Query 007226
Match_columns 612
No_of_seqs 245 out of 670
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 20:24:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ogz_A UDP-sugar pyrophosphory 100.0 3E-102 9E-107 865.3 32.3 485 8-550 86-619 (630)
2 3gue_A UTP-glucose-1-phosphate 100.0 1.6E-86 5.5E-91 723.7 23.0 394 29-494 69-475 (484)
3 3r3i_A UTP--glucose-1-phosphat 100.0 4E-83 1.4E-87 701.5 28.0 380 31-494 122-513 (528)
4 2oeg_A UTP-glucose-1-phosphate 100.0 2.3E-81 8E-86 690.4 18.4 406 29-521 68-490 (505)
5 3oc9_A UDP-N-acetylglucosamine 100.0 8.8E-79 3E-83 652.9 32.4 355 23-426 20-382 (405)
6 2yqc_A UDP-N-acetylglucosamine 100.0 4.5E-77 1.6E-81 656.0 28.0 382 10-434 72-470 (486)
7 1jv1_A Glcnac1P uridyltransfer 100.0 1.3E-71 4.4E-76 614.9 32.2 361 9-411 71-440 (505)
8 2icy_A Probable UTP-glucose-1- 100.0 5.2E-71 1.8E-75 605.0 25.8 399 10-494 52-457 (469)
9 2i5k_A UTP--glucose-1-phosphat 100.0 6.9E-70 2.4E-74 598.9 28.6 381 30-493 86-472 (488)
10 3st8_A Bifunctional protein GL 98.5 1.4E-06 4.9E-11 95.5 14.7 192 35-297 11-204 (501)
11 3oam_A 3-deoxy-manno-octuloson 97.8 0.00015 5.1E-09 72.4 12.5 191 36-296 2-197 (252)
12 3brk_X Glucose-1-phosphate ade 97.7 0.0019 6.5E-08 68.9 20.3 203 35-296 11-221 (420)
13 4ecm_A Glucose-1-phosphate thy 97.7 0.00076 2.6E-08 67.7 15.3 178 36-292 24-204 (269)
14 1yp2_A Glucose-1-phosphate ade 97.5 0.0015 5.2E-08 70.1 15.8 211 36-297 20-246 (451)
15 3juk_A UDP-glucose pyrophospho 97.5 0.0014 4.9E-08 65.8 14.5 64 37-121 3-69 (281)
16 1fxo_A Glucose-1-phosphate thy 97.5 0.0021 7E-08 65.8 15.8 180 37-294 3-186 (293)
17 4fce_A Bifunctional protein GL 97.4 0.0015 5.2E-08 69.8 14.9 180 36-296 8-188 (459)
18 3tqd_A 3-deoxy-manno-octuloson 97.4 0.0057 1.9E-07 61.6 18.1 189 36-296 9-206 (256)
19 2qh5_A PMI, ALGA, mannose-6-ph 97.4 0.00053 1.8E-08 70.4 9.9 192 36-296 4-203 (308)
20 2v0h_A Bifunctional protein GL 97.2 0.0036 1.2E-07 66.8 14.0 180 36-296 5-185 (456)
21 3k8d_A 3-deoxy-manno-octuloson 97.2 0.0028 9.5E-08 64.2 12.2 189 36-296 18-213 (264)
22 1lvw_A Glucose-1-phosphate thy 97.1 0.0086 3E-07 61.3 15.9 180 37-294 4-187 (295)
23 1hm9_A GLMU, UDP-N-acetylgluco 97.0 0.006 2.1E-07 65.5 13.9 181 38-296 13-194 (468)
24 3pnn_A Conserved domain protei 96.9 0.022 7.5E-07 58.3 16.4 212 36-294 5-228 (303)
25 1qwj_A Cytidine monophospho-N- 96.9 0.0076 2.6E-07 58.8 12.4 129 36-222 3-131 (229)
26 2wee_A MOBA-related protein; u 96.9 0.00062 2.1E-08 64.1 4.0 106 36-200 5-111 (197)
27 4fcu_A 3-deoxy-manno-octuloson 96.8 0.027 9.3E-07 56.5 16.1 186 37-295 2-197 (253)
28 1tzf_A Glucose-1-phosphate cyt 96.8 0.00092 3.1E-08 65.9 5.1 191 37-291 3-199 (259)
29 2waw_A MOBA relate protein; un 96.8 0.00055 1.9E-08 64.4 3.4 106 36-200 5-111 (199)
30 2xwl_A 2-C-methyl-D-erythritol 96.8 0.0012 4E-08 63.5 5.3 54 36-106 2-55 (223)
31 3q80_A 2-C-methyl-D-erythritol 96.8 0.0013 4.5E-08 65.3 5.7 64 36-118 7-70 (231)
32 1vgw_A 4-diphosphocytidyl-2C-m 96.7 0.00087 3E-08 64.9 3.8 64 36-120 6-69 (231)
33 1ezi_A CMP-N-acetylneuraminic 96.7 0.0023 7.7E-08 62.1 6.6 127 36-222 4-133 (228)
34 3f1c_A Putative 2-C-methyl-D-e 96.6 0.0014 4.9E-08 64.8 4.7 113 36-200 3-120 (246)
35 1mc3_A Glucose-1-phosphate thy 96.5 0.0026 9E-08 65.2 6.0 180 37-294 4-187 (296)
36 3rsb_A Adenosylcobinamide-phos 96.5 0.0013 4.3E-08 62.3 3.3 61 38-120 2-62 (196)
37 2yc3_A 2-C-methyl-D-erythritol 96.5 0.0012 4.2E-08 63.8 3.1 54 36-106 4-57 (228)
38 1i52_A 4-diphosphocytidyl-2-C- 96.4 0.0014 4.9E-08 63.9 3.2 54 36-106 7-60 (236)
39 1vpa_A 2-C-methyl-D-erythritol 96.4 0.0017 5.7E-08 63.1 3.5 54 36-106 13-66 (234)
40 1h7e_A 3-deoxy-manno-octuloson 96.3 0.0033 1.1E-07 61.4 5.4 181 36-295 2-187 (245)
41 3d5n_A Q97W15_sulso; NESG, SSR 96.3 0.0017 5.9E-08 62.1 3.0 48 36-106 2-49 (197)
42 2vsh_A TARI, 2-C-methyl-D-eryt 96.3 0.0025 8.4E-08 61.7 4.0 65 37-120 3-68 (236)
43 1e5k_A Molybdopterin-guanine d 96.2 0.0027 9.4E-08 61.0 4.0 51 36-106 6-56 (201)
44 1jyk_A LICC protein, CTP:phosp 96.2 0.0029 9.9E-08 63.1 4.0 63 36-119 25-90 (254)
45 2px7_A 2-C-methyl-D-erythritol 96.0 0.0031 1.1E-07 62.0 3.0 37 36-80 25-61 (236)
46 3ngw_A Molybdopterin-guanine d 95.9 0.0025 8.5E-08 62.1 2.2 37 37-82 1-37 (208)
47 1vic_A 3-deoxy-manno-octuloson 95.9 0.0085 2.9E-07 59.6 5.7 126 36-222 2-127 (262)
48 2y6p_A 3-deoxy-manno-octuloson 95.8 0.004 1.4E-07 60.3 3.1 178 36-296 2-182 (234)
49 4evw_A Nucleoside-diphosphate- 95.7 0.0025 8.6E-08 63.8 1.1 61 39-120 2-65 (255)
50 2e3d_A UTP--glucose-1-phosphat 95.6 0.0094 3.2E-07 60.5 5.2 64 36-120 8-74 (302)
51 2ux8_A Glucose-1-phosphate uri 95.4 0.01 3.4E-07 60.2 4.5 64 36-120 14-80 (297)
52 2e8b_A Probable molybdopterin- 95.3 0.0021 7.3E-08 61.6 -1.1 50 36-106 14-63 (201)
53 2xme_A CTP-inositol-1-phosphat 95.2 0.007 2.4E-07 58.9 2.4 42 34-83 16-57 (232)
54 2pa4_A UTP-glucose-1-phosphate 95.2 0.012 4E-07 60.7 4.1 62 37-119 13-77 (323)
55 2x65_A Mannose-1-phosphate gua 94.8 0.013 4.3E-07 61.3 3.2 64 38-119 3-70 (336)
56 1w55_A ISPD/ISPF bifunctional 94.6 0.016 5.5E-07 61.6 3.3 41 36-83 3-43 (371)
57 2cu2_A Putative mannose-1-phos 93.6 0.034 1.1E-06 58.0 3.4 42 37-84 3-48 (337)
58 2dpw_A Hypothetical protein TT 93.1 0.049 1.7E-06 53.2 3.4 41 36-84 2-45 (232)
59 2ggo_A 401AA long hypothetical 93.1 0.04 1.4E-06 57.8 2.9 59 38-120 2-63 (401)
60 3jtz_A Integrase; four strande 39.7 31 0.001 28.9 4.4 32 573-609 22-53 (88)
61 2qjv_A Uncharacterized IOLB-li 37.4 64 0.0022 32.7 7.0 73 511-583 20-111 (270)
62 3cfu_A Uncharacterized lipopro 31.5 94 0.0032 28.7 6.7 62 504-566 47-116 (159)
63 1hg8_A Endopolygalacturonase; 29.0 4.3E+02 0.015 27.0 12.1 76 501-577 173-253 (349)
64 3pet_A Putative adhesin; right 28.0 2.3E+02 0.0077 27.0 9.1 51 533-583 147-205 (221)
65 3sft_A CHEB, chemotaxis respon 26.7 51 0.0018 31.6 4.1 66 521-593 42-111 (193)
66 1chd_A CHEB methylesterase; ch 26.0 53 0.0018 31.8 4.1 42 552-593 72-113 (203)
67 2k6w_A Putative uncharacterize 25.9 1.3E+02 0.0045 26.5 6.3 48 560-609 67-115 (120)
68 3es4_A Uncharacterized protein 25.7 1.1E+02 0.0038 26.9 5.7 51 518-569 46-99 (116)
69 3ju0_A Phage integrase; four s 25.3 86 0.0029 27.2 4.9 30 575-609 24-53 (108)
70 2oyz_A UPF0345 protein VPA0057 21.4 1.2E+02 0.0041 25.9 4.9 42 527-572 35-83 (94)
71 3jx8_A Putative lipoprotein; s 20.9 5.6E+02 0.019 24.6 11.5 78 503-583 149-234 (250)
No 1
>3ogz_A UDP-sugar pyrophosphorylase; LEFT handed beta helix, rossmann fold, UDP sugar pyrophospho transferase; 2.03A {Leishmania major} PDB: 3oh3_A* 3oh1_A* 3oh0_A* 3oh2_A* 3oh4_A*
Probab=100.00 E-value=2.6e-102 Score=865.33 Aligned_cols=485 Identities=19% Similarity=0.158 Sum_probs=416.5
Q ss_pred eeCCCccccCCChHHHHHHHHhhhhhcCcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHH
Q 007226 8 IHVPSGLDLSQNTEYAAQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFL 87 (612)
Q Consensus 8 ~~vP~g~~l~~~~~~~~~~~~~Gl~~l~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~l 87 (612)
|.+|.+..++.+++...+++++|+++|+|+|||+||||||||||+++||+ +||++++ +|+||||++++||++
T Consensus 86 P~~~~~~~l~~~~~~~~~~~~~Gl~~i~kvavvllaGGlGTRLG~~~pK~--~lpv~~~--s~ks~lql~~e~i~~---- 157 (630)
T 3ogz_A 86 PLIFEAPSLHRRTAERTALENAGTAMLCKTVFVLVAGGLGERLGYSSIKV--SLPVETA--TNTTYLAYYLRWAQR---- 157 (630)
T ss_dssp SCEEECCCTTCCCHHHHHHHHHHHHHGGGEEEEEECCCEEGGGTEEEEGG--GSBSCTT--TCCBHHHHHHHHHHH----
T ss_pred CCCCccccccCCHHHHHHHHHHhHHHHhhceEEEecCCcccccCCCCCcc--cceecCC--CCCcHHHHHHHHHHH----
Confidence 55677988988888888899999999999999999999999999999999 9999977 999999999999992
Q ss_pred hHhhcCCcceeeEEEecCCCCCchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchH
Q 007226 88 YFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAI 167 (612)
Q Consensus 88 a~k~~g~~~~iPl~IMTS~~~~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI 167 (612)
++| +.|||+||||+ +||++|++||++ ||++++||++|+|+++||+++++|+++++++++++|+|+||||+
T Consensus 158 ---~~g--~~iPl~IMTS~--~T~~~T~~~~~~---fgl~~~~V~~F~Q~~~P~i~~~~g~l~l~~~~~i~~~P~GhGdv 227 (630)
T 3ogz_A 158 ---VGG--KEVPFVIMTSD--DTHDRTLQLLRE---LQLEVPNLHVLKQGQVFCFADSAAHLALDETGKLLRKPHGHGDV 227 (630)
T ss_dssp ---HHC--TTCCEEEEECT--TTHHHHHHHHHH---TTCCCTTEEEEECCCEECBSSTTCCBCBCTTSSBCEECCCTTHH
T ss_pred ---HhC--CCCcEEEEecc--cchHHHHHHHHH---hCCCcccEEEEEcCCEEEEecCCCceeecCCCcccCCCCCCHHH
Confidence 346 79999999999 799999999999 99999999999999999998788999999999999999999999
Q ss_pred hHHHHhcC------------------chhHHHHCCcEEEEEEecCCCcccc-chhhHHHhhhhhhcCCceeEEEEeecCC
Q 007226 168 WKLAHDKG------------------IFKWFHDNGRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSG 228 (612)
Q Consensus 168 ~~aL~~sG------------------lLd~l~~~Gikyv~v~~vDN~la~~-Dp~i~~~~G~~~~~~~~~~~~~v~rK~~ 228 (612)
|.+|+++| +|++|+++|++|+||+||||+|+++ ||.| +|+++.++++|++++|+| .
T Consensus 228 ~~aL~~sG~~~~~~~~~~~~~~~~~~lLd~l~~~Gieyi~v~~vDN~L~~~~DP~~---lG~~~~~~~d~~~kvv~r--~ 302 (630)
T 3ogz_A 228 HSLIYNATVKRDVVPDSGDGTATAQPLVNDWLAAGYESIVFIQDTNAGATITIPIS---LALSAEHSLDMNFTCIPR--V 302 (630)
T ss_dssp HHHHHHCBC--------------CCBHHHHHHHTTCCEEEEECTTBTTHHHHHHHH---HHHHHHTTCSEEEEEECC--C
T ss_pred HHHHHHcCCCcccccccccccccHHHHHHHHHHcCCEEEEEEccCCccccccCHHH---hHHHHhcCCCEEEEEEEC--C
Confidence 99999999 9999999999999999999999887 9966 899999999999998765 3
Q ss_pred CcccceEEEEEecCCCceecceEEEEecccCccCcC----CCC-CCCCCccccccceeeEEEEeHHHHHhhhcccccCCc
Q 007226 229 ATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGIT----RGP-FSSNGLQADFPANTNILYVDLASAELVGSSENERSL 303 (612)
Q Consensus 229 ~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~----~~~-~~dg~~~s~f~~Ninnl~~~L~~l~~~l~~~~~~~l 303 (612)
++|++|++|+.++.||++ ++++||||||++++.+. +++ +.+.++++.||+|||||||+|++|.+.+.. ..+.+
T Consensus 303 p~E~vG~l~~~~~~dGk~-~~v~vVEYsei~~~~~~~~~~~g~~~~~~~~~~~f~GNtNnl~~~L~a~~~~l~~-~~~~i 380 (630)
T 3ogz_A 303 PKEPIGLLCRTKKNSGDP-WLVANVEYNVFAEVSRALNKDGGDEVSDPTGFSPFPGSVNTLVFKLSSYVDRLRE-SHGIV 380 (630)
T ss_dssp SSCSSCEEEEEESSTTSC-CEEEEECHHHHHHHHHHC------------CCCSSCEEEEEEEEEHHHHHHHHHH-HTTCC
T ss_pred CCcceeeEEEEecCCCce-eeeeEEEeccCCHhHhhccCCCccccccccccccccccceeeeEEHHHHHHHHHh-ccCcc
Confidence 678889999855679981 13478999999998643 233 444555889999999999999999988876 67889
Q ss_pred cceeeecCCCceeecCCCCccccCceeeccchhhhhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCC
Q 007226 304 PGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADM 383 (612)
Q Consensus 304 p~~ian~Kk~i~y~D~~g~~~~~~~~rLE~~Mqd~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~ 383 (612)
|.++ |+| |+|+.+ +.+++++||||||||++++|+. ...++++++++| .+|+||||+..+|++|++++
T Consensus 381 p~~v-NpK----~~d~~~-~~~~~~~qLEt~m~d~~~~F~~----~~~~v~~~~V~R-~~F~PVKn~~~~a~~k~~~g-- 447 (630)
T 3ogz_A 381 PEFI-NPK----YSDETR-RSFKKPARIESLMQDIALLFSE----DDYRVGGTVFER-FSYQPVKNSLEEAAGLVAQG-- 447 (630)
T ss_dssp CCEE-CCC----BSSSSS-CCBSSCBCEECCGGGGGGGCCT----TTCCEEEEECCG-GGCCBCCBCHHHHHHHHHTT--
T ss_pred ceec-CCc----ccCCcc-cccCcchhhhhHHHHHHHhccc----cCcceeEEEECC-CeeecccCChhHhhhhhccC--
Confidence 9666 988 999874 5788999999999999999852 233789999999 89999999999988887765
Q ss_pred CCCCChhhhHHHHHHHHHHHHHHcCcccCc---cc---CCCc-ccccCCCeeEEeCCccccc--HHHHhcccCC--C-Cc
Q 007226 384 SLHQTPDGSFLDILRNAYDILCQCHIKLPE---IE---GNDK-YIDDGPPYLILLHPALGLL--WEVTRQKFKG--G-SV 451 (612)
Q Consensus 384 ~~~~sp~s~~~dl~~~~~~~l~~~g~~v~~---~~---~~~~-~~~~~P~~~v~l~p~~~~~--~~~~~~k~~~--~-si 451 (612)
.+++||+|+++|+|+++++||++||++++. ++ +++. +++.+|+ |.|+|+|+++ ++++++||++ + +|
T Consensus 448 ~~~~sp~t~~~dly~~~~~~L~~aG~~v~~~~~~~~~~~~~~~~~~~~P~--i~l~p~~~~~~~~~~~~~k~~~~~~~~i 525 (630)
T 3ogz_A 448 NGAYCAATGEAAFYELQRRRLKAIGLPLFYSSQPEVTVAKDAFGVRLFPI--IVLDTVCASSGSLDDLARVFPTPEKVHI 525 (630)
T ss_dssp CCCCBHHHHHHHHHHHHHHHHHHTTCCCCCCCSCSEEETTTTEEECCCSE--EEECHHHHTTCCHHHHHHHCSSGGGEEE
T ss_pred CCcCChHHHHHHHHHHHHHHHHHcCceecccccchhhhhcCccccCCCCE--EEEeccccccccHHHHHHHhCCCCCcee
Confidence 456799999999999999999999999884 22 4666 7889996 9999999999 9999999999 5 89
Q ss_pred CCCcEEEEEeceEEEeceEEEEEEEEEeccCCCCceecCCCcceeeccceeceEEEeeeEEeeCcEEeeeC----CC---
Q 007226 452 SKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGESILQYGYRCGRCKLNNVKVLNKGIDWDCG----DN--- 524 (612)
Q Consensus 452 ~~~s~L~veG~~~~~~~v~ldG~l~I~a~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~V~N~G~~~~~~----~~--- 524 (612)
+++|+|+|+|+ ++|+||+|||+|+|.|++ |+.. .+ .|++++ +|+|+||+|.++ +.
T Consensus 526 ~~~S~L~veg~-v~~~~l~LdG~lvI~a~~--~~~~-----~~---------~v~~~~-~v~n~g~~~~~~~~~~~~~~~ 587 (630)
T 3ogz_A 526 DQHSTLIVEGR-VIIESLELYGALTIRGPT--DSMA-----LP---------HVVRNA-VVRNAGWSVHAILSLCAGRDS 587 (630)
T ss_dssp CTTCEEEEESS-EEESCEEEESEEEEECCS--STTS-----CC---------EEECSE-EEECCCCEEEECCTTC----C
T ss_pred cCCcEEEEEEE-EEEEEEEEeeEEEEEcCC--CCcc-----Cc---------eEEecc-eEecCCcEEEEcccccccccC
Confidence 99999999999 999999999999999998 5522 22 288888 999999999999 31
Q ss_pred ------ceecccceeeeEEEEEEeccceeEee
Q 007226 525 ------TYWKHDVQWFEALKVILHGNAEFEAS 550 (612)
Q Consensus 525 ------~~w~~~~~r~e~~~i~~~g~~~f~a~ 550 (612)
+++...+.|.|.+.+.+.-++|++|.
T Consensus 588 ~~~~~~~irg~~~~~~e~~~~~~~~~~~~~~~ 619 (630)
T 3ogz_A 588 RLSEVDRIRGFVLKKTAMAVMDCNTKGESEAG 619 (630)
T ss_dssp CCCHHHHTTTEEEECCCCEEECC---------
T ss_pred CCChhhcccceeEEeeeEEEEEecCCCccccC
Confidence 67889999999999999999999874
No 2
>3gue_A UTP-glucose-1-phosphate uridylyltransferase 2; phosphatase, UDP, structural GE structural genomics consortium, SGC; HET: UPG PG4; 1.92A {Trypanosoma brucei}
Probab=100.00 E-value=1.6e-86 Score=723.74 Aligned_cols=394 Identities=16% Similarity=0.110 Sum_probs=330.2
Q ss_pred hhhhhcCcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCC
Q 007226 29 WGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAK 108 (612)
Q Consensus 29 ~Gl~~l~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~ 108 (612)
.|+++|+|+|||+||||||||||+++||+ +||++ +|+||||++++||+++| +++| +.||||||||+
T Consensus 69 ~G~~~L~kvavvlLaGGlGTRLG~~~pKg--~~~v~----sgksflql~~eqI~~l~----~~~~--~~iPl~IMTS~-- 134 (484)
T 3gue_A 69 ENTALLRQAVVLKLNGGLGTGMGLNGPKS--LLQVK----NGQTFLDFTALQLEHFR----QVRN--CNVPFMLMNSF-- 134 (484)
T ss_dssp CCHHHHTTEEEEEEECCCCGGGTCSSCGG--GSEEE----TTEEHHHHHHHHHHHHH----HHHT--CCCCEEEEECT--
T ss_pred HHHHHHhhcEEEEEcCCcccccCCCCCce--eeecC----CCCcHHHHHHHHHHHHH----HHcC--CCceEEEECCc--
Confidence 69999999999999999999999999999 99998 99999999999999999 4566 79999999999
Q ss_pred CchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeee-eecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEE
Q 007226 109 NNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWL-VMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKG 187 (612)
Q Consensus 109 ~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~-l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Giky 187 (612)
+||++|++||++|+|||++++||++|+|+++||+++++..++ ++++++++|+|+||||+|.+|++||+||+|+++|+||
T Consensus 135 ~T~~~T~~~~~k~~~Fgl~~~~v~~F~Q~~~P~i~~dg~~~i~~~~~~~i~~~P~GhGdiy~aL~~sGiLd~l~~~Giey 214 (484)
T 3gue_A 135 STSGETKNFLRKYPTLYEVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRY 214 (484)
T ss_dssp TTHHHHHHHGGGCHHHHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCGGGHHHHHHHHSHHHHHHHTTCCE
T ss_pred chhHHHHHHHHhCcccCCCccceEEEEeCceeeEecCCCceeecCCCCceeeccCCchHHHHHHHhCCcHHHHHHcCCEE
Confidence 699999999999999999999999999999999996544444 4677899999999999999999999999999999999
Q ss_pred EEEEecCCCccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEE-------ecCCCceecceEEEEecccCc
Q 007226 188 ATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEK-------KNLDGKWAYGLSCIEYTEFDK 260 (612)
Q Consensus 188 v~v~~vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~-------~~~dG~~~~~~~vVEYsel~~ 260 (612)
+||+||||+++.+||.| +|+++.++++|++++ ++|+.++|++|+||+. .+.||+ +++|||+|+|+
T Consensus 215 i~v~~vDNL~a~~Dp~~---lG~~~~~~~d~~~kv-v~Kt~~dekgG~l~~~~~~~~~~~~~dG~----~~vvEyseip~ 286 (484)
T 3gue_A 215 MFISNGDNLGATLDVRL---LDYMHEKQLGFLMEV-CRRTESDKKGGHLAYKDVIDETTGQTRRR----FVLRESAQCPK 286 (484)
T ss_dssp EEEEETTCTTCCCCHHH---HHHHHHTTCSEEEEE-EECCTTCCSSEEEEEEC--------CCCE----EEEEEGGGSCG
T ss_pred EEEEcCCCcccccCHHH---HHHHHhcCCCEEEEE-EECCCCCCceeEEEEEccccccccCCCCC----EEEEEeccCCH
Confidence 99999999666569976 899999999999997 5667899999999982 023898 89999999999
Q ss_pred cCcCCCCCCCCCccccccceeeEEEEeHHHHHhhhcccc--cCCccceeeecCCCceeecCCCCccccCceeeccchhhh
Q 007226 261 FGITRGPFSSNGLQADFPANTNILYVDLASAELVGSSEN--ERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNI 338 (612)
Q Consensus 261 ~~~~~~~~~dg~~~s~f~~Ninnl~~~L~~l~~~l~~~~--~~~lp~~ian~Kk~i~y~D~~g~~~~~~~~rLE~~Mqd~ 338 (612)
+..++... .++++.| ||||+|+++.+|++++++ . ...||+|+ |+| ++|+. ++.+++++||||||||+
T Consensus 287 e~~~~f~~--~~g~~~F--NtnNi~~~l~~l~~~l~~-~~g~~~Lp~~v-n~K----~id~~-k~~~~~~iqlE~~~~d~ 355 (484)
T 3gue_A 287 EDEDSFQN--IAKHCFF--NTNNIWINLMELKKMMDE-QLGVLRLPVMR-NPK----TVNPQ-DSQSTKVYQLEVAMGAA 355 (484)
T ss_dssp GGHHHHTC--TTTSCEE--EEEEEEEEHHHHHHHHHH-TTTCCCCCCEE-EEE----ESSTT-CTTSCEEEEEECCGGGG
T ss_pred HHHhhhcC--CCCceEe--EeeeEEEEHHHHHHHHHh-ccCcCCCCcEe-ccc----eecCC-CCCCCCEeehHHHHHHH
Confidence 98653112 2223444 999999999999999986 4 34689898 544 45665 35678999999999999
Q ss_pred hhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhhHHHHHHHHHHHHHHcCcccC-cccCC
Q 007226 339 ADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLP-EIEGN 417 (612)
Q Consensus 339 ~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~~~dl~~~~~~~l~~~g~~v~-~~~~~ 417 (612)
+.+|. ++++++++| .+|+||||+.+... .++|+|.... |..+. .+.
T Consensus 356 ~~~~~--------~~~~ieV~R-~rF~PvKn~sdLl~----------------~~Sdly~l~~------~~~l~~~~~-- 402 (484)
T 3gue_A 356 ISLFD--------RSEAVVVPR-ERFAPVKTCSDLLA----------------LRSDAYQVTE------DQRLVLCEE-- 402 (484)
T ss_dssp GTTSS--------SEEEEECCG-GGCCCCSSHHHHHH----------------HHSTTEEECT------TSCEEECGG--
T ss_pred HHhCC--------ccEEEEECh-hhccccccchHHHH----------------HhhhceeccC------CceEEeccc--
Confidence 98874 578899999 69999999644331 1234443321 21221 111
Q ss_pred CcccccCCCeeEEeCCcccccHHHHhcccCC--CCcCCCcEEEEEeceEEEeceEEEEEEEEEeccCCCCceecCCCcc
Q 007226 418 DKYIDDGPPYLILLHPALGLLWEVTRQKFKG--GSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGES 494 (612)
Q Consensus 418 ~~~~~~~P~~~v~l~p~~~~~~~~~~~k~~~--~si~~~s~L~veG~~~~~~~v~ldG~l~I~a~~~~g~~~~~~~g~~ 494 (612)
+ ....| +|.|+|++|+++++|++||++ |||.++++|+|+|+++|++||+|+|+|+|.|.+ |.+...|+|..
