| ..+++.|.++||+|.+++..
T Consensus 8 M~~~~IlVtGa-------tG~iG---~~l~~~L~~~g~~V~~l~R~ 43 (346)
T 3i6i_A 8 SPKGRVLIAGA-------TGFIG---QFVATASLDAHRPTYILARP 43 (346)
T ss_dssp ---CCEEEECT-------TSHHH---HHHHHHHHHTTCCEEEEECS
T ss_pred CCCCeEEEECC-------CcHHH---HHHHHHHHHCCCCEEEEECC
Confidence 55678888765 47777 45777899999999998865
No 103
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=50.86 E-value=1.1e+02 Score=25.62 Aligned_cols=111 Identities=18% Similarity=0.227 Sum_probs=66.3
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc---CCceE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~---G~PvI 505 (612)
-.+++|+.+.. ...+.++++....+.......--+.+.+...+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 20 m~~iLivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii 98 (150)
T 4e7p_A 20 HMKVLVAEDQS-MLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVV 98 (150)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEE
T ss_pred ccEEEEEcCCH-HHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEE
Confidence 35677776544 344555555544432111111224444444443 35777775543 4567777776653 56776
Q ss_pred EcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.-.... ..+.+..|..+++. .|.+.+++.++|.+++..
T Consensus 99 ~ls~~~~~~~~~~~~~~g~~~~l~----------Kp~~~~~l~~~i~~~~~~ 140 (150)
T 4e7p_A 99 VVTTFKRAGYFERAVKAGVDAYVL----------KERSIADLMQTLHTVLEG 140 (150)
T ss_dssp EEESCCCHHHHHHHHHTTCSEEEE----------TTSCHHHHHHHHHHHHTT
T ss_pred EEeCCCCHHHHHHHHHCCCcEEEe----------cCCCHHHHHHHHHHHHcC
Confidence 654332 33455668889987 899999999999999875
No 104
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=50.78 E-value=15 Score=30.99 Aligned_cols=34 Identities=29% Similarity=0.550 Sum_probs=24.0
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..|||++++. |.+| ..++..|.+.||+|+++...
T Consensus 3 ~~m~i~IiG~--------G~iG---~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 3 HGMYIIIAGI--------GRVG---YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp --CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 3589988852 4444 45788899999999988654
No 105
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=50.39 E-value=12 Score=34.20 Aligned_cols=34 Identities=26% Similarity=0.510 Sum_probs=24.7
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|||++++. .||+| ..+++.|+ +|++|.++...
T Consensus 2 ~kM~vlVtGa-------sg~iG---~~~~~~l~-~g~~V~~~~r~ 35 (202)
T 3d7l_A 2 NAMKILLIGA-------SGTLG---SAVKERLE-KKAEVITAGRH 35 (202)
T ss_dssp CSCEEEEETT-------TSHHH---HHHHHHHT-TTSEEEEEESS
T ss_pred CCcEEEEEcC-------CcHHH---HHHHHHHH-CCCeEEEEecC
Confidence 3588766653 47777 55778888 99999887644
No 106
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=50.29 E-value=9 Score=36.16 Aligned_cols=25 Identities=16% Similarity=0.142 Sum_probs=20.1
Q ss_pred cccHHHHhhhhHHHHHhCC-CeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~G-h~V~vit~~ 127 (612)
+||+| ..+++.|+++| ++|.+++..
T Consensus 32 tG~iG---~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 32 GGQIA---RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp TSHHH---HHHHHHHTTCTTEEEEEEESS
T ss_pred CcHHH---HHHHHHHHhCCCceEEEEEcC
Confidence 57777 56788899999 899988755
No 107
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=50.26 E-value=11 Score=37.98 Aligned_cols=35 Identities=31% Similarity=0.381 Sum_probs=26.3
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|..|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 1 M~~mkI~IiGa--------G~~G---~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MSLTRICIVGA--------GAVG---GYLGARLALAGEAINVLARG 35 (335)
T ss_dssp -CCCCEEEESC--------CHHH---HHHHHHHHHTTCCEEEECCH
T ss_pred CCCCEEEEECc--------CHHH---HHHHHHHHHCCCEEEEEECh
Confidence 45699999973 5555 44677899999999999753
No 108
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=50.10 E-value=1e+02 Score=25.02 Aligned_cols=110 Identities=13% Similarity=0.150 Sum_probs=66.6
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH-H--hcCEEEeCCCC-CCCcHHHHHHHHc-----CC
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII-A--GADFILIPSRF-EPCGLIQLHAMRY-----GT 502 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l-~--~adi~l~pS~~-E~~gl~~lEAma~-----G~ 502 (612)
..+++|+.+.. .....++++..+.+...... .-+....-..+ . ..|++++-... +.-|+.+++.+.. .+
T Consensus 5 ~~~iLivdd~~-~~~~~l~~~L~~~g~~~v~~-~~~~~~a~~~~~~~~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~ 82 (129)
T 3h1g_A 5 SMKLLVVDDSS-TMRRIIKNTLSRLGYEDVLE-AEHGVEAWEKLDANADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEI 82 (129)
T ss_dssp -CCEEEECSCH-HHHHHHHHHHHHTTCCCEEE-ESSHHHHHHHHHHCTTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTC
T ss_pred CcEEEEEeCCH-HHHHHHHHHHHHcCCcEEEE-eCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCC
Confidence 34677777654 35556666655555321221 22333333333 2 36788764433 4567888887763 56
Q ss_pred ceEEcCCCCc----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 503 VPIVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 503 PvI~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|+|......- .+.+..|..+|+. .|.+.+++.+.|+.++..
T Consensus 83 pii~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~L~~~l~~~l~~ 127 (129)
T 3h1g_A 83 PIIMITAEGGKAEVITALKAGVNNYIV----------KPFTPQVLKEKLEVVLGT 127 (129)
T ss_dssp CEEEEESCCSHHHHHHHHHHTCCEEEE----------SCCCHHHHHHHHHHHHCC
T ss_pred eEEEEeCCCChHHHHHHHHcCccEEEe----------CCCCHHHHHHHHHHHhcc
Confidence 7776543222 2345568889987 999999999999988753
No 109
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=49.83 E-value=9.7 Score=38.83 Aligned_cols=30 Identities=23% Similarity=0.439 Sum_probs=24.1
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEE
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vi 124 (612)
.|||++|+.. ..|+. +|..|+++|++|+|+
T Consensus 1 sm~V~IVGaG------paGl~-----~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 1 SMHVGIIGAG------IGGTC-----LAHGLRKHGIKVTIY 30 (412)
T ss_dssp CCEEEEECCS------HHHHH-----HHHHHHHTTCEEEEE
T ss_pred CCEEEEECcC------HHHHH-----HHHHHHhCCCCEEEE
Confidence 3999999853 24555 788899999999998
No 110
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=49.78 E-value=1.1e+02 Score=25.09 Aligned_cols=109 Identities=15% Similarity=0.145 Sum_probs=67.0
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc---CCceE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~---G~PvI 505 (612)
..+++|+.+... ....++++..+....+... -+...+...+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 7 ~~~ilivdd~~~-~~~~l~~~L~~~~~~v~~~--~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (137)
T 3hdg_A 7 ALKILIVEDDTD-AREWLSTIISNHFPEVWSA--GDGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVI 83 (137)
T ss_dssp CCCEEEECSCHH-HHHHHHHHHHTTCSCEEEE--SSHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEE
T ss_pred ccEEEEEeCCHH-HHHHHHHHHHhcCcEEEEE--CCHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEE
Confidence 467788876543 4455555554433223222 23444333333 46888876543 4567777766653 67777
Q ss_pred EcCCCCc----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+.....- .+.+..|..+++. .|.+.+++.+.|.++++.
T Consensus 84 ~~s~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 125 (137)
T 3hdg_A 84 VISAFSEMKYFIKAIELGVHLFLP----------KPIEPGRLMETLEDFRHI 125 (137)
T ss_dssp ECCCCCCHHHHHHHHHHCCSEECC----------SSCCHHHHHHHHHHHHHH
T ss_pred EEecCcChHHHHHHHhCCcceeEc----------CCCCHHHHHHHHHHHHHH
Confidence 6653332 2345567888876 899999999999999975
No 111
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=49.41 E-value=11 Score=40.15 Aligned_cols=40 Identities=15% Similarity=0.044 Sum_probs=29.2
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhC-CCeEEEEeecC
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPRY 128 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~-Gh~V~vit~~~ 128 (612)
++|+|+++.. | ..|--.-...|++.|+++ ||+|+++++..
T Consensus 5 ~~~~vl~~p~---p---~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~ 45 (480)
T 2vch_A 5 KTPHVAIIPS---P---GMGHLIPLVEFAKRLVHLHGLTVTFVIAGE 45 (480)
T ss_dssp -CCEEEEECC---S---CHHHHHHHHHHHHHHHHHHCCEEEEEECCS
T ss_pred CCcEEEEecC---c---chhHHHHHHHHHHHHHhCCCCEEEEEECCC
Confidence 3578888852 3 234444567799999998 99999999763
No 112
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=48.96 E-value=20 Score=34.60 Aligned_cols=42 Identities=24% Similarity=0.175 Sum_probs=34.6
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|.+.||.+||+..- ..-|-..++..|+.+|.++|++|..+=|
T Consensus 22 ~~~~m~~i~Itgt~----t~vGKT~vt~gL~~~l~~~G~~V~~fKP 63 (251)
T 3fgn_A 22 FQSHMTILVVTGTG----TGVGKTVVCAALASAARQAGIDVAVCKP 63 (251)
T ss_dssp CCSSCEEEEEEESS----TTSCHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred cccCCCEEEEEeCC----CCCcHHHHHHHHHHHHHHCCCeEEEEee
Confidence 34579999999762 2468888999999999999999998865
No 113
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=48.84 E-value=1.1e+02 Score=24.97 Aligned_cols=109 Identities=19% Similarity=0.208 Sum_probs=67.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh---cCEEEeCCCC-CCCcHHHHHHHHc----CCc
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG---ADFILIPSRF-EPCGLIQLHAMRY----GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~---adi~l~pS~~-E~~gl~~lEAma~----G~P 503 (612)
..+++|+.+.. .....++++..+.+-.+... -+.......+.. .|++++-... +.-|+.+++.+.. .+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~~~--~~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~ 83 (136)
T 3hdv_A 7 RPLVLVVDDNA-VNREALILYLKSRGIDAVGA--DGAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALS 83 (136)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCCEEEE--SSHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCE
T ss_pred CCeEEEECCCH-HHHHHHHHHHHHcCceEEEe--CCHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCC
Confidence 45777877654 34555666555555334332 234433333332 5777775443 4567788877754 367
Q ss_pred eEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 504 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|...... ..+.+..|..+++. .|.+.+++.++|+++...
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 127 (136)
T 3hdv_A 84 IIVVSGDTDVEEAVDVMHLGVVDFLL----------KPVDLGKLLELVNKELKI 127 (136)
T ss_dssp EEEEESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHC-
T ss_pred EEEEeCCCChHHHHHHHhCCcceEEe----------CCCCHHHHHHHHHHHhcC
Confidence 76654332 23345567889987 999999999999999875
No 114
>2d1p_B TUSC, hypothetical UPF0116 protein YHEM; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=48.47 E-value=21 Score=30.05 Aligned_cols=39 Identities=21% Similarity=0.029 Sum_probs=29.5
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|++|+... .|+ ..-.+.-...++.++.+.||+|.|+-..
T Consensus 3 k~~~vv~~-~P~--g~~~~~~al~~a~a~~a~~~~v~vff~~ 41 (119)
T 2d1p_B 3 RIAFVFST-APH--GTAAGREGLDALLATSALTDDLAVFFIA 41 (119)
T ss_dssp CEEEEECS-CTT--TSTHHHHHHHHHHHHHTTCSCEEEEECG
T ss_pred EEEEEEcC-CCC--CcHHHHHHHHHHHHHHhCCCCEEEEEeh
Confidence 58888876 675 3334556678999999999999888765
No 115
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=48.26 E-value=14 Score=36.92 Aligned_cols=39 Identities=18% Similarity=0.261 Sum_probs=25.4
Q ss_pred cccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 79 IVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 79 ~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.....+|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 16 ~~~~~~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 16 PRGSHMKKVFITGI-------CGQIG---SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp -----CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred eecCCCCEEEEeCC-------ccHHH---HHHHHHHHHCCCEEEEEECC
Confidence 33344577766653 47777 45778899999999998754
No 116
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=47.72 E-value=16 Score=34.72 Aligned_cols=34 Identities=26% Similarity=0.524 Sum_probs=25.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 1 mk~vlVTGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (257)
T 1fjh_A 1 MSIIVISGC------ATGIG---AATRKVLEAAGHQIVGIDIR 34 (257)
T ss_dssp CCEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 676777643 57777 56788899999999887644
No 117
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=47.54 E-value=14 Score=36.89 Aligned_cols=38 Identities=26% Similarity=0.335 Sum_probs=25.5
Q ss_pred ccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..+.+|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 23 ~~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 60 (343)
T 2b69_A 23 MEKDRKRILITGG-------AGFVG---SHLTDKLMMDGHEVTVVDNF 60 (343)
T ss_dssp ----CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred cccCCCEEEEEcC-------ccHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3455677776653 47777 55778899999999998754
No 118
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=46.98 E-value=13 Score=37.71 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=26.4
Q ss_pred cccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhC-CCeEEEEeec
Q 007224 79 IVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 79 ~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~-Gh~V~vit~~ 127 (612)
+..|.+|||++++. +|++| ..|++.|.++ ||+|+++...
T Consensus 19 ~~~m~~~~vlVtGa-------tG~iG---~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 19 PGSMKAKKVLILGV-------NGFIG---HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp ----CCCEEEEESC-------SSHHH---HHHHHHHHHHSSCEEEEEESC
T ss_pred CcccCCCEEEEECC-------CChHH---HHHHHHHHhCCCCEEEEEeCC
Confidence 34455678877654 47777 5577788888 9999999865
No 119
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=46.73 E-value=1.3e+02 Score=25.33 Aligned_cols=109 Identities=16% Similarity=0.144 Sum_probs=68.7
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH-----cCCc
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-----YGTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma-----~G~P 503 (612)
..+++|+.+.. .....++++..+.+-.+ ..--+...+-..+. ..|++++-... +.-|+.+++.+. ..+|
T Consensus 7 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v--~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (154)
T 3gt7_A 7 AGEILIVEDSP-TQAEHLKHILEETGYQT--EHVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIP 83 (154)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHTTTCEE--EEESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSC
T ss_pred CCcEEEEeCCH-HHHHHHHHHHHHCCCEE--EEeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCC
Confidence 46777777654 34555555555544323 22224444444554 35888875544 446777777775 3567
Q ss_pred eEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 504 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|+..... ..+.+..|..+|+. .|.+.+++...|.+++..
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~~ 127 (154)
T 3gt7_A 84 VILLTILSDPRDVVRSLECGADDFIT----------KPCKDVVLASHVKRLLSG 127 (154)
T ss_dssp EEEEECCCSHHHHHHHHHHCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHCCCCEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 77654322 22345567889987 999999999999999975
No 120
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=46.49 E-value=40 Score=32.03 Aligned_cols=36 Identities=14% Similarity=0.062 Sum_probs=23.4
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhC--CCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~--Gh~V~vit~~ 127 (612)
.+|||+|+.+. .+.....+..+|.+. +++|..+...
T Consensus 21 ~~~rI~~l~SG---------~g~~~~~~l~~l~~~~~~~~I~~Vvt~ 58 (229)
T 3auf_A 21 HMIRIGVLISG---------SGTNLQAILDGCREGRIPGRVAVVISD 58 (229)
T ss_dssp TCEEEEEEESS---------CCHHHHHHHHHHHTTSSSEEEEEEEES
T ss_pred CCcEEEEEEeC---------CcHHHHHHHHHHHhCCCCCeEEEEEcC
Confidence 35799999642 123566677778776 6787655544
No 121
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=46.40 E-value=15 Score=35.60 Aligned_cols=37 Identities=30% Similarity=0.475 Sum_probs=28.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
||||+.+.. |=.+.-+..|.++|.+.| +|+|++|...
T Consensus 2 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~ 38 (251)
T 2phj_A 2 PTFLLVNDD-------GYFSPGINALREALKSLG-RVVVVAPDRN 38 (251)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CEEEEECCC-------CCCCHHHHHHHHHHHhcC-CEEEEecCCC
Confidence 899998865 212345788999999988 9999999744
No 122
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=46.28 E-value=16 Score=36.18 Aligned_cols=34 Identities=29% Similarity=0.409 Sum_probs=26.0
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++++. +|++| ..|++.|.++||+|.+++..
T Consensus 13 ~M~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 13 HVKYAVLGA-------TGLLG---HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 478877754 47777 55777899999999998765
No 123
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=46.06 E-value=16 Score=35.24 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=27.5
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|..+|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 22 ~m~~~k~vlITGa------s~gIG---~a~a~~l~~~G~~V~~~~~~ 59 (272)
T 4e3z_A 22 SMSDTPVVLVTGG------SRGIG---AAVCRLAARQGWRVGVNYAA 59 (272)
T ss_dssp --CCSCEEEETTT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred hccCCCEEEEECC------CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 3556778888643 57777 57888999999999887544
No 124
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=45.99 E-value=17 Score=34.17 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=23.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 1 Mk~vlVtGa------sg~iG---~~l~~~L~~~g~~V~~~~r~ 34 (255)
T 2dkn_A 1 MSVIAITGS------ASGIG---AALKELLARAGHTVIGIDRG 34 (255)
T ss_dssp -CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEeCC------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 555555532 57777 55788899999999888654
No 125
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=45.30 E-value=1.1e+02 Score=25.43 Aligned_cols=110 Identities=15% Similarity=0.175 Sum_probs=60.6
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCC-CceEEEeccChHHHHHHH---HhcCEEEeCCCC-CCCcHHHHHHHHc---CCc
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMII---AGADFILIPSRF-EPCGLIQLHAMRY---GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~-~~i~~~~~~~~~~~~~~l---~~adi~l~pS~~-E~~gl~~lEAma~---G~P 503 (612)
..+++|+.+... ....++++..+.+ -.+.... -..+.+..+. ...|++|+-... +.-|+.+++.+.. .+|
T Consensus 20 ~~~ilivdd~~~-~~~~l~~~L~~~g~~~v~~~~-~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ 97 (146)
T 4dad_A 20 MINILVASEDAS-RLAHLARLVGDAGRYRVTRTV-GRAAQIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLHPGLT 97 (146)
T ss_dssp GCEEEEECSCHH-HHHHHHHHHHHHCSCEEEEEC-CCHHHHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHCTTCE
T ss_pred CCeEEEEeCCHH-HHHHHHHHHhhCCCeEEEEeC-CHHHHHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhCCCCc
Confidence 456666665432 3344444444433 2222211 1122222222 346777775443 3345555555543 567
Q ss_pred eEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 504 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|.-.... ..+.+..|..+|+. .|.+.++|..+|.+++..
T Consensus 98 ii~lt~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 141 (146)
T 4dad_A 98 CLLVTTDASSQTLLDAMRAGVRDVLR----------WPLEPRALDDALKRAAAQ 141 (146)
T ss_dssp EEEEESCCCHHHHHHHHTTTEEEEEE----------SSCCHHHHHHHHHHHHHT
T ss_pred EEEEeCCCCHHHHHHHHHhCCceeEc----------CCCCHHHHHHHHHHHHhh
Confidence 76654322 23345567888987 899999999999999875
No 126
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=45.27 E-value=14 Score=34.77 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=25.9
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|..|||.+|+. |. +-..++..|++.||+|++++.+
T Consensus 21 m~mmkI~IIG~--------G~---mG~~la~~l~~~g~~V~~v~~r 55 (220)
T 4huj_A 21 QSMTTYAIIGA--------GA---IGSALAERFTAAQIPAIIANSR 55 (220)
T ss_dssp GGSCCEEEEEC--------HH---HHHHHHHHHHHTTCCEEEECTT
T ss_pred hcCCEEEEECC--------CH---HHHHHHHHHHhCCCEEEEEECC
Confidence 55689999963 33 3356888899999999985544
No 127
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=45.23 E-value=1.3e+02 Score=24.79 Aligned_cols=109 Identities=16% Similarity=0.128 Sum_probs=69.0
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH---hcCEEEeCCCC-C-CCcHHHHHHHH--cCCce
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---GADFILIPSRF-E-PCGLIQLHAMR--YGTVP 504 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~---~adi~l~pS~~-E-~~gl~~lEAma--~G~Pv 504 (612)
..+++|+.+.. .....++++..+.+-.+. ...+...+-..+. ..|++++-... + .-|+.+++.+. ..+|+
T Consensus 5 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~i 81 (140)
T 3h5i_A 5 DKKILIVEDSK-FQAKTIANILNKYGYTVE--IALTGEAAVEKVSGGWYPDLILMDIELGEGMDGVQTALAIQQISELPV 81 (140)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHTTCCCSEEEEESSCSSSCCHHHHHHHHHHHCCCCE
T ss_pred CcEEEEEeCCH-HHHHHHHHHHHHcCCEEE--EecChHHHHHHHhcCCCCCEEEEeccCCCCCCHHHHHHHHHhCCCCCE
Confidence 45777777654 345566666555553332 2234555544554 35888876554 3 46676666655 47777
Q ss_pred EEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 505 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|+-.... ..+....|..+|+. .|.+.+++.+.|.++++.
T Consensus 82 i~ls~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~~ 124 (140)
T 3h5i_A 82 VFLTAHTEPAVVEKIRSVTAYGYVM----------KSATEQVLITIVEMALRL 124 (140)
T ss_dssp EEEESSSSCCCCGGGGGSCEEEEEE----------TTCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHhCCCcEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 7654322 33455567888987 999999999999999985
No 128
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=45.09 E-value=13 Score=36.84 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=23.9
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCC--CeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G--h~V~vit~ 126 (612)
|.+|||++++. +|++| ..|+..|.++| |+|.++..
T Consensus 1 M~~m~vlVTGa-------tG~iG---~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 1 MHSMKLLVTGG-------MGFIG---SNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp --CCEEEEETT-------TSHHH---HHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCCeEEEECC-------CchHH---HHHHHHHHHhCCCCEEEEEec
Confidence 45789776653 47777 45677788886 88888764
No 129
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=44.77 E-value=14 Score=36.89 Aligned_cols=38 Identities=29% Similarity=0.358 Sum_probs=24.8
Q ss_pred ccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 80 VCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 80 ~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
...++|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 15 ~~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 15 VPRGSHMILVTGS-------AGRVG---RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp ------CEEEETT-------TSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred cccCCCEEEEECC-------CChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 3445688877754 47777 55778899999999998654
No 130
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=44.52 E-value=16 Score=35.80 Aligned_cols=33 Identities=27% Similarity=0.451 Sum_probs=24.5
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |..| ..++..|++.||+|+++...
T Consensus 3 ~m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r~ 35 (316)
T 2ew2_A 3 AMKIAIAGA--------GAMG---SRLGIMLHQGGNDVTLIDQW 35 (316)
T ss_dssp -CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCeEEEECc--------CHHH---HHHHHHHHhCCCcEEEEECC
Confidence 589999963 4444 45778899999999988653
No 131
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=44.50 E-value=1.2e+02 Score=24.35 Aligned_cols=110 Identities=16% Similarity=0.072 Sum_probs=63.9
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH---hcCEEEeCCCC-C-CCcHHHHHHHH---cCCc
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---GADFILIPSRF-E-PCGLIQLHAMR---YGTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~---~adi~l~pS~~-E-~~gl~~lEAma---~G~P 503 (612)
..+++|+.+.. ...+.+++.....+-.+. .--+...+...+. ..|++++-... + .-|+.+++.+. ..+|
T Consensus 5 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ 81 (132)
T 2rdm_A 5 AVTILLADDEA-ILLLDFESTLTDAGFLVT--AVSSGAKAIEMLKSGAAIDGVVTDIRFCQPPDGWQVARVAREIDPNMP 81 (132)
T ss_dssp SCEEEEECSSH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHTTCCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCC
T ss_pred CceEEEEcCcH-HHHHHHHHHHHHcCCEEE--EECCHHHHHHHHHcCCCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCC
Confidence 46778887654 344555555545443333 2234444444444 35888875443 3 45666666664 3677
Q ss_pred eEEcCCCCcccceecC--ceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 504 PIVASTGGLVDTVEEG--FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 504 vI~s~~gg~~e~v~~g--~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
+|......-.+....+ ..+++. .|.+.+++..+|.+++...
T Consensus 82 ii~~s~~~~~~~~~~~~~~~~~l~----------kP~~~~~l~~~i~~~~~~~ 124 (132)
T 2rdm_A 82 IVYISGHAALEWASNGVPDSIILE----------KPFTSAQLITAVSQLLNAR 124 (132)
T ss_dssp EEEEESSCCTTHHHHSCTTCEEEE----------SSCCHHHHHHHHHHHHHTT
T ss_pred EEEEeCCccHHHHHhhcCCcceEe----------CCCCHHHHHHHHHHHHhcC
Confidence 7765433322222221 125766 8999999999999998763
No 132
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=44.42 E-value=81 Score=24.61 Aligned_cols=105 Identities=12% Similarity=0.020 Sum_probs=60.5
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH-----cCCceE
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-----YGTVPI 505 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma-----~G~PvI 505 (612)
+++++.+.. ...+.+.+.....+-.+.. .-+.+.....+. ..|++++-... +.-|..+++.+. ..+|+|
T Consensus 3 ~iliv~~~~-~~~~~l~~~l~~~g~~v~~--~~~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii 79 (119)
T 2j48_A 3 HILLLEEED-EAATVVCEMLTAAGFKVIW--LVDGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLV 79 (119)
T ss_dssp EEEEECCCH-HHHHHHHHHHHHTTCEEEE--ESCHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCE
T ss_pred EEEEEeCCH-HHHHHHHHHHHhCCcEEEE--ecCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEE
Confidence 566776654 3445555555554433332 223343333333 45888775443 345677777775 456776
Q ss_pred EcCC-CCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHH
Q 007224 506 VAST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRAL 551 (612)
Q Consensus 506 ~s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll 551 (612)
.-.. ....+....|..+++. .|.+.+++.+.+.+++
T Consensus 80 ~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~l~~~~ 116 (119)
T 2j48_A 80 LFLGEPPVDPLLTAQASAILS----------KPLDPQLLLTTLQGLC 116 (119)
T ss_dssp EEESSCCSSHHHHHHCSEECS----------SCSTTHHHHHHHHTTC
T ss_pred EEeCCCCchhhhhcCHHHhcc----------CCCCHHHHHHHHHHHh
Confidence 5432 2222455556777865 8889999999887664
No 133
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=44.31 E-value=16 Score=34.29 Aligned_cols=34 Identities=18% Similarity=0.379 Sum_probs=24.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||+++|+.- .||+| ..++..|+++|++|.++...
T Consensus 1 Mk~vlVTGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGA------SSGLG---AELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEEST------TSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777643 57777 56888899999998887654
No 134
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=44.21 E-value=1.3e+02 Score=24.65 Aligned_cols=108 Identities=14% Similarity=0.102 Sum_probs=66.5
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc-----CCce
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTVP 504 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~-----G~Pv 504 (612)
.+++|+.+.. .....++.+..+.+-.+. .--+...+-..+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 5 ~~iLivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pi 81 (136)
T 3t6k_A 5 HTLLIVDDDD-TVAEMLELVLRGAGYEVR--RAASGEEALQQIYKNLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPI 81 (136)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCE
T ss_pred CEEEEEeCCH-HHHHHHHHHHHHCCCEEE--EeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccE
Confidence 4666766544 345555555555443232 2224444444443 35888875443 4457777777643 5777
Q ss_pred EEcCCCCc----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 505 IVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|.....+- .+.+..|..+|+. .|.+.+++...|.+++..
T Consensus 82 i~~t~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 82 LMLTAQGDISAKIAGFEAGANDYLA----------KPFEPQELVYRVKNILAR 124 (136)
T ss_dssp EEEECTTCHHHHHHHHHHTCSEEEE----------TTCCHHHHHHHHHHHHHC
T ss_pred EEEecCCCHHHHHHHHhcCcceEEe----------CCCCHHHHHHHHHHHHhc
Confidence 76543322 2344568889987 999999999999999875
No 135
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=43.90 E-value=15 Score=36.64 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=26.9
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+.+|+|++++. +|++| ..|+..|.++||+|.+++..
T Consensus 23 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 23 FSPKTWLITGV-------AGFIG---SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp HSCCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CCCCeEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34678877654 46677 56788899999999998764
No 136
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=43.85 E-value=12 Score=37.00 Aligned_cols=35 Identities=14% Similarity=0.306 Sum_probs=24.8
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|.+|||++++. +|++| ..|++.|.++||+|.++..
T Consensus 1 M~~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~v~~~~r 35 (321)
T 1e6u_A 1 MAKQRVFIAGH-------RGMVG---SAIRRQLEQRGDVELVLRT 35 (321)
T ss_dssp -CCEEEEEETT-------TSHHH---HHHHHHHTTCTTEEEECCC
T ss_pred CCCCEEEEECC-------CcHHH---HHHHHHHHhCCCeEEEEec
Confidence 44688877654 46666 5577889999999887653
No 137
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=43.29 E-value=18 Score=33.42 Aligned_cols=33 Identities=21% Similarity=0.411 Sum_probs=24.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..+++.|.++||+|.+++..
T Consensus 5 ~~ilItGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLIGA-------SGFVG---SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEETC-------CHHHH---HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEEcC-------CchHH---HHHHHHHHHCCCEEEEEEcC
Confidence 56666543 46666 56788899999999999765
No 138
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=43.21 E-value=1.4e+02 Score=24.56 Aligned_cols=109 Identities=10% Similarity=0.092 Sum_probs=68.0
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCC--ceEEEeccChHHHHHHHH------------hcCEEEeCCCC-CCCcHHHHH
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPE--KARGVAKFNIPLAHMIIA------------GADFILIPSRF-EPCGLIQLH 496 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~--~i~~~~~~~~~~~~~~l~------------~adi~l~pS~~-E~~gl~~lE 496 (612)
..+++|+.+.. .....++++..+.+. .+. .--+...+...+. ..|++++-... +.-|+.+++
T Consensus 6 ~~~iLivdd~~-~~~~~l~~~L~~~g~~~~v~--~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~ 82 (149)
T 1k66_A 6 TQPLLVVEDSD-EDFSTFQRLLQREGVVNPIY--RCITGDQALDFLYQTGSYCNPDIAPRPAVILLDLNLPGTDGREVLQ 82 (149)
T ss_dssp TSCEEEECCCH-HHHHHHHHHHHHTTBCSCEE--EECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECSCCSSSCHHHHHH
T ss_pred CccEEEEECCH-HHHHHHHHHHHHcCCCceEE--EECCHHHHHHHHHhcccccCcccCCCCcEEEEECCCCCCCHHHHHH
Confidence 45677777654 345556665555543 232 2224444444554 35888875544 346777777
Q ss_pred HHH-----cCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 497 AMR-----YGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 497 Ama-----~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.+. ..+|+|+-.... ..+.+..|..+++. .|.+.+++.+.|.+++..
T Consensus 83 ~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 138 (149)
T 1k66_A 83 EIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIV----------KPLEIDRLTETVQTFIKY 138 (149)
T ss_dssp HHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHHH
T ss_pred HHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 775 456776654322 23344567889987 899999999999998875
No 139
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=43.20 E-value=25 Score=31.14 Aligned_cols=38 Identities=16% Similarity=0.136 Sum_probs=30.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+++-.+ + +|....++..++..|.+.|++|.++-..
T Consensus 1 Mkv~IvY~S--~---tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 38 (161)
T 3hly_A 1 MSVLIGYLS--D---YGYSDRLSQAIGRGLVKTGVAVEMVDLR 38 (161)
T ss_dssp -CEEEEECT--T---STTHHHHHHHHHHHHHHTTCCEEEEETT
T ss_pred CEEEEEEEC--C---ChHHHHHHHHHHHHHHhCCCeEEEEECC
Confidence 788888643 3 6999999999999999999999887544
No 140
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=43.07 E-value=17 Score=34.96 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=28.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
||||+.+.. |=.+.-+..|.++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~ 37 (244)
T 2e6c_A 1 MRILVTNDD-------GIYSPGLWALAEAASQFG-EVFVAAPDTE 37 (244)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEECSS
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 899988865 112335788999999888 9999999744
No 141
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=42.96 E-value=16 Score=35.69 Aligned_cols=34 Identities=26% Similarity=0.406 Sum_probs=25.1
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 4 ~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 4 RSRILLIGA-------TGYIG---RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCCEEEEST-------TSTTH---HHHHHHHHHTTCCEEEECCC
T ss_pred CCEEEEEcC-------CcHHH---HHHHHHHHhCCCCEEEEECC
Confidence 467776654 47777 45678899999999888754
No 142
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=42.96 E-value=23 Score=33.62 Aligned_cols=40 Identities=18% Similarity=0.150 Sum_probs=29.3
Q ss_pred CceEEEEeccccCccccccH-HHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGL-GDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~-~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|||++|... |. .++. ...+..+...|.+.||+|.++-..
T Consensus 1 ~mkiLiI~gs--pr--~~S~t~~l~~~~~~~l~~~g~ev~~~dL~ 41 (228)
T 3tem_A 1 GKKVLIVYAH--QE--PKSFNGSLKNVAVDELSRQGCTVTVSDLY 41 (228)
T ss_dssp CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHHTCEEEEEETT
T ss_pred CCEEEEEEeC--CC--CCCHHHHHHHHHHHHHHHCCCEEEEEEhh
Confidence 4899999975 53 3444 445556777788889999998654
No 143
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=42.90 E-value=1.4e+02 Score=24.42 Aligned_cols=111 Identities=14% Similarity=0.196 Sum_probs=67.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHH-CCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc-----CC
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEIL-YPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GT 502 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~-~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~-----G~ 502 (612)
..+++|+.+.. .....++++..+ .+-.+.... -+.+.+...+. ..|++++-... +.-|+.+++.+.. .+
T Consensus 8 ~~~iLivdd~~-~~~~~l~~~L~~~~~~~~v~~~-~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~ 85 (143)
T 3cnb_A 8 DFSILIIEDDK-EFADMLTQFLENLFPYAKIKIA-YNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANI 85 (143)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHHCTTCEEEEE-CSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTS
T ss_pred CceEEEEECCH-HHHHHHHHHHHhccCccEEEEE-CCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCC
Confidence 46777777654 345555555555 443312222 23344433443 35888876544 3467777777754 56
Q ss_pred ceEEcCC-CC---cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHhh
Q 007224 503 VPIVAST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY 554 (612)
Q Consensus 503 PvI~s~~-gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~~ 554 (612)
|+|+... .. ..+.+..|..+++. .|.+.+++.+.|.+++...
T Consensus 86 ~ii~~s~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~~ 131 (143)
T 3cnb_A 86 IVIAMTGALTDDNVSRIVALGAETCFG----------KPLNFTLLEKTIKQLVEQK 131 (143)
T ss_dssp EEEEEESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHTT
T ss_pred cEEEEeCCCCHHHHHHHHhcCCcEEEe----------CCCCHHHHHHHHHHHHHhh
Confidence 7765432 22 13345567889987 8999999999999999763
No 144
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=42.24 E-value=17 Score=35.67 Aligned_cols=34 Identities=26% Similarity=0.339 Sum_probs=25.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..+++.|.++||+|.+++..
T Consensus 4 ~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVGG-------TGYIG---KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEEST-------TSTTH---HHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEcC-------CcHHH---HHHHHHHHhCCCcEEEEECC
Confidence 467777654 47777 45677899999999988754
No 145
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=42.20 E-value=21 Score=34.26 Aligned_cols=37 Identities=22% Similarity=0.211 Sum_probs=27.6
Q ss_pred ceEEEEeccccCccccc--cHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTG--GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~G--G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+.|+.. .| |-.+.+..||.+|+++|++|.++=..
T Consensus 18 ~~vI~v~s~------kGGvGKTT~a~nLA~~la~~G~~VlliD~D 56 (262)
T 2ph1_A 18 KSRIAVMSG------KGGVGKSTVTALLAVHYARQGKKVGILDAD 56 (262)
T ss_dssp SCEEEEECS------SSCTTHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcC------CCCCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 566666543 34 55677888999999999999998644
No 146
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=42.19 E-value=52 Score=33.10 Aligned_cols=44 Identities=23% Similarity=0.311 Sum_probs=33.6
Q ss_pred HHHHHHhcCEEEe--CCCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILI--PSRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~--pS~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++ |..-|+ ++-..+..|--|.-+|-+.-|++.|
T Consensus 188 l~ell~~sDivslh~Plt~~T~~li~~~~l~~mk~~a~lIN~aRG~iVd 236 (334)
T 3kb6_A 188 LDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVD 236 (334)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEEcCCCChhhccCcCHHHHhhcCCCeEEEecCcccccc
Confidence 3568999999986 444455 4556888998899888888888665
No 147
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=42.19 E-value=18 Score=34.82 Aligned_cols=37 Identities=22% Similarity=0.302 Sum_probs=28.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
||||+.+.. |=.+.-+..|.++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDD-------Gi~apGi~aL~~~l~~~g-~V~VVAP~~~ 37 (247)
T 1j9j_A 1 MRILVTNDD-------GIQSKGIIVLAELLSEEH-EVFVVAPDKE 37 (247)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 899988865 112335778999999888 9999999754
No 148
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=42.04 E-value=17 Score=34.16 Aligned_cols=37 Identities=14% Similarity=0.223 Sum_probs=27.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++ +.. + .-|-.+.+..||.+|+++|++|.+|=..
T Consensus 1 mkI~v-s~k--G---GvGKTt~a~~LA~~la~~g~~VlliD~D 37 (254)
T 3kjh_A 1 MKLAV-AGK--G---GVGKTTVAAGLIKIMASDYDKIYAVDGD 37 (254)
T ss_dssp CEEEE-ECS--S---SHHHHHHHHHHHHHHTTTCSCEEEEEEC
T ss_pred CEEEE-ecC--C---CCCHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 78888 532 1 2355667788999999999999999654
No 149
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=41.89 E-value=19 Score=36.15 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=24.7
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+.|||++|+. |.+| ..++..|++.||+|+++...
T Consensus 2 m~~mki~iiG~--------G~~G---~~~a~~L~~~g~~V~~~~r~ 36 (359)
T 1bg6_A 2 IESKTYAVLGL--------GNGG---HAFAAYLALKGQSVLAWDID 36 (359)
T ss_dssp --CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCcCeEEEECC--------CHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 45689999973 5555 34677889999999888543
No 150
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=41.87 E-value=8.9 Score=40.75 Aligned_cols=112 Identities=17% Similarity=0.182 Sum_probs=67.8
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCch------------------hHHHHHHHHHHHCCCceEEEecc
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKK------------------PMEKQLEQLEILYPEKARGVAKF 466 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~------------------~~~~~l~~l~~~~~~~i~~~~~~ 466 (612)
.+.++|. .+.++.+.+.+....++.-+++|+|.|.- .-++..+.++.++++-+...+.-
T Consensus 211 ~v~~i~~---~~~i~~~~~~~g~~~~~~~~v~I~GgG~ig~~lA~~L~~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~ 287 (461)
T 4g65_A 211 EVFFVAA---SNHIRSVMSELQRLEKPYRRIMIVGGGNIGASLAKRLEQTYSVKLIERNLQRAEKLSEELENTIVFCGDA 287 (461)
T ss_dssp EEEEEEE---TTTHHHHHHHTTGGGSCCCEEEEECCSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHCTTSEEEESCT
T ss_pred EEEEEec---cchHHHHHHhhccccccccEEEEEcchHHHHHHHHHhhhcCceEEEecCHHHHHHHHHHCCCceEEeccc
Confidence 3444443 35666666666555444446777777641 12456667777777545544443
Q ss_pred -ChHHHH-HHHHhcCEEEeCCCC-CCCcHHHHHHHHcCCceEEcCC--CCcccceecC
Q 007224 467 -NIPLAH-MIIAGADFILIPSRF-EPCGLIQLHAMRYGTVPIVAST--GGLVDTVEEG 519 (612)
Q Consensus 467 -~~~~~~-~~l~~adi~l~pS~~-E~~gl~~lEAma~G~PvI~s~~--gg~~e~v~~g 519 (612)
+.+.+. +=+..+|+++..... |.-=++.+-|-.+|++-+.+.. ....++++..
