Query 007227
Match_columns 612
No_of_seqs 458 out of 2697
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 20:25:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007227.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007227hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xzw_A Purple acid phosphatase 100.0 1.6E-61 5.6E-66 527.1 40.5 386 165-594 21-423 (426)
2 2qfp_A Purple acid phosphatase 100.0 1.1E-60 3.7E-65 520.3 39.3 389 165-597 15-419 (424)
3 2yeq_A Apased, PHOD, alkaline 100.0 1.2E-34 4E-39 322.7 36.1 377 169-596 8-483 (527)
4 3tgh_A Glideosome-associated p 100.0 1.1E-34 3.9E-39 305.7 24.5 264 286-596 3-310 (342)
5 1ute_A Protein (II purple acid 100.0 4.1E-30 1.4E-34 265.3 19.2 264 286-596 6-306 (313)
6 3ib7_A ICC protein; metallopho 99.9 3E-22 1E-26 208.7 23.2 250 284-583 23-282 (330)
7 3d03_A Phosphohydrolase; glyce 99.9 1.9E-21 6.5E-26 197.0 22.7 243 287-579 1-254 (274)
8 2nxf_A Putative dimetal phosph 99.9 3.5E-21 1.2E-25 198.8 21.2 250 285-578 4-312 (322)
9 2xmo_A LMO2642 protein; phosph 99.7 1.9E-16 6.5E-21 172.4 23.8 216 284-506 37-288 (443)
10 1uf3_A Hypothetical protein TT 99.5 2E-12 7E-17 126.6 19.1 171 287-501 6-190 (228)
11 2yvt_A Hypothetical protein AQ 99.4 5.9E-12 2E-16 126.3 16.2 181 287-501 6-222 (260)
12 2q8u_A Exonuclease, putative; 99.3 5.3E-12 1.8E-16 132.4 13.0 256 285-590 17-289 (336)
13 3ck2_A Conserved uncharacteriz 99.3 2.2E-10 7.6E-15 108.7 18.4 165 287-590 7-172 (176)
14 1z2w_A Vacuolar protein sortin 99.2 4.9E-10 1.7E-14 107.9 19.1 180 287-592 11-191 (192)
15 1nnw_A Hypothetical protein; s 99.2 5.5E-11 1.9E-15 119.1 12.5 211 287-577 2-222 (252)
16 2a22_A Vacuolar protein sortin 99.2 2.5E-10 8.6E-15 112.1 15.7 187 286-591 25-214 (215)
17 3rl5_A Metallophosphoesterase 99.2 2.5E-10 8.7E-15 117.1 14.9 209 284-542 57-280 (296)
18 3av0_A DNA double-strand break 99.0 4.3E-09 1.5E-13 112.5 17.4 185 285-505 19-212 (386)
19 3tho_B Exonuclease, putative; 99.0 6.9E-10 2.4E-14 118.4 11.0 198 287-506 1-217 (379)
20 3rqz_A Metallophosphoesterase; 99.0 2.9E-09 1E-13 106.5 13.5 151 287-503 4-154 (246)
21 3qfm_A SAPH, putative uncharac 98.9 8E-09 2.7E-13 105.0 14.8 216 286-578 11-228 (270)
22 1s3l_A Hypothetical protein MJ 98.9 3E-08 1E-12 95.4 15.8 61 287-372 26-88 (190)
23 1xm7_A Hypothetical protein AQ 98.7 2E-08 6.8E-13 96.7 7.6 149 287-505 2-153 (195)
24 2kkn_A Uncharacterized protein 98.7 3.6E-07 1.2E-11 86.9 15.2 64 287-372 23-86 (178)
25 3t1i_A Double-strand break rep 98.6 7.1E-07 2.4E-11 96.2 18.4 87 283-372 29-152 (431)
26 1ii7_A MRE11 nuclease; RAD50, 98.6 2.7E-07 9.4E-12 96.3 14.7 82 287-372 1-88 (333)
27 4fbw_A DNA repair protein RAD3 98.6 3E-06 1E-10 90.9 20.5 258 284-592 11-317 (417)
28 4fbk_A DNA repair and telomere 98.5 2E-06 6.9E-11 93.1 18.2 86 284-372 74-196 (472)
29 1hp1_A 5'-nucleotidase; metall 98.2 4.9E-06 1.7E-10 92.1 11.0 200 286-504 8-232 (516)
30 2z1a_A 5'-nucleotidase; metal- 98.2 1.2E-05 4.1E-10 89.8 13.9 189 285-505 28-244 (552)
31 3qfk_A Uncharacterized protein 98.1 0.00011 3.7E-09 81.6 19.7 205 285-504 18-252 (527)
32 2z06_A Putative uncharacterize 97.9 0.00017 5.8E-09 72.0 15.6 169 287-503 1-174 (252)
33 1t70_A Phosphatase; crystal, X 97.9 0.00017 5.8E-09 72.2 15.1 172 287-504 1-178 (255)
34 3ztv_A NAD nucleotidase, NADN; 97.9 3.8E-05 1.3E-09 86.2 11.2 192 284-504 10-231 (579)
35 3ive_A Nucleotidase; structura 97.9 9.1E-05 3.1E-09 81.8 13.8 204 286-503 6-237 (509)
36 4h2g_A 5'-nucleotidase; dimer, 97.9 4.7E-05 1.6E-09 84.8 11.5 191 285-504 24-245 (546)