T Consensus 403 -~-~~~~P--~v~L~~~~~~~v~~f~~rf~~giPsl~~~~~L~V~Gdv~fg~~v~l~G~v~i~~~~--g~~~~ip~g~~ 475 (484)
T 3gue_A 403 -R-NGKPP--AIDLDGEHYKMIDGFEKLVKGGVPSLRQCTSLTVRGLVEFGADVSVRGNVVIKNLK--EEPLIIGSGRV 475 (484)
T ss_dssp -G-TTCCC--EEEECTTTSSSHHHHHHHHTTCCCBCTTEEEEEEESSEEECTTCEEEEEEEEEECS--SSCEEECTTCE
T ss_pred -c-CCCCC--eEEECchhcCcHHHHHHhcCCCCCChhhCCEEEEecceEECCCcEEEEEEEEEcCC--CCeeecCCCCE
Confidence 1 12346 499999999999999999999 799999999999999999999999999999998 88888888873
No 3
>3r3i_A UTP--glucose-1-phosphate uridylyltransferase; rossmann fold, beta barrel, nucleotidyltransferase; 3.57A {Homo sapiens} PDB: 3r2w_A
Probab=100.00 E-value=4e-83 Score=701.52 Aligned_cols=380 Identities=18% Similarity=0.214 Sum_probs=321.6
Q ss_pred hhhcCcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCc
Q 007226 31 IEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNN 110 (612)
Q Consensus 31 l~~l~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T 110 (612)
..+++|+|||+||||||||||+++||+ +||++ +|+||||++++||++++ ++|| +.||||||||+ +|
T Consensus 122 ~~~l~kvavvlLaGGlGTRLG~~~PK~--~i~V~----sgktflql~~eqI~~l~----~~~g--~~IPl~IMTS~--~T 187 (528)
T 3r3i_A 122 SSVLNKLVVVKLNGGLGTSMGCKGPKS--LIGVR----NENTFLDLTVQQIEHLN----KTYN--TDVPLVLMNSF--NT 187 (528)
T ss_dssp CTTCTTEEEEEECCCBCTTTTCSSBGG--GSEEE----TTEEHHHHHHHHHHHHH----HHHT--CCCCEEEEECT--TT
T ss_pred hhhcCceEEEEeCCCCccccCCCCCcc--ceecC----CCCcHHHHHHHHHHHHH----HHhC--CCCCEEEEecc--ch
Confidence 457789999999999999999999999 99996 99999999999999998 5677 79999999999 69
Q ss_pred hHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeec------CCCCcccCCCCchHhHHHHhcCchhHHHHCC
Q 007226 111 HERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMR------PFAPVCKPGGHGAIWKLAHDKGIFKWFHDNG 184 (612)
Q Consensus 111 ~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~------~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~G 184 (612)
|++|++||++|+||| .||++|+|+++||++ .+|+++++. +++++|+|+||||||.+|++||+||+|+++|
T Consensus 188 ~~~T~~~f~k~~~fg---~~V~~F~Q~~~P~i~-~dg~l~l~~~~~~~~~~~~~~~P~GhGdiy~aL~~sGlLd~l~~~G 263 (528)
T 3r3i_A 188 DEDTKKILQKYNHCR---VKIYTFNQSRYPRIN-KESLLPVAKDVSYSGENTEAWYPPGHGDIYASFYNSGLLDTFIGEG 263 (528)
T ss_dssp HHHHHSSCGGGTTSS---CCEEEEECCCBCCEE-TTTCCCC-------------CBCCBTTTHHHHHHHHSHHHHHHHTT
T ss_pred hHHHHHHHHhcCccC---CCeEEEEeCCeeeEe-cCCceecccccccCCCcceeeCcCCChHHHHHHHHCChHHHHHhcC
Confidence 999999999999999 599999999999999 569999975 7899999999999999999999999999999
Q ss_pred cEEEEEEecCCCccccchhhHHHhhhhhhc----CCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCc
Q 007226 185 RKGATVRQVSNVVAATDLTLLALAGIGLHH----GKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDK 260 (612)
Q Consensus 185 ikyv~v~~vDN~la~~Dp~i~~~~G~~~~~----~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~ 260 (612)
+||+||+||||+||++||.| +|+++.+ +++|.+++ ++|+.++|++|+||+ .||+ +++|||+|+|+
T Consensus 264 ieyi~v~nvDNlga~vDp~~---Lg~~~~~~~~~~~d~~~kV-v~Kt~~dek~Gvl~~---~dGk----~~vvEyseip~ 332 (528)
T 3r3i_A 264 KEYIFVSNIDNLGATVDLYI---LNHLMNPPNGKRCEFVMEV-TNKTRADVKGGTLTQ---YEGK----LRLVEIAQVPK 332 (528)
T ss_dssp CCEEEEEETTBTTCCCCHHH---HHHHSSCSSSCCCSEEEEE-CCCCTTCCSSCEEEC---SSSS----CEEECTTSSCG
T ss_pred CEEEEEEccCCcccccCHHH---HHHHHhcccccCCcEEEEE-eEccccCCcccEEEE---ECCe----EEEEEecCCCh
Confidence 99999999999999999976 8999998 99999996 778999999999997 7999 89999999999
Q ss_pred cCcCCCCCCCCCccccccc-eeeEEEEeHHHHHhhhcccccCCccceeeecCCCceeecCCCCccccCceeeccchhhhh
Q 007226 261 FGITRGPFSSNGLQADFPA-NTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIA 339 (612)
Q Consensus 261 ~~~~~~~~~dg~~~s~f~~-Ninnl~~~L~~l~~~l~~~~~~~lp~~ian~Kk~i~y~D~~g~~~~~~~~rLE~~Mqd~~ 339 (612)
+.+.+ .++.+.||+ |||||||+|++|+++++. ....||.|+ |+| ++|. .++++|||++|+|++
T Consensus 333 e~~~~-----~~g~~~f~~~Ntnnlw~~L~~L~~v~~~-~~l~Lp~iv-n~K----~vd~-----~~~viqlEt~igd~i 396 (528)
T 3r3i_A 333 AHVDE-----FKSVSKFKIFNTNNLWISLAAVKRLQEQ-NAIDMEIIV-NAK----TLDG-----GLNVIQLETAVGAAI 396 (528)
T ss_dssp GGTTT-----SSCSSSCCCCEEEEEEEEHHHHHHHHHT-TCCCCCCEE-EEE----CCSS-----SSCEEEEEBCSTTCS
T ss_pred hHhhc-----cCCcccCCeEEEEEEEEEHHHHHHHHHh-CCCCCCcee-cCc----ccCC-----CCCEEEeHHHHHHHH
Confidence 98653 233789996 999999999999999986 678899777 666 5553 358999999999999
Q ss_pred hhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhhHHHHHHHHHHHHHHcCcccCcccCCCc
Q 007226 340 DNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDK 419 (612)
Q Consensus 340 ~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~~~dl~~~~~~~l~~~g~~v~~~~~~~~ 419 (612)
..|+ ++..++|+|+. |+||||+.+....+ +|+|... .|.-+..+ .+
T Consensus 397 ~~f~--------~~~~i~VpR~r-F~PvKn~sdLll~~----------------Sdly~l~------~g~l~~~~---~r 442 (528)
T 3r3i_A 397 KSFE--------NSLGINVPRSR-FLPVKTTSDLLLVM----------------SNLYSLN------AGSLTMSE---KR 442 (528)
T ss_dssp TTSS--------SCCCEECCGGG-CCBCCSHHHHHHHH----------------STTSEEE------TTEEECCS---SC
T ss_pred Hhcc--------CcEEEEEehHH-cccccchHHHHHHh----------------cceeEee------CCeEEecc---cc
Confidence 8875 24568899985 99999975443221 2333322 13211111 11
Q ss_pred ccccCCCeeEEeCCcccccHHHHhcccCC-CCcCCCcEEEEEeceEEEeceEEEEEEEEEeccCCCCceecCCCcc
Q 007226 420 YIDDGPPYLILLHPALGLLWEVTRQKFKG-GSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGES 494 (612)
Q Consensus 420 ~~~~~P~~~v~l~p~~~~~~~~~~~k~~~-~si~~~s~L~veG~~~~~~~v~ldG~l~I~a~~~~g~~~~~~~g~~ 494 (612)
.....| +|.|+|. |+++++|++||++ |||.++++|+|+|+++|++||+|+|+|+|.|+. |.+...|+|..
T Consensus 443 ~~~~~P--~v~L~~~-~~~v~~f~~rf~~iP~l~~~~~LtV~Gdv~fg~~v~l~G~v~i~~~~--g~~~~ip~g~~ 513 (528)
T 3r3i_A 443 EFPTVP--LVKLGSS-FTKVQDYLRRFESIPDMLELDHLTVSGDVTFGKNVSLKGTVIIIANH--GDRIDIPPGAV 513 (528)
T ss_dssp SSCCCC--EEEECTT-SCSHHHHHHHCSSCCEEEEEEEEEEESEEECCTTCEEEEEEEEECCT--TCEEECCTTCE
T ss_pred cCCCCC--EEEeCcc-cCcHHHHHHhCCCCCCcccCCEEEEecceEECCCcEEEEEEEEEcCC--CCceecCCCCE
Confidence 122335 5999999 9999999999999 899999999999999999999999999999998 88888999984
No 4
>2oeg_A UTP-glucose-1-phosphate uridylyltransferase 2, putative; rossmann-fold, beta-helix, pyrophosphorylase; HET: UPG; 2.30A {Leishmania major} PDB: 2oef_A*
Probab=100.00 E-value=2.3e-81 Score=690.45 Aligned_cols=406 Identities=16% Similarity=0.075 Sum_probs=345.4
Q ss_pred hhhhhcCcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCC
Q 007226 29 WGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAK 108 (612)
Q Consensus 29 ~Gl~~l~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~ 108 (612)
+|+++|+++|+|+||||+|||||++.||+ ++|++ +|+||||++++||++++ .++| +.|||+||||+
T Consensus 68 ~g~~~l~k~avViLAGGlGTRLg~~~PK~--llpV~----~gk~fLe~~ie~l~~~~----~~~g--~~ip~viMtS~-- 133 (505)
T 2oeg_A 68 CDNAVLQSTVVLKLNGGLGTGMGLCDAKT--LLEVK----DGKTFLDFTALQVQYLR----QHCS--EHLRFMLMDSF-- 133 (505)
T ss_dssp CCHHHHHTEEEEEEECCCCGGGTCCSCGG--GSEEE----TTEEHHHHHHHHHHHHH----HHTC--TTCEEEEEECH--
T ss_pred HHHHHHhcceEEEEcCCcccccCCCCCCc--ccccC----CCCcHHHHHHHHHHHHH----HhcC--CCcCEEEEeCC--
Confidence 79999999999999999999999999999 99998 89999999999999998 4556 68999999999
Q ss_pred CchHHHHHHHH-HcccCCCCCCceEEEEecccceEecCCCeee-eecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcE
Q 007226 109 NNHERITSLCE-RLRWFGRGQSSFQLFEQPLVPAVDAEDGQWL-VMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRK 186 (612)
Q Consensus 109 ~T~~~T~~~le-~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~-l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gik 186 (612)
.||+.|++||+ +|+|||+++++|++|+|+++||+++++++++ +++++.++|+|+||||+|++|++||+|++|+++|++
T Consensus 134 ~t~e~t~~~f~~~~~~fGl~~~~I~~f~Q~~~P~~~~~~~~~i~~~~~~~~e~~P~G~Gg~~~aL~~sGlL~~l~~~G~e 213 (505)
T 2oeg_A 134 NTSASTKSFLKARYPWLYQVFDSEVELMQNQVPKILQDTLEPAAWAENPAYEWAPPGHGDIYTALYGSGKLQELVEQGYR 213 (505)
T ss_dssp HHHHHHHHHHHHHCHHHHTTCCCCCEEECCCEECEETTTCCBCCCTTCGGGGEECCCTTHHHHHHHHTTHHHHHHHTTCC
T ss_pred CCHHHHHHHHhhhhhccCCCccceEEEEEcCEEeEecCCCceeecCCCCccccCcCCchHHHHHHHhcChHHHHHhcCCC
Confidence 69999999999 9999999999999999999999997666877 667777999999999999999999999999999999
Q ss_pred EEEEEecCCCccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEec----CCCc--eecc-eEEEEecccC
Q 007226 187 GATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKN----LDGK--WAYG-LSCIEYTEFD 259 (612)
Q Consensus 187 yv~v~~vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~----~dG~--~~~~-~~vVEYsel~ 259 (612)
|++|+|+||+.+.+||.| +|++..+++++.+++ ++|+.+++++|+++.++. .||+ ..|. +.++||+|+|
T Consensus 214 ~i~V~N~DNL~~~~D~~l---lg~~~~~~ad~~~~v-~~k~~~d~~~Gvl~~~~~~~~~~dg~~nvEyn~~~llEyse~p 289 (505)
T 2oeg_A 214 YMFVSNGDNLGATIDKRV---LAYMEKEKIDFLMEV-CRRTESDKKGGHLARQTVYVKGKDGQPDAEKRVLLLRESAQCP 289 (505)
T ss_dssp EEEEECTTCTTCCCCHHH---HHHHHHHTCSEEEEE-EECCTTCCSSEEEEEEEEEECCSSSCCCEEEEEEEEEEGGGSC
T ss_pred EEEEEECCccccccCHHH---HHHHHhcCCcEEEEE-EEecCCccceeEEEEecccccccCCccccccCceeEEEeccCC
Confidence 999999999766679955 899999999999997 556678899999987421 6776 1222 6799999999
Q ss_pred ccCcCCCCCCCCCccccccc-eeeEEEEeHHHHHhhhccc-ccCCccceeeecCCCceeecCCCCccccCceeeccchhh
Q 007226 260 KFGITRGPFSSNGLQADFPA-NTNILYVDLASAELVGSSE-NERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQN 337 (612)
Q Consensus 260 ~~~~~~~~~~dg~~~s~f~~-Ninnl~~~L~~l~~~l~~~-~~~~lp~~ian~Kk~i~y~D~~g~~~~~~~~rLE~~Mqd 337 (612)
++...+ .++.+.||+ |||||||+|++|+++++.. ....||+|+ |+| +|+|.| +.+++++||||||||
T Consensus 290 ~e~~~~-----~~g~~~f~~~Ninn~~~~l~~l~~~~~~~~~~~~Lp~~v-n~K-~i~~~d----~~~~~~~qlE~~~~d 358 (505)
T 2oeg_A 290 KADMES-----FQDINKYSFFNTNNLWIRLPVLLETMQEHGGTLPLPVIR-NEK-TVDSSN----SASPKVYQLETAMGA 358 (505)
T ss_dssp GGGHHH-----HHCTTTTCEEEEEEEEEEHHHHHHHHHHTTSSCCCCCEE-EEE-ESSSSC----TTSCEEEEEECCGGG
T ss_pred hhhhhc-----ccCccccCeeEEEEEEEEHHHHHHHHhhhcCccCCccee-ccc-ccCCCC----CCCCCeEEEeEHHHH
Confidence 987543 123689996 9999999999999999752 123579888 444 366665 356799999999999
Q ss_pred hhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhhHHHHHHHHH--HHHHHcCcccCccc
Q 007226 338 IADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAY--DILCQCHIKLPEIE 415 (612)
Q Consensus 338 ~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~~~dl~~~~~--~~l~~~g~~v~~~~ 415 (612)
++.+|. ++++++++|+ +|+||||+. +|.++++|+|..++ +|+. +|.++
T Consensus 359 ~~~~~~--------~~~~~~V~R~-~FsPvKn~~----------------dl~~~~sdly~~~~~~~~~~-~~~~~---- 408 (505)
T 2oeg_A 359 AIAMFE--------SASAIVVPRS-RFAPVKTCA----------------DLLALRSDAYVVTDDFRLVL-DDRCH---- 408 (505)
T ss_dssp GGGSCT--------TCEEEECCGG-GCCCCSSHH----------------HHHHHHSTTEEECTTCCEEE-CGGGT----
T ss_pred HHHhcC--------cceEEEeccc-eeecccCCC----------------CHHHHHHHHHhhcCCceEEE-ccccc----
Confidence 999874 3688999999 999999942 56678889998887 4544 33322
Q ss_pred CCCcccccCCCeeEEeCCcccccHHHHhcccCCC--CcCCCcEEEEEeceEEEeceEEEEEEEEEec-cCCCCceecCCC
Q 007226 416 GNDKYIDDGPPYLILLHPALGLLWEVTRQKFKGG--SVSKGSELQIEVAEFLWRNVQLDGSLIIVAE-NVMGSTRIADNG 492 (612)
Q Consensus 416 ~~~~~~~~~P~~~v~l~p~~~~~~~~~~~k~~~~--si~~~s~L~veG~~~~~~~v~ldG~l~I~a~-~~~g~~~~~~~g 492 (612)
..+|. |.|+|.||+++++|++||++| ||+++|+|+|+|+++|++||+|+|+|+|.|. + |+
T Consensus 409 ------~~~p~--i~l~p~~~~~~~~~~~r~~~g~psi~~~~~L~v~G~~~f~~~v~l~G~v~i~a~~~--~~------- 471 (505)
T 2oeg_A 409 ------GHPPV--VDLDSAHYKMMNGFEKLVQHGVPSLVECKRVTVKGLVQFGAGNVLTGTVTIENTDS--AS------- 471 (505)
T ss_dssp ------TCCCE--EEECHHHHSSHHHHHHHSTTCCCBCTTEEEEEEESSEECCTTCEEEEEEEEECCSC--SS-------
T ss_pred ------CcCCe--EEEChhHcCcHHHHHHhcCCCCCccccCcEEEEEcceEEccCcEEEEEEEEEecCC--CC-------
Confidence 24676 999999999999999999995 8999999999999999999999999999988 5 55
Q ss_pred cceeeccceeceEEE-eeeEEeeCcEEeee
Q 007226 493 ESILQYGYRCGRCKL-NNVKVLNKGIDWDC 521 (612)
Q Consensus 493 ~~~~~~~~~~~~~~~-~~~~V~N~G~~~~~ 521 (612)
++.| +|+.|+|+|+....
T Consensus 472 -----------~~~ip~g~~l~n~~~~~~~ 490 (505)
T 2oeg_A 472 -----------AFVIPDGAKLNDTTASPQQ 490 (505)
T ss_dssp -----------CEECCTTCEEESCEECC--
T ss_pred -----------cEEeCCCCEEeCceechhh
Confidence 4566 77799999987765
No 5
>3oc9_A UDP-N-acetylglucosamine pyrophosphorylase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.80A {Entamoeba histolytica}
Probab=100.00 E-value=8.8e-79 Score=652.88 Aligned_cols=355 Identities=17% Similarity=0.231 Sum_probs=314.0
Q ss_pred HHHHHHhhhhhc--CcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhh-cCCcceee
Q 007226 23 AAQAALWGIEGL--PELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKL-YGKQCITP 99 (612)
Q Consensus 23 ~~~~~~~Gl~~l--~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~-~g~~~~iP 99 (612)
.++++++|+++| +|+|+|+||||||||||++.||+ ++||+++ +||||||+++++|+++|+|+.+. +|..+.||
T Consensus 20 ~~~~~~~Gl~~i~~gkvavvlLAGG~GTRLG~~~PK~--~~~Vgl~--~gks~lq~~~e~i~~lq~l~~~~~~~~~~~Ip 95 (405)
T 3oc9_A 20 TKEHYYRGLELISQGKTALITPAGGQGSRLGFEHPKG--MFVLPFE--IPKSIFQMTSERLLRLQELASEYSHQKNVMIH 95 (405)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEECCSBCTTTTCCSBGG--GCEECSS--SCEEHHHHHHHHHHHHHHHHHHHHCCSCCCCE
T ss_pred cHHHHHHHHHHHhcCceEEEEecCCCcccccCCCCCc--cccccCC--CCCcHHHHHHHHHHHHHHHHhhhccccCCCCC
Confidence 334557899999 49999999999999999999999 9999987 99999999999999999998776 66668999
Q ss_pred EEEecCCCCCchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhH
Q 007226 100 VAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKW 179 (612)
Q Consensus 100 l~IMTS~~~~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~ 179 (612)
|+||||+ .||++|++||++|+|||++++||++|+|+++||++ .+|+++++++++++|+|+||||+|++|+++|+||+
T Consensus 96 ~~IMtS~--~t~e~t~~~f~~~~~fGl~~~~i~~f~Q~~~P~i~-~dg~i~l~~~~~i~~~P~GhGgi~~aL~~sG~Ld~ 172 (405)
T 3oc9_A 96 WFLMTNE--ETIEEINNYFKEHQYFGLSSEQIHCFPQGMLPVVD-FNGKILYEKKDKPYMAPNGHGGLFKALKDNGILEF 172 (405)
T ss_dssp EEEEECT--TTHHHHHHHHHHTGGGGSCTTSEEEEECCEEECBC-TTSCBCEEETTEECEEECCGGGHHHHHHHTTHHHH
T ss_pred EEEEeCC--ccHHHHHHHHHhCcccCCCccceEEEeeCceeEEe-cCCCeecCCCCccccccCCChHHHHHHHHCCcHHH
Confidence 9999999 69999999999999999999999999999999997 67999999999999999999999999999999999
Q ss_pred HHHCCcEEEEEEecCCCcccc-chhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEeccc
Q 007226 180 FHDNGRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEF 258 (612)
Q Consensus 180 l~~~Gikyv~v~~vDN~la~~-Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel 258 (612)
|+++|++|++|+|+||+|+++ ||.| +|+++.+++++.+++ ++|+.++|++|+||+ .||+ ++||||+|+
T Consensus 173 l~~~Gieyi~v~nvDN~L~~~~Dp~~---lg~~~~~~~d~~~kv-v~k~~~dek~Gvl~~---~dg~----~~vvEysei 241 (405)
T 3oc9_A 173 MNEKGIKYSVAHNVDNILCKDVDPNM---IGYMDLLQSEICIKI-VKKGFKEEKVGVLVK---EQER----IKVVEYTEL 241 (405)
T ss_dssp HHHHTCCEEEEECTTBTTCCSSCHHH---HHHHHHTTCSEEEEE-EECCSTTCSCCEEEE---ETTE----EEEECGGGC
T ss_pred HHhcCCEEEEEEeCCCcccccCCHHH---HHHHHHcCCCEEEEE-EECCCCCCccceEEE---ECCe----eEEEEEeeC
Confidence 999999999999999988887 9966 899999999999996 667788999999997 6998 899999999
Q ss_pred CccCcCCCCCCCCCccccccc-eeeEEEEeHHHHHhhhcccccCCccceeeecCCCceeecCCCC---ccccCceeeccc
Q 007226 259 DKFGITRGPFSSNGLQADFPA-NTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGD---THSVPGGRLECT 334 (612)
Q Consensus 259 ~~~~~~~~~~~dg~~~s~f~~-Ninnl~~~L~~l~~~l~~~~~~~lp~~ian~Kk~i~y~D~~g~---~~~~~~~rLE~~ 334 (612)
|++ .. .+..++ .+.|++ ||+||+|+++||+++++ ..||+|+|+|| |||+|.+|+ +..++++|||+|
T Consensus 242 ~~e-~e-~~~~~g--~l~fn~~Ni~~h~fs~~fL~~i~~----~~l~~h~a~Kk--ip~~d~~g~~~~p~~~ngiklE~f 311 (405)
T 3oc9_A 242 TDE-LN-KQLSNG--EFIYNCGHISINGYSTSFLEKAAE----YQLPYHIAKKK--VPFVNEQGIVIHPSENNGIKKEIF 311 (405)
T ss_dssp CTT-TT-CBCTTS--CBSSCEEEEEEEEEEHHHHHHHTT----CCCCCEEEEEC--CCEECTTSCEECCSSCCEEEEECC
T ss_pred CHH-Hh-hcCCCC--ceeeccceeEeeecCHHHHHHhhh----ccCCcEEeccc--cCccCCCCCCcccCCcceeehHHH
Confidence 999 43 233334 578987 99999999999999983 26999999854 999998775 234678999999
Q ss_pred hhhhhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhhHHHHHHHHHHHHHHcCcccCcc
Q 007226 335 MQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEI 414 (612)
Q Consensus 335 Mqd~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~~~dl~~~~~~~l~~~g~~v~~~ 414 (612)
|+|++.++ .++++++|+|..+||||||+++.+ . +||+||+.|+++++++|+.++|+.+...
T Consensus 312 ifd~f~~~--------~~~~~~eV~R~~eF~PlKn~~g~~-----~------dsp~tar~~l~~~~~~wl~~ag~~~~~~ 372 (405)
T 3oc9_A 312 FFDVFPLA--------TKVSIFEIQRFIEFSALKNSLNES-----F------DNVNTVKRDWYRLNIYYLKKAGAIVDDS 372 (405)
T ss_dssp GGGGGGGC--------SCEEEEECCHHHHCCBCCCCTTSS-----S------SSHHHHHHHHHHHHHHHHHHTTCEEECS
T ss_pred HHHHHHhc--------cceEEEEEChHhcccceecCCCCC-----C------CCHHHHHHHHHHHHHHHHHHCCCEEcCC
Confidence 98888775 367899999999999999998764 2 3999999999999999999999888532
Q ss_pred cCCCcccccCCC
Q 007226 415 EGNDKYIDDGPP 426 (612)
Q Consensus 415 ~~~~~~~~~~P~ 426 (612)
. ...+|++|.
T Consensus 373 ~--~~~~Eispl 382 (405)
T 3oc9_A 373 K--SPICEISFR 382 (405)
T ss_dssp S--CCCEEECTT
T ss_pred C--CccEEeCcc
Confidence 1 124567775
No 6
>2yqc_A UDP-N-acetylglucosamine pyrophosphorylase; uridine-diphospho-N- acetylglucosamine, N-acetylglucosamine-1-phosphate, transferase; 1.90A {Candida albicans} PDB: 2yqh_A* 2yqj_A* 2yqs_A*
Probab=100.00 E-value=4.5e-77 Score=655.98 Aligned_cols=382 Identities=18% Similarity=0.196 Sum_probs=328.8
Q ss_pred CCCccccC---CChHHHHHHHHhhhhhcC--cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHH
Q 007226 10 VPSGLDLS---QNTEYAAQAALWGIEGLP--ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAR 84 (612)
Q Consensus 10 vP~g~~l~---~~~~~~~~~~~~Gl~~l~--k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~l 84 (612)
+|++..++ .+++..+.++++|+++|+ |+|+|+||||+|||||++.||+ ++|++++ +|+||||+++++|+++
T Consensus 72 ~p~~~~~~~~~~~~~~~~~~~~~G~~~i~~gkvavvlLaGG~GTRLg~~~PK~--l~~v~l~--~gk~~l~~~~e~l~~~ 147 (486)
T 2yqc_A 72 LPNEQTASTLDLSKDILQNWTELGLKAIGNGEVAVLLMAGGQGTRLGSSAPKG--CFNIELP--SQKSLFQIQAEKILKI 147 (486)
T ss_dssp CCGGGEEETTTSCHHHHHHHHHHHHHHHHTTCEEEEEEEESBCGGGTCSSBGG--GCBCCCT--TCCBHHHHHHHHHHHH
T ss_pred CChhhccccccCChHHHHHHHHHHHHHHhhCCeEEEEEcCCccccCCCCCCCc--cceecCC--CCCcHHHHHHHHHHHH
Confidence 67776544 356777777889999995 8999999999999999999999 9999987 9999999999999999
Q ss_pred HHHhHhhcC--CcceeeEEEecCCCCCchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCC-eeeeecCCCCcccC
Q 007226 85 EFLYFKLYG--KQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDG-QWLVMRPFAPVCKP 161 (612)
Q Consensus 85 q~la~k~~g--~~~~iPl~IMTS~~~~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg-~~~l~~~~~l~~~P 161 (612)
+.++.+++| +.+.|||+||||+ .||+.|++||++|+|||++.++|+||+|+++||++. +| ++++++++.++|+|
T Consensus 148 ~~~~~~~~G~~~~~~ip~~ImtS~--~t~~~t~~~~~~~~~fgl~~~~v~~f~Q~~~P~i~~-dg~~i~l~~~~~i~~~P 224 (486)
T 2yqc_A 148 EQLAQQYLKSTKKPIINWYIMTSG--PTRNATESFFIENNYFGLNSHQVIFFNQGTLPCFNL-QGNKILLELKNSICQSP 224 (486)
T ss_dssp HHHHHHHHTCSSCCCCEEEEEECG--GGHHHHHHHHHHTGGGGSCGGGEEEEECCEEECBCT-TSSSBCEEETTEECEEE
T ss_pred HHHhhhhcCCCcCCccCEEEEECC--CCHHHHHHHHhhccccCCCcceEEEEecccceeEcC-CCCccccCCCCccccCc
Confidence 999988877 6678999999999 699999999999999999999999999999999995 79 99999999999999
Q ss_pred CCCchHhHHHHhcCchhHHHHCCcEEEEEEecCCCcccc-chhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEe
Q 007226 162 GGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKK 240 (612)
Q Consensus 162 ~GhGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN~la~~-Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~ 240 (612)
+||||+|.+|+++|+|++|+++|++|++|+|+||+||++ ||.| +|++..+++++++++ ++|+.+++++|++|..