T Consensus 288 td~~~L~ee~i~~~D~~ia~T~~De~Ni~~~llAk~~gv~kvIa~vn~~~~~~l~~~~ 345 (461)
T 4g65_A 288 ADQELLTEENIDQVDVFIALTNEDETNIMSAMLAKRMGAKKVMVLIQRGAYVDLVQGG 345 (461)
T ss_dssp TCHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHCSS
T ss_pred cchhhHhhcCchhhcEEEEcccCcHHHHHHHHHHHHcCCccccccccccchhhhhhcc
Confidence 333332 356789999987655 6556677888899998887753 3445555443
No 151
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=41.67 E-value=20 Score=35.36 Aligned_cols=43 Identities=19% Similarity=0.060 Sum_probs=30.3
Q ss_pred HHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCCCcc
Q 007224 471 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLV 513 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~gg~~ 513 (612)
+.+++..+|++|--+..+..--.+..++..|+|+|+..+|...
T Consensus 82 l~~ll~~aDVvIDFT~p~a~~~~~~~~l~~Gv~vViGTTG~~~ 124 (288)
T 3ijp_A 82 PESAFSNTEGILDFSQPQASVLYANYAAQKSLIHIIGTTGFSK 124 (288)
T ss_dssp HHHHTTSCSEEEECSCHHHHHHHHHHHHHHTCEEEECCCCCCH
T ss_pred HHHHhcCCCEEEEcCCHHHHHHHHHHHHHcCCCEEEECCCCCH
Confidence 3457789999996655443333456788999999998877543
No 152
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=41.63 E-value=23 Score=33.82 Aligned_cols=25 Identities=32% Similarity=0.437 Sum_probs=21.4
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+.| ..++++++++|++|++++..
T Consensus 28 SG~mG---~aiA~~~~~~Ga~V~lv~~~ 52 (232)
T 2gk4_A 28 TGHLG---KIITETLLSAGYEVCLITTK 52 (232)
T ss_dssp CCHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 67777 66899999999999999865
No 153
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=41.51 E-value=1.4e+02 Score=24.10 Aligned_cols=107 Identities=11% Similarity=0.021 Sum_probs=63.8
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc-----CCce
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTVP 504 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~-----G~Pv 504 (612)
.+++|+.+.. .....++.+.. .+..+. ..-+...+...+. ..|++++-... +.-|+.+++.+.. .+|+
T Consensus 5 ~~ilivdd~~-~~~~~l~~~l~-~~~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pi 80 (133)
T 3nhm_A 5 PKVLIVENSW-TMRETLRLLLS-GEFDCT--TAADGASGLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPV 80 (133)
T ss_dssp CEEEEECSCH-HHHHHHHHHHT-TTSEEE--EESSHHHHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCE
T ss_pred CEEEEEcCCH-HHHHHHHHHHh-CCcEEE--EECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCE
Confidence 4677777644 24444544443 222222 2224444444443 35888775443 4567777777664 6777
Q ss_pred EEcCCCC---cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 505 IVASTGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|.-.... ..+....|..+++. .|.+.+++.+.|.+++..
T Consensus 81 i~~s~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~l~~ 122 (133)
T 3nhm_A 81 IFVSGYAPRTEGPADQPVPDAYLV----------KPVKPPVLIAQLHALLAR 122 (133)
T ss_dssp EEEESCCC-----TTSCCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCCcHhHHHHhhcCCceEEe----------ccCCHHHHHHHHHHHHhh
Confidence 7654322 23345567778887 999999999999999986
No 154
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=41.32 E-value=1.5e+02 Score=24.62 Aligned_cols=111 Identities=10% Similarity=0.068 Sum_probs=66.5
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH---------hcCEEEeCCCC-CCCcHHHHHHHHc-
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---------GADFILIPSRF-EPCGLIQLHAMRY- 500 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~---------~adi~l~pS~~-E~~gl~~lEAma~- 500 (612)
..+++|+.+.. .....++....+.+.......--+...+-..+. ..|++++=... +.-|+-+++.+..
T Consensus 8 ~~~ILivdd~~-~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~~~~~~~~dlillD~~lp~~~g~~l~~~l~~~ 86 (149)
T 1i3c_A 8 PKVILLVEDSK-ADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEYENSPRPNLILLDLNLPKKDGREVLAEIKQN 86 (149)
T ss_dssp CEEEEEECCCH-HHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGGTTCCCCSEEEECSCCSSSCHHHHHHHHHHC
T ss_pred CCeEEEEECCH-HHHHHHHHHHHhcCCCccEEEeCCHHHHHHHHHhccccccCCCCCEEEEeCCCCCCcHHHHHHHHHhC
Confidence 45677777644 345556665554442112122224444444554 36888875443 3357777777753
Q ss_pred ----CCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 501 ----GTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 501 ----G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.+|+|.-.... ..+.++.|..+|+. .|.+.+++.+.|++++..
T Consensus 87 ~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~~~~ 137 (149)
T 1i3c_A 87 PDLKRIPVVVLTTSHNEDDVIASYELHVNCYLT----------KSRNLKDLFKMVQGIESF 137 (149)
T ss_dssp TTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEE----------CCSSHHHHHHHHHHHHHH
T ss_pred cCcCCCeEEEEECCCChHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHHH
Confidence 56766543322 23345568889987 899999999999888653
No 155
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=41.16 E-value=1.4e+02 Score=23.95 Aligned_cols=109 Identities=14% Similarity=0.226 Sum_probs=65.5
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh--cCEEEeCCCC-CCCcHHHHHHHH---cCCceE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~--adi~l~pS~~-E~~gl~~lEAma---~G~PvI 505 (612)
+.+++++.+.+ ...+.++.+....+..+. ..-+....-..+.. .|++++-... ..-|+.+++.+. ..+|+|
T Consensus 3 ~~~ilivdd~~-~~~~~l~~~l~~~~~~v~--~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii 79 (126)
T 1dbw_A 3 DYTVHIVDDEE-PVRKSLAFMLTMNGFAVK--MHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSI 79 (126)
T ss_dssp CCEEEEEESSH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEE
T ss_pred CCEEEEEcCCH-HHHHHHHHHHHhCCcEEE--EeCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 45677777654 344555555554443232 22244444444443 5777764433 335666666664 367777
Q ss_pred EcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
...... ..+.++.|..+|+. .|.+.+++.+.+.+++..
T Consensus 80 ~~s~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~l~~~i~~~~~~ 121 (126)
T 1dbw_A 80 VITGHGDVPMAVEAMKAGAVDFIE----------KPFEDTVIIEAIERASEH 121 (126)
T ss_dssp EEECTTCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHTT
T ss_pred EEECCCCHHHHHHHHHhCHHHhee----------CCCCHHHHHHHHHHHHHh
Confidence 653322 23445568889987 899999999999988764
No 156
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=41.09 E-value=18 Score=36.23 Aligned_cols=36 Identities=28% Similarity=0.251 Sum_probs=26.7
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+.+|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 7 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 7 WQGKRVFVTGH-------TGFKG---GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp HTTCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred hCCCEEEEECC-------CchHH---HHHHHHHHhCCCeEEEEeCC
Confidence 44678776654 47777 55778899999999988754
No 157
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=41.07 E-value=28 Score=32.13 Aligned_cols=35 Identities=9% Similarity=0.083 Sum_probs=24.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHH-hCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALA-ANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~-~~Gh~V~vit~~ 127 (612)
.||.++|+.- +||+| ..+++.|+ +.||+|.+++..
T Consensus 4 mmk~vlVtGa------sg~iG---~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 4 MYXYITILGA------AGQIA---QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp SCSEEEEEST------TSHHH---HHHHHHHHHHCCCEEEEEESS
T ss_pred eEEEEEEEeC------CcHHH---HHHHHHHHhcCCceEEEEecC
Confidence 3674444421 57777 56777888 899999988754
No 158
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=40.86 E-value=30 Score=29.74 Aligned_cols=38 Identities=26% Similarity=0.338 Sum_probs=31.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+++-.+ .+|....++..++..|.+.|++|.++...
T Consensus 2 ~ki~I~y~S-----~tGnT~~~A~~ia~~l~~~g~~v~~~~~~ 39 (148)
T 3f6r_A 2 SKVLIVFGS-----STGNTESIAQKLEELIAAGGHEVTLLNAA 39 (148)
T ss_dssp CEEEEEEEC-----SSSHHHHHHHHHHHHHHTTTCEEEEEETT
T ss_pred CeEEEEEEC-----CCchHHHHHHHHHHHHHhCCCeEEEEehh
Confidence 677777543 37888999999999999999999988654
No 159
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=40.80 E-value=40 Score=29.67 Aligned_cols=41 Identities=20% Similarity=-0.039 Sum_probs=28.4
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
...||++++-.- |. .--.....-.|+..|.++||+|+|...
T Consensus 4 ~~~m~~LilLGC--PE--~Pvq~p~~lYl~~~Lk~~G~~v~VA~n 44 (157)
T 1kjn_A 4 ESTGKALMVLGC--PE--SPVQIPLAIYTSHKLKKKGFRVTVTAN 44 (157)
T ss_dssp --CCEEEEECCC--SC--STTHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred ccceeeeEEecC--CC--CcchhhHHHHHHHHHHhcCCeeEEecC
Confidence 456998877642 32 223455677788999999999999863
No 160
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=40.78 E-value=37 Score=28.12 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=30.6
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccc
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKD 133 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~ 133 (612)
+.|||++++.. +...+..+..+-++..++|.+|.+.+..+++..+
T Consensus 5 ~~mkIlL~C~a------GmSTsllv~km~~~a~~~gi~v~i~a~~~~~~~~ 49 (108)
T 3nbm_A 5 KELKVLVLCAG------SGTSAQLANAINEGANLTEVRVIANSGAYGAHYD 49 (108)
T ss_dssp CCEEEEEEESS------SSHHHHHHHHHHHHHHHHTCSEEEEEEETTSCTT
T ss_pred cCceEEEECCC------CCCHHHHHHHHHHHHHHCCCceEEEEcchHHHHh
Confidence 47999999963 3334444555666677889999998865554433
No 161
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=40.70 E-value=1.5e+02 Score=24.26 Aligned_cols=111 Identities=7% Similarity=0.004 Sum_probs=68.5
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh-------cCEEEeCCCC-CCCcHHHHHHHHc---
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG-------ADFILIPSRF-EPCGLIQLHAMRY--- 500 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~-------adi~l~pS~~-E~~gl~~lEAma~--- 500 (612)
..+++|+.+.. .....++.+....+........-+...+...+.. .|++++-... +.-|+.+++.+..
T Consensus 9 ~~~iLivdd~~-~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~ 87 (146)
T 3ilh_A 9 IDSVLLIDDDD-IVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYAAGRWPSIICIDINMPGINGWELIDLFKQHFQ 87 (146)
T ss_dssp EEEEEEECSCH-HHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHTSSCCCSEEEEESSCSSSCHHHHHHHHHHHCG
T ss_pred cceEEEEeCCH-HHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhccCCCCCEEEEcCCCCCCCHHHHHHHHHHhhh
Confidence 35677777654 3455666666555531122222245555455554 6888876544 4567777776654
Q ss_pred ----CCceEEcCCCCc----ccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 501 ----GTVPIVASTGGL----VDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 501 ----G~PvI~s~~gg~----~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.+|+|......- .+....| ..+|+. .|.+.++|.++|.+....
T Consensus 88 ~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~----------KP~~~~~L~~~i~~~~~~ 139 (146)
T 3ilh_A 88 PMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVS----------KPLTANALNNLYNKVLNE 139 (146)
T ss_dssp GGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEEC----------SSCCHHHHHHHHHHHHCC
T ss_pred hccCCCeEEEEeCCCChHHHHHHHhcCCcceeee----------CCCCHHHHHHHHHHHHHh
Confidence 667766543332 2334456 778876 999999999999998875
No 162
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=40.66 E-value=22 Score=30.85 Aligned_cols=35 Identities=14% Similarity=0.062 Sum_probs=25.6
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.+++|++++. |.+-..+++.|.+.||+|+++...
T Consensus 1 ~~~~~vlI~G~-----------G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH-----------SILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC-----------SHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC-----------CHHHHHHHHHHHHCCCCEEEEECC
Confidence 44567777741 334467888899999999999864
No 163
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=40.65 E-value=33 Score=31.57 Aligned_cols=40 Identities=20% Similarity=0.073 Sum_probs=32.4
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..|||++|..+ | .|-...++..+++.+.+.|++|.++-..
T Consensus 5 ~mmkilii~~S--~---~g~T~~la~~i~~~l~~~g~~v~~~~l~ 44 (211)
T 1ydg_A 5 APVKLAIVFYS--S---TGTGYAMAQEAAEAGRAAGAEVRLLKVR 44 (211)
T ss_dssp CCCEEEEEECC--S---SSHHHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEEEEC--C---CChHHHHHHHHHHHHhcCCCEEEEEecc
Confidence 35899999754 4 5777888888999999999999988654
No 164
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=40.42 E-value=19 Score=35.17 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=24.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..|++.|.++||+|.++...
T Consensus 1 m~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 33 (312)
T 3ko8_A 1 MRIVVTGG-------AGFIG---SHLVDKLVELGYEVVVVDNL 33 (312)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CEEEEECC-------CChHH---HHHHHHHHhCCCEEEEEeCC
Confidence 67766653 46777 56788899999999988654
No 165
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=40.26 E-value=18 Score=33.95 Aligned_cols=36 Identities=22% Similarity=0.355 Sum_probs=26.6
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCC--eEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh--~V~vit~~ 127 (612)
|.+|+|++++. +||+| ..+++.|+++|+ +|.++...
T Consensus 16 m~~~~vlVtGa-------sg~iG---~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGA-------SGETG---RVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECT-------TSHHH---HHHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEECC-------CcHHH---HHHHHHHHcCCCCCEEEEEEcC
Confidence 44577776654 47887 557788999999 99988754
No 166
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=40.15 E-value=19 Score=35.17 Aligned_cols=34 Identities=35% Similarity=0.505 Sum_probs=25.4
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|||++++. +|++| ..|++.|.++||+|.+++..
T Consensus 7 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGG-------AGFIG---GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEECC-------CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 567776653 46666 56778899999999998764
No 167
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=40.00 E-value=29 Score=31.45 Aligned_cols=39 Identities=10% Similarity=0.186 Sum_probs=29.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+.|+.. -+ .-|-.+.+..|+..|+++|++|.++-..
T Consensus 1 M~vi~v~s~-kg---G~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 1 MKVISFLNP-KG---GSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp CEEEEECCS-ST---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEeC-CC---CccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 787777653 01 2356677888999999999999999654
No 168
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=39.55 E-value=21 Score=35.18 Aligned_cols=37 Identities=24% Similarity=0.208 Sum_probs=28.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
||||+.+.. |=.+.-+..|.++|.+.| +|+|++|...
T Consensus 1 M~ILlTNDD-------Gi~ApGi~aL~~aL~~~g-~V~VVAP~~~ 37 (280)
T 1l5x_A 1 MKILVTNDD-------GVHSPGLRLLYQFALSLG-DVDVVAPESP 37 (280)
T ss_dssp CEEEEECSS-------CTTCHHHHHHHHHHGGGS-EEEEEEESSC
T ss_pred CeEEEEcCC-------CCCcHhHHHHHHHHHhCC-CEEEEecCCC
Confidence 899988865 112335778999999888 9999999754
No 169
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=39.54 E-value=28 Score=32.61 Aligned_cols=37 Identities=24% Similarity=0.125 Sum_probs=29.1
Q ss_pred CCceEEEEeccccCccccccHHHH--hhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~--~~~La~~L~~~Gh~V~vit~~ 127 (612)
.++||++.. +||.+.+ ...|.+.|.+.|++|.++...
T Consensus 4 ~~k~Illgi--------TGsiaayk~~~~ll~~L~~~g~eV~vv~T~ 42 (207)
T 3mcu_A 4 KGKRIGFGF--------TGSHCTYEEVMPHLEKLIAEGAEVRPVVSY 42 (207)
T ss_dssp TTCEEEEEE--------CSCGGGGTTSHHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEE--------EChHHHHHHHHHHHHHHHhCCCEEEEEEeh
Confidence 356887765 4666666 678999999999999999765
No 170
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=39.25 E-value=26 Score=32.99 Aligned_cols=35 Identities=23% Similarity=0.185 Sum_probs=25.1
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 6 ~~k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (241)
T 1dhr_A 6 EARRVLVYGG------RGALG---SRCVQAFRARNWWVASIDVV 40 (241)
T ss_dssp CCCEEEEETT------TSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CCCEEEEECC------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 3455666532 57777 56788899999999888654
No 171
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=39.17 E-value=25 Score=34.76 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=26.0
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+++|+|++++. +|++| ..|+..|.++||+|.++...
T Consensus 9 ~~~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGA-------NGFVA---SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECC-------ccHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 44677776653 47777 45778899999999988643
No 172
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=39.05 E-value=22 Score=35.12 Aligned_cols=35 Identities=31% Similarity=0.380 Sum_probs=25.4
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
++|||++++. +|++| ..|++.|.++||+|.++...
T Consensus 13 ~~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 13 MTRSALVTGI-------TGQDG---AYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp --CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEECC-------CChHH---HHHHHHHHHCCCeEEEEeCC
Confidence 3688877654 47777 55778899999999998754
No 173
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=38.90 E-value=1.7e+02 Score=24.37 Aligned_cols=111 Identities=17% Similarity=0.139 Sum_probs=65.6
Q ss_pred CCcEEEEEeCCchhHHHHHHHHHHHCCCc-eEEEeccChHHHHHHH--HhcCEEEeCCCC-CCCcHHHHHHHHc---CCc
Q 007224 431 ENVQIIVLGTGKKPMEKQLEQLEILYPEK-ARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMRY---GTV 503 (612)
Q Consensus 431 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~-i~~~~~~~~~~~~~~l--~~adi~l~pS~~-E~~gl~~lEAma~---G~P 503 (612)
...+++|+.+.. ...+.++++..+.+.. +... --+...+...+ ...|++++-... +.-|+.+++.+.. .+|
T Consensus 14 ~~~~iLivdd~~-~~~~~l~~~L~~~~~~~~v~~-~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ 91 (152)
T 3eul_A 14 EKVRVVVGDDHP-LFREGVVRALSLSGSVNVVGE-ADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTR 91 (152)
T ss_dssp CCEEEEEECSSH-HHHHHHHHHHHHHSSEEEEEE-ESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCE
T ss_pred ceEEEEEEcCCH-HHHHHHHHHHhhCCCeEEEEE-eCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCe
Confidence 356677777644 2444555554444421 1111 12333333333 346888775443 4456777766653 566
Q ss_pred eEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 504 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|.-.... ..+.+..|..+++. .|.+.+++.++|.+++..
T Consensus 92 ii~~s~~~~~~~~~~~~~~g~~~~l~----------Kp~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 92 VLLISAHDEPAIVYQALQQGAAGFLL----------KDSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp EEEEESCCCHHHHHHHHHTTCSEEEE----------TTCCHHHHHHHHHHHHHC
T ss_pred EEEEEccCCHHHHHHHHHcCCCEEEe----------cCCCHHHHHHHHHHHHcC
Confidence 66554322 22445568889987 999999999999999986
No 174
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=38.74 E-value=28 Score=32.50 Aligned_cols=35 Identities=14% Similarity=0.105 Sum_probs=25.2
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhC--CCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~--Gh~V~vit~~ 127 (612)
.+|+|++++. .||+| ..+++.|.++ ||+|.+++..
T Consensus 3 ~~~~ilVtGa-------sG~iG---~~l~~~l~~~~~g~~V~~~~r~ 39 (253)
T 1xq6_A 3 NLPTVLVTGA-------SGRTG---QIVYKKLKEGSDKFVAKGLVRS 39 (253)
T ss_dssp SCCEEEEEST-------TSHHH---HHHHHHHHHTTTTCEEEEEESC
T ss_pred CCCEEEEEcC-------CcHHH---HHHHHHHHhcCCCcEEEEEEcC
Confidence 3566666653 47777 5577889999 8999988754
No 175
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=38.68 E-value=21 Score=35.75 Aligned_cols=35 Identities=20% Similarity=0.212 Sum_probs=25.6
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|+|++++. +|++| ..|+..|.++||+|.++...
T Consensus 26 ~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 60 (352)
T 1sb8_A 26 QPKVWLITGV-------AGFIG---SNLLETLLKLDQKVVGLDNF 60 (352)
T ss_dssp SCCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEECC-------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 3567776653 47777 55778899999999998754
No 176
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=38.65 E-value=46 Score=27.32 Aligned_cols=46 Identities=7% Similarity=-0.105 Sum_probs=33.1
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCCcccc
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYDQYKD 133 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~~~~~ 133 (612)
|..|||+.++.. +-|.+.++..+-+.+.++|.++.+......+..+
T Consensus 1 M~mkkIll~Cg~------G~sTS~l~~k~~~~~~~~gi~~~i~a~~~~~~~~ 46 (106)
T 1e2b_A 1 MEKKHIYLFSSA------GMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGE 46 (106)
T ss_dssp CCCEEEEEECSS------STTTHHHHHHHHHHHHHSCCSEEEEEECSSSTTH
T ss_pred CCCcEEEEECCC------chhHHHHHHHHHHHHHHCCCCeEEEEecHHHHHh
Confidence 445789999864 3345566677888889999999988876554433
No 177
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=38.62 E-value=29 Score=33.21 Aligned_cols=33 Identities=21% Similarity=0.361 Sum_probs=23.9
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 8 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (267)
T 2gdz_A 8 KVALVTGA------AQGIG---RAFAEALLLKGAKVALVDWN 40 (267)
T ss_dssp CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CCcHH---HHHHHHHHHCCCEEEEEECC
Confidence 55566532 57777 55788899999999887643
No 178
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=38.38 E-value=29 Score=32.42 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=25.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 2 ~k~vlITGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGA------SRGIG---EAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESC------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777643 57777 56888999999998877654
No 179
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=38.36 E-value=35 Score=32.63 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=32.7
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
++.||.+||+..- ..-|-..++..|+.+|+++|++|..+=|
T Consensus 18 ~~m~k~i~ItgT~----t~vGKT~vs~gL~~~L~~~G~~V~~fKP 58 (242)
T 3qxc_A 18 YFQGHMLFISATN----TNAGKTTCARLLAQYCNACGVKTILLKP 58 (242)
T ss_dssp -CCCEEEEEEESS----TTSSHHHHHHHHHHHHHHTTCCEEEECC
T ss_pred hhcCcEEEEEeCC----CCCcHHHHHHHHHHHHHhCCCceEEEee
Confidence 4467999999761 2457888999999999999999998854
No 180
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=38.34 E-value=3.4e+02 Score=28.40 Aligned_cols=136 Identities=14% Similarity=0.082 Sum_probs=76.0
Q ss_pred CCcEEEEEcCcccccCHHHHHHHHHhccc----CCcEEEEEeCCchhHHHHHHHHHHH------CCCceEEEec-c----
Q 007224 402 NIPVIGFIGRLEEQKGSDILAAAIPHFIK----ENVQIIVLGTGKKPMEKQLEQLEIL------YPEKARGVAK-F---- 466 (612)
Q Consensus 402 ~~~~il~iGrl~~~Kg~d~ll~a~~~l~~----~~~~lvivG~g~~~~~~~l~~l~~~------~~~~i~~~~~-~---- 466 (612)
...+++|.|.-.. + +...+++.++-+ .++.++ .|.|+--|+...+..... .++.+.++.. +
T Consensus 144 ~~~ivVv~GSs~~--~-~~~Ye~A~eLGr~LA~~G~~LV-tGGG~GlMEaa~aGA~~a~s~qr~~GG~vIGIiP~~L~~~ 219 (460)
T 3bq9_A 144 EPNMVVCWGGHSI--N-EIEYKYTKDVGYHIGLRGLNIC-TGCGPGAMKGPMKGATIGHAKQRVEGGRYLGLTEPGIIAA 219 (460)
T ss_dssp CSCEEEEECCSSC--C-HHHHHHHHHHHHHHHHTTCEEE-ECCSSGGGTHHHHHHHHHHHHTTCSSCCEEEEECTTTTTT
T ss_pred CCCEEEEEcCCCC--C-CHHHHHHHHHHHHHHHCCCEEE-eCCcHHHhhHHHhhHHhhcccccCCCCEEEEEeChhhhhh
Confidence 3357777775432 2 223344444432 566554 455555565666555544 2444555431 1
Q ss_pred -------------C--hHHHHHHHHhcCEEEeCCCCCCCcHH--HHHHHH---------cCCceEEcC---CCCcccc--
Q 007224 467 -------------N--IPLAHMIIAGADFILIPSRFEPCGLI--QLHAMR---------YGTVPIVAS---TGGLVDT-- 515 (612)
Q Consensus 467 -------------~--~~~~~~~l~~adi~l~pS~~E~~gl~--~lEAma---------~G~PvI~s~---~gg~~e~-- 515 (612)
. .+....++..||.+|.-. -|+|+. ++|++. .++|||..+ +.|..+-
T Consensus 220 E~~N~~vtelIiv~~m~eRK~~mv~~SDAfIaLP--GG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll 297 (460)
T 3bq9_A 220 EPPNPIVNELVILPDIEKRLEAFVRCAHGIVIFP--GGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALD 297 (460)
T ss_dssp SCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECS--CSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHH
T ss_pred hhcCCCCCeEEEECCHHHHHHHHHHhCCEEEEcC--CCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHH
Confidence 0 112234778899888633 467775 788887 488999986 3443332
Q ss_pred --ee----c-CceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 516 --VE----E-GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 516 --v~----~-g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+. + ....+++ -.+|++++++.|.+.+..
T Consensus 298 ~~l~~~l~~~~~~~~ii----------v~ddpeEal~~l~~~~~~ 332 (460)
T 3bq9_A 298 EFIGATIGDEARQLYKI----------IIDDPAAVAQHMHAGMAA 332 (460)
T ss_dssp HHHHHHTCTTGGGGCEE----------EESCHHHHHHHHHHHHHH
T ss_pred HHHHHHhcchhhcCcEE----------EeCCHHHHHHHHHHHHHH
Confidence 11 1 1112221 357999999999888775
No 181
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=38.06 E-value=1.5e+02 Score=23.64 Aligned_cols=106 Identities=13% Similarity=0.087 Sum_probs=65.2
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh--cCEEEeCCCC-CCCcHHHHHHHH-----cCCceE
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMR-----YGTVPI 505 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~--adi~l~pS~~-E~~gl~~lEAma-----~G~PvI 505 (612)
+++|+.+.+ .....++.+..+.+-.+. .--+...+-+.+.. .|++++-... +.-|+.+++.+. ..+|+|
T Consensus 4 ~ILivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~al~~l~~~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii 80 (122)
T 3gl9_A 4 KVLLVDDSA-VLRKIVSFNLKKEGYEVI--EAENGQIALEKLSEFTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVI 80 (122)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHTTBCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEE
T ss_pred eEEEEeCCH-HHHHHHHHHHHHCCcEEE--EeCCHHHHHHHHHhcCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEE
Confidence 566666544 345555555555543332 22345554445543 5888875443 446778888774 357777
Q ss_pred EcCCCCc----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 506 VASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 506 ~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
.-...+- .+....|..+|+. .|.+.+++.+.|.++++
T Consensus 81 ~~s~~~~~~~~~~~~~~Ga~~~l~----------KP~~~~~L~~~i~~~l~ 121 (122)
T 3gl9_A 81 VLTAKGGEEDESLALSLGARKVMR----------KPFSPSQFIEEVKHLLN 121 (122)
T ss_dssp EEESCCSHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHC
T ss_pred EEecCCchHHHHHHHhcChhhhcc----------CCCCHHHHHHHHHHHhc
Confidence 6543222 2344567889987 99999999999998874
No 182
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=38.04 E-value=1.2e+02 Score=24.82 Aligned_cols=109 Identities=15% Similarity=0.122 Sum_probs=67.5
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHH-CCCceEEEeccChHHHHHHHHh---cCEEEeCCCCC--CCcHHHHHHHHc-----
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEIL-YPEKARGVAKFNIPLAHMIIAG---ADFILIPSRFE--PCGLIQLHAMRY----- 500 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~-~~~~i~~~~~~~~~~~~~~l~~---adi~l~pS~~E--~~gl~~lEAma~----- 500 (612)
..+++|+.+.. .....++.+..+ .+-.+. .--+...+-..+.. .|++++-.... .-|+.+++.+..
T Consensus 4 ~~~ilivdd~~-~~~~~l~~~L~~~~~~~v~--~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~ 80 (140)
T 3lua_A 4 DGTVLLIDYFE-YEREKTKIIFDNIGEYDFI--EVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTA 80 (140)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHHCCCEEE--EECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGT
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhccCccEE--EECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccC
Confidence 35677777654 345556665555 443233 22244444445544 68888765433 245666666554
Q ss_pred CCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 501 GTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 501 G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.+|+|.-.... ..+.+..|..+++. .|.+.+++.++|.+++..
T Consensus 81 ~~~ii~ls~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 127 (140)
T 3lua_A 81 NTPVIIATKSDNPGYRHAALKFKVSDYIL----------KPYPTKRLENSVRSVLKI 127 (140)
T ss_dssp TCCEEEEESCCCHHHHHHHHHSCCSEEEE----------SSCCTTHHHHHHHHHHCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHcCCCEEEE----------CCCCHHHHHHHHHHHHHh
Confidence 77887664332 22344567889987 899999999999999875
No 183
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=37.95 E-value=29 Score=32.46 Aligned_cols=36 Identities=31% Similarity=0.464 Sum_probs=25.6
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+++|+|++++. .||+| ..+++.|+++|++|.++...
T Consensus 5 ~~~~~vlVTGa-------sggiG---~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 5 FSGLRALVTGA-------GKGIG---RDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CTTCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEeCC-------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34566655543 47777 56888899999999887643
No 184
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=37.61 E-value=25 Score=34.04 Aligned_cols=38 Identities=24% Similarity=0.321 Sum_probs=28.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
.||||+.+.. |=.+.-+..|.++|.+.| +|+|++|...
T Consensus 1 ~M~ILlTNDD-------Gi~apGi~aL~~~L~~~g-~V~VVAP~~~ 38 (254)
T 2v4n_A 1 SMRILLSNDD-------GVHAPGIQTLAKALREFA-DVQVVAPDRN 38 (254)
T ss_dssp CCEEEEECSS-------CTTCHHHHHHHHHHTTTS-EEEEEEESSC
T ss_pred CCeEEEEcCC-------CCCCHHHHHHHHHHHhCC-cEEEEeeCCC
Confidence 3899988865 112335778889998876 9999999754
No 185
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=37.59 E-value=30 Score=31.44 Aligned_cols=38 Identities=18% Similarity=0.138 Sum_probs=30.9
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++|..+ .|....++..++..+.+.|++|.++-..
T Consensus 4 mmkilii~~S------~g~T~~la~~i~~~l~~~g~~v~~~~l~ 41 (199)
T 2zki_A 4 KPNILVLFYG------YGSIVELAKEIGKGAEEAGAEVKIRRVR 41 (199)
T ss_dssp CCEEEEEECC------SSHHHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CcEEEEEEeC------ccHHHHHHHHHHHHHHhCCCEEEEEehh
Confidence 4899999754 4677788888999999899999988654
No 186
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=37.57 E-value=1.4e+02 Score=24.24 Aligned_cols=108 Identities=18% Similarity=0.192 Sum_probs=63.8
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh--cCEEEeCCCC------CCCcHHHHHHHH---cC
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF------EPCGLIQLHAMR---YG 501 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~--adi~l~pS~~------E~~gl~~lEAma---~G 501 (612)
.+++|+.+.. .....+++...+.+-.+. ..-+...+...+.. .|++++-... +.-|+.+++.+. ..
T Consensus 4 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~ 80 (140)
T 2qr3_A 4 GTIIIVDDNK-GVLTAVQLLLKNHFSKVI--TLSSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRD 80 (140)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTTSSEEE--EECCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTT
T ss_pred ceEEEEeCCH-HHHHHHHHHHHhCCcEEE--EeCCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcC
Confidence 4677777654 345555555554442232 22244444444443 4777764433 335666666554 46
Q ss_pred CceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 502 TVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 502 ~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|+|.-.... ..+.+..|..+++. .|.+.+++.+.|.+++..
T Consensus 81 ~~ii~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~l~~~~~~ 126 (140)
T 2qr3_A 81 LPVVLFTAYADIDLAVRGIKEGASDFVV----------KPWDNQKLLETLLNAASQ 126 (140)
T ss_dssp CCEEEEEEGGGHHHHHHHHHTTCCEEEE----------ESCCHHHHHHHHHHHHTC
T ss_pred CCEEEEECCCCHHHHHHHHHcCchheee----------CCCCHHHHHHHHHHHHHh
Confidence 7777654222 23345567889987 899999999999999875
No 187
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=37.47 E-value=1.7e+02 Score=23.88 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=22.3
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEE
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vi 124 (612)
+.++||++|... + .....|...|.+.|++|..+
T Consensus 4 ~~~~~iLivdd~--~--------~~~~~l~~~l~~~g~~v~~~ 36 (140)
T 3grc_A 4 APRPRILICEDD--P--------DIARLLNLMLEKGGFDSDMV 36 (140)
T ss_dssp -CCSEEEEECSC--H--------HHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEcCC--H--------HHHHHHHHHHHHCCCeEEEE
Confidence 456899999764 2 24555777788889987544
No 188
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=37.06 E-value=18 Score=34.49 Aligned_cols=34 Identities=21% Similarity=0.140 Sum_probs=24.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 1 Mk~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 34 (254)
T 1zmt_A 1 MSTAIVTNV------KHFGG---MGSALRLSEAGHTVACHDES 34 (254)
T ss_dssp -CEEEESST------TSTTH---HHHHHHHHHTTCEEEECCGG
T ss_pred CeEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 677777643 57777 56888899999998877543
No 189
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=37.01 E-value=17 Score=33.71 Aligned_cols=40 Identities=10% Similarity=0.083 Sum_probs=23.6
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEE-EE
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVM-TI 124 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~-vi 124 (612)
.|.+|||+.|..+ |. .+|....+........+.|++|. ++
T Consensus 3 ~M~~mkIl~I~GS--~r--~~s~t~~la~~~~~~~~~g~~v~~~i 43 (199)
T 4hs4_A 3 TTSPLHFVTLLGS--LR--KASFNAAVARALPEIAPEGIAITPLG 43 (199)
T ss_dssp --CCEEEEEEECC--CS--TTCHHHHHHHHHHHHCCTTEEEEECC
T ss_pred CCCCCEEEEEEcC--CC--CCChHHHHHHHHHHHccCCCEEEEEE
Confidence 4678999999976 43 45655444443333335688877 44
No 190
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=36.94 E-value=26 Score=32.47 Aligned_cols=74 Identities=15% Similarity=0.153 Sum_probs=42.4
Q ss_pred HHHHhcCEEEeCCCCCCCcH--HHHHHHHcCCceEEcCCCCcc-cceecC-ceE-EEecccccccCCCCCCCHHHHHHHH
Q 007224 473 MIIAGADFILIPSRFEPCGL--IQLHAMRYGTVPIVASTGGLV-DTVEEG-FTG-FQMGSFSVDCEAVDPVDVAAVSTTV 547 (612)
Q Consensus 473 ~~l~~adi~l~pS~~E~~gl--~~lEAma~G~PvI~s~~gg~~-e~v~~g-~~G-~l~~~~~~~~~~v~~~d~~~la~~l 547 (612)
.+...||.+|+.. -++|. -+.||+..|+||++-+..|.. +.+.+- ..| |+- +-+.++ +.-.+|++++.+.|
T Consensus 114 ~m~~~sda~Ivlp--GG~GTL~E~~eal~~~kPV~lln~~g~w~~~l~~~~~~G~fi~-~~~~~~-i~~~~~~ee~~~~l 189 (195)
T 1rcu_A 114 VLLRNADVVVSIG--GEIGTAIEILGAYALGKPVILLRGTGGWTDRISQVLIDGKYLD-NRRIVE-IHQAWTVEEAVQII 189 (195)
T ss_dssp HHHTTCSEEEEES--CCHHHHHHHHHHHHTTCCEEEETTSCHHHHHGGGGCBTTTBSS-TTCCSC-EEEESSHHHHHHHH
T ss_pred HHHHhCCEEEEec--CCCcHHHHHHHHHhcCCCEEEECCCCccHHHHHHHHHcCCcCC-HHHcCe-EEEeCCHHHHHHHH
Confidence 4777899888643 24665 488999999999999754433 333210 112 210 000000 11356888888877
Q ss_pred HHH
Q 007224 548 RRA 550 (612)
Q Consensus 548 ~~l 550 (612)
.++
T Consensus 190 ~~~ 192 (195)
T 1rcu_A 190 EQI 192 (195)
T ss_dssp HTC
T ss_pred HHH
Confidence 653
No 191
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=36.79 E-value=27 Score=35.04 Aligned_cols=36 Identities=19% Similarity=0.222 Sum_probs=26.4
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHh--CCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA--NGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~--~Gh~V~vit~~ 127 (612)
+.+|+|++++. +|++| ..|+..|.+ .||+|.++...
T Consensus 8 ~~~~~vlVTGa-------tG~IG---~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILITGG-------AGFVG---SNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CTTCEEEEETT-------TSHHH---HHHHHHHHHHCTTSEEEEEECC
T ss_pred cCCCEEEEECC-------CCHHH---HHHHHHHHhhCCCCeEEEEECC
Confidence 44577766653 47777 567788999 99999998754
No 192
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=36.76 E-value=32 Score=29.50 Aligned_cols=38 Identities=21% Similarity=0.129 Sum_probs=30.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+++..+ + +|....++..++..|.+.|++|.++-..
T Consensus 1 mki~iiy~S--~---~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 1 PKALIVYGS--T---TGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp CEEEEEEEC--S---SSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred CeEEEEEEC--C---cCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 788887543 3 6888888899999999999999887543
No 193
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=36.64 E-value=27 Score=37.42 Aligned_cols=34 Identities=26% Similarity=0.554 Sum_probs=26.6
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|||++++. +|++| ..|+..|.++||+|++++..
T Consensus 147 ~m~VLVTGa-------tG~IG---~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGS-------RGLVG---RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEEST-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 688887764 46677 45788899999999998765
No 194
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=36.64 E-value=19 Score=35.87 Aligned_cols=38 Identities=18% Similarity=0.180 Sum_probs=22.9
Q ss_pred cccCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 79 IVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 79 ~~~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
+-.+.+|||++++. +|++| ..|++.|.++|+++.|++.
T Consensus 19 ~~~~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~~~v~~~ 56 (346)
T 4egb_A 19 YFQSNAMNILVTGG-------AGFIG---SNFVHYMLQSYETYKIINF 56 (346)
T ss_dssp -----CEEEEEETT-------TSHHH---HHHHHHHHHHCTTEEEEEE
T ss_pred ccccCCCeEEEECC-------ccHHH---HHHHHHHHhhCCCcEEEEE
Confidence 33455678776654 46777 5678889999966555543
No 195
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=36.59 E-value=23 Score=36.16 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=25.2
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+.|||.+|.. |-. =..++..|++.||+|.++...
T Consensus 20 m~~mkIgiIGl--------G~m---G~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGL--------GRM---GADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECC--------SHH---HHHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECc--------hHH---HHHHHHHHHhCCCEEEEEeCC
Confidence 56799999963 333 356889999999999888543
No 196
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=36.50 E-value=23 Score=34.89 Aligned_cols=34 Identities=24% Similarity=0.183 Sum_probs=25.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 4 ~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 37 (321)
T 3c1o_A 4 MEKIIIYGG-------TGYIG---KFMVRASLSFSHPTFIYARP 37 (321)
T ss_dssp CCCEEEETT-------TSTTH---HHHHHHHHHTTCCEEEEECC
T ss_pred ccEEEEEcC-------CchhH---HHHHHHHHhCCCcEEEEECC
Confidence 467776654 47777 45778899999999998765
No 197
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=36.48 E-value=24 Score=34.57 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=24.2
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
+|+|++++. +|++| ..|++.|.++||+|.++..