37 2wdc_A SOXB, sulfur oxidation 97.8 0.00035 1.2E-08 78.0 16.0 75 407-504 201-291 (562)
38 1su1_A Hypothetical protein YF 97.6 7.8E-05 2.7E-09 72.4 7.3 83 267-372 12-101 (208)
39 1t71_A Phosphatase, conserved 97.5 0.0011 3.6E-08 67.3 14.5 171 287-504 5-188 (281)
40 3c9f_A 5'-nucleotidase; 2',3'- 97.3 0.0035 1.2E-07 69.7 16.5 85 285-373 14-108 (557)
41 2ede_A Netrin receptor DCC; tu 97.1 0.0039 1.3E-07 53.1 11.2 99 167-283 10-111 (114)
42 2dju_A Receptor-type tyrosine- 97.1 0.003 1E-07 52.9 10.2 93 166-281 8-101 (106)
43 1x5l_A Ephrin type-A receptor 97.1 0.0018 6.1E-08 55.0 8.6 96 166-283 11-108 (111)
44 1x4y_A Biregional cell adhesio 97.1 0.0062 2.1E-07 52.2 12.1 42 241-282 69-110 (114)
45 3gve_A YFKN protein; alpha-bet 97.0 0.0075 2.6E-07 62.9 14.0 49 447-504 206-254 (341)
46 1x5x_A Fibronectin type-III do 97.0 0.0023 7.9E-08 54.4 8.3 94 165-280 7-103 (109)
47 1g5b_A Serine/threonine protei 97.0 0.00079 2.7E-08 65.5 5.9 64 287-372 13-79 (221)
48 4h1s_A 5'-nucleotidase; hydrol 97.0 0.015 5.1E-07 64.2 17.0 76 406-504 134-223 (530)
49 1x5z_A Receptor-type tyrosine- 96.9 0.0031 1.1E-07 53.8 8.9 93 166-281 18-110 (115)
50 2ibg_A CG9211-PA, GH03927P; IH 96.9 0.031 1.1E-06 52.8 16.9 133 124-279 65-212 (214)
51 2edd_A Netrin receptor DCC; tu 96.9 0.0033 1.1E-07 55.3 9.0 93 166-280 19-117 (123)
52 2crz_A Fibronectin type-III do 96.9 0.0023 8E-08 54.5 7.7 95 165-281 8-105 (110)
53 1qr4_A Protein (tenascin); fib 96.8 0.031 1.1E-06 51.6 15.7 120 130-280 59-185 (186)
54 2djs_A Ephrin type-B receptor 96.8 0.004 1.4E-07 52.7 8.5 94 165-281 7-103 (108)
55 2edy_A Receptor-type tyrosine- 96.8 0.0016 5.3E-08 54.5 5.5 37 243-279 66-102 (103)
56 1x4x_A Fibronectin type-III do 96.8 0.0048 1.6E-07 52.3 8.7 92 166-281 8-101 (106)
57 1x5f_A Neogenin; RGM binding, 96.7 0.0074 2.5E-07 51.9 9.9 94 166-280 18-114 (120)
58 1x5a_A Ephrin type-A receptor 96.7 0.0059 2E-07 52.1 9.1 41 243-283 64-104 (107)
59 1x5j_A Neogenin; RGM binding, 96.7 0.0027 9.3E-08 54.9 6.7 93 166-280 9-107 (113)
60 2dfj_A Diadenosinetetraphospha 96.7 0.0017 5.9E-08 65.9 5.9 66 287-372 1-69 (280)
61 2e7h_A Ephrin type-B receptor 96.7 0.0075 2.6E-07 51.2 9.1 96 166-282 8-105 (109)
62 2db8_A Tripartite motif protei 96.7 0.0025 8.6E-08 54.7 6.0 94 167-282 8-106 (110)
63 3jyf_A 2',3'-cyclic nucleotide 96.6 0.031 1.1E-06 58.2 15.1 47 447-504 200-247 (339)
64 2crm_A Fibronectin type-III do 96.6 0.0028 9.5E-08 54.9 6.0 95 165-281 17-115 (120)
65 2haz_A N-CAM 1, neural cell ad 96.5 0.004 1.4E-07 52.7 6.3 39 241-279 66-104 (105)
66 3n06_B PRL-R, prolactin recept 96.5 0.039 1.3E-06 52.3 14.1 93 165-279 102-204 (210)
67 2ee2_A Contactin-1; neural cel 96.5 0.012 4.1E-07 50.6 9.4 95 168-282 21-115 (119)
68 1x5g_A Neogenin; RGM binding, 96.5 0.0098 3.3E-07 50.8 8.7 91 166-280 18-110 (116)
69 2dm4_A Sortilin-related recept 96.5 0.015 5.3E-07 49.0 9.7 91 166-279 8-101 (108)
70 2qjc_A Diadenosine tetraphosph 96.4 0.0029 1E-07 63.4 5.6 64 287-372 19-85 (262)
71 2kbg_A N-CAM 2, neural cell ad 96.4 0.0068 2.3E-07 52.8 7.2 83 178-281 19-103 (114)
72 3p4l_A Neogenin; iron homeosta 96.4 0.023 7.8E-07 53.8 11.6 94 168-279 108-204 (211)
73 1va9_A DOWN syndrome cell adhe 96.4 0.018 6.1E-07 49.4 9.9 96 168-280 18-117 (122)
74 2ed7_A Netrin receptor DCC; tu 96.4 0.012 4E-07 50.4 8.5 95 165-280 17-113 (119)
75 2dmk_A Midline 2 isoform 2; mi 96.3 0.0054 1.9E-07 54.0 6.4 102 164-281 14-119 (127)
76 1wfo_A Sidekick 2; FN3, cell a 96.3 0.015 5E-07 50.8 9.1 95 166-280 28-124 (130)
77 1bpv_A Titin, A71, connectin; 96.3 0.014 4.9E-07 50.3 8.6 93 165-278 10-106 (112)