T Consensus 225 ~G~Ggi~~aL~~sG~Ld~l~~~G~~yi~v~~vDN~l~~~~Dp~~---lg~~~~~~~~~~~~v-v~k~~~~e~~Gvl~~~- 299 (486)
T 2yqc_A 225 DGNGGLYKALKDNGILDDLNSKGIKHIHMYCVDNCLVKVADPIF---IGFAIAKKFDLATKV-VRKRDANESVGLIVLD- 299 (486)
T ss_dssp CCGGGHHHHHHHTTHHHHHHHHTCCEEEEEETTBTTCCTTCHHH---HHHHHHHTCSEEEEE-EECCSTTCCCCEEEEE-
T ss_pred CCchHHHHHHHHcCcHHHHHhcCCeEEEEECCCCceeeccCHHH---HHHHHHcCCCEEEEE-EEcCCCCCceeEEEEE-
Confidence 999999999999999999999999999999999999986 9966 899999999999996 6678899999999972
Q ss_pred cCCCceecceEEEEecccCccCcCCCCCCCCCccccccc-eeeEEEEeHHHHHhhhcccccCC---ccceeeecCCCcee
Q 007226 241 NLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPA-NTNILYVDLASAELVGSSENERS---LPGMVLNTKKPIVY 316 (612)
Q Consensus 241 ~~dG~~~~~~~vVEYsel~~~~~~~~~~~dg~~~s~f~~-Ninnl~~~L~~l~~~l~~~~~~~---lp~~ian~Kk~i~y 316 (612)
..||+ ++||||+|+|++.+... ..+..+...|.. |||||||++++|++++.+ ..+. ||+|++. |+|||
T Consensus 300 ~~dg~----~~vvEy~E~~~~~~~~~-~~~~~~~~~~~~~Ni~~~~~~l~~L~~~l~~-~~~~~~~lp~~v~~--Kki~~ 371 (486)
T 2yqc_A 300 QDNQK----PCVIEYSEISQELANKK-DPQDSSKLFLRAANIVNHYYSVEFLNKMIPK-WISSQKYLPFHIAK--KKIPS 371 (486)
T ss_dssp TTTTE----EEEECGGGSCHHHHHCE-ETTEEEEESSCEEEEEEEEEEHHHHHHHHHH-HTTCTTTSCCEEEE--ECCCE
T ss_pred ecCCC----EEEEEEecCCHHHhhcc-cccccccccccceeEEEEEEeHHHHHHHHHh-hcCcccCCcceEec--cccCc
Confidence 12898 89999999999865421 111002345655 999999999999997765 4566 9999965 45999
Q ss_pred ecC-CCC---ccccCceeeccchhhhhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhh
Q 007226 317 MDN-FGD---THSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGS 392 (612)
Q Consensus 317 ~D~-~g~---~~~~~~~rLE~~Mqd~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~ 392 (612)
+|+ +|. ++.++++||||||||++..+. ..++++++++|+.+||||||+++++ .+||+||
T Consensus 372 ~d~~~g~~~~p~~pn~~klE~~~~d~~~~~~------l~~~~~~~V~R~~~FsPvKn~~~~~-----------~dsp~ta 434 (486)
T 2yqc_A 372 LNLENGEFYKPTEPNGIKLEQFIFDVFPSVE------LNKFGCLEVDRLDEFSPLKNADGAK-----------NDTPTTC 434 (486)
T ss_dssp ECTTTCCEECCSSCCEEEEECCGGGGGGGSC------GGGEEEEEECHHHHCCBCCSCTTSS-----------SSSHHHH
T ss_pred cccccCeeccCCCCCeeeeeehHhhHHhhcc------cCceEEEEECcccceeeecCCCCCC-----------CCCHHHH
Confidence 996 342 235678999999999988763 3378999999999999999987664 2399999
Q ss_pred HHHHHHHHHHHHHHcCcccCcccCCCcccccCCCeeEEeCCc
Q 007226 393 FLDILRNAYDILCQCHIKLPEIEGNDKYIDDGPPYLILLHPA 434 (612)
Q Consensus 393 ~~dl~~~~~~~l~~~g~~v~~~~~~~~~~~~~P~~~v~l~p~ 434 (612)
+.|+|+++++||++||+++++. ..+|++|. |.++-.
T Consensus 435 ~~~l~~~~~~~l~~aG~~~~~~----~~~eisp~--~sy~ge 470 (486)
T 2yqc_A 435 RNHYLERSSKWVIQNGGVIDNQ----GLVEVDSK--TSYGGE 470 (486)
T ss_dssp HHHHHHHHHHHHHHTTCEECTT----CCCBCCTT--TCSSST
T ss_pred HHHHHHHHHHHHHHCCCeecCC----CcEEEcce--eeECCC
Confidence 9999999999999999998643 35789997 666654
No 7
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A*
Probab=100.00 E-value=1.3e-71 Score=614.88 Aligned_cols=361 Identities=19% Similarity=0.248 Sum_probs=317.0
Q ss_pred eCCCccccCC--ChHHHHHHHHhhhhhc--CcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHH
Q 007226 9 HVPSGLDLSQ--NTEYAAQAALWGIEGL--PELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAR 84 (612)
Q Consensus 9 ~vP~g~~l~~--~~~~~~~~~~~Gl~~l--~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~l 84 (612)
.+|++...+. +.+....++++|++++ +|+|+|+||||+|||||++.||+ ++|++++ +|+||||+++++|+++
T Consensus 71 p~p~~~~~~~~~~~~~~~~~~~~Gl~~i~~~kvavViLAGG~GTRLg~~~PK~--l~pv~~~--~gk~~le~~~e~l~~l 146 (505)
T 1jv1_A 71 PVPREVLGSATRDQDQLQAWESEGLFQISQNKVAVLLLAGGQGTRLGVAYPKG--MYDVGLP--SRKTLFQIQAERILKL 146 (505)
T ss_dssp CCCGGGEEETTTTGGGHHHHHHHHHHHHHTTCEEEEEECCCCCCTTSCSSCGG--GCCCCCT--TCCCHHHHHHHHHHHH
T ss_pred CCChHhcccccCChHHHHHHHHHhHHhhccCceEEEEEcCCccccCCCCCCCc--cceeecC--CCCcHHHHHHHHHHHH
Confidence 3666655544 4555667778999998 58999999999999999999999 9999877 9999999999999999
Q ss_pred HHHhHhhcCCcceeeEEEecCCCCCchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCC
Q 007226 85 EFLYFKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGH 164 (612)
Q Consensus 85 q~la~k~~g~~~~iPl~IMTS~~~~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~Gh 164 (612)
|+|+.+++|..+.+||+||||+ .||+.|++||++|+|||+++++|++|+|+++||+++ +|++++++++.++|+|+||
T Consensus 147 q~la~~~~G~~~~ip~vImtS~--~t~e~t~~~f~~~~~fGl~~~~I~~f~Q~~~P~i~~-~g~~~l~~~~~~e~~P~Gt 223 (505)
T 1jv1_A 147 QQVAEKYYGNKCIIPWYIMTSG--RTMESTKEFFTKHKYFGLKKENVIFFQQGMLPAMSF-DGKIILEEKNKVSMAPDGN 223 (505)
T ss_dssp HHHHHHHHSSCCCCCEEEEECT--TTHHHHHHHHHHTGGGGSCGGGEEEEECCEEECEET-TSCBCEEETTEECEEECCG
T ss_pred HHHHHHhcCCCccceEEEEecC--CCHHHHHHHHHhhhhcCCCcCceEEEEecceEEEcC-CCcccccCCcccccCCCCc
Confidence 9999888997678999999999 699999999999999999999999999999999995 7999999999999999999
Q ss_pred chHhHHHHhcCchhHHHHCCcEEEEEEecCCCcccc-chhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCC
Q 007226 165 GAIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAAT-DLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLD 243 (612)
Q Consensus 165 GdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN~la~~-Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~d 243 (612)
||+|++|+++|+|++|+++|++|++|+|+||+|+.+ ||.| +|++..+++++.+++ ++|+.+++++|+||. .|
T Consensus 224 GG~~~~L~~sg~L~~l~~~g~e~~~V~n~Dn~L~~~~d~~~---lg~~~~~~~~~~~~v-~~k~~~~e~~Gvl~~---~d 296 (505)
T 1jv1_A 224 GGLYRALAAQNIVEDMEQRGIWSIHVYCVDNILVKVADPRF---IGFCIQKGADCGAKV-VEKTNPTEPVGVVCR---VD 296 (505)
T ss_dssp GGHHHHHHHTTHHHHHHHTTCCEEEEEETTBTTCCTTCHHH---HHHHHHTTCSEEEEE-EECCSTTCSCCEEEE---ET
T ss_pred hHHHHHHHHcCcHHHHHhcCCCEEEEEECCccccccchHHH---HHHHHHcCCCEEEEE-EEccCCccCcceEEE---EC
Confidence 999999999999999999999999999999998776 9965 899999999999996 667788999999997 58
Q ss_pred CceecceEEEEecccCccCcCCCCCCCCCccccccc-eeeEEEEeHHHHHhhhcccccCCccceeeecCCCceeecCCCC
Q 007226 244 GKWAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPA-NTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGD 322 (612)
Q Consensus 244 G~~~~~~~vVEYsel~~~~~~~~~~~dg~~~s~f~~-Ninnl~~~L~~l~~~l~~~~~~~lp~~ian~Kk~i~y~D~~g~ 322 (612)
|+ +++|||+|+|++..... ..+| .+.|+. |||||||++++|+++.+. ..+.||+|++. |+|||+|.+|.
T Consensus 297 g~----~~vvEy~E~p~~~~~~~-~~~g--~~~~~~~N~~~~~f~l~~L~~i~~~-~~~~l~~hv~~--Kkip~~d~~g~ 366 (505)
T 1jv1_A 297 GV----YQVVEYSEISLATAQKR-SSDG--RLLFNAGNIANHFFTVPFLRDVVNV-YEPQLQHHVAQ--KKIPYVDTQGQ 366 (505)
T ss_dssp TE----EEEECGGGSCHHHHHCB-CTTS--SBSSCEEEEEEEEEEHHHHHHHHHT-TGGGCCCEEEE--ECCCEECTTSC
T ss_pred Ce----EEEEEEeeCCHHHhhhc-cccc--ccccceeeEEEEEecHHHHHHHHHh-hcccCCceecc--cccccccCCCC
Confidence 98 89999999999865432 2223 467876 999999999999999875 56789999966 35999997653
Q ss_pred c---cccCceeeccchhhhhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhhHHHHHHH
Q 007226 323 T---HSVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRN 399 (612)
Q Consensus 323 ~---~~~~~~rLE~~Mqd~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~~~dl~~~ 399 (612)
. ..++++||||||||++..|. ++++++++|+.+|+||||+++.+ . .+||+||+.|+|++
T Consensus 367 ~v~P~~pn~~klE~~i~d~~~~~~--------~~~~~~V~R~~~FsPvKn~~~~~----~------~dsp~ta~~~l~~~ 428 (505)
T 1jv1_A 367 LIKPDKPNGIKMEKFVFDIFQFAK--------KFVVYEVLREDEFSPLKNADSQN----G------KDNPTTARHALMSL 428 (505)
T ss_dssp EECCSSCCEEEEECCGGGGGGGCS--------SEEEEEECHHHHCCBCCSCTTSS----S------SSSHHHHHHHHHHH
T ss_pred CcCCCCCCceeHHHHHHHHHhhcC--------ceEEEEECcccceeeccCCCCCC----C------CCCHHHHHHHHHHH
Confidence 2 24577999999999987763 68999999999999999987653 0 24999999999999
Q ss_pred HHHHHHHcCccc
Q 007226 400 AYDILCQCHIKL 411 (612)
Q Consensus 400 ~~~~l~~~g~~v 411 (612)
+++||++||+++
T Consensus 429 ~~~~l~~ag~~~ 440 (505)
T 1jv1_A 429 HHCWVLNAGGHF 440 (505)
T ss_dssp HHHHHHHTTCEE
T ss_pred HHHHHHHCCCee
Confidence 999999999988
No 8
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=100.00 E-value=5.2e-71 Score=604.98 Aligned_cols=399 Identities=19% Similarity=0.207 Sum_probs=332.8
Q ss_pred CCCccccCCChHHH-HHHHHhhhhhcCcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHh
Q 007226 10 VPSGLDLSQNTEYA-AQAALWGIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLY 88 (612)
Q Consensus 10 vP~g~~l~~~~~~~-~~~~~~Gl~~l~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la 88 (612)
+|++..+++++... ...++.|+++++++++|+||||+|||||++.||+ ++|+. +|+||||++++||++++
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~g~~~l~k~~vviLAGGlGTRLg~~~PK~--llpv~----~gkp~Le~~i~~l~~~~--- 122 (469)
T 2icy_A 52 PTDEIVVPYEKMTPVSQDVAETKNLLDKLVVLKLNGGLGTTMGCTGPKS--VIEVR----DGLTFLDLIVIQIENLN--- 122 (469)
T ss_dssp CCTTTEEEGGGSCCCCSCHHHHHHHHTTEEEEEEECCBSGGGTCCSBGG--GSEEE----TTEEHHHHHHHHHHHHH---
T ss_pred CCcccccChhhcccchhhHHHHHHhhccceEEEEcCCccccCCCCCCcc--ccccC----CCCCHHHHHHHHHHHHH---
Confidence 55555555533211 1223569999999999999999999999999999 99996 89999999999999997
Q ss_pred HhhcCCcceeeEEEecCCCCCchHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecC---CCCcccCCCCc
Q 007226 89 FKLYGKQCITPVAIMTSSAKNNHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRP---FAPVCKPGGHG 165 (612)
Q Consensus 89 ~k~~g~~~~iPl~IMTS~~~~T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~---~~l~~~P~GhG 165 (612)
+++| +.|||+||||+ .||+.|++||++|++||+ +|++|+|+++||+++ +++++++.+ ++++|+|+|||
T Consensus 123 -~~~G--~~ip~vimts~--~t~e~t~~~f~~~~~fG~---~I~~f~Q~~~P~i~~-e~~~~l~~~~~~~~~e~~P~GtG 193 (469)
T 2icy_A 123 -NKYG--CKVPLVLMNSF--NTHDDTHKIVEKYTNSNV---DIHTFNQSKYPRVVA-DEFVPWPSKGKTDKEGWYPPGHG 193 (469)
T ss_dssp -HHHS--CCCCEEEEECT--TTHHHHHHHHGGGTTSSS---CEEEEECCCEECEET-TTTEEGGGGTCCSGGGEECCCGG
T ss_pred -HhcC--CCccEEEEeCC--CCHHHHHHHHHhcccCCc---eEEEEEecceeeEcc-ccCccccCCCCCccccCCcCCch
Confidence 5667 68999999999 699999999999999998 799999999999995 689999755 78999999999
Q ss_pred hHhHHHHhcCchhHHHHCCcEEEEEEecCCCccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCc
Q 007226 166 AIWKLAHDKGIFKWFHDNGRKGATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGK 245 (612)
Q Consensus 166 dI~~aL~~sGlLd~l~~~Gikyv~v~~vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~ 245 (612)
|+|++|+++|+|++|.++|++|++|+|+||+.+..||.| +|++..+++++.+++ ++++.+++++|+++. .||+
T Consensus 194 G~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~~l---l~~~~~~~a~~t~~v-~~k~~~~~~~Gvl~~---~dg~ 266 (469)
T 2icy_A 194 DVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDLTI---LKHLIQNKNEYCMEV-TPKTLADVKGGTLIS---YEGK 266 (469)
T ss_dssp GHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCHHH---HHHHHHHTCSEEEEE-EECCTTCCSSCEEEE---ETTE
T ss_pred HHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCHHH---HHHHHHcCCCeeEEE-EEeccCCCceeEEEE---ECCE
Confidence 999999999999999999999999999999766679965 899999999999996 667888899999997 6888
Q ss_pred eecceEEEEecccCccCcCCCCCCCCCccccccc-eeeEEEEeHHHHHhhhcccccCCccceeeecCCCceeecCCCCcc
Q 007226 246 WAYGLSCIEYTEFDKFGITRGPFSSNGLQADFPA-NTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTH 324 (612)
Q Consensus 246 ~~~~~~vVEYsel~~~~~~~~~~~dg~~~s~f~~-Ninnl~~~L~~l~~~l~~~~~~~lp~~ian~Kk~i~y~D~~g~~~ 324 (612)
+.++||+|+|++...+ +.+ ...|+. |||||||++++|+++++. ....||+|+ |+| ++| |
T Consensus 267 ----~~vvE~~e~p~~~~~e--~k~---~~~~~~~N~g~y~~~~~~L~~i~~~-~~~~lp~~v-~~K----~id--~--- 326 (469)
T 2icy_A 267 ----VQLLEIAQVPDEHVNE--FKS---IEKFKIFNTNNLWVNLKAIKKLVEA-DALKMEIIP-NPK----EVD--G--- 326 (469)
T ss_dssp ----EEEECGGGSCGGGHHH--HHS---SSSCCEEEEEEEEEEHHHHHHHHHT-TCCCCCCBC-CEE----EET--T---
T ss_pred ----EEEEEEeccChhhhhh--hcc---ccccceeeEEEEEEcHHHHHHHHhc-ccCCchhhc-cce----ecC--C---
Confidence 8999999999875431 001 135665 999999999999999986 567899888 655 455 3
Q ss_pred ccCceeeccchhhhhhhhhccccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhhHHHHHHHHHH-H
Q 007226 325 SVPGGRLECTMQNIADNFLNTYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYD-I 403 (612)
Q Consensus 325 ~~~~~rLE~~Mqd~~~~f~~~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~~~dl~~~~~~-~ 403 (612)
++++|||++|||++..|. ++..++++|. +|+||||+. |++..+++ |
T Consensus 327 -~~~~klE~~~~D~~~~~~--------~~~~~~V~R~-~F~PvKn~~-----------------------dll~~~s~l~ 373 (469)
T 2icy_A 327 -VKVLQLETAAGAAIRFFD--------NAIGVNVPRS-RFLPVKASS-----------------------DLLLVQSDLY 373 (469)
T ss_dssp -EEEECCBCCGGGGGGGST--------TCEEEECCGG-GCCBCCSHH-----------------------HHHHHHSTTE
T ss_pred -CceEeehHhhHHHHHhcC--------CeEEEEechh-HcCcCCCHH-----------------------HHHHHHHHHH
Confidence 479999999999998874 2455689998 899999952 44444444 3
Q ss_pred HHHcCcccCcccCCCcccccCCCeeEEeCCcccccHHHHhcccCC-CCcCCCcEEEEEeceEEEeceEEEEEEEEEeccC
Q 007226 404 LCQCHIKLPEIEGNDKYIDDGPPYLILLHPALGLLWEVTRQKFKG-GSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENV 482 (612)
Q Consensus 404 l~~~g~~v~~~~~~~~~~~~~P~~~v~l~p~~~~~~~~~~~k~~~-~si~~~s~L~veG~~~~~~~v~ldG~l~I~a~~~ 482 (612)
...+|..+..+ .+.++.+|. |.|+|. ++++++|++||++ |||.++++|+|+|+++|++||+|+|+|+|.|.+
T Consensus 374 ~~~~g~~~~~~---~~~~~~~P~--v~l~~~-~~~v~~f~~rf~~~p~~~~~~~l~v~gdv~fg~~v~l~G~v~i~~~~- 446 (469)
T 2icy_A 374 TLVDGFVTRNK---ARTNPSNPS--IELGPE-FKKVATFLSRFKSIPSIVELDSLKVSGDVWFGSSIVLKGKVTVAAKS- 446 (469)
T ss_dssp EEETTEEEECT---TCCSSSCCE--EEECGG-GCSHHHHHHTBSSCCBCTTEEEEEEESEEEECSSCEEEEEEEEECCT-
T ss_pred HHhcCcEEecC---cccCCCCCe--EEcChh-hhhHHHHHHhcCCCcccccCCeEEEEeeeEEcCCcEEEEEEEEEcCC-
Confidence 33445433221 224667885 999999 8899999999998 899999999999999999999999999999888
Q ss_pred CCCceecCCCcc
Q 007226 483 MGSTRIADNGES 494 (612)
Q Consensus 483 ~g~~~~~~~g~~ 494 (612)
|.+...|+|..
T Consensus 447 -~~~~~ip~g~~ 457 (469)
T 2icy_A 447 -GVKLEIPDRAV 457 (469)
T ss_dssp -TCEEEECTTCE
T ss_pred -CCeeecCCCCE
Confidence 88778888874
No 9
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-70 Score=598.93 Aligned_cols=381 Identities=20% Similarity=0.211 Sum_probs=319.8
Q ss_pred hhhhcCcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCC
Q 007226 30 GIEGLPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKN 109 (612)
Q Consensus 30 Gl~~l~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~ 109 (612)
|+++++++|+|+||||+|||||++.||+ ++|+. +|+||||++++++++++ +.+| +.|||+||||+ +
T Consensus 86 ~~~~~~k~avViLAGG~GTRmgs~~PK~--l~~V~----~gk~~Le~~i~~i~~l~----~~~G--~~Ip~vImts~--~ 151 (488)
T 2i5k_A 86 NVSNLSKLAVLKLNGGLGTSMGCVGPKS--VIEVR----EGNTFLDLSVRQIEYLN----RQYD--SDVPLLLMNSF--N 151 (488)
T ss_dssp CSTTGGGEEEEEECCCBSGGGTCCSBST--TSCCB----TTBCHHHHHHHHHHHHH----HHHT--CCCEEEEECCT--T
T ss_pred hhhhcCCceEEEEcCCCcccCCCCCCcc--ccccC----CCCcHHHHHHHHHHHhH----HhcC--CCccEEEEECC--C
Confidence 8888999999999999999999999999 99995 89999999999999987 4567 68999999998 5
Q ss_pred chHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecC---CCCcccCCCCchHhHHHHhcCchhHHHHCCcE
Q 007226 110 NHERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRP---FAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRK 186 (612)
Q Consensus 110 T~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~---~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gik 186 (612)
||+.|+++|+++++||+ +|++|.|+++||++ .+|+++++.+ ++++|+|+|||++|.+|+.+|++++|.++|++
T Consensus 152 t~e~t~~~~~~~~~fg~---~i~~f~Q~~~P~i~-~d~~~~l~~~~~~~~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~ 227 (488)
T 2i5k_A 152 TDKDTEHLIKKYSANRI---RIRSFNQSRFPRVY-KDSLLPVPTEYDSPLDAWYPPGHGDLFESLHVSGELDALIAQGRE 227 (488)
T ss_dssp THHHHHHHHGGGCSSSC---EEEEECCCCEECEE-TTTCCBSCSSSSSCTTSEECCCGGGHHHHHHHHTHHHHHHHTTCC
T ss_pred CHHHHHHHHHhccccCc---eEEEEEeCccceEc-cccceeeccCCCCCceeeecCCCchhhhhhhhcCcHHHHHhcCCC
Confidence 99999999999999997 79999999999999 5799999754 47999999999999999999999999999999
Q ss_pred EEEEEecCCCccc-cchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCccCcCC
Q 007226 187 GATVRQVSNVVAA-TDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITR 265 (612)
Q Consensus 187 yv~v~~vDN~la~-~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~ 265 (612)
|++|+|+|| |++ .||.+ +|++..+++++.+++ ++++.+++++|++++ .||+ +.+|||+|++++...+
T Consensus 228 ~v~V~ngDn-L~~~~d~~~---L~~~~~~~a~~t~~v-~~~~~p~~~yG~Iv~---~dG~----~~iVE~~e~~~e~~~~ 295 (488)
T 2i5k_A 228 ILFVSNGDN-LGATVDLKI---LNHMIETGAEYIMEL-TDKTRADVKGGTLIS---YDGQ----VRLLEVAQVPKEHIDE 295 (488)
T ss_dssp EEEEECTTB-SSCCCCHHH---HHHHHHSCCSEEEEE-EECCGGGSSSCEEEE---ETTE----EEEECGGGSCTTSHHH
T ss_pred EEEEEeCCc-CCCcccHHH---HHHHHhcCCcEEEEE-EEecCCCCceeEEEE---ECCc----EEEEEeccCCHHHHhh
Confidence 999999999 665 59965 699999999999996 677889999999987 5888 9999999999987542
Q ss_pred CCCCCCCccccccc-eeeEEEEeHHHHHhhhcccccCCccceeeecCCCceeecCCCCccccCceeeccchhhhhhhhhc
Q 007226 266 GPFSSNGLQADFPA-NTNILYVDLASAELVGSSENERSLPGMVLNTKKPIVYMDNFGDTHSVPGGRLECTMQNIADNFLN 344 (612)
Q Consensus 266 ~~~~dg~~~s~f~~-Ninnl~~~L~~l~~~l~~~~~~~lp~~ian~Kk~i~y~D~~g~~~~~~~~rLE~~Mqd~~~~f~~ 344 (612)
..+ ...|+. ||||+||++++|++++++ ....||+|++.| +||| |+++ ++++||||||||++.+|.
T Consensus 296 --~~~---~~~~~~~Ntgi~~f~~~~L~~~l~~-~~~~lp~~v~~K--~i~~-~~~~----~~~~qlE~~~~d~~~~~~- 361 (488)
T 2i5k_A 296 --FKN---IRKFTNFNTNNLWINLKAVKRLIES-SNLEMEIIPNQK--TITR-DGHE----INVLQLETACGAAIRHFD- 361 (488)
T ss_dssp --HTC---TTTCCEEEEEEEEEEHHHHHHHHHT-TCCCCCCBCCEE--CCCC----------CEECCBCCGGGGGGGSS-
T ss_pred --ccc---ccccCEEEEEEEEEeHHHHHHHHhh-ccCCCcceecCc--cccC-CCCC----CceEEeeehhhhHHhhcc-
Confidence 111 246776 999999999999999986 678899999553 4788 6443 489999999999999874
Q ss_pred cccccCCcceEEEccccceeecccCCCchhhhhhcccCCCCCCChhhhHHHHHHHHHHHHHHcCcccCcccCCCcccccC
Q 007226 345 TYSSRCYKGVEDDLDTFMVYNERRRVTSSAKKKRKRADMSLHQTPDGSFLDILRNAYDILCQCHIKLPEIEGNDKYIDDG 424 (612)
Q Consensus 345 ~f~~~~~k~~~~~~~R~~~FsPvKN~~~~~~~~~~~~~~~~~~sp~s~~~dl~~~~~~~l~~~g~~v~~~~~~~~~~~~~ 424 (612)
+++.++++|+ +|+||||+.+.. ++++|+|.. .+|..+..+ ..++++
T Consensus 362 -------~~~~~~V~R~-~F~PvKn~~~ll----------------~~~~~~~~~------~~g~~~~~~----~~~e~~ 407 (488)
T 2i5k_A 362 -------GAHGVVVPRS-RFLPVKTCSDLL----------------LVKSDLFRL------EHGSLKLDP----SRFGPN 407 (488)
T ss_dssp -------SCEEEEECGG-GCCBCCSHHHHH----------------HHTSTTEEE------ETTEEEECT----TCCSSC
T ss_pred -------CceEEEeccc-ccccccCCccHH----------------HHHHHHHHH------hcCcEeecC----CcCCCC
Confidence 3456678998 899999964221 222333332 345544322 126678
Q ss_pred CCeeEEeCCcccccHHHHhcccCC-CCcCCCcEEEEEeceEEEeceEEEEEEEEEeccCCCCceecCCCc
Q 007226 425 PPYLILLHPALGLLWEVTRQKFKG-GSVSKGSELQIEVAEFLWRNVQLDGSLIIVAENVMGSTRIADNGE 493 (612)
Q Consensus 425 P~~~v~l~p~~~~~~~~~~~k~~~-~si~~~s~L~veG~~~~~~~v~ldG~l~I~a~~~~g~~~~~~~g~ 493 (612)
|. |.|+|. ++++.+|++||++ |+|.++++|+|+|+++|++||+|+|+|+|.|.+ |....+|+|.
T Consensus 408 P~--v~~~~~-~~~~~~~~~rf~~~p~i~~~~~l~v~Gdv~fg~~v~l~G~v~i~a~~--~~~~~ip~g~ 472 (488)
T 2i5k_A 408 PL--IKLGSH-FKKVSGFNARIPHIPKIVELDHLTITGNVFLGKDVTLRGTVIIVCSD--GHKIDIPNGS 472 (488)
T ss_dssp CE--EEECGG-GSSHHHHHHHCSSCCBCTTEEEEEEESSEEECTTCEEEEEEEEECCT--TCCEEECTTC
T ss_pred Ce--EEECCc-ccchhhHHhhcCCCccccccceEEEEeeeEEcCCcEEEEEEEEEcCC--CCeEEeCCCC
Confidence 86 999998 6799999999999 899999999999999999999999999999988 7755556655
No 10
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.46 E-value=1.4e-06 Score=95.49 Aligned_cols=192 Identities=15% Similarity=0.164 Sum_probs=129.8
Q ss_pred CcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHH
Q 007226 35 PELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERI 114 (612)
Q Consensus 35 ~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T 114 (612)
..+|+|+||||.||||...-||- ++|+ .||+++++.++.+..+. .--++|.++. -.+..