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r 34 (315)
T 2ydy_A 2 NRRVLVTGA-------TGLLG---RAVHKEFQQNNWHAVGCGF 34 (315)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEEC-
T ss_pred CCeEEEECC-------CcHHH---HHHHHHHHhCCCeEEEEcc
Confidence 467776654 47777 4577889999999998864
No 198
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=36.47 E-value=44 Score=32.51 Aligned_cols=44 Identities=18% Similarity=0.164 Sum_probs=33.8
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|..||-+||+..... .=|-|.....|..-|..+|++|+++=..
T Consensus 19 ~~~~~KyIfVTGGVvS---~lGKGi~aaSlg~lLk~~G~~Vt~~K~D 62 (295)
T 2vo1_A 19 YFQSMKYILVTGGVIS---GIGKGIIASSVGTILKSCGLHVTSIKID 62 (295)
T ss_dssp --CCCEEEEEEECSSS---SSSHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred ccccceEEEEcCCccc---ccccHHHHHHHHHHHHHCCCcceeeecc
Confidence 4678999999976433 3467777888999999999999998643
No 199
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=36.11 E-value=28 Score=32.46 Aligned_cols=25 Identities=32% Similarity=0.413 Sum_probs=19.6
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 14 sggiG---~~~a~~l~~~G~~V~~~~r~ 38 (234)
T 2ehd_A 14 SRGIG---EATARLLHAKGYRVGLMARD 38 (234)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 46777 56888899999999887643
No 200
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=36.00 E-value=26 Score=34.91 Aligned_cols=33 Identities=39% Similarity=0.604 Sum_probs=25.2
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+ .|.+| ..++..|++.||+|+++...
T Consensus 2 ~mkI~IiG--------aGaiG---~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 2 SLNILVIG--------TGAIG---SFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp -CEEEEES--------CCHHH---HHHHHHHHHTTCEEEEECST
T ss_pred CCEEEEEC--------cCHHH---HHHHHHHHhCCCeEEEEeCC
Confidence 48999997 36666 34667789999999999764
No 201
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=35.90 E-value=26 Score=35.72 Aligned_cols=34 Identities=26% Similarity=0.369 Sum_probs=25.9
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..|||++|+. |..| ..++..|+++||+|+++...
T Consensus 28 ~~mkI~VIGa--------G~mG---~alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGA--------GSWG---TALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECC--------SHHH---HHHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 4689999973 4344 45788899999999988654
No 202
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=35.84 E-value=26 Score=32.56 Aligned_cols=32 Identities=13% Similarity=0.171 Sum_probs=24.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++ .|.+-..++..|.++||+|+++...
T Consensus 1 M~iiIiG-----------~G~~G~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIG-----------GETTAYYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEEC-----------CHHHHHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEEC-----------CCHHHHHHHHHHHhCCCeEEEEECC
Confidence 6777774 2445577899999999999999754
No 203
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=35.53 E-value=41 Score=31.91 Aligned_cols=25 Identities=24% Similarity=0.371 Sum_probs=20.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+||+| ..++++|+++|++|++++..
T Consensus 33 Sg~iG---~aiA~~~~~~Ga~V~l~~~~ 57 (226)
T 1u7z_A 33 SGKMG---FAIAAAAARRGANVTLVSGP 57 (226)
T ss_dssp CSHHH---HHHHHHHHHTTCEEEEEECS
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEECC
Confidence 57787 67899999999999998643
No 204
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=35.53 E-value=30 Score=32.21 Aligned_cols=37 Identities=19% Similarity=0.122 Sum_probs=28.9
Q ss_pred CCceEEEEeccccCccccccHHHH--hhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDV--LGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~--~~~La~~L~~~Gh~V~vit~~ 127 (612)
+++||++-. +|+.+.+ ...|.+.|.+.|++|.++...
T Consensus 6 ~~k~I~lgi--------TGs~aa~~k~~~ll~~L~~~g~eV~vv~T~ 44 (201)
T 3lqk_A 6 AGKHVGFGL--------TGSHCTYHEVLPQMERLVELGAKVTPFVTH 44 (201)
T ss_dssp TTCEEEEEC--------CSCGGGGGGTHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEEE--------EChHHHHHHHHHHHHHHhhCCCEEEEEECh
Confidence 456777665 4666655 888999999999999999865
No 205
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=35.46 E-value=37 Score=32.27 Aligned_cols=39 Identities=23% Similarity=0.276 Sum_probs=28.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||++.|+.. -+ .-|-.+.+..|+.+|+++|++|.++=..
T Consensus 2 ~~~I~v~s~-kg---GvGKTt~a~~LA~~la~~g~~VlliD~D 40 (263)
T 1hyq_A 2 VRTITVASG-KG---GTGKTTITANLGVALAQLGHDVTIVDAD 40 (263)
T ss_dssp CEEEEEEES-SS---CSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECC-CC---CCCHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 466655542 01 2367778889999999999999998643
No 206
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=35.41 E-value=29 Score=33.96 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=25.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|||++++. +|++| ..|++.|.++||+|.+++..
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 2 SLKIAVTGG-------TGFLG---QYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 367776653 46666 56778899999999998765
No 207
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=35.40 E-value=1.7e+02 Score=23.41 Aligned_cols=109 Identities=17% Similarity=0.181 Sum_probs=63.9
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh--cCEEEeCCCC-CCCcHHHHHHHHc---CCceE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMRY---GTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~--adi~l~pS~~-E~~gl~~lEAma~---G~PvI 505 (612)
..+++|+.+.. .....++++..+.+..+. ..-+...+...+.. .|++++-... +.-|+.+++.+.. .+|+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (130)
T 3eod_A 7 GKQILIVEDEQ-VFRSLLDSWFSSLGATTV--LAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVL 83 (130)
T ss_dssp TCEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhCCceEE--EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 46788887654 345556666555553332 22345555445543 5888875543 4467777776653 56776
Q ss_pred EcCCCCc----ccceecCceEEEecccccccCCCCCC-CHHHHHHHHHHHHHh
Q 007224 506 VASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPV-DVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~-d~~~la~~l~~ll~~ 553 (612)
.-....- .+.+..|..+++. .|. +.+.+.+.+.+++..
T Consensus 84 ~~t~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~~l~~~i~~~l~~ 126 (130)
T 3eod_A 84 VISATENMADIAKALRLGVEDVLL----------KPVKDLNRLREMVFACLYP 126 (130)
T ss_dssp EEECCCCHHHHHHHHHHCCSEEEE----------SCC---CHHHHHHHHHHC-
T ss_pred EEEcCCCHHHHHHHHHcCCCEEEe----------CCCCcHHHHHHHHHHHhch
Confidence 6543222 3345568889987 888 899999999998864
No 208
>3pg5_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 3.30A {Corynebacterium diphtheriae}
Probab=35.34 E-value=27 Score=35.49 Aligned_cols=37 Identities=16% Similarity=0.238 Sum_probs=27.5
Q ss_pred ceEEEEeccccCccccc--cHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTG--GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~G--G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+-|... .| |-.+.+..||.+|+++|++|.+|=..
T Consensus 1 MkvIav~s~------KGGvGKTT~a~nLA~~LA~~G~rVLlID~D 39 (361)
T 3pg5_A 1 MRTISFFNN------KGGVGKTTLSTNVAHYFALQGKRVLYVDCD 39 (361)
T ss_dssp CEEEEBCCS------SCCHHHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEEcC------CCCCcHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 677666643 35 45566677999999999999999543
No 209
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=35.12 E-value=2e+02 Score=24.01 Aligned_cols=109 Identities=17% Similarity=0.237 Sum_probs=62.9
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCceE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~PvI 505 (612)
..+++|+.+.. .....++++..+.+-.+. .--+...+-..+. ..|++|+-... +.-|+.+++.+. ..+|+|
T Consensus 14 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii 90 (153)
T 3hv2_A 14 RPEILLVDSQE-VILQRLQQLLSPLPYTLH--FARDATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRI 90 (153)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHTTSSCEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEE
T ss_pred CceEEEECCCH-HHHHHHHHHhcccCcEEE--EECCHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEE
Confidence 45666666543 234445554444432222 1223333333333 34777765443 445666666654 467777
Q ss_pred EcCCCCc----ccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTGGL----VDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg~----~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+-....- .+.+..| ..+|+. .|.+.+++..+|.+++..
T Consensus 91 ~~s~~~~~~~~~~~~~~g~~~~~l~----------KP~~~~~l~~~i~~~l~~ 133 (153)
T 3hv2_A 91 LLTGDPDLKLIAKAINEGEIYRYLS----------KPWDDQELLLALRQALEH 133 (153)
T ss_dssp EECCCCCHHHHHHHHHTTCCSEEEC----------SSCCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHhCCCcceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 6553332 2344456 678876 899999999999999985
No 210
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=35.03 E-value=27 Score=32.72 Aligned_cols=25 Identities=28% Similarity=0.448 Sum_probs=20.1
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 12 s~gIG---~~~a~~l~~~G~~V~~~~r~ 36 (236)
T 1ooe_A 12 KGALG---SAILEFFKKNGYTVLNIDLS 36 (236)
T ss_dssp TSHHH---HHHHHHHHHTTEEEEEEESS
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEecC
Confidence 57777 56888899999999887654
No 211
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=34.82 E-value=26 Score=34.28 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=23.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++++. +|++| ..+++.|.++||+|.++..
T Consensus 1 m~vlVTGa-------tG~iG---~~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTGG-------AGFIG---SHIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEECC
T ss_pred CEEEEEeC-------CcHHH---HHHHHHHHHCCCEEEEEEC
Confidence 67766543 47777 5577889999999988754
No 212
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=34.59 E-value=34 Score=33.82 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=25.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+|++.+. +||+| ..+++.|+++||+|.++...
T Consensus 5 ~~~vlVTGa-------tG~iG---~~l~~~L~~~G~~V~~~~r~ 38 (341)
T 3enk_A 5 KGTILVTGG-------AGYIG---SHTAVELLAHGYDVVIADNL 38 (341)
T ss_dssp SCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CcEEEEecC-------CcHHH---HHHHHHHHHCCCcEEEEecC
Confidence 567765543 57777 56788899999999988654
No 213
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=34.41 E-value=43 Score=32.42 Aligned_cols=41 Identities=20% Similarity=0.362 Sum_probs=31.6
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+||++.|+.. .| .-|-......||..|++.|.+|.+|=..
T Consensus 80 ~~~kvI~vts~-kg---G~GKTt~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 80 SAVQSIVITSE-AP---GAGKSTIAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CCCCEEEEECS-ST---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECC-CC---CCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 46888888754 12 3467788889999999999999998543
No 214
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=34.38 E-value=1e+02 Score=29.41 Aligned_cols=78 Identities=13% Similarity=0.099 Sum_probs=46.8
Q ss_pred EEEEEeC-CchhHHHHHHHHHHHCC-CceEEEeccChHHHHHHHH-hcCEEEeCCCCCCCcHHHHHHHHcCCceEEcCCC
Q 007224 434 QIIVLGT-GKKPMEKQLEQLEILYP-EKARGVAKFNIPLAHMIIA-GADFILIPSRFEPCGLIQLHAMRYGTVPIVASTG 510 (612)
Q Consensus 434 ~lvivG~-g~~~~~~~l~~l~~~~~-~~i~~~~~~~~~~~~~~l~-~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~~g 510 (612)
++.|+|. |. +-+.+.+...+.+ ..+........+ +..++. .+|++|=-+..+..--.+..+...|+|+|+..+|
T Consensus 2 kV~V~Ga~G~--mG~~i~~~~~~~~~~elva~~d~~~d-l~~~~~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG 78 (245)
T 1p9l_A 2 RVGVLGAKGK--VGTTMVRAVAAADDLTLSAELDAGDP-LSLLTDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG 78 (245)
T ss_dssp EEEEETTTSH--HHHHHHHHHHHCTTCEEEEEECTTCC-THHHHHTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred EEEEECCCCH--HHHHHHHHHHhCCCCEEEEEEccCCC-HHHHhccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCC
Confidence 6788884 76 5555655555443 234444433222 223444 7999995555455444455678899999998776
Q ss_pred Cccc
Q 007224 511 GLVD 514 (612)
Q Consensus 511 g~~e 514 (612)
-..|
T Consensus 79 ~~~e 82 (245)
T 1p9l_A 79 FTAE 82 (245)
T ss_dssp CCHH
T ss_pred CCHH
Confidence 4444
No 215
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=34.24 E-value=39 Score=32.76 Aligned_cols=39 Identities=21% Similarity=0.152 Sum_probs=28.8
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+||++.|+. -+ .-|-.+.+..||.+|+++|++|.+|=..
T Consensus 1 ~MkvIavs~--KG---GvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 1 AMRQCAIYG--KG---GIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CCEEEEEEE--CT---TSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred CceEEEEeC--CC---cCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 478777752 12 3366677889999999999999988543
No 216
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=34.04 E-value=23 Score=34.43 Aligned_cols=34 Identities=24% Similarity=0.373 Sum_probs=24.9
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 35 (307)
T 2gas_A 2 ENKILILGP-------TGAIG---RHIVWASIKAGNPTYALVRK 35 (307)
T ss_dssp CCCEEEEST-------TSTTH---HHHHHHHHHHTCCEEEEECC
T ss_pred CcEEEEECC-------CchHH---HHHHHHHHhCCCcEEEEECC
Confidence 366776654 47777 45677888999999988754
No 217
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=33.42 E-value=32 Score=34.37 Aligned_cols=33 Identities=27% Similarity=0.483 Sum_probs=25.4
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|||.||+. |..| ..++..|++.||+|+++...
T Consensus 14 ~~kI~iIG~--------G~mG---~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGA--------GSWG---TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECc--------CHHH---HHHHHHHHhCCCeEEEEeCC
Confidence 689999973 4444 45778899999999988654
No 218
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=33.36 E-value=2e+02 Score=24.34 Aligned_cols=31 Identities=16% Similarity=0.092 Sum_probs=21.2
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEE
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMT 123 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~v 123 (612)
++|||++|-.+ | .....+...|.+.|++++.
T Consensus 11 k~~rILiVDD~--~--------~~r~~l~~~L~~~G~~~v~ 41 (134)
T 3to5_A 11 KNMKILIVDDF--S--------TMRRIVKNLLRDLGFNNTQ 41 (134)
T ss_dssp TTCCEEEECSC--H--------HHHHHHHHHHHHTTCCCEE
T ss_pred CCCEEEEEeCC--H--------HHHHHHHHHHHHcCCcEEE
Confidence 46899999865 2 1344566778889987543
No 219
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=33.05 E-value=33 Score=33.13 Aligned_cols=32 Identities=31% Similarity=0.411 Sum_probs=24.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++|+. |..| ..++..|++.||+|+++...
T Consensus 1 m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGC--------GALG---QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECc--------CHHH---HHHHHHHHhCCCCEEEEEcC
Confidence 78988863 4444 45788899999999998654
No 220
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=32.88 E-value=24 Score=33.87 Aligned_cols=38 Identities=18% Similarity=0.198 Sum_probs=28.2
Q ss_pred CCceEEEEeccccCccccc--cHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTG--GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~G--G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
++|||+.|... .| |-.+.+..||.+|+ +|++|.+|=..
T Consensus 25 ~~~~vI~v~s~------kGGvGKTT~a~~LA~~la-~g~~VlliD~D 64 (267)
T 3k9g_A 25 KKPKIITIASI------KGGVGKSTSAIILATLLS-KNNKVLLIDMD 64 (267)
T ss_dssp -CCEEEEECCS------SSSSCHHHHHHHHHHHHT-TTSCEEEEEEC
T ss_pred CCCeEEEEEeC------CCCchHHHHHHHHHHHHH-CCCCEEEEECC
Confidence 35777777643 34 55677788999999 99999999654
No 221
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=32.83 E-value=45 Score=32.01 Aligned_cols=42 Identities=17% Similarity=0.015 Sum_probs=30.0
Q ss_pred CCCceEEEEeccccCccccccHH-HHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~-~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+..|||++|..+ |. .+|.. ..+..++..+.+.|++|.++-..
T Consensus 32 ~~~mkIliI~GS--~r--~~s~t~~La~~~~~~l~~~g~eve~idL~ 74 (247)
T 2q62_A 32 THRPRILILYGS--LR--TVSYSRLLAEEARRLLEFFGAEVKVFDPS 74 (247)
T ss_dssp CSCCEEEEEECC--CC--SSCHHHHHHHHHHHHHHHTTCEEEECCCT
T ss_pred CCCCeEEEEEcc--CC--CCCHHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 346899999976 53 34544 55566778888889999988543
No 222
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=32.67 E-value=2e+02 Score=23.44 Aligned_cols=107 Identities=17% Similarity=0.196 Sum_probs=62.4
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCceEEc
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPIVA 507 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~PvI~s 507 (612)
+++|+.+... ....++.+....+..+. .--+...+-..+. ..|++++-... +.-|+.+++.+. ..+|+|.-
T Consensus 6 ~ILivdd~~~-~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~~ii~l 82 (137)
T 3cfy_A 6 RVLLVEDSTS-LAILYKQYVKDEPYDIF--HVETGRDAIQFIERSKPQLIILDLKLPDMSGEDVLDWINQNDIPTSVIIA 82 (137)
T ss_dssp EEEEECSCTT-HHHHHHHHTTTSSSEEE--EESSHHHHHHHHHHHCCSEEEECSBCSSSBHHHHHHHHHHTTCCCEEEEE
T ss_pred eEEEEeCCHH-HHHHHHHHHHhcCceEE--EeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEE
Confidence 5667766542 44455554443332222 2223444333333 46888875443 335666666664 35666655
Q ss_pred CCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 508 STGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 508 ~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.... ..+.+..|..+++. .|.+.+++...|.+++..
T Consensus 83 s~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~~~~ 122 (137)
T 3cfy_A 83 TAHGSVDLAVNLIQKGAEDFLE----------KPINADRLKTSVALHLKR 122 (137)
T ss_dssp ESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EecCcHHHHHHHHHCCccEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 3322 23344567889987 899999999999988864
No 223
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=32.65 E-value=2e+02 Score=23.42 Aligned_cols=109 Identities=13% Similarity=0.154 Sum_probs=64.7
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc--CCceEE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY--GTVPIV 506 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~--G~PvI~ 506 (612)
..+++|+.+.. .....++.+....+..+. .--+...+-..+. ..|++++-... +.-|+.+++.+.. .+|+|.
T Consensus 4 ~~~Ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~l~~~l~~~~~~~ii~ 80 (136)
T 2qzj_A 4 QTKILIIDGDK-DNCQKLKGFLEEKGISID--LAYNCEEAIGKIFSNKYDLIFLEIILSDGDGWTLCKKIRNVTTCPIVY 80 (136)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHTTTCEEE--EESSHHHHHHHHHHCCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEE
T ss_pred CCeEEEEcCCH-HHHHHHHHHHHHCCCEEE--EECCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHccCCCCCEEE
Confidence 35677777654 344555555544442222 2224444434443 35888764433 2356667776653 567765
Q ss_pred cCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 507 ASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-.... ..+.+..|..+++. .|.+.+++...|.+++..
T Consensus 81 ls~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~l~~~~~~ 121 (136)
T 2qzj_A 81 MTYINEDQSILNALNSGGDDYLI----------KPLNLEILYAKVKAILRR 121 (136)
T ss_dssp EESCCCHHHHHHHHHTTCCEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEcCCCHHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHHH
Confidence 53322 23345567889987 899999999999988864
No 224
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=32.65 E-value=32 Score=33.97 Aligned_cols=32 Identities=28% Similarity=0.496 Sum_probs=23.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++++. +|++| ..+++.|.++||+|.++..
T Consensus 1 m~vlVTGa-------tG~iG---~~l~~~L~~~G~~V~~~~~ 32 (338)
T 1udb_A 1 MRVLVTGG-------SGYIG---SHTCVQLLQNGHDVIILDN 32 (338)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEec
Confidence 67665543 47777 4578889999999998753
No 225
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=32.59 E-value=35 Score=32.37 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=25.0
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHh-CCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~ 127 (612)
++|.++|+.- .||+| ..+++.|++ .|++|.++...
T Consensus 3 ~~k~vlITGa------sggIG---~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 3 GIHVALVTGG------NKGIG---LAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCCEEEESSC------SSHHH---HHHHHHHHHHSSSEEEEEESS
T ss_pred CCCEEEEeCC------CcHHH---HHHHHHHHHhcCCeEEEEeCC
Confidence 4566666532 57777 567888999 99999888643
No 226
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=32.51 E-value=2e+02 Score=23.28 Aligned_cols=111 Identities=13% Similarity=0.055 Sum_probs=66.0
Q ss_pred CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCCC--CCcHHHHHHHH--cCCce
Q 007224 431 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFE--PCGLIQLHAMR--YGTVP 504 (612)
Q Consensus 431 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~E--~~gl~~lEAma--~G~Pv 504 (612)
...+++|+.+.. ...+.+++...+.+-.+... .-+.+.+...+. ..|++++-.... .-|+.+++.+. ..+|+
T Consensus 8 ~~~~iLivdd~~-~~~~~l~~~L~~~g~~v~~~-~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~i 85 (140)
T 3cg0_A 8 DLPGVLIVEDGR-LAAATLRIQLESLGYDVLGV-FDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAGCNLPI 85 (140)
T ss_dssp CCCEEEEECCBH-HHHHHHHHHHHHHTCEEEEE-ESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCE
T ss_pred CCceEEEEECCH-HHHHHHHHHHHHCCCeeEEE-ECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCE
Confidence 356777777654 34445555544444223221 223343333333 468888755442 35666666554 57888
Q ss_pred EEcCCCCc----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 505 IVASTGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|.-....- .+.+..|..+++. .|.+.+++...|.+++..
T Consensus 86 i~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~i~~~~~~ 128 (140)
T 3cg0_A 86 IFITSSQDVETFQRAKRVNPFGYLA----------KPVAADTLHRSIEMAIHK 128 (140)
T ss_dssp EEEECCCCHHHHHHHHTTCCSEEEE----------ESCCHHHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHhcCCCEEEe----------CCCCHHHHHHHHHHHHhc
Confidence 76543222 2344567788987 899999999999999875
No 227
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=32.39 E-value=34 Score=34.05 Aligned_cols=35 Identities=31% Similarity=0.500 Sum_probs=24.4
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.-..|||++|+. |..| ..++..|++.||+|+++ .+
T Consensus 16 ~~~~~kI~IiGa--------Ga~G---~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 16 YFQGMKVAIMGA--------GAVG---CYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp ----CEEEEESC--------SHHH---HHHHHHHHHTTCEEEEE-CC
T ss_pred hccCCcEEEECc--------CHHH---HHHHHHHHHCCCeEEEE-Ec
Confidence 345799999973 5555 44677799999999999 54
No 228
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=32.36 E-value=27 Score=34.57 Aligned_cols=33 Identities=33% Similarity=0.429 Sum_probs=24.1
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+. |..|. .++..|++.||+|+++...
T Consensus 2 ~mkI~IiGa--------GaiG~---~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 2 SLRIAIVGA--------GALGL---YYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp --CEEEECC--------STTHH---HHHHHHHHTSCCEEEECST
T ss_pred CCEEEEECc--------CHHHH---HHHHHHHHCCCeEEEEEcC
Confidence 389999973 55553 3577789999999999864
No 229
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=32.07 E-value=40 Score=31.63 Aligned_cols=34 Identities=32% Similarity=0.510 Sum_probs=25.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- .||+| ..++..|+++|++|.++...
T Consensus 3 ~k~vlVTGa------s~GIG---~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTGA------GSGLG---RALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEEST------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 456666643 57777 56888999999999887654
No 230
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=32.03 E-value=36 Score=34.53 Aligned_cols=34 Identities=24% Similarity=0.416 Sum_probs=25.2
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHH-hCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALA-ANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~-~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..|++.|. ++||+|.++...
T Consensus 2 ~m~vlVTGa-------tG~iG---~~l~~~L~~~~g~~V~~~~r~ 36 (397)
T 1gy8_A 2 HMRVLVCGG-------AGYIG---SHFVRALLRDTNHSVVIVDSL 36 (397)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHHCCCEEEEEECC
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHhCCCEEEEEecC
Confidence 588776653 47777 45778898 999999988654
No 231
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=31.88 E-value=35 Score=32.44 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=26.8
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 6 ~~k~vlVTGa------s~gIG---~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAG------TKGLG---KQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCC------CchhH---HHHHHHHHHCCCEEEEEcCC
Confidence 4677888643 56777 67889999999999988654
No 232
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=31.86 E-value=38 Score=32.73 Aligned_cols=37 Identities=27% Similarity=0.257 Sum_probs=24.9
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|...|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 21 m~~~k~~lVTGa------s~GIG---~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGV------SSGIG---LAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEEST------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 334567777643 57777 56888899999998877643
No 233
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=31.75 E-value=37 Score=34.40 Aligned_cols=34 Identities=24% Similarity=0.355 Sum_probs=24.7
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 29 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGA-------GGFIA---SHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEECC-------ccHHH---HHHHHHHHHCCCeEEEEECC
Confidence 466666543 47777 55778899999999988754
No 234
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=31.69 E-value=59 Score=30.43 Aligned_cols=34 Identities=15% Similarity=0.149 Sum_probs=22.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCC--eEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh--~V~vit~~ 127 (612)
|||+|+.+. .+.....+..++.+.+| +|..+...
T Consensus 2 ~rI~vl~SG---------~g~~~~~~l~~l~~~~~~~~i~~Vvs~ 37 (216)
T 2ywr_A 2 LKIGVLVSG---------RGSNLQAIIDAIESGKVNASIELVISD 37 (216)
T ss_dssp EEEEEEECS---------CCHHHHHHHHHHHTTSSCEEEEEEEES
T ss_pred CEEEEEEeC---------CcHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 689988642 22456777888888888 66555443
No 235
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=31.55 E-value=36 Score=31.19 Aligned_cols=33 Identities=36% Similarity=0.641 Sum_probs=23.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+++.. .|.+| ..++..|.+.||+|.++...
T Consensus 1 m~i~iiGa-------~G~~G---~~ia~~l~~~g~~V~~~~r~ 33 (212)
T 1jay_A 1 MRVALLGG-------TGNLG---KGLALRLATLGHEIVVGSRR 33 (212)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CeEEEEcC-------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 67777642 24444 56788899999999987643
No 236
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=31.47 E-value=37 Score=32.39 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=25.5
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 3 ~~k~vlVTGa------s~gIG---~aia~~l~~~G~~vv~~~~r 37 (258)
T 3oid_A 3 QNKCALVTGS------SRGVG---KAAAIRLAENGYNIVINYAR 37 (258)
T ss_dssp CCCEEEESSC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCCEEEEecC------CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 3466777643 57777 56788999999999987444
No 237
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=31.36 E-value=35 Score=32.41 Aligned_cols=36 Identities=33% Similarity=0.424 Sum_probs=25.5
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
....|||.+|.. |..| ..|+..|++.||+|+++...
T Consensus 16 ~~~~~kIgiIG~--------G~mG---~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 16 YFQGMKIAVLGT--------GTVG---RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp ---CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCeEEEECC--------CHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 345799999962 4444 56888999999999987644
No 238
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=31.26 E-value=35 Score=33.71 Aligned_cols=32 Identities=28% Similarity=0.304 Sum_probs=24.6
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|||++|+ .|.+|. .++..|+ .||+|+++...
T Consensus 2 ~mkI~IiG--------aGa~G~---~~a~~L~-~g~~V~~~~r~ 33 (307)
T 3ego_A 2 SLKIGIIG--------GGSVGL---LCAYYLS-LYHDVTVVTRR 33 (307)
T ss_dssp CCEEEEEC--------CSHHHH---HHHHHHH-TTSEEEEECSC
T ss_pred CCEEEEEC--------CCHHHH---HHHHHHh-cCCceEEEECC
Confidence 48999997 366664 4566688 89999999764
No 239
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=31.25 E-value=37 Score=34.24 Aligned_cols=35 Identities=34% Similarity=0.360 Sum_probs=25.9
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|+|++++. +|++| ..+++.|.++||+|.+++..
T Consensus 4 ~~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~ 38 (352)
T 1xgk_A 4 QKKTIAVVGA-------TGRQG---ASLIRVAAAVGHHVRAQVHS 38 (352)
T ss_dssp CCCCEEEEST-------TSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CCCEEEEECC-------CCHHH---HHHHHHHHhCCCEEEEEECC
Confidence 3577776654 47777 45677888999999988754
No 240
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=31.23 E-value=31 Score=34.52 Aligned_cols=36 Identities=22% Similarity=0.362 Sum_probs=24.3
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCC-CeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-h~V~vit~~ 127 (612)
+.+|+|++++. +|++| ..|++.|.++| |+|.++...
T Consensus 44 ~~~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~~V~~~~r~ 80 (357)
T 2x6t_A 44 IEGRMIIVTGG-------AGFIG---SNIVKALNDKGITDILVVDNL 80 (357)
T ss_dssp ----CEEEETT-------TSHHH---HHHHHHHHHTTCCCEEEEECC
T ss_pred CCCCEEEEECC-------CcHHH---HHHHHHHHHCCCcEEEEEecC
Confidence 45688877654 47777 55778899999 999988654
No 241
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=31.18 E-value=2.3e+02 Score=23.53 Aligned_cols=108 Identities=15% Similarity=0.198 Sum_probs=64.1
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh---cCEEEeCCCC-CCCcHHHHHHHH---cCCce
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG---ADFILIPSRF-EPCGLIQLHAMR---YGTVP 504 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~---adi~l~pS~~-E~~gl~~lEAma---~G~Pv 504 (612)
..+++|+.+... ..+.++++... +-.+. .--+...+-..+.. .|++++-... +.-|+.+++.+. ..+|+
T Consensus 4 ~~~ILivdd~~~-~~~~l~~~L~~-~~~v~--~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~i 79 (151)
T 3kcn_A 4 NERILLVDDDYS-LLNTLKRNLSF-DFEVT--TCESGPEALACIKKSDPFSVIMVDMRMPGMEGTEVIQKARLISPNSVY 79 (151)
T ss_dssp CCEEEEECSCHH-HHHHHHHHHTT-TSEEE--EESSHHHHHHHHHHSCCCSEEEEESCCSSSCHHHHHHHHHHHCSSCEE
T ss_pred CCeEEEEeCCHH-HHHHHHHHhcc-CceEE--EeCCHHHHHHHHHcCCCCCEEEEeCCCCCCcHHHHHHHHHhcCCCcEE
Confidence 356777776542 34444444432 32222 22244444444443 3888875443 456676666654 36677
Q ss_pred EEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 505 IVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|.-.... ..+.+..| ..+++. .|.+.+++.++|..++..
T Consensus 80 i~~s~~~~~~~~~~~~~~g~~~~~l~----------KP~~~~~L~~~i~~~l~~ 123 (151)
T 3kcn_A 80 LMLTGNQDLTTAMEAVNEGQVFRFLN----------KPCQMSDIKAAINAGIKQ 123 (151)
T ss_dssp EEEECGGGHHHHHHHHHHTCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHcCCeeEEEc----------CCCCHHHHHHHHHHHHHH
Confidence 6543322 23445556 678987 899999999999999986
No 242
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=31.08 E-value=42 Score=31.30 Aligned_cols=41 Identities=10% Similarity=0.050 Sum_probs=29.3
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhC-CCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~-Gh~V~vit~~ 127 (612)
++|||+.|+.. -+ .-|-.+.+..||.+|+++ |++|.++=..
T Consensus 2 ~~~~vI~v~s~-kG---GvGKTt~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 2 NAKRVFGFVSA-KG---GDGGSCIAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp -CCEEEEEEES-ST---TSSHHHHHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCCeEEEEECC-CC---CcchHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 35777777653 01 235667778899999999 9999999654
No 243
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=30.98 E-value=26 Score=33.38 Aligned_cols=33 Identities=15% Similarity=0.160 Sum_probs=25.0
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
..|||.+|+.- -+| ..|+..|.++||+|+.+..
T Consensus 5 ~~mkI~IIG~G--------~~G---~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDG--------SST---VNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCS--------CCC---SCHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeC--------HHH---HHHHHHHHHCCCEEEEecC
Confidence 36999999742 222 5689999999999988754
No 244
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=30.80 E-value=45 Score=31.57 Aligned_cols=25 Identities=24% Similarity=0.433 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 28 s~gIG---~~~a~~l~~~G~~V~~~~r~ 52 (249)
T 1o5i_A 28 SRGIG---RAVADVLSQEGAEVTICARN 52 (249)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEcCC
Confidence 57888 45788899999999887643
No 245
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=30.21 E-value=3e+02 Score=24.71 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=67.0
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCceE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~PvI 505 (612)
..+++|+.+.+ .....+..+....+-.+. .--+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 7 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~~ii 83 (233)
T 1ys7_A 7 SPRVLVVDDDS-DVLASLERGLRLSGFEVA--TAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVC 83 (233)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhCCCEEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 45777777654 344555555544443232 2224444444443 35888875443 346777777764 467877
Q ss_pred EcCCC----CcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.-... -..+.+..|..+++. .|.+.+++..+|..++..
T Consensus 84 ~lt~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 125 (233)
T 1ys7_A 84 VLSARSSVDDRVAGLEAGADDYLV----------KPFVLAELVARVKALLRR 125 (233)
T ss_dssp EEECCCTTTCCCTTTTTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEcCCCHHHHHHHHHcCCCEEEe----------CCCCHHHHHHHHHHHHhh
Confidence 65322 234455667889987 899999999999998864
No 246
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=30.17 E-value=54 Score=29.51 Aligned_cols=38 Identities=11% Similarity=0.136 Sum_probs=31.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHh-CCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~ 127 (612)
|||++|..+ | .|-...++..++..+.+ .|++|.++-..
T Consensus 2 mkilii~~S--~---~g~t~~la~~i~~~l~~~~g~~v~~~~l~ 40 (198)
T 3b6i_A 2 AKVLVLYYS--M---YGHIETMARAVAEGASKVDGAEVVVKRVP 40 (198)
T ss_dssp CEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTCEEEEEECC
T ss_pred CeEEEEEeC--C---CcHHHHHHHHHHHHHhhcCCCEEEEEEcc
Confidence 799999765 4 57788888889999988 89999988654
No 247
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=30.16 E-value=36 Score=33.55 Aligned_cols=32 Identities=6% Similarity=0.050 Sum_probs=26.2
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|||++++. | ....+++++.++||+|.++.+.
T Consensus 2 ~m~Ililg~---------g---~~~~l~~a~~~~G~~v~~~~~~ 33 (334)
T 2r85_A 2 KVRIATYAS---------H---SALQILKGAKDEGFETIAFGSS 33 (334)
T ss_dssp CSEEEEESS---------T---THHHHHHHHHHTTCCEEEESCG
T ss_pred ceEEEEECC---------h---hHHHHHHHHHhCCCEEEEEECC
Confidence 589999863 3 4567899999999999999876
No 248
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=30.08 E-value=39 Score=33.45 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=24.7
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+|++++. +|++| ..|++.|.++||+|.++...
T Consensus 2 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 35 (348)
T 1ek6_A 2 AEKVLVTGG-------AGYIG---SHTVLELLEAGYLPVVIDNF 35 (348)
T ss_dssp CSEEEEETT-------TSHHH---HHHHHHHHHTTCCEEEEECS
T ss_pred CCEEEEECC-------CCHHH---HHHHHHHHHCCCEEEEEecC
Confidence 467766543 47777 55778899999999998643
No 249
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=30.00 E-value=49 Score=30.15 Aligned_cols=40 Identities=13% Similarity=0.061 Sum_probs=29.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHH-HHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPA-LAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~-L~~~Gh~V~vit~~ 127 (612)
|||++|..+ |. +.|-...++..++.. |.+.|++|.++-..
T Consensus 3 mkilii~gS--~r-~~g~t~~la~~i~~~~l~~~g~~v~~~dl~ 43 (197)
T 2vzf_A 3 YSIVAISGS--PS-RNSTTAKLAEYALAHVLARSDSQGRHIHVI 43 (197)
T ss_dssp EEEEEEECC--SS-TTCHHHHHHHHHHHHHHHHSSEEEEEEEGG
T ss_pred ceEEEEECC--CC-CCChHHHHHHHHHHHHHHHCCCeEEEEEcc
Confidence 799999865 43 345566677778888 88889999888643
No 250
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=29.99 E-value=19 Score=34.78 Aligned_cols=32 Identities=19% Similarity=0.358 Sum_probs=24.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++++. +|++| ..+++.|.++||+|++++.
T Consensus 6 m~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITGA-------NGQLG---KQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp EEEEEEST-------TSHHH---HHHHHHSCTTTEEEEEECT
T ss_pred eEEEEECC-------CCHHH---HHHHHHHHhCCCEEEEecc
Confidence 67776654 46777 4577889999999999864
No 251
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=29.82 E-value=40 Score=31.90 Aligned_cols=25 Identities=32% Similarity=0.415 Sum_probs=20.2
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 23 sggiG---~~~a~~l~~~G~~V~~~~r~ 47 (265)
T 1h5q_A 23 NRGIG---LAFTRAVAAAGANVAVIYRS 47 (265)
T ss_dssp TSHHH---HHHHHHHHHTTEEEEEEESS
T ss_pred CchHH---HHHHHHHHHCCCeEEEEeCc
Confidence 57777 56888899999999888753
No 252
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=29.75 E-value=35 Score=31.86 Aligned_cols=33 Identities=15% Similarity=0.283 Sum_probs=23.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
||.++|+.- .||+| ..+++.|+++|++|.++..
T Consensus 1 ~k~vlITGa------sggiG---~~~a~~l~~~G~~v~~~~~ 33 (245)
T 2ph3_A 1 MRKALITGA------SRGIG---RAIALRLAEDGFALAIHYG 33 (245)
T ss_dssp CCEEEETTT------TSHHH---HHHHHHHHTTTCEEEEEES
T ss_pred CCEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEcC
Confidence 455556532 46777 5688889999999998843
No 253
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=29.74 E-value=3.3e+02 Score=25.01 Aligned_cols=109 Identities=12% Similarity=0.101 Sum_probs=65.6
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc---CCceE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~---G~PvI 505 (612)
..+++|+.+.. .....++.+....+-.+. .--+...+-..+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 23 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii 99 (250)
T 3r0j_A 23 EARVLVVDDEA-NIVELLSVSLKFQGFEVY--TATNGAQALDRARETRPDAVILDVXMPGMDGFGVLRRLRADGIDAPAL 99 (250)
T ss_dssp SCEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEE
T ss_pred CceEEEEECCH-HHHHHHHHHHHHCCCEEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 46777777654 244445554444442232 2224444433443 46888775433 4467777776653 56777
Q ss_pred EcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.-.... ..+.+..|..+|+. .|.+.+++...|..++..
T Consensus 100 ~lt~~~~~~~~~~~~~~Ga~~yl~----------Kp~~~~~L~~~i~~~~~~ 141 (250)
T 3r0j_A 100 FLTARDSLQDKIAGLTLGGDDYVT----------KPFSLEEVVARLRVILRR 141 (250)
T ss_dssp EEECSTTHHHHHHHHTSTTCEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEECCCCHHHHHHHHHcCCcEEEe----------CCCCHHHHHHHHHHHHHh
Confidence 654322 22345568889987 999999999999999863
No 254
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=29.43 E-value=2.4e+02 Score=23.36 Aligned_cols=110 Identities=17% Similarity=0.204 Sum_probs=65.7
Q ss_pred CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCce
Q 007224 431 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVP 504 (612)
Q Consensus 431 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~Pv 504 (612)
...+++|+.+.. .....++......+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+. ..+|+
T Consensus 6 ~~~~iLivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 82 (154)
T 2rjn_A 6 KNYTVMLVDDEQ-PILNSLKRLIKRLGCNII--TFTSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIER 82 (154)
T ss_dssp SCCEEEEECSCH-HHHHHHHHHHHTTTCEEE--EESCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEE
T ss_pred CCCeEEEEcCCH-HHHHHHHHHHHHcCCeEE--EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcE
Confidence 356777777654 344555555554443232 2224444444444 35888875443 345666666654 36777
Q ss_pred EEcCCCC----cccceecC-ceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 505 IVASTGG----LVDTVEEG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~gg----~~e~v~~g-~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|.-.... ..+.+..| ..+++. .|.+.+++...|.+++..
