BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 007226
(612 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5W915|USP_PEA UDP-sugar pyrophospharylase OS=Pisum sativum GN=USP PE=1 SV=1
Length = 600
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 125/509 (24%), Positives = 202/509 (39%), Gaps = 51/509 (10%)
Query: 10 VPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYC 69
VP+G L E + G+ + GG +RLG + LPA
Sbjct: 91 VPTGETLKFGDENFNKYEEAGVREARRAAFVLVAGGLGERLGY--NGIKVALPAETT--T 146
Query: 70 GRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQS 129
G L+ I + A + + G+ I P IMTS + H R L E +FG +
Sbjct: 147 GTCFLQHYIESILALQEASSEGEGQTHI-PFVIMTSD--DTHGRTLDLLESNSYFGMQPT 203
Query: 130 SFQLFEQPLVPAVDAEDGQWLVMRP---FAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRK 186
L +Q V ++ D + L + P + KP GHG + L H GI K +++ G K
Sbjct: 204 QVTLLKQEKVACLEDNDAR-LALDPQNRYRVQTKPHGHGDVHSLLHSSGILKVWYNAGLK 262
Query: 187 GATVRQVSNVVAATDLTLLAL-AGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGK 245
Q +N L A+ + +G+ K+ S A E I + + DG+
Sbjct: 263 WVLFFQDTN-----GLLFKAIPSALGVSSTKQYHVNSLAVPRKAKEAIGGITRLTHSDGR 317
Query: 246 WAYGLSCIEYTEFDKF----GITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENER 301
+ +EY + D G G +S + FP N N L ++L G E
Sbjct: 318 SM--VINVEYNQLDPLLRASGYPDGDVNSETGYSPFPGNINQLILEL------GPYIEEL 369
Query: 302 SLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTF 361
+ G + Y D T RLEC MQ+ SSR V ++T+
Sbjct: 370 AKTGGAIQEFVNPKYKDA-SKTSFKSSTRLECMMQDYPKTL--PPSSRVGFTV---METW 423
Query: 362 MVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKL--PEIEG-ND 418
Y V ++A+ K + + + + I R IL + ++ P ++ N
Sbjct: 424 FAYAP---VKNNAEDAAKVPKGNPYHSATSGEMAIYRANSLILKKAGFQVADPVLQVING 480
Query: 419 KYIDDGPPYLILLHPALGLLWEVTRQKFKGG-SVSKGSELQIEVAEFLWRNVQLDGSLII 477
+ ++ P I P GL + + + K G S+S+ S L I+ + N+ +DG+LI+
Sbjct: 481 QEVEVWP--RITWKPKWGLTFSLVKSKVSGNCSISQRSTLAIKGRKIFIENLSVDGALIV 538
Query: 478 VA-----ENVMGSTRIADNGESILQYGYR 501
A NV GS + +NG ++ Y+
Sbjct: 539 DAVDDAEVNVSGS--VQNNGWALEPVDYK 565
>sp|Q0GZS3|USP_CUCME UDP-sugar pyrophospharylase OS=Cucumis melo GN=USP PE=1 SV=1
Length = 614
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 183/451 (40%), Gaps = 46/451 (10%)
Query: 44 GGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGK-QCITPVAI 102
GG +RLG + LPA G L+ I + A +L G+ + P I
Sbjct: 148 GGLGERLGY--NGIKVALPAETT--TGTCFLQSYIEYVLALREASNRLAGESETEIPFVI 203
Query: 103 MTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLV--MRPFAPVCK 160
MTS + H R L E +FG S +L +Q V +D + + V + K
Sbjct: 204 MTSD--DTHTRTVELLESNSYFGMKPSQVKLLKQEKVACLDDNEARLAVDPHNKYRIQTK 261
Query: 161 PGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLAL-AGIGLHHGKKLG 219
P GHG + L + G+ K +H+ G + Q +N L A+ A +G+ ++
Sbjct: 262 PHGHGDVHALLYSSGLLKNWHNAGLRWVLFFQDTN-----GLLFKAIPASLGVSATREYH 316
Query: 220 FASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKF----GITRGPFSSNGLQA 275
S A E I + + DG+ + +EY + D G G ++ +
Sbjct: 317 VNSLAVPRKAKEAIGGITRLTHTDGRSM--VINVEYNQLDPLLRATGFPDGDVNNETGYS 374
Query: 276 DFPANTNILYVDLAS--AELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLEC 333
FP N N L ++L S EL S+ + ++ V N K +F + RLEC
Sbjct: 375 PFPGNINQLILELGSYIEEL---SKTQGAIKEFV-NPKYKDATKTSFKSS-----TRLEC 425