T Consensus 11 ~~~~vvILAaG~GtRm~~~~pK~--l~pv-----~gkp~i~~~l~~~~~~g-----------~~~i~vv~~~---~~~~i 69 (501)
T 3st8_A 11 GDTAVLVLAAGPGTRMRSDTPKV--LHTL-----AGRSMLSHVLHAIAKLA-----------PQRLIVVLGH---DHQRI 69 (501)
T ss_dssp -CEEEEEEECSCCGGGCCSSCGG--GCEE-----TTEEHHHHHHHHHHHHC-----------CSEEEEEECT---THHHH
T ss_pred CCceEEEECCcCcccCCCCCCHH--HeEE-----CChhHHHHHHHHHHhCC-----------CCEEEEEeCC---CHHHH
Confidence 37899999999999999988999 9888 69999999999887653 2257888887 67889
Q ss_pred HHHHHHc-ccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCch-HhHHHHhcCchhHHHHCCcEEEEEEe
Q 007226 115 TSLCERL-RWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGA-IWKLAHDKGIFKWFHDNGRKGATVRQ 192 (612)
Q Consensus 115 ~~~le~~-~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGd-I~~aL~~sGlLd~l~~~Gikyv~v~~ 192 (612)
+++|.+. +.||. ++.+..|. .|-|=|+ |+.++ +.+.+.-...+.+.+
T Consensus 70 ~~~~~~~~~~~~~---~i~~~~q~----------------------~~lGTa~Av~~a~------~~l~~~~~~~~lvl~ 118 (501)
T 3st8_A 70 APLVGELADTLGR---TIDVALQD----------------------RPLGTGHAVLCGL------SALPDDYAGNVVVTS 118 (501)
T ss_dssp HHHHHHHHHHHTS---CCEEEECS----------------------SCCCHHHHHHHHH------TTSCTTCCSEEEEEE
T ss_pred HHHHHHHHHhcCC---cEEEEEcC----------------------CCCCcHHHHHHHH------HHhccccccceeeec
Confidence 9999863 45554 45555553 2335443 33332 223233346788888
Q ss_pred cCCCccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCCCCC
Q 007226 193 VSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNG 272 (612)
Q Consensus 193 vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~dg~ 272 (612)
.|.++...|. +..++-++...+.++.+.+ .+...| .+-|++.. ..+|+ ....+|.-+.+++...
T Consensus 119 gd~~l~~~~~-~~~l~~~h~~~~~~~ti~~-~~~~dp-~~yG~i~~--~~~g~---v~~ivEk~~~~~~~~~-------- 182 (501)
T 3st8_A 119 GDTPLLDADT-LADLIATHRAVSAAVTVLT-TTLDDP-FGYGRILR--TQDHE---VMAIVEQTDATPSQRE-------- 182 (501)
T ss_dssp TTCTTCCHHH-HHHHHHHHHHTTCSEEEEE-EECSCC-TTSCEEEE--CTTCC---EEEEECGGGCCHHHHH--------
T ss_pred CcceeecHHH-HHHHHHHHhhccccceEee-eccCCc-hhcccccc--cccee---EEeeccccCCChhhcc--------
Confidence 8888876543 2244666677777877775 443433 45677765 36776 3557777666554311
Q ss_pred ccccccceeeEEEEeHHHHHhhhcc
Q 007226 273 LQADFPANTNILYVDLASAELVGSS 297 (612)
Q Consensus 273 ~~s~f~~Ninnl~~~L~~l~~~l~~ 297 (612)
..-.|+...+|+-+.|++.+.+
T Consensus 183 ---i~~in~Giy~f~~~~l~~~l~~ 204 (501)
T 3st8_A 183 ---IREVNAGVYAFDIAALRSALSR 204 (501)
T ss_dssp ---CCEEEEEEEEEEHHHHHHHHTT
T ss_pred ---ceeeeceeeeecchhHHHhhhh
Confidence 1124999999999999988763
No 11
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=97.80 E-value=0.00015 Score=72.41 Aligned_cols=191 Identities=10% Similarity=0.052 Sum_probs=111.5
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++.+|+||||.||||+ +|- ++|+ .||+++++.++++.+. | + -.++|-|. ++.+.
T Consensus 2 ~~~aiIlA~G~stRlp---~K~--L~~i-----~GkPli~~~l~~l~~~--------~--~-~~ivVv~~-----~~~i~ 55 (252)
T 3oam_A 2 SFTVVIPARYQSTRLP---GKP--LADI-----GGKPMIQWVYEQAMQA--------G--A-DRVIIATD-----DERVE 55 (252)
T ss_dssp CEEEEEECCCCCSSST---TGG--GCEE-----TTEEHHHHHHHHHHHT--------T--C-SEEEEEES-----CHHHH
T ss_pred ceEEEEecCcCCCCCC---Ccc--eeeE-----CCEEHHHHHHHHHHhC--------C--C-CeEEEECC-----HHHHH
Confidence 5788999999999996 788 8887 7999999999987654 2 1 14566663 37788
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEEEEEEecCC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSN 195 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN 195 (612)
+++++ ||. ++. +. . .-.|.|-|.++.++.. +...+-+++.+.+.|+
T Consensus 56 ~~~~~---~g~---~v~---------~~-~------------~~~~~Gt~~~~~~~~~------l~~~~~d~vlv~~gD~ 101 (252)
T 3oam_A 56 QAVQA---FGG---VVC---------MT-S------------PNHQSGTERLAEVVAK------MAIPADHIVVNVQGDE 101 (252)
T ss_dssp HHHHH---TTC---EEE---------EC-C------------TTCCSHHHHHHHHHHH------TTCCTTSEEEECCTTC
T ss_pred HHHHH---cCC---EEE---------Ec-C------------CCCCCcHHHHHHHHHh------cCcCCCCEEEEEeCCe
Confidence 88875 343 121 11 0 1134666777766542 2112457899999999
Q ss_pred CccccchhhHHHhhhhhhcCCceeEEEEeecCCCcc----cceEEEEEecCCCceecceEEEEecccCccCcCCCCCCC-
Q 007226 196 VVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATE----GINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSS- 270 (612)
Q Consensus 196 ~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e----~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~d- 270 (612)
++...+ .+-.++..+...+.++.+.+ .+-..+.+ .+|+++. ..+|+ ++.+++=|-....+.....
T Consensus 102 Pli~~~-~i~~l~~~~~~~~~~~~~~~-~~v~~~~~~~~p~~g~vv~--d~~g~------v~~fsr~~i~~~~~~~~~~~ 171 (252)
T 3oam_A 102 PLIPPA-IIRQVADNLAACSAPMATLA-VEIEDEAEVFNPNAVKVIT--DKSGY------ALYFSRATIPWDRDNFAKAD 171 (252)
T ss_dssp TTCCHH-HHHHHHHHHHHSSCSEEEEE-EEECCHHHHTCTTSCEEEE--CTTSB------EEEEESSCSSCCHHHHHSSS
T ss_pred eecCHH-HHHHHHHHHHhcCCCEEEEe-eecCCHHHhhCCCceEEEE--CCCCe------EEEEeCCCCCCCCCcccccc
Confidence 987642 12233455555566776665 32222221 2366554 25665 5555553211100000000
Q ss_pred CCccccccceeeEEEEeHHHHHhhhc
Q 007226 271 NGLQADFPANTNILYVDLASAELVGS 296 (612)
Q Consensus 271 g~~~s~f~~Ninnl~~~L~~l~~~l~ 296 (612)
......+-.|+....|+-++|++..+
T Consensus 172 ~~~~~~~~~n~GiY~~~~~~l~~~~~ 197 (252)
T 3oam_A 172 KAIVQPLLRHIGIYAYRAGFINTYLD 197 (252)
T ss_dssp CCCCSCEEEEEEEEEEETTHHHHHHH
T ss_pred ccccccceEEEEEEEcCHHHHHHHHc
Confidence 00001233499999999999988764
No 12
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=97.72 E-value=0.0019 Score=68.86 Aligned_cols=203 Identities=11% Similarity=0.037 Sum_probs=114.2
Q ss_pred CcEEEEEecCCccccCC---CCCCCCCceeeCccCCCCCC-cchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCc
Q 007226 35 PELGEIYPLGGSADRLG---LVDHETGECLPAAMLPYCGR-TLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNN 110 (612)
Q Consensus 35 ~k~avvlLaGGlGTRLG---~~~pK~g~~lpv~~~~~~gk-s~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T 110 (612)
.++..|+||||.||||+ ...||- ++|+ .|+ +++++.++++.+. | .-.++|.|+. .
T Consensus 11 ~~~~avILAaG~gtRl~plT~~~pK~--llpi-----~gk~pli~~~l~~l~~~--------g---i~~i~vv~~~---~ 69 (420)
T 3brk_X 11 RDAMAYVLAGGRGSRLKELTDRRAKP--AVYF-----GGKARIIDFALSNALNS--------G---IRRIGVATQY---K 69 (420)
T ss_dssp GGEEEEEEECCCCGGGGGGGSSSCGG--GSEE-----TTTEETHHHHHHHHHHT--------T---CCEEEEEECT---T
T ss_pred hceEEEEEcCCCCCccchhhcCCccc--cccc-----CCCCcHHHHHHHHHHhC--------C---CCeEEEEeCC---C
Confidence 36788999999999999 778998 8887 688 9999999888653 2 1257788876 5
Q ss_pred hHHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccC---CCCchHhHHHHhcCchhHHHHCCcEE
Q 007226 111 HERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKP---GGHGAIWKLAHDKGIFKWFHDNGRKG 187 (612)
Q Consensus 111 ~~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P---~GhGdI~~aL~~sGlLd~l~~~Giky 187 (612)
++...+++++. ||+... +.+..++.+... .-...| -|-+ ...+ . .++.+...+-++
T Consensus 70 ~~~i~~~~~~~--~~~~~~----~~~~~v~i~~~~----------~~~~~~~~~~Gt~--~al~-~--a~~~l~~~~~~~ 128 (420)
T 3brk_X 70 AHSLIRHLQRG--WDFFRP----ERNESFDILPAS----------QRVSETQWYEGTA--DAVY-Q--NIDIIEPYAPEY 128 (420)
T ss_dssp CHHHHHHHHHH--SCCCCG----GGTCEEEEECCC-----------------CCCCHH--HHHH-T--THHHHHHHCCSE
T ss_pred hHHHHHHHhhh--hccccc----cccCCEEEeCcc----------ccccCCccccCCH--HHHH-H--HHHHHHhcCCCE
Confidence 68888888864 454220 011111111100 000012 2332 2222 1 134444434578
Q ss_pred EEEEecCCCccccchhhHHHhhhhhhcCCceeEEEEeecC-CCcccceEEEEEecCCCceecceEEEEecccCccCcCCC
Q 007226 188 ATVRQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSS-GATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRG 266 (612)
Q Consensus 188 v~v~~vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~-~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~ 266 (612)
+.|.+.|.+ ...| +-.++..+...++++.+.+ .+.+ ....+-|++.. ..+|+ ++++.|=|......
T Consensus 129 ~lv~~~D~~-~~~~--l~~l~~~~~~~~~~~tl~~-~~~~~~~~~~~g~v~~--d~~g~------v~~~~ekp~~~~~~- 195 (420)
T 3brk_X 129 MVILAGDHI-YKMD--YEYMLQQHVDSGADVTIGC-LEVPRMEATGFGVMHV--NEKDE------IIDFIEKPADPPGI- 195 (420)
T ss_dssp EEEEESSCE-ECBC--THHHHHHHHHTTCSEEEEE-EEEETTGGGGSEEEEE--CTTSB------EEEEEESCSSCCCB-
T ss_pred EEEecccEE-EchH--HHHHHHHHHHcCCeEEEEE-eecCccccCcccEEEE--CCCCc------EEEeEeCCCccccc-
Confidence 999999994 3333 3344666666677766554 3222 22335677754 24555 33444422211000
Q ss_pred CCCCCCccccccceeeEEEEeHHHHHhhhc
Q 007226 267 PFSSNGLQADFPANTNILYVDLASAELVGS 296 (612)
Q Consensus 267 ~~~dg~~~s~f~~Ninnl~~~L~~l~~~l~ 296 (612)
. +. ...+-.|+...+|+-+.+.+.++
T Consensus 196 -~-~~--~~~~~~~~Giy~~~~~~l~~~l~ 221 (420)
T 3brk_X 196 -P-GN--EGFALASMGIYVFHTKFLMEAVR 221 (420)
T ss_dssp -T-TB--TTEEEEEEEEEEEEHHHHHHHHT
T ss_pred -c-cc--ccceEEeeeeEEEeHHHHHHHHH
Confidence 0 00 01344599999999998877664
No 13
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=97.66 E-value=0.00076 Score=67.66 Aligned_cols=178 Identities=20% Similarity=0.132 Sum_probs=107.4
Q ss_pred cEEEEEecCCccccCCC---CCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchH
Q 007226 36 ELGEIYPLGGSADRLGL---VDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHE 112 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~---~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~ 112 (612)
++..|+||||.||||+- ..||. ++|+ .|++++++.++++.+. | .-.++|.|.. +..+
T Consensus 24 ~m~aiIlAaG~g~Rl~~lt~~~pK~--ll~i-----~g~pli~~~l~~l~~~--------g---~~~iivv~~~--~~~~ 83 (269)
T 4ecm_A 24 AMKGIILAGGTGSRLYPITKVTNKH--LLPV-----GRYPMIYHAVYKLKQC--------D---ITDIMIITGK--EHMG 83 (269)
T ss_dssp CEEEEEECCSCCGGGTTTTSSSCGG--GSEE-----TTEEHHHHHHHHHHHT--------T---CCEEEEEECT--TTHH
T ss_pred CcEEEEECCCCccccccccCCCCce--ecEE-----CCEEHHHHHHHHHHHC--------C---CCEEEEECCh--hhHH
Confidence 57889999999999986 78898 8887 6999999999987653 2 1257777876 2346
Q ss_pred HHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEEEEEEe
Q 007226 113 RITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQ 192 (612)
Q Consensus 113 ~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gikyv~v~~ 192 (612)
...+++.....+|+ ++.+..| ..+.|-|+. +.. .++.+. -+++.|.+
T Consensus 84 ~~~~~~~~~~~~~~---~i~~~~~----------------------~~~~G~~~a---l~~--a~~~~~---~~~~lv~~ 130 (269)
T 4ecm_A 84 DVVSFLGSGQEFGV---SFTYRVQ----------------------DKAGGIAQA---LGL--CEDFVG---NDRMVVIL 130 (269)
T ss_dssp HHHHHHTTSGGGTC---EEEEEEC----------------------SSCCCHHHH---HHT--THHHHT---TSEEEEEE
T ss_pred HHHHHHhhccccCc---eEEEeeC----------------------CccCcHHHH---HHH--HHHhcC---CCcEEEEe
Confidence 77888876545554 2221111 013343322 211 122231 47899999
Q ss_pred cCCCccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCCCCC
Q 007226 193 VSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNG 272 (612)
Q Consensus 193 vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~dg~ 272 (612)
.|.+.. . .+-.++..+...+.++.+.+ .+.. ....-|++.. .+|+ ++++.|=|.. .
T Consensus 131 ~D~~~~-~--~l~~l~~~~~~~~~~~~~~~-~~~~-~~~~~g~v~~---d~g~------v~~~~ekp~~-------~--- 186 (269)
T 4ecm_A 131 GDNIFS-D--DIRPYVEEFTNQKEGAKVLL-QSVD-DPERFGVANI---QNRK------IIEIEEKPKE-------P--- 186 (269)
T ss_dssp TTEEES-S--CSHHHHHHHHTSSSSEEEEE-EECS-CGGGSEEEEE---ETTE------EEEEEESCSS-------C---
T ss_pred CCccCc-c--CHHHHHHHHHhcCCCeEEEE-EECC-CCCCceEEEE---cCCE------EEEEEECCCC-------C---
Confidence 999764 3 23344556666667766654 3322 2345677754 3565 3344332211 0
Q ss_pred ccccccceeeEEEEeHHHHH
Q 007226 273 LQADFPANTNILYVDLASAE 292 (612)
Q Consensus 273 ~~s~f~~Ninnl~~~L~~l~ 292 (612)
..+..|+...+|+-+.++
T Consensus 187 --~~~~~~~Giy~~~~~~l~ 204 (269)
T 4ecm_A 187 --KSSYAVTGIYLYDSKVFS 204 (269)
T ss_dssp --SCSEEEEEEEEECTTHHH
T ss_pred --CCcEEEEEEEEECHHHHH
Confidence 123459999999987763
No 14
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=97.50 E-value=0.0015 Score=70.07 Aligned_cols=211 Identities=12% Similarity=0.105 Sum_probs=108.0
Q ss_pred cEEEEEecCCccccCC---CCCCCCCceeeCccCCCCCC-cchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCch
Q 007226 36 ELGEIYPLGGSADRLG---LVDHETGECLPAAMLPYCGR-TLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNH 111 (612)
Q Consensus 36 k~avvlLaGGlGTRLG---~~~pK~g~~lpv~~~~~~gk-s~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~ 111 (612)
++..|+||||.||||+ ...||. ++|+ .|+ +++++.++++.+. | .-.++|.|+. .+
T Consensus 20 ~~~avILAaG~gtRl~plT~~~pK~--llpi-----~g~~pli~~~l~~l~~~--------g---~~~i~vv~~~---~~ 78 (451)
T 1yp2_A 20 SVLGIILGGGAGTRLYPLTKKRAKP--AVPL-----GANYRLIDIPVSNCLNS--------N---ISKIYVLTQF---NS 78 (451)
T ss_dssp HEEEEEC------CCTTTTTTSCGG--GCEE-----TTTEETTHHHHHHHHHT--------T---CCEEEEEESC---CC
T ss_pred ceEEEEECCCCCCcccchhcCCcce--eeEE-----CCcceeHHHHHHHHHHC--------C---CCEEEEEecc---CH
Confidence 4778999999999999 677998 8887 688 9999999887653 2 1257888887 66
Q ss_pred HHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCch-HhHHHHhcCchhHHHHCCcEEEEE
Q 007226 112 ERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGA-IWKLAHDKGIFKWFHDNGRKGATV 190 (612)
Q Consensus 112 ~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGd-I~~aL~~sGlLd~l~~~Gikyv~v 190 (612)
+...++|.+. +|.+-. .++.++.+..+.... .+. -...+-|-|+ ++.+ ++.+.+.+-+++.|
T Consensus 79 ~~i~~~~~~~--~~~~~~--~~~~~~~v~i~~~~~------~~~-~~~~~~Gt~~al~~a------~~~~~~~~~~~~lv 141 (451)
T 1yp2_A 79 ASLNRHLSRA--YASNMG--GYKNEGFVEVLAAQQ------SPE-NPDWFQGTADAVRQY------LWLFEEHTVLEYLI 141 (451)
T ss_dssp HHHHHHHHHH--CC----------CCEEEEEESCS------STT-SCCCCCSHHHHHHHT------HHHHTTSCCSEEEE
T ss_pred HHHHHHHhhh--hhcccc--cccccCcEEEecccc------ccc-ccccccCcHHHHHHH------HHHHHhcCCCeEEE
Confidence 7888888752 221000 011222222222100 000 0011234432 3322 23333334588999
Q ss_pred EecCCCccccchhhHHHhhhhhhcCCceeEEEEeecC-CCcccceEEEEEecCCCceecceEEEEecccCccCc-CCCCC
Q 007226 191 RQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSS-GATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGI-TRGPF 268 (612)
Q Consensus 191 ~~vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~-~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~-~~~~~ 268 (612)
.+.|++ ...| +-.++..+...++++.+.+ .+.. .+..+-|++.. ..+|+ ++++.|=|+... ..-+.
T Consensus 142 ~~~D~~-~~~~--l~~l~~~~~~~~~~~tl~~-~~~~~~~~~~~g~v~~--d~~~~------v~~~~ekp~~~~~~~~~~ 209 (451)
T 1yp2_A 142 LAGDHL-YRMD--YEKFIQAHRETDADITVAA-LPMDEKRATAFGLMKI--DEEGR------IIEFAEKPQGEQLQAMKV 209 (451)
T ss_dssp ECSCEE-CCCC--HHHHHHHHHHTTCSEEEEE-EEECHHHHTTSEEEEE--CTTSB------EEEEEESCCHHHHHHTCC
T ss_pred ecCcEE-EcCC--HHHHHHHHHHcCCcEEEEE-EEcChhhcccCCEEEE--CCCCC------EEEEEECCCchhhccccc
Confidence 999993 3333 4345666666677765553 2221 12234677654 23454 445544333210 00000
Q ss_pred CCCCc--------c-ccccceeeEEEEeHHHHHhhhcc
Q 007226 269 SSNGL--------Q-ADFPANTNILYVDLASAELVGSS 297 (612)
Q Consensus 269 ~dg~~--------~-s~f~~Ninnl~~~L~~l~~~l~~ 297 (612)
+ .+. . ..+-.|+...+|+-+.+.+.++.
T Consensus 210 ~-~~~l~~~~~~~~~~~~~~~~Giy~~~~~~l~~~l~~ 246 (451)
T 1yp2_A 210 D-TTILGLDDKRAKEMPFIASMGIYVISKDVMLNLLRD 246 (451)
T ss_dssp C-GGGGSCCHHHHHHCCEEEEEEEEEEEHHHHHHHHHT
T ss_pred c-ccccccccccccCCcceEEeeEEEEcHHHHHHHHHh
Confidence 0 000 0 12334999999999988777653
No 15
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=97.48 E-value=0.0014 Score=65.82 Aligned_cols=64 Identities=17% Similarity=0.277 Sum_probs=50.8
Q ss_pred EEEEEecCCccccCCC---CCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHH
Q 007226 37 LGEIYPLGGSADRLGL---VDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHER 113 (612)
Q Consensus 37 ~avvlLaGGlGTRLG~---~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~ 113 (612)
+.+|+||||.||||+- ..||. ++|+ .|++++++.++++.+. | .-.++|.|+. ..+.
T Consensus 3 ~~avIlAaG~gtRl~plt~~~pK~--ll~i-----~gkpli~~~l~~l~~~--------g---i~~i~vv~~~---~~~~ 61 (281)
T 3juk_A 3 KKCLFPAAGYGTRFLPITKTIPKE--MLPI-----VDKPLIQYAVEEAMEA--------G---CEVMAIVTGR---NKRS 61 (281)
T ss_dssp CEEEEECCSCCGGGTTGGGTSCGG--GCBS-----SSSBHHHHHHHHHHHH--------T---CCEEEEEECT---THHH
T ss_pred eEEEEECCcCCcccCccccCCCcc--cceE-----CCEEHHHHHHHHHHhC--------C---CCEEEEEecC---CHHH
Confidence 4578899999999987 78898 8887 6899999999998764 2 2257888886 6688
Q ss_pred HHHHHHHc
Q 007226 114 ITSLCERL 121 (612)
Q Consensus 114 T~~~le~~ 121 (612)
+.++|.+.
T Consensus 62 i~~~~~~~ 69 (281)
T 3juk_A 62 LEDYFDTS 69 (281)
T ss_dssp HHHHTSCC
T ss_pred HHHHHhcc
Confidence 88887654
No 16
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=97.48 E-value=0.0021 Score=65.81 Aligned_cols=180 Identities=18% Similarity=0.192 Sum_probs=102.4
Q ss_pred EEEEEecCCccccCC---CCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHH
Q 007226 37 LGEIYPLGGSADRLG---LVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHER 113 (612)
Q Consensus 37 ~avvlLaGGlGTRLG---~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~ 113 (612)
+..|+||||.||||+ ...||. ++|+ .|++++++.++.+... | + -.++|.|+. ...+.
T Consensus 3 ~~aIILAgG~gtRl~plT~~~pK~--llpi-----~gkpli~~~l~~l~~~--------g--i-~~I~vv~~~--~~~~~ 62 (293)
T 1fxo_A 3 RKGIILAGGSGTRLHPATLAISKQ--LLPV-----YDKPMIYYPLSTLMLA--------G--I-REILIISTP--QDTPR 62 (293)
T ss_dssp EEEEEECCCCCTTTTTHHHHSCGG--GSEE-----TTEETTHHHHHHHHHT--------T--C-CEEEEEECT--TTHHH
T ss_pred ceEEEECCCCCCcCccccCCCCce--eCeE-----CCEeHHHHHHHHHHHC--------C--C-CEEEEEecc--ccHHH
Confidence 567889999999998 456888 8887 6899999999887542 2 1 145666655 25677
Q ss_pred HHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHh-HHHHhcCchhHHHHCCcEEEEEEe
Q 007226 114 ITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIW-KLAHDKGIFKWFHDNGRKGATVRQ 192 (612)
Q Consensus 114 T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~-~aL~~sGlLd~l~~~Gikyv~v~~ 192 (612)
..+++.+...||+ ++.+..|+ .|.|-++.+ .++ +.+ . + +.+.+..
T Consensus 63 i~~~l~~g~~~g~---~i~~~~~~----------------------~~~G~~~al~~a~------~~i-~-~-~~~~lv~ 108 (293)
T 1fxo_A 63 FQQLLGDGSNWGL---DLQYAVQP----------------------SPDGLAQAFLIGE------SFI-G-N-DLSALVL 108 (293)
T ss_dssp HHHHHTTSGGGTC---EEEEEECS----------------------SCCCGGGHHHHTH------HHH-T-T-SEEEEEE
T ss_pred HHHHHhcccccCc---eEEEeeCC----------------------CCCCHHHHHHHHH------HHh-C-C-CCEEEEE
Confidence 7788876444554 22211111 255655433 222 222 1 1 4455566
Q ss_pred cCCCccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCCCCC
Q 007226 193 VSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNG 272 (612)
Q Consensus 193 vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~dg~ 272 (612)
.||++... .+-.++..+...+.+..+.+ .+-. ..++-|++.. ..+|+ ++++.|-|.. ..
T Consensus 109 gD~~~~~~--~l~~~l~~~~~~~~~~~v~~-~~v~-dp~~~g~v~~--d~~g~------v~~~~ekp~~--------~~- 167 (293)
T 1fxo_A 109 GDNLYYGH--DFHELLGSASQRQTGASVFA-YHVL-DPERYGVVEF--DQGGK------AISLEEKPLE--------PK- 167 (293)
T ss_dssp TTEEEECT--THHHHHHHHHTCCSSEEEEE-EECS-CGGGSEEEEE--CTTSC------EEEEEESCSS--------CS-
T ss_pred CChhccCc--cHHHHHHHHHhcCCCcEEEE-EECC-CcccCcEEEE--CCCCc------EEEEEECCCC--------CC-
Confidence 99998653 33334544444445544433 3322 3346787754 24565 3333332211 01
Q ss_pred ccccccceeeEEEEeHHHHHhh
Q 007226 273 LQADFPANTNILYVDLASAELV 294 (612)
Q Consensus 273 ~~s~f~~Ninnl~~~L~~l~~~ 294 (612)
+ +..|+...+|+-+.++.+
T Consensus 168 --s-~~~~~Giy~~~~~~l~~~ 186 (293)
T 1fxo_A 168 --S-NYAVTGLYFYDQQVVDIA 186 (293)
T ss_dssp --S-SEEEEEEEEECTTHHHHH
T ss_pred --C-CeEEEEEEEEcHHHHHHH
Confidence 1 235899999998876543
No 17
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=97.44 E-value=0.0015 Score=69.78 Aligned_cols=180 Identities=14% Similarity=0.116 Sum_probs=105.0
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++..|+||||.|||||-+.||. ++|+ .|++++++.++++.+.. .-.++|.|+. .++.+.
T Consensus 8 ~~~aiIlA~G~g~Rl~~~~pK~--l~~i-----~g~pli~~~l~~l~~~~-----------~~~i~vv~~~---~~~~i~ 66 (459)
T 4fce_A 8 SMSVVILAAGKGTRMYSDLPKV--LHPL-----AGKPMVQHVIDAAMKLG-----------AQHVHLVYGH---GGELLK 66 (459)
T ss_dssp CEEEEEEECCCCGGGCCSSCGG--GSEE-----TTEEHHHHHHHHHHHHT-----------CSCEEEEESS---CHHHHH
T ss_pred cceEEEECCCCCccCCCCCCcc--cCee-----CCeeHHHHHHHHHHhCC-----------CCcEEEEeCC---CHHHHH
Confidence 6889999999999999888998 8887 69999999999887652 1257888887 467777
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCC-chHhHHHHhcCchhHHHHCCcEEEEEEecC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGH-GAIWKLAHDKGIFKWFHDNGRKGATVRQVS 194 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~Gh-GdI~~aL~~sGlLd~l~~~Gikyv~v~~vD 194 (612)
+++++. .+.+..| . .+-|- +.++.+|.. +. .-+++.+.+.|
T Consensus 67 ~~~~~~--------~~~~v~~--------~--------------~~~g~~~~i~~~~~~------~~--~~~~~lv~~~D 108 (459)
T 4fce_A 67 KTLADP--------SLNWVLQ--------A--------------EQLGTGHAMQQAAPH------FA--DDEDILMLYGD 108 (459)
T ss_dssp HHC-------------CEEEC--------S--------------SCCCHHHHHHHHGGG------SC--TTSEEEEEETT
T ss_pred HHhccC--------CcEEEeC--------C--------------CCCCcHHHHHHHHHh------cC--CCCcEEEEeCC
Confidence 776642 1111111 0 11232 234444432 21 34799999999
Q ss_pred CCccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCCCCCcc
Q 007226 195 NVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQ 274 (612)
Q Consensus 195 N~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~dg~~~ 274 (612)
.++...+ .+-.++-.. ...+..+.+ .+... ..+-|++.. .+|+ +.++.+=++... .. .