T Consensus 83 i~ls~~~~~~~~~~~~~~g~~~~~l~----------kP~~~~~L~~~i~~~~~~ 126 (154)
T 2rjn_A 83 VVISGYADAQATIDAVNRGKISRFLL----------KPWEDEDVFKVVEKGLQL 126 (154)
T ss_dssp EEEECGGGHHHHHHHHHTTCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEecCCCHHHHHHHHhccchheeee----------CCCCHHHHHHHHHHHHHH
Confidence 6654322 22333445 678887 899999999999999875
No 255
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=29.40 E-value=25 Score=34.45 Aligned_cols=33 Identities=18% Similarity=0.348 Sum_probs=25.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+ .|..|. .++..|++.||+|+++...
T Consensus 2 ~mkI~iiG--------aGa~G~---~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 2 SLSVAIIG--------PGAVGT---TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp -CCEEEEC--------CSHHHH---HHHHHHHHHCTTCEEEESS
T ss_pred CcEEEEEC--------CCHHHH---HHHHHHHHCCCeEEEEEec
Confidence 48999997 366664 4667788899999999765
No 256
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=29.37 E-value=36 Score=33.71 Aligned_cols=25 Identities=16% Similarity=0.181 Sum_probs=18.7
Q ss_pred cccHHHHhhhhHHHHHhC--CCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~--Gh~V~vit~~ 127 (612)
+|++| ..|+..|.++ ||+|.++...
T Consensus 13 tG~iG---~~l~~~L~~~~~g~~V~~~~r~ 39 (348)
T 1oc2_A 13 AGFIG---SNFVHYVYNNHPDVHVTVLDKL 39 (348)
T ss_dssp TSHHH---HHHHHHHHHHCTTCEEEEEECC
T ss_pred ccHHH---HHHHHHHHHhCCCCEEEEEeCC
Confidence 47777 4567778888 8999988653
No 257
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=29.28 E-value=44 Score=32.59 Aligned_cols=25 Identities=20% Similarity=0.213 Sum_probs=19.6
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|++| ..|++.|.++||+|.++...
T Consensus 21 tG~iG---~~l~~~L~~~G~~V~~~~r~ 45 (321)
T 2pk3_A 21 AGFVG---KYLANHLTEQNVEVFGTSRN 45 (321)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEecC
Confidence 47777 55778899999999998654
No 258
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=29.28 E-value=96 Score=28.89 Aligned_cols=37 Identities=16% Similarity=0.174 Sum_probs=23.0
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCC--CeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G--h~V~vit~~ 127 (612)
|.++||+++.+ |.+.-+..|..++.+.+ ++|..+...
T Consensus 5 m~~~ri~vl~S---------G~gsnl~all~~~~~~~l~~~I~~Visn 43 (209)
T 4ds3_A 5 MKRNRVVIFIS---------GGGSNMEALIRAAQAPGFPAEIVAVFSD 43 (209)
T ss_dssp -CCEEEEEEES---------SCCHHHHHHHHHHTSTTCSEEEEEEEES
T ss_pred CCCccEEEEEE---------CCcHHHHHHHHHHHcCCCCcEEEEEEEC
Confidence 56789988763 23445667777776543 577666654
No 259
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=29.24 E-value=46 Score=31.36 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=25.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 4 ~k~~lVTGa------s~gIG---~~ia~~l~~~G~~V~~~~~~ 37 (246)
T 3osu_A 4 TKSALVTGA------SRGIG---RSIALQLAEEGYNVAVNYAG 37 (246)
T ss_dssp SCEEEETTC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 366677643 57777 56888999999999887654
No 260
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=29.18 E-value=45 Score=32.90 Aligned_cols=34 Identities=26% Similarity=0.157 Sum_probs=24.0
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+|++.+. .|++| ..|++.|.++||+|.++...
T Consensus 9 ~~~vlVTGa-------tGfIG---~~l~~~Ll~~G~~V~~~~r~ 42 (338)
T 2rh8_A 9 KKTACVVGG-------TGFVA---SLLVKLLLQKGYAVNTTVRD 42 (338)
T ss_dssp CCEEEEECT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC-------chHHH---HHHHHHHHHCCCEEEEEEcC
Confidence 466665543 46777 45778899999999876643
No 261
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=29.18 E-value=43 Score=31.10 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=23.9
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++|+ .|.+| ..++..|++.||+|.++...
T Consensus 28 ~~~I~iiG--------~G~~G---~~la~~l~~~g~~V~~~~r~ 60 (215)
T 2vns_A 28 APKVGILG--------SGDFA---RSLATRLVGSGFKVVVGSRN 60 (215)
T ss_dssp -CCEEEEC--------CSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred CCEEEEEc--------cCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 58999986 24444 45778899999999887543
No 262
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=29.11 E-value=59 Score=28.14 Aligned_cols=34 Identities=24% Similarity=0.425 Sum_probs=25.3
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|+|++++. |.+| ..++..|.+.|++|+++...
T Consensus 18 ~~~~v~IiG~--------G~iG---~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 18 KSKYIVIFGC--------GRLG---SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCcEEEECC--------CHHH---HHHHHHHHhCCCeEEEEECC
Confidence 4689998862 4444 45777899999999998765
No 263
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=29.07 E-value=2.5e+02 Score=23.33 Aligned_cols=109 Identities=16% Similarity=0.168 Sum_probs=64.8
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCceE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~PvI 505 (612)
..+++|+.+.. .....+.+.....+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 3 ~~~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii 79 (155)
T 1qkk_A 3 APSVFLIDDDR-DLRKAMQQTLELAGFTVS--SFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMI 79 (155)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEE
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHHcCcEEE--EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEE
Confidence 34677777654 344555555555443232 2223444333332 35888775443 345666666654 367777
Q ss_pred EcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+..... ..+.+..|..+++. .|.+.+++...|.+++..
T Consensus 80 ~ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 80 LVTGHGDIPMAVQAIQDGAYDFIA----------KPFAADRLVQSARRAEEK 121 (155)
T ss_dssp EEECGGGHHHHHHHHHTTCCEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEECCCChHHHHHHHhcCCCeEEe----------CCCCHHHHHHHHHHHHHH
Confidence 654322 23345567889987 899999999999999875
No 264
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=28.88 E-value=58 Score=31.83 Aligned_cols=40 Identities=23% Similarity=0.245 Sum_probs=29.8
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.+|||+.|+ . -+ .-|-.+.+..||.+|+++|++|.+|=..
T Consensus 39 ~~~~vI~v~-~-KG---GvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 39 TGAKVFAVY-G-KG---GIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp -CCEEEEEE-C-ST---TSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CCceEEEEE-C-CC---CccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 357777776 3 12 3466678888999999999999999654
No 265
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=28.88 E-value=39 Score=34.18 Aligned_cols=35 Identities=26% Similarity=0.392 Sum_probs=25.7
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCC-CeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-h~V~vit~~ 127 (612)
.+|+|++++. +|++| ..|++.|.++| |+|.++...
T Consensus 31 ~~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~~V~~~~r~ 66 (377)
T 2q1s_A 31 ANTNVMVVGG-------AGFVG---SNLVKRLLELGVNQVHVVDNL 66 (377)
T ss_dssp TTCEEEEETT-------TSHHH---HHHHHHHHHTTCSEEEEECCC
T ss_pred CCCEEEEECC-------ccHHH---HHHHHHHHHcCCceEEEEECC
Confidence 3577776653 46777 55778899999 999998754
No 266
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=28.86 E-value=37 Score=32.35 Aligned_cols=24 Identities=25% Similarity=0.393 Sum_probs=19.3
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++|++|.++..
T Consensus 30 sggiG---~~la~~l~~~G~~v~~~~r 53 (274)
T 1ja9_A 30 GRGIG---RGIAIELGRRGASVVVNYG 53 (274)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcC
Confidence 47777 5678889999999988765
No 267
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=28.75 E-value=48 Score=31.87 Aligned_cols=34 Identities=24% Similarity=0.558 Sum_probs=25.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 4 ~k~~lVTGa------s~GIG---~aia~~la~~G~~V~~~~r~ 37 (264)
T 3tfo_A 4 DKVILITGA------SGGIG---EGIARELGVAGAKILLGARR 37 (264)
T ss_dssp TCEEEESST------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCC------ccHHH---HHHHHHHHHCCCEEEEEECC
Confidence 466677643 57777 56888999999999887643
No 268
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=28.74 E-value=41 Score=33.24 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=25.3
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..|||.+|+. |-.| ..++..|++.||+|+++-..
T Consensus 20 ~m~~I~iIG~--------G~mG---~~~A~~l~~~G~~V~~~dr~ 53 (310)
T 3doj_A 20 HMMEVGFLGL--------GIMG---KAMSMNLLKNGFKVTVWNRT 53 (310)
T ss_dssp CSCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred cCCEEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 3589999963 3333 56888999999999987543
No 269
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=28.58 E-value=2.2e+02 Score=22.67 Aligned_cols=109 Identities=17% Similarity=0.170 Sum_probs=64.3
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc-----CCc
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~-----G~P 503 (612)
..+++|+.+.. .....++++..+.+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+.. ..|
T Consensus 6 ~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~~ 82 (132)
T 3lte_A 6 SKRILVVDDDQ-AMAAAIERVLKRDHWQVE--IAHNGFDAGIKLSTFEPAIMTLDLSMPKLDGLDVIRSLRQNKVANQPK 82 (132)
T ss_dssp -CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHTCCSEEEEESCBTTBCHHHHHHHHHTTTCSSCCE
T ss_pred CccEEEEECCH-HHHHHHHHHHHHCCcEEE--EeCCHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhcCccCCCe
Confidence 45677777644 345555555555443232 2224444433443 45777775544 4467778887763 344
Q ss_pred eEEcCCCC---cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 504 PIVASTGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|.+.... ..+.+..|..+++. .|.+.+++.+.|.+....
T Consensus 83 ii~~~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 125 (132)
T 3lte_A 83 ILVVSGLDKAKLQQAVTEGADDYLE----------KPFDNDALLDRIHDLVNE 125 (132)
T ss_dssp EEEECCSCSHHHHHHHHHTCCEEEC----------SSCCHHHHHHHHHHHHC-
T ss_pred EEEEeCCChHHHHHHHHhChHHHhh----------CCCCHHHHHHHHHHHcCC
Confidence 55544322 22345568888987 999999999999988864
No 270
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=28.35 E-value=59 Score=31.49 Aligned_cols=36 Identities=22% Similarity=0.364 Sum_probs=25.0
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+.+++|++++. .||+| ..++..|+++|++|.++...
T Consensus 24 l~~k~vlITGa-------sggiG---~~la~~L~~~G~~V~~~~r~ 59 (302)
T 1w6u_A 24 FQGKVAFITGG-------GTGLG---KGMTTLLSSLGAQCVIASRK 59 (302)
T ss_dssp TTTCEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCCCEEEEECC-------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 34455554433 57777 56888899999999887644
No 271
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=28.28 E-value=2.9e+02 Score=23.93 Aligned_cols=109 Identities=13% Similarity=0.169 Sum_probs=67.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh--cCEEEeCCCC-CCCcHHHHHHHH---cCCceE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~--adi~l~pS~~-E~~gl~~lEAma---~G~PvI 505 (612)
..+++|+.+.+ .....++.+..+.+-.+ ..--+...+-..+.. .|++++-... +.-|+-+++.+. ..+|+|
T Consensus 7 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v--~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii 83 (184)
T 3rqi_A 7 DKNFLVIDDNE-VFAGTLARGLERRGYAV--RQAHNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARIL 83 (184)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHHHTTCEE--EEECSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEEE
T ss_pred CCeEEEEcCCH-HHHHHHHHHHHHCCCEE--EEeCCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCEE
Confidence 45677777654 34555655555554322 222345554445543 5888764433 345777776664 367777
Q ss_pred EcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.-.... ..+.+..|..+|+. .|.+.+++..+|.+++..
T Consensus 84 ~lt~~~~~~~~~~a~~~Ga~~~l~----------KP~~~~~L~~~i~~~~~~ 125 (184)
T 3rqi_A 84 VLTGYASIATAVQAVKDGADNYLA----------KPANVESILAALQTNASE 125 (184)
T ss_dssp EEESSCCHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHTSTTHHH
T ss_pred EEeCCCCHHHHHHHHHhCHHHhee----------CCCCHHHHHHHHHHHHHH
Confidence 654322 23445668889987 999999999999988865
No 272
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=28.26 E-value=39 Score=33.24 Aligned_cols=32 Identities=19% Similarity=0.271 Sum_probs=24.6
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.|||.+|.. |-.| ..++..|++.||+|+++..
T Consensus 7 ~~~I~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 7 DFHVGIVGL--------GSMG---MGAARSCLRAGLSTWGADL 38 (303)
T ss_dssp CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECC--------CHHH---HHHHHHHHHCCCeEEEEEC
Confidence 589999963 4344 5588889999999998854
No 273
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=28.22 E-value=64 Score=31.72 Aligned_cols=41 Identities=24% Similarity=0.334 Sum_probs=31.7
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.++|++.|+.. .| .-|-.+....||..|++.|.+|.+|-..
T Consensus 102 ~~~kvI~vts~-kg---G~GKTtva~nLA~~lA~~G~rVLLID~D 142 (299)
T 3cio_A 102 TENNILMITGA-TP---DSGKTFVSSTLAAVIAQSDQKVLFIDAD 142 (299)
T ss_dssp CSCCEEEEEES-SS---SSCHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCeEEEEECC-CC---CCChHHHHHHHHHHHHhCCCcEEEEECC
Confidence 46788888754 12 3477788899999999999999999654
No 274
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=28.20 E-value=36 Score=30.92 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=25.2
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCC--eEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH--RVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh--~V~vit~~ 127 (612)
+|||++++. +|++| ..+++.|.++|+ +|.+++..
T Consensus 5 ~~~vlVtGa-------tG~iG---~~l~~~l~~~g~~~~V~~~~r~ 40 (215)
T 2a35_A 5 PKRVLLAGA-------TGLTG---EHLLDRILSEPTLAKVIAPARK 40 (215)
T ss_dssp CCEEEEECT-------TSHHH---HHHHHHHHHCTTCCEEECCBSS
T ss_pred CceEEEECC-------CcHHH---HHHHHHHHhCCCCCeEEEEeCC
Confidence 578877654 47777 557788999999 88887654
No 275
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=28.08 E-value=1.5e+02 Score=27.48 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=21.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhC--CCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~--Gh~V~vit~~ 127 (612)
|||+++.+. +| ..+..|..++.+. +|+|..+...
T Consensus 1 ~ri~vl~Sg-------~g--snl~ali~~~~~~~~~~~i~~Vis~ 36 (212)
T 1jkx_A 1 MNIVVLISG-------NG--SNLQAIIDACKTNKIKGTVRAVFSN 36 (212)
T ss_dssp CEEEEEESS-------CC--HHHHHHHHHHHTTSSSSEEEEEEES
T ss_pred CEEEEEEEC-------Cc--HHHHHHHHHHHcCCCCceEEEEEeC
Confidence 688888642 22 3466677776655 5788666654
No 276
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=28.07 E-value=49 Score=33.09 Aligned_cols=35 Identities=26% Similarity=0.420 Sum_probs=23.2
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|++|||+|+++ |. ......++|.++||+|..+...
T Consensus 5 ~~~mrivf~Gt---~~--------fa~~~L~~L~~~~~~v~~Vvt~ 39 (318)
T 3q0i_A 5 SQSLRIVFAGT---PD--------FAARHLAALLSSEHEIIAVYTQ 39 (318)
T ss_dssp --CCEEEEECC---SH--------HHHHHHHHHHTSSSEEEEEECC
T ss_pred ccCCEEEEEec---CH--------HHHHHHHHHHHCCCcEEEEEcC
Confidence 56899999985 21 2223447778889999877665
No 277
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=28.03 E-value=2.5e+02 Score=23.08 Aligned_cols=109 Identities=17% Similarity=0.112 Sum_probs=63.5
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH-------cC
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-------YG 501 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma-------~G 501 (612)
..+++|+.+.. .....++++..+.+..+.. --+.+.+-..+. ..|++++=... +.-|+.+++.+. ..
T Consensus 14 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~~--~~~~~~al~~~~~~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~ 90 (143)
T 3m6m_D 14 SMRMLVADDHE-ANRMVLQRLLEKAGHKVLC--VNGAEQVLDAMAEEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRY 90 (143)
T ss_dssp -CEEEEECSSH-HHHHHHHHHHHC--CEEEE--ESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCC
T ss_pred cceEEEEeCCH-HHHHHHHHHHHHcCCeEEE--eCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCC
Confidence 46777777654 3455555555544432322 223444434443 35888875443 445777777764 13
Q ss_pred CceEEcCCCCcc----cceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 502 TVPIVASTGGLV----DTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 502 ~PvI~s~~gg~~----e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|+|+.....-. +....|..+|+. .|.+.+++.++|.++...
T Consensus 91 ~pii~~s~~~~~~~~~~~~~~Ga~~~l~----------KP~~~~~L~~~l~~~~~~ 136 (143)
T 3m6m_D 91 TPVVVLSADVTPEAIRACEQAGARAFLA----------KPVVAAKLLDTLADLAVS 136 (143)
T ss_dssp CCEEEEESCCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHC--
T ss_pred CeEEEEeCCCCHHHHHHHHHcChhheee----------CCCCHHHHHHHHHHHHHh
Confidence 677765443322 334457889987 999999999999988754
No 278
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=27.69 E-value=53 Score=31.44 Aligned_cols=33 Identities=27% Similarity=0.435 Sum_probs=24.4
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 22 k~~lVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 54 (267)
T 1vl8_A 22 RVALVTGG------SRGLG---FGIAQGLAEAGCSVVVASRN 54 (267)
T ss_dssp CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 56666532 57777 56888899999999887643
No 279
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=27.59 E-value=52 Score=26.39 Aligned_cols=33 Identities=24% Similarity=0.318 Sum_probs=23.4
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCC-CeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-h~V~vit~~ 127 (612)
+|||++++ .|++| ..++..|.++| ++|.++...
T Consensus 5 ~~~v~I~G--------~G~iG---~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVG--------AGKIG---QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEEC--------CSHHH---HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEEC--------CCHHH---HHHHHHHHhCCCceEEEEeCC
Confidence 46777774 25555 45778899999 998887654
No 280
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=27.46 E-value=49 Score=30.28 Aligned_cols=39 Identities=10% Similarity=0.060 Sum_probs=31.0
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||+++-.+ .+|....+...|+..|.+.|++|.++...
T Consensus 21 ~~kv~IvY~S-----~tGnTe~~A~~ia~~l~~~g~~v~v~~l~ 59 (191)
T 1bvy_F 21 NTPLLVLYGS-----NMGTAEGTARDLADIAMSKGFAPQVATLD 59 (191)
T ss_dssp CCCEEEEEEC-----SSSHHHHHHHHHHHHHHTTTCCCEEEEGG
T ss_pred CCeEEEEEEC-----CChHHHHHHHHHHHHHHhCCCceEEeeHH
Confidence 5677666432 37999999999999999999999887654
No 281
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=27.38 E-value=51 Score=29.46 Aligned_cols=37 Identities=14% Similarity=0.255 Sum_probs=25.4
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|.+|||++-+.. +|.. .=..|...|.++||+|.=+.+
T Consensus 1 m~~MkIaigsDh-------aG~~-lK~~i~~~L~~~G~eV~D~G~ 37 (162)
T 2vvp_A 1 MSGMRVYLGADH-------AGYE-LKQRIIEHLKQTGHEPIDCGA 37 (162)
T ss_dssp --CCEEEEEECH-------HHHH-HHHHHHHHHHHTTCEEEECSC
T ss_pred CCCCEEEEEeCc-------hhHH-HHHHHHHHHHHCCCEEEEeCC
Confidence 446998877653 4555 344578889999999987754
No 282
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=27.35 E-value=40 Score=32.44 Aligned_cols=33 Identities=27% Similarity=0.357 Sum_probs=24.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhC-CCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~-Gh~V~vit~~ 127 (612)
|||++++. +|++|. .+++.|.+. |++|.+++..
T Consensus 1 M~ilVtGa-------tG~iG~---~l~~~L~~~~g~~V~~~~R~ 34 (289)
T 3e48_A 1 MNIMLTGA-------TGHLGT---HITNQAIANHIDHFHIGVRN 34 (289)
T ss_dssp CCEEEETT-------TSHHHH---HHHHHHHHTTCTTEEEEESS
T ss_pred CEEEEEcC-------CchHHH---HHHHHHhhCCCCcEEEEECC
Confidence 78877764 477775 455668887 9999999865
No 283
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=27.20 E-value=75 Score=30.28 Aligned_cols=42 Identities=19% Similarity=0.115 Sum_probs=27.8
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
|.+++|++|++- |.+ ..-..+.....++++|++|.+++...+
T Consensus 1 ~~~~~vL~v~aH--PDD----e~l~~Ggtia~~~~~G~~V~vv~lT~G 42 (242)
T 2ixd_A 1 MSGLHILAFGAH--ADD----VEIGMAGTIAKYTKQGYEVGICDLTEA 42 (242)
T ss_dssp -CCCSEEEEESS--TTH----HHHHHHHHHHHHHHTTCCEEEEEEECC
T ss_pred CCCccEEEEEeC--CCh----HHHhHHHHHHHHHHCCCeEEEEEEcCC
Confidence 457899999974 642 222233444566789999999987644
No 284
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=27.14 E-value=1.4e+02 Score=27.89 Aligned_cols=36 Identities=17% Similarity=0.184 Sum_probs=22.9
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHh-CCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~ 127 (612)
.+|||+++.+ |-|.-+..|..+..+ .+++|..+...
T Consensus 4 ~~~riavl~S---------G~Gsnl~all~~~~~~~~~eI~~Vis~ 40 (215)
T 3tqr_A 4 EPLPIVVLIS---------GNGTNLQAIIGAIQKGLAIEIRAVISN 40 (215)
T ss_dssp CCEEEEEEES---------SCCHHHHHHHHHHHTTCSEEEEEEEES
T ss_pred CCcEEEEEEe---------CCcHHHHHHHHHHHcCCCCEEEEEEeC
Confidence 3689988763 234456667666655 35788766654
No 285
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=27.10 E-value=57 Score=31.00 Aligned_cols=38 Identities=16% Similarity=0.166 Sum_probs=27.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+.|+.. + .-|-.+.+..||.+|+++|++|.+|=..
T Consensus 1 M~vI~vs~K--G---GvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 1 MRQVAIYGK--G---GIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp CEEEEEEEC--T---TSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CcEEEEecC--C---CCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 677666521 1 2356677888999999999999998543
No 286
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=27.04 E-value=66 Score=31.11 Aligned_cols=25 Identities=28% Similarity=0.381 Sum_probs=20.4
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 25 s~gIG---~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 25 NSGLG---AVTARELARRGATVIMAVRD 49 (291)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 57888 56888999999999888654
No 287
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=26.89 E-value=48 Score=31.86 Aligned_cols=34 Identities=26% Similarity=0.442 Sum_probs=25.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 5 ~k~vlVTGa------s~gIG---~~~a~~l~~~G~~V~~~~r~ 38 (281)
T 3m1a_A 5 AKVWLVTGA------SSGFG---RAIAEAAVAAGDTVIGTARR 38 (281)
T ss_dssp CCEEEETTT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcEEEEECC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 566777643 57777 56888899999999887654
No 288
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=26.88 E-value=4.3e+02 Score=25.35 Aligned_cols=118 Identities=12% Similarity=0.103 Sum_probs=70.8
Q ss_pred CcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc--ChHHHHHHHHhc
Q 007224 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~il~iGrl~--~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~--~~~~~~~~l~~a 478 (612)
.|+++ .+-+. .+.|++.+++.+.+. .+.-+++.+-+.+....+.+..++++......+.- +.+.+..+.+.+
T Consensus 96 ~Pivl-m~Y~npv~~~g~e~f~~~~~~a---Gvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~liaP~t~~eri~~i~~~~ 171 (267)
T 3vnd_A 96 MPIGL-LLYANLVFANGIDEFYTKAQAA---GVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQG 171 (267)
T ss_dssp CCEEE-EECHHHHHHHCHHHHHHHHHHH---TCCEEEETTSCGGGCHHHHHHHHHTTCEEECEECTTCCHHHHHHHHHHC
T ss_pred CCEEE-EecCcHHHHhhHHHHHHHHHHc---CCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHhC
Confidence 35544 34433 366999999998887 77888888776544556667777777555544443 446677788888
Q ss_pred C-EEEeCCCCCCCcH------HHHHHHH-----cCCceEEcCCCCcc--c----ceecCceEEEec
Q 007224 479 D-FILIPSRFEPCGL------IQLHAMR-----YGTVPIVASTGGLV--D----TVEEGFTGFQMG 526 (612)
Q Consensus 479 d-i~l~pS~~E~~gl------~~lEAma-----~G~PvI~s~~gg~~--e----~v~~g~~G~l~~ 526 (612)
+ ++...|..-..|. .+.|-+. ..+|+++ .+|+. | .+..+-.|+++|
T Consensus 172 ~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~~~~~pv~v--GfGI~~~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 172 EGYTYLLSRAGVTGTESKAGEPIENILTQLAEFNAPPPLL--GFGIAEPEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp CSCEEESCCCCCC--------CHHHHHHHHHTTTCCCEEE--CSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCcEEEEecCCCCCCccCCcHHHHHHHHHHHHhcCCCEEE--ECCcCCHHHHHHHHHcCCCEEEEC
Confidence 6 4444455422221 1222222 3677776 34443 3 444678899986
No 289
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=26.82 E-value=40 Score=34.50 Aligned_cols=35 Identities=34% Similarity=0.421 Sum_probs=24.6
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+.|+|++|+.. ..|+. .|..|+++|++|+|+=.+
T Consensus 1 m~~~~v~iiG~G------~~Gl~-----~A~~l~~~g~~v~v~E~~ 35 (384)
T 2bi7_A 1 MKSKKILIVGAG------FSGAV-----IGRQLAEKGHQVHIIDQR 35 (384)
T ss_dssp -CCCEEEEECCS------HHHHH-----HHHHHHTTTCEEEEEESS
T ss_pred CCcCCEEEECcC------HHHHH-----HHHHHHHCCCcEEEEEec
Confidence 446899999743 23333 677788899999999654
No 290
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=26.73 E-value=1.3e+02 Score=27.87 Aligned_cols=34 Identities=12% Similarity=0.091 Sum_probs=22.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhC--CCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~--Gh~V~vit~~ 127 (612)
|||+++... .+.....+..++.+. +++|..+...
T Consensus 4 ~ki~vl~sG---------~g~~~~~~l~~l~~~~l~~~I~~Vit~ 39 (212)
T 3av3_A 4 KRLAVFASG---------SGTNFQAIVDAAKRGDLPARVALLVCD 39 (212)
T ss_dssp EEEEEECCS---------SCHHHHHHHHHHHTTCCCEEEEEEEES
T ss_pred cEEEEEEEC---------CcHHHHHHHHHHHhCCCCCeEEEEEeC
Confidence 688777532 233566677788776 6888766654
No 291
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=26.72 E-value=29 Score=33.24 Aligned_cols=34 Identities=21% Similarity=0.197 Sum_probs=24.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||.++|+.- +||+| ..|++.|+++||+|.++...
T Consensus 3 ~k~vlVTGa------sg~IG---~~la~~L~~~G~~V~~~~r~ 36 (267)
T 3rft_A 3 MKRLLVTGA------AGQLG---RVMRERLAPMAEILRLADLS 36 (267)
T ss_dssp EEEEEEEST------TSHHH---HHHHHHTGGGEEEEEEEESS
T ss_pred CCEEEEECC------CCHHH---HHHHHHHHhcCCEEEEEecC
Confidence 565666532 57888 45788899999999887654
No 292
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=26.68 E-value=40 Score=34.44 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=24.8
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
++.++|++|+.. ..|+. +|..|+++|++|+|+=.
T Consensus 21 ~~~~dV~IVGaG------~aGl~-----~A~~La~~G~~V~v~E~ 54 (407)
T 3rp8_A 21 QGHMKAIVIGAG------IGGLS-----AAVALKQSGIDCDVYEA 54 (407)
T ss_dssp --CCEEEEECCS------HHHHH-----HHHHHHHTTCEEEEEES
T ss_pred CCCCEEEEECCC------HHHHH-----HHHHHHhCCCCEEEEeC
Confidence 446899999753 24444 78889999999999943
No 293
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=26.59 E-value=52 Score=32.39 Aligned_cols=24 Identities=21% Similarity=0.311 Sum_probs=19.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
+|++| ..|++.|.++||+|.++..
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 10 CGFLG---SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEEC
T ss_pred CchhH---HHHHHHHHhCCCEEEEEeC
Confidence 47777 5577889999999998864
No 294
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=26.51 E-value=41 Score=32.92 Aligned_cols=36 Identities=22% Similarity=0.271 Sum_probs=28.0
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecC
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (612)
..+|+|++|+. |.+....+..|.+.|++|+|+.+..
T Consensus 11 l~~k~VLVVGg-----------G~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 11 LKDKRILLIGG-----------GEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CTTCEEEEEEE-----------SHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred cCCCEEEEECC-----------cHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35788888852 2356778888999999999999863
No 295
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=26.34 E-value=40 Score=32.81 Aligned_cols=35 Identities=29% Similarity=0.384 Sum_probs=25.7
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCC---eEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH---RVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh---~V~vit~~ 127 (612)
|+.|||.||+. |.+-..++..|.+.|| +|+++.+.
T Consensus 1 M~~~~I~iIG~-----------G~mG~aia~~l~~~g~~~~~V~v~dr~ 38 (280)
T 3tri_A 1 MNTSNITFIGG-----------GNMARNIVVGLIANGYDPNRICVTNRS 38 (280)
T ss_dssp -CCSCEEEESC-----------SHHHHHHHHHHHHTTCCGGGEEEECSS
T ss_pred CCCCEEEEEcc-----------cHHHHHHHHHHHHCCCCCCeEEEEeCC
Confidence 45689999852 3344668899999999 88887654
No 296
>1ybx_A Conserved hypothetical protein; ST genomics, PSI, protein structure initiative, southeast COLL for structural genomics, secsg; HET: MSE; 1.80A {Clostridium thermocellum}
Probab=26.33 E-value=1.5e+02 Score=25.73 Aligned_cols=51 Identities=24% Similarity=0.346 Sum_probs=37.2
Q ss_pred CCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 501 GTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 501 G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.+-|-++..||++.++-+|..-+. .-..+.++++|.|++.|.+.|..++++
T Consensus 66 ~~eveg~sGgGlVkVtvnG~~ev~--~I~Idp~lldpeD~E~LeDLI~aAvNd 116 (143)
T 1ybx_A 66 EKTVEASAGGGAVTVVATGRKDIK--EITIKPEVVDPDDVEMLQDLILAAVNE 116 (143)
T ss_dssp HCEEEEEETTTTEEEEEETTCCEE--EEEECGGGCCTTCHHHHHHHHHHHHHH
T ss_pred cCEEEEEECCCEEEEEEecCceEE--EEEECHHHcCCcCHHHHHHHHHHHHHH
Confidence 445777777888887776642221 234477788999999999999999987
No 297
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=26.24 E-value=3.9e+02 Score=24.74 Aligned_cols=68 Identities=16% Similarity=0.168 Sum_probs=37.1
Q ss_pred HhcCEEEeCCCC-C----CCcHHHHHHHH--cCCceEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHH
Q 007224 476 AGADFILIPSRF-E----PCGLIQLHAMR--YGTVPIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS 544 (612)
Q Consensus 476 ~~adi~l~pS~~-E----~~gl~~lEAma--~G~PvI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la 544 (612)
.+++.+++++.. + +..+..++.+. .++|+|++..-. +.++...|..|+++|+--.. .+.++.++.
T Consensus 164 ~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~----~~~~~~~~~ 239 (252)
T 1ka9_F 164 LGAGEILLTSMDRDGTKEGYDLRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHF----GEIPIPKLK 239 (252)
T ss_dssp HTCCEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHT----TSSCHHHHH
T ss_pred cCCCEEEEecccCCCCcCCCCHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHc----CCCCHHHHH
Confidence 348877766432 2 33466665554 489999974211 22344447789988643211 234566555
Q ss_pred HHH
Q 007224 545 TTV 547 (612)
Q Consensus 545 ~~l 547 (612)
+.+
T Consensus 240 ~~l 242 (252)
T 1ka9_F 240 RYL 242 (252)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 298
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=26.09 E-value=32 Score=34.81 Aligned_cols=32 Identities=22% Similarity=0.350 Sum_probs=24.0
Q ss_pred c-eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 L-NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 M-kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
| ||++|+. |..| ..++..|++.||+|+++...
T Consensus 15 M~kI~iIG~--------G~mG---~~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 15 LNKAVVFGS--------GAFG---TALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEEECC--------SHHH---HHHHHHHTTTEEEEEEECSC
T ss_pred cCeEEEECC--------CHHH---HHHHHHHHhCCCEEEEEECC
Confidence 5 9999973 4444 45788899999999988643
No 299
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=26.07 E-value=68 Score=30.82 Aligned_cols=33 Identities=27% Similarity=0.406 Sum_probs=24.1
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 23 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 23 EVALVTGA------TSGIG---LEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp CEEEEETC------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 55666532 57887 56788899999999887643
No 300
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=26.07 E-value=56 Score=32.55 Aligned_cols=32 Identities=28% Similarity=0.405 Sum_probs=24.9
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
.|||.||+ .||.| ...+|..|.++||+|++.=
T Consensus 4 ~~~i~~iG--------iGg~G--ms~~A~~L~~~G~~V~~~D 35 (326)
T 3eag_A 4 MKHIHIIG--------IGGTF--MGGLAAIAKEAGFEVSGCD 35 (326)
T ss_dssp CCEEEEES--------CCSHH--HHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEEEE--------ECHHH--HHHHHHHHHhCCCEEEEEc
Confidence 46888887 57777 3357788999999999873
No 301
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=26.06 E-value=38 Score=35.68 Aligned_cols=39 Identities=10% Similarity=0.176 Sum_probs=29.9
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhC--CCeEEEEeecC
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRY 128 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~--Gh~V~vit~~~ 128 (612)
+|+|+++.. | ..|=-.-.-.|++.|+++ ||+|+++++..
T Consensus 9 ~~~vv~~p~---p---~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~ 49 (463)
T 2acv_A 9 NSELIFIPA---P---GIGHLASALEFAKLLTNHDKNLYITVFCIKF 49 (463)
T ss_dssp CEEEEEECC---S---STTTHHHHHHHHHHHHHTCTTEEEEEEECCC
T ss_pred CCEEEEEcC---c---ccchHHHHHHHHHHHHhcCCCcEEEEEEcCC
Confidence 578888862 3 344445677899999999 99999998763
No 302
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=26.03 E-value=43 Score=31.48 Aligned_cols=25 Identities=20% Similarity=0.271 Sum_probs=19.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 sggiG---~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 16 SQGIG---LATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CChHH---HHHHHHHHHCCCEEEEECCC
Confidence 57777 56888899999999887654
No 303
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=25.98 E-value=61 Score=30.47 Aligned_cols=25 Identities=20% Similarity=0.337 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 14 s~giG---~~ia~~l~~~G~~V~~~~r~ 38 (245)
T 1uls_A 14 AHGIG---RATLELFAKEGARLVACDIE 38 (245)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 55788899999999887643
No 304
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=25.93 E-value=2.7e+02 Score=22.75 Aligned_cols=108 Identities=13% Similarity=0.076 Sum_probs=58.6
Q ss_pred EEEEEeCCchhHHHHHHHHHHH--CCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCceE
Q 007224 434 QIIVLGTGKKPMEKQLEQLEIL--YPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~--~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~PvI 505 (612)
+++|+.+.. .....+...... .+..+... .-+...+-..+. ..|++++-... +.-|+.+++.+. ..+|+|
T Consensus 4 ~ILivdd~~-~~~~~l~~~L~~~~~~~~~~~~-~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii 81 (141)
T 3cu5_A 4 RILIVDDEK-LTRDGLIANINWKALSFDQIDQ-ADDGINAIQIALKHPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVI 81 (141)
T ss_dssp EEEEECSCH-HHHHHHHHHCCGGGSCCSEEEE-ESSHHHHHHHHTTSCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEE
T ss_pred eEEEEeCCH-HHHHHHHHHHHHccCCcEEeee-cccHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEE
Confidence 566776654 233344443321 22222212 223344333443 35888865443 345676666664 467777
Q ss_pred EcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.-.... ..+.+..|..+++. .|.+.+++.++|.+++..
T Consensus 82 ~ls~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~i~~~~~~ 123 (141)
T 3cu5_A 82 FMSGYSDKEYLKAAIKFRAIRYVE----------KPIDPSEIMDALKQSIQT 123 (141)
T ss_dssp EECCSTTTCCC------CCCEEEC----------SSCCHHHHHHHHHHHHHH
T ss_pred EEeCCCcHHHHHHHHhCCccEEEe----------CCCCHHHHHHHHHHHHHH
Confidence 654322 33455567788876 899999999999988865
No 305
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=25.88 E-value=1.8e+02 Score=26.16 Aligned_cols=136 Identities=12% Similarity=0.036 Sum_probs=69.8
Q ss_pred cEEEEEc-Cc--ccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHH-------
Q 007224 404 PVIGFIG-RL--EEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH------- 472 (612)
Q Consensus 404 ~~il~iG-rl--~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~------- 472 (612)
+.|..+| |- ....+.+..-+....|.+.++.++--| +.........+-+.+.+.....+..- ..+..+
T Consensus 14 ~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGG-g~~Gim~aa~~gAl~~gG~tigVlP~~~~~~~~~~~~~~i 92 (176)
T 2iz6_A 14 PIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGG-RSLGVMHEAMKGAKEAGGTTIGVLPGPDTSEISDAVDIPI 92 (176)
T ss_dssp CEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEEC-SSSSHHHHHHHHHHHTTCCEEEEECC-----CCTTCSEEE
T ss_pred CeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECC-CccCHhHHHHHHHHHcCCEEEEEeCchhhhhhccCCceeE
Confidence 3444455 33 223344444444444444676666544 42224455555554444444444221 111111
Q ss_pred ----------HHHHhcCEEEeCCCCCCCcH--HHHHHHHcCCceEEcCCCCccc-ceecC-ceEEEecccccccCCCCCC
Q 007224 473 ----------MIIAGADFILIPSRFEPCGL--IQLHAMRYGTVPIVASTGGLVD-TVEEG-FTGFQMGSFSVDCEAVDPV 538 (612)
Q Consensus 473 ----------~~l~~adi~l~pS~~E~~gl--~~lEAma~G~PvI~s~~gg~~e-~v~~g-~~G~l~~~~~~~~~~v~~~ 538 (612)
.+...||.+|+-. -++|. .+.||+..++||++-+.-+..+ ++.+. ...+. -.+
T Consensus 93 ~~~~~~~Rk~~m~~~sda~Ivlp--Gg~GTL~E~~~al~~~kpV~~l~~~~~~~gfi~~~~~~~i~-----------~~~ 159 (176)
T 2iz6_A 93 VTGLGSARDNINALSSNVLVAVG--MGPGTAAEVALALKAKKPVVLLGTQPEAEKFFTSLDAGLVH-----------VAA 159 (176)
T ss_dssp ECCCCSSSCCCCGGGCSEEEEES--CCHHHHHHHHHHHHTTCCEEEESCCHHHHHHHHHHCTTTEE-----------EES
T ss_pred EcCCHHHHHHHHHHhCCEEEEec--CCccHHHHHHHHHHhCCcEEEEcCcccccccCChhhcCeEE-----------EcC
Confidence 1445677766532 14554 4888999999999998632111 12111 12232 357
Q ss_pred CHHHHHHHHHHHHHh
Q 007224 539 DVAAVSTTVRRALAT 553 (612)
Q Consensus 539 d~~~la~~l~~ll~~ 553 (612)
|++++.+.|.+.+..