Query: 334 TMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSF 393
MQ+ S+R V +DT++ Y + A K K H G
Sbjct: 426 MMQDYPKTL--PPSARVGFTV---MDTWVAYAPVKNNPEDAAKVPK--GNPYHSATSGE- 477
Query: 394 LDILRNAYDILCQCHIKLPE-IEG--NDKYIDDGPPYLILLHPALGLLWEVTRQKFKGG- 449
+ I R +L + +K+ + +E N + ++ P I P GL + + K G
Sbjct: 478 MAIYRANSLVLRKAGVKVADPVEQVFNGQEVEVWP--RITWKPKWGLTFSEIKSKINGNC 535
Query: 450 SVSKGSELQIEVAEFLWRNVQLDGSLIIVAE 480
S+S S L I+ +++ LDG+LI+ A+
Sbjct: 536 SISPRSTLVIKGKNVYLKDLSLDGTLIVNAD 566
>sp|Q09WE7|USP1_SOYBN UDP-sugar pyrophosphorylase 1 OS=Glycine max GN=USP1 PE=1 SV=1
Length = 600
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 167/415 (40%), Gaps = 46/415 (11%)
Query: 95 QCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRP 154
Q P+ IMTS + H R L E +FG + L +Q V ++ D + L + P
Sbjct: 171 QTQIPLVIMTSD--DTHGRTLELLESNSYFGMQPTQVTLLKQEKVACLEDNDAR-LALEP 227
Query: 155 ---FAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLAL-AGI 210
+ KP GHG + L + GI K +++ G K Q +N L A+ + +
Sbjct: 228 QNKYKIQTKPHGHGDVHALLYSSGILKVWYEAGLKWVLFFQDTN-----GLLFKAIPSAL 282
Query: 211 GLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKF----GITRG 266
G+ K+ S A E I + + DG+ + +EY + D G G
Sbjct: 283 GVSAAKQYHVNSLAVPRKAKEAIGGITRLTHSDGRSM--VINVEYNQLDPLLRASGYPDG 340
Query: 267 PFSSNGLQADFPANTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSV 326
+ + FP N N L ++L G E S G + Y D T
Sbjct: 341 DVNCETGYSPFPGNINQLILEL------GHYIEELSKTGGAIQEFVNPKYKDA-SKTSFK 393
Query: 327 PGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLH 386
RLEC MQ+ S+R V ++T++ Y V ++A+ K + +
Sbjct: 394 SSTRLECMMQDYPKTL--PPSARVGFTV---METWLAYAP---VKNNAEDAAKVPKGNPY 445
Query: 387 QTPDGSFLDILRNAYDILCQCHIKL--PEIE-GNDKYIDDGPPYLILLHPALGLLWEVTR 443
+ + I R IL + +++ P ++ N + ++ P I P GL + +
Sbjct: 446 HSATSGEMAIYRANSIILRKAGVQVADPVVQVFNGQEVEVWP--RITWKPKWGLTFNRIK 503
Query: 444 QKFKGG-SVSKGSELQIEVAEFLWRNVQLDGSLIIVA-----ENVMGSTRIADNG 492
K G S+S S L I+ N+ +DG+LII A NV GS + +NG
Sbjct: 504 SKVSGNCSISLRSTLAIKGPNIFIENLSVDGALIIDAVDDAEVNVSGS--VQNNG 556
>sp|Q9C5I1|USP_ARATH UDP-sugar pyrophosphorylase OS=Arabidopsis thaliana GN=USP PE=1
SV=1
Length = 614
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 187/482 (38%), Gaps = 45/482 (9%)
Query: 10 VPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYC 69
VPSG +L+ T+ + G+ + GG +RLG + LP
Sbjct: 102 VPSGENLTFGTDNFIEMEKRGVVEARNAAFVLVAGGLGERLGY--NGIKVALPRETT--T 157
Query: 70 GRTLLEGLIRDLQAREFLYFKLY--GKQCITPVAIMTSSAKNNHERITSLCERLRWFGRG 127
G L+ I + A + K+ G + P IMTS + H R L E +FG
Sbjct: 158 GTCFLQHYIESILALQEASNKIDSDGSERDIPFIIMTSD--DTHSRTLDLLELNSYFGMK 215
Query: 128 QSSFQLFEQPLVPAVDAEDGQWLVMRP---FAPVCKPGGHGAIWKLAHDKGIFKWFHDNG 184
+ L +Q V +D D + L + P ++ KP GHG + L + G+ + + G
Sbjct: 216 PTQVHLLKQEKVACLDDNDAR-LALDPHNKYSIQTKPHGHGDVHSLLYSSGLLHKWLEAG 274
Query: 185 RKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDG 244
K Q +N + + A +G+ K+ S A E I + + ++DG
Sbjct: 275 LKWVLFFQDTNGLLFNAIP----ASLGVSATKQYHVNSLAVPRKAKEAIGGISKLTHVDG 330
Query: 245 KWAYGLSCIEYTEFDKF----GITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENE 300
+ + +EY + D G G + + FP N N L ++L G ++E
Sbjct: 331 RSM--VINVEYNQLDPLLRASGFPDGDVNCETGFSPFPGNINQLILEL------GPYKDE 382