78 1wfu_A Unnamed protein product 96.3 0.0053 1.8E-07 54.1 5.9 40 242-281 76-115 (120)
79 2dle_A Receptor-type tyrosine- 96.3 0.027 9.1E-07 48.1 10.1 91 165-282 7-99 (104)
80 1x4z_A Biregional cell adhesio 96.3 0.013 4.6E-07 50.6 8.4 97 164-280 16-116 (121)
81 1x3d_A Fibronectin type-III do 96.2 0.013 4.6E-07 50.2 8.2 92 165-281 17-113 (118)
82 2ed8_A Netrin receptor DCC; tu 96.2 0.028 9.7E-07 47.1 10.0 91 166-280 8-100 (106)
83 2ed9_A Netrin receptor DCC; tu 96.1 0.015 5E-07 50.3 7.7 89 168-279 31-123 (124)
84 2z72_A Protein-tyrosine-phosph 96.0 0.0069 2.4E-07 63.2 6.3 68 287-372 71-153 (342)
85 1k85_A Chitinase A1; fibronect 96.0 0.032 1.1E-06 45.3 8.8 35 243-277 53-88 (88)
86 2yrz_A Integrin beta-4; GP150, 96.0 0.015 5E-07 49.8 7.0 92 165-279 17-112 (118)
87 2dlh_A Receptor-type tyrosine- 95.9 0.029 9.8E-07 48.0 8.9 40 241-280 76-115 (121)
88 3p4l_A Neogenin; iron homeosta 95.9 0.044 1.5E-06 51.7 10.7 92 167-280 6-103 (211)
89 2ie4_C PP2A-alpha;, serine/thr 95.8 0.0088 3E-07 61.5 5.9 68 287-372 50-121 (309)
90 1x5h_A Neogenin; RGM binding, 95.8 0.023 7.8E-07 49.6 7.8 41 240-280 76-116 (132)
91 2dkm_A Collagen alpha-1(XX) ch 95.8 0.043 1.5E-06 46.2 9.2 92 166-281 9-100 (104)
92 2edx_A Protein tyrosine phosph 95.7 0.03 1E-06 48.8 8.3 41 240-280 78-118 (134)
93 2rb8_A Tenascin; beta sheet,lo 95.7 0.039 1.3E-06 46.5 8.7 93 166-281 3-95 (104)
94 3fl7_A Ephrin receptor; ATP-bi 95.7 0.067 2.3E-06 59.1 12.8 129 128-281 399-535 (536)
95 2jll_A NCAM2, neural cell adhe 95.7 0.15 5.3E-06 52.3 14.9 40 241-281 349-388 (389)
96 1wis_A KIAA1514 protein; FNIII 95.7 0.028 9.5E-07 48.9 7.7 98 165-281 17-120 (124)
97 2vkw_A Neural cell adhesion mo 95.6 0.014 4.8E-07 55.2 6.1 97 165-280 8-107 (209)
98 1fjm_A Protein serine/threonin 95.6 0.012 4.1E-07 61.0 5.9 67 288-372 58-128 (330)
99 3icf_A PPT, serine/threonine-p 95.6 0.018 6.2E-07 59.7 7.0 68 287-372 64-136 (335)
100 2cuh_A Tenascin-X; fibronectin 95.6 0.053 1.8E-06 46.4 9.0 92 165-281 7-98 (115)
101 2e3v_A Neural cell adhesion mo 95.6 0.07 2.4E-06 46.2 9.9 39 242-280 68-106 (122)
102 2dn7_A Receptor-type tyrosine- 95.5 0.051 1.8E-06 45.4 8.7 79 179-279 19-99 (107)
103 3r8q_A Fibronectin; heparin, F 95.5 0.2 6.9E-06 49.5 14.6 103 166-294 113-215 (290)
104 1wf5_A Sidekick 2 protein; FNI 95.5 0.034 1.2E-06 47.6 7.6 93 165-280 17-116 (121)
105 2yuw_A Myosin binding protein 95.5 0.027 9.3E-07 47.6 6.8 84 166-271 8-95 (110)
106 1uem_A KIAA1568 protein; immun 95.4 0.018 6E-07 49.2 5.5 94 165-280 15-112 (117)
107 3f7q_A Integrin beta-4, GP150; 95.4 0.086 3E-06 50.7 10.9 100 165-280 98-200 (234)
108 3h63_A Serine/threonine-protei 95.4 0.019 6.7E-07 59.0 6.4 68 287-372 60-132 (315)
109 2ee3_A Collagen alpha-1(XX) ch 95.3 0.09 3.1E-06 45.0 9.5 91 167-281 9-99 (108)
110 3e0j_A DNA polymerase subunit 95.3 0.19 6.5E-06 54.3 14.0 143 285-443 199-378 (476)
111 3e7a_A PP-1A, serine/threonine 95.3 0.02 6.8E-07 58.5 5.9 67 288-372 57-127 (299)
112 2cum_A Tenascin-X; hexabrachio 95.2 0.11 3.8E-06 43.7 9.8 91 165-280 7-97 (105)
113 1wk0_A KIAA0970 protein; fibro 95.2 0.054 1.9E-06 48.7 8.0 40 241-280 82-121 (137)
114 3f7q_A Integrin beta-4, GP150; 95.1 0.096 3.3E-06 50.4 10.3 90 167-279 7-96 (234)
115 3l5i_A Interleukin-6 receptor 95.1 0.2 6.9E-06 49.4 12.8 38 241-279 253-290 (290)
116 1fnf_A Fibronectin; RGD, extra 95.1 0.23 7.7E-06 50.8 13.6 92 164-277 274-368 (368)
117 2dbj_A Proto-oncogene tyrosine 95.0 0.066 2.3E-06 46.4 7.9 40 242-281 80-119 (124)
118 1ujt_A KIAA1568 protein; fibro 95.0 0.12 4.2E-06 45.1 9.6 41 240-280 74-114 (120)