T Consensus 109 ~P~i~~~-~i~~l~~~~--~~~~~~~~~-~~~~~-~~~~g~v~~---~~g~------v~~~~ek~~~~~-------~~-~ 166 (459)
T 4fce_A 109 VPLISVD-TLQRLLAAK--PEGGIGLLT-VKLDN-PSGYGRIVR---ENGD------VVGIVEHKDASD-------AQ-R 166 (459)
T ss_dssp CTTCCHH-HHHHHHHHC--CTTSEEEEE-EECSC-CTTSCEEEE---ETTE------EEEEECGGGCCT-------TG-G
T ss_pred cccCCHH-HHHHHHHHH--hhCCEEEEE-EecCC-CCcccEEEe---CCCc------EEEEEECCCCCh-------HH-h
Confidence 9887641 121223222 234444443 33222 234566654 3665 334433222110 00 1
Q ss_pred ccccceeeEEEEeHHHHHhhhc
Q 007226 275 ADFPANTNILYVDLASAELVGS 296 (612)
Q Consensus 275 s~f~~Ninnl~~~L~~l~~~l~ 296 (612)
..+-.|+...+|+-+.+.+.++
T Consensus 167 ~~~~~~~Giy~~~~~~l~~~l~ 188 (459)
T 4fce_A 167 EINEINTGILVANGRDLKRWLS 188 (459)
T ss_dssp GCCEEEEEEEEEEHHHHHHHHH
T ss_pred hccEEEEEEEEEEHHHHHHHHH
Confidence 1233499999999998887765
No 18
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=97.43 E-value=0.0057 Score=61.63 Aligned_cols=189 Identities=16% Similarity=0.124 Sum_probs=104.4
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++.+|+||||.||||+ +|- ++|+ .||+++++.++++.+. | + -.++|-|.. +.+.
T Consensus 9 ~~~aIIlA~G~stRl~---~K~--L~~i-----~GkPli~~~l~~l~~~--------~--i-~~VvVvt~~-----~~i~ 62 (256)
T 3tqd_A 9 EFRVIIPARFDSTRLP---GKA--LVDI-----AGKPMIQHVYESAIKS--------G--A-EEVVIATDD-----KRIR 62 (256)
T ss_dssp CCEEEEECCCC---CT---TGG--GCEE-----TTEEHHHHHHHHHHHT--------T--C-SEEEEEESC-----HHHH
T ss_pred CceEEEEcCCCCCCCC---CCC--eeeE-----CCchHHHHHHHHHHhC--------C--C-CEEEEECCH-----HHHH
Confidence 6788999999999997 788 8887 7999999999987653 2 1 134555532 6777
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEEEEEEecCC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSN 195 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN 195 (612)
+++++ ||. ++. +. . .-.|.|-+.++.++.. +...+.+++.+.+.|+
T Consensus 63 ~~~~~---~g~---~v~---------~~-~------------~~~~~Gt~~i~~a~~~------l~~~~~d~vlv~~gD~ 108 (256)
T 3tqd_A 63 QVAED---FGA---VVC---------MT-S------------SDHQSGTERIAEAAVA------LGFEDDEIIVCLQGDE 108 (256)
T ss_dssp HHHHH---TTC---EEE---------EC-C------------TTCCSHHHHHHHHHHH------TTCCTTCEEEEECTTC
T ss_pred HHHHH---cCC---eEE---------Ee-C------------CCCCCcHHHHHHHHHH------hCcCCCCEEEEEeCCc
Confidence 77775 443 111 11 0 1134566667666532 2113568999999999
Q ss_pred CccccchhhHHHhhhhhhc-CCceeEEEEeec-----CCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCC
Q 007226 196 VVAATDLTLLALAGIGLHH-GKKLGFASCKRS-----SGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFS 269 (612)
Q Consensus 196 ~la~~Dp~i~~~~G~~~~~-~~~~~~~~v~rK-----~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~ 269 (612)
++...+ .+-.++...... +.++...+++=+ .++. -++|++. .+|+ ++.+++=|--...+. ..
T Consensus 109 Pli~~~-~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~-~vkvv~d---~~g~------~l~fsr~pip~~r~~-~~ 176 (256)
T 3tqd_A 109 PLIPPD-AIRKLAEDLDEHDNVKVASLCTPITEVDELFNPH-STKVVLN---RRNY------ALYFSHAPIPWGRDT-FS 176 (256)
T ss_dssp CCCCHH-HHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTT-SCEEEEC---TTSB------EEEEESSCSSCCTTT-TT
T ss_pred ccCCHH-HHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCC-ccEEEEC---CCCE------EeEEecCCCCCCCcc-cc
Confidence 997641 111223343332 344554442211 1121 2567654 6776 444554332111100 00
Q ss_pred CCC---ccccccceeeEEEEeHHHHHhhhc
Q 007226 270 SNG---LQADFPANTNILYVDLASAELVGS 296 (612)
Q Consensus 270 dg~---~~s~f~~Ninnl~~~L~~l~~~l~ 296 (612)
... ....|-.|+....|+-++|++..+
T Consensus 177 ~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~ 206 (256)
T 3tqd_A 177 DKENLQLNGSHYRHVGIYAYRVGFLEEYLS 206 (256)
T ss_dssp CGGGCCCSSCCEEEEEEEEEEHHHHHHHHH
T ss_pred cccccccCCcceEEEEEEEcCHHHHHHHHh
Confidence 000 001343599999999999988753
No 19
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=97.37 E-value=0.00053 Score=70.41 Aligned_cols=192 Identities=10% Similarity=-0.023 Sum_probs=98.4
Q ss_pred cEEEEEecCCccccCC---C-CCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCch
Q 007226 36 ELGEIYPLGGSADRLG---L-VDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNH 111 (612)
Q Consensus 36 k~avvlLaGGlGTRLG---~-~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~ 111 (612)
++..|+||||.||||+ . ..||. ++|+. .|++++++.++++.+. .-.++|.|+. ...
T Consensus 4 ~~~avIlAgG~gtRl~plt~~~~pK~--ll~i~----gg~pli~~~l~~l~~~------------~~~i~vv~~~--~~~ 63 (308)
T 2qh5_A 4 KIKNILLSGGSGKRLWPLSRSLYPKQ--FLKLF----DHKSLFELSFKRNASL------------VDETLIVCNE--KHY 63 (308)
T ss_dssp CEEEEEECC-------------CCGG--GCTTB----TTBCHHHHHHHHHHTT------------CSEEEEEEEG--GGH
T ss_pred ccEEEEEcCCCCccCCccCCCCCCCE--EEECC----CCCCHHHHHHHHHHcc------------CCCEEEEECh--hHH
Confidence 4677889999999996 2 47898 88874 5999999998887543 1156788876 234
Q ss_pred HHHHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchH-hHHHHhcCchhHHHHCCcEEEEE
Q 007226 112 ERITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAI-WKLAHDKGIFKWFHDNGRKGATV 190 (612)
Q Consensus 112 ~~T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI-~~aL~~sGlLd~l~~~Gikyv~v 190 (612)
+.+.+++++. ||++ ++.+..|+ .|.|-|+. +.++.. + ..-.++.|
T Consensus 64 ~~i~~~~~~~--~~~~--~~~~i~~~----------------------~~~gt~~al~~a~~~---l-----~~~~~~lv 109 (308)
T 2qh5_A 64 FLALEEIKNE--IKNK--SVGFLLES----------------------LSKNTANAIALSALM---S-----DKEDLLIV 109 (308)
T ss_dssp HHHHHHTTTT--CSSC--EEEEEEES----------------------SCCCHHHHHHHHHHT---S-----CTTSEEEE
T ss_pred HHHHHHHHHh--hCCC--ccEEEeCC----------------------CCCChHHHHHHHHHH---h-----CCCCeEEE
Confidence 6777777653 4431 22221120 13344443 333321 1 12347899
Q ss_pred EecCCCccccchhhHHHhhh---hhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCC
Q 007226 191 RQVSNVVAATDLTLLALAGI---GLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGP 267 (612)
Q Consensus 191 ~~vDN~la~~Dp~i~~~~G~---~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~ 267 (612)
.+.|.++...| .|-.++.. ....+..+.+.+ . ...+..+-|++.. ..+|+ ++++.|=|.......-
T Consensus 110 ~~~D~~~~~~~-~~~~~~~~~~~~~~~~~~~t~~~-~-~~~~~~~~g~i~~--d~~~~------V~~~~Ekp~~~~~~~~ 178 (308)
T 2qh5_A 110 TPSDHLIKDLQ-AYENAIKKAIDLAQKGFLVTFGV-S-IDKPNTEFGYIES--PNGLD------VKRFIEKPSLDKAIEF 178 (308)
T ss_dssp EESSCBCCCHH-HHHHHHHHHHHHHHTTCEEEEEE-E-CSSCCTTSEEEEC--SSSSB------CSEEEESCCHHHHHHH
T ss_pred EcCCccccCHH-HHHHHHHHHHHHHhcCCEEEEEE-e-cCCCCCCceEEEE--CCCCE------EEEEEECCChHHHHHH
Confidence 99999875433 13333443 233444444443 3 3344456787743 12344 2333332221100000
Q ss_pred CCCCCccccccceeeEEEEeHHHHHhhhc
Q 007226 268 FSSNGLQADFPANTNILYVDLASAELVGS 296 (612)
Q Consensus 268 ~~dg~~~s~f~~Ninnl~~~L~~l~~~l~ 296 (612)
..++ .|..|+...+|+-+.+.+.++
T Consensus 179 ~~~g----~~~~n~Giy~~~~~~ll~~l~ 203 (308)
T 2qh5_A 179 QKSG----GFYFNSGMFVFQAGVFLDELK 203 (308)
T ss_dssp HHHC----CEEEEEEEEEEEHHHHHHHHH
T ss_pred hhcC----CeEEEeEEEEEEHHHHHHHHH
Confidence 0001 244699999999888766554
No 20
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=97.17 E-value=0.0036 Score=66.81 Aligned_cols=180 Identities=13% Similarity=0.111 Sum_probs=101.0
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++..|+||||.|||||-..||. ++|+ .|++++++.++++.... .-.++|.|+. ..+...
T Consensus 5 ~~~aiIlA~G~g~Rl~~~~pK~--l~~i-----~gkpli~~~l~~l~~~~-----------~~~iivv~~~---~~~~i~ 63 (456)
T 2v0h_A 5 ALSAVILAAGKGTRMYSDLPKV--LHTI-----AGKPMVKHVIDTAHQLG-----------SENIHLIYGH---GGDLMR 63 (456)
T ss_dssp CEEEEEECCCCCGGGCSSSCGG--GSEE-----TTEEHHHHHHHHHHHTT-----------CSCEEEEECT---THHHHH
T ss_pred cceEEEECCCCCcccCCCCCcc--ccEE-----CCccHHHHHHHHHHhCC-----------CCcEEEEeCC---CHHHHH
Confidence 5778999999999999777998 8887 68999999998876542 1146777876 456666
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCc-hHhHHHHhcCchhHHHHCCcEEEEEEecC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHG-AIWKLAHDKGIFKWFHDNGRKGATVRQVS 194 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhG-dI~~aL~~sGlLd~l~~~Gikyv~v~~vD 194 (612)
+++.++ .+.+..| + .+-|-+ .++.++. .+. .-+++.+.+.|
T Consensus 64 ~~~~~~--------~~~~v~~---------~-------------~~~g~~~~~~~~~~------~~~--~~~~vlv~~~D 105 (456)
T 2v0h_A 64 THLANE--------QVNWVLQ---------T-------------EQLGTAHAVQQAAP------FFK--DNENIVVLYGD 105 (456)
T ss_dssp HHTTTC--------CCEEEEC---------S-------------CCCCHHHHHHHHGG------GCC--TTSEEEEEETT
T ss_pred HHhhcC--------CcEEEeC---------C-------------CCCCcHHHHHHHHH------hcC--CCCeEEEEcCC
Confidence 665532 1222111 0 122322 3333332 221 14789999999
Q ss_pred CCccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCCCCCcc
Q 007226 195 NVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQ 274 (612)
Q Consensus 195 N~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~dg~~~ 274 (612)
.++...+ .+-.++..... .+..+.+ .+...+ .+-|.+.. .+|+ ....+|.....+.. .
T Consensus 106 ~P~i~~~-~i~~l~~~~~~--~~~~~~~-~~~~~~-~~~g~v~~---~~g~---v~~~~ek~~~~~~~-----------~ 163 (456)
T 2v0h_A 106 APLITKE-TLEKLIEAKPE--NGIALLT-VNLDNP-TGYGRIIR---ENGN---VVAIVEQKDANAEQ-----------L 163 (456)
T ss_dssp CTTCCHH-HHHHHHHHCCT--TSEEEEE-EECSSC-TTSCEEEE---ETTE---EEEEECTTTCCHHH-----------H
T ss_pred cceeCHH-HHHHHHHHHhc--CCEEEEE-eecCCC-CccceEEE---cCCc---EEEEEECCCCChhH-----------h
Confidence 9987641 12122332222 3444433 332222 33556643 2554 12233332211100 0
Q ss_pred ccccceeeEEEEeHHHHHhhhc
Q 007226 275 ADFPANTNILYVDLASAELVGS 296 (612)
Q Consensus 275 s~f~~Ninnl~~~L~~l~~~l~ 296 (612)
..+..|+....|+.+.+.+.++
T Consensus 164 ~~~~~~~Giy~~~~~~l~~~l~ 185 (456)
T 2v0h_A 164 NIKEVNTGVMVSDGASFKKWLA 185 (456)
T ss_dssp TCCEEEEEEEEEEHHHHHHHHT
T ss_pred cCcEEEEEEEEEEHHHHHHHHH
Confidence 1233599999999988877765
No 21
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=97.15 E-value=0.0028 Score=64.22 Aligned_cols=189 Identities=11% Similarity=0.094 Sum_probs=110.6
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++.+|+||||.||||+ .|- ++|+ .||+++++.++++.+. | + -.++|-|.. +.+.
T Consensus 18 ~~~aIIlA~G~stRlp---~K~--L~~i-----~GkPmi~~~l~~l~~~--------~--i-~~IvV~t~~-----~~i~ 71 (264)
T 3k8d_A 18 SFVVIIPARYASTRLP---GKP--LVDI-----NGKPMIVHVLERARES--------G--A-ERIIVATDH-----EDVA 71 (264)
T ss_dssp CCEEEEECCSCCSSST---TGG--GCEE-----TTEEHHHHHHHHHHHT--------T--C-SEEEEEESC-----HHHH
T ss_pred ceEEEEEcCCCCCCCC---Ccc--eeeE-----CCeEHHHHHHHHHHhC--------C--C-CEEEEECCH-----HHHH
Confidence 5788999999999996 487 8877 7999999999987653 2 1 145666632 6677
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEEEEEEecCC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSN 195 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN 195 (612)
+++++ ||. ++. +. . ...|.|-|.+..++.. +...+.+++.+.+.|+
T Consensus 72 ~~~~~---~g~---~v~---------~~-~------------~~~~~Gt~~i~~~~~~------l~~~~~d~vlv~~gD~ 117 (264)
T 3k8d_A 72 RAVEA---AGG---EVC---------MT-R------------ADHQSGTERLAEVVEK------CAFSDDTVIVNVQGDE 117 (264)
T ss_dssp HHHHH---TTC---EEE---------EC-C------------TTCCSHHHHHHHHHHH------HTCCTTCEEEEECTTC
T ss_pred HHHHH---cCC---EEE---------Ee-c------------CCCCCCHHHHHHHHHH------hccCCCCEEEEEcCCc
Confidence 77764 343 111 11 0 0134566666666532 2113568999999999
Q ss_pred CccccchhhHHHhhhhhhcCCceeEEEEeecCCCcc-----cceEEEEEecCCCceecceEEEEecccCc-cCcCCCCC-
Q 007226 196 VVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATE-----GINVLIEKKNLDGKWAYGLSCIEYTEFDK-FGITRGPF- 268 (612)
Q Consensus 196 ~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e-----~vGvl~~~~~~dG~~~~~~~vVEYsel~~-~~~~~~~~- 268 (612)
++...+ .+-.++......++++.+.+++ -..+.+ -++++.. .+|+ ++.+++=|. ........
T Consensus 118 Pli~~~-~i~~li~~~~~~~~~~~~~~~~-v~d~~~~~~p~~vkVv~d---~~g~------~l~fsr~~ip~~r~~~~~~ 186 (264)
T 3k8d_A 118 PMIPAT-IIRQVADNLAQRQVGMATLAVP-IHNAEEAFNPNAVKVVLD---AEGY------ALYFSRATIPWDRDRFAEG 186 (264)
T ss_dssp TTCCHH-HHHHHHHHHHTSSCSEEEEEEE-CCSHHHHTCTTSCEEEEC---TTSB------EEEEESSCCSCCHHHHHHC
T ss_pred ccCCHH-HHHHHHHHHhhcCCCEEEEEEE-cCCHHHccCCCceEEEEC---CCCe------EEEEecCCCCCCCcccccc
Confidence 997652 1213344445556677766532 221111 1456643 6776 555666432 11100000
Q ss_pred CCCCccccccceeeEEEEeHHHHHhhhc
Q 007226 269 SSNGLQADFPANTNILYVDLASAELVGS 296 (612)
Q Consensus 269 ~dg~~~s~f~~Ninnl~~~L~~l~~~l~ 296 (612)
.... ...|-.|+....|+-+++++...
T Consensus 187 ~~~~-~~~~~~~~GiY~y~~~~l~~~~~ 213 (264)
T 3k8d_A 187 LETV-GDNFLRHLGIYGYRAGFIRRYVN 213 (264)
T ss_dssp SSCC-CSCCEEECSEEEEEHHHHHHHHH
T ss_pred cccc-CCcceEEEEEEEECHHHHHHHHh
Confidence 0000 01344599999999999988753
No 22
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=97.14 E-value=0.0086 Score=61.33 Aligned_cols=180 Identities=16% Similarity=0.123 Sum_probs=100.0
Q ss_pred EEEEEecCCccccCC---CCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHH
Q 007226 37 LGEIYPLGGSADRLG---LVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHER 113 (612)
Q Consensus 37 ~avvlLaGGlGTRLG---~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~ 113 (612)
+..|+||||.||||+ ...||- ++|+ .|++++++.++.+... | + -.++|.|+. ...+.
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~--llpi-----~gkpli~~~l~~l~~~--------g--i-~~Iivv~~~--~~~~~ 63 (295)
T 1lvw_A 4 MKGIVLAGGSGTRLYPITRAVSKQ--LLPI-----YDKPMIYYPLSVLMLA--------G--I-RDILIISTP--RDLPL 63 (295)
T ss_dssp CEEEEECCCCCSTTTTTTTSSCGG--GSEE-----TTEETTHHHHHHHHHT--------T--C-CEEEEEECT--TTHHH
T ss_pred eEEEEECCCCCCccccccCCCCce--ecEE-----CCeeHHHHHHHHHHHC--------C--C-CeEEEEecc--chHHH
Confidence 467889999999999 567888 8887 6899999999887642 2 1 145666664 25567
Q ss_pred HHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCch-HhHHHHhcCchhHHHHCCcEEEEEEe
Q 007226 114 ITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGA-IWKLAHDKGIFKWFHDNGRKGATVRQ 192 (612)
Q Consensus 114 T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGd-I~~aL~~sGlLd~l~~~Gikyv~v~~ 192 (612)
..+++.+...+|+ ++.+..|+ .|.|-++ ++.++ +.+ . .-.++.+ .
T Consensus 64 i~~~l~~g~~~g~---~i~~~~~~----------------------~~~G~~~al~~a~------~~i-~-~~~~~lv-~ 109 (295)
T 1lvw_A 64 YRDLLGDGSQFGV---RFSYRVQE----------------------EPRGIADAFIVGK------DFI-G-DSKVALV-L 109 (295)
T ss_dssp HHHHHTTSGGGTS---EEEEEECS----------------------SCCCGGGHHHHTH------HHH-T-TSCEEEE-E
T ss_pred HHHHhhhccccCc---eEEEeeCC----------------------CCCChHHHHHHHH------HHh-C-CCcEEEE-E
Confidence 7788776444554 22211111 2455554 33322 222 1 2234444 4
Q ss_pred cCCCccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCCCCC
Q 007226 193 VSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNG 272 (612)
Q Consensus 193 vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~dg~ 272 (612)
.||++... .+-.++-.+...+.+..+. +.+-.. .++-|++.. ..+|+ ++.+.|-|.. +.
T Consensus 110 gD~~~~~~--~l~~~l~~~~~~~~~~~v~-~~~v~d-p~~~g~v~~--d~~g~------v~~~~ekp~~--------~~- 168 (295)
T 1lvw_A 110 GDNVFYGH--RFSEILRRAASLEDGAVIF-GYYVRD-PRPFGVVEF--DSEGR------VISIEEKPSR--------PK- 168 (295)
T ss_dssp TTCCEECT--THHHHHHHHHTCCSSEEEE-EEECSC-CTTSEEEEE--CTTSB------EEEEEESCSS--------CS-
T ss_pred CCccccCc--CHHHHHHHHHHcCCCcEEE-EEECCC-cccCCEEEE--CCCCc------EEEEEECCCC--------CC-
Confidence 99998653 3333444444444444433 233233 345777754 24565 3333332211 01
Q ss_pred ccccccceeeEEEEeHHHHHhh
Q 007226 273 LQADFPANTNILYVDLASAELV 294 (612)
Q Consensus 273 ~~s~f~~Ninnl~~~L~~l~~~ 294 (612)
+ ...|+...+|+-+.++.+
T Consensus 169 --s-~~~~~Giy~f~~~~l~~~ 187 (295)
T 1lvw_A 169 --S-NYVVPGLYFYDNQVVEIA 187 (295)
T ss_dssp --C-SEECCSEEEECTTHHHHH
T ss_pred --C-CEEEEEeEEEcHHHHHHH
Confidence 1 235888888888776543
No 23
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=97.01 E-value=0.006 Score=65.47 Aligned_cols=181 Identities=13% Similarity=0.073 Sum_probs=102.8
Q ss_pred EEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHHHH
Q 007226 38 GEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSL 117 (612)
Q Consensus 38 avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~~~ 117 (612)
-.|+||||.||||+-..||- ++|+ .|++++++.++++.+. | .-.++|.|+. ..+...++
T Consensus 13 ~~vIlAaG~g~R~~~~~pK~--l~~i-----~gkpli~~~l~~l~~~--------g---~~~iivv~~~---~~~~i~~~ 71 (468)
T 1hm9_A 13 FAIILAAGKGTRMKSDLPKV--LHKV-----AGISMLEHVFRSVGAI--------Q---PEKTVTVVGH---KAELVEEV 71 (468)
T ss_dssp EEEEECCCCCGGGCCSSCGG--GSEE-----TTEEHHHHHHHHHHTT--------C---CSEEEEEECT---THHHHHHS
T ss_pred cEEEEcCCCCccCCCCCCcE--eeEE-----CCccHHHHHHHHHHhc--------C---CCCEEEEECC---CHHHHHHH
Confidence 46789999999999777898 8887 6899999999887543 2 1256777776 44444443
Q ss_pred HHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCc-hHhHHHHhcCchhHHHHCCcEEEEEEecCCC
Q 007226 118 CERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHG-AIWKLAHDKGIFKWFHDNGRKGATVRQVSNV 196 (612)
Q Consensus 118 le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhG-dI~~aL~~sGlLd~l~~~Gikyv~v~~vDN~ 196 (612)
+++ .+.+ +. + . .+-|-+ .++.++ +.+. ..-+++.+.+.|.+
T Consensus 72 ~~~---------~i~~--------v~-~-------~------~~~G~~~sl~~a~------~~~~-~~~~~vlv~~~D~P 113 (468)
T 1hm9_A 72 LAG---------QTEF--------VT-Q-------S------EQLGTGHAVMMTE------PILE-GLSGHTLVIAGDTP 113 (468)
T ss_dssp SSS---------SSEE--------EE-C-------S------SCCCHHHHHHTTH------HHHT-TCCSEEEEEETTCT
T ss_pred hCC---------CcEE--------Ee-C-------C------ccCChHHHHHHHH------HHhc-cCCCeEEEEeCCcc
Confidence 322 1221 11 1 0 123333 233333 3332 22478999999999
Q ss_pred ccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCCCCCcccc
Q 007226 197 VAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNGLQAD 276 (612)
Q Consensus 197 la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~dg~~~s~ 276 (612)
+...+ .+-.++-.+...++++.+.+ .+.. ....-|.+.. ..+|+ ++++.+=++.. .. . ...
T Consensus 114 ~i~~~-~i~~l~~~~~~~~~~~~i~~-~~~~-~~~~~g~v~~--d~~g~------v~~~~ek~~~~-----~~-~--~~~ 174 (468)
T 1hm9_A 114 LITGE-SLKNLIDFHINHKNVATILT-AETD-NPFGYGRIVR--NDNAE------VLRIVEQKDAT-----DF-E--KQI 174 (468)
T ss_dssp TCCHH-HHHHHHHHHHHTTCSEEEEE-EECS-CCTTSCEEEE--CTTCC------EEEEECTTTCC-----TT-G--GGC
T ss_pred ccCHH-HHHHHHHHHHhcCCcEEEEE-eccC-CCCceeEEEE--CCCCC------EEEEEECCCCC-----hH-H--hcC
Confidence 87641 12233555555566665554 3322 2234566643 24555 44444432210 00 0 112
Q ss_pred ccceeeEEEEeHHHHHhhhc
Q 007226 277 FPANTNILYVDLASAELVGS 296 (612)
Q Consensus 277 f~~Ninnl~~~L~~l~~~l~ 296 (612)
+..|+...+|+-+.|.+.+.
T Consensus 175 ~~~~~Giy~f~~~~l~~~l~ 194 (468)
T 1hm9_A 175 KEINTGTYVFDNERLFEALK 194 (468)
T ss_dssp CEEEEEEEEEEHHHHHHHHT
T ss_pred eEEEEEEEEEEHHHHHHHHH
Confidence 33599999999998877664
No 24
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=96.91 E-value=0.022 Score=58.27 Aligned_cols=212 Identities=13% Similarity=0.024 Sum_probs=111.6
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++..|+||||.|||||- ||. ++|++ | .|++++++.++++.+. | .-.++|.|.. ...+...
T Consensus 5 ~~~~vIlAaG~g~R~~~--~K~--l~~ig--~-~g~pli~~~l~~~~~~--------~---~~~i~vv~~~--~~~~~~~ 64 (303)
T 3pnn_A 5 KPTLFVLAAGMGSRYGS--LKQ--LDGIG--P-GGDTIMDYSVYDAIRA--------G---FGRLVFVIRH--SFEKEFR 64 (303)
T ss_dssp CCEEEEECTTCBCTTSS--BCC--CCCCS--T-TSCCHHHHHHHHHHHH--------T---CCEEEEEECG--GGHHHHH
T ss_pred ceEEEEECCCCcccCCC--Cce--EeEcC--C-CCeeHHHHHHHHHHHC--------C---CCeEEEEcCc--hHHHHHH
Confidence 46788999999999995 788 88874 1 5899999999987654 2 2257788887 2357888
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEEEEEEecCC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSN 195 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN 195 (612)
++|.....++. ++.+..|+..- +. ........ ...|-|- .+..+.....+ + +.+.|.+.|+
T Consensus 65 ~~~~~~~~~~~---~i~~~~~~~~~-~~-~~~~~~~~-----~~~~~Gt--~~al~~a~~~i----~---~~~lV~~gD~ 125 (303)
T 3pnn_A 65 EKILTKYEGRI---PVELVFQELDR-LP-EGFSCPEG-----REKPWGT--NHAVLMGRDAI----R---EPFAVINADD 125 (303)
T ss_dssp HHTHHHHTTTS---CEEEEECCTTC-CC-TTCCCCTT-----CCSCCCH--HHHHHTTTTTC----C---SCEEEEESSC
T ss_pred HHHHHHhccCC---cEEEEeccccc-cc-cccccccc-----ccccCCc--HHHHHHHHHhc----C---CCEEEEECCe
Confidence 88886433332 46666666321 11 11111110 0134444 44444333333 1 3456777888
Q ss_pred CccccchhhHHHhhhhhh---cCCceeEEEEeecCCC-cc-c---ceEEEEEecCCCceecceEEEEecccCccCc-CCC
Q 007226 196 VVAATDLTLLALAGIGLH---HGKKLGFASCKRSSGA-TE-G---INVLIEKKNLDGKWAYGLSCIEYTEFDKFGI-TRG 266 (612)
Q Consensus 196 ~la~~Dp~i~~~~G~~~~---~~~~~~~~~v~rK~~~-~e-~---vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~-~~~ 266 (612)
+ ...| .+-.++.++.. .+.++.+.+ .+-..+ .. + -|++.. ..+|+ ...++|-.+.+.... ...
T Consensus 126 l-~~~~-~~~~l~~~~~~~~~~~~~~~v~~-~~~~~~~~~~g~~~~G~v~~--d~~g~---v~~i~Ekp~~~~~~~~~~~ 197 (303)
T 3pnn_A 126 F-YGRN-GFEVLARKLMTLEGKQGEYCMVG-YRVGNTLSESGGVSRGVCQV--DEKHL---LTGVVERTGIERTDGTISF 197 (303)
T ss_dssp B-CCHH-HHHHHHHHHHTTTTCSSEEEEEE-EEGGGSCBTTBCEEEEEEEE--CTTSB---EEEEEEEEEEEEETTEEEE
T ss_pred e-cCHH-HHHHHHHHHHHhccccCceEEEE-EECCCccCccCceeeeeEee--CCCCc---EEEEEECCCCccccccccc
Confidence 4 3332 23334555443 345565554 333233 22 1 266654 24666 344566554432110 000
Q ss_pred CCCCCCcc---ccccceeeEEEEeHHHHHhh
Q 007226 267 PFSSNGLQ---ADFPANTNILYVDLASAELV 294 (612)
Q Consensus 267 ~~~dg~~~---s~f~~Ninnl~~~L~~l~~~ 294 (612)
+..+|... .....|++..+|+-+.++.+
T Consensus 198 ~~~~g~~~~~~~~~~i~~GiY~f~~~~~~~l 228 (303)
T 3pnn_A 198 RDETGKICTLAEDAPVSMNMWGFTPDYFDYS 228 (303)
T ss_dssp ECTTSCEEEECTTCEEEEEEEEECTHHHHHH
T ss_pred cccccccccCCCCCEEEEEEEEECHHHHHHH
Confidence 00111100 01224999999998876543
No 25
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=96.90 E-value=0.0076 Score=58.76 Aligned_cols=129 Identities=15% Similarity=0.124 Sum_probs=75.4
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++..|+||||.||||+ +|- ++|+ .|++++++.++++++.. ..-.+++-|.. +.+.