Query: 301 RSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDT 360
G + Y D+ T RLEC MQ+ T +R V +D
Sbjct: 383 LQKTGGAIKEFVNPKYKDS-TKTAFKSSTRLECMMQDYPKTLPPT--ARVGFTV---MDI 436
Query: 361 FMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKY 420
++ Y + A K K H G + I R IL + +K +E K
Sbjct: 437 WLAYAPVKNNPEDAAKVPK--GNPYHSATSGE-MAIYRANSLILQKAGVK---VEEPVKQ 490
Query: 421 IDDGPPY----LILLHPALGLLWEVTRQKFKGG-SVSKGSELQIEVAEFLWRNVQLDGSL 475
+ +G I P G+++ ++K G VS+ S + I+ +++ LDG+L
Sbjct: 491 VLNGQEVEVWSRITWKPKWGMIFSDIKKKVSGNCEVSQRSTMAIKGRNVFIKDLSLDGAL 550
Query: 476 II 477
I+
Sbjct: 551 IV 552
>sp|A2YGP6|USP_ORYSI UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. indica GN=USP
PE=3 SV=2
Length = 616
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 107/483 (22%), Positives = 183/483 (37%), Gaps = 39/483 (8%)
Query: 10 VPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYC 69
VPSG L+ + G++ + GG +RLG + LP
Sbjct: 114 VPSGEVLTFGDDNFVSLEEAGVKEARHAAFVLVAGGLGERLGYKGIKV--ALPRETT--T 169
Query: 70 GRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQS 129
G+ L+ I + A + KL +C T + + ++ + + L E +FG S
Sbjct: 170 GKCFLQHYIESILALQEASCKLVEGECNTKIPFVIMTSDDTNALTVKLLESNSYFGMEPS 229
Query: 130 SFQLFEQPLVPAVDAEDGQWLVMRP---FAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRK 186
+ +Q V + D + L + P + KP GHG + L + G+ + + GRK
Sbjct: 230 QVHILKQEKVACLADNDAR-LALDPNDKYKIQTKPHGHGDVHALLYSSGLLEQWKSTGRK 288
Query: 187 GATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKW 246
Q +N + + + +G+ K S A E I + + ++DG+
Sbjct: 289 WVLFFQDTNGLLFNAIP----SALGVSATKGYNVNSLAVPRKAKEAIGGITKLTHVDGRT 344
Query: 247 AYGLSCIEYTEFDKF----GITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERS 302
+ +EY + D G G + + +P N N L +++ E +
Sbjct: 345 M--VINVEYNQLDPLLRATGHPDGDANCETGYSPYPGNINQLILEIGP-----YMEELQK 397
Query: 303 LPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFM 362
G + P Y D+ T RLEC MQ ++ T G +D ++
Sbjct: 398 THGAISEFVNP-KYTDS-TKTAFKSSTRLECMMQ----DYPKTLPPSAKVGFT-VMDAWL 450
Query: 363 VYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQ--CHIKLPEIEG-NDK 419
Y + A K K H G + I R IL + I P I+ N +
Sbjct: 451 AYAPVKNNPEDAAKVPK--GNPYHSATSGE-MAIYRANSLILRKAGAQIADPVIDTFNGQ 507
Query: 420 YIDDGPPYLILLHPALGLLWEVTRQKF-KGGSVSKGSELQIEVAEFLWRNVQLDGSLIIV 478
++ P I P GL+++ + K SVS+ S L I + + LDG+LI+
Sbjct: 508 EVEVWP--RITWIPRWGLIFKDVKAKVHSNSSVSQRSALVINGKNITIQGLSLDGTLIVN 565
Query: 479 AEN 481
A++
Sbjct: 566 AKD 568
>sp|Q5Z8Y4|USP_ORYSJ UDP-sugar pyrophosphorylase OS=Oryza sativa subsp. japonica GN=USP
PE=2 SV=1
Length = 616
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 106/483 (21%), Positives = 183/483 (37%), Gaps = 39/483 (8%)
Query: 10 VPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYC 69
VPSG L+ + G++ + GG +RLG + LP
Sbjct: 114 VPSGEVLTFGDDNFVSLEEAGVKEARHAAFVLVAGGLGERLGYKGIKV--ALPRETT--T 169
Query: 70 GRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQS 129
G+ L+ I + A + KL +C T + + ++ + + L E +FG S
Sbjct: 170 GKCFLQHYIESILALQEASCKLVEGECNTKIPFVIMTSDDTNALTVKLLESNSYFGMEPS 229
Query: 130 SFQLFEQPLVPAVDAEDGQWLVMRP---FAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRK 186
+ +Q V + D + L + P + KP GHG + L + G+ + + GRK