119 3n1f_C Cell adhesion molecule- 95.0 0.13 4.5E-06 43.1 9.5 91 168-277 7-101 (102)
120 1cd9_B G-CSF-R, protein (G-CSF 95.0 0.25 8.7E-06 46.6 12.7 95 165-279 108-213 (215)
121 3ll8_A Serine/threonine-protei 95.0 0.026 8.8E-07 58.9 5.9 67 288-372 71-141 (357)
122 3b83_A Ten-D3; beta sheet, com 94.9 0.15 5.1E-06 42.4 9.6 74 166-261 2-75 (100)
123 1x5y_A Myosin binding protein 94.9 0.067 2.3E-06 45.2 7.4 85 165-270 8-95 (111)
124 2ic2_A CG9211-PA, GH03927P; IH 94.8 0.15 5.1E-06 43.9 9.7 82 168-262 5-92 (115)
125 2cui_A Tenascin-X; fibronectin 94.8 0.18 6.2E-06 43.4 10.0 96 168-281 11-109 (112)
126 3lpw_A A77-A78 domain from tit 94.7 0.086 2.9E-06 48.5 8.5 75 165-262 102-179 (197)
127 2gee_A Hypothetical protein; f 94.7 0.19 6.5E-06 47.2 11.0 103 168-294 25-127 (203)
128 1uen_A KIAA0343 protein; immun 94.7 0.063 2.1E-06 46.1 7.0 40 241-280 80-119 (125)
129 2gee_A Hypothetical protein; f 94.7 0.21 7.2E-06 46.9 11.2 73 168-261 116-188 (203)
130 3mtr_A N-CAM-1, NCAM-1, neural 94.7 0.15 5.1E-06 48.0 10.1 42 241-282 173-214 (215)
131 1bqu_A Protein (GP130); cytoki 94.7 0.1 3.4E-06 49.3 8.9 98 165-280 103-206 (215)
132 2vkw_A Neural cell adhesion mo 94.6 0.19 6.5E-06 47.1 10.7 90 166-277 110-201 (209)
133 1uey_A KIAA0343 protein; immun 94.6 0.052 1.8E-06 47.1 6.1 37 244-280 77-114 (127)
134 2d9q_B Granulocyte colony-stim 94.5 0.24 8.3E-06 49.8 11.9 133 125-280 158-308 (313)
135 1tdq_A Tenascin-R; extracellul 94.5 0.51 1.7E-05 46.2 14.0 105 165-294 104-210 (283)
136 1qr4_A Protein (tenascin); fib 94.5 0.18 6.1E-06 46.4 9.9 90 165-281 6-97 (186)
137 1wfn_A Sidekick 2; FN3, cell a 94.5 0.17 5.9E-06 43.0 9.2 88 165-273 17-106 (119)
138 1aui_A Calcineurin, serine/thr 94.5 0.038 1.3E-06 60.2 5.8 67 288-372 84-154 (521)
139 1wao_1 Serine/threonine protei 94.4 0.047 1.6E-06 59.2 6.7 68 287-372 213-285 (477)
140 3teu_A Fibcon; FN3 domain, fib 94.4 0.11 3.9E-06 42.7 7.7 88 168-280 4-91 (98)
141 1uc6_A CNTF receptor, ciliary 94.4 0.12 4.2E-06 43.7 7.9 91 163-276 5-104 (109)
142 3lpw_A A77-A78 domain from tit 94.4 0.12 4.2E-06 47.4 8.5 108 165-294 5-116 (197)
143 3mpc_A FN3-like protein; fibro 94.3 0.13 4.5E-06 43.6 7.9 89 165-277 4-93 (103)
144 1j8k_A Fibronectin; EDA, TYPEI 94.3 0.18 6E-06 41.2 8.4 73 168-262 4-76 (94)
145 2yux_A Myosin-binding protein 94.3 0.055 1.9E-06 46.6 5.5 76 165-262 17-95 (120)
146 1axi_B HGHBP, growth hormone r 94.3 0.2 7E-06 48.8 10.3 93 164-278 129-234 (236)
147 1cfb_A Drosophila neuroglian; 94.2 0.11 3.7E-06 48.7 7.9 94 165-280 5-102 (205)
148 3r8q_A Fibronectin; heparin, F 94.0 0.22 7.5E-06 49.3 10.2 106 166-294 21-126 (290)
149 1v5j_A KIAA1355 protein, RSGI 94.0 0.097 3.3E-06 44.9 6.4 92 167-280 9-102 (108)
150 2b5i_B Interleukin-2 receptor 94.0 0.29 1E-05 47.0 10.6 95 166-280 106-208 (214)
151 3v6o_A Leptin receptor; recept 93.7 0.27 9.2E-06 46.7 9.7 88 164-271 108-197 (206)
152 1i1r_A GP130, interleukin-6 re 93.6 0.19 6.6E-06 50.3 8.9 97 165-279 199-301 (303)
153 2qbw_A PDZ-fibronectin fusion 93.5 0.13 4.4E-06 48.5 7.0 89 167-277 105-193 (195)
154 3up1_A Interleukin-7 receptor 93.5 0.23 8E-06 48.3 9.0 96 164-280 111-215 (223)
155 1fnf_A Fibronectin; RGD, extra 93.5 0.22 7.6E-06 50.9 9.4 93 166-280 2-94 (368)
156 1zlg_A Anosmin 1; insulin-like 93.0 2.4 8.3E-05 47.8 17.8 42 239-280 332-376 (680)
157 1oww_A FN, fibronectin first t 93.0 0.8 2.7E-05 37.9 9.7 83 169-277 8-96 (98)
158 2ha1_A Fibronectin; beta sandw 92.9 0.4 1.4E-05 44.6 9.4 89 168-278 2-92 (201)
159 1eer_B Epobp, erythropoietin r 92.9 0.27 9.3E-06 47.3 8.4 94 165-278 121-222 (227)
160 3k2m_C Monobody HA4; engineere 92.8 0.39 1.3E-05 40.0 8.1 75 167-262 6-81 (101)