T Consensus 3 ~~~aiIlA~G~s~R~~---~K~--l~~i-----~Gkpli~~~i~~~~~~~----------~~~~ivv~~~~-----~~i~ 57 (229)
T 1qwj_A 3 HLAALVLARGGSKGIP---LKN--IKRL-----AGVPLIGWVLRAALDAG----------VFQSVWVSTDH-----DEIE 57 (229)
T ss_dssp CEEEEEECCSCCSSSS---CTT--TSEE-----TTEEHHHHHHHHHHHHT----------CCSEEEEEESC-----HHHH
T ss_pred cEEEEEEcCCCCCCCC---Ccc--cceE-----CCEEHHHHHHHHHHhCC----------CcCEEEEECCh-----HHHH
Confidence 5778999999999996 487 8887 79999999999887653 11145665532 5567
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEEEEEEecCC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSN 195 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN 195 (612)
+++++ +|. .++.++.. + ..-.+.|.+.+..+|.. + .+.+++.+.+.|+
T Consensus 58 ~~~~~---~g~-----~~~~~~~~---------~-------~~~~~~~~~~v~~al~~------~--~~~d~vlv~~~D~ 105 (229)
T 1qwj_A 58 NVAKQ---FGA-----QVHRRSSE---------T-------SKDSSTSLDAIVEFLNY------H--NEVDIVGNIQATS 105 (229)
T ss_dssp HHHHH---TTC-----EEEECCGG---------G-------SSTTCCHHHHHHHHHTT------C--TTCSEEEEECTTC
T ss_pred HHHHH---cCC-----EEEeChhh---------h-------cCCCCcHHHHHHHHHHh------c--CCCCEEEEecCCC
Confidence 77764 232 12222100 0 00112223345555532 1 2457899999999
Q ss_pred CccccchhhHHHhhhhhhcCCceeEEE
Q 007226 196 VVAATDLTLLALAGIGLHHGKKLGFAS 222 (612)
Q Consensus 196 ~la~~Dp~i~~~~G~~~~~~~~~~~~~ 222 (612)
++...+ .+-.++..+...+.+..+.+
T Consensus 106 Pli~~~-~i~~l~~~~~~~~~~~~~~~ 131 (229)
T 1qwj_A 106 PCLHPT-DLQKVAEMIREEGYDSVFSV 131 (229)
T ss_dssp TTCCHH-HHHHHHHHHHSSCCSEEEEE
T ss_pred CcCCHH-HHHHHHHHHHhCCCCEEEEE
Confidence 998652 12123444444555544443
No 26
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=96.86 E-value=0.00062 Score=64.08 Aligned_cols=106 Identities=14% Similarity=0.161 Sum_probs=67.1
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++..|+||||.||||| .||. ++|+ .|+++++..++++.+.. .-.++|.|+. ..+...
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~--l~~~-----~g~pll~~~l~~l~~~~-----------~~~i~vv~~~---~~~~~~ 61 (197)
T 2wee_A 5 QITGVVLAAGRSNRLG--TPKQ--LLPY-----RDTTVLGATLDVARQAG-----------FDQLILTLGG---AASAVR 61 (197)
T ss_dssp EEEEEEEECCCCTTTS--SCGG--GSEE-----TTEEHHHHHHHHHHHTT-----------CSEEEEEECT---THHHHH
T ss_pred ceEEEEECCCCcccCC--CCeE--cCee-----CCccHHHHHHHHHHhcC-----------CCcEEEEeCC---CHHHHH
Confidence 5778999999999998 6888 8887 68999999998876542 1256777776 445554
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCC-CchHhHHHHhcCchhHHHHCCcEEEEEEecC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGG-HGAIWKLAHDKGIFKWFHDNGRKGATVRQVS 194 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~G-hGdI~~aL~~sGlLd~l~~~Gikyv~v~~vD 194 (612)
+++++ +|. . .+.+.+ . +-| .+.++.++..- ..+.+++.|...|
T Consensus 62 ~~~~~---~~~-----~--------~~~~~~--------~-----~~g~~~~i~~al~~~-------~~~~~~vlv~~~D 105 (197)
T 2wee_A 62 AAMAL---DGT-----D--------VVVVED--------V-----ERGCAASLRVALARV-------HPRATGIVLMLGD 105 (197)
T ss_dssp HHSCC---TTS-----E--------EEECC-----------------CCHHHHHHHHTTS-------CTTEEEEEEEETT
T ss_pred HHhcc---CCC-----E--------EEECCC--------c-----ccCHHHHHHHHHHHh-------cccCCeEEEEeCC
Confidence 44432 121 1 111110 0 113 24566666331 1256899999999
Q ss_pred CCcccc
Q 007226 195 NVVAAT 200 (612)
Q Consensus 195 N~la~~ 200 (612)
.++...
T Consensus 106 ~P~~~~ 111 (197)
T 2wee_A 106 QPQVAP 111 (197)
T ss_dssp CTTCCH
T ss_pred cCCCCH
Confidence 998764
No 27
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=96.84 E-value=0.027 Score=56.48 Aligned_cols=186 Identities=12% Similarity=0.121 Sum_probs=101.9
Q ss_pred EEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHH-HHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 37 LGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLI-RDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 37 ~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~-e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
..+|+||||.||||+ +|- ++|+ .||+++++.+ +++++. + + -.+++-|.+ +.+.
T Consensus 2 ~~aiIlA~G~stR~~---~K~--L~~i-----~GkPli~~~i~~~~~~~--------~--~-~~vvVvt~~-----~~i~ 55 (253)
T 4fcu_A 2 KHIVIPARFSSSRLP---GKP--LLLI-----HDRPMILRVVDQAKKVE--------G--F-DDLCVATDD-----ERIA 55 (253)
T ss_dssp EEEEEECCSCCTTST---TGG--GSEE-----TTEEHHHHHHHHHHTCT--------T--C-CEEEEEESC-----HHHH
T ss_pred eEEEEEeCCCCCCCC---CCc--eeeE-----CCeEhHHHHHHHHHHhc--------C--C-CEEEEECCH-----HHHH
Confidence 457899999999998 487 8777 7999999999 776432 2 1 145666643 6677
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEEEEEEecCC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSN 195 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN 195 (612)
+++++ ||. ++. +...+ .|.|-+.++.++. .+...+..++.+.+.|+
T Consensus 56 ~~~~~---~g~---~v~---------~~~~~-------------~~~Gt~~i~~a~~------~~~~~~~d~vlv~~gD~ 101 (253)
T 4fcu_A 56 EICRA---EGV---DVV---------LTSAD-------------HPSGTDRLSEVAR------IKGWDADDIIVNVQGDE 101 (253)
T ss_dssp HHHHT---TTC---CEE---------ECCTT-------------CCCHHHHHHHHHH------HHTCCTTCEEEECCTTC
T ss_pred HHHHH---cCC---eEE---------EeCCC-------------CCChHHHHHHHHH------hcCcCCCCEEEEEeCCc
Confidence 77764 343 111 11010 1234444555543 23223568999999999
Q ss_pred CccccchhhHHHhhhhhhc-CCceeEEEEee-----cCCCcccceEEEEEecCCCceecceEEEEecc--cCccCcCCCC
Q 007226 196 VVAATDLTLLALAGIGLHH-GKKLGFASCKR-----SSGATEGINVLIEKKNLDGKWAYGLSCIEYTE--FDKFGITRGP 267 (612)
Q Consensus 196 ~la~~Dp~i~~~~G~~~~~-~~~~~~~~v~r-----K~~~~e~vGvl~~~~~~dG~~~~~~~vVEYse--l~~~~~~~~~ 267 (612)
++...+ .+-.++..+... +..+...+++- -.+|. .+++++. .+|+ ++-+++ +|..- +..
T Consensus 102 Pli~~~-~i~~li~~~~~~~~~~~at~~~~~~~~~~~~~p~-~~kvv~d---~~g~------~l~fsr~~ip~~r--~~~ 168 (253)
T 4fcu_A 102 PLLPAQ-LVQQVAKLLVDKPNCSMSTLCEPIHALDEFQRDS-IVKVVMS---KQNE------ALYFSRATIPYDR--DGA 168 (253)
T ss_dssp TTCCHH-HHHHHHHHHHHCTTCSEEEEEEECCCHHHHHCTT-SCEEEEC---TTSB------EEEEESSCCSCCT--TTS
T ss_pred ccCCHH-HHHHHHHHHHhCCCCCEEEEeEEcCCHHHccCCC-ccEEEEC---CCCe------EEEecCCCCCCCC--Ccc
Confidence 998642 111234444343 23344333221 12232 2566653 6776 333344 33211 000
Q ss_pred CCCC-CccccccceeeEEEEeHHHHHhhh
Q 007226 268 FSSN-GLQADFPANTNILYVDLASAELVG 295 (612)
Q Consensus 268 ~~dg-~~~s~f~~Ninnl~~~L~~l~~~l 295 (612)
..+. .....|-.|+....|+-++|++..
T Consensus 169 ~~~~~~~~~~~~~~~GiY~f~~~~l~~~~ 197 (253)
T 4fcu_A 169 KRDEPTLHTQAFRHLGLYAYRVSLLQEYV 197 (253)
T ss_dssp SSSSCCCCSCCEEEEEEEEEEHHHHHHHT
T ss_pred cccccccccceeEEEEEEEeCHHHHHHHH
Confidence 0000 000134349999999999999876
No 28
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=96.83 E-value=0.00092 Score=65.89 Aligned_cols=191 Identities=14% Similarity=0.091 Sum_probs=99.7
Q ss_pred EEEEEecCCccccCCC---CCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHH
Q 007226 37 LGEIYPLGGSADRLGL---VDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHER 113 (612)
Q Consensus 37 ~avvlLaGGlGTRLG~---~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~ 113 (612)
+..|+||||.||||+- +.||- ++|+ .|++++++.++++.+. | .-.++|.|+. .++.
T Consensus 3 ~~avIlAaG~gtRl~~lt~~~pK~--l~~i-----~gkpli~~~l~~l~~~--------g---~~~i~vv~~~---~~~~ 61 (259)
T 1tzf_A 3 SKAVILAGGLGTRLSEETIVKPKP--MVEI-----GGKPILWHIMKMYSVH--------G---IKDFIICCGY---KGYV 61 (259)
T ss_dssp CEEEEEECSCC--------CCCGG--GCEE-----TTEEHHHHHHHHHHHT--------T---CCEEEEEECT---THHH
T ss_pred cEEEEECCCCcccCCCccCCCCcc--ccEE-----CCEEHHHHHHHHHHHC--------C---CCEEEEEccc---CHHH
Confidence 4578899999999985 56888 8887 6999999998887653 2 1257888987 5678
Q ss_pred HHHHHHHcccCCCCCCceEEEEecccceEec---CCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEEEEE
Q 007226 114 ITSLCERLRWFGRGQSSFQLFEQPLVPAVDA---EDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATV 190 (612)
Q Consensus 114 T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~---~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gikyv~v 190 (612)
+.+++.++..++ .++.+..|+.--.+.. ++..+...+ .-.+-|.|+...+.. +.+. +-+++.+
T Consensus 62 i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~~~~~gt~~al~~a~-----~~~~--~~~~~lv 127 (259)
T 1tzf_A 62 IKEYFANYFLHM---SDVTFHMAENRMEVHHKRVEPWNVTLVD----TGDSSMTGGRLKRVA-----EYVK--DDEAFLF 127 (259)
T ss_dssp HHHHHHTHHHHH---SCEEEEGGGTEEEETTCCCCCCEEEEEE----CCSSCCHHHHHHHTG-----GGTT--TSSCEEE
T ss_pred HHHHHhhccccc---ccccccccccceeeeeccccccceeeee----cccccCcHHHHHHHH-----HhcC--CCCcEEE
Confidence 889998643111 1233333332000100 000010000 012455554332221 2221 2367888
Q ss_pred EecCCCccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCCC
Q 007226 191 RQVSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSS 270 (612)
Q Consensus 191 ~~vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~d 270 (612)
.+.|++. .. .+-.++..+...+..+.+.. ++ +...-|++.. .+|+ ++++.|-|..
T Consensus 128 ~~~D~~~-~~--~~~~~~~~~~~~~~~~t~~~-~~---~~~~~g~v~~---~~g~------v~~~~ekp~~--------- 182 (259)
T 1tzf_A 128 TYGDGVA-DL--DIKATIDFHKAHGKKATLTA-TF---PPGRFGALDI---QAGQ------VRSFQEKPKG--------- 182 (259)
T ss_dssp EETTEEE-CC--CHHHHHHHHHHHCCSEEEEE-EC---CCCCSEEEEE---ETTE------EEEEEESCSC---------
T ss_pred EECCEec-cc--CHHHHHHHHHHhCCeEEEEE-ec---CCCCccEEEE---cCCE------EEEEEecCCC---------
Confidence 8999842 22 23344556555566554432 22 2234676654 2565 4444442211
Q ss_pred CCccccccceeeEEEEeHHHH
Q 007226 271 NGLQADFPANTNILYVDLASA 291 (612)
Q Consensus 271 g~~~s~f~~Ninnl~~~L~~l 291 (612)
..+..|+...+|+-+.+
T Consensus 183 ----~~~~~~~Giy~~~~~~l 199 (259)
T 1tzf_A 183 ----DGAMINGGFFVLNPSVI 199 (259)
T ss_dssp ----CSCCEECCCEEECGGGG
T ss_pred ----CCceEEEEEEEeCHHHH
Confidence 02335888888888766
No 29
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=96.83 E-value=0.00055 Score=64.40 Aligned_cols=106 Identities=14% Similarity=0.104 Sum_probs=69.4
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++..|+||||.||||| .||. ++|+ .|++++++.++++... + .-.++|.|+. .++...
T Consensus 5 ~~~~iIlA~G~~~R~g--~~K~--l~~~-----~g~pli~~~l~~l~~~--------~---~~~i~vv~~~---~~~~~~ 61 (199)
T 2waw_A 5 RVTGVVLAAGYSRRLG--TPKQ--LLPL-----GDTTLLGATLAMARRC--------P---FDQLIVTLGG---AADEVL 61 (199)
T ss_dssp CEEEEEEESSCCTTTT--SCGG--GCEE-----TTEEHHHHHHHHHHTS--------S---CSEEEEEECT---THHHHH
T ss_pred ceEEEEECCCCCCCCC--CCEE--eCEe-----CccCHHHHHHHHHHhC--------C---CCcEEEEeCC---CHHHHH
Confidence 5788999999999999 6888 8887 6899999998877543 1 1257777776 445555
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCC-CchHhHHHHhcCchhHHHHCCcEEEEEEecC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGG-HGAIWKLAHDKGIFKWFHDNGRKGATVRQVS 194 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~G-hGdI~~aL~~sGlLd~l~~~Gikyv~v~~vD 194 (612)
+++++ +|. . .+.+. + .+.| .+.++.+|... ..+.+++.|...|
T Consensus 62 ~~~~~---~~~-----~--------~~~~~-~------------~~~g~~~~i~~al~~~-------~~~~~~vlv~~~D 105 (199)
T 2waw_A 62 EKVEL---DGL-----D--------IVLVD-D------------AGLGCSSSLKSALTWV-------DPTAEGIVLMLGD 105 (199)
T ss_dssp HHSCC---TTS-----E--------EEECC-C------------CCTTCCCHHHHHHHTS-------CTTCSEEEEEETT
T ss_pred HHhcc---CCC-----E--------EEECC-C------------cccCHHHHHHHHHHhh-------hccCCeEEEEeCC
Confidence 44432 221 1 11111 0 1123 35677777542 1256899999999
Q ss_pred CCcccc
Q 007226 195 NVVAAT 200 (612)
Q Consensus 195 N~la~~ 200 (612)
.++...
T Consensus 106 ~P~~~~ 111 (199)
T 2waw_A 106 QPGITA 111 (199)
T ss_dssp CTTCCH
T ss_pred cccCCH
Confidence 998764
No 30
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=96.77 E-value=0.0012 Score=63.52 Aligned_cols=54 Identities=24% Similarity=0.330 Sum_probs=42.6
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCC
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSS 106 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~ 106 (612)
++.+|+||||.|||||...||. ++|+ .|++++++.++++.+.. ..-.++|-|+.
T Consensus 2 ~~~~vIlA~G~g~R~~~~~~K~--l~~~-----~g~pli~~~l~~l~~~~----------~~~~i~vv~~~ 55 (223)
T 2xwl_A 2 ATVAVVPAAGSGERLRAGRPKA--FVTL-----GGTPLLEHALSGLRASG----------VIDRIVIAVPP 55 (223)
T ss_dssp CEEEEEECCCCCGGGTSSSCGG--GSEE-----TTEEHHHHHHHHHHHHS----------CCSEEEEEECG
T ss_pred ceEEEEECCccCcccCCCCCCe--eeEE-----CCeEHHHHHHHHHhcCC----------CCCeEEEEEcc
Confidence 4678999999999999767998 8887 68999999999887652 01256777776
No 31
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=96.76 E-value=0.0013 Score=65.27 Aligned_cols=64 Identities=20% Similarity=0.331 Sum_probs=48.1
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
+++.|+||||.|||||.+.||- ++++ .|++++++.++.+++.. ..-.++|.|+. +..+...
T Consensus 7 ~~~aIIlAaG~g~Rmg~~~~K~--l~~l-----~Gkpll~~~l~~~~~~~----------~~~~ivVv~~~--~~~~~~~ 67 (231)
T 3q80_A 7 EVVAIVPAAGSGERLAVGVPKA--FYQL-----DGQTLIERAVDGLLDSG----------VVDTVVVAVPA--DRTDEAR 67 (231)
T ss_dssp CEEEEEECCCCCTTTCSSSCGG--GCEE-----TTEEHHHHHHHHHHHTS----------CCCEEEEEECG--GGHHHHH
T ss_pred ceEEEEECCCCCccCCCCCCce--EEEE-----CCeEHHHHHHHHHHhCC----------CCCeEEEECCh--HHHHHHH
Confidence 6889999999999999888998 8887 79999999999876542 01256777776 2334444
Q ss_pred HHH
Q 007226 116 SLC 118 (612)
Q Consensus 116 ~~l 118 (612)
+++
T Consensus 68 ~~~ 70 (231)
T 3q80_A 68 QIL 70 (231)
T ss_dssp HHH
T ss_pred HHh
Confidence 444
No 32
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=96.71 E-value=0.00087 Score=64.92 Aligned_cols=64 Identities=14% Similarity=0.216 Sum_probs=38.4
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++..|+||||.|||||.+.||. ++|+ .|++++++.++++.+.. + .-.++|-|+. .++...
T Consensus 6 ~~~aiIlA~G~g~R~~~~~~K~--l~~~-----~gkpli~~~l~~l~~~~-------~---~~~ivvv~~~---~~~~~~ 65 (231)
T 1vgw_A 6 KNIALIPAAGIGVRFGADKPKQ--YVEI-----GSKTVLEHVLGIFERHE-------A---VDLTVVVVSP---EDTFAD 65 (231)
T ss_dssp CEEEEEECC----------CCS--CCEE-----TTEEHHHHHHHHHHTCT-------T---CCEEEEECCT---TCSTHH
T ss_pred ceEEEEEcccccccCCCCCCce--EeEE-----CCeEHHHHHHHHHHcCC-------C---CCeEEEEECc---cHHHHH
Confidence 5788999999999999766898 8887 69999999998876531 1 1257778876 334455
Q ss_pred HHHHH
Q 007226 116 SLCER 120 (612)
Q Consensus 116 ~~le~ 120 (612)
+ +.+
T Consensus 66 ~-~~~ 69 (231)
T 1vgw_A 66 K-VQT 69 (231)
T ss_dssp H-HHH
T ss_pred H-HHh
Confidence 5 544
No 33
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=96.68 E-value=0.0023 Score=62.12 Aligned_cols=127 Identities=10% Similarity=0.046 Sum_probs=74.3
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++.+|+||||.||||| ||. ++|+ .|++++++.++++.+.. ..-.++|-|.. +.+.
T Consensus 4 ~~~aiIlA~G~g~R~~---~K~--l~~i-----~gkpll~~~l~~~~~~~----------~~~~ivvv~~~-----~~i~ 58 (228)
T 1ezi_A 4 QNIAVILARQNSKGLP---LKN--LRKM-----NGISLLGHTINAAISSK----------CFDRIIVSTDG-----GLIA 58 (228)
T ss_dssp EEEEEEECCSSCSSST---TTT--TCEE-----TTEEHHHHHHHHHHHHC----------CCSEEEEEESC-----HHHH
T ss_pred ceEEEEecCCCCCCCC---Ccc--ccee-----CCcCHHHHHHHHHHhCC----------CCCEEEEECCC-----HHHH
Confidence 5778999999999999 898 8887 69999999999887642 01256666653 4456
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCc---hHhHHHHhcCchhHHHHCCcEEEEEEe
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHG---AIWKLAHDKGIFKWFHDNGRKGATVRQ 192 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhG---dI~~aL~~sGlLd~l~~~Gikyv~v~~ 192 (612)
++++++ |. ++ +.++ .. +.++|-| .++.+|. .+ ..+.+++.+.+
T Consensus 59 ~~~~~~---~~---~~--~~~~-----------------~~--~~~~~~g~~~sv~~~l~------~~-~~~~d~vlv~~ 104 (228)
T 1ezi_A 59 EEAKNF---GV---EV--VLRP-----------------AE--LASDTASSISGVIHALE------TI-GSNSGTVTLLQ 104 (228)
T ss_dssp HHHHHT---TC---EE--EECC-----------------C--------CHHHHHHHHHHH------HH-TCCSEEEEECC
T ss_pred HHHHHc---CC---EE--EeCc-----------------hH--HcCCCCChHHHHHHHHH------Hh-CCCCCEEEEEc
Confidence 666642 32 11 2110 00 1112222 3444443 23 23468999999
Q ss_pred cCCCccccchhhHHHhhhhhhcCCceeEEE
Q 007226 193 VSNVVAATDLTLLALAGIGLHHGKKLGFAS 222 (612)
Q Consensus 193 vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~ 222 (612)
.|+++...+ .+-.++......+.+..+.+
T Consensus 105 ~D~P~~~~~-~i~~l~~~~~~~~~~~~~~~ 133 (228)
T 1ezi_A 105 PTSPLRTGA-HIREAFSLFDEKIKGSVVSA 133 (228)
T ss_dssp TTCTTCCHH-HHHHHHTTCCTTTCCCEEEE
T ss_pred CCCCcCCHH-HHHHHHHHHHhcCCCEEEEE
Confidence 999987642 12122333333444555554
No 34
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=96.60 E-value=0.0014 Score=64.85 Aligned_cols=113 Identities=8% Similarity=0.090 Sum_probs=66.3
Q ss_pred cEEEEEecCCccccCCC-CCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHH
Q 007226 36 ELGEIYPLGGSADRLGL-VDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERI 114 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~-~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T 114 (612)
++..|+||||.|||||. +.||- ++|+ .|++++++.++.+.+.. ..-.++|-|+. +-.+..
T Consensus 3 ~~~aIIlAaG~g~Rm~~~~~pK~--l~~l-----~Gkpll~~~l~~~~~~~----------~~~~ivvv~~~--~~~~~~ 63 (246)
T 3f1c_A 3 LIYAQILAGGKGTRMGNVSMPKQ--FLPL-----NGKPIIVHTVEKFILNT----------RFDKILISSPK--EWMNHA 63 (246)
T ss_dssp CEEEEEECC-----C-CSSCCGG--GSEE-----TTEEHHHHHHHHHHTCT----------TCSEEEEEECG--GGHHHH
T ss_pred ccEEEEECCccccccCCCCCCCe--EEEE-----CCeeHHHHHHHHHHcCC----------CCCEEEEEeCH--HHHHHH
Confidence 56889999999999998 77998 8887 79999999988875532 12256777776 233346
Q ss_pred HHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHH----CCcEEEEE
Q 007226 115 TSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHD----NGRKGATV 190 (612)
Q Consensus 115 ~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~----~Gikyv~v 190 (612)
.+.++++.. + ..+. +.++ ..+. .+.++.+| +.+.+ .+-+++.|
T Consensus 64 ~~~~~~~~~---~-~~~~-~~~~-------~~~~---------------~~sv~~al------~~l~~~~~~~~~~~vlv 110 (246)
T 3f1c_A 64 EDNIKKYIS---D-DRIV-VIEG-------GEDR---------------NETIMNGI------RFVEKTYGLTDDDIIVT 110 (246)
T ss_dssp HHHHHHHCC---C-TTEE-EEEC-------CSSH---------------HHHHHHHH------HHHHHHTCCCTTCEEEE
T ss_pred HHHHHHhCC---C-CCEE-EECC-------CCch---------------HHHHHHHH------HHHhhhhcCCCCCEEEE
Confidence 666766431 1 1121 1110 0000 13455555 33433 24689999
Q ss_pred EecCCCcccc
Q 007226 191 RQVSNVVAAT 200 (612)
Q Consensus 191 ~~vDN~la~~ 200 (612)
.+.|.++...
T Consensus 111 ~~~d~Pli~~ 120 (246)
T 3f1c_A 111 HDAVRPFLTH 120 (246)
T ss_dssp EETTCTTCCH
T ss_pred ecCcccCCCH
Confidence 9999999875
No 35
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=96.50 E-value=0.0026 Score=65.24 Aligned_cols=180 Identities=17% Similarity=0.146 Sum_probs=101.2
Q ss_pred EEEEEecCCccccCC---CCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHH
Q 007226 37 LGEIYPLGGSADRLG---LVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHER 113 (612)
Q Consensus 37 ~avvlLaGGlGTRLG---~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~ 113 (612)
+..|+||||.||||+ ...||- ++|+ .|++++++.++.+... | + -.++|.|+. ...+.
T Consensus 4 m~aIILAgG~GtRl~plT~~~pK~--llpi-----~gkpli~~~l~~l~~~--------g--i-~~I~vv~~~--~~~~~ 63 (296)
T 1mc3_A 4 MKGIILAGGSGTRLHPITRGVSKQ--LLPI-----YDKPMIYYPLSVLMLA--------G--I-REILIITTP--EDKGY 63 (296)
T ss_dssp CEEEEECCCCCGGGHHHHTTSCGG--GSEE-----TTEETTHHHHHHHHHT--------T--C-CEEEEEECT--TTHHH
T ss_pred cEEEEECCCCCCcCCcccCCCCce--eeEE-----CCeeHHHHHHHHHHhC--------C--C-CcEEEEech--hHHHH
Confidence 457889999999998 678898 8887 6899999999887542 2 1 145666664 25677
Q ss_pred HHHHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCch-HhHHHHhcCchhHHHHCCcEEEEEEe
Q 007226 114 ITSLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGA-IWKLAHDKGIFKWFHDNGRKGATVRQ 192 (612)
Q Consensus 114 T~~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGd-I~~aL~~sGlLd~l~~~Gikyv~v~~ 192 (612)
..+++.+...||+ ++.+..|+ .|.|-++ ++.++ +.+ . +-.++ +..
T Consensus 64 i~~~l~~g~~~g~---~i~~~~~~----------------------~~~G~~~al~~a~------~~i-~-~~~~~-lv~ 109 (296)
T 1mc3_A 64 FQRLLGDGSEFGI---QLEYAEQP----------------------SPDGLAQAFIIGE------TFL-N-GEPSC-LVL 109 (296)
T ss_dssp HHHHHTTSGGGTC---EEEEEECS----------------------SCCCSTHHHHHTH------HHH-T-TSCEE-EEE
T ss_pred HHHHHhcccccCc---eEEEeccC----------------------CCCCHHHHHHHHH------HHh-C-CCCEE-EEE
Confidence 7788876444554 22221111 2455553 33333 222 1 12344 444
Q ss_pred cCCCccccchhhHHHhhhhhhcCCceeEEEEeecCCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCCCCC
Q 007226 193 VSNVVAATDLTLLALAGIGLHHGKKLGFASCKRSSGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNG 272 (612)
Q Consensus 193 vDN~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~dg~ 272 (612)
.||++... .+-.++-.+...+.+..+. +.+... .++-|++.. ..+|+ ++.+.|-|.. ..