T Consensus 160 ~~~e~~~~l~~~~~~ 174 (176)
T 2iz6_A 160 DVAGAIAAVKQLLAK 174 (176)
T ss_dssp SHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHh
Confidence 899999999888764
No 306
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=25.88 E-value=69 Score=30.58 Aligned_cols=46 Identities=11% Similarity=-0.096 Sum_probs=27.3
Q ss_pred CCCceEEEEeccccCc----cccccHH-HHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPW----SKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~----~~~GG~~-~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|..+||++|.+.+..+ -..-|.. .=+..-...|.+.|++|+++++.
T Consensus 1 m~m~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~ 51 (244)
T 3kkl_A 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSET 51 (244)
T ss_dssp --CCEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESS
T ss_pred CCCCEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3446899998864211 0112332 22333446688999999999987
No 307
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=25.84 E-value=44 Score=35.20 Aligned_cols=32 Identities=31% Similarity=0.343 Sum_probs=24.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++|+. |-+| ..++..|+++||+|+++-..
T Consensus 3 mkI~VIG~--------G~vG---~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGI--------GYVG---LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECc--------CHHH---HHHHHHHHhcCCEEEEEECC
Confidence 89999974 3333 44888899999999988643
No 308
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=25.82 E-value=50 Score=32.16 Aligned_cols=24 Identities=38% Similarity=0.332 Sum_probs=18.6
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
+|++| ..+++.|.++||+|.++..
T Consensus 10 tG~iG---~~l~~~L~~~G~~V~~~~r 33 (322)
T 2p4h_X 10 TGFLG---SWIIKSLLENGYSVNTTIR 33 (322)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEECC
T ss_pred hhHHH---HHHHHHHHHCCCEEEEEEe
Confidence 46676 5577889999999988764
No 309
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=25.82 E-value=69 Score=30.10 Aligned_cols=39 Identities=18% Similarity=0.208 Sum_probs=28.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||+.|+..- + .-|-.+.+..|+.+|+++|++|.++=..
T Consensus 2 ~~vi~v~s~k-g---GvGKTt~a~~LA~~la~~g~~VlliD~D 40 (260)
T 3q9l_A 2 ARIIVVTSGK-G---GVGKTTSSAAIATGLAQKGKKTVVIDFA 40 (260)
T ss_dssp CEEEEEECSS-T---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCC-C---CCcHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 4676666430 1 2366778889999999999999998654
No 310
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=25.79 E-value=41 Score=31.56 Aligned_cols=25 Identities=20% Similarity=0.341 Sum_probs=19.7
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 20 sggiG---~~la~~l~~~G~~V~~~~r~ 44 (255)
T 1fmc_A 20 GAGIG---KEIAITFATAGASVVVSDIN 44 (255)
T ss_dssp TSHHH---HHHHHHHHTTTCEEEEEESC
T ss_pred ccHHH---HHHHHHHHHCCCEEEEEcCC
Confidence 47777 56788899999999887643
No 311
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=25.74 E-value=60 Score=30.74 Aligned_cols=25 Identities=28% Similarity=0.330 Sum_probs=19.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 14 s~gIG---~~ia~~l~~~G~~V~~~~r~ 38 (254)
T 1hdc_A 14 ARGLG---AEAARQAVAAGARVVLADVL 38 (254)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56788899999999887643
No 312
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=25.73 E-value=36 Score=31.32 Aligned_cols=37 Identities=14% Similarity=0.069 Sum_probs=27.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++|... |. .++ +.....+++++.+.|++|.++-.
T Consensus 2 mkiLiI~gs--p~--~~~-s~l~~~l~~~~~~~g~ev~~~dL 38 (192)
T 3f2v_A 2 PKTLIILAH--PN--ISQ-STVHKHWSDAVRQHTDRFTVHEL 38 (192)
T ss_dssp CCEEEEECC--TT--GGG-CSHHHHHHHHHTTCTTTEEEEEH
T ss_pred CEEEEEEeC--CC--ccH-HHHHHHHHHHHHhCCCeEEEEEc
Confidence 799999975 64 232 35677788888888999998854
No 313
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=25.71 E-value=2.5e+02 Score=22.17 Aligned_cols=107 Identities=13% Similarity=0.156 Sum_probs=62.7
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH-----cCCceE
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR-----YGTVPI 505 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma-----~G~PvI 505 (612)
+++|+.+.. ...+.++......+..+. .--+....-..+. ..|++++-... +.-|..+++.+. ..+|+|
T Consensus 4 ~ilivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii 80 (127)
T 2jba_A 4 RILVVEDEA-PIREMVCFVLEQNGFQPV--EAEDYDSAVNQLNEPWPDLILLAWMLPGGSGIQFIKHLRRESMTRDIPVV 80 (127)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EECSHHHHHTTCSSSCCSEEEEESEETTEEHHHHHHHHHTSTTTTTSCEE
T ss_pred EEEEEcCCH-HHHHHHHHHHHHCCceEE--EeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhCcccCCCCEE
Confidence 566776654 344555555544443232 2223333333332 35777764433 335677777775 356776
Q ss_pred EcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.-.... ..+.+..|..+++. .|.+.+++...|.+++..
T Consensus 81 ~~s~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~l~~~i~~~~~~ 122 (127)
T 2jba_A 81 MLTARGEEEDRVRGLETGADDCIT----------KPFSPKELVARIKAVMRR 122 (127)
T ss_dssp EEEETTHHHHHHTTCCCSCSEEEE----------ESCCHHHHHHHHHHHHHC
T ss_pred EEeCCCCHHHHHHHHhcCCCeEEe----------CCCCHHHHHHHHHHHHhc
Confidence 643222 33455667788987 899999999999988764
No 314
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=25.65 E-value=64 Score=30.71 Aligned_cols=24 Identities=21% Similarity=0.387 Sum_probs=19.4
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++|++|.++..
T Consensus 25 sggiG---~~~a~~l~~~G~~V~~~~r 48 (278)
T 2bgk_A 25 AGGIG---ETTAKLFVRYGAKVVIADI 48 (278)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEcC
Confidence 57777 5688889999999988754
No 315
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=25.63 E-value=49 Score=31.48 Aligned_cols=33 Identities=24% Similarity=0.411 Sum_probs=23.6
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 30 k~vlITGa------s~gIG---~~la~~l~~~G~~V~~~~r~ 62 (262)
T 3rkr_A 30 QVAVVTGA------SRGIG---AAIARKLGSLGARVVLTARD 62 (262)
T ss_dssp CEEEESST------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 45556532 47777 56788999999998877643
No 316
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=25.57 E-value=45 Score=32.17 Aligned_cols=33 Identities=24% Similarity=0.433 Sum_probs=24.6
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 22 k~vlVTGa------s~gIG---~aia~~La~~G~~V~~~~r~ 54 (272)
T 2nwq_A 22 STLFITGA------TSGFG---EACARRFAEAGWSLVLTGRR 54 (272)
T ss_dssp CEEEESST------TTSSH---HHHHHHHHHTTCEEEEEESC
T ss_pred cEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 56666643 57777 56888899999999887643
No 317
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=25.53 E-value=72 Score=31.20 Aligned_cols=42 Identities=12% Similarity=0.068 Sum_probs=30.4
Q ss_pred CCCceEEEEeccccCccccccHH-HHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~-~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+.+|||++|..+ |. .+|.. ..+..++..+.+.|++|.++-..
T Consensus 56 ~~~mKILiI~GS--~R--~~S~T~~La~~~~~~l~~~G~eveiidL~ 98 (279)
T 2fzv_A 56 APPVRILLLYGS--LR--ARSFSRLAVEEAARLLQFFGAETRIFDPS 98 (279)
T ss_dssp CSCCEEEEEESC--CS--SSCHHHHHHHHHHHHHHHTTCEEEEBCCT
T ss_pred CCCCEEEEEEeC--CC--CCCHHHHHHHHHHHHHhhCCCEEEEEehh
Confidence 457999999976 43 35544 45555778888889999988654
No 318
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=25.53 E-value=61 Score=30.55 Aligned_cols=40 Identities=8% Similarity=-0.005 Sum_probs=29.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhC-CCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~-Gh~V~vit~~ 127 (612)
|||++|..+ |. +.|-...++..++..|.+. |++|.++-..
T Consensus 2 mkIliI~gS--~r-~~s~T~~la~~i~~~l~~~~g~~v~~~dl~ 42 (242)
T 1sqs_A 2 NKIFIYAGV--RN-HNSKTLEYTKRLSSIISSRNNVDISFRTPF 42 (242)
T ss_dssp CEEEEEECC--CC-TTCHHHHHHHHHHHHHHHHSCCEEEEECTT
T ss_pred CeEEEEECC--CC-CCChHHHHHHHHHHHHHHhcCCeEEEEEcc
Confidence 799999875 53 2355566667788888887 9999888654
No 319
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=25.51 E-value=2.4e+02 Score=22.07 Aligned_cols=107 Identities=16% Similarity=0.134 Sum_probs=62.8
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc-----CCceE
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTVPI 505 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~-----G~PvI 505 (612)
+++|+.+.. .....++.+....+..+. ...+....-..+. ..|++++-... +.-|+.+++.+.. .+|+|
T Consensus 3 ~ilivdd~~-~~~~~l~~~L~~~~~~v~--~~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii 79 (124)
T 1mb3_A 3 KVLIVEDNE-LNMKLFHDLLEAQGYETL--QTREGLSALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVV 79 (124)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EESCHHHHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEE
T ss_pred EEEEEcCCH-HHHHHHHHHHHHcCcEEE--EeCCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHcCccccCCcEE
Confidence 456666544 345555555555443332 2234444433333 46888875443 3457777777753 56777
Q ss_pred EcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.-.... ..+..+.|..+++. .|.+.+++.+.+.+++..
T Consensus 80 ~~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 121 (124)
T 1mb3_A 80 AVTAFAMKGDEERIREGGCEAYIS----------KPISVVHFLETIKRLLER 121 (124)
T ss_dssp EEC------CHHHHHHHTCSEEEC----------SSCCHHHHHHHHHHHHSC
T ss_pred EEECCCCHHHHHHHHhCCCCEEEe----------CCCCHHHHHHHHHHHHhc
Confidence 654322 23344567788987 899999999999988753
No 320
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=25.42 E-value=63 Score=30.60 Aligned_cols=25 Identities=28% Similarity=0.416 Sum_probs=20.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 15 s~gIG---~~ia~~l~~~G~~V~~~~r~ 39 (256)
T 2d1y_A 15 ARGIG---RAIAQAFAREGALVALCDLR 39 (256)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888899999999887654
No 321
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=25.39 E-value=61 Score=30.36 Aligned_cols=25 Identities=32% Similarity=0.477 Sum_probs=20.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 20 sggiG---~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 20 GSGIG---LEICRAFAASGARLILIDRE 44 (254)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56788899999999888643
No 322
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=25.35 E-value=1.5e+02 Score=28.90 Aligned_cols=91 Identities=16% Similarity=0.109 Sum_probs=55.7
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEe
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILI 483 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~ 483 (612)
..|+++|-=. -|...++.++.+. ++++++-+-+.. .+..+++..+++... +.. ..++++..|++++
T Consensus 7 ~~igiIG~G~--~g~~~~~~~l~~~--~~~~l~av~d~~---~~~~~~~a~~~~~~~-----~~~--~~~ll~~~D~V~i 72 (308)
T 3uuw_A 7 IKMGMIGLGS--IAQKAYLPILTKS--ERFEFVGAFTPN---KVKREKICSDYRIMP-----FDS--IESLAKKCDCIFL 72 (308)
T ss_dssp CEEEEECCSH--HHHHHTHHHHTSC--SSSEEEEEECSC---HHHHHHHHHHHTCCB-----CSC--HHHHHTTCSEEEE
T ss_pred CcEEEEecCH--HHHHHHHHHHHhC--CCeEEEEEECCC---HHHHHHHHHHcCCCC-----cCC--HHHHHhcCCEEEE
Confidence 4677777511 1222345555544 678888555544 334556666665211 222 2345669999998
Q ss_pred CCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 484 PSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 484 pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.+....-.-.+.+|+..|++|++-.
T Consensus 73 ~tp~~~h~~~~~~al~~gk~vl~EK 97 (308)
T 3uuw_A 73 HSSTETHYEIIKILLNLGVHVYVDK 97 (308)
T ss_dssp CCCGGGHHHHHHHHHHTTCEEEECS
T ss_pred eCCcHhHHHHHHHHHHCCCcEEEcC
Confidence 8776555556788999999998864
No 323
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=25.30 E-value=36 Score=33.84 Aligned_cols=35 Identities=29% Similarity=0.549 Sum_probs=24.8
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCC----CeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG----HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G----h~V~vit~~ 127 (612)
|..|||.||+. |..| ..++..|.+.| |+|+++...
T Consensus 20 ~~~mkI~iIG~--------G~mG---~ala~~L~~~G~~~~~~V~v~~r~ 58 (322)
T 2izz_A 20 FQSMSVGFIGA--------GQLA---FALAKGFTAAGVLAAHKIMASSPD 58 (322)
T ss_dssp --CCCEEEESC--------SHHH---HHHHHHHHHTTSSCGGGEEEECSC
T ss_pred cCCCEEEEECC--------CHHH---HHHHHHHHHCCCCCcceEEEECCC
Confidence 55689999962 4333 56788899999 899887554
No 324
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=25.29 E-value=59 Score=30.61 Aligned_cols=25 Identities=32% Similarity=0.529 Sum_probs=20.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 24 s~gIG---~~ia~~l~~~G~~V~~~~r~ 48 (247)
T 1uzm_A 24 NRGIG---LAIAQRLAADGHKVAVTHRG 48 (247)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56788899999999888654
No 325
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=25.28 E-value=64 Score=30.09 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=19.7
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..++..|+++|++|.++...
T Consensus 11 sggiG---~~~a~~l~~~G~~V~~~~r~ 35 (250)
T 2cfc_A 11 SSGNG---LAIATRFLARGDRVAALDLS 35 (250)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56788899999999888643
No 326
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=25.26 E-value=2.7e+02 Score=26.33 Aligned_cols=39 Identities=21% Similarity=0.487 Sum_probs=23.9
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++|++. .+-.....+...++.++.-|-+|..+++.
T Consensus 1 ~mrilvINPn-----ts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 1 SVRIQVINPN-----TSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp CEEEEEECSS-----CCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CCEEEEEeCC-----CCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 3899999854 12334444555555555556677776655
No 327
>2k6g_A Replication factor C subunit 1; protein, BRCT, DNA binding, activator, alternative splicing, ATP-binding, DNA replication, DNA- binding; NMR {Homo sapiens} PDB: 2k7f_A
Probab=25.24 E-value=1.4e+02 Score=24.64 Aligned_cols=38 Identities=18% Similarity=0.264 Sum_probs=20.4
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhccc-------CCcEEEEEeCCc
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIK-------ENVQIIVLGTGK 442 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~-------~~~~lvivG~g~ 442 (612)
..|++.|.+... .-+.+.+.+..+-. .+..++|+|...
T Consensus 36 ~~~v~TG~l~~~-~R~e~~~~i~~~Gg~v~~sVSkkTd~LV~G~~~ 80 (109)
T 2k6g_A 36 LIFVITGVLESI-ERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDS 80 (109)
T ss_dssp CEEEEESBCSSC-CHHHHHHHHHHTTCEEESSCCTTCCEEEECBCC
T ss_pred CEEEEeeeCCCC-CHHHHHHHHHHcCCEeeCcccCCceEEEECCCC
Confidence 467777877532 12344444444311 366677777643
No 328
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=25.23 E-value=2.7e+02 Score=22.77 Aligned_cols=92 Identities=16% Similarity=0.114 Sum_probs=44.1
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEE-eccChHHHHHHHH---hcCEEEeCCCC-CCCcHHHHHHHH--cCCce
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGV-AKFNIPLAHMIIA---GADFILIPSRF-EPCGLIQLHAMR--YGTVP 504 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~-~~~~~~~~~~~l~---~adi~l~pS~~-E~~gl~~lEAma--~G~Pv 504 (612)
..+++|+.+ +......++++..+.++ .... .--+...+...+. ..|++++-... +.-|+.+++.+. ...|+
T Consensus 13 ~~~vlivdd-~~~~~~~l~~~L~~~~~-~~~v~~~~~~~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~i 90 (145)
T 3kyj_B 13 PYNVMIVDD-AAMMRLYIASFIKTLPD-FKVVAQAANGQEALDKLAAQPNVDLILLDIEMPVMDGMEFLRHAKLKTRAKI 90 (145)
T ss_dssp SEEEEEECS-CHHHHHHHHHHHTTCTT-EEEEEEESSHHHHHHHHHHCTTCCEEEECTTSCCCTTCHHHHHHHHHCCCEE
T ss_pred CCeEEEEcC-CHHHHHHHHHHHHhCCC-ceEEEEECCHHHHHHHHhcCCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCe
Confidence 344555554 33455566665555422 2222 1223444433443 35888875543 345666666554 23444
Q ss_pred EEcCC--CC----cccceecCceEEEe
Q 007224 505 IVAST--GG----LVDTVEEGFTGFQM 525 (612)
Q Consensus 505 I~s~~--gg----~~e~v~~g~~G~l~ 525 (612)
|.-.. .. ..+.+..|..+|+.
T Consensus 91 iil~~~~~~~~~~~~~~~~~ga~~~l~ 117 (145)
T 3kyj_B 91 CMLSSVAVSGSPHAARARELGADGVVA 117 (145)
T ss_dssp C-CBSSCSTTSSHHHHHHHTTCSCCCB
T ss_pred EEEEEeccCChHHHHHHHhCCCCEEEe
Confidence 43322 11 22445567778876
No 329
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=25.20 E-value=4.6e+02 Score=25.18 Aligned_cols=118 Identities=10% Similarity=0.008 Sum_probs=71.4
Q ss_pred CcEEEEEcCcc--cccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc--ChHHHHHHHHhc
Q 007224 403 IPVIGFIGRLE--EQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--NIPLAHMIIAGA 478 (612)
Q Consensus 403 ~~~il~iGrl~--~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~--~~~~~~~~l~~a 478 (612)
.|++++ +=+. .+.|.+.+++.+.+. .+.-+|+.+-+.+....+.+..++++......+.. +.+.+..+.+.+
T Consensus 98 ~Pivlm-~Y~n~v~~~g~~~f~~~~~~a---GvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~ 173 (271)
T 3nav_A 98 TPIGLL-MYANLVYARGIDDFYQRCQKA---GVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLG 173 (271)
T ss_dssp SCEEEE-ECHHHHHHTCHHHHHHHHHHH---TCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHC
T ss_pred CCEEEE-ecCcHHHHHhHHHHHHHHHHC---CCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHC
Confidence 355543 4333 466999999988887 67888888776545566777777787655555544 346666777777
Q ss_pred CEEEeC-CCC--CC----CcHHHHHHHH-----cCCceEEcCCCCcc--c----ceecCceEEEec
Q 007224 479 DFILIP-SRF--EP----CGLIQLHAMR-----YGTVPIVASTGGLV--D----TVEEGFTGFQMG 526 (612)
Q Consensus 479 di~l~p-S~~--E~----~gl~~lEAma-----~G~PvI~s~~gg~~--e----~v~~g~~G~l~~ 526 (612)
.-|+.. |.. .| ++..+.|.+. ..+|+++ .+|+. | .+..+-.|.++|
T Consensus 174 ~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v--GfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 174 KGYTYLLSRAGVTGAETKANMPVHALLERLQQFDAPPALL--GFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp CSCEEECCCC--------CCHHHHHHHHHHHHTTCCCEEE--CSSCCSHHHHHHHHHTTCSEEEES
T ss_pred CCeEEEEeccCCCCcccCCchhHHHHHHHHHHhcCCCEEE--ECCCCCHHHHHHHHHcCCCEEEEC
Confidence 544443 442 22 3333333322 3688887 33442 3 444678899986
No 330
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=25.19 E-value=75 Score=29.82 Aligned_cols=42 Identities=19% Similarity=0.159 Sum_probs=27.8
Q ss_pred CceEEEEeccccCcc--ccccHHH-HhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWS--KTGGLGD-VLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~--~~GG~~~-~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++|... |.. ..++... .+..+...+.+.||+|.++-..
T Consensus 25 M~kiLiI~gs--p~~~~s~~s~n~~L~~~~~~~l~~~g~ev~~~dL~ 69 (218)
T 3rpe_A 25 MSNVLIINAM--KEFAHSKGALNLTLTNVAADFLRESGHQVKITTVD 69 (218)
T ss_dssp CCCEEEEECC--CCBTTBCSHHHHHHHHHHHHHHHHTTCCEEEEEGG
T ss_pred CcceEEEEeC--CCcccCCChHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 3689999875 531 1244443 4445666677899999998764
No 331
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=25.10 E-value=66 Score=30.71 Aligned_cols=25 Identities=16% Similarity=0.371 Sum_probs=20.1
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 15 s~gIG---~aia~~l~~~G~~V~~~~r~ 39 (263)
T 2a4k_A 15 ASGIG---RAALDLFAREGASLVAVDRE 39 (263)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57887 56888899999999887644
No 332
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=25.10 E-value=2.7e+02 Score=22.40 Aligned_cols=109 Identities=15% Similarity=0.180 Sum_probs=63.9
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCceE
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~PvI 505 (612)
.+++|+.+.. .....++.+....+. +...... +...+-..+. ..|++++-... ..-|+.+++.+. ..+|+|
T Consensus 4 ~~Ilivdd~~-~~~~~l~~~l~~~~~-~~~v~~~~~~~~al~~~~~~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii 81 (133)
T 3b2n_A 4 TSLIIAEDQN-MLRQAMVQLIKLHGD-FEILADTDNGLDAMKLIEEYNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVI 81 (133)
T ss_dssp EEEEEECSCH-HHHHHHHHHHHHHSS-EEEEEEESCHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEE
T ss_pred eEEEEECCCH-HHHHHHHHHHhhCCC-cEEEEEcCCHHHHHHHHhhcCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEE
Confidence 3566666544 345556555554432 2222222 3444333443 46888875544 335677777665 356776
Q ss_pred EcCC-CC---cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VAST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~-gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.-.. .. ..+.+..|..+++. .|.+.+++.+.|.+++..
T Consensus 82 ~ls~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 123 (133)
T 3b2n_A 82 IVTTFKRPGYFEKAVVNDVDAYVL----------KERSIEELVETINKVNNG 123 (133)
T ss_dssp EEESCCCHHHHHHHHHTTCSEEEE----------TTSCHHHHHHHHHHHHC-
T ss_pred EEecCCCHHHHHHHHHcCCcEEEE----------CCCCHHHHHHHHHHHHcC
Confidence 6432 22 23445568889987 899999999999988764
No 333
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=25.07 E-value=77 Score=29.30 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=28.3
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||++.|+.. -+ .-|-.+....|+.+|+++|++|.++=..
T Consensus 2 ~~~i~v~s~-kg---GvGKTt~a~~LA~~la~~g~~VlliD~D 40 (237)
T 1g3q_A 2 GRIISIVSG-KG---GTGKTTVTANLSVALGDRGRKVLAVDGD 40 (237)
T ss_dssp CEEEEEECS-ST---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred ceEEEEecC-CC---CCCHHHHHHHHHHHHHhcCCeEEEEeCC
Confidence 466666543 01 2366778889999999999999999654
No 334
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=25.03 E-value=3e+02 Score=24.68 Aligned_cols=104 Identities=13% Similarity=0.214 Sum_probs=61.6
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCCCCCcHHHHHHHH--c-CCceEEcC
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRFEPCGLIQLHAMR--Y-GTVPIVAS 508 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~E~~gl~~lEAma--~-G~PvI~s~ 508 (612)
+++|+.+.+ .....+..+....+-.+. .--+...+...+. ..|++++| +.-|+.+++.+. . .+|+|.-.
T Consensus 2 ~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~dlvilp---~~~g~~~~~~lr~~~~~~~ii~lt 75 (223)
T 2hqr_A 2 RVLLIEKNS-VLGGEIEKGLNVKGFMAD--VTESLEDGEYLMDIRNYDLVMVS---DKNALSFVSRIKEKHSSIVVLVSS 75 (223)
T ss_dssp CEEEECSCH-HHHHHHHHHHGGGTCCEE--EESSHHHHHHHHTTSCCSEEEEC---CTTHHHHHHHHHHHCTTSEEEEEE
T ss_pred EEEEEcCCH-HHHHHHHHHHHHCCcEEE--EECCHHHHHHHHhcCCCCEEEeC---CCCHHHHHHHHHhCCCCCcEEEEE
Confidence 345555443 345555555554443333 2224444444444 35888843 335666666654 3 67777654
Q ss_pred CCC----cccceecCceEEEecccccccCCCCCC-CHHHHHHHHHHHHHh
Q 007224 509 TGG----LVDTVEEGFTGFQMGSFSVDCEAVDPV-DVAAVSTTVRRALAT 553 (612)
Q Consensus 509 ~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~-d~~~la~~l~~ll~~ 553 (612)
... ..+.+..|..|++. .|. +.+++..+|..++..
T Consensus 76 ~~~~~~~~~~~~~~Ga~~~l~----------Kp~~~~~~L~~~i~~~~~~ 115 (223)
T 2hqr_A 76 DNPTSEEEVHAFEQGADDYIA----------KPYRSIKALVARIEARLRF 115 (223)
T ss_dssp SSCCHHHHHHHHHHTCSEEEE----------TTCSCTHHHHHHHHHHTSS
T ss_pred CCCCHHHHHHHHHcCCCEEEE----------CCCCCHHHHHHHHHHHhcc
Confidence 332 22344568889987 899 999999999988754
No 335
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=24.99 E-value=62 Score=30.42 Aligned_cols=25 Identities=28% Similarity=0.307 Sum_probs=20.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 22 sggiG---~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 22 AQNIG---LACVTALAEAGARVIIADLD 46 (260)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888899999999888643
No 336
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=24.95 E-value=61 Score=32.93 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=29.3
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
++||++-|.+.- + +-|-.+.+..||.+|+++|++|.++-..
T Consensus 141 ~~~kvIav~s~K-G---GvGKTT~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 141 DKSSVVIFTSPC-G---GVGTSTVAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp TSCEEEEEECSS-T---TSSHHHHHHHHHHHHHHHTCCEEEEECC
T ss_pred CCceEEEEECCC-C---CChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 457777666430 1 2356677788999999999999999654
No 337
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=24.93 E-value=62 Score=30.76 Aligned_cols=25 Identities=24% Similarity=0.298 Sum_probs=19.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 1nff_A 16 ARGMG---ASHVRAMVAEGAKVVFGDIL 40 (260)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57887 55788899999999887643
No 338
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=24.84 E-value=42 Score=32.12 Aligned_cols=33 Identities=18% Similarity=0.227 Sum_probs=24.1
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 28 k~vlVTGa------s~gIG---~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGA------SQRVG---LHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESST------TSHHH---HHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45555532 47777 56888999999999888654
No 339
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=24.82 E-value=84 Score=28.15 Aligned_cols=40 Identities=0% Similarity=0.003 Sum_probs=27.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhC------CCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN------GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~------Gh~V~vit~~ 127 (612)
|||++|..+ |. +.|-...++..+...+.+. |++|.++-..
T Consensus 1 Mkilii~gS--~r-~~~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~ 46 (191)
T 1t0i_A 1 MKVGIIMGS--VR-AKRVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQ 46 (191)
T ss_dssp CEEEEEECC--CC-SSCSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHH
T ss_pred CeEEEEeCC--CC-CCCchHHHHHHHHHHHHHhhccCCCCceEEEEehh
Confidence 899999975 43 2344555666677777776 7999988643
No 340
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=24.81 E-value=3.9e+02 Score=24.21 Aligned_cols=107 Identities=16% Similarity=0.152 Sum_probs=63.9
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc--CCceEEc
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY--GTVPIVA 507 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~--G~PvI~s 507 (612)
.+++|+.+.+ .....++.+....+-.+.. --+...+-..+. ..|++++-... +.-|+.+++.+.. .+|+|.-
T Consensus 6 ~~ILivdd~~-~~~~~l~~~L~~~g~~v~~--~~~~~~al~~l~~~~~dlvilD~~l~~~~g~~~~~~lr~~~~~~ii~l 82 (238)
T 2gwr_A 6 QRILVVDDDA-SLAEMLTIVLRGEGFDTAV--IGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVML 82 (238)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEEE--ECCGGGHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHTTCCCCEEEE
T ss_pred CeEEEEeCCH-HHHHHHHHHHHHCCCEEEE--ECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCCcEEEE
Confidence 4677777654 3445555554444433322 223333333333 46888875443 3457777776653 6777765
Q ss_pred CC-CC---cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 508 ST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 508 ~~-gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
.. .. ..+.+..|..|++. .|.+.+++..+|..++.
T Consensus 83 t~~~~~~~~~~~~~~Ga~~~l~----------Kp~~~~~L~~~i~~~~~ 121 (238)
T 2gwr_A 83 TAKTDTVDVVLGLESGADDYIM----------KPFKPKELVARVRARLR 121 (238)
T ss_dssp EETTCCSCHHHHHHTTCCEEEE----------ESCCHHHHHHHHHHHCC
T ss_pred eCCCCHHHHHHHHHCCCCEEEe----------CCCCHHHHHHHHHHHHh
Confidence 32 22 23445568889987 89999999999998874
No 341
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=24.78 E-value=66 Score=30.30 Aligned_cols=25 Identities=20% Similarity=0.286 Sum_probs=20.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 s~giG---~~ia~~l~~~G~~V~~~~r~ 40 (250)
T 2fwm_X 16 GKGIG---YATALAFVEAGAKVTGFDQA 40 (250)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCc
Confidence 57777 46788899999999887644
No 342
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=24.76 E-value=53 Score=31.40 Aligned_cols=35 Identities=26% Similarity=0.402 Sum_probs=26.2
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 24 ~~k~vlITGa------s~gIG---~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 24 AKRVAFVTGG------MGGLG---AAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp CCCEEEETTT------TSHHH---HHHHHHHHTTTCEEEEEECS
T ss_pred cCCEEEEECC------CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 3577777643 57777 56888999999999888644
No 343
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=24.69 E-value=60 Score=31.75 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=23.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..|++.|.++||+|.++...
T Consensus 2 ~~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r~ 34 (330)
T 2c20_A 2 NSILICGG-------AGYIG---SHAVKKLVDEGLSVVVVDNL 34 (330)
T ss_dssp CEEEEETT-------TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEECC-------CcHHH---HHHHHHHHhCCCEEEEEeCC
Confidence 56655543 46666 56788899999999998643
No 344
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=24.65 E-value=74 Score=28.61 Aligned_cols=41 Identities=5% Similarity=-0.006 Sum_probs=28.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCC--CeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G--h~V~vit~~ 127 (612)
|||++|..+ |....|-...++..++..+.++| ++|.++-..
T Consensus 2 mkilii~~S--~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~dl~ 44 (201)
T 1t5b_A 2 SKVLVLKSS--ILAGYSQSGQLTDYFIEQWREKHVADEITVRDLA 44 (201)
T ss_dssp CEEEEEECC--SSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEETT
T ss_pred CeEEEEEeC--CCCCCChHHHHHHHHHHHHHHhCCCCeEEEEecc
Confidence 799999865 53112445556666788888876 898888654
No 345
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=24.62 E-value=38 Score=33.56 Aligned_cols=34 Identities=15% Similarity=0.339 Sum_probs=23.6
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCC-eEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGH-RVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh-~V~vit~ 126 (612)
+..|||.+|+. |-.| ..++..|++.|| +|+++..
T Consensus 22 ~~~~~I~iIG~--------G~mG---~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 22 SNAMKLGFIGF--------GEAA---SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp ---CEEEEECC--------SHHH---HHHHHHHHHHSCCEEEEECS
T ss_pred CCCCEEEEECc--------cHHH---HHHHHHHHHCCCCeEEEEcC
Confidence 34689999963 3333 568889999999 8888754
No 346
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=24.62 E-value=61 Score=30.56 Aligned_cols=33 Identities=24% Similarity=0.455 Sum_probs=24.4
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 10 k~~lVTGa------s~gIG---~a~a~~l~~~G~~V~~~~r~ 42 (248)
T 3op4_A 10 KVALVTGA------SRGIG---KAIAELLAERGAKVIGTATS 42 (248)
T ss_dssp CEEEESSC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 56667642 57777 56888999999999877543
No 347
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=24.62 E-value=60 Score=32.57 Aligned_cols=25 Identities=36% Similarity=0.347 Sum_probs=19.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|++| ..+++.|.++||+|.+++..
T Consensus 33 tG~iG---~~l~~~L~~~g~~V~~~~r~ 57 (375)
T 1t2a_A 33 TGQDG---SYLAEFLLEKGYEVHGIVRR 57 (375)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 47777 56778899999999998754
No 348
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=24.54 E-value=34 Score=32.57 Aligned_cols=35 Identities=20% Similarity=0.429 Sum_probs=25.1
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCC----CeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG----HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G----h~V~vit~~ 127 (612)
|..|||.+|+. |..| ..++..|++.| |+|+++...
T Consensus 2 m~~m~i~iiG~--------G~mG---~~~a~~l~~~g~~~~~~v~~~~~~ 40 (262)
T 2rcy_A 2 MENIKLGFMGL--------GQMG---SALAHGIANANIIKKENLFYYGPS 40 (262)
T ss_dssp CSSSCEEEECC--------SHHH---HHHHHHHHHHTSSCGGGEEEECSS
T ss_pred CCCCEEEEECc--------CHHH---HHHHHHHHHCCCCCCCeEEEEeCC
Confidence 45789999962 4444 44777888889 899887543
No 349
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=24.52 E-value=33 Score=34.43 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=25.2
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCC-------CeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-------HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-------h~V~vit~~ 127 (612)
|..|||++|+. |..| ..++..|++.| |+|+++...
T Consensus 6 m~~mkI~iIG~--------G~mG---~~~a~~l~~~g~~~~~~~~~V~~~~r~ 47 (354)
T 1x0v_A 6 MASKKVCIVGS--------GNWG---SAIAKIVGGNAAQLAQFDPRVTMWVFE 47 (354)
T ss_dssp -CCEEEEEECC--------SHHH---HHHHHHHHHHHHHCTTEEEEEEEECCC
T ss_pred cCCCeEEEECC--------CHHH---HHHHHHHHhcCCcccCCCCeEEEEEcC
Confidence 55789999973 4444 44677788888 999888654
No 350
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=24.50 E-value=65 Score=30.39 Aligned_cols=33 Identities=18% Similarity=0.283 Sum_probs=24.5
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 23 k~vlITGa------s~gIG---~~la~~l~~~G~~V~~~~r~ 55 (251)
T 3orf_A 23 KNILVLGG------SGALG---AEVVKFFKSKSWNTISIDFR 55 (251)
T ss_dssp CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 55666532 57777 67888999999998888654
No 351
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=24.45 E-value=2.9e+02 Score=24.62 Aligned_cols=106 Identities=12% Similarity=0.102 Sum_probs=63.5
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCCCC-CCCcHHHHHHHH---cCCceEEcCC
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCGLIQLHAMR---YGTVPIVAST 509 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~-E~~gl~~lEAma---~G~PvI~s~~ 509 (612)
+++|+.+.+ ...+.++.+....+ .+.. ..+...+...+...|++++-... +.-|+.+++.+. ..+|+|.-..
T Consensus 4 ~ilivdd~~-~~~~~l~~~L~~~~-~v~~--~~~~~~al~~~~~~dlvllD~~lp~~~g~~~~~~lr~~~~~~~ii~lt~ 79 (220)
T 1p2f_A 4 KIAVVDDDK-NILKKVSEKLQQLG-RVKT--FLTGEDFLNDEEAFHVVVLDVMLPDYSGYEICRMIKETRPETWVILLTL 79 (220)
T ss_dssp EEEEECSCH-HHHHHHHHHHTTTE-EEEE--ESSHHHHHHCCSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEES
T ss_pred eEEEEeCCH-HHHHHHHHHHHhCC-CEEE--ECCHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEEEEEc
Confidence 566666544 34555555554443 2221 12333333333567888875433 345676666664 4677776543
Q ss_pred CC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 510 GG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 510 gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.. ..+.+..|..|++. .|.+.+++.++|..++..
T Consensus 80 ~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 117 (220)
T 1p2f_A 80 LSDDESVLKGFEAGADDYVT----------KPFNPEILLARVKRFLER 117 (220)
T ss_dssp CCSHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCCEEEE----------CCCCHHHHHHHHHHHHcc
Confidence 22 23344567889987 899999999999998864
No 352
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=24.42 E-value=66 Score=30.33 Aligned_cols=25 Identities=20% Similarity=0.306 Sum_probs=20.4
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 21 sggiG---~~~a~~l~~~G~~V~~~~r~ 45 (265)
T 2o23_A 21 ASGLG---LATAERLVGQGASAVLLDLP 45 (265)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888899999999888755
No 353
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=24.39 E-value=80 Score=30.56 Aligned_cols=25 Identities=20% Similarity=0.379 Sum_probs=19.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..++..|+++|++|.++...
T Consensus 27 sggIG---~~la~~l~~~G~~V~~~~r~ 51 (303)
T 1yxm_A 27 ATGIG---KAIVKELLELGSNVVIASRK 51 (303)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56788899999999887643
No 354
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=24.31 E-value=65 Score=30.55 Aligned_cols=25 Identities=24% Similarity=0.388 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..++..|+++|++|.++...
T Consensus 21 s~gIG---~~ia~~l~~~G~~V~~~~r~ 45 (263)
T 3ak4_A 21 SKGIG---AAIARALDKAGATVAIADLD 45 (263)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56788899999999887543
No 355
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=24.31 E-value=84 Score=31.17 Aligned_cols=40 Identities=13% Similarity=0.130 Sum_probs=28.4
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|+++.|... -+ .-|-.+....||.+|+++|++|.++...
T Consensus 12 gm~~i~v~sg-KG---GvGKTTvA~~LA~~lA~~G~rVLlvD~D 51 (324)
T 3zq6_A 12 GKTTFVFIGG-KG---GVGKTTISAATALWMARSGKKTLVISTD 51 (324)
T ss_dssp TBCEEEEEEE-ST---TSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCeEEEEEeC-CC---CchHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 5554444432 11 3366677888999999999999999875
No 356
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=24.29 E-value=32 Score=33.98 Aligned_cols=30 Identities=17% Similarity=0.239 Sum_probs=22.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
.||.||..- .+=..++..|.+.||+|+++-
T Consensus 6 ~kIgfIGLG-----------~MG~~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLG-----------NLGTPIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCS-----------TTHHHHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecH-----------HHHHHHHHHHHHCCCeEEEEe
Confidence 489999742 222558999999999998863
No 357
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=24.26 E-value=2.3e+02 Score=28.28 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=31.9
Q ss_pred HHHHHHhcCEEEeC--CCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILIP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~p--S~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++. ..-|. +.-..++.|--|.-+|-+..|++.+
T Consensus 188 l~ell~~aDvV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRg~~vd 236 (334)
T 2pi1_A 188 LDELLKESDVISLHVPYTKETHHMINEERISLMKDGVYLINTARGKVVD 236 (334)
T ss_dssp HHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSCTTEEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEEeCCCChHHHHhhCHHHHhhCCCCcEEEECCCCcccC
Confidence 45689999998864 32243 4456788888898888888887654
No 358
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=24.22 E-value=3.1e+02 Score=25.81 Aligned_cols=85 Identities=14% Similarity=0.061 Sum_probs=46.0
Q ss_pred HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhcCEEEeCCCCCCCcHHHHH
Q 007224 419 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRFEPCGLIQLH 496 (612)
Q Consensus 419 d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~-~~l~~adi~l~pS~~E~~gl~~lE 496 (612)
+..++.++.+.+-.++.+=+--..+.-.+.++++.+++++-+.+.+.. +.+.+. .+-++||+++.|... .-++-.