161 2ibg_A CG9211-PA, GH03927P; IH 92.7 0.39 1.3E-05 45.0 9.1 94 166-270 2-99 (214)
162 2ocf_D Fibronectin; estrogen r 92.5 0.32 1.1E-05 42.2 7.6 74 166-261 29-102 (121)
163 1n26_A IL-6 receptor alpha cha 92.5 0.54 1.9E-05 47.6 10.4 92 165-277 196-295 (325)
164 2w1n_A O-GLCNACASE NAGJ; hexos 92.4 0.45 1.6E-05 45.9 8.8 35 244-278 203-237 (238)
165 3tes_A Tencon; fibronectin typ 92.4 0.4 1.4E-05 39.8 7.6 71 169-261 5-75 (98)
166 1tdq_A Tenascin-R; extracellul 92.2 0.63 2.2E-05 45.5 10.3 105 165-294 14-118 (283)
167 1x5i_A Neogenin; RGM binding, 92.2 0.53 1.8E-05 40.8 8.6 40 240-280 80-119 (126)
168 3qwq_B Adnectin; cell surface 91.9 0.42 1.4E-05 41.0 7.5 74 166-261 4-77 (114)
169 3tgx_A Interleukin-21 receptor 91.6 0.7 2.4E-05 44.4 9.5 98 165-281 100-210 (219)
170 3t04_D Monobody 7C12; engineer 91.5 0.49 1.7E-05 39.5 7.2 75 166-261 8-84 (103)
171 3qht_C Monobody YSMB-1; fibron 91.4 0.23 8E-06 40.9 5.1 74 166-261 5-78 (97)
172 2ekj_A Collagen alpha-1(XX) ch 91.3 0.11 3.8E-06 43.6 3.0 76 165-262 7-82 (105)
173 2q7n_A Leukemia inhibitory fac 91.2 0.58 2E-05 51.0 9.4 132 125-280 345-487 (488)
174 3l5h_A Interleukin-6 receptor 90.9 0.33 1.1E-05 53.3 7.1 98 165-280 198-301 (589)
175 2lfe_A E3 ubiquitin-protein li 90.9 1.1 3.6E-05 39.0 8.5 99 41-166 31-138 (138)
176 3t1w_A Four-domain fibronectin 90.8 0.75 2.6E-05 47.1 9.4 89 167-278 4-93 (375)
177 3e0g_A Leukemia inhibitory fac 90.6 0.81 2.8E-05 49.8 9.7 134 126-280 341-482 (483)
178 2jll_A NCAM2, neural cell adhe 89.7 6.3 0.00022 39.9 15.4 93 165-280 195-291 (389)
179 1cfb_A Drosophila neuroglian; 89.4 0.94 3.2E-05 42.1 8.1 38 241-278 164-202 (205)
180 3csg_A MBP, maltose-binding pr 89.0 0.61 2.1E-05 49.9 7.2 74 167-261 371-444 (461)
181 3t1w_A Four-domain fibronectin 88.8 3.2 0.00011 42.2 12.3 93 166-280 187-279 (375)
182 2edb_A Netrin receptor DCC; tu 88.0 1.2 4E-05 37.9 7.1 74 165-262 17-92 (116)
183 3l5i_A Interleukin-6 receptor 87.6 11 0.00039 36.4 15.0 65 180-262 114-178 (290)
184 1wj3_A KIAA1496 protein; beta 86.9 1.2 4.1E-05 38.0 6.5 37 242-279 74-110 (117)
185 2v5y_A Receptor-type tyrosine- 86.6 4.5 0.00015 45.7 12.9 95 167-279 361-459 (731)
186 1zlg_A Anosmin 1; insulin-like 85.4 3 0.0001 47.1 10.5 36 242-277 224-260 (680)
187 2b5i_C Cytokine receptor commo 85.4 1.7 5.9E-05 40.7 7.2 91 165-278 98-194 (199)
188 3bpo_C Interleukin-13 receptor 85.0 2.2 7.6E-05 42.7 8.3 105 165-279 199-312 (314)
189 2erj_C Cytokine receptor commo 84.7 2.4 8.1E-05 41.6 8.1 93 165-280 136-234 (247)
190 2h41_A Fibronectin; beta sandw 84.3 0.65 2.2E-05 38.7 3.2 62 179-261 18-79 (95)
191 2gys_A Cytokine receptor commo 84.1 6.5 0.00022 41.1 11.9 96 165-281 108-217 (419)
192 1q38_A Fibronectin; amyloid fi 84.0 0.53 1.8E-05 37.8 2.3 41 237-278 34-74 (89)
193 1iar_B Protein (interleukin-4 82.3 2.1 7.3E-05 40.4 6.5 98 164-280 96-201 (207)
194 3lqm_A Interleukin-10 receptor 82.2 3.2 0.00011 38.9 7.7 39 242-280 156-196 (201)
195 2dtg_E Insulin receptor; IR ec 81.7 2.3 7.9E-05 49.7 7.8 40 241-280 549-593 (897)
196 2v5y_A Receptor-type tyrosine- 81.2 11 0.00036 42.6 12.9 40 241-280 316-357 (731)
197 3uto_A Twitchin; kinase, muscl 80.5 2.3 7.8E-05 47.1 6.8 75 165-262 9-86 (573)
198 3se4_A Interferon alpha/beta r 80.5 15 0.00052 38.2 13.0 38 242-279 164-203 (414)
199 3fl7_A Ephrin receptor; ATP-bi 80.4 5.4 0.00018 43.8 9.7 42 240-281 399-443 (536)
200 4go6_B HCF C-terminal chain 1; 79.2 2 6.7E-05 41.3 5.1 38 242-279 47-84 (232)
201 3s98_A Interferon alpha/beta r 79.2 10 0.00034 38.0 10.7 39 241-279 159-199 (306)