T Consensus 110 gD~~~~~~--~l~~~l~~~~~~~~~~~v~-~~~v~d-p~~yg~v~~--d~~g~------v~~~~ekp~~--------~~- 168 (296)
T 1mc3_A 110 GDNIFFGQ--GFSPKLRHVAARTEGATVF-GYQVMD-PERFGVVEF--DDNFR------AISLEEKPKQ--------PK- 168 (296)
T ss_dssp TTEEEECS--SCHHHHHHHTTCCSSEEEE-EEECSC-CSSSBBCEE--ETTEE------EEECCBSCSS--------CS-
T ss_pred CCcccccc--CHHHHHHHHHHcCCCCEEE-EEECCC-cccCCEEEE--CCCCc------EEEEEECCCC--------CC-
Confidence 89988653 2323344443344444443 233233 345677643 14554 4444443211 01
Q ss_pred ccccccceeeEEEEeHHHHHhh
Q 007226 273 LQADFPANTNILYVDLASAELV 294 (612)
Q Consensus 273 ~~s~f~~Ninnl~~~L~~l~~~ 294 (612)
+ ...|+...+|+-+.++.+
T Consensus 169 --s-~~~~~Giy~~~~~~l~~~ 187 (296)
T 1mc3_A 169 --S-NWAVTGLYFYDSKVVEYA 187 (296)
T ss_dssp --C-SEEEEEEEECCTHHHHHH
T ss_pred --C-CEEEEEEEEEcHHHHHHH
Confidence 1 235899999998876543
No 36
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=96.50 E-value=0.0013 Score=62.34 Aligned_cols=61 Identities=21% Similarity=0.383 Sum_probs=45.1
Q ss_pred EEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHHHH
Q 007226 38 GEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERITSL 117 (612)
Q Consensus 38 avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~~~ 117 (612)
..|+||||.|||||- .||. ++|+ .|++++++.++++++. + --.++|.|+. .++.+.++
T Consensus 2 ~aiIlA~G~s~R~~~-~~K~--l~~~-----~g~pli~~~l~~l~~~--------~---~~~v~vv~~~---~~~~i~~~ 59 (196)
T 3rsb_A 2 DALIMAGGKGTRMGG-VEKP--LIKL-----CGRCLIDYVVSPLLKS--------K---VNNIFIATSP---NTPKTKEY 59 (196)
T ss_dssp EEEEEC----CGGGG-SCGG--GCEE-----TTEEHHHHHHHHHHSS--------S---CCCEEEECCT---TCHHHHHH
T ss_pred EEEEECCCCCCcCCC-CCcc--EEEE-----CCEEHHHHHHHHHHHC--------C---CCEEEEEeCC---ChHHHHHH
Confidence 468899999999986 6888 8887 7999999999887543 1 1267888887 57888899
Q ss_pred HHH
Q 007226 118 CER 120 (612)
Q Consensus 118 le~ 120 (612)
+++
T Consensus 60 ~~~ 62 (196)
T 3rsb_A 60 INS 62 (196)
T ss_dssp HHH
T ss_pred HHh
Confidence 887
No 37
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=96.46 E-value=0.0012 Score=63.78 Aligned_cols=54 Identities=11% Similarity=0.225 Sum_probs=36.6
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCC
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSS 106 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~ 106 (612)
++..|+||||.|||||.+.||. ++|+ .|++++++.++++.+.. + .-.++|.|+.
T Consensus 4 ~~~aiIlAaG~g~R~~~~~~K~--l~~i-----~g~pli~~~l~~l~~~~-------~---~~~ivvv~~~ 57 (228)
T 2yc3_A 4 SVSVILLAGGQGKRMKMSMPKQ--YIPL-----LGQPIALYSFFTFSRMP-------E---VKEIVVVCDP 57 (228)
T ss_dssp CEEEEEECCCCC-------CGG--GSEE-----TTEEHHHHHHHHHHHCT-------T---EEEEEEECCG
T ss_pred ceEEEEECCccccccCCCCCcc--EeEE-----CCEEHHHHHHHHHHcCC-------C---CCeEEEEECh
Confidence 5788999999999999777998 8887 79999999998876541 1 1256777776
No 38
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=96.41 E-value=0.0014 Score=63.89 Aligned_cols=54 Identities=22% Similarity=0.281 Sum_probs=42.6
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCC
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSS 106 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~ 106 (612)
++..|+||||.|||||.+.||. ++|+ .|++++++.++++.+.. ..-.++|-|+.
T Consensus 7 ~~~~iIlA~G~g~R~~~~~~K~--l~~i-----~g~pll~~~i~~l~~~~----------~~~~ivvv~~~ 60 (236)
T 1i52_A 7 DVCAVVPAAGFGRRMQTECPKQ--YLSI-----GNQTILEHSVHALLAHP----------RVKRVVIAISP 60 (236)
T ss_dssp CEEEEEEECCCCGGGCCSSCGG--GSEE-----TTEEHHHHHHHHHHTST----------TEEEEEEEECT
T ss_pred ceeEEEECCcCccccCCCCCcc--eeeE-----CCEEHHHHHHHHHHhCC----------CCCeEEEEeCc
Confidence 5788999999999999767998 8887 69999999998876532 12256777775
No 39
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=96.38 E-value=0.0017 Score=63.12 Aligned_cols=54 Identities=24% Similarity=0.222 Sum_probs=42.5
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCC
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSS 106 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~ 106 (612)
.+..|+||||.|||||.+.||. ++|+ .|++++++.++++++.. ..-.++|-|..
T Consensus 13 ~~~aiILAaG~s~Rm~~~~~K~--l~~i-----~Gkpli~~~i~~l~~~~----------~~~~ivVv~~~ 66 (234)
T 1vpa_A 13 MNVAILLAAGKGERMSENVPKQ--FLEI-----EGRMLFEYPLSTFLKSE----------AIDGVVIVTRR 66 (234)
T ss_dssp CEEEEEEECCCCGGGCCSSCGG--GCEE-----TTEETTHHHHHHHHHCT----------TCSEEEEEECG
T ss_pred cCeEEEEcCcchhhcCCCCCce--EEEE-----CCeEHHHHHHHHHHcCC----------CCCeEEEEECh
Confidence 4788999999999999767998 8887 79999999998876532 01257777765
No 40
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=96.34 E-value=0.0033 Score=61.41 Aligned_cols=181 Identities=10% Similarity=0.056 Sum_probs=101.3
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++..|+||||.||||| ||. ++|+ .|++++++.++++.+. | ..-.++|.|+. +.+.
T Consensus 2 ~~~aiIlA~G~~~R~~---~K~--l~~i-----~g~pli~~~i~~~~~~--------~--~~~~ivvv~~~-----~~i~ 56 (245)
T 1h7e_A 2 KAVIVIPARYGSSRLP---GKP--LLDI-----VGKPMIQHVYERALQV--------A--GVAEVWVATDD-----PRVE 56 (245)
T ss_dssp CEEEEEECCSCCSSST---TGG--GCEE-----TTEEHHHHHHHHHHTC--------T--TCCEEEEEESC-----HHHH
T ss_pred CeEEEEEcCCcCCCCC---CCc--cccc-----CCchHHHHHHHHHHhC--------C--CCCeEEEECCc-----HHHH
Confidence 4678999999999997 998 8887 6999999998887553 2 11256777753 5677
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEEEEEEecCC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSN 195 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN 195 (612)
++++++ |. . .+... ...+.|-++++.++.. + +-+++.+.+.|.
T Consensus 57 ~~~~~~---~~-----~--------~~~~~------------~~~~~g~~~~~~~~~~------~---~~~~~lv~~~D~ 99 (245)
T 1h7e_A 57 QAVQAF---GG-----K--------AIMTR------------NDHESGTDRLVEVMHK------V---EADIYINLQGDE 99 (245)
T ss_dssp HHHHHT---TC-----E--------EEECC------------SCCSSHHHHHHHHHHH------S---CCSEEEECCTTC
T ss_pred HHHHHc---CC-----e--------EEeCC------------CccCCcHHHHHHHHHh------C---CCCEEEEEcCCc
Confidence 777653 21 1 11110 0123444556655542 1 357899999999
Q ss_pred CccccchhhHHHhhhhhhc-CCceeEEEEeecC----CCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCCC
Q 007226 196 VVAATDLTLLALAGIGLHH-GKKLGFASCKRSS----GATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSS 270 (612)
Q Consensus 196 ~la~~Dp~i~~~~G~~~~~-~~~~~~~~v~rK~----~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~d 270 (612)
++...+ .+-.++..+... +.++.+.+++..+ .+ ..+.++.. .+|+ + +.+++-+... . +.
T Consensus 100 P~~~~~-~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~g~----~--~~~~~~~~~~-~--r~-- 163 (245)
T 1h7e_A 100 PMIRPR-DVETLLQGMRDDPALPVATLCHAISAAEAAEP-STVKVVVN---TRQD----A--LYFSRSPIPY-P--RN-- 163 (245)
T ss_dssp TTCCHH-HHHHHHHHHHHCTTCCEEEEEEEECHHHHTCT-TSCEEEEC---TTCB----E--EEEESSCSSC-C--TT--
T ss_pred CcCCHH-HHHHHHHHHHhCCCCCEEEEeecCCHHHhcCC-CCcEEEEC---CCCc----E--EEeecCCCCC-C--cc--
Confidence 987642 122334444444 5566555433210 11 12344432 5665 3 3333311000 0 00
Q ss_pred CCccccccceeeEEEEeHHHHHhhh
Q 007226 271 NGLQADFPANTNILYVDLASAELVG 295 (612)
Q Consensus 271 g~~~s~f~~Ninnl~~~L~~l~~~l 295 (612)
.. ...+..|+....|+.+.+.+.+
T Consensus 164 ~~-~~~~~~~~g~y~~~~~~l~~~~ 187 (245)
T 1h7e_A 164 AE-KARYLKHVGIYAYRRDVLQNYS 187 (245)
T ss_dssp GG-GCCEEEEEEEEEEEHHHHHHGG
T ss_pred cc-cCceeEEEEEEEcCHHHHHHHH
Confidence 00 0112249999999999887765
No 41
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=96.29 E-value=0.0017 Score=62.10 Aligned_cols=48 Identities=17% Similarity=0.183 Sum_probs=38.0
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCC
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSS 106 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~ 106 (612)
++..|+||||.|||||. ||. ++|+ .|+++++..++++.. . .++|.|+.
T Consensus 2 ~~~~iIlAgG~g~Rmg~--~K~--l~~i-----~g~pll~~~l~~l~~------------~--~ivvv~~~ 49 (197)
T 3d5n_A 2 NIGVIILAAGEGKRFGG--DKL--LAKI-----DNTPIIMRTIRIYGD------------L--EKIIIVGK 49 (197)
T ss_dssp CEEEEEECSCCTTCCCS--SGG--GSBS-----SSSBHHHHHHHHTTT------------S--BCCEEECT
T ss_pred ceEEEEECCcCcccCCC--Cee--eCEe-----CceEHHHHHHHHHHh------------C--CEEEEECC
Confidence 36789999999999994 898 8877 799999998876532 1 56777776
No 42
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=96.27 E-value=0.0025 Score=61.68 Aligned_cols=65 Identities=15% Similarity=0.202 Sum_probs=39.4
Q ss_pred EEEEEecCCccccCCC-CCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 37 LGEIYPLGGSADRLGL-VDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 37 ~avvlLaGGlGTRLG~-~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
+..|+||||.|||||- +.||. ++|+ .|++++++.++++.+.. + .-.++|.|+. ...+...
T Consensus 3 ~~~iIlA~G~g~R~~~~~~~K~--l~~i-----~g~pli~~~l~~l~~~~-------~---~~~i~vv~~~--~~~~~~~ 63 (236)
T 2vsh_A 3 IYAGILAGGTGTRMGISNLPKQ--FLEL-----GDRPILIHTIEKFVLEP-------S---IEKIVVGVHG--DWVSHAE 63 (236)
T ss_dssp EEEEEEEC-----------CGG--GSEE-----TTEEHHHHHHHHHHTCT-------T---CCCEEEEECG--GGHHHHH
T ss_pred eEEEEeCCccccccCCCCCCCe--eeee-----CCccHHHHHHHHHHcCC-------C---CCeEEEEeCH--HHHHHHH
Confidence 5678999999999995 56888 8877 69999999988876531 1 1257788876 2336677
Q ss_pred HHHHH
Q 007226 116 SLCER 120 (612)
Q Consensus 116 ~~le~ 120 (612)
+++++
T Consensus 64 ~~~~~ 68 (236)
T 2vsh_A 64 DLVDK 68 (236)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77765
No 43
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=96.22 E-value=0.0027 Score=61.03 Aligned_cols=51 Identities=20% Similarity=0.307 Sum_probs=40.6
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCC
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSS 106 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~ 106 (612)
++..|+||||.|+||| ..||. ++|+ .|+++++..++++... . -.++|.|+.
T Consensus 6 ~~~~iILAgG~s~Rmg-~~~K~--ll~i-----~G~pli~~~l~~l~~~-------~-----~~ivvv~~~ 56 (201)
T 1e5k_A 6 TITGVVLAGGKARRMG-GVDKG--LLEL-----NGKPLWQHVADALMTQ-------L-----SHVVVNANR 56 (201)
T ss_dssp SEEEEEECCCCCSSSC-SSCGG--GSEE-----TTEEHHHHHHHHHHHH-------C-----SCEEEECSS
T ss_pred cceEEEEcCCCCCcCC-CCCCc--eeeE-----CceeHHHHHHHHHHhh-------C-----CEEEEEcCC
Confidence 5788999999999999 56888 8887 6999999999887632 1 156777776
No 44
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=96.17 E-value=0.0029 Score=63.08 Aligned_cols=63 Identities=21% Similarity=0.225 Sum_probs=46.2
Q ss_pred cEEEEEecCCccccCC---CCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchH
Q 007226 36 ELGEIYPLGGSADRLG---LVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHE 112 (612)
Q Consensus 36 k~avvlLaGGlGTRLG---~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~ 112 (612)
++..|+||||.||||+ ...||. ++|+ .|+++++..++++.+. | + -.++|.|.. ..+
T Consensus 25 ~~~aiIlAaG~gtRl~plt~~~pK~--l~~i-----~gkpli~~~l~~l~~~--------g--~-~~i~vv~~~---~~~ 83 (254)
T 1jyk_A 25 RVKAIILAAGLGTRLRPLTENTPKA--LVQV-----NQKPLIEYQIEFLKEK--------G--I-NDIIIIVGY---LKE 83 (254)
T ss_dssp CCEEEEEECSCCGGGTTTTSSSCGG--GCEE-----TTEEHHHHHHHHHHHT--------T--C-CCEEEEECT---TGG
T ss_pred CceEEEECCCCcccCCcccCCCCCE--EeeE-----CCEEHHHHHHHHHHHC--------C--C-CeEEEEeCC---cHH
Confidence 5778899999999998 567898 8887 6899999999887654 2 1 146777776 344
Q ss_pred HHHHHHH
Q 007226 113 RITSLCE 119 (612)
Q Consensus 113 ~T~~~le 119 (612)
...++++
T Consensus 84 ~i~~~~~ 90 (254)
T 1jyk_A 84 QFDYLKE 90 (254)
T ss_dssp GGTHHHH
T ss_pred HHHHHHH
Confidence 4444443
No 45
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=95.96 E-value=0.0031 Score=62.00 Aligned_cols=37 Identities=35% Similarity=0.456 Sum_probs=25.9
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRD 80 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~ 80 (612)
+++.|+||||.|||||.+ ||. ++|+ .|+++++..+++
T Consensus 25 ~~~aiILAgG~s~Rm~~~-~K~--l~~i-----~gkpli~~~l~~ 61 (236)
T 2px7_A 25 EVSVLIPAAGNGLRLGRG-PKA--FLQV-----GGRTLLEWTLAA 61 (236)
T ss_dssp CCEEEEECCC-------C-CGG--GCBC-----SSSBHHHHHHHH
T ss_pred ceEEEEEcCCCCccCCCC-CCe--EEEE-----CCEEHHHHHHHh
Confidence 467899999999999976 998 8877 799999999887
No 46
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=95.94 E-value=0.0025 Score=62.14 Aligned_cols=37 Identities=24% Similarity=0.480 Sum_probs=31.6
Q ss_pred EEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHH
Q 007226 37 LGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQ 82 (612)
Q Consensus 37 ~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~ 82 (612)
+..|+||||.|+||| .+|. ++|+ .|+++++..++++.
T Consensus 1 m~aiILAgG~s~Rmg--~~K~--ll~~-----~G~pli~~~~~~l~ 37 (208)
T 3ngw_A 1 MKVAVLVGGVGRRIG--MEKT--EVML-----CGKKLIEWVLEKYS 37 (208)
T ss_dssp CEEEEECCCCCTTTT--SCGG--GCEE-----TTEEHHHHHHHHHT
T ss_pred CEEEEECCCchhhCC--CCCc--ccEE-----CCeeHHHHHHHHhc
Confidence 357899999999999 7898 8887 79999999988763
No 47
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=95.86 E-value=0.0085 Score=59.56 Aligned_cols=126 Identities=12% Similarity=0.119 Sum_probs=75.4
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++..|+||||.||||| +|. ++|+ .|++++++.++++.+.. . -.+++-|.. +.+.
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~--l~~~-----~gkpli~~~l~~l~~~~----------~-~~ivvv~~~-----~~i~ 55 (262)
T 1vic_A 2 SFTVIIPARFASSRLP---GKP--LADI-----KGKPMIQHVFEKALQSG----------A-SRVIIATDN-----ENVA 55 (262)
T ss_dssp CCEEEEECCCCCSSST---TGG--GCEE-----TTEEHHHHHHHHHHHTT----------C-SEEEEEESC-----HHHH
T ss_pred CcEEEEEcCCCCCCCC---CCc--cccC-----CCeEHHHHHHHHHHhCC----------C-ceEEEECCc-----HHHH
Confidence 4577999999999997 487 8887 69999999998876542 1 256666654 4566
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEEEEEEecCC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSN 195 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN 195 (612)
+++++ +|. .++.+. ...|.|-|.+..++ +.+...+-+++.+.+.|.
T Consensus 56 ~~~~~---~~~-----~~~~~~--------------------~~~~~g~~~~~~~~------~~l~~~~~~~vlv~~~D~ 101 (262)
T 1vic_A 56 DVAKS---FGA-----EVCMTS--------------------VNHNSGTERLAEVV------EKLAIPDNEIIVNIQGDE 101 (262)
T ss_dssp HHHHH---TTC-----EEEECC--------------------CSSCCHHHHHHHHH------HHTTCCTTCEEEECCTTC
T ss_pred HHHHh---cCC-----EEEECC--------------------ccccCChHHHHHHH------HHhccCCCCEEEEEeCCc
Confidence 77664 232 111110 01234444333332 223223558999999999
Q ss_pred CccccchhhHHHhhhhhhcCCceeEEE
Q 007226 196 VVAATDLTLLALAGIGLHHGKKLGFAS 222 (612)
Q Consensus 196 ~la~~Dp~i~~~~G~~~~~~~~~~~~~ 222 (612)
++...+ .+-.++......+.++.+.+
T Consensus 102 P~i~~~-~i~~l~~~~~~~~~~~~~~~ 127 (262)
T 1vic_A 102 PLIPPV-IVRQVADNLAKFNVNMASLA 127 (262)
T ss_dssp TTCCHH-HHHHHHHHHHHHTCSEEEEE
T ss_pred CccCHH-HHHHHHHHHHhcCCCEEEEE
Confidence 987641 12233444445566665554
No 48
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=95.81 E-value=0.004 Score=60.29 Aligned_cols=178 Identities=13% Similarity=0.095 Sum_probs=97.3
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
++..|+||||.||||| ||. ++|+ .|++++++.++++.+. .. .++|.|.. +.+.
T Consensus 2 ~~~aiIlA~G~g~R~~---~K~--l~~i-----~g~pli~~~l~~~~~~-------~~-----~i~v~~~~-----~~i~ 54 (234)
T 2y6p_A 2 RRAVIIPARLGSTRLK---EKP--LKNL-----LGKPLIRWVVEGLVKT-------GE-----RVILATDS-----ERVK 54 (234)
T ss_dssp CEEEEEECCSCCTTTT---TGG--GCEE-----TTEEHHHHHHHHHHTT-------TS-----CEEEEESC-----HHHH
T ss_pred ceEEEEEcCCCCCCCC---CCc--ceeE-----CCEEHHHHHHHHHHHh-------CC-----EEEEECCh-----HHHH
Confidence 4678999999999998 898 8887 6999999998887543 11 35566643 4555
Q ss_pred HHHHHcccCCCCCCceEEEEecccceEecCCCeeeeecCCCCcccCCCCchHhHHHHhcCchhHHHHCCcEEEEEEecCC
Q 007226 116 SLCERLRWFGRGQSSFQLFEQPLVPAVDAEDGQWLVMRPFAPVCKPGGHGAIWKLAHDKGIFKWFHDNGRKGATVRQVSN 195 (612)
Q Consensus 116 ~~le~~~~FGl~~~qV~~F~Q~~vP~l~~~dg~~~l~~~~~l~~~P~GhGdI~~aL~~sGlLd~l~~~Gikyv~v~~vDN 195 (612)
++++++ . ++ +... ...+.|-|+++.++.. + +-+++.+.+.|.
T Consensus 55 ~~~~~~----~---~~----------~~~~------------~~~~~g~~~~~~~~~~------~---~~~~vlv~~~D~ 96 (234)
T 2y6p_A 55 EVVEDL----C---EV----------FLTP------------SDLPSGSDRVLYVVRD------L---DVDLIINYQGDE 96 (234)
T ss_dssp HHHTTT----S---EE----------EECC------------TTCCSHHHHHHHHHTT------C---CCSEEEECCTTC
T ss_pred HHHHhc----e---EE----------EECC------------cccccchHHHHHHHHh------C---CCCEEEEecCCc
Confidence 655421 0 11 1100 1124556666654422 1 357999999999
Q ss_pred CccccchhhHHHhhhhhhcCCceeEEEEeec---CCCcccceEEEEEecCCCceecceEEEEecccCccCcCCCCCCCCC
Q 007226 196 VVAATDLTLLALAGIGLHHGKKLGFASCKRS---SGATEGINVLIEKKNLDGKWAYGLSCIEYTEFDKFGITRGPFSSNG 272 (612)
Q Consensus 196 ~la~~Dp~i~~~~G~~~~~~~~~~~~~v~rK---~~~~e~vGvl~~~~~~dG~~~~~~~vVEYsel~~~~~~~~~~~dg~ 272 (612)
++...+ .+-.++..+...+ +....+.+.. ..+ ..++++.. .+|+ ++.+.+-+.....+ . ..
T Consensus 97 P~~~~~-~i~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~---~~g~------v~~~~e~~~~~~~~---~-~~ 160 (234)
T 2y6p_A 97 PFVYEE-DIKLIFRELEKGE-RVVTLARKDKEAYERP-EDVKVVLD---REGY------ALYFSRSPIPYFRK---N-DT 160 (234)
T ss_dssp CCCCHH-HHHHHHHHHHHTC-SEEEEEEECSGGGGCT-TSCEEEEC---TTSB------EEEEESSCCSCCSS---C-CS
T ss_pred CcCCHH-HHHHHHHHHHhCC-CeEEEecCCHHHhcCC-CceEEEEc---CCCC------EeeeecCCCCcccc---c-cc
Confidence 887631 1222344444444 3332222211 012 22454432 4665 33444322110000 0 01
Q ss_pred ccccccceeeEEEEeHHHHHhhhc
Q 007226 273 LQADFPANTNILYVDLASAELVGS 296 (612)
Q Consensus 273 ~~s~f~~Ninnl~~~L~~l~~~l~ 296 (612)
. .+..|+...+|+-+.+.+...
T Consensus 161 -~-~~~~~~giy~~~~~~l~~~~~ 182 (234)
T 2y6p_A 161 -F-YPLKHVGIYGFRKETLMEFGA 182 (234)
T ss_dssp -S-CCEEEEEEEEEEHHHHHHHHH
T ss_pred -c-eeeEEEEEEEcCHHHHHHHHh
Confidence 1 222499999999998877653
No 49
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=95.69 E-value=0.0025 Score=63.78 Aligned_cols=61 Identities=20% Similarity=0.339 Sum_probs=43.3
Q ss_pred EEEecCCccccCC---CCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHHH
Q 007226 39 EIYPLGGSADRLG---LVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERIT 115 (612)
Q Consensus 39 vvlLaGGlGTRLG---~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T~ 115 (612)
+|+||||.||||+ .+.||- ++|+ .|++++++.++++... .| .-.++|.++. .++ +.
T Consensus 2 ~iIlAaG~GtRl~plt~~~PK~--llpv-----~gkpli~~~l~~l~~~-------~g---i~~iivv~~~---~~~-~~ 60 (255)
T 4evw_A 2 IVIPMAGMSSRFFKAGYTQPKY--MLEA-----HGQTLFEHSVNSFAAY-------FA---STPFLFIVRN---VYD-TA 60 (255)
T ss_dssp EEEECCSCCHHHHHTTCCSCGG--GCEE-----TTEEHHHHHHGGGGGG-------TT---TSCEEEEEES---STT-HH
T ss_pred EEEEcCCCCcccccCCCCCCcc--ccEE-----CCeEHHHHHHHHHhcc-------CC---CceEEEEECc---hhh-hH
Confidence 5789999999996 467998 8887 6899999999876542 13 1245666665 333 55
Q ss_pred HHHHH
Q 007226 116 SLCER 120 (612)
Q Consensus 116 ~~le~ 120 (612)
+++++
T Consensus 61 ~~~~~ 65 (255)
T 4evw_A 61 VFVRE 65 (255)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 50
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=95.65 E-value=0.0094 Score=60.50 Aligned_cols=64 Identities=20% Similarity=0.335 Sum_probs=48.8
Q ss_pred cEEEEEecCCccccCCC---CCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchH
Q 007226 36 ELGEIYPLGGSADRLGL---VDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHE 112 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~---~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~ 112 (612)
.+..|+||||.||||+- ..||. ++|+ .|++++++.++++... | .-.++|.|+. ..+
T Consensus 8 ~~~avIlAaG~gtRl~plt~~~pK~--ll~i-----~gkpli~~~l~~l~~~--------g---i~~i~vv~~~---~~~ 66 (302)
T 2e3d_A 8 VKKAVIPVAGLGTRMLPATKAIPKE--MLPL-----VDKPLIQYVVNECIAA--------G---ITEIVLVTHS---SKN 66 (302)
T ss_dssp CCEEEEECCSCCGGGTTTTSSSCGG--GCEE-----TTEEHHHHHHHHHHHT--------T---CCEEEEEECG---GGH
T ss_pred ccEEEEECCcCcccCCccccCCCce--eeEE-----CCeEHHHHHHHHHHHC--------C---CCEEEEEeCC---CHH
Confidence 35678999999999984 56888 8887 6899999999887653 2 1256777876 567
Q ss_pred HHHHHHHH
Q 007226 113 RITSLCER 120 (612)
Q Consensus 113 ~T~~~le~ 120 (612)
.+.+++.+
T Consensus 67 ~i~~~~~~ 74 (302)
T 2e3d_A 67 SIENHFDT 74 (302)
T ss_dssp HHHHHHSC
T ss_pred HHHHHHhc
Confidence 78887764
No 51
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=95.44 E-value=0.01 Score=60.20 Aligned_cols=64 Identities=14% Similarity=0.252 Sum_probs=48.5
Q ss_pred cEEEEEecCCccccCCC---CCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchH
Q 007226 36 ELGEIYPLGGSADRLGL---VDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHE 112 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~---~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~ 112 (612)
.+..|+||||.||||+- ..||. ++|+ .|++++++.++++.+. | + -.++|-|+. ..+
T Consensus 14 ~~~avIlAaG~gtRl~plt~~~pK~--ll~i-----~gkpli~~~l~~l~~~--------g--~-~~i~vv~~~---~~~ 72 (297)
T 2ux8_A 14 LRKAVFPVAGLGTRFLPATKAMPKE--MLPV-----VDRPLIQYAVDEAVEA--------G--I-EQMIFVTGR---GKS 72 (297)
T ss_dssp CCEEEEEECCCCGGGTTTTSSSCGG--GCEE-----TTEEHHHHHHHHHHHT--------T--C-CEEEEEECT---TCH
T ss_pred ccEEEEECCCCccccCccccCCCce--eeeE-----CCeEHHHHHHHHHHhC--------C--C-CEEEEEeCC---CHH
Confidence 56788999999999974 56888 8887 6899999999887653 2 1 256777876 467
Q ss_pred HHHHHHHH
Q 007226 113 RITSLCER 120 (612)
Q Consensus 113 ~T~~~le~ 120 (612)
.+.+++.+
T Consensus 73 ~i~~~~~~ 80 (297)
T 2ux8_A 73 ALEDHFDI 80 (297)
T ss_dssp HHHHHTSC
T ss_pred HHHHHHhh
Confidence 77777653
No 52
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=95.27 E-value=0.0021 Score=61.64 Aligned_cols=50 Identities=16% Similarity=0.251 Sum_probs=39.5
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCC
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSS 106 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~ 106 (612)
++..|+||||.||||| .||. ++|+ .|+++++..++++.+. .-.++|-|+.