Sbjct: 230 QVHILKQEKVACLADNDAR-LALDPNDKYKIQTKPHGHGDVHALLYSSGLLEQWKSTGRK 288
Query: 187 GATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKW 246
Q +N + + + +G+ K S A E I + + ++DG+
Sbjct: 289 WVLFFQDTNGLLFNAIP----SALGVSATKGYNVNSLAVPRKAKEAIGGITKLTHVDGRT 344
Query: 247 AYGLSCIEYTEFDKF----GITRGPFSSNGLQADFPANTNILYVDLASAELVGSSENERS 302
+ +EY + D G G + + +P N N L +++ E +
Sbjct: 345 M--VINVEYNQLDPLLRATGHPDGDANCETGYSPYPGNINQLILEIGP-----YMEELQK 397
Query: 303 LPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFM 362
G + P Y D+ T RLEC MQ ++ T G +D ++
Sbjct: 398 THGAISEFVNP-KYTDS-TKTAFKSSTRLECMMQ----DYPKTLPPSAKVGFT-VMDAWL 450
Query: 363 VYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQ--CHIKLPEIEG-NDK 419
Y + + K K H G + I R IL + I P I+ N +
Sbjct: 451 TYAPVKNNPEDSAKVPK--GNPYHSATSGE-MAIYRANSLILRKAGAQIADPVIDTFNGQ 507
Query: 420 YIDDGPPYLILLHPALGLLWEVTRQKF-KGGSVSKGSELQIEVAEFLWRNVQLDGSLIIV 478
++ P I P GL+++ + K SVS+ S L I + + LDG+LI+
Sbjct: 508 EVEVWP--RITWIPRWGLIFKDVKAKVHSNSSVSQRSALVINGKNITIQGLSLDGTLIVN 565
Query: 479 AEN 481
A++
Sbjct: 566 AKD 568
>sp|Q6GEQ8|URTF_STAAR Probable uridylyltransferase SAR2262 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR2262 PE=3 SV=1
Length = 395
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 102 IMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKP 161
IMTS NHE + E +FG Q S F+Q + A+ +E GQ ++ + + P
Sbjct: 146 IMTSDI--NHEETLAYFESHNYFGYDQESIHFFKQDNIVAL-SEAGQLILNQQGRIMETP 202
Query: 162 GGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFA 221
G+G ++K G + +NG K + + NV+ L AG + H +
Sbjct: 203 NGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPL--FAGFTVEHDYDITSK 260
Query: 222 SCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFD 259
+ + G + G V ++ K+ + +EY+E D
Sbjct: 261 TIQPKPGESVGRLVNVDCKD---------TVLEYSELD 289
>sp|Q7A0A0|URTF_STAAW Probable uridylyltransferase MW2097 OS=Staphylococcus aureus
(strain MW2) GN=MW2097 PE=3 SV=1
Length = 395
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 102 IMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKP 161
IMTS NHE + E +FG Q + F+Q + A+ +E+G+ ++ + + P
Sbjct: 146 IMTSDI--NHEETLAYFEAHSYFGYDQEAIHFFKQDNIVAL-SEEGKLILNQQGRIMETP 202
Query: 162 GGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFA 221
G+G ++K G + +NG K + + NV+ L AG + H +
Sbjct: 203 NGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPL--FAGFTVEHDYDITSK 260
Query: 222 SCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFD 259
+ + G + G V ++ K+ + +EY+E D
Sbjct: 261 TIQPKPGESVGRLVNVDCKD---------TVLEYSELD 289
>sp|Q6G7E3|URTF_STAAS Probable uridylyltransferase SAS2072 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS2072 PE=3 SV=1
Length = 395
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 102 IMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKP 161
IMTS NHE + E +FG Q + F+Q + A+ +E+G+ ++ + + P
Sbjct: 146 IMTSDI--NHEETLAYFEAHSYFGYDQEAIHFFKQDNIVAL-SEEGKLILNQQGRIMETP 202
Query: 162 GGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFA 221
G+G ++K G + +NG K + + NV+ L AG + H +
Sbjct: 203 NGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPL--FAGFTVEHDYDITSK 260
Query: 222 SCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFD 259