202 4go6_B HCF C-terminal chain 1; 77.9 20 0.00067 34.1 11.9 35 245-279 167-201 (232)
203 2gys_A Cytokine receptor commo 76.2 9.9 0.00034 39.7 10.0 37 241-277 377-418 (419)
204 2ha1_A Fibronectin; beta sandw 74.5 5.8 0.0002 36.4 6.8 23 240-262 164-186 (201)
205 3l5h_A Interleukin-6 receptor 71.5 1.4 4.7E-05 48.2 1.9 37 241-278 552-588 (589)
206 1bqu_A Protein (GP130); cytoki 70.6 6.7 0.00023 36.3 6.3 36 241-277 62-98 (215)
207 2dtg_E Insulin receptor; IR ec 69.2 1.6 5.5E-05 51.1 1.8 39 243-282 853-891 (897)
208 4doh_R Interleukin-20 receptor 66.9 7.1 0.00024 37.3 5.7 40 241-280 173-214 (221)
209 2nzi_A Titin; IG-domain, FNIII 65.2 7.8 0.00027 37.7 5.8 30 242-271 255-284 (305)
210 1su1_A Hypothetical protein YF 63.5 17 0.00059 34.1 7.6 63 491-590 143-205 (208)
211 3lb6_C IL-13, interleukin-13 r 59.5 3.3 0.00011 43.1 1.8 39 243-281 292-337 (380)
212 2uvf_A Exopolygalacturonase; G 56.2 16 0.00055 40.7 6.8 54 239-298 111-165 (608)
213 1i1r_A GP130, interleukin-6 re 52.9 18 0.00062 35.4 6.0 75 165-261 103-179 (303)
214 1cd9_B G-CSF-R, protein (G-CSF 51.6 82 0.0028 28.6 10.2 38 239-277 66-103 (215)
215 3flo_A DNA polymerase alpha su 51.2 28 0.00097 37.2 7.4 78 285-372 146-247 (460)
216 3n06_B PRL-R, prolactin recept 50.1 78 0.0027 28.8 9.7 93 166-277 4-97 (210)
217 1g5b_A Serine/threonine protei 46.1 8.5 0.00029 36.5 2.2 16 489-504 176-191 (221)
218 3d85_D IL-12B, interleukin-12 43.7 45 0.0015 33.2 7.3 84 164-272 211-300 (306)
219 4doh_B Interleukin-20 receptor 39.7 15 0.00052 34.5 2.8 81 177-279 118-200 (206)
220 4a2l_A BT_4663, two-component 37.4 78 0.0027 35.7 8.9 44 234-280 737-783 (795)
221 3b4n_A Endo-pectate lyase; pec 37.2 60 0.0021 33.0 6.8 21 245-265 75-95 (344)
222 3se4_A Interferon alpha/beta r 33.3 2.5E+02 0.0085 28.6 11.3 36 244-279 270-306 (414)
223 3lb6_C IL-13, interleukin-13 r 31.2 3E+02 0.01 27.9 11.5 28 165-192 31-58 (380)
224 2d9q_B Granulocyte colony-stim 29.1 3.9E+02 0.013 25.6 13.8 100 165-278 98-198 (313)
225 1noa_A Neocarzinostatin; antib 23.7 73 0.0025 27.1 4.0 35 44-81 2-36 (113)
226 3qt2_A Interleukin-5 receptor 21.1 2.1E+02 0.0071 28.6 7.7 73 164-262 219-294 (317)
227 2mcm_A Macromomycin; apoprotei 20.9 84 0.0029 26.7 3.8 35 44-81 1-35 (112)
228 3ott_A Two-component system se 20.4 2.1E+02 0.0071 31.9 8.3 37 240-279 709-748 (758)
No 1
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=100.00 E-value=1.6e-61 Score=527.12 Aligned_cols=386 Identities=25% Similarity=0.397 Sum_probs=308.7
Q ss_pred CCCCCCcceeeecCC-CCcEEEEEEeC-CCCCCCccEEEEccCCCCCccccCcc-eEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKV-WNEMTVTWTSG-YGINEAEPFVEWGPKGGDRTYSPAGT-LTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~-~~~m~V~W~T~-~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
++++|.|+||+++++ .++|+|+|+|. .. ++.+.|+|+++++.....+.++ .+|... -..++++|
T Consensus 21 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~ 87 (426)
T 1xzw_A 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDK--AGANKVFYWSENSKSQKRAMGTVVTYKYY-----------NYTSAFIH 87 (426)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCC--TTTTEEEEEETTCCCCEEEECEEECCEET-----------TEECCEEE
T ss_pred CCCCCceEEEEECCCCCCeEEEEEEeCCCC--CCCCEEEEecCCCCCceEEEEEEEEEEec-----------CCcCCEEE
Confidence 567899999999988 49999999998 43 4678999998766544333322 234321 02468999
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHH
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLI 321 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~ 321 (612)
+|+|+||+|||+|+|||+++ .||+.++|+|+|.++....+||+++||+|... ....+++++.