T Consensus 46 ~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvsP~~~---~~vi~~ 122 (232)
T 4e38_A 46 EDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVSPGFN---PNTVRA 122 (232)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEECSSCC---HHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEeCCCC---HHHHHH
Confidence 344444444544455555544333335677777887777655555444 334333 466888999888642 112223
Q ss_pred HHHcCCceEE
Q 007224 497 AMRYGTVPIV 506 (612)
Q Consensus 497 Ama~G~PvI~ 506 (612)
+-.+|+|++.
T Consensus 123 ~~~~gi~~ip 132 (232)
T 4e38_A 123 CQEIGIDIVP 132 (232)
T ss_dssp HHHHTCEEEC
T ss_pred HHHcCCCEEc
Confidence 3445555543
No 359
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=24.20 E-value=66 Score=30.34 Aligned_cols=25 Identities=24% Similarity=0.365 Sum_probs=20.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 sggiG---~~la~~l~~~G~~V~~~~r~ 40 (264)
T 2pd6_A 16 GSGIG---RAVSVRLAGEGATVAACDLD 40 (264)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888899999999888644
No 360
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=24.18 E-value=84 Score=30.39 Aligned_cols=40 Identities=18% Similarity=0.136 Sum_probs=28.0
Q ss_pred CceEEEEeccccCccccccHH-HHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~-~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||||+|... |. .+|.. ..+..+...|.+.||+|.++-..
T Consensus 2 MmkiLiI~gS--pr--~~s~t~~la~~~~~~l~~~g~eV~~~dL~ 42 (273)
T 1d4a_A 2 GRRALIVLAH--SE--RTSFNYAMKEAAAAALKKKGWEVVESDLY 42 (273)
T ss_dssp CCEEEEEECC--SC--TTSHHHHHHHHHHHHHHHTTCEEEEEETT
T ss_pred CCEEEEEEeC--CC--CccHHHHHHHHHHHHHHhCCCeEEEEEcc
Confidence 3799999975 53 34444 44445667788899999998654
No 361
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=24.14 E-value=61 Score=32.14 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=25.3
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..|||.+|+. |-.| ..++..|++.||+|+++...
T Consensus 30 ~~~~I~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr~ 63 (320)
T 4dll_A 30 YARKITFLGT--------GSMG---LPMARRLCEAGYALQVWNRT 63 (320)
T ss_dssp CCSEEEEECC--------TTTH---HHHHHHHHHTTCEEEEECSC
T ss_pred CCCEEEEECc--------cHHH---HHHHHHHHhCCCeEEEEcCC
Confidence 3689999973 3333 55888899999999887543
No 362
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=24.12 E-value=64 Score=32.14 Aligned_cols=20 Identities=20% Similarity=0.150 Sum_probs=18.0
Q ss_pred hhhHHHHHhCCCeEEEEeec
Q 007224 108 GGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 108 ~~La~~L~~~Gh~V~vit~~ 127 (612)
..+|+++.++|++|++++..
T Consensus 69 ~aiAe~~~~~Ga~V~lv~g~ 88 (313)
T 1p9o_A 69 ATSAEAFLAAGYGVLFLYRA 88 (313)
T ss_dssp HHHHHHHHHTTCEEEEEEET
T ss_pred HHHHHHHHHCCCEEEEEecC
Confidence 66899999999999999875
No 363
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=24.12 E-value=58 Score=32.53 Aligned_cols=25 Identities=36% Similarity=0.340 Sum_probs=19.1
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|++| ..+++.|.++||+|.++...
T Consensus 10 tG~iG---~~l~~~L~~~g~~V~~~~r~ 34 (372)
T 1db3_A 10 TGQDG---SYLAEFLLEKGYEVHGIKRR 34 (372)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEECC-
T ss_pred CChHH---HHHHHHHHHCCCEEEEEECC
Confidence 46777 56778899999999988654
No 364
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=24.02 E-value=50 Score=30.82 Aligned_cols=25 Identities=20% Similarity=0.315 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++..+
T Consensus 14 sggiG---~~~a~~l~~~G~~V~~~~~r 38 (247)
T 2hq1_A 14 SRGLG---KAIAWKLGNMGANIVLNGSP 38 (247)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEECT
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcCc
Confidence 47777 56888899999999888543
No 365
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=23.99 E-value=2.1e+02 Score=23.21 Aligned_cols=108 Identities=13% Similarity=0.081 Sum_probs=63.3
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-C--CCcHHHHHHHHc---CCce
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-E--PCGLIQLHAMRY---GTVP 504 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E--~~gl~~lEAma~---G~Pv 504 (612)
.+++|+.+.. .....++++..+.+-.+. .--+...+-..+. ..|++++-... + .-|+.+++.+.. .+|+
T Consensus 7 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~i 83 (136)
T 3kto_A 7 PIIYLVDHQK-DARAALSKLLSPLDVTIQ--CFASAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPT 83 (136)
T ss_dssp CEEEEECSCH-HHHHHHHHHHTTSSSEEE--EESSHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCE
T ss_pred CeEEEEcCCH-HHHHHHHHHHHHCCcEEE--EeCCHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCE
Confidence 4666776544 344555555544442222 1123333322222 35777764443 3 456666666653 6777
Q ss_pred EEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 505 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|.-.... ..+.+..|..+|+. .|.+.+++.++|.+++..
T Consensus 84 i~~s~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~l~~~i~~~~~~ 126 (136)
T 3kto_A 84 IVMASSSDIPTAVRAMRASAADFIE----------KPFIEHVLVHDVQQIING 126 (136)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEE----------SSBCHHHHHHHHHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHcChHHhee----------CCCCHHHHHHHHHHHHhc
Confidence 7654322 23445568889987 999999999999999986
No 366
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=23.91 E-value=62 Score=32.56 Aligned_cols=25 Identities=32% Similarity=0.323 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|++| ..|+..|.++||+|.++...
T Consensus 37 tG~IG---~~l~~~L~~~g~~V~~~~r~ 61 (381)
T 1n7h_A 37 TGQDG---SYLTEFLLGKGYEVHGLIRR 61 (381)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEECC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEecC
Confidence 47777 55778899999999988754
No 367
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=23.91 E-value=69 Score=30.34 Aligned_cols=25 Identities=32% Similarity=0.465 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 18 s~giG---~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 18 SRGIG---YGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57887 56788899999999887643
No 368
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=23.88 E-value=39 Score=32.55 Aligned_cols=33 Identities=24% Similarity=0.426 Sum_probs=24.8
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.|||++++. +|++| ..|++.|.++||+|.++..
T Consensus 12 ~~~vlVtGa-------tG~iG---~~l~~~L~~~g~~V~~~~r 44 (292)
T 1vl0_A 12 HMKILITGA-------NGQLG---REIQKQLKGKNVEVIPTDV 44 (292)
T ss_dssp CEEEEEEST-------TSHHH---HHHHHHHTTSSEEEEEECT
T ss_pred cceEEEECC-------CChHH---HHHHHHHHhCCCeEEeccC
Confidence 578877654 46676 5577889999999988754
No 369
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=23.86 E-value=4.4e+02 Score=26.14 Aligned_cols=84 Identities=8% Similarity=0.058 Sum_probs=54.4
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc----hhHHHHHHHHHHHCCCceEEEec
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
.+++..|-- +...|.|+|-+ ..=..-++.++.++ ++++.++++.. +.+.+..++.+.+.+..+...-
T Consensus 147 Ti~e~~g~l---~glkva~vGD~--~rva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g~~v~~~~- 217 (323)
T 3gd5_A 147 TIRENFGRL---AGLKLAYVGDG--NNVAHSLLLGCAKV---GMSIAVATPEGFTPDPAVSARASEIAGRTGAEVQILR- 217 (323)
T ss_dssp HHHHHHSCC---TTCEEEEESCC--CHHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHTCCEEEES-
T ss_pred HHHHHhCCC---CCCEEEEECCC--CcHHHHHHHHHHHc---CCEEEEECCCcccCCHHHHHHHHHHHHHcCCeEEEEC-
Confidence 456666631 34689999987 33356677777777 78999999843 3344555555556664454331
Q ss_pred cChHHHHHHHHhcCEEEeCCC
Q 007224 466 FNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~ 486 (612)
.+.+.++.||++.....
T Consensus 218 ----d~~eav~~aDvvyt~~w 234 (323)
T 3gd5_A 218 ----DPFEAARGAHILYTDVW 234 (323)
T ss_dssp ----CHHHHHTTCSEEEECCC
T ss_pred ----CHHHHhcCCCEEEEece
Confidence 13357899999987754
No 370
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=23.76 E-value=43 Score=32.80 Aligned_cols=32 Identities=38% Similarity=0.492 Sum_probs=23.8
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhC-----C-CeEEEEee
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-----G-HRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~-----G-h~V~vit~ 126 (612)
+|||++|+. |.+| ..++..|++. | |+|+++..
T Consensus 8 ~m~I~iiG~--------G~mG---~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGL--------GGVG---GYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECC--------SHHH---HHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECc--------CHHH---HHHHHHHHhCccccCCCCCEEEEEc
Confidence 489999973 5555 3467778888 9 99998864
No 371
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=23.69 E-value=43 Score=33.06 Aligned_cols=36 Identities=25% Similarity=0.407 Sum_probs=25.9
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCC-------CeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-------HRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-------h~V~vit~~ 127 (612)
+.+|+|++++. .|++| ..|+..|.++| |+|.++...
T Consensus 12 ~~~~~vlVtGa-------~G~iG---~~l~~~L~~~g~~~~r~~~~V~~~~r~ 54 (342)
T 2hrz_A 12 FQGMHIAIIGA-------AGMVG---RKLTQRLVKDGSLGGKPVEKFTLIDVF 54 (342)
T ss_dssp CSCEEEEEETT-------TSHHH---HHHHHHHHHHCEETTEEEEEEEEEESS
T ss_pred ccCCEEEEECC-------CcHHH---HHHHHHHHhcCCcccCCCceEEEEEcc
Confidence 45688776653 47777 45778899999 788887654
No 372
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=23.64 E-value=2.9e+02 Score=22.32 Aligned_cols=108 Identities=13% Similarity=0.142 Sum_probs=63.2
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCceE
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPI 505 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~PvI 505 (612)
..+++|+.+.. .....+++...+.+-.+. ..-+...+...+. ..|++++-. . +.-|+.+++.+. ..+|+|
T Consensus 4 ~~~iLivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~l~~~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii 79 (142)
T 2qxy_A 4 TPTVMVVDESR-ITFLAVKNALEKDGFNVI--WAKNEQEAFTFLRREKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVA 79 (142)
T ss_dssp CCEEEEECSCH-HHHHHHHHHHGGGTCEEE--EESSHHHHHHHHTTSCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEE
T ss_pred CCeEEEEeCCH-HHHHHHHHHHHhCCCEEE--EECCHHHHHHHHhccCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEE
Confidence 34667776544 344555555554443232 2224444444443 357877755 3 224555555553 357777
Q ss_pred EcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 506 VASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 506 ~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.-.... ..+.+..|..+++. .|.+.+++.+.|.+++..
T Consensus 80 ~ls~~~~~~~~~~~~~~g~~~~l~----------kP~~~~~l~~~i~~~~~~ 121 (142)
T 2qxy_A 80 VLSAYVDKDLIINSVKAGAVDYIL----------KPFRLDYLLERVKKIISS 121 (142)
T ss_dssp EEESCCCHHHHHHHHHHTCSCEEE----------SSCCHHHHHHHHHHHHHC
T ss_pred EEECCCCHHHHHHHHHCCcceeEe----------CCCCHHHHHHHHHHHHhh
Confidence 653322 22344557788887 899999999999999975
No 373
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=23.64 E-value=63 Score=30.93 Aligned_cols=33 Identities=15% Similarity=0.337 Sum_probs=23.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 7 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 39 (278)
T 1spx_A 7 KVAIITGS------SNGIG---RATAVLFAREGAKVTITGRH 39 (278)
T ss_dssp CEEEETTT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45566532 57777 56788899999999887643
No 374
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=23.64 E-value=66 Score=30.70 Aligned_cols=25 Identities=16% Similarity=0.469 Sum_probs=20.1
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 17 s~gIG---~~ia~~l~~~G~~V~~~~r~ 41 (264)
T 2dtx_A 17 SMGIG---RAIAERFVDEGSKVIDLSIH 41 (264)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEecC
Confidence 57887 56788899999999887644
No 375
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=23.49 E-value=47 Score=32.85 Aligned_cols=31 Identities=26% Similarity=0.506 Sum_probs=23.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++|+. |..| ..++..|++.||+|+++..
T Consensus 1 m~I~iiG~--------G~mG---~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGA--------GAMG---SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESC--------CHHH---HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECc--------CHHH---HHHHHHHHhCCCeEEEEEc
Confidence 78888863 4444 4567888999999999865
No 376
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=23.47 E-value=73 Score=30.43 Aligned_cols=25 Identities=12% Similarity=0.057 Sum_probs=19.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 40 sggIG---~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 40 GHGIG---RLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEEcC
Confidence 57777 56888899999999887643
No 377
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=23.46 E-value=3.6e+02 Score=25.09 Aligned_cols=85 Identities=12% Similarity=0.077 Sum_probs=51.3
Q ss_pred HHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhcCEEEeCCCCCCCcHHHHH
Q 007224 419 DILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFILIPSRFEPCGLIQLH 496 (612)
Q Consensus 419 d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~-~~l~~adi~l~pS~~E~~gl~~lE 496 (612)
+.+++.++.+.+-.+.++-+......-.+.++++.++++.-....+.. ..+.+. .+-.+||+++.|...+ -++-.
T Consensus 29 ~~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~l~vgaGtvl~~d~~~~A~~aGAd~v~~p~~d~---~v~~~ 105 (224)
T 1vhc_A 29 DDILPLADTLAKNGLSVAEITFRSEAAADAIRLLRANRPDFLIAAGTVLTAEQVVLAKSSGADFVVTPGLNP---KIVKL 105 (224)
T ss_dssp GGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTCEEEEESCCSHHHHHHHHHHTCSEEECSSCCH---HHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEeccCchHHHHHHHHHHhCcCcEEeeCcEeeHHHHHHHHHCCCCEEEECCCCH---HHHHH
Confidence 334555555555566777666655556778888999987645444433 344443 4667899999885421 12334
Q ss_pred HHHcCCceEE
Q 007224 497 AMRYGTVPIV 506 (612)
Q Consensus 497 Ama~G~PvI~ 506 (612)
+-.+|.|+|.
T Consensus 106 ar~~g~~~i~ 115 (224)
T 1vhc_A 106 CQDLNFPITP 115 (224)
T ss_dssp HHHTTCCEEC
T ss_pred HHHhCCCEEe
Confidence 4556666654
No 378
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=23.43 E-value=52 Score=30.35 Aligned_cols=33 Identities=24% Similarity=0.548 Sum_probs=24.1
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||.+|.. |-.| ..++..|++.||+|+++...
T Consensus 19 ~~~I~iiG~--------G~mG---~~la~~l~~~g~~V~~~~~~ 51 (209)
T 2raf_A 19 GMEITIFGK--------GNMG---QAIGHNFEIAGHEVTYYGSK 51 (209)
T ss_dssp -CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECTT
T ss_pred CCEEEEECC--------CHHH---HHHHHHHHHCCCEEEEEcCC
Confidence 689999862 3333 55788899999999987543
No 379
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=23.36 E-value=71 Score=30.39 Aligned_cols=25 Identities=28% Similarity=0.411 Sum_probs=19.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 22 s~gIG---~~ia~~l~~~G~~V~~~~r~ 46 (267)
T 1iy8_A 22 GSGLG---RATAVRLAAEGAKLSLVDVS 46 (267)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56788899999999887643
No 380
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=23.32 E-value=48 Score=35.27 Aligned_cols=35 Identities=14% Similarity=0.167 Sum_probs=25.7
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|..|||.+|+. | .+=..|+..|++.||+|.++-..
T Consensus 2 ~~~~kIgiIGl--------G---~MG~~lA~~L~~~G~~V~v~dr~ 36 (484)
T 4gwg_A 2 NAQADIALIGL--------A---VMGQNLILNMNDHGFVVCAFNRT 36 (484)
T ss_dssp -CCBSEEEECC--------S---HHHHHHHHHHHHTTCCEEEECSS
T ss_pred CCCCEEEEECh--------h---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 45689999963 3 23356899999999999987543
No 381
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=23.30 E-value=67 Score=30.22 Aligned_cols=24 Identities=17% Similarity=0.322 Sum_probs=18.2
Q ss_pred cccHHHHhhhhHHHHHhCCCe-EEEEee
Q 007224 100 TGGLGDVLGGLPPALAANGHR-VMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~-V~vit~ 126 (612)
.||+| ..+++.|+++|++ |.++..
T Consensus 14 s~gIG---~~~a~~l~~~G~~~v~~~~r 38 (254)
T 1sby_A 14 LGGIG---LDTSRELVKRNLKNFVILDR 38 (254)
T ss_dssp TSHHH---HHHHHHHHHTCCSEEEEEES
T ss_pred CChHH---HHHHHHHHHCCCcEEEEEec
Confidence 47777 5688889999997 666543
No 382
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=23.23 E-value=72 Score=30.72 Aligned_cols=25 Identities=28% Similarity=0.397 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 37 sggIG---~~la~~l~~~G~~V~~~~r~ 61 (286)
T 1xu9_A 37 SKGIG---REMAYHLAKMGAHVVVTARS 61 (286)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 57777 56788899999998887644
No 383
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=23.21 E-value=1.7e+02 Score=27.71 Aligned_cols=113 Identities=11% Similarity=0.033 Sum_probs=62.4
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEec-cChHH-HHHHHHhcCEE-EeCCCCCCC-cHHHHHHHHc---CCce
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAK-FNIPL-AHMIIAGADFI-LIPSRFEPC-GLIQLHAMRY---GTVP 504 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~-~~~~~-~~~~l~~adi~-l~pS~~E~~-gl~~lEAma~---G~Pv 504 (612)
..+|++.+.-.+ .+-+...+++ +....+ .+..+ ...+=.++|++ ++|. +.. |...+.++.. .+|+
T Consensus 106 GA~fIvsP~~~~----~vi~~~~~~g--i~~ipGv~TptEi~~A~~~Gad~vK~FPa--~~~gG~~~lkal~~p~p~ip~ 177 (232)
T 4e38_A 106 GATFVVSPGFNP----NTVRACQEIG--IDIVPGVNNPSTVEAALEMGLTTLKFFPA--EASGGISMVKSLVGPYGDIRL 177 (232)
T ss_dssp TCSEEECSSCCH----HHHHHHHHHT--CEEECEECSHHHHHHHHHTTCCEEEECST--TTTTHHHHHHHHHTTCTTCEE
T ss_pred CCCEEEeCCCCH----HHHHHHHHcC--CCEEcCCCCHHHHHHHHHcCCCEEEECcC--ccccCHHHHHHHHHHhcCCCe
Confidence 567777654332 2223344444 333322 34444 44455678876 5554 566 6888988875 4667
Q ss_pred EEcC---CCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 505 IVAS---TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 505 I~s~---~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
+++- ...+.+.+..|..+...|+.-.+-+++...|.+++.+..+++++
T Consensus 178 ~ptGGI~~~n~~~~l~aGa~~~vgGs~l~~~~~i~~~~~~~i~~~a~~~~~ 228 (232)
T 4e38_A 178 MPTGGITPSNIDNYLAIPQVLACGGTWMVDKKLVTNGEWDEIARLTREIVE 228 (232)
T ss_dssp EEBSSCCTTTHHHHHTSTTBCCEEECGGGCHHHHHTTCHHHHHHHHHHHHH
T ss_pred eeEcCCCHHHHHHHHHCCCeEEEECchhcChHHhhcCCHHHHHHHHHHHHH
Confidence 7653 12244566556556555665544444556676666666555544
No 384
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=23.18 E-value=85 Score=30.63 Aligned_cols=41 Identities=22% Similarity=0.312 Sum_probs=31.1
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.++|++.|+.. .| .-|-......||..|++.|.+|.+|-..
T Consensus 90 ~~~kvI~vts~-kg---G~GKTtva~nLA~~lA~~G~rVLLID~D 130 (286)
T 3la6_A 90 AQNNVLMMTGV-SP---SIGMTFVCANLAAVISQTNKRVLLIDCD 130 (286)
T ss_dssp TTCCEEEEEES-SS---SSSHHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred CCCeEEEEECC-CC---CCcHHHHHHHHHHHHHhCCCCEEEEecc
Confidence 35677777654 12 3477888889999999999999999654
No 385
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=23.16 E-value=3e+02 Score=22.20 Aligned_cols=110 Identities=4% Similarity=0.034 Sum_probs=62.3
Q ss_pred CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH---hcCEEEeCCCC-CCCcHHHHHHHHc---CCc
Q 007224 431 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---GADFILIPSRF-EPCGLIQLHAMRY---GTV 503 (612)
Q Consensus 431 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~---~adi~l~pS~~-E~~gl~~lEAma~---G~P 503 (612)
+..+++|+.+.. .....+++.....+-.+. ..-+...+...+. ..|++++-... +.-|+.+++.+.. .+|
T Consensus 14 ~~~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~~dlvilD~~l~~~~g~~~~~~l~~~~~~~~ 90 (138)
T 2b4a_A 14 QPFRVTLVEDEP-SHATLIQYHLNQLGAEVT--VHPSGSAFFQHRSQLSTCDLLIVSDQLVDLSIFSLLDIVKEQTKQPS 90 (138)
T ss_dssp CCCEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHTGGGGGSCSEEEEETTCTTSCHHHHHHHHTTSSSCCE
T ss_pred CCCeEEEECCCH-HHHHHHHHHHHHcCCEEE--EeCCHHHHHHHHHhCCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCC
Confidence 466777777654 344455555444442222 2223444434443 36888875544 3457777777753 567
Q ss_pred eEEcC-CCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 504 PIVAS-TGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~-~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|.-. ...-.+...--..+++. .|.+.+++...|.+++..
T Consensus 91 ii~ls~~~~~~~~~~~~~~~~l~----------KP~~~~~L~~~i~~~~~~ 131 (138)
T 2b4a_A 91 VLILTTGRHELIESSEHNLSYLQ----------KPFAISELRAAIDYHKPS 131 (138)
T ss_dssp EEEEESCC--CCCCSSSCEEEEE----------SSCCHHHHHHHHHHTCCC
T ss_pred EEEEECCCCCHHHHHHHHHheee----------CCCCHHHHHHHHHHHHHh
Confidence 66543 22211111111567776 899999999999888765
No 386
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=23.13 E-value=44 Score=35.49 Aligned_cols=36 Identities=19% Similarity=0.172 Sum_probs=25.3
Q ss_pred cCCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 81 CGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 81 ~~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|.+|||.+|+. |-.| ..|+..|+++||+|+++...
T Consensus 12 ~~~~~~IgvIGl--------G~MG---~~lA~~La~~G~~V~v~~r~ 47 (480)
T 2zyd_A 12 HMSKQQIGVVGM--------AVMG---RNLALNIESRGYTVSIFNRS 47 (480)
T ss_dssp ---CBSEEEECC--------SHHH---HHHHHHHHTTTCCEEEECSS
T ss_pred ccCCCeEEEEcc--------HHHH---HHHHHHHHhCCCeEEEEeCC
Confidence 477899999963 3333 56889999999999887543
No 387
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=23.11 E-value=53 Score=30.75 Aligned_cols=25 Identities=24% Similarity=0.417 Sum_probs=19.7
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 15 sggiG---~~~a~~l~~~G~~V~~~~r~ 39 (251)
T 1zk4_A 15 TLGIG---LAIATKFVEEGAKVMITGRH 39 (251)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 46777 56888899999999887643
No 388
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=23.06 E-value=3.3e+02 Score=25.25 Aligned_cols=107 Identities=14% Similarity=0.076 Sum_probs=59.7
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc--CCceEEc
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY--GTVPIVA 507 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~--G~PvI~s 507 (612)
.+++|+.+.. .....++.+....+..+. ..-+...+-..+. ..|++|+-... +.-|+.+++.+.. .+|+|.-
T Consensus 38 ~~ILivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~DlvllD~~lp~~~G~~l~~~lr~~~~~~iI~l 114 (249)
T 3q9s_A 38 QRILVIEDDH-DIANVLRMDLTDAGYVVD--HADSAMNGLIKAREDHPDLILLDLGLPDFDGGDVVQRLRKNSALPIIVL 114 (249)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHTTTCEEE--EESSHHHHHHHHHHSCCSEEEEECCSCHHHHHHHHHHHHTTCCCCEEEE
T ss_pred CEEEEEECCH-HHHHHHHHHHHHCCCEEE--EeCCHHHHHHHHhcCCCCEEEEcCCCCCCCHHHHHHHHHcCCCCCEEEE
Confidence 4666666543 234444444444432121 1223333333333 35777764433 2345556655543 4666665
Q ss_pred CCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 508 STGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 508 ~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
.... ..+.+..|..||+. .|.+.++|..+|..++.
T Consensus 115 t~~~~~~~~~~a~~~Ga~~yl~----------Kp~~~~~L~~~i~~~l~ 153 (249)
T 3q9s_A 115 TARDTVEEKVRLLGLGADDYLI----------KPFHPDELLARVKVQLR 153 (249)
T ss_dssp ESCCSHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHC
T ss_pred ECCCCHHHHHHHHHCCCcEEEE----------CCCCHHHHHHHHHHHHh
Confidence 4332 22344567889987 99999999999999886
No 389
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=23.05 E-value=71 Score=29.37 Aligned_cols=40 Identities=18% Similarity=0.054 Sum_probs=27.5
Q ss_pred ceEEEEeccccCccccccH-HHHhhhhHHHHHhC--CCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGL-GDVLGGLPPALAAN--GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~-~~~~~~La~~L~~~--Gh~V~vit~~ 127 (612)
|||++|... |. ..+|. ...+..+...+.+. |++|.++-..
T Consensus 2 mkiLii~gS--pr-~~~s~t~~l~~~~~~~~~~~~~g~~v~~~dL~ 44 (212)
T 3r6w_A 2 SRILAVHAS--PR-GERSQSRRLAEVFLAAYREAHPQARVARREVG 44 (212)
T ss_dssp CCEEEEECC--SC-STTCHHHHHHHHHHHHHHHHCTTCCEEEEESS
T ss_pred CEEEEEEeC--CC-CCCCHHHHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 899999975 53 11344 44555577777777 9999998654
No 390
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=23.05 E-value=60 Score=31.93 Aligned_cols=33 Identities=21% Similarity=0.343 Sum_probs=23.9
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhC-CCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~-Gh~V~vit~~ 127 (612)
|||++++. +|++| ..+++.|.++ ||+|.+++..
T Consensus 1 m~vlVtGa-------tG~iG---~~l~~~L~~~~g~~V~~~~r~ 34 (345)
T 2bll_A 1 MRVLILGV-------NGFIG---NHLTERLLREDHYEVYGLDIG 34 (345)
T ss_dssp CEEEEETC-------SSHHH---HHHHHHHHHSTTCEEEEEESC
T ss_pred CeEEEECC-------CcHHH---HHHHHHHHHhCCCEEEEEeCC
Confidence 67766543 46666 5577788888 8999988754
No 391
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=23.04 E-value=61 Score=31.34 Aligned_cols=34 Identities=21% Similarity=0.195 Sum_probs=25.5
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|+++|+.- .||+| ..+++.|+++|++|.+++..
T Consensus 12 ~k~vlITGa------s~GIG---~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 12 RRCAVVTGG------NKGIG---FEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp CCEEEESSC------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcEEEEecC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 466777643 57777 56888899999999888654
No 392
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=23.01 E-value=56 Score=31.68 Aligned_cols=32 Identities=22% Similarity=0.348 Sum_probs=24.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||.+|+. |-.| ..++..|++.||+|+++...
T Consensus 2 ~~i~iIG~--------G~mG---~~~a~~l~~~G~~V~~~dr~ 33 (287)
T 3pef_A 2 QKFGFIGL--------GIMG---SAMAKNLVKAGCSVTIWNRS 33 (287)
T ss_dssp CEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEEee--------cHHH---HHHHHHHHHCCCeEEEEcCC
Confidence 78999863 4333 55788899999999877543
No 393
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=22.99 E-value=2.7e+02 Score=21.63 Aligned_cols=107 Identities=12% Similarity=0.194 Sum_probs=60.1
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHH--HhcCEEEeCCCC-CCCcHHHHHHHH--cCCceEEcC
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMII--AGADFILIPSRF-EPCGLIQLHAMR--YGTVPIVAS 508 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l--~~adi~l~pS~~-E~~gl~~lEAma--~G~PvI~s~ 508 (612)
+++|+.+.. .....+++.....+..+. ...+....-..+ ...|++++-... +.-|+.+++.+. ..+|+|.-.
T Consensus 3 ~ilivdd~~-~~~~~l~~~l~~~~~~v~--~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s 79 (121)
T 1zh2_A 3 NVLIVEDEQ-AIRRFLRTALEGDGMRVF--EAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLS 79 (121)
T ss_dssp EEEEECSCH-HHHHHHHHHHHTTTCEEE--EESSHHHHHHHHHHHCCSEEEEESEETTEEHHHHHHHHHTTCCCCEEEEE
T ss_pred EEEEEeCCH-HHHHHHHHHHhcCCCEEE--EeCCHHHHHHHHhcCCCCEEEEeCCCCCCcHHHHHHHHHhCCCCcEEEEE
Confidence 456666544 344555555544442222 222333322222 246887764332 235666777665 356666543
Q ss_pred C-CC---cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 509 T-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 509 ~-gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
. .. ..+.+..|..+++. .|.+.+++...+.+++..
T Consensus 80 ~~~~~~~~~~~~~~g~~~~l~----------Kp~~~~~l~~~i~~~~~~ 118 (121)
T 1zh2_A 80 ARSEESDKIAALDAGADDYLS----------KPFGIGELQARLRVALRR 118 (121)
T ss_dssp SCCSHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCeEEe----------CCcCHHHHHHHHHHHHHh
Confidence 2 22 22344567789987 899999999999888763
No 394
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=22.90 E-value=76 Score=29.49 Aligned_cols=25 Identities=36% Similarity=0.585 Sum_probs=19.5
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 sggiG---~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 3d3w_A 16 GKGIG---RGTVQALHATGARVVAVSRT 40 (244)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56778899999999887643
No 395
>2cok_A Poly [ADP-ribose] polymerase-1; BRCT domain, DNA repair, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2le0_A
Probab=22.79 E-value=31 Score=28.94 Aligned_cols=67 Identities=13% Similarity=0.082 Sum_probs=42.7
Q ss_pred CCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHHHHcCCceEEcC
Q 007224 431 ENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVAS 508 (612)
Q Consensus 431 ~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEAma~G~PvI~s~ 508 (612)
.+..|+|.|+-.. -+.+++++.+.++.++...+ -...|++|.....|..|-.+-.|..+|+|||.-+
T Consensus 12 ~G~~~ViTG~l~~-~R~e~k~~ie~~Ggkv~~sV----------skkT~~lV~g~~~e~~gsKl~kA~~lgI~IvsE~ 78 (113)
T 2cok_A 12 SNMKILTLGKLSR-NKDEVKAMIEKLGGKLTGTA----------NKASLCISTKKEVEKMNKKMEEVKEANIRVVSED 78 (113)
T ss_dssp SSCEEEECSCCSS-CHHHHHHHHHHTTCEEESCS----------TTCSEEECCHHHHHHCCHHHHHHHHTTCCEECTH
T ss_pred CCCEEEEEecCCC-CHHHHHHHHHHCCCEEcCcc----------ccCccEEEECCCCCCCChHHHHHHHCCCcEEeHH
Confidence 3567788887543 46677777777775554332 2344555554222446778888999999888655
No 396
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=22.73 E-value=58 Score=31.80 Aligned_cols=32 Identities=25% Similarity=0.360 Sum_probs=23.9
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|++++. +|++| ..++++|.++||+|.+++..
T Consensus 13 ~ilVtGa-------tG~iG---~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIFGG-------TGYIG---NHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEETT-------TSTTH---HHHHHHHHHTTCCEEEEECT
T ss_pred eEEEECC-------CchHH---HHHHHHHHHCCCcEEEEECC
Confidence 6666654 47777 45778899999999988765
No 397
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=22.72 E-value=4.1e+02 Score=23.63 Aligned_cols=108 Identities=13% Similarity=0.150 Sum_probs=65.8
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCceEE
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPIV 506 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~PvI~ 506 (612)
.+++|+.+.+ .....++.+....+-.+. .-.+...+-..+. ..|++++-... +.-|+.+++.+. ..+|+|.
T Consensus 3 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~a~~~~~~~~~dlvllD~~l~~~~g~~~~~~lr~~~~~~~ii~ 79 (225)
T 1kgs_A 3 VRVLVVEDER-DLADLITEALKKEMFTVD--VCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLM 79 (225)
T ss_dssp CEEEEECSSH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEE
T ss_pred ceEEEEeCCH-HHHHHHHHHHHHCCCEEE--EECCHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEE
Confidence 4566776644 345555555554443232 2234444444443 35888875443 345777777664 3677776
Q ss_pred cCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 507 ASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-.... ..+.+..|..|++. .|.+.+++..+|..++..
T Consensus 80 ls~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~l~~~i~~~~~~ 120 (225)
T 1kgs_A 80 LTALSDVEYRVKGLNMGADDYLP----------KPFDLRELIARVRALIRR 120 (225)
T ss_dssp EESSCHHHHHHHTCCCCCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHhCCccEEEe----------CCCCHHHHHHHHHHHHhh
Confidence 54322 23455567889987 899999999999998863
No 398
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=22.72 E-value=1e+02 Score=29.61 Aligned_cols=33 Identities=18% Similarity=0.329 Sum_probs=24.2
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 30 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 62 (283)
T 1g0o_A 30 KVALVTGA------GRGIG---REMAMELGRRGCKVIVNYAN 62 (283)
T ss_dssp CEEEETTT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCC------CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 55666532 57777 56888899999999887654
No 399
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=22.71 E-value=80 Score=29.83 Aligned_cols=34 Identities=18% Similarity=0.134 Sum_probs=25.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 7 ~k~vlVTGa------s~GIG---~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 7 NATVAVIGA------GDYIG---AEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp SCEEEEECC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 356666542 57777 57888999999999887654
No 400
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.69 E-value=57 Score=30.31 Aligned_cols=25 Identities=24% Similarity=0.432 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCC--CeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANG--HRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~G--h~V~vit~~ 127 (612)
.||+| ..+++.|+++| ++|.++...
T Consensus 12 sggiG---~~la~~l~~~g~~~~V~~~~r~ 38 (250)
T 1yo6_A 12 NRGIG---LGLVQQLVKDKNIRHIIATARD 38 (250)
T ss_dssp SSHHH---HHHHHHHHTCTTCCEEEEEESS
T ss_pred CchHH---HHHHHHHHhcCCCcEEEEEecC
Confidence 46777 56888899999 999888654
No 401
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=22.67 E-value=77 Score=29.70 Aligned_cols=34 Identities=26% Similarity=0.350 Sum_probs=25.0
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 9 ~k~vlITGa------s~giG---~~~a~~l~~~G~~V~~~~r~ 42 (253)
T 3qiv_A 9 NKVGIVTGS------GGGIG---QAYAEALAREGAAVVVADIN 42 (253)
T ss_dssp TCEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC------CChHH---HHHHHHHHHCCCEEEEEcCC
Confidence 356666643 57777 67889999999998887643
No 402
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=22.63 E-value=87 Score=28.09 Aligned_cols=39 Identities=13% Similarity=0.049 Sum_probs=31.5
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHh-CCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~ 127 (612)
.|||++|..+ + +|....++..++..+.+ .|++|.++-..
T Consensus 4 M~kiliiy~S--~---~GnT~~~a~~i~~~l~~~~g~~v~~~~l~ 43 (188)
T 2ark_A 4 MGKVLVIYDT--R---TGNTKKMAELVAEGARSLEGTEVRLKHVD 43 (188)
T ss_dssp CEEEEEEECC--S---SSHHHHHHHHHHHHHHTSTTEEEEEEETT
T ss_pred CCEEEEEEEC--C---CcHHHHHHHHHHHHHhhcCCCeEEEEEhh
Confidence 3689998754 3 68888888999999998 99999888654
No 403
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.61 E-value=67 Score=30.85 Aligned_cols=33 Identities=15% Similarity=0.277 Sum_probs=23.9
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 7 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 7 KTVIITGS------SNGIG---RTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp CEEEETTC------SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45666532 57777 55788899999999887643
No 404
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=22.60 E-value=88 Score=30.39 Aligned_cols=33 Identities=18% Similarity=0.114 Sum_probs=23.5
Q ss_pred eEEEEeccccCccccc--cHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTG--GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~G--G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .| |+| ..+++.|+++|++|.++...
T Consensus 31 k~vlVTGa------sg~~GIG---~~ia~~la~~G~~V~~~~r~ 65 (296)
T 3k31_A 31 KKGVIIGV------ANDKSLA---WGIAKAVCAQGAEVALTYLS 65 (296)
T ss_dssp CEEEEECC------CSTTSHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEEeC------CCCCCHH---HHHHHHHHHCCCEEEEEeCC
Confidence 56666532 33 777 56888999999998877644
No 405
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=22.59 E-value=60 Score=31.35 Aligned_cols=34 Identities=24% Similarity=0.460 Sum_probs=24.1
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCC-CeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG-HRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G-h~V~vit~~ 127 (612)
+|+|++++. +|++| ..+++.|.++| |+|.+++..
T Consensus 5 ~~~ilVtGa-------tG~iG---~~l~~~L~~~g~~~V~~~~R~ 39 (299)
T 2wm3_A 5 KKLVVVFGG-------TGAQG---GSVARTLLEDGTFKVRVVTRN 39 (299)
T ss_dssp CCEEEEETT-------TSHHH---HHHHHHHHHHCSSEEEEEESC
T ss_pred CCEEEEECC-------CchHH---HHHHHHHHhcCCceEEEEEcC
Confidence 356665543 47777 45677788888 999998764
No 406
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=22.49 E-value=47 Score=31.21 Aligned_cols=30 Identities=23% Similarity=0.159 Sum_probs=22.4
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEE
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vi 124 (612)
|+++|+.- .||+| ..+++.|+++|++|.++
T Consensus 2 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 2 VIALVTHA------RHFAG---PAAVEALTQDGYTVVCH 31 (244)
T ss_dssp CEEEESST------TSTTH---HHHHHHHHHTTCEEEEC
T ss_pred CEEEEECC------CChHH---HHHHHHHHHCCCEEEEe
Confidence 55666532 56777 56788899999999887
No 407
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=22.47 E-value=2.9e+02 Score=21.81 Aligned_cols=110 Identities=13% Similarity=0.189 Sum_probs=65.1
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc-----CCc
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY-----GTV 503 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~-----G~P 503 (612)
..+++|+.+.. .....++.+....+...... .-+....-..+. ..|++++-... +.-|..+++.+.. .+|
T Consensus 4 ~~~ilivdd~~-~~~~~l~~~l~~~~~~~v~~-~~~~~~a~~~~~~~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ 81 (128)
T 1jbe_A 4 ELKFLVVDDFS-TMRRIVRNLLKELGFNNVEE-AEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRAXXAMSALP 81 (128)
T ss_dssp TCCEEEECSCH-HHHHHHHHHHHHTTCCCEEE-ESSHHHHHHHHTTCCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCC
T ss_pred ccEEEEECCCH-HHHHHHHHHHHHcCCcEEEe-eCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCc
Confidence 45677777654 34555555555444211111 123344333443 35888765443 3467778887764 567
Q ss_pred eEEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 504 PIVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|...... ..+.+..|..+++. .|.+.+++.+.|.+++..
T Consensus 82 ii~~s~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~l~~~i~~~~~~ 125 (128)
T 1jbe_A 82 VLMVTAEAKKENIIAAAQAGASGYVV----------KPFTAATLEEKLNKIFEK 125 (128)
T ss_dssp EEEEESSCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEecCccHHHHHHHHHhCcCceee----------cCCCHHHHHHHHHHHHHH
Confidence 76543322 23345567889987 899999999999988763
No 408
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=22.43 E-value=87 Score=29.63 Aligned_cols=23 Identities=17% Similarity=0.225 Sum_probs=18.6
Q ss_pred cHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 102 GLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 102 G~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+| ..+++.|+++|++|.++...