+ + G + G V ++ K+ + +EY+E D
Sbjct: 261 TIQPKPGESVGRLVNVDCKD---------TVLEYSELD 289
>sp|Q7A4A4|URTF_STAAN Probable uridylyltransferase SA1974 OS=Staphylococcus aureus
(strain N315) GN=SA1974 PE=1 SV=1
Length = 395
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 102 IMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKP 161
IMTS NHE + E +FG Q + F+Q + A+ +E+G+ ++ + + P
Sbjct: 146 IMTSDI--NHEETLAYFEAHSYFGYDQEAIHFFKQDNIVAL-SEEGKLILNQQGRIMETP 202
Query: 162 GGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFA 221
G+G ++K G + +NG K + + NV+ L AG + H +
Sbjct: 203 NGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPL--FAGFTVEHDYDITSK 260
Query: 222 SCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFD 259
+ + G + G V ++ K+ + +EY+E D
Sbjct: 261 TIQPKPGESVGRLVNVDCKD---------TVLEYSELD 289
>sp|Q99S95|URTF_STAAM Probable uridylyltransferase SAV2171 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV2171 PE=1 SV=1
Length = 395
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 102 IMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKP 161
IMTS NHE + E +FG Q + F+Q + A+ +E+G+ ++ + + P
Sbjct: 146 IMTSDI--NHEETLAYFEAHSYFGYDQEAIHFFKQDNIVAL-SEEGKLILNQQGRIMETP 202
Query: 162 GGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFA 221
G+G ++K G + +NG K + + NV+ L AG + H +
Sbjct: 203 NGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPL--FAGFTVEHDYDITSK 260
Query: 222 SCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFD 259
+ + G + G V ++ K+ + +EY+E D
Sbjct: 261 TIQPKPGESVGRLVNVDCKD---------TVLEYSELD 289
>sp|Q5HE34|URTF_STAAC Probable uridylyltransferase SACOL2161 OS=Staphylococcus aureus
(strain COL) GN=SACOL2161 PE=3 SV=1
Length = 395
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 102 IMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKP 161
IMTS NHE + E +FG Q + F+Q + A+ +E+G+ ++ + + P
Sbjct: 146 IMTSDI--NHEETLAYFEAHSYFGYDQEAIHFFKQDNIVAL-SEEGKLILNQQGRIMETP 202
Query: 162 GGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFA 221
G+G ++K G + +NG K + + NV+ L AG + H +
Sbjct: 203 NGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVRVLDPL--FAGFTVEHDYDITSK 260
Query: 222 SCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFD 259
+ + G + G V ++ K+ + +EY+E D
Sbjct: 261 TIQPKPGESVGRLVNVDCKD---------TVLEYSELD 289
>sp|Q2FW81|URTF_STAA8 Probable uridylyltransferase SAOUHSC_02423 OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_02423 PE=3 SV=1
Length = 395
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 102 IMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKP 161
IMTS NHE + E +FG Q + F+Q + A+ +E+G+ ++ + + P
Sbjct: 146 IMTSDI--NHEETLAYFEAHSYFGYDQEAIHFFKQDNIVAL-SEEGKLILNQQGRIMETP 202
Query: 162 GGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFA 221
G+G ++K G + +NG K + + NV+ L AG + H +
Sbjct: 203 NGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVRVLDPL--FAGFTVEHDYDITSK 260
Query: 222 SCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFD 259
+ + G + G V ++ K+ + +EY+E D
Sbjct: 261 TIQPKPGESVGRLVNVDCKD---------TVLEYSELD 289
>sp|Q2FEW1|URTF_STAA3 Probable uridylyltransferase SAUSA300_2130 OS=Staphylococcus aureus
(strain USA300) GN=SAUSA300_2130 PE=3 SV=1
Length = 395