T Consensus 88 ~v~l~gL~p~t~Y~Yrv~~g------~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~------------~~~~~l~~i~ 149 (426)
T 1xzw_A 88 HCTIKDLEYDTKYYYRLGFG------DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTH------------DSNTTLTHYE 149 (426)
T ss_dssp EEEECCCCTTCEEEEEECCG------GGCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHH
T ss_pred EEEECCCCCCCEEEEEECCC------CccceeEEECCCCCCCCCCeEEEEEEeCCCCC------------chHHHHHHHH
Confidence 99999999999999999862 47999999999988777789999999998642 1245677776
Q ss_pred HhcCCCCEEEEcCccccCCCc----ccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccccccc
Q 007227 322 QDLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMF 397 (612)
Q Consensus 322 ~~~~~pdfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f 397 (612)
++..+||||||+||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... . ...+....+..+|
T Consensus 150 ~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f 222 (426)
T 1xzw_A 150 QNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPD---I----GEYQPFVPFTNRY 222 (426)
T ss_dssp HCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGG---G----TBCSTTHHHHHHS
T ss_pred hCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCc---c----ccccCChhheEEE
Confidence 643489999999999998765 4679999999999888999999999999864210 0 0011224567788
Q ss_pred ccCCC---CCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCc
Q 007227 398 YVPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSF 474 (612)
Q Consensus 398 ~~P~~---~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~ 474 (612)
.||.+ ...+.||+|++|+++||+|||+.++..+.+|++||+++|++++|++++|+||++|+|+ |++..++..++
T Consensus 223 ~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~-~~~~~~~~~~~-- 299 (426)
T 1xzw_A 223 PTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPL-YNSYEAHYMEG-- 299 (426)
T ss_dssp CCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT--
T ss_pred eCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCc-eeCCCcccCCC--
Confidence 88853 2357899999999999999999887778999999999999987778999999999999 87654332222
Q ss_pred cchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceecc--CCCccccCCCCCeEEEEECCCCCCCC---CCCCCCC
Q 007227 475 AEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTN--KEKHYYKGSLNGTIHIAAGGAGASLS---PFTTLQT 549 (612)
Q Consensus 475 ~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~--~~~~~y~~~~~g~vyiv~G~gG~~l~---~~~~~~~ 549 (612)
+.+ |+.|+++|.+++||++|+||+|.|||++|++++++.. +....| .+.+|++||++|+||+... .+..++|
T Consensus 300 -~~~-r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~-~~~~g~~yi~~G~gG~~~~~~~~~~~~~p 376 (426)
T 1xzw_A 300 -EAM-RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPV-SDESAPVYITIGDGGNSEGLASEMTQPQP 376 (426)
T ss_dssp -HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCE-ECTTSCEEEEECCSCCTTCCCCCBCSSCC
T ss_pred -HHH-HHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccc-cCCCccEEEEeCCCccccccccccCCCCC
Confidence 345 8999999999999999999999999999998876421 111122 2468999999999998642 4555788
Q ss_pred CceeeeeCCceEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEecC
Q 007227 550 TWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGK--VYDSFRISRDY 594 (612)
Q Consensus 550 ~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~--v~D~f~i~k~~ 594 (612)
+|++++...|||++|++.|+++|.++|+++.||+ |+|+|||.|++
T Consensus 377 ~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 377 SYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp TTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred CceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 9999999999999999999999999999999998 89999999975
No 2
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=100.00 E-value=1.1e-60 Score=520.25 Aligned_cols=389 Identities=25% Similarity=0.387 Sum_probs=305.3
Q ss_pred CCCCCCcceeeecCC-CCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcc-eEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKV-WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGT-LTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~-~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
++++|.|+||+++++ .++|+|+|+|... ++.+.|+||++++....++.++ .+|...+ ..++++|+
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~~ 81 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDE--PGSSAVRYWSEKNGRKRIAKGKMSTYRFFN-----------YSSGFIHH 81 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSS--CCCCCEEEEESSSCCCEEECCEEECCBCSS-----------CBCCEEEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCC--CCCCEEEEEeCCCCCceEEEEEEEEEEecC-----------CCCCEEEE
Confidence 567899999999987 5999999999753 4678999998776554444333 3343210 24689999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHH
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ 322 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~ 322 (612)
|+|+||+|||+|+|||+.+ .||+.++|+|+|.++....+||+++||+|... ....+++++.+
T Consensus 82 v~l~gL~p~t~Y~Yrv~~~------~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~------------~~~~~l~~~~~ 143 (424)
T 2qfp_A 82 TTIRKLKYNTKYYYEVGLR------NTTRRFSFITPPQTGLDVPYTFGLIGDLGQSF------------DSNTTLSHYEL 143 (424)
T ss_dssp EEECSCCTTCEEEEEECCS------SSCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHHT
T ss_pred EEECCCCCCCEEEEEECCC------CccceEEEECCCCCCCCCCeEEEEEEeCCCCC------------ChHHHHHHHHh
Confidence 9999999999999999863 37899999999988777789999999998642 12345666655
Q ss_pred hcCCCCEEEEcCccccCCCc----ccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccc
Q 007227 323 DLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFY 398 (612)
Q Consensus 323 ~~~~pdfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~ 398 (612)
+..++|||||+||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... .. .......+..+|.