T Consensus 34 GIG---~~~a~~l~~~G~~V~~~~r~ 56 (266)
T 3o38_A 34 GIG---STTARRALLEGADVVISDYH 56 (266)
T ss_dssp SHH---HHHHHHHHHTTCEEEEEESC
T ss_pred chH---HHHHHHHHHCCCEEEEecCC
Confidence 677 56888999999999887644
No 409
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=22.42 E-value=74 Score=30.43 Aligned_cols=33 Identities=18% Similarity=0.542 Sum_probs=25.0
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 17 k~vlVTGa------s~gIG---~aia~~l~~~G~~V~~~~r~ 49 (266)
T 3p19_A 17 KLVVITGA------SSGIG---EAIARRFSEEGHPLLLLARR 49 (266)
T ss_dssp CEEEEEST------TSHHH---HHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 56666643 57777 56888999999999888654
No 410
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=22.41 E-value=78 Score=29.76 Aligned_cols=25 Identities=40% Similarity=0.541 Sum_probs=20.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 s~gIG---~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 16 SSGIG---EATARALAAEGAAVAIAARR 40 (247)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEECC
Confidence 57888 56888899999999887643
No 411
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=22.36 E-value=61 Score=30.66 Aligned_cols=35 Identities=26% Similarity=0.324 Sum_probs=25.6
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCC---CeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANG---HRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~G---h~V~vit~~ 127 (612)
.||.++|+.- .||+| ..+++.|+++| ++|.++...
T Consensus 20 ~~k~vlITGa------sggIG---~~la~~L~~~G~~~~~V~~~~r~ 57 (267)
T 1sny_A 20 HMNSILITGC------NRGLG---LGLVKALLNLPQPPQHLFTTCRN 57 (267)
T ss_dssp CCSEEEESCC------SSHHH---HHHHHHHHTSSSCCSEEEEEESC
T ss_pred CCCEEEEECC------CCcHH---HHHHHHHHhcCCCCcEEEEEecC
Confidence 4556666532 57777 56888999999 999988755
No 412
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=22.35 E-value=78 Score=30.26 Aligned_cols=24 Identities=8% Similarity=0.079 Sum_probs=19.7
Q ss_pred ccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 101 GGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 101 GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
||+| ..+++.|+++|++|.++...
T Consensus 18 ~gIG---~~~a~~l~~~G~~V~~~~r~ 41 (275)
T 2pd4_A 18 KSIA---YGIAQSCFNQGATLAFTYLN 41 (275)
T ss_dssp TSHH---HHHHHHHHTTTCEEEEEESS
T ss_pred CcHH---HHHHHHHHHCCCEEEEEeCC
Confidence 7888 56888899999999887654
No 413
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=22.33 E-value=77 Score=30.55 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=24.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.|+++|+.- .||+| ..++..|+++|++|.++..
T Consensus 25 ~k~~lVTGa------s~GIG---~~ia~~la~~G~~V~~~~r 57 (281)
T 3v2h_A 25 TKTAVITGS------TSGIG---LAIARTLAKAGANIVLNGF 57 (281)
T ss_dssp TCEEEEETC------SSHHH---HHHHHHHHHTTCEEEEECC
T ss_pred CCEEEEeCC------CcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 356667643 57777 5688899999999988754
No 414
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=22.33 E-value=2.8e+02 Score=21.58 Aligned_cols=107 Identities=11% Similarity=0.165 Sum_probs=62.8
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCceEEc
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPIVA 507 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~PvI~s 507 (612)
+++|+.+.. .....+++.....+..+. .--+...+-..+. ..|++++=... +.-|+.+++.+. ..+|+|..
T Consensus 2 ~ilivdd~~-~~~~~l~~~l~~~g~~v~--~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~ 78 (121)
T 2pl1_A 2 RVLVVEDNA-LLRHHLKVQIQDAGHQVD--DAEDAKEADYYLNEHIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVL 78 (121)
T ss_dssp EEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEE
T ss_pred eEEEEeCcH-HHHHHHHHHHhhcCCEEE--EeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEE
Confidence 456666544 344555555554443232 2223444434444 35888774433 345777777765 35677654
Q ss_pred CC-CC---cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 508 ST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 508 ~~-gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.. .. ..+.+..|..+++. .|.+.+++...+.+++..
T Consensus 79 s~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~l~~~i~~~~~~ 118 (121)
T 2pl1_A 79 TARESWQDKVEVLSAGADDYVT----------KPFHIEEVMARMQALMRR 118 (121)
T ss_dssp ESCCCHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred ecCCCHHHHHHHHHcCccceEE----------CCCCHHHHHHHHHHHHHh
Confidence 33 22 23345567889987 899999999999888763
No 415
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=22.29 E-value=64 Score=30.27 Aligned_cols=25 Identities=24% Similarity=0.412 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 15 s~gIG---~~ia~~l~~~G~~V~~~~r~ 39 (246)
T 2ag5_A 15 AQGIG---QAAALAFAREGAKVIATDIN 39 (246)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEECC
Confidence 57777 56888899999999888643
No 416
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=22.28 E-value=76 Score=29.82 Aligned_cols=25 Identities=16% Similarity=0.345 Sum_probs=20.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (249)
T 2ew8_A 16 ANGIG---RAIAERFAVEGADIAIADLV 40 (249)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEcCC
Confidence 57777 56888899999999887644
No 417
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=22.25 E-value=78 Score=29.49 Aligned_cols=25 Identities=32% Similarity=0.517 Sum_probs=20.0
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 11 s~giG---~~~a~~l~~~G~~V~~~~r~ 35 (239)
T 2ekp_A 11 SRGIG---RAIAEALVARGYRVAIASRN 35 (239)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888899999999887654
No 418
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=22.22 E-value=45 Score=32.13 Aligned_cols=32 Identities=31% Similarity=0.484 Sum_probs=22.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++++. +|++| ..|++.|. +||+|.++...
T Consensus 1 m~ilVtGa-------tG~iG---~~l~~~L~-~g~~V~~~~r~ 32 (299)
T 1n2s_A 1 MNILLFGK-------TGQVG---WELQRSLA-PVGNLIALDVH 32 (299)
T ss_dssp CEEEEECT-------TSHHH---HHHHHHTT-TTSEEEEECTT
T ss_pred CeEEEECC-------CCHHH---HHHHHHhh-cCCeEEEeccc
Confidence 67776654 46666 45677788 79999988643
No 419
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=22.19 E-value=56 Score=30.97 Aligned_cols=25 Identities=28% Similarity=0.369 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 23 sggiG---~~la~~l~~~G~~V~~~~r~ 47 (266)
T 1xq1_A 23 TKGIG---HAIVEEFAGFGAVIHTCARN 47 (266)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56788899999999887643
No 420
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=22.18 E-value=97 Score=29.29 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=23.9
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 22 k~vlVTGa------s~gIG---~aia~~l~~~G~~V~~~~r~ 54 (253)
T 2nm0_A 22 RSVLVTGG------NRGIG---LAIARAFADAGDKVAITYRS 54 (253)
T ss_dssp CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45555532 57777 55888899999999887654
No 421
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=22.16 E-value=69 Score=30.49 Aligned_cols=34 Identities=21% Similarity=0.390 Sum_probs=25.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 28 ~k~vlVTGa------s~gIG---~aia~~l~~~G~~V~~~~r~ 61 (260)
T 3un1_A 28 QKVVVITGA------SQGIG---AGLVRAYRDRNYRVVATSRS 61 (260)
T ss_dssp CCEEEESSC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 356667643 57777 57888999999999888654
No 422
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=22.13 E-value=75 Score=29.76 Aligned_cols=34 Identities=21% Similarity=0.273 Sum_probs=25.2
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|+++|+.- .||+| ..+++.|+++|++|.++..+
T Consensus 7 ~k~vlITGa------s~gIG---~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 7 GKVALVTGA------SRGIG---RAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TCEEEETTC------SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECC------CChHH---HHHHHHHHHCCCeEEEEeCC
Confidence 366777643 46777 56888999999999887654
No 423
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=22.10 E-value=2.8e+02 Score=21.61 Aligned_cols=108 Identities=15% Similarity=0.188 Sum_probs=63.4
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH--cCCceEEc
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR--YGTVPIVA 507 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma--~G~PvI~s 507 (612)
.+++|+.+.. .....++......+..+. ..-+.......+. ..|++++-... +.-|+.+++.+. ..+|+|..
T Consensus 3 ~~ilivdd~~-~~~~~l~~~L~~~~~~v~--~~~~~~~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~ 79 (122)
T 1zgz_A 3 HHIVIVEDEP-VTQARLQSYFTQEGYTVS--VTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILV 79 (122)
T ss_dssp CEEEEECSSH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEE
T ss_pred cEEEEEECCH-HHHHHHHHHHHHCCCeEE--EecCHHHHHHHHhcCCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEE
Confidence 3566666544 344555555444443232 2224444444444 35888775443 335677777764 35666654
Q ss_pred CC-CC---cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 508 ST-GG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 508 ~~-gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.. .. ..+.++.|..+++. .|.+.+++...|.+++..
T Consensus 80 s~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~l~~~i~~~~~~ 119 (122)
T 1zgz_A 80 TGRSDRIDRIVGLEMGADDYVT----------KPLELRELVVRVKNLLWR 119 (122)
T ss_dssp ESSCCHHHHHHHHHHTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred ECCCChhhHHHHHHhCHHHHcc----------CCCCHHHHHHHHHHHHHH
Confidence 32 22 22344567889987 899999999999888753
No 424
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=22.03 E-value=3.5e+02 Score=25.27 Aligned_cols=103 Identities=16% Similarity=-0.004 Sum_probs=56.4
Q ss_pred HHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCCCCCCCcHHHHHH
Q 007224 418 SDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRFEPCGLIQLHA 497 (612)
Q Consensus 418 ~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~E~~gl~~lEA 497 (612)
...+++++.+.++..-++-++|-+. ....++.+..-++.++......+.++.... +.++
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~--~~~~~~~i~~ll~~~i~~~~~~~~ee~~~~-------------------i~~l 150 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQE--TIPALVAFQKTFNLRLDQRSYITEEDARGQ-------------------INEL 150 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESS--CCHHHHHHHHHHTCCEEEEEESSHHHHHHH-------------------HHHH
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCch--hhhHHHHHHHHhCCceEEEEeCCHHHHHHH-------------------HHHH
Confidence 3567788888876444777777765 334455555555555666665566555432 2233
Q ss_pred HHcCCceEEcCCCCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 498 MRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 498 ma~G~PvI~s~~gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
..-|+-+|+-+.....-.-+.|-.++++ . +.+++.+++++++.-
T Consensus 151 ~~~G~~vVVG~~~~~~~A~~~Gl~~vlI----------~--s~eSI~~Ai~eA~~l 194 (225)
T 2pju_A 151 KANGTEAVVGAGLITDLAEEAGMTGIFI----------Y--SAATVRQAFSDALDM 194 (225)
T ss_dssp HHTTCCEEEESHHHHHHHHHTTSEEEES----------S--CHHHHHHHHHHHHHH
T ss_pred HHCCCCEEECCHHHHHHHHHcCCcEEEE----------C--CHHHHHHHHHHHHHH
Confidence 4444444443321111111124455654 4 368888888888765
No 425
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=22.03 E-value=62 Score=32.31 Aligned_cols=36 Identities=17% Similarity=0.264 Sum_probs=25.0
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhC-CC-eEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GH-RVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~-Gh-~V~vit~~ 127 (612)
+++|+|++++. +|++| ..+++.|.++ |+ +|.+++..
T Consensus 19 ~~~k~vlVTGa-------tG~iG---~~l~~~L~~~~g~~~V~~~~r~ 56 (344)
T 2gn4_A 19 LDNQTILITGG-------TGSFG---KCFVRKVLDTTNAKKIIVYSRD 56 (344)
T ss_dssp TTTCEEEEETT-------TSHHH---HHHHHHHHHHCCCSEEEEEESC
T ss_pred hCCCEEEEECC-------CcHHH---HHHHHHHHhhCCCCEEEEEECC
Confidence 44567766543 47777 5577788888 97 88887653
No 426
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=21.98 E-value=2.9e+02 Score=21.68 Aligned_cols=107 Identities=17% Similarity=0.194 Sum_probs=62.1
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCceEE
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPIV 506 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~PvI~ 506 (612)
.+++|+.+.. .....++.+....+..+. ..-+...+-..+. ..|++++-... +.-|+.+++.+. ..+|+|.
T Consensus 4 ~~ilivdd~~-~~~~~l~~~l~~~~~~v~--~~~~~~~a~~~~~~~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 80 (124)
T 1srr_A 4 EKILIVDDQS-GIRILLNEVFNKEGYQTF--QAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII 80 (124)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHTTTCEEE--EESSHHHHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEE
T ss_pred ceEEEEeCCH-HHHHHHHHHHHHCCcEEE--EeCCHHHHHHHHhccCCCEEEEecCCCCCCHHHHHHHHHHhCCCCCEEE
Confidence 3566776544 345555555554442232 2224444333333 46888875443 335666666654 4677766
Q ss_pred cCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 507 ASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 507 s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
-.... ..+....|..+++. .|.+.+++.+.+.+++.
T Consensus 81 ~s~~~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~ 120 (124)
T 1srr_A 81 MTAYGELDMIQESKELGALTHFA----------KPFDIDEIRDAVKKYLP 120 (124)
T ss_dssp EESSCCHHHHHHHHHHTCCCEEE----------SSCCHHHHHHHHHHHSC
T ss_pred EEccCchHHHHHHHhcChHhhcc----------CCCCHHHHHHHHHHHhc
Confidence 54322 22344457788887 89999999999988764
No 427
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=21.93 E-value=79 Score=29.92 Aligned_cols=25 Identities=20% Similarity=0.506 Sum_probs=19.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 16 SSGIG---LAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEcCC
Confidence 57777 56888899999999887643
No 428
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=21.91 E-value=79 Score=29.72 Aligned_cols=33 Identities=18% Similarity=0.192 Sum_probs=23.9
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 3 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 35 (247)
T 3dii_A 3 RGVIVTGG------GHGIG---KQICLDFLEAGDKVCFIDID 35 (247)
T ss_dssp CEEEEEST------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45556532 57777 56888999999999887643
No 429
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=21.76 E-value=72 Score=30.71 Aligned_cols=23 Identities=26% Similarity=0.413 Sum_probs=18.5
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
.||+| ..++..|+++|++|.++.
T Consensus 53 sggIG---~~la~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 53 GRGIG---REIAKMLAKSVSHVICIS 75 (285)
T ss_dssp TSHHH---HHHHHHHTTTSSEEEEEE
T ss_pred CcHHH---HHHHHHHHHcCCEEEEEc
Confidence 57777 467888999999998854
No 430
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=21.74 E-value=58 Score=30.35 Aligned_cols=25 Identities=28% Similarity=0.504 Sum_probs=19.7
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 sggiG---~~la~~l~~~G~~V~~~~r~ 40 (248)
T 2pnf_A 16 TRGIG---RAIAEKLASAGSTVIITGTS 40 (248)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 55788899999999888643
No 431
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=21.63 E-value=1.4e+02 Score=29.69 Aligned_cols=46 Identities=9% Similarity=0.021 Sum_probs=31.8
Q ss_pred HHHHHHHHhcCEEEeCC--CCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 469 PLAHMIIAGADFILIPS--RFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS--~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
..+.++++.||++++.- ..|. ++-..+..|--|.-+|-+..|++.+
T Consensus 185 ~~l~ell~~aDiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRG~~vd 235 (315)
T 3pp8_A 185 EELRAFLNQTRVLINLLPNTAQTVGIINSELLDQLPDGAYVLNLARGVHVQ 235 (315)
T ss_dssp HHHHHHHHTCSEEEECCCCCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBC
T ss_pred CCHHHHHhhCCEEEEecCCchhhhhhccHHHHhhCCCCCEEEECCCChhhh
Confidence 45667999999988643 3233 3445677777788788777777654
No 432
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=21.62 E-value=3e+02 Score=21.65 Aligned_cols=107 Identities=19% Similarity=0.200 Sum_probs=63.6
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH--cCCceEEc
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR--YGTVPIVA 507 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma--~G~PvI~s 507 (612)
.+++|+.+.+ .....++....+.+-.+. ...+...+-..+. ..|++++-... +.-|+.+++.+. ..+|+|.-
T Consensus 3 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~ 79 (120)
T 3f6p_A 3 KKILVVDDEK-PIADILEFNLRKEGYEVH--CAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIML 79 (120)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EESSHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEE
T ss_pred CeEEEEECCH-HHHHHHHHHHHhCCEEEE--EeCCHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEE
Confidence 3566776544 344555555555443332 2234454444444 35777775443 345666666654 36777765
Q ss_pred CCCCc----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHH
Q 007224 508 STGGL----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALA 552 (612)
Q Consensus 508 ~~gg~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~ 552 (612)
....- .+.+..|..+|+. .|.+.+++...+.+++.
T Consensus 80 t~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~l~~~i~~~l~ 118 (120)
T 3f6p_A 80 TAKDSEIDKVIGLEIGADDYVT----------KPFSTRELLARVKANLR 118 (120)
T ss_dssp EESSCHHHHHHHHHTTCCEEEE----------ESCCHHHHHHHHHHHHT
T ss_pred ECCCChHHHHHHHhCCcceeEc----------CCCCHHHHHHHHHHHHh
Confidence 43222 2345568889987 89999999999988775
No 433
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=21.54 E-value=36 Score=34.49 Aligned_cols=43 Identities=14% Similarity=-0.096 Sum_probs=27.3
Q ss_pred CCCceEEEEeccccCccccccHH-HHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~-~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|++|||+++.....+. -.++ .....++++|.+.||+|..+-..
T Consensus 1 m~~~~v~vl~gg~s~E---~~vs~~s~~~v~~al~~~g~~v~~i~~~ 44 (364)
T 2i87_A 1 MTKENICIVFGGKSAE---HEVSILTAQNVLNAIDKDKYHVDIIYIT 44 (364)
T ss_dssp --CEEEEEEEECSSSC---HHHHHHHHHHHHHTSCTTTEEEEEEEEC
T ss_pred CCCcEEEEEECCCCcc---chhHHHHHHHHHHHHhhcCCEEEEEEEc
Confidence 4579999997432221 0111 23366888999999999998754
No 434
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=21.49 E-value=1.1e+02 Score=30.42 Aligned_cols=44 Identities=25% Similarity=0.276 Sum_probs=30.8
Q ss_pred HHHHHHhcCEEEeC--CCCCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILIP--SRFEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~p--S~~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++. ...+. ++-..++.|.-|.-+|-+..|++.+
T Consensus 192 l~ell~~aDvV~~~~p~t~~t~~li~~~~l~~mk~ga~lin~srg~~vd 240 (331)
T 1xdw_A 192 LDEVLEKSDIITIHAPYIKENGAVVTRDFLKKMKDGAILVNCARGQLVD 240 (331)
T ss_dssp HHHHHHHCSEEEECCCCCTTTCCSBCHHHHHTSCTTEEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEEecCCchHHHHHhCHHHHhhCCCCcEEEECCCccccc
Confidence 44688999999873 22233 3445788888888888888877654
No 435
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=21.46 E-value=72 Score=29.06 Aligned_cols=38 Identities=26% Similarity=0.384 Sum_probs=24.7
Q ss_pred ceEEEEeccccCccccccHH-HHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~-~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|||++|... |. .++.. ..+..+...+ +.|++|.++-..
T Consensus 1 MkiLiI~gs--pr--~~s~t~~l~~~~~~~~-~~g~~v~~~dL~ 39 (196)
T 3lcm_A 1 MKILIVYTH--PN--PTSFNAEILKQVQTNL-SKEHTVSTLDLY 39 (196)
T ss_dssp CEEEEEECC--SC--TTSHHHHHHHHHHHHS-CTTSEEEEEETT
T ss_pred CEEEEEEeC--CC--CCChHHHHHHHHHHHh-cCCCeEEEEEcc
Confidence 899999975 54 34433 3333344445 679999988654
No 436
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=21.41 E-value=85 Score=30.02 Aligned_cols=25 Identities=32% Similarity=0.598 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 41 sggIG---~~la~~l~~~G~~V~~~~r~ 65 (279)
T 1xg5_A 41 SGGIG---AAVARALVQQGLKVVGCART 65 (279)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CchHH---HHHHHHHHHCCCEEEEEECC
Confidence 57777 56788899999999887643
No 437
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=21.37 E-value=2.9e+02 Score=28.19 Aligned_cols=81 Identities=15% Similarity=0.169 Sum_probs=48.3
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc--------ChHHHHHHHHhcCEEEeC--CCCC----C---CcHHH
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF--------NIPLAHMIIAGADFILIP--SRFE----P---CGLIQ 494 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~--------~~~~~~~~l~~adi~l~p--S~~E----~---~gl~~ 494 (612)
+-.+-|+|-|. +-..+.+....++-++...-.. ....+.++++.||++++. ...| . ++-..
T Consensus 119 gktvGIIGlG~--IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~T~~li~~~~ 196 (381)
T 3oet_A 119 DRTIGIVGVGN--VGSRLQTRLEALGIRTLLCDPPRAARGDEGDFRTLDELVQEADVLTFHTPLYKDGPYKTLHLADETL 196 (381)
T ss_dssp GCEEEEECCSH--HHHHHHHHHHHTTCEEEEECHHHHHTTCCSCBCCHHHHHHHCSEEEECCCCCCSSTTCCTTSBCHHH
T ss_pred CCEEEEEeECH--HHHHHHHHHHHCCCEEEEECCChHHhccCcccCCHHHHHhhCCEEEEcCcCCccccccchhhcCHHH
Confidence 34566666665 4444444444444333332211 111245689999999863 3334 3 34568
Q ss_pred HHHHHcCCceEEcCCCCccc
Q 007224 495 LHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 495 lEAma~G~PvI~s~~gg~~e 514 (612)
++.|.-|.-+|-+..|++.+
T Consensus 197 l~~mk~gailIN~aRG~vvd 216 (381)
T 3oet_A 197 IRRLKPGAILINACRGPVVD 216 (381)
T ss_dssp HHHSCTTEEEEECSCGGGBC
T ss_pred HhcCCCCcEEEECCCCcccC
Confidence 88888899888888888665
No 438
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=21.36 E-value=73 Score=31.99 Aligned_cols=41 Identities=22% Similarity=0.220 Sum_probs=31.2
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.++|+|++++.. + +-|-.+....||.+|++.|++|.++...
T Consensus 13 ~~~~~i~~~sgk--G---GvGKTt~a~~lA~~la~~g~~vllid~D 53 (334)
T 3iqw_A 13 QRSLRWIFVGGK--G---GVGKTTTSCSLAIQLAKVRRSVLLLSTD 53 (334)
T ss_dssp CTTCCEEEEECS--T---TSSHHHHHHHHHHHHTTSSSCEEEEECC
T ss_pred CCCeEEEEEeCC--C---CccHHHHHHHHHHHHHhCCCcEEEEECC
Confidence 345789888753 1 2356667788999999999999999865
No 439
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=21.33 E-value=1.7e+02 Score=27.10 Aligned_cols=36 Identities=8% Similarity=0.062 Sum_probs=20.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhC--CCeEEEEeecCC
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN--GHRVMTIAPRYD 129 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~--Gh~V~vit~~~~ 129 (612)
|||+++.+. -|..+..|..++.+. +++|..+....+
T Consensus 1 ~riaVl~SG---------~Gs~L~aLi~~~~~~~~~~~I~~Vvs~~~ 38 (209)
T 1meo_A 1 ARVAVLISG---------TGSNLQALIDSTREPNSSAQIDIVISNKA 38 (209)
T ss_dssp CEEEEEESS---------SCTTHHHHHHHHHSTTCSCEEEEEEESST
T ss_pred CeEEEEEEC---------CchHHHHHHHHHhcCCCCcEEEEEEeCCC
Confidence 577777642 223455555555443 789877776533
No 440
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=21.31 E-value=63 Score=32.80 Aligned_cols=34 Identities=24% Similarity=0.168 Sum_probs=25.3
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|..++|++|+.. .+|+. +|..|+++|++|+|+=.
T Consensus 3 ~~~~~V~IVGaG------~aGl~-----~A~~L~~~G~~v~v~E~ 36 (397)
T 2vou_A 3 PTTDRIAVVGGS------ISGLT-----AALMLRDAGVDVDVYER 36 (397)
T ss_dssp CCCSEEEEECCS------HHHHH-----HHHHHHHTTCEEEEECS
T ss_pred CCCCcEEEECCC------HHHHH-----HHHHHHhCCCCEEEEec
Confidence 346789999753 24554 77889999999999954
No 441
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=21.26 E-value=3.5e+02 Score=22.29 Aligned_cols=110 Identities=15% Similarity=0.192 Sum_probs=65.3
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEE-eccChHHHHHHHHh--cCEEEeCCCC-CCCcHHHHHHHH---cCCce
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGV-AKFNIPLAHMIIAG--ADFILIPSRF-EPCGLIQLHAMR---YGTVP 504 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~-~~~~~~~~~~~l~~--adi~l~pS~~-E~~gl~~lEAma---~G~Pv 504 (612)
..+++|+.+.. .....++++..+..+ .... ...+...+...+.. .|++++-... +.-|+.+++.+. ..+|+
T Consensus 5 ~~~ILivdd~~-~~~~~l~~~L~~~~~-~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~i 82 (153)
T 3cz5_A 5 TARIMLVDDHP-IVREGYRRLIERRPG-YAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARI 82 (153)
T ss_dssp CEEEEEECSCH-HHHHHHHHHHTTSTT-EEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCE
T ss_pred ccEEEEECCcH-HHHHHHHHHHhhCCC-cEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeE
Confidence 45677777654 345555555544222 2222 22244444444443 5888875443 345666666654 36777
Q ss_pred EEcCCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 505 IVASTGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 505 I~s~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
|+..... ..+.+..|..+++. .|.+.+++.+.|.+++..
T Consensus 83 i~ls~~~~~~~~~~~~~~g~~~~l~----------kp~~~~~L~~~i~~~~~~ 125 (153)
T 3cz5_A 83 LIFTMHQGSAFALKAFEAGASGYVT----------KSSDPAELVQAIEAILAG 125 (153)
T ss_dssp EEEESCCSHHHHHHHHHTTCSEEEE----------TTSCTTHHHHHHHHHTTT
T ss_pred EEEECCCCHHHHHHHHHCCCcEEEe----------cCCCHHHHHHHHHHHHhC
Confidence 7654322 23344567889987 889999999999999875
No 442
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=21.24 E-value=37 Score=30.75 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=22.1
Q ss_pred CCceEEEEeccccCccccccHH-HHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLG-DVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~-~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.+|||++|..+ |. .+|.. .++..++..+. .|++|.++-.
T Consensus 5 ~~Mkilii~gS--~r--~~g~t~~la~~i~~~l~-~g~~v~~~dl 44 (193)
T 1rtt_A 5 DDIKVLGISGS--LR--SGSYNSAALQEAIGLVP-PGMSIELADI 44 (193)
T ss_dssp --CEEEEEESC--CS--TTCHHHHHHHHHHTTCC-TTCEEEECCC
T ss_pred CCceEEEEECC--CC--CCChHHHHHHHHHHhcc-CCCeEEEEeH
Confidence 46899999875 53 23433 33333444443 5888888754
No 443
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=21.18 E-value=57 Score=34.48 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=25.3
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|.+|||.+|+. |..| ..|+..|++.||+|.++..
T Consensus 3 m~~~~IgvIG~--------G~mG---~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGM--------AVMG---KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECC--------SHHH---HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEee--------HHHH---HHHHHHHHhCCCEEEEEcC
Confidence 55689999963 3333 5588889999999987754
No 444
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=21.15 E-value=46 Score=32.21 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=23.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 24 k~~lVTGa------s~gIG---~aia~~L~~~G~~V~~~~r~ 56 (288)
T 2x9g_A 24 PAAVVTGA------AKRIG---RAIAVKLHQTGYRVVIHYHN 56 (288)
T ss_dssp CEEEETTC------SSHHH---HHHHHHHHHHTCEEEEEESS
T ss_pred CEEEEeCC------CCHHH---HHHHHHHHHCCCeEEEEeCC
Confidence 45556532 57777 56788899999999887654
No 445
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=21.07 E-value=2.1e+02 Score=28.27 Aligned_cols=112 Identities=19% Similarity=0.151 Sum_probs=63.6
Q ss_pred eeCCCccCccCCCCccccccccCcchhhcchHHHHHHHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCc
Q 007224 354 IVNGMDVQEWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENV 433 (612)
Q Consensus 354 I~Ngvd~~~~~p~~~~~~~~~~~~~~~~~~~~~~k~~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~ 433 (612)
|.||.|.+.+.|.. -..+--.+++..|-- +...|.|+|-+....=..-++.++.++ +++
T Consensus 121 VINag~g~~~HPtQ----------------~LaDl~Ti~e~~g~l---~glkva~vGD~~~~rva~Sl~~~~~~~--~G~ 179 (306)
T 4ekn_B 121 IINAGDGSNQHPTQ----------------TLLDLYTIMREIGRI---DGIKIAFVGDLKYGRTVHSLVYALSLF--ENV 179 (306)
T ss_dssp EEESCSSSSCCHHH----------------HHHHHHHHHHHHSCS---TTCEEEEESCTTTCHHHHHHHHHHHTS--SSC
T ss_pred EEeCCCCCCcCcHH----------------HHHHHHHHHHHhCCc---CCCEEEEEcCCCCCcHHHHHHHHHHhc--CCC
Confidence 56887766665531 011223456666632 346899999765444456677777776 468
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHhcCEEEeCCCC-CCCc
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFILIPSRF-EPCG 491 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~adi~l~pS~~-E~~g 491 (612)
++.++++..-.....+.+...+.+..+.... + +.+.++.||++...... |.++
T Consensus 180 ~v~~~~P~~~~~~~~~~~~~~~~g~~~~~~~--d---~~eav~~aDvvy~~~~q~er~~ 233 (306)
T 4ekn_B 180 EMYFVSPKELRLPKDIIEDLKAKNIKFYEKE--S---LDDLDDDIDVLYVTRIQKERFP 233 (306)
T ss_dssp EEEEECCGGGCCCHHHHHHHHHTTCCEEEES--C---GGGCCTTCSEEEECCCCGGGCC
T ss_pred EEEEECCcccccCHHHHHHHHHcCCEEEEEc--C---HHHHhcCCCEEEeCCcccccCC
Confidence 9999997431112233333344554443321 1 22367899998876443 5554
No 446
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=21.07 E-value=70 Score=31.80 Aligned_cols=37 Identities=30% Similarity=0.490 Sum_probs=27.3
Q ss_pred CceEEEEeccccCccccccHH--HHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLG--DVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~--~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+-||+=|+. .||+| +.+-.|+.+|+++|++|.+|=..
T Consensus 47 ~aKVIAIaG-------KGGVGKTTtavNLA~aLA~~GkkVllID~D 85 (314)
T 3fwy_A 47 GAKVFAVYG-------KGGIGKSTTSSNLSAAFSILGKRVLQIGCD 85 (314)
T ss_dssp CCEEEEEEC-------STTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CceEEEEEC-------CCccCHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 457777752 46555 55667999999999999999543
No 447
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.05 E-value=58 Score=29.79 Aligned_cols=29 Identities=38% Similarity=0.563 Sum_probs=22.4
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vi 124 (612)
..|++|..- | .|+. +|..|+++|++|+|+
T Consensus 3 ~dV~IIGaG--p----aGL~-----aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 3 VPIAIIGTG--I----AGLS-----AAQALTAAGHQVHLF 31 (336)
T ss_dssp CCEEEECCS--H----HHHH-----HHHHHHHTTCCEEEE
T ss_pred CCEEEECcC--H----HHHH-----HHHHHHHCCCCEEEE
Confidence 358888753 3 4555 788899999999998
No 448
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=21.03 E-value=71 Score=33.83 Aligned_cols=32 Identities=28% Similarity=0.492 Sum_probs=24.5
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.|||++|+. |-+| ..++..|++.||+|+++-.
T Consensus 8 ~~~I~VIG~--------G~vG---~~lA~~la~~G~~V~~~d~ 39 (478)
T 2y0c_A 8 SMNLTIIGS--------GSVG---LVTGACLADIGHDVFCLDV 39 (478)
T ss_dssp CCEEEEECC--------SHHH---HHHHHHHHHTTCEEEEECS
T ss_pred CceEEEECc--------CHHH---HHHHHHHHhCCCEEEEEEC
Confidence 599999974 3333 3478889999999998854
No 449
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=21.02 E-value=87 Score=29.60 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=24.0
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 8 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (260)
T 2z1n_A 8 KLAVVTAG------SSGLG---FASALELARNGARLLLFSRN 40 (260)
T ss_dssp CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CchHH---HHHHHHHHHCCCEEEEEeCC
Confidence 55566532 57777 56888899999999887643
No 450
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=21.02 E-value=48 Score=32.09 Aligned_cols=31 Identities=26% Similarity=0.522 Sum_probs=22.1
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
+|||++|+. |.+| ..++..|++.||+|+++.
T Consensus 3 ~m~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 3 AMKLGFIGL--------GIMG---SPMAINLARAGHQLHVTT 33 (295)
T ss_dssp -CEEEECCC--------STTH---HHHHHHHHHTTCEEEECC
T ss_pred CCEEEEEcc--------CHHH---HHHHHHHHhCCCEEEEEc
Confidence 489999873 4344 346778889999997764
No 451
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=21.00 E-value=63 Score=32.86 Aligned_cols=35 Identities=23% Similarity=0.252 Sum_probs=25.9
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|..++|++|+.. ..|+. +|..|+++|++|+|+=..
T Consensus 24 ~~~~dV~IVGaG------~aGl~-----~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 24 LSDKNVAIIGGG------PVGLT-----MAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CTTCEEEEECCS------HHHHH-----HHHHHHTTTCEEEEEECS
T ss_pred cCCCCEEEECCC------HHHHH-----HHHHHHHCCCCEEEEeCC
Confidence 456789999753 24444 778899999999999543
No 452
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=20.99 E-value=70 Score=31.01 Aligned_cols=33 Identities=24% Similarity=0.417 Sum_probs=23.2
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
++|||++|+. |.+| ..++..|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~--------G~~G---~~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGL--------GAMG---KPMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECC--------CTTH---HHHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECc--------cHHH---HHHHHHHHHCCCeEEEEeC
Confidence 3589999973 4444 3467788899999987643
No 453
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=20.93 E-value=69 Score=29.63 Aligned_cols=25 Identities=40% Similarity=0.563 Sum_probs=19.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 11 sggiG---~~la~~l~~~G~~V~~~~r~ 35 (242)
T 1uay_A 11 ASGLG---RAAALALKARGYRVVVLDLR 35 (242)
T ss_dssp TSHHH---HHHHHHHHHHTCEEEEEESS
T ss_pred CChHH---HHHHHHHHHCCCEEEEEccC
Confidence 47777 56788899999999888654
No 454
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=20.89 E-value=60 Score=32.37 Aligned_cols=35 Identities=26% Similarity=0.268 Sum_probs=23.8
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|..+||.+|+. | .+=..++..|+++||+|+++-..
T Consensus 4 ~~~~kI~vIGa--------G---~MG~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGS--------G---LVGRSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECC--------S---HHHHHHHHHHHHTTCCEEEECSC
T ss_pred CCCceEEEEee--------C---HHHHHHHHHHHHCCCEEEEEeCC
Confidence 34467888863 2 23356888899999999998544
No 455
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=20.89 E-value=4.4e+02 Score=23.37 Aligned_cols=108 Identities=14% Similarity=0.099 Sum_probs=61.5
Q ss_pred CcEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH---------------hcCEEEeCCCC-CCCcHHHH
Q 007224 432 NVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA---------------GADFILIPSRF-EPCGLIQL 495 (612)
Q Consensus 432 ~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~---------------~adi~l~pS~~-E~~gl~~l 495 (612)
..+++|+.+.. .....++++..+.+-. ....--+...+-+++. ..|++|+=... +.-|+-++
T Consensus 61 ~~~ILiVdDd~-~~~~~l~~~L~~~g~~-~v~~a~~~~eal~~l~~~~~~~~~~~~~~~~~~dlillD~~lp~~~G~el~ 138 (206)
T 3mm4_A 61 GKRVLVVDDNF-ISRKVATGKLKKMGVS-EVEQCDSGKEALRLVTEGLTQREEQGSVDKLPFDYIFMDCQMPEMDGYEAT 138 (206)
T ss_dssp TCEEEEECSCH-HHHHHHHHHHHHTTCS-EEEEESSHHHHHHHHHHHHHHHHHHTCSSCCSCSEEEEESCCSSSCHHHHH
T ss_pred CCEEEEEeCCH-HHHHHHHHHHHHcCCC-eeeeeCCHHHHHHHHHhhcccccccccccCCCCCEEEEcCCCCCCCHHHHH
Confidence 45677776544 3445555555555421 1111224444444443 36888875443 44577777
Q ss_pred HHHH-------cCCceEEcCCCC-c----ccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 496 HAMR-------YGTVPIVASTGG-L----VDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 496 EAma-------~G~PvI~s~~gg-~----~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+.+. ..+|+|...... - .+.+..|..+|+. .|.+ +|.++|.+++..
T Consensus 139 ~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~----------KP~~--~L~~~i~~~l~~ 196 (206)
T 3mm4_A 139 REIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLD----------KSLN--QLANVIREIESK 196 (206)
T ss_dssp HHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEE----------TTCT--THHHHHHHHC--
T ss_pred HHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEc----------CcHH--HHHHHHHHHHhh
Confidence 7665 457777654322 2 2344567889987 7777 889999888875
No 456
>1xv5_A AGT, DNA alpha-glucosyltransferase; HET: DNA CME UDP; 1.73A {Enterobacteria phage T4} PDB: 1y6f_A* 1y6g_A* 1ya6_A* 1y8z_A*
Probab=20.89 E-value=5e+02 Score=23.99 Aligned_cols=151 Identities=15% Similarity=0.165 Sum_probs=88.6
Q ss_pred EEEEEcCcccccCHHHHHHHHHhcccCC-cEEEEEeCCchhHHHHHHHHHHH-----------C---CCce-EEEeccCh
Q 007224 405 VIGFIGRLEEQKGSDILAAAIPHFIKEN-VQIIVLGTGKKPMEKQLEQLEIL-----------Y---PEKA-RGVAKFNI 468 (612)
Q Consensus 405 ~il~iGrl~~~Kg~d~ll~a~~~l~~~~-~~lvivG~g~~~~~~~l~~l~~~-----------~---~~~i-~~~~~~~~ 468 (612)
+=-|+||-+.+||+-.+.+--+++.+|. -.-++-|-....-.-.+++.... . |+.- ...--+-.