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 70/158 (44%), Gaps = 14/158 (8%)
Query: 102 IMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKP 161
IMTS NHE + E +FG Q + F+Q + A+ +E+G+ ++ + + P
Sbjct: 146 IMTSDI--NHEETLAYFEAHSYFGYDQEAIHFFKQDNIVAL-SEEGKLILNQQGRIMETP 202
Query: 162 GGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFA 221
G+G ++K G + +NG K + + NV+ L AG + H +
Sbjct: 203 NGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVRVLDPL--FAGFTVEHDYDITSK 260
Query: 222 SCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFD 259
+ + G + G V ++ K+ + +EY+E D
Sbjct: 261 TIQPKPGESVGRLVNVDCKD---------TVLEYSELD 289
>sp|Q54GN5|UAP1_DICDI Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Dictyostelium
discoideum GN=uap1 PE=3 SV=1
Length = 487
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 102 IMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKP 161
IMTS A H E +FG +S+F F Q ++P + EDG+ + P
Sbjct: 166 IMTSEA--THSETIKFFENKNYFGLKKSAFFFFSQAMIPCITPEDGKIISESGSKLSLSP 223
Query: 162 GGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVV 197
G+G ++K G G K T V N++
Sbjct: 224 NGNGGLFKALSTSGAIDDMRKKGIKYVTQYCVDNIL 259
>sp|Q2YYH4|URTF_STAAB Probable uridylyltransferase SAB2052c OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB2052c PE=3 SV=1
Length = 395
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 14/158 (8%)
Query: 102 IMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKP 161
IM S NHE + E +FG Q + F+Q + A+ +E+G+ ++ + + P
Sbjct: 146 IMISDI--NHEETLAYFEAHSYFGYDQEAIHFFKQDNIVAL-SEEGKLILNQQGRIMETP 202
Query: 162 GGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFA 221
G+G ++K G + +NG K + + NV+ L AG + H +
Sbjct: 203 NGNGGVFKSLDKAGYLEEMSNNGVKYIFLNNIDNVLVKVLDPL--FAGFTVEHDYDITSK 260
Query: 222 SCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFD 259
+ + G + G V ++ K+ + +EY+E D
Sbjct: 261 TIQPKPGESVGRLVNVDCKD---------TVLEYSELD 289
>sp|Q16222|UAP1_HUMAN UDP-N-acetylhexosamine pyrophosphorylase OS=Homo sapiens GN=UAP1
PE=1 SV=3
Length = 522
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 97/243 (39%), Gaps = 32/243 (13%)
Query: 25 QAALWGIEGLPELGE-----IYPLGGSADRLGLVDHETGECLPAAM----LPYCGRTLLE 75
Q W EGL ++ + + GG RLG+ P M LP +TL +
Sbjct: 86 QLQAWESEGLFQISQNKVAVLLLAGGQGTRLGV-------AYPKGMYDVGLP-SRKTLFQ 137
Query: 76 GLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFE 135
+ + + K YG +CI P IMTS E + ++FG + + F+
Sbjct: 138 IQAERILKLQQVAEKYYGNKCIIPWYIMTSG--RTMESTKEFFTKHKYFGLKKENVIFFQ 195
Query: 136 QPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSN 195
Q ++PA+ + DG+ ++ P G+G +++ + I + G V V N
Sbjct: 196 QGMLPAM-SFDGKIILEEKNKVSMAPDGNGGLYRALAAQNIVEDMEQRGIWSIHVYCVDN 254
Query: 196 V-VAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIE 254
+ V D + G + G G A + TE + V+ +DG + +E
Sbjct: 255 ILVKVADPRFI---GFCIQKGADCG-AKVVEKTNPTEPVGVVCR---VDGVY----QVVE 303
Query: 255 YTE 257
Y+E
Sbjct: 304 YSE 306
>sp|Q4L846|URTF_STAHJ Probable uridylyltransferase SH0870 OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=SH0870 PE=3 SV=1
Length = 395
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 66/171 (38%), Gaps = 18/171 (10%)
Query: 30 GIEGLP--ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFL 87
GIE + E + GG RLG P G +L E LQAR+ L