T Consensus 14 ~~~~iILA~G~g~Rmg--~~K~--ll~i-----~g~pll~~~l~~l~~~------------~~~i~vv~~~ 63 (201)
T 2e8b_A 14 VNTCYVLAGGKSKRFG--EDKL--LYEI-----KGKKVIERVYETAKSV------------FKEVYIVAKD 63 (201)
T ss_dssp CCEEEEEEESSCCCCS--TTHH--HHHH-----HHHHHHHHHHHHHHTT------------CSEEEEEESC
T ss_pred CceEEEECCCCCccCC--CCcc--cceE-----CceEHHHHHHHHHHHh------------CCEEEEEeCc
Confidence 4678999999999999 7898 8887 6899999998877542 1156777776
No 53
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=95.24 E-value=0.007 Score=58.87 Aligned_cols=42 Identities=17% Similarity=0.224 Sum_probs=28.8
Q ss_pred cCcEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHH
Q 007226 34 LPELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQA 83 (612)
Q Consensus 34 l~k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~ 83 (612)
+.++..|+||||.|||||-. ||. ++|+ .|++++++.++++.+
T Consensus 16 m~~~~~iIlA~G~g~R~~~~-~K~--l~~i-----~g~pli~~~l~~l~~ 57 (232)
T 2xme_A 16 IKLMKAVILAAGLGTRLGGV-PKP--LVRV-----GGCEIILRTMKLLSP 57 (232)
T ss_dssp CCCEEEEEEECC------CC-CGG--GCEE-----TTEEHHHHHHHHHGG
T ss_pred cccceEEEECCcCcCcCCCC-CcE--EeEE-----CCEEHHHHHHHHHHH
Confidence 44688899999999999744 898 8887 689999998877643
No 54
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=95.19 E-value=0.012 Score=60.71 Aligned_cols=62 Identities=21% Similarity=0.236 Sum_probs=46.4
Q ss_pred EEEEEecCCccccCCC---CCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHH
Q 007226 37 LGEIYPLGGSADRLGL---VDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHER 113 (612)
Q Consensus 37 ~avvlLaGGlGTRLG~---~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~ 113 (612)
+.+|+||||.||||+- ..||- ++|+ .|++++++.++++... | .-.++|.|+. ..+.
T Consensus 13 ~~aVIlAaG~gtRl~plt~~~pK~--ll~i-----~gkpli~~~l~~l~~~--------g---i~~iivv~~~---~~~~ 71 (323)
T 2pa4_A 13 KTVVVPAAGLGTRFLPATKTVPKE--LLPV-----VDTPGIELIAAEAAEL--------G---ATRLAIITAP---NKAG 71 (323)
T ss_dssp CEEEEECCCCCGGGTTGGGTSCGG--GCEE-----TTEEHHHHHHHHHHHT--------T---CCEEEEEECT---TCHH
T ss_pred eEEEEECCCCccccCccccCCCce--eeeE-----CCEEHHHHHHHHHHhC--------C---CCEEEEEecC---cHHH
Confidence 5678999999999975 57888 8887 6899999999887653 2 1256777776 4566
Q ss_pred HHHHHH
Q 007226 114 ITSLCE 119 (612)
Q Consensus 114 T~~~le 119 (612)
+.+++.
T Consensus 72 i~~~~~ 77 (323)
T 2pa4_A 72 VLAHFE 77 (323)
T ss_dssp HHHTTS
T ss_pred HHHHHh
Confidence 666554
No 55
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=94.85 E-value=0.013 Score=61.25 Aligned_cols=64 Identities=16% Similarity=0.137 Sum_probs=43.7
Q ss_pred EEEEecCCccccCC----CCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHH
Q 007226 38 GEIYPLGGSADRLG----LVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHER 113 (612)
Q Consensus 38 avvlLaGGlGTRLG----~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~ 113 (612)
..|+||||.||||+ ...||- ++|+. .+++++|..++++.... | + -.++|.|+. .-.+.
T Consensus 3 ~~VILAgG~GtRl~Pls~~~~pK~--ll~l~----g~~pli~~~l~~l~~~~-------~--~-~~iivvt~~--~~~~~ 64 (336)
T 2x65_A 3 KALILAGGSGERFWPLSTPETPKQ--FLKLF----GNKSLMRWTFERVLEEM-------D--P-KDVIVVTHK--DYVER 64 (336)
T ss_dssp EEEEECCCBCGGGTTTSCTTCBGG--GCCCB----TTBCHHHHHHHHHHTTC-------C--G-GGEEEEEEG--GGHHH
T ss_pred EEEEECCCCCccCCCCcCCCCCce--EEECC----CCCcHHHHHHHHHhccC-------C--C-CcEEEEcCh--HHHHH
Confidence 46889999999998 557998 88874 33999999998886541 1 1 145666665 12344
Q ss_pred HHHHHH
Q 007226 114 ITSLCE 119 (612)
Q Consensus 114 T~~~le 119 (612)
+.+++.
T Consensus 65 i~~~l~ 70 (336)
T 2x65_A 65 TKKELP 70 (336)
T ss_dssp HHHHCT
T ss_pred HHHHhh
Confidence 555544
No 56
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=94.60 E-value=0.016 Score=61.61 Aligned_cols=41 Identities=17% Similarity=0.169 Sum_probs=35.5
Q ss_pred cEEEEEecCCccccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHH
Q 007226 36 ELGEIYPLGGSADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQA 83 (612)
Q Consensus 36 k~avvlLaGGlGTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~ 83 (612)
+++.|+||||.|||||...||. ++|+ .|++++++.++++++
T Consensus 3 ki~aIILAaG~ssRmg~~~pK~--ll~l-----~GkPLi~~~l~~l~~ 43 (371)
T 1w55_A 3 EMSLIMLAAGNSTRFNTKVKKQ--FLRL-----GNDPLWLYATKNLSS 43 (371)
T ss_dssp CEEEEEECCSCCTTTCSSSCGG--GCEE-----BTEEHHHHHHHHHHT
T ss_pred ccEEEEECCCCCccCCCCCCcc--eEEE-----CCeEHHHHHHHHHHc
Confidence 5778999999999999767898 8887 699999999988755
No 57
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=93.65 E-value=0.034 Score=58.05 Aligned_cols=42 Identities=29% Similarity=0.316 Sum_probs=33.9
Q ss_pred EEEEEecCCccccCC----CCCCCCCceeeCccCCCCCCcchHHHHHHHHHH
Q 007226 37 LGEIYPLGGSADRLG----LVDHETGECLPAAMLPYCGRTLLEGLIRDLQAR 84 (612)
Q Consensus 37 ~avvlLaGGlGTRLG----~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~l 84 (612)
+..|+||||.||||. ...||- ++|+. .++|++|..++++...
T Consensus 3 m~~VILAgG~GtRl~Pls~~~~pK~--ll~l~----G~~pli~~~l~~l~~~ 48 (337)
T 2cu2_A 3 TYALVMAGGRGERLWPLSREDRPKP--FLPLF----EGKTLLEATLERLAPL 48 (337)
T ss_dssp EEEEEECCCCCGGGTTTCBTTBCGG--GCBCG----GGCBHHHHHHHHHTTT
T ss_pred eEEEEEcCCCcccCCccCCCCCCce--EEEcC----CCChHHHHHHHHHhCc
Confidence 567899999999997 456898 88874 3399999999887654
No 58
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=93.14 E-value=0.049 Score=53.16 Aligned_cols=41 Identities=32% Similarity=0.510 Sum_probs=32.8
Q ss_pred cEEEEEecCCc---cccCCCCCCCCCceeeCccCCCCCCcchHHHHHHHHHH
Q 007226 36 ELGEIYPLGGS---ADRLGLVDHETGECLPAAMLPYCGRTLLEGLIRDLQAR 84 (612)
Q Consensus 36 k~avvlLaGGl---GTRLG~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~l 84 (612)
++..|+||||. |+||| ..||. ++|+ .|++++++.++++.+.
T Consensus 2 ~~~~vIlAaG~tRl~~r~~-~~~K~--l~~i-----~g~pll~~~l~~l~~~ 45 (232)
T 2dpw_A 2 RPSAIVLAGGKEAWAERFG-VGSKA--LVPY-----RGRPMVEWVLEALYAA 45 (232)
T ss_dssp CCEEEEECCCBCSGGGTTT-CSBGG--GSEE-----TTEETHHHHHHHHHHT
T ss_pred ceeEEEECCCCCccccccC-CCCce--eeEE-----CCEEHHHHHHHHHHhc
Confidence 35678899999 77776 36898 8887 6999999999887654
No 59
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=93.09 E-value=0.04 Score=57.79 Aligned_cols=59 Identities=24% Similarity=0.344 Sum_probs=44.3
Q ss_pred EEEEecCCccccCC---CCCCCCCceeeCccCCCCCCcchHHHHHHHHHHHHHhHhhcCCcceeeEEEecCCCCCchHHH
Q 007226 38 GEIYPLGGSADRLG---LVDHETGECLPAAMLPYCGRTLLEGLIRDLQAREFLYFKLYGKQCITPVAIMTSSAKNNHERI 114 (612)
Q Consensus 38 avvlLaGGlGTRLG---~~~pK~g~~lpv~~~~~~gks~Lql~~e~I~~lq~la~k~~g~~~~iPl~IMTS~~~~T~~~T 114 (612)
..|+||||.||||+ ...||. ++|+ .|++++++.++++.+. | .-.++|.|+. . .
T Consensus 2 ~aiIlA~G~g~R~~plt~~~~K~--ll~i-----~g~pli~~~l~~l~~~--------~---~~~i~vv~~~--~----i 57 (401)
T 2ggo_A 2 KAFILAAGSGERLEPITHTRPKA--FVPI-----LSKPLIEYQIEYLRKC--------G---IRDITVIVSS--K----N 57 (401)
T ss_dssp EEEEECCCCCGGGTTGGGTSCGG--GCEE-----TTEEHHHHHHHHHHHT--------T---CCEEEEEECG--G----G
T ss_pred eEEEEcCcCccccCcccCCCCcc--eeeE-----CCEeHHHHHHHHHHHC--------C---CCEEEEEeCH--H----H
Confidence 46899999999997 467898 8887 6899999999887654 2 1156777776 2 6
Q ss_pred HHHHHH
Q 007226 115 TSLCER 120 (612)
Q Consensus 115 ~~~le~ 120 (612)
.+++++
T Consensus 58 ~~~~~~ 63 (401)
T 2ggo_A 58 KEYFEK 63 (401)
T ss_dssp HHHHHH
T ss_pred HHHhhc
Confidence 667765
No 60
>3jtz_A Integrase; four stranded beta-sheet, DNA binding protein; 1.30A {Yersinia pestis} PDB: 3rmp_A
Probab=39.67 E-value=31 Score=28.88 Aligned_cols=32 Identities=25% Similarity=0.562 Sum_probs=22.8
Q ss_pred CCCceEEEeccccccccCCCcceEEEEEeCceEEEEE
Q 007226 573 GNSGLVVQLDPIEQNMMDTGSWHWNYKINGSHIVLEL 609 (612)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 609 (612)
|++||.+..+|= ++-+|++.|++++-+..+.|
T Consensus 22 Dg~GL~L~V~ps-----G~K~w~~ryr~~Gk~~~~~L 53 (88)
T 3jtz_A 22 DSHGLYLLVKPG-----GSRHWYLKYRISGKESRIAL 53 (88)
T ss_dssp CSTTEEEEECTT-----SCEEEEEEEEETTEEEEEEE
T ss_pred cCCceEEEEecC-----CCEEEEEEEEeCCeEEEEEe
Confidence 346787777763 45789999999886666554
No 61
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=37.36 E-value=64 Score=32.68 Aligned_cols=73 Identities=19% Similarity=0.166 Sum_probs=52.4
Q ss_pred EEeeCcEEeee------CCCceecccceeeeEEEEEEeccceeEeeceeE--ecC----------eEEEecCCeEEEEee
Q 007226 511 KVLNKGIDWDC------GDNTYWKHDVQWFEALKVILHGNAEFEASDVTL--QGN----------HVFEVPDGHKLKITS 572 (612)
Q Consensus 511 ~V~N~G~~~~~------~~~~~w~~~~~r~e~~~i~~~g~~~f~a~~v~~--~g~----------~~~~vp~g~~~~~~~ 572 (612)
.=.|+||.+.. ....-+..+..|.|.|-|.|.|.++.++.+.++ .|. .+.=||.|-+.++++
T Consensus 20 tp~~a~~~y~~f~~~~L~~Ge~~~~~~~~~E~~iv~l~G~~~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~~v~i~a 99 (270)
T 2qjv_A 20 SPQNAGWEYVGFDVWQLXAGESITLPSDERERCLVLVAGLASVXAADSFFYRIGQRMSPFERIPAYSVYLPHHTEAXVTA 99 (270)
T ss_dssp CHHHHTSSSCEEEEEEECTTCEEEECCSSEEEEEEEEESCEEEEETTEEEEEECCCSSGGGCSCCCEEEECSSCCEEEEE
T ss_pred CCCCCCcEEeEEEEEEecCCCEEEecCCCcEEEEEEecceEEEEECCEEEeccccccccccCCCCcEEEECCCCEEEEEe
Confidence 33456766321 133556678889999999999999999999877 343 588899999999887
Q ss_pred CCC-ceEEEecc
Q 007226 573 GNS-GLVVQLDP 583 (612)
Q Consensus 573 ~~~-~~~~~~~~ 583 (612)
..+ .+.+.-.|
T Consensus 100 ~~~~~~~v~sAp 111 (270)
T 2qjv_A 100 ETDLELAVCSAP 111 (270)
T ss_dssp SSSEEEEEEEEE
T ss_pred cCCceEEEEeee
Confidence 654 44444444
No 62
>3cfu_A Uncharacterized lipoprotein YJHA; YJHA_bacsu, SR562, NESG, structural genomics, PSI-2, protein structure initiative; 2.40A {Bacillus subtilis}
Probab=31.45 E-value=94 Score=28.69 Aligned_cols=62 Identities=15% Similarity=0.108 Sum_probs=34.3
Q ss_pred eEEEeeeEEeeCcEEeeeCCC-ceec--ccceeeeEEEEEEec-cceeE----eeceeEecCeEEEecCCe
Q 007226 504 RCKLNNVKVLNKGIDWDCGDN-TYWK--HDVQWFEALKVILHG-NAEFE----ASDVTLQGNHVFEVPDGH 566 (612)
Q Consensus 504 ~~~~~~~~V~N~G~~~~~~~~-~~w~--~~~~r~e~~~i~~~g-~~~f~----a~~v~~~g~~~~~vp~g~ 566 (612)
+-.+-+|+|+|.|=+=...+. .|+= .+-.+.+.- +.... +-.|. |.+=+++|..+|+||.|.
T Consensus 47 ~fviV~VTIeN~g~e~~~~s~~~F~L~d~dG~~~~~~-~~~~~~~~~l~~g~L~pG~kvtG~ivFeVP~~~ 116 (159)
T 3cfu_A 47 ERLIIEVTMENIGEDSISYNFIGFDLRDKNDQSVRPV-FSIEEKGRILMGGTLVSGKKVTGVLSYVIPKGE 116 (159)
T ss_dssp EEEEEEEEEEECSSSCEEEEGGGEEEECTTCCBCCCE-ECSTTTTTBCCEEEECTTCEEEEEEEEEESTTC
T ss_pred EEEEEEEEEEECCCCceeeCcccEEEEeCCCCEEece-eeecccCCcccccccCCCCEEEEEEEEEECCCC
Confidence 456667899998843332222 1211 333444332 11122 22343 355679999999999876
No 63
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=29.00 E-value=4.3e+02 Score=27.04 Aligned_cols=76 Identities=20% Similarity=0.256 Sum_probs=41.7
Q ss_pred eeceEEEeeeEEee--CcEEeeeCCCceeccccee--eeEEEEEEecc-ceeEeeceeEecCeEEEecCCeEEEEeeCCC
Q 007226 501 RCGRCKLNNVKVLN--KGIDWDCGDNTYWKHDVQW--FEALKVILHGN-AEFEASDVTLQGNHVFEVPDGHKLKITSGNS 575 (612)
Q Consensus 501 ~~~~~~~~~~~V~N--~G~~~~~~~~~~w~~~~~r--~e~~~i~~~g~-~~f~a~~v~~~g~~~~~vp~g~~~~~~~~~~ 575 (612)
.|-.|.|+|..|.| .++.+++.+|+.-.+-.-+ | .+.|==+|. .+=.-+||++++..+.-.-.|.|++..+++.
T Consensus 173 ~s~nV~I~n~~i~~gDDcIaiksg~nI~i~n~~~~~gh-GisiGS~G~~~~~~v~nV~v~n~~~~~~~~GirIKt~~g~~ 251 (349)
T 1hg8_A 173 SSDHVTLDNNHVYNQDDCVAVTSGTNIVVSNMYCSGGH-GLSIGSVGGKSDNVVDGVQFLSSQVVNSQNGCRIKSNSGAT 251 (349)
T ss_dssp SCEEEEEEEEEEECSSCSEEESSEEEEEEEEEEEESSC-CEEEEEESSSSCCEEEEEEEEEEEEEEEEEEEEEEEETTCC
T ss_pred cccEEEEEeeEEecCCCeEEeeCCeEEEEEeEEEeCCc-ceEEccccccccCCEEEEEEEEEEEECCCcEEEEEecCCCC
Confidence 35578888888876 3455554322211110000 1 122211121 1234678888888888888888888766655
Q ss_pred ce
Q 007226 576 GL 577 (612)
Q Consensus 576 ~~ 577 (612)
|.
T Consensus 252 G~ 253 (349)
T 1hg8_A 252 GT 253 (349)
T ss_dssp EE
T ss_pred cc
Confidence 44
No 64
>3pet_A Putative adhesin; right-handed beta-helix, structural genomics, joint center F structural genomics, JCSG; HET: PG4; 2.07A {Bacteroides fragilis nctc 9343}
Probab=28.03 E-value=2.3e+02 Score=27.02 Aligned_cols=51 Identities=12% Similarity=0.108 Sum_probs=35.0
Q ss_pred eeeEEEEEEeccceeEeece-------eEecCeEEEecCCeEEEEeeCCC-ceEEEecc
Q 007226 533 WFEALKVILHGNAEFEASDV-------TLQGNHVFEVPDGHKLKITSGNS-GLVVQLDP 583 (612)
Q Consensus 533 r~e~~~i~~~g~~~f~a~~v-------~~~g~~~~~vp~g~~~~~~~~~~-~~~~~~~~ 583 (612)
+.+.+.+.+.|.+.++|.++ .+.|..-++|=.--+|.++-.++ -+.+.=+|
T Consensus 147 ~a~~~~~~~~Gsg~i~a~~l~~~~~~v~~~Gsg~~~v~~~~~l~~~~sGsG~i~~~G~P 205 (221)
T 3pet_A 147 TAQIAALHSKGVGNIEAGNLRANAVEASSQGVGDITCNATESIDAAVRGVGSIKYKGSP 205 (221)
T ss_dssp EEEEEEEEECSBSCEEEEEEEEEEEEEEECSBSCEEEEEEEEEEEEECSBSCEEEESCC
T ss_pred EeeeEEEEEeccceEEeeeeeeeEEEEEEEccccEEEEEcceEEEEEEEEEEEEEEccc
Confidence 56677888899999888754 35576666666667777775554 55665554
No 65
>3sft_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; modified doubly-wound/fold, chemoreceptor; 2.15A {Thermotoga maritima}
Probab=26.71 E-value=51 Score=31.62 Aligned_cols=66 Identities=17% Similarity=0.139 Sum_probs=42.7
Q ss_pred eCCCceec---ccceeeeEEEEEEeccceeEee-ceeEecCeEEEecCCeEEEEeeCCCceEEEeccccccccCCCc
Q 007226 521 CGDNTYWK---HDVQWFEALKVILHGNAEFEAS-DVTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGS 593 (612)
Q Consensus 521 ~~~~~~w~---~~~~r~e~~~i~~~g~~~f~a~-~v~~~g~~~~~vp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (612)
+.+..|=+ .-+.|.=.+.++ +|+ .-.++-+++|..|.|++|.+..++.+.+..|++-++.....||
T Consensus 42 Hm~~~f~~~la~~L~~~~~l~V~-------ea~dg~~l~pG~vYiaP~~~hl~v~~~~~~~~~~l~~~~~~~~~rPs 111 (193)
T 3sft_A 42 HMPPGFTKSLAMRLDSTSELTVK-------EAEDGEEVKPGFVYIAPGDFHLGLKAQNGKVFFFLDKSDKINNVRPA 111 (193)
T ss_dssp CCCTTCHHHHHHHHHHHCSSEEE-------ECCTTCBCCTTEEEECCTTSEEEEEEETTEEEEEEECCCCSSSCSSC
T ss_pred CCCCCcHHHHHHHHhccCCCcEE-------EeCCCCEecCCEEEEcCCCcEEEEEEcCCceEEEECCCCccCCCCCC
Confidence 34554433 344455455553 333 3457899999999999999998777777777765543344444
No 66
>1chd_A CHEB methylesterase; chemotaxis protein, serine hydrolase, carboxyl methylesteras; 1.75A {Salmonella typhimurium} SCOP: c.40.1.1
Probab=25.99 E-value=53 Score=31.77 Aligned_cols=42 Identities=7% Similarity=0.154 Sum_probs=32.9
Q ss_pred eeEecCeEEEecCCeEEEEeeCCCceEEEeccccccccCCCc
Q 007226 552 VTLQGNHVFEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGS 593 (612)
Q Consensus 552 v~~~g~~~~~vp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (612)
-.++-+++|..|.|++|.+..++.+.+..+++-++.....||
T Consensus 72 ~~l~pg~vYiaP~~~hl~v~~~~~~~~~~l~~~~~~~~~rPs 113 (203)
T 1chd_A 72 ERVLPGHAYIAPGDKHMELARSGANYQIKIHDGPPVNRHRPS 113 (203)
T ss_dssp CBCCTTEEEECCTTSEEEEEEETTEEEEEEECCCCBTTBSSC
T ss_pred CEecCCEEEEcCCCceEEEEeCCceEEEEECCCCccCCCCCC
Confidence 468899999999999999998877777887766554444554
No 67
>2k6w_A Putative uncharacterized protein TTHA1943; PCUA, copper transfer protein, metal transport; NMR {Thermus thermophilus} PDB: 2k6y_A 2k6z_A 2k70_A
Probab=25.89 E-value=1.3e+02 Score=26.51 Aligned_cols=48 Identities=17% Similarity=0.303 Sum_probs=38.1
Q ss_pred EEecCCeEEEEeeCCCceEEEeccccccccCCCcceEEEEE-eCceEEEEE
Q 007226 560 FEVPDGHKLKITSGNSGLVVQLDPIEQNMMDTGSWHWNYKI-NGSHIVLEL 609 (612)
Q Consensus 560 ~~vp~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~-~~~~~~~~~ 609 (612)
++||+|-.+.+.|+ |.++-|..|++..-.+.+-.-...| +++.|.+++
T Consensus 67 i~ipag~~v~l~PG--G~HvML~gl~~~l~~G~~v~ltL~Fe~~~~v~v~~ 115 (120)
T 2k6w_A 67 LEVPPKGRVELKPG--GYHFMLLGLKRPLKAGEEVELDLLFAGGKVLKVVL 115 (120)
T ss_dssp EEECTTCEEEECTT--TEEEEEEEESSCBCTTCEEEEEEEETTTEEEEEEE
T ss_pred EeECCCCEEeccCC--ceEEEEeCCCCCCCCCCEEEEEEEECCCCeEEEEE
Confidence 88999999999877 7888888887766667777778888 557777654
No 68
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=25.67 E-value=1.1e+02 Score=26.92 Aligned_cols=51 Identities=18% Similarity=0.307 Sum_probs=30.9
Q ss_pred EeeeCCCceecccceeeeEEEEEEeccceeEeec---eeEecCeEEEecCCeEEE
Q 007226 518 DWDCGDNTYWKHDVQWFEALKVILHGNAEFEASD---VTLQGNHVFEVPDGHKLK 569 (612)
Q Consensus 518 ~~~~~~~~~w~~~~~r~e~~~i~~~g~~~f~a~~---v~~~g~~~~~vp~g~~~~ 569 (612)
.|++.--.||-+.-...|.|-| |+|.++++..| +++.---++.+|+|++-+
T Consensus 46 vWe~tPG~~~~~~~~~~E~~~i-LeG~~~lt~ddG~~~~l~aGD~~~~P~G~~gt 99 (116)
T 3es4_A 46 VWMAEPGIYNYAGRDLEETFVV-VEGEALYSQADADPVKIGPGSIVSIAKGVPSR 99 (116)
T ss_dssp EEEECSEEEEECCCSEEEEEEE-EECCEEEEETTCCCEEECTTEEEEECTTCCEE
T ss_pred EEecCCceeECeeCCCcEEEEE-EEeEEEEEeCCCeEEEECCCCEEEECCCCeEE
Confidence 4665455555555444588765 78888876543 455555566666666544
No 69
>3ju0_A Phage integrase; four stranded beta-sheet, DNA binding protein; 1.60A {Pectobacterium atrosepticum}
Probab=25.29 E-value=86 Score=27.16 Aligned_cols=30 Identities=20% Similarity=0.505 Sum_probs=21.4
Q ss_pred CceEEEeccccccccCCCcceEEEEEeCceEEEEE
Q 007226 575 SGLVVQLDPIEQNMMDTGSWHWNYKINGSHIVLEL 609 (612)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 609 (612)
+||.+..+|= ++-+|++.|+++|-+..+.|
T Consensus 24 ~GL~L~V~ps-----G~K~w~~rYr~~GK~~~~~L 53 (108)
T 3ju0_A 24 FGMHLLVHPN-----GSKYWRLSYRFEKKQRLLAL 53 (108)
T ss_dssp TTEEEEECTT-----SCEEEEEEEEETTEEEEEEE
T ss_pred CceEEEEEcC-----CCEEEEEEEEEcCceEEEec
Confidence 5777776663 45789999999886665554
No 70
>2oyz_A UPF0345 protein VPA0057; unknown function, structural genomi 2, protein structure initiative, midwest center for structu genomics, MCSG; 1.71A {Vibrio parahaemolyticus} SCOP: b.82.1.22
Probab=21.42 E-value=1.2e+02 Score=25.94 Aligned_cols=42 Identities=19% Similarity=0.316 Sum_probs=28.8
Q ss_pred ecccceeeeEEEE-------EEeccceeEeeceeEecCeEEEecCCeEEEEee
Q 007226 527 WKHDVQWFEALKV-------ILHGNAEFEASDVTLQGNHVFEVPDGHKLKITS 572 (612)
Q Consensus 527 w~~~~~r~e~~~i-------~~~g~~~f~a~~v~~~g~~~~~vp~g~~~~~~~ 572 (612)
|-+.-...|.|+| .|.|..|+ .++.....|+||++-+..++-
T Consensus 35 ytF~T~~~E~M~vvsG~~~V~lpg~~ew----~~~~aGesF~Vpans~F~l~v 83 (94)
T 2oyz_A 35 YTFGTQAPERMTVVKGALVVKRVGEADW----TTYSSGESFDVEGNSSFELQV 83 (94)
T ss_dssp EEEEESSCEEEEEEESEEEEEETTCSSC----EEEETTCEEEECSSEEEEEEE
T ss_pred EEEcCCCeEEEEEEEeEEEEEcCCCCcC----EEECCCCEEEECCCCEEEEEE
Confidence 4555555665554 45555444 788899999999998777653
No 71
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=20.88 E-value=5.6e+02 Score=24.57 Aligned_cols=78 Identities=14% Similarity=0.110 Sum_probs=48.6
Q ss_pred ceEEEeeeEEeeCcEEeeeCCCceecccceeeeEEEEEEeccceeEeec-------eeEecCeEEEecCCeEEEEeeCCC
Q 007226 503 GRCKLNNVKVLNKGIDWDCGDNTYWKHDVQWFEALKVILHGNAEFEASD-------VTLQGNHVFEVPDGHKLKITSGNS 575 (612)
Q Consensus 503 ~~~~~~~~~V~N~G~~~~~~~~~~w~~~~~r~e~~~i~~~g~~~f~a~~-------v~~~g~~~~~vp~g~~~~~~~~~~ 575 (612)
|.+.+.++...+-=.+..-..+..-+ -+.+.+++.+.|.+.++|.+ |.+.|..-++|=.--.+.++-.++
T Consensus 149 G~i~~~~l~~~~l~~~~~Gsg~i~l~---G~a~~~~~~~sGsg~i~~~~l~~~~~~v~~sGsG~i~v~~~~~l~~~~sGs 225 (250)
T 3jx8_A 149 GNIIAKDIQLDNLSCSLASSGEIEVI---GTVDRASFNVAGSGEIKAFDCQARKAECNIASSGEISVYATQILDANIVGS 225 (250)
T ss_dssp CEEEEEEEEEEEEEEEEESSCEEEEE---EEEEEEEEEEESSCEEEEEEEEEEEEEEEEESSCEEEEEEEEEEEEEEESS
T ss_pred eEEEEEeeeccEEEEEEEeeEEEEEE---EEEeeEEEEEEecEEEEEecCeeeeEEEEEEecCeEEEEEeceEEEEEEee
Confidence 45555555444443343333344333 26788888889999999876 456677777777666777665554
Q ss_pred -ceEEEecc
Q 007226 576 -GLVVQLDP 583 (612)
Q Consensus 576 -~~~~~~~~ 583 (612)
.+.+.=+|
T Consensus 226 G~i~~~g~p 234 (250)
T 3jx8_A 226 GEIHYKGDP 234 (250)
T ss_dssp CEEEEESCC
T ss_pred EEEEEEcCC
Confidence 55665555
Done!