T Consensus 144 ~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~---~~----~~~~~~~~~~~f~ 216 (424)
T 2qfp_A 144 SPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE---IN----ETEPFKPFSYRYH 216 (424)
T ss_dssp CSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGG---GT----BCSTTHHHHHHCC
T ss_pred CCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCc---cc----ccccchhhhhhcc
Confidence 33489999999999998753 3579999999998888999999999999864210 00 0001134566788
Q ss_pred cCCC---CCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCcc
Q 007227 399 VPTE---NRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFA 475 (612)
Q Consensus 399 ~P~~---~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~ 475 (612)
||.. ...+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+||++|+|+ |++...+..++
T Consensus 217 ~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~-~~~~~~~~~~~--- 292 (424)
T 2qfp_A 217 VPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPL-YNSYNHHFMEG--- 292 (424)
T ss_dssp CCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT---
T ss_pred CCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCc-eecCccccccc---
Confidence 8853 3457899999999999999999877667899999999999987777899999999999 77643221121
Q ss_pred chhhHHHHHHHHHhCCCeEEEecccccceeeecccCceecc--CCCccccCCCCCeEEEEECCCCCCCC---CCCCCCCC
Q 007227 476 EPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTN--KEKHYYKGSLNGTIHIAAGGAGASLS---PFTTLQTT 550 (612)
Q Consensus 476 ~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~--~~~~~y~~~~~g~vyiv~G~gG~~l~---~~~~~~~~ 550 (612)
..+ |+.|+++|.+++||++|+||+|.|+|++|+++..... .....+ .++++++||++|+||+... .+..++|+
T Consensus 293 ~~~-r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~-~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~ 370 (424)
T 2qfp_A 293 EAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPV-KDQSAPVYITIGDAGNYGVIDSNMIQPQPE 370 (424)
T ss_dssp HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCE-ECTTSCEEEEECCSCTTSCCCCCBCSSCCT
T ss_pred HHH-HHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccc-cCCCCcEEEEecCCCCccccCccCCCCCCC
Confidence 345 8899999999999999999999999999997654321 111112 2467999999999998642 35557889
Q ss_pred ceeeeeCCceEEEEEEecCCeEEEEEEECCCCcE--EEEEEEEecCCCc
Q 007227 551 WSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKV--YDSFRISRDYRDI 597 (612)
Q Consensus 551 ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v--~D~f~i~k~~~~~ 597 (612)
|++++...|||++|++.|+++|.++|+++.||++ .|+|+|.|++..-
T Consensus 371 ~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~~~~ 419 (424)
T 2qfp_A 371 YSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYP 419 (424)
T ss_dssp TEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTTTCC
T ss_pred cceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEeccccc
Confidence 9999999999999999999999999999999997 5999999986554
No 3
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=1.2e-34 Score=322.70 Aligned_cols=377 Identities=17% Similarity=0.221 Sum_probs=235.2
Q ss_pred CCcceeeecCC-CCcEEEEEEeCCCCC-------CCccEEEEccCCCCCc--cccCcceEEeccccCCCCCccccccCCC
Q 007227 169 PVYPRLAQGKV-WNEMTVTWTSGYGIN-------EAEPFVEWGPKGGDRT--YSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (612)
Q Consensus 169 P~~~~La~~~~-~~~m~V~W~T~~~~~-------~~~~~V~yg~~~~~~~--~~~~~~~t~~~~~mc~~pa~~~g~~~~g 238 (612)
|...-++.|+. .+++ |.|+.-.+.. .....|+|....+..+ ....++.. .. .+.+
T Consensus 8 ~f~~GvasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~-a~-------------~~~~ 72 (527)
T 2yeq_A 8 PFTLGVASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEM-AK-------------PSLA 72 (527)
T ss_dssp SCTTCEEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEE-EC-------------GGGT
T ss_pred CccccccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEE-ec-------------CCCc
Confidence 44455667765 4555 7798863210 1234676765433322 22222221 10 1246
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCC-CceEEEEEecCCCCCCCCCCcccccccChHHHH
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQD-SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTT 317 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~-~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~ 317 (612)
++|+|.|+||+|||+|+|||+.. ..+|++++|+|+|.++.. ..+||+++||.+... +..+.+
T Consensus 73 ~t~~v~v~gL~P~t~Y~Yr~~~~-----~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~------------g~~~~~ 135 (527)
T 2yeq_A 73 HSVHVEADGLEPNKVYYYRFKTG-----HELSPVGKTKTLPAPGANVPQMTFAFASCQQYEH------------GYYTAY 135 (527)
T ss_dssp TEEEEEECSCCTTCEEEEEEEET-----TEECCCEEEECCCCTTCCCCCEEEEEECCCCGGG------------CCCHHH
T ss_pred eEEEeecCCcCCCCEEEEEEEeC-----CCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCC------------CccHHH
Confidence 89999999999999999999874 246899999999987653 579999999997531 112456
Q ss_pred HHHHHhcCCCCEEEEcCccccCCCcc------------------------cHHHHHH--HhhhccccCCCeEEccCCCcc
Q 007227 318 RQLIQDLKNIDIVFHIGDICYANGYI------------------------SQWDQFT--AQIEPIASTVPYMIASGNHER 371 (612)
Q Consensus 318 ~~l~~~~~~pdfvl~~GDi~Y~~g~~------------------------~~wd~f~--~~i~~l~~~vP~~~~~GNHD~ 371 (612)
..|.+ .++|||||+||++|+++.. ..|.+++ ..++.+.+.+|+|+++||||+
T Consensus 136 ~~ia~--~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~ 213 (527)
T 2yeq_A 136 KHMAK--EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEV 213 (527)
T ss_dssp HHHTT--SCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTT
T ss_pred HHHHh--cCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccc
Confidence 66665 6899999999999987532 1122222 235677788999999999999
Q ss_pred CCCCCCCCCCCCCCCCcc----cccccccc-ccCCC-------CCCceEEEEEeCC-EEEEEEcCCCCCC----------
Q 007227 372 DWPGTGSFYGNMDSGGEC----GVLVENMF-YVPTE-------NRAKFWYSTDYGM-FRFCIADTEQDWR---------- 428 (612)
Q Consensus 372 ~~~~~~~~y~~~dsgge~----g~~~~~~f-~~P~~-------~~~~~yYsfd~G~-v~Fi~LDT~~~~~---------- 428 (612)
..+..+.........+.. ...++.+| .||.. ...+.||+|++|+ ++||+|||+....
T Consensus 214 ~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~ 293 (527)
T 2yeq_A 214 ENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKP 293 (527)
T ss_dssp STTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEEC
T ss_pred cCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEecccccccccccccccc
Confidence 743211100000000000 01122333 35532 2357899999999 9999999976321
Q ss_pred ------