Sbjct: 85 GIEAIRNGEFAVLLMAGGQGTRLGYKG-------PKGSFEIKGVSLFE-----LQARQLL 132
Query: 88 YFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDG 147
K I IMTS NHE S E+ +FG + F+Q + A+ E G
Sbjct: 133 KLKKETGHLINWY-IMTSDI--NHEETLSYFEQHDYFGYNPDNVHFFKQENMVAL-CETG 188
Query: 148 QWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVA 198
Q ++ + P G+G ++K G +G K + + NV+
Sbjct: 189 QLVLNEQGYIMETPNGNGGVFKSLEKNGYLDKMASDGVKFIFLNNIDNVLV 239
>sp|O64765|UAP1_ARATH Probable UDP-N-acetylglucosamine pyrophosphorylase OS=Arabidopsis
thaliana GN=At2g35020 PE=2 SV=1
Length = 502
Score = 42.0 bits (97), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 93/236 (39%), Gaps = 32/236 (13%)
Query: 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQ 95
+LG + GG RLG D + C LP G++L + +QA L + Q
Sbjct: 124 KLGVVLLSGGQGTRLGSSDPKG--CYNIG-LP-SGKSLFQ-----IQAERILCVQRLASQ 174
Query: 96 CIT------PVAI----MTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAE 145
++ PV I MTS HE + ++FG F+Q +P + ++
Sbjct: 175 AMSEASPTRPVTIQWYIMTSPF--THEPTQKFFKSHKYFGLEPDQVTFFQQGTLPCI-SK 231
Query: 146 DGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNV-VAATDLTL 204
DG++++ PF+ P G+G ++ + + G K V NV V D T
Sbjct: 232 DGKFIMETPFSLSKAPDGNGGVYTALKSSRLLEDMASRGIKYVDCYGVDNVLVRVADPTF 291
Query: 205 LALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDK 260
L A R + E + V + + GK L+ +EYTE D+
Sbjct: 292 LGY----FIDKSAASAAKVVRKAYPQEKVGVFVRR----GKGG-PLTVVEYTELDQ 338
>sp|Q28CH3|UAP1L_XENTR UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Xenopus
tropicalis GN=uap1l1 PE=2 SV=1
Length = 511
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 7/154 (4%)
Query: 44 GGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIM 103
GG RLG V + G + + LP +TL + ++ + L + +G+ C P IM
Sbjct: 119 GGQGTRLG-VTYPKG--MYSVGLP-SAKTLYQIQAERIRRLQQLASERHGETCTVPWYIM 174
Query: 104 TSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGG 163
TS R E +FG +S +FEQ ++PAV DG ++ P G
Sbjct: 175 TSEFTLGPTR--KFFEDHAYFGLERSDVVMFEQRMLPAVGF-DGAAILEDKAKLAMAPDG 231
Query: 164 HGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVV 197
+G +++ D I + G + V V N++
Sbjct: 232 NGGLYRALSDNRILEDMEGRGIQYVHVYCVDNIL 265
>sp|P43123|UAP1_YEAST UDP-N-acetylglucosamine pyrophosphorylase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=QRI1 PE=1
SV=1
Length = 477
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 5/146 (3%)
Query: 94 KQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMR 153
K+ P IMTS + + +FG + F Q +PA D +L+
Sbjct: 154 KKVEIPWYIMTSGP--TRAATEAYFQEHNYFGLNKEQITFFNQGTLPAFDLTGKHFLMKD 211
Query: 154 PFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLH 213
P P G+G +++ + + + F G K + V NV++ + G +
Sbjct: 212 PVNLSQSPDGNGGLYRAIKENKLNEDFDRRGIKHVYMYCVDNVLSK--IADPVFIGFAIK 269
Query: 214 HGKKLGFASCKRSSGATEGINVLIEK 239
HG +L + R A E + ++ K
Sbjct: 270 HGFELATKAV-RKRDAHESVGLIATK 294
>sp|Q7ZWD4|UAP1L_DANRE UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 OS=Danio
rerio GN=uap1l1 PE=2 SV=1
Length = 505
Score = 37.4 bits (85), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 28/162 (17%)
Query: 29 WGIEGLPELGE-----IYPLGGSADRLGLVDHETGECLPAAM----LPYCGRTLLEGLIR 79
W EGL ++ + + GG RLG+ P M LP G+TL +