T Consensus 199 inrwigrtttwkgfyqmfdfhekflkpagkstvmeglerspafiaikekgipyeyygnreidkmnlapnqpaqildcyin 278 (401)
T 1xv5_A 199 INRWIGRTTTWKGFYQMFDFHEKFLKPAGKSTVMEGLERSPAFIAIKEKGIPYEYYGNREIDKMNLAPNQPAQILDCYIN 278 (401)
T ss_dssp EEEEECCSCGGGCHHHHHHHHHHTTTTTTCEEEEECCCCSHHHHHHHHTTCCEEEECGGGGGGCCCSSSCCEEEESCCCH
T ss_pred hhhhhcccchhHhHHHHhhHHHHhcCccchhhhhhhhhcCCceEEEcccCCchhhcCcchhhhhcCCCCCcchhhhheec
Confidence 4568999999999999999999998863 34455554321111222221110 0 1111 11111222
Q ss_pred HHHHHHHHhcCEEEeCCCC------CCCcHHHHHHHHcCCceEEcC-CCCcccc------eecCceEEEecccccccCCC
Q 007224 469 PLAHMIIAGADFILIPSRF------EPCGLIQLHAMRYGTVPIVAS-TGGLVDT------VEEGFTGFQMGSFSVDCEAV 535 (612)
Q Consensus 469 ~~~~~~l~~adi~l~pS~~------E~~gl~~lEAma~G~PvI~s~-~gg~~e~------v~~g~~G~l~~~~~~~~~~v 535 (612)
.++-+-+..+.+.-..|.. -..-..-+|--+||+.+|--. +|..-.. +..-..|++. +
T Consensus 279 semlermsksgfgyqlsklnqkylqrsleythlelgacgtipvfwkstgenlkfrvdntpltshdsgiiw---------f 349 (401)
T 1xv5_A 279 SEMLERMSKSGFGYQLSKLNQKYLQRSLEYTHLELGACGTIPVFWKSTGENLKFRVDNTPLTSHDSGIIW---------F 349 (401)
T ss_dssp HHHHHHHHTEEEEEECCCCCGGGCSSCCCHHHHHHHHHTSEEEEEHHHHHHSBCTTTCCBGGGSCCSCEE---------E
T ss_pred HHHHHHhhhcCcccchHHHHHHHHHhhhhhheeecccccceeeeecccCcceEEEecCCcccccCCceEE---------e
Confidence 2333467777887777643 346778999999999877653 3321111 1112345553 5
Q ss_pred CCCCHHHHHHHHHHHHHhhCHHHHHHHHHHH
Q 007224 536 DPVDVAAVSTTVRRALATYGTQALAEMMKNG 566 (612)
Q Consensus 536 ~~~d~~~la~~l~~ll~~~~~~~~~~~~~~~ 566 (612)
+.+|.++--+.|+++-.+ +..+.+..+++
T Consensus 350 dendmestferikelssd--ralydrereka 378 (401)
T 1xv5_A 350 DENDMESTFERIKELSSD--RALYDREREKA 378 (401)
T ss_dssp CTTCHHHHHHHHHHHHTC--HHHHHHHHHHH
T ss_pred cCCchHHHHHHHHHhccc--hhhhhHHHHHH
Confidence 899999999999888877 55555544444
No 457
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=20.85 E-value=3.3e+02 Score=21.90 Aligned_cols=109 Identities=15% Similarity=0.223 Sum_probs=64.1
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHHh-------cCEEEeCCCC-CCCcHHHHHHHHc----
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAG-------ADFILIPSRF-EPCGLIQLHAMRY---- 500 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~~-------adi~l~pS~~-E~~gl~~lEAma~---- 500 (612)
.+++|+.+.+ .....++.+....+...... .-++..+-..+.. .|++++=-.. +.-|+-+++.+..
T Consensus 3 ~~ILivdD~~-~~~~~l~~~L~~~g~~~v~~-~~~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~lr~~~~~ 80 (133)
T 2r25_B 3 VKILVVEDNH-VNQEVIKRMLNLEGIENIEL-ACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKMIRRDLGY 80 (133)
T ss_dssp SCEEEECSCH-HHHHHHHHHHHHTTCCCEEE-ESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHHHHHHSCC
T ss_pred ceEEEEcCCH-HHHHHHHHHHHHcCCceEEE-ECCHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHHHHhhcCC
Confidence 4566766644 34555555555444221211 2244444344433 5888875443 3457777777652
Q ss_pred CCceEEcC-CCC---cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 501 GTVPIVAS-TGG---LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 501 G~PvI~s~-~gg---~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.+|+|.-. ... ..+..+.|..+|+. .|.+.+++.++|.+++..
T Consensus 81 ~~~ii~lt~~~~~~~~~~~~~~ga~~~l~----------KP~~~~~L~~~l~~~~~~ 127 (133)
T 2r25_B 81 TSPIVALTAFADDSNIKECLESGMNGFLS----------KPIKRPKLKTILTEFCAA 127 (133)
T ss_dssp CSCEEEEESCCSHHHHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCHHHHHHHHHcCCCEEEe----------CCCCHHHHHHHHHHHHHh
Confidence 46776543 332 23345567889987 999999999999988754
No 458
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=20.82 E-value=59 Score=33.46 Aligned_cols=37 Identities=32% Similarity=0.284 Sum_probs=26.2
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecC
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRY 128 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~ 128 (612)
+.+|+|++++. +|++| ..|+..|.+.|++|.+++...
T Consensus 67 ~~~~~vlVTGa-------tG~iG---~~l~~~L~~~g~~V~~~~R~~ 103 (427)
T 4f6c_A 67 RPLGNTLLTGA-------TGFLG---AYLIEALQGYSHRIYCFIRAD 103 (427)
T ss_dssp CCCEEEEEECT-------TSHHH---HHHHHHHTTTEEEEEEEEECS
T ss_pred CCCCEEEEecC-------CcHHH---HHHHHHHHcCCCEEEEEECCC
Confidence 33456665543 57777 467778899999999997653
No 459
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=20.77 E-value=59 Score=32.27 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=23.1
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhC-CCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAAN-GHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~-Gh~V~vit~~ 127 (612)
|||++++. +|++| ..|++.|.+. ||+|.++...
T Consensus 1 MkvlVTGa-------sG~iG---~~l~~~L~~~~g~~V~~~~r~ 34 (361)
T 1kew_A 1 MKILITGG-------AGFIG---SAVVRHIIKNTQDTVVNIDKL 34 (361)
T ss_dssp CEEEEEST-------TSHHH---HHHHHHHHHHCSCEEEEEECC
T ss_pred CEEEEECC-------CchHh---HHHHHHHHhcCCCeEEEEecC
Confidence 78766553 47777 4567778887 7999988643
No 460
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=20.76 E-value=1.9e+02 Score=27.01 Aligned_cols=38 Identities=16% Similarity=0.227 Sum_probs=21.8
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHh-CCCeEEEEeecC
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAA-NGHRVMTIAPRY 128 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~-~Gh~V~vit~~~ 128 (612)
+.+|||+++.+. .+..+..|..++.+ .+++|..+....
T Consensus 10 ~~~~ri~vl~SG---------~gsnl~all~~~~~~~~~eI~~Vis~~ 48 (215)
T 3da8_A 10 SAPARLVVLASG---------TGSLLRSLLDAAVGDYPARVVAVGVDR 48 (215)
T ss_dssp CSSEEEEEEESS---------CCHHHHHHHHHSSTTCSEEEEEEEESS
T ss_pred CCCcEEEEEEeC---------ChHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 346899988642 23345555555533 345777666653
No 461
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=20.73 E-value=4.5e+02 Score=26.53 Aligned_cols=89 Identities=15% Similarity=0.088 Sum_probs=56.0
Q ss_pred HHHHHhCCC-CCCCCcEEEEEcCcccc--cCHHHHHHHHHhcccCCcEEEEEeCC-c----hhHHHHHHHHHHHCCCceE
Q 007224 390 ALQAEVGLP-VDRNIPVIGFIGRLEEQ--KGSDILAAAIPHFIKENVQIIVLGTG-K----KPMEKQLEQLEILYPEKAR 461 (612)
Q Consensus 390 ~l~~~~gl~-~~~~~~~il~iGrl~~~--Kg~d~ll~a~~~l~~~~~~lvivG~g-~----~~~~~~l~~l~~~~~~~i~ 461 (612)
.+++.+|-+ .+.-+.+|.|+|-+..- .=..-++.++.++ ++++.++++. . +.+.+.+++.+++.+..+.
T Consensus 178 TI~E~~g~~~l~glkvvva~vGDl~~~~nrva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g~~v~ 254 (359)
T 1zq6_A 178 ALQEHFGTPDLRGKKYVLTWTYHPKPLNTAVANSALTIATRM---GMDVTLLCPTPDYILDERYMDWAAQNVAESGGSLQ 254 (359)
T ss_dssp HHHHHHTSSCCTTCEEEEEECCCSSCCCSHHHHHHHHHHHHT---TCEEEEECSSGGGCCCHHHHHHHHHHHHHHSCEEE
T ss_pred HHHHHhCCCcccCCeeEEEEEecccccccchHHHHHHHHHHc---CCEEEEEcCccccCCCHHHHHHHHHHHHHcCCeEE
Confidence 456677631 11211239999997643 4467888888888 7899999986 3 2344555666666664443
Q ss_pred EEeccChHHHHHHHHhcCEEEeCCC
Q 007224 462 GVAKFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 462 ~~~~~~~~~~~~~l~~adi~l~pS~ 486 (612)
..- + +.+.++.||++.....
T Consensus 255 ~~~--d---~~eav~~aDvVyt~~w 274 (359)
T 1zq6_A 255 VSH--D---IDSAYAGADVVYAKSW 274 (359)
T ss_dssp EEC--C---HHHHHTTCSEEEEECC
T ss_pred EEC--C---HHHHhcCCCEEEECCc
Confidence 321 2 2357899999887653
No 462
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=20.73 E-value=1.2e+02 Score=26.62 Aligned_cols=38 Identities=16% Similarity=0.076 Sum_probs=27.1
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|..|||.+=+. .+|.+ +=..|...|.++||+|.=+.+.
T Consensus 5 m~~mkI~igsD-------haG~~-lK~~i~~~L~~~G~eV~D~G~~ 42 (148)
T 4em8_A 5 MVVKRVFLSSD-------HAGVE-LRLFLSAYLRDLGCEVFDCGCD 42 (148)
T ss_dssp CSCSEEEEEEC-------GGGHH-HHHHHHHHHHHTTCEEEECCCC
T ss_pred ceeeEEEEEEC-------chhHH-HHHHHHHHHHHCCCEEEEeCCC
Confidence 45688877664 35655 4556778899999999877553
No 463
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=20.72 E-value=91 Score=29.38 Aligned_cols=33 Identities=24% Similarity=0.493 Sum_probs=24.8
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 8 k~~lVTGa------s~gIG---~aia~~l~~~G~~V~~~~r~ 40 (257)
T 3tpc_A 8 RVFIVTGA------SSGLG---AAVTRMLAQEGATVLGLDLK 40 (257)
T ss_dssp CEEEEEST------TSHHH---HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCC------CCHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 56666643 57777 56888999999999887654
No 464
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=20.70 E-value=63 Score=31.77 Aligned_cols=33 Identities=21% Similarity=0.415 Sum_probs=24.5
Q ss_pred CCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 83 VGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 83 ~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
..|||.||.. |-.| ..++..|++.||+|+++-.
T Consensus 8 ~~~~IgiIG~--------G~mG---~~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGL--------GAMG---TIMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECC--------SHHH---HHHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEECC--------CHHH---HHHHHHHHHCCCEEEEEeC
Confidence 3589999963 3333 5688999999999988743
No 465
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=20.69 E-value=62 Score=32.61 Aligned_cols=34 Identities=26% Similarity=0.200 Sum_probs=24.2
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|..++|++|+.. .+|+. +|..|+++|++|+|+=.
T Consensus 9 m~~~dVvIVGaG------~aGl~-----~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 9 GKTRRAEVAGGG------FAGLT-----AAIALKQNGWDVRLHEK 42 (379)
T ss_dssp --CCEEEEECCS------HHHHH-----HHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECCC------HHHHH-----HHHHHHHCCCCEEEEec
Confidence 446889999743 23444 77789999999999954
No 466
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=20.68 E-value=2.6e+02 Score=27.99 Aligned_cols=79 Identities=22% Similarity=0.261 Sum_probs=0.0
Q ss_pred EEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChH---------HHHHHHHhcCEEEe-----CCCCCCCcHHHHHHHH
Q 007224 434 QIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIP---------LAHMIIAGADFILI-----PSRFEPCGLIQLHAMR 499 (612)
Q Consensus 434 ~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~---------~~~~~l~~adi~l~-----pS~~E~~gl~~lEAma 499 (612)
++-|+|-|. +-..+.+....++-++...-....+ .+.++++.||++++ +....-++-..+..|-
T Consensus 150 tvgIiGlG~--IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk 227 (343)
T 2yq5_A 150 TVGLIGVGH--IGSAVAEIFSAMGAKVIAYDVAYNPEFEPFLTYTDFDTVLKEADIVSLHTPLFPSTENMIGEKQLKEMK 227 (343)
T ss_dssp EEEEECCSH--HHHHHHHHHHHTTCEEEEECSSCCGGGTTTCEECCHHHHHHHCSEEEECCCCCTTTTTCBCHHHHHHSC
T ss_pred eEEEEecCH--HHHHHHHHHhhCCCEEEEECCChhhhhhccccccCHHHHHhcCCEEEEcCCCCHHHHHHhhHHHHhhCC
Q ss_pred cCCceEEcCCCCccc
Q 007224 500 YGTVPIVASTGGLVD 514 (612)
Q Consensus 500 ~G~PvI~s~~gg~~e 514 (612)
-|.-+|-+..|++.+
T Consensus 228 ~gailIN~aRg~~vd 242 (343)
T 2yq5_A 228 KSAYLINCARGELVD 242 (343)
T ss_dssp TTCEEEECSCGGGBC
T ss_pred CCcEEEECCCChhhh
No 467
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=20.63 E-value=2.2e+02 Score=28.37 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=31.2
Q ss_pred HHHHHHhcCEEEeCCC--CCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILIPSR--FEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~--~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++.-- .+. ++-..++.|.-|.-+|-+..|++.+
T Consensus 191 l~ell~~aDvV~~~~P~~~~t~~li~~~~l~~mk~ga~lIn~srg~~vd 239 (333)
T 1dxy_A 191 LEDLFKQSDVIDLHVPGIEQNTHIINEAAFNLMKPGAIVINTARPNLID 239 (333)
T ss_dssp HHHHHHHCSEEEECCCCCGGGTTSBCHHHHHHSCTTEEEEECSCTTSBC
T ss_pred HHHHHhcCCEEEEcCCCchhHHHHhCHHHHhhCCCCcEEEECCCCcccC
Confidence 4468899999987432 233 4455888888888888888777554
No 468
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=20.59 E-value=83 Score=29.44 Aligned_cols=24 Identities=25% Similarity=0.408 Sum_probs=19.6
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++|++|.++..
T Consensus 13 s~giG---~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 13 SRGIG---RAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeC
Confidence 57777 5678889999999988765
No 469
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=20.57 E-value=4.2e+02 Score=24.37 Aligned_cols=95 Identities=17% Similarity=0.145 Sum_probs=54.9
Q ss_pred cEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCchhHHHHHHHHHHHCCCceEEEecc-ChHHHH-HHHHhcCEE
Q 007224 404 PVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKF-NIPLAH-MIIAGADFI 481 (612)
Q Consensus 404 ~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~-~~~~~~-~~l~~adi~ 481 (612)
++|-.+-..+.. .+++.++.+.+-.+.++-+......-.+.++++.++++.-+...+.+ ..+.+. .+-.+||++
T Consensus 17 ~~i~v~r~~~~~----~~~~~~~al~~gGv~~iel~~k~~~~~~~i~~l~~~~~~~~vgagtvi~~d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 17 PVVPVIVVKKLE----HAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFA 92 (214)
T ss_dssp SEEEEECCSSGG----GHHHHHHHHHHTTCCEEEEESCSTTHHHHHHHHHHHCTTSEEEEESCCSHHHHHHHHHHTCSCE
T ss_pred CEEEEEECCCHH----HHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHHHCcCCEEeeCEEEEHHHHHHHHHcCCCEE
Confidence 455555444433 34455555545466676666655555778888888887645544444 333333 467889999
Q ss_pred EeCCCCCCCcHHHHHHHHcCCceE
Q 007224 482 LIPSRFEPCGLIQLHAMRYGTVPI 505 (612)
Q Consensus 482 l~pS~~E~~gl~~lEAma~G~PvI 505 (612)
+.|...+ -+.-.+-.+|.|.|
T Consensus 93 ~~p~~d~---~v~~~~~~~g~~~i 113 (214)
T 1wbh_A 93 ISPGLTE---PLLKAATEGTIPLI 113 (214)
T ss_dssp EESSCCH---HHHHHHHHSSSCEE
T ss_pred EcCCCCH---HHHHHHHHhCCCEE
Confidence 9885421 12233344666655
No 470
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=20.56 E-value=86 Score=29.71 Aligned_cols=25 Identities=20% Similarity=0.295 Sum_probs=19.8
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 16 s~gIG---~~ia~~l~~~G~~V~~~~r~ 40 (262)
T 1zem_A 16 GGNIG---LATALRLAEEGTAIALLDMN 40 (262)
T ss_dssp TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56888899999999887643
No 471
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=20.49 E-value=60 Score=30.62 Aligned_cols=24 Identities=21% Similarity=0.315 Sum_probs=19.6
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
.||+| ..+++.|+++|++|.++..
T Consensus 16 sggiG---~~~a~~l~~~G~~V~~~~r 39 (261)
T 1gee_A 16 STGLG---KSMAIRFATEKAKVVVNYR 39 (261)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEES
T ss_pred CChHH---HHHHHHHHHCCCEEEEEcC
Confidence 57777 5688889999999988765
No 472
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=20.49 E-value=64 Score=30.78 Aligned_cols=33 Identities=27% Similarity=0.316 Sum_probs=24.0
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||++++ .|.+| ..|++.|.++||+|++++..
T Consensus 5 ~~~ilVtG--------aG~iG---~~l~~~L~~~g~~V~~~~r~ 37 (286)
T 3ius_A 5 TGTLLSFG--------HGYTA---RVLSRALAPQGWRIIGTSRN 37 (286)
T ss_dssp CCEEEEET--------CCHHH---HHHHHHHGGGTCEEEEEESC
T ss_pred cCcEEEEC--------CcHHH---HHHHHHHHHCCCEEEEEEcC
Confidence 37777664 14444 56788899999999999765
No 473
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=20.48 E-value=1.1e+02 Score=28.01 Aligned_cols=24 Identities=25% Similarity=0.068 Sum_probs=21.0
Q ss_pred ccHHHHhhhhHHHHHhCCCeEEEE
Q 007224 101 GGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 101 GG~~~~~~~La~~L~~~Gh~V~vi 124 (612)
-|-.+.+..|+.+|+++|++|.++
T Consensus 13 vGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 13 VGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp SCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEE
Confidence 466778888999999999999986
No 474
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=20.40 E-value=2.3e+02 Score=28.20 Aligned_cols=44 Identities=23% Similarity=0.167 Sum_probs=30.5
Q ss_pred HHHHHHhcCEEEeCCC--CCC---CcHHHHHHHHcCCceEEcCCCCccc
Q 007224 471 AHMIIAGADFILIPSR--FEP---CGLIQLHAMRYGTVPIVASTGGLVD 514 (612)
Q Consensus 471 ~~~~l~~adi~l~pS~--~E~---~gl~~lEAma~G~PvI~s~~gg~~e 514 (612)
+.++++.||++++.-. .+. ++-..++.|.-|.-+|-+..|++.+
T Consensus 193 l~ell~~aDvV~l~~p~~~~t~~li~~~~l~~mk~ga~lIn~arg~~vd 241 (333)
T 1j4a_A 193 LDDLYKQADVISLHVPDVPANVHMINDESIAKMKQDVVIVNVSRGPLVD 241 (333)
T ss_dssp HHHHHHHCSEEEECSCCCGGGTTCBSHHHHHHSCTTEEEEECSCGGGBC
T ss_pred HHHHHhhCCEEEEcCCCcHHHHHHHhHHHHhhCCCCcEEEECCCCcccC
Confidence 4468899999987533 222 3445778888888788877777554
No 475
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=20.39 E-value=62 Score=30.78 Aligned_cols=29 Identities=31% Similarity=0.496 Sum_probs=21.8
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEE
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTI 124 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vi 124 (612)
|||.+|+. |..| ..++..|++.||+|+++
T Consensus 1 M~I~iIG~--------G~mG---~~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGF--------GEVA---QTLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEESC--------SHHH---HHHHHHHHHTTCEEEEC
T ss_pred CeEEEEec--------hHHH---HHHHHHHHHCCCeEEEe
Confidence 78888852 4444 45788899999998884
No 476
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=20.38 E-value=1.1e+02 Score=27.23 Aligned_cols=39 Identities=23% Similarity=0.230 Sum_probs=31.2
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|+++.|+. | ...|-.+.+..|+..|.++|++|.++...
T Consensus 3 ~~~~i~i~G---~--sGsGKTTl~~~L~~~l~~~g~~v~~ik~~ 41 (169)
T 1xjc_A 3 AMNVWQVVG---Y--KHSGKTTLMEKWVAAAVREGWRVGTVKHH 41 (169)
T ss_dssp -CCEEEEEC---C--TTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCEEEEEEC---C--CCCCHHHHHHHHHHhhHhcCCeeeEEEeC
Confidence 577777765 2 25688999999999999999999998865
No 477
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=20.34 E-value=1.3e+02 Score=26.17 Aligned_cols=39 Identities=10% Similarity=-0.001 Sum_probs=31.5
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
..||++|-.+ + +|....++..++..|.+.|++|.++-..
T Consensus 4 ~~kv~IvY~S--~---~GnT~~iA~~ia~~l~~~g~~v~~~~~~ 42 (159)
T 3fni_A 4 ETSIGVFYVS--E---YGYSDRLAQAIINGITKTGVGVDVVDLG 42 (159)
T ss_dssp CCEEEEEECT--T---STTHHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEEEEC--C---ChHHHHHHHHHHHHHHHCCCeEEEEECc
Confidence 3577777543 3 6999999999999999999999887654
No 478
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=20.25 E-value=4.4e+02 Score=23.08 Aligned_cols=108 Identities=11% Similarity=0.076 Sum_probs=64.5
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH---cCCceEE
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR---YGTVPIV 506 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma---~G~PvI~ 506 (612)
.+++|+.+.+ .....++.+....+-.+. ..-+...+-..+. ..|++++=... +.-|+.+++.+. .++|+|.
T Consensus 5 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~ii~ 81 (208)
T 1yio_A 5 PTVFVVDDDM-SVREGLRNLLRSAGFEVE--TFDCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQLTAISDGIPIVF 81 (208)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHTTTCEEE--EESSHHHHHHHCCTTSCEEEEEESCCSSSCHHHHHHHHHHTTCCCCEEE
T ss_pred CEEEEEcCCH-HHHHHHHHHHHhCCceEE--EcCCHHHHHHhhhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCEEE
Confidence 4666776544 345555555544442232 2224444433333 34777764433 446777777765 3677776
Q ss_pred cCCC----CcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 507 ASTG----GLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 507 s~~g----g~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
-... -..+.+..|..+|+. .|.+.+++...|..++..
T Consensus 82 ls~~~~~~~~~~a~~~Ga~~~l~----------Kp~~~~~L~~~i~~~~~~ 122 (208)
T 1yio_A 82 ITAHGDIPMTVRAMKAGAIEFLP----------KPFEEQALLDAIEQGLQL 122 (208)
T ss_dssp EESCTTSCCCHHHHHTTEEEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHCCCcEEEe----------CCCCHHHHHHHHHHHHhh
Confidence 5322 233445567889987 899999999999998864
No 479
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=20.24 E-value=1.1e+02 Score=30.53 Aligned_cols=33 Identities=33% Similarity=0.488 Sum_probs=23.1
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
+|||+|+++ |. +.....++|.+.||+|..+...
T Consensus 2 ~mrivf~Gt---p~--------fa~~~L~~L~~~~~~v~~Vvt~ 34 (314)
T 3tqq_A 2 SLKIVFAGT---PQ--------FAVPTLRALIDSSHRVLAVYTQ 34 (314)
T ss_dssp CCEEEEEEC---SG--------GGHHHHHHHHHSSSEEEEEECC
T ss_pred CcEEEEECC---CH--------HHHHHHHHHHHCCCeEEEEEeC
Confidence 699999986 32 1223347788889999777665
No 480
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=20.22 E-value=3.8e+02 Score=24.01 Aligned_cols=108 Identities=17% Similarity=0.181 Sum_probs=63.9
Q ss_pred cEEEEEeCCchhHHHHHHHHHHHCCCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHH--cCCceEEc
Q 007224 433 VQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMR--YGTVPIVA 507 (612)
Q Consensus 433 ~~lvivG~g~~~~~~~l~~l~~~~~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma--~G~PvI~s 507 (612)
.+++|+.+.+ .....+..+....+-.+. .--+...+...+. ..|++++-... +.-|+.+++.+. ..+|+|.-
T Consensus 5 ~~ilivdd~~-~~~~~l~~~L~~~g~~v~--~~~~~~~al~~~~~~~~dlvllD~~l~~~~g~~~~~~l~~~~~~~ii~l 81 (230)
T 2oqr_A 5 TSVLIVEDEE-SLADPLAFLLRKEGFEAT--VVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMV 81 (230)
T ss_dssp CEEEEECSCH-HHHHHHHHHHHHTTCEEE--EECSHHHHHHHHHHHCCSEEEEESSCSSSCHHHHHHHHHHHCSCSEEEE
T ss_pred CeEEEEeCCH-HHHHHHHHHHHHCCCEEE--EECCHHHHHHHHhccCCCEEEEECCCCCCCHHHHHHHHHcCCCCCEEEE
Confidence 4667776654 345555555555443232 2224444433443 46888875443 345666666654 46777765
Q ss_pred CCCC----cccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 508 STGG----LVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 508 ~~gg----~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
.... ..+.+..|..|++. .|.+.+++..+|..++..
T Consensus 82 t~~~~~~~~~~~~~~ga~~~l~----------Kp~~~~~l~~~i~~~~~~ 121 (230)
T 2oqr_A 82 TARDSEIDKVVGLELGADDYVT----------KPYSARELIARIRAVLRR 121 (230)
T ss_dssp ECCHHHHHHHHHHHHCCSCCCC----------SSCCHHHHHHHHHHHHTT
T ss_pred eCCCcHHHHHHHHHcCCCEEEe----------CCCCHHHHHHHHHHHHhh
Confidence 4322 22334457778865 899999999999998864
No 481
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=20.22 E-value=4.4e+02 Score=26.27 Aligned_cols=86 Identities=13% Similarity=0.112 Sum_probs=55.3
Q ss_pred HHHHH-hCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc----hhHHHHHHHHHHHCCCceEEEe
Q 007224 390 ALQAE-VGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVA 464 (612)
Q Consensus 390 ~l~~~-~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~i~~~~ 464 (612)
.+++. .|-+. +...|.|+|-. ...=..-++.++.++ ++++.++++.. +.+.+.+++.+++.+..+...
T Consensus 143 Ti~e~~~g~~l--~gl~ia~vGD~-~~~va~Sl~~~~~~~---G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G~~v~~~- 215 (333)
T 1duv_G 143 TMQEHLPGKAF--NEMTLVYAGDA-RNNMGNSMLEAAALT---GLDLRLVAPQACWPEAALVTECRALAQQNGGNITLT- 215 (333)
T ss_dssp HHHHHSTTCCG--GGCEEEEESCT-TSHHHHHHHHHHHHH---CCEEEEECCGGGCCCHHHHHHHHHHHHHTTCEEEEE-
T ss_pred HHHHHhcCCCC--CCcEEEEECCC-ccchHHHHHHHHHHc---CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEE-
Confidence 35666 55111 23689999986 334456677788777 78999999843 234455566666776544333
Q ss_pred ccChHHHHHHHHhcCEEEeCCC
Q 007224 465 KFNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 465 ~~~~~~~~~~l~~adi~l~pS~ 486 (612)
+.+.+.++.||++....+
T Consensus 216 ----~d~~eav~~aDvvytd~w 233 (333)
T 1duv_G 216 ----EDVAKGVEGADFIYTDVW 233 (333)
T ss_dssp ----SCHHHHHTTCSEEEECCS
T ss_pred ----ECHHHHhCCCCEEEeCCc
Confidence 123357899999988665
No 482
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=20.18 E-value=88 Score=29.48 Aligned_cols=33 Identities=21% Similarity=0.372 Sum_probs=24.4
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|+++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 13 k~vlVTGa------s~gIG---~aia~~l~~~G~~V~~~~r~ 45 (252)
T 3f1l_A 13 RIILVTGA------SDGIG---REAAMTYARYGATVILLGRN 45 (252)
T ss_dssp CEEEEEST------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 56666642 57777 56888999999999887643
No 483
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=20.17 E-value=76 Score=29.97 Aligned_cols=25 Identities=28% Similarity=0.497 Sum_probs=19.9
Q ss_pred cccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 100 TGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 100 ~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.||+| ..+++.|+++|++|.++...
T Consensus 23 s~gIG---~~ia~~l~~~G~~V~~~~r~ 47 (260)
T 2zat_A 23 TDGIG---LAIARRLAQDGAHVVVSSRK 47 (260)
T ss_dssp SSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CcHHH---HHHHHHHHHCCCEEEEEeCC
Confidence 57777 56788899999999887643
No 484
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=20.13 E-value=90 Score=29.40 Aligned_cols=33 Identities=18% Similarity=0.298 Sum_probs=23.9
Q ss_pred eEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 86 NILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 86 kIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|.++|+.- .||+| ..+++.|+++|++|.++...
T Consensus 3 k~vlVTGa------s~gIG---~~ia~~l~~~G~~V~~~~r~ 35 (256)
T 1geg_A 3 KVALVTGA------GQGIG---KAIALRLVKDGFAVAIADYN 35 (256)
T ss_dssp CEEEEETT------TSHHH---HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECC------CChHH---HHHHHHHHHCCCEEEEEeCC
Confidence 45566532 57777 56888899999999887643
No 485
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=20.10 E-value=77 Score=30.87 Aligned_cols=33 Identities=21% Similarity=0.305 Sum_probs=24.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
.|||.+|.. |-+| ..++..|++.||+|+++...
T Consensus 3 m~~I~iiG~--------G~mG---~~~a~~l~~~G~~V~~~d~~ 35 (302)
T 2h78_A 3 MKQIAFIGL--------GHMG---APMATNLLKAGYLLNVFDLV 35 (302)
T ss_dssp CCEEEEECC--------STTH---HHHHHHHHHTTCEEEEECSS
T ss_pred CCEEEEEee--------cHHH---HHHHHHHHhCCCeEEEEcCC
Confidence 479999973 3333 45788899999999888543
No 486
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=20.10 E-value=59 Score=33.66 Aligned_cols=32 Identities=31% Similarity=0.288 Sum_probs=23.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
++|++|+.- ..|+. +|..|+++|++|+|+-.+
T Consensus 23 ~~ViIVGaG------paGl~-----~A~~La~~G~~V~viE~~ 54 (430)
T 3ihm_A 23 KRIGIVGAG------TAGLH-----LGLFLRQHDVDVTVYTDR 54 (430)
T ss_dssp CEEEEECCH------HHHHH-----HHHHHHHTTCEEEEEESC
T ss_pred CCEEEECCc------HHHHH-----HHHHHHHCCCeEEEEcCC
Confidence 479988743 23444 788899999999999654
No 487
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=20.08 E-value=5.6e+02 Score=25.57 Aligned_cols=84 Identities=12% Similarity=0.071 Sum_probs=54.8
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc----hhHHHHHHHHHHHCCCceEEEec
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
.+++..|-- +...|.|+|-+ ..=..-++.++.++ ++++.++++.. +.+.+.+++.+++.+..+...-
T Consensus 169 TI~E~~G~l---~glkva~vGD~--~nva~Sl~~~~~~~---G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~v~~~~- 239 (340)
T 4ep1_A 169 TIYEETNTF---KGIKLAYVGDG--NNVCHSLLLASAKV---GMHMTVATPVGYRPNEEIVKKALAIAKETGAEIEILH- 239 (340)
T ss_dssp HHHHHHSCC---TTCEEEEESCC--CHHHHHHHHHHHHH---TCEEEEECCTTCCCCHHHHHHHHHHHHHHCCCEEEES-
T ss_pred HHHHHhCCC---CCCEEEEECCC--chhHHHHHHHHHHc---CCEEEEECCcccCCCHHHHHHHHHHHHHcCCeEEEEC-
Confidence 456666632 34689999987 22356677788877 78999999843 3344555555666665454321
Q ss_pred cChHHHHHHHHhcCEEEeCCC
Q 007224 466 FNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~ 486 (612)
.+.+.++.||++.....
T Consensus 240 ----d~~eav~~aDVvyt~~w 256 (340)
T 4ep1_A 240 ----NPELAVNEADFIYTDVW 256 (340)
T ss_dssp ----CHHHHHTTCSEEEECCC
T ss_pred ----CHHHHhCCCCEEEecCc
Confidence 13357899999987654
No 488
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=20.07 E-value=63 Score=31.64 Aligned_cols=32 Identities=28% Similarity=0.429 Sum_probs=24.7
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEee
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAP 126 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~ 126 (612)
|||++| ||.|.+-..++..|++.||+|.++..
T Consensus 22 ~~I~iI----------Gg~G~mG~~la~~l~~~G~~V~~~~~ 53 (298)
T 2pv7_A 22 HKIVIV----------GGYGKLGGLFARYLRASGYPISILDR 53 (298)
T ss_dssp CCEEEE----------TTTSHHHHHHHHHHHTTTCCEEEECT
T ss_pred CEEEEE----------cCCCHHHHHHHHHHHhCCCeEEEEEC
Confidence 578877 44555667789999999999998853
No 489
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=20.07 E-value=4.6e+02 Score=25.79 Aligned_cols=85 Identities=13% Similarity=0.076 Sum_probs=55.5
Q ss_pred HHHHHhCCCCCCCCcEEEEEcCcccccCHHHHHHHHHhcccCCcEEEEEeCCc----hhHHHHHHHHHHHCCCceEEEec
Q 007224 390 ALQAEVGLPVDRNIPVIGFIGRLEEQKGSDILAAAIPHFIKENVQIIVLGTGK----KPMEKQLEQLEILYPEKARGVAK 465 (612)
Q Consensus 390 ~l~~~~gl~~~~~~~~il~iGrl~~~Kg~d~ll~a~~~l~~~~~~lvivG~g~----~~~~~~l~~l~~~~~~~i~~~~~ 465 (612)
.+++..|-- +...|.|+|-. ...=..-++.++.++ ++++.++++.. +.+.+.+++.+++.+..+...
T Consensus 138 Ti~e~~g~l---~gl~va~vGD~-~~rva~Sl~~~~~~~---g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G~~~~~~-- 208 (307)
T 2i6u_A 138 TIAERKGAL---RGLRLSYFGDG-ANNMAHSLLLGGVTA---GIHVTVAAPEGFLPDPSVRAAAERRAQDTGASVTVT-- 208 (307)
T ss_dssp HHHHHHSCC---TTCEEEEESCT-TSHHHHHHHHHHHHT---TCEEEEECCTTSCCCHHHHHHHHHHHHHHTCCEEEE--
T ss_pred HHHHHhCCc---CCeEEEEECCC-CcCcHHHHHHHHHHC---CCEEEEECCccccCCHHHHHHHHHHHHHcCCeEEEE--
Confidence 456666621 33689999997 334456778888877 78999999853 234445566666666444433
Q ss_pred cChHHHHHHHHhcCEEEeCCC
Q 007224 466 FNIPLAHMIIAGADFILIPSR 486 (612)
Q Consensus 466 ~~~~~~~~~l~~adi~l~pS~ 486 (612)
..+.+.++.||++....+
T Consensus 209 ---~d~~eav~~aDvvy~~~w 226 (307)
T 2i6u_A 209 ---ADAHAAAAGADVLVTDTW 226 (307)
T ss_dssp ---SCHHHHHTTCSEEEECCS
T ss_pred ---ECHHHHhcCCCEEEecce
Confidence 123357899999988655
No 490
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=20.05 E-value=83 Score=26.86 Aligned_cols=36 Identities=25% Similarity=0.311 Sum_probs=28.6
Q ss_pred ceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEe
Q 007224 85 LNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIA 125 (612)
Q Consensus 85 MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit 125 (612)
|||+++-. +.+|....+...++..|.+.|++|.++-
T Consensus 2 ~ki~I~Y~-----S~tGnT~~~A~~ia~~l~~~g~~v~~~~ 37 (147)
T 2hna_A 2 ADITLISG-----STLGGAEYVAEHLAEKLEEAGFTTETLH 37 (147)
T ss_dssp CSEEEECC-----TTSCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CeEEEEEE-----CCchHHHHHHHHHHHHHHHCCCceEEec
Confidence 46766632 2379999999999999999999998763
No 491
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=20.04 E-value=1.1e+02 Score=30.75 Aligned_cols=35 Identities=17% Similarity=0.142 Sum_probs=23.2
Q ss_pred CCCceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeec
Q 007224 82 GVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPR 127 (612)
Q Consensus 82 ~~~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~ 127 (612)
|++|||+|++. | .....+.++|.+.||+|..+...
T Consensus 20 ~~~mrIvf~G~---~--------~fa~~~L~~L~~~~~~i~~Vvt~ 54 (329)
T 2bw0_A 20 FQSMKIAVIGQ---S--------LFGQEVYCHLRKEGHEVVGVFTV 54 (329)
T ss_dssp -CCCEEEEECC---H--------HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCEEEEEcC---c--------HHHHHHHHHHHHCCCeEEEEEeC
Confidence 45699999952 1 23334557788889998766654
No 492
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=20.02 E-value=3.5e+02 Score=21.85 Aligned_cols=111 Identities=10% Similarity=0.092 Sum_probs=64.4
Q ss_pred CCcEEEEEeCCchhHHHHHHHHHHHC-CCceEEEeccChHHHHHHHH--hcCEEEeCCCC-CCCcHHHHHHHHc---CCc
Q 007224 431 ENVQIIVLGTGKKPMEKQLEQLEILY-PEKARGVAKFNIPLAHMIIA--GADFILIPSRF-EPCGLIQLHAMRY---GTV 503 (612)
Q Consensus 431 ~~~~lvivG~g~~~~~~~l~~l~~~~-~~~i~~~~~~~~~~~~~~l~--~adi~l~pS~~-E~~gl~~lEAma~---G~P 503 (612)
...+++|+.+... ....++++.... +..+.. ..-+...+...+. ..|++++-... +.-|+.+++.+.. ..|
T Consensus 8 ~~~~iLivdd~~~-~~~~l~~~L~~~~~~~~v~-~~~~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ 85 (143)
T 2qv0_A 8 EKMKVIIVEDEFL-AQQELSWLINTHSQMEIVG-SFDDGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPF 85 (143)
T ss_dssp --CEEEEECSCHH-HHHHHHHHHHHHSCCEEEE-EESCHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCE
T ss_pred CceEEEEEcCCHH-HHHHHHHHHHhCCCceEEE-EeCCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCce
Confidence 3567888876553 444555544443 322221 1224444434444 35888876543 3467777777754 344
Q ss_pred eEE-cCC-CCcccceecCceEEEecccccccCCCCCCCHHHHHHHHHHHHHh
Q 007224 504 PIV-AST-GGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALAT 553 (612)
Q Consensus 504 vI~-s~~-gg~~e~v~~g~~G~l~~~~~~~~~~v~~~d~~~la~~l~~ll~~ 553 (612)
+|. +.. ....+.+..|..+++. .|.+.+++...|.+++..
T Consensus 86 ii~~s~~~~~~~~~~~~g~~~~l~----------KP~~~~~l~~~i~~~~~~ 127 (143)
T 2qv0_A 86 IVFITAWKEHAVEAFELEAFDYIL----------KPYQESRIINMLQKLTTA 127 (143)
T ss_dssp EEEEESCCTTHHHHHHTTCSEEEE----------SSCCHHHHHHHHHHHHHH
T ss_pred EEEEeCCHHHHHHHHhCCcceEEe----------CCCCHHHHHHHHHHHHHH
Confidence 443 332 2233345567888987 899999999999998875
No 493
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=20.01 E-value=1.1e+02 Score=29.65 Aligned_cols=40 Identities=13% Similarity=0.022 Sum_probs=27.3
Q ss_pred CceEEEEeccccCccccccHHHHhhhhHHHHHhCCCeEEEEeecCC
Q 007224 84 GLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHRVMTIAPRYD 129 (612)
Q Consensus 84 ~MkIl~v~~~~~P~~~~GG~~~~~~~La~~L~~~Gh~V~vit~~~~ 129 (612)
+++||+|++. |.. ..-.++.+...++++|++|++++...+
T Consensus 7 ~~rvLvv~aH--PDD----e~lg~GGtia~~~~~G~~V~vv~~T~G 46 (273)
T 3dff_A 7 ATRLLAISPH--LDD----AVLSFGAGLAQAAQDGANVLVYTVFAG 46 (273)
T ss_dssp -CEEEEEESS--TTH----HHHHHHHHHHHHHHTTCEEEEEETTCC
T ss_pred CCCEEEEEeC--CCh----HHHhHHHHHHHHHHCCCcEEEEEEeCC
Confidence 6899999974 542 233344555667789999999987644
Done!