Sbjct: 92 WENEGLLQISQDRVAVLLLAGGQGTRLGV-------SYPKGMYNVGLP-SGKTLYQIQAE 143
Query: 80 DLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERL----RWFGRGQSSFQLFE 135
+Q + L +G +C P IMTS E E+ ++FG S+ +FE
Sbjct: 144 RIQKVQELANVRHGCRCTVPWYIMTS------EFTLGPTEKFFKDNKYFGLCPSNVVMFE 197
Query: 136 QPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIF 177
Q ++PAV DG+ ++ + P G+G +++ D I
Sbjct: 198 QRMIPAVGF-DGKIILEKKNKIAMAPDGNGGLYRSLVDNKIL 238
>sp|B2S2I7|RL7_TREPS 50S ribosomal protein L7/L12 OS=Treponema pallidum subsp. pallidum
(strain SS14) GN=rplL PE=3 SV=1
Length = 129
Score = 34.7 bits (78), Expect = 2.5, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 126 RGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKG--IFKWFHDN 183
RG++ +L E L+ AV+ E G + P APV + GG G++ + + K +
Sbjct: 14 RGKTILELSE--LIKAVEEEFGVTAAV-PVAPVAEGGGAGSVAAEEQTEFTVVLKGLAEP 70
Query: 184 GRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKL 218
G+K A +++V NV+ +G+GL K L
Sbjct: 71 GKKIAVIKEVRNVI----------SGLGLKEAKDL 95
>sp|O83268|RL7_TREPA 50S ribosomal protein L7/L12 OS=Treponema pallidum (strain Nichols)
GN=rplL PE=3 SV=1
Length = 129
Score = 34.7 bits (78), Expect = 2.5, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 126 RGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKG--IFKWFHDN 183
RG++ +L E L+ AV+ E G + P APV + GG G++ + + K +
Sbjct: 14 RGKTILELSE--LIKAVEEEFGVTAAV-PVAPVAEGGGAGSVAAEEQTEFTVVLKGLAEP 70
Query: 184 GRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKL 218
G+K A +++V NV+ +G+GL K L
Sbjct: 71 GKKIAVIKEVRNVI----------SGLGLKEAKDL 95
>sp|Q8BP56|ATHL1_MOUSE Acid trehalase-like protein 1 OS=Mus musculus GN=Athl1 PE=2 SV=1
Length = 690
Score = 33.5 bits (75), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 426 PYLILLHPALGLLWEVTRQKFKGGSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGS 485
P +++ HP R + GG++ G L + A+F W + L + E++ G+
Sbjct: 307 PNILMFHPEAARAILEYRVRTLGGALKNGQNLGYQGAKFAWESAST--GLEVCPEDIYGT 364
Query: 486 TRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCGDNT--YWKHDVQW 533
I NG L ++ + K+ + WD + +W V+W
Sbjct: 365 QEIHINGAVAL--AFQLYYYYTQDSKLFQEDGGWDVVSSVAEFWCSRVEW 412
>sp|Q8TLI4|SYV_METAC Valine--tRNA ligase OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=valS PE=3 SV=1
Length = 869
Score = 33.1 bits (74), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 21/96 (21%)
Query: 42 PLGGSADRLGLVDHETGECLPAAMLPYCGRTLLE---GLIRDLQAREFLYFKLYGKQ--- 95
PL + D+ G + G+ Y G TL E +I DL+A FLY + +Q
Sbjct: 285 PLVKALDKQGRMTKAAGK--------YEGMTLAECREAVIADLKAAGFLYDQKSLEQNVG 336
Query: 96 ----CITPVAIMTSS---AKNNHERITSLCERLRWF 124
C TP+ I++ K NHE I + ++W+
Sbjct: 337 LCWRCDTPIEILSEPQWFVKINHEGILKAADEIKWY 372
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 244,214,113
Number of Sequences: 539616
Number of extensions: 10881029
Number of successful extensions: 20693
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 20670
Number of HSP's gapped (non-prelim): 34
length of query: 612
length of database: 191,569,459
effective HSP length: 123
effective length of query: 489
effective length of database: 125,196,691
effective search space: 61221181899
effective search space used: 61221181899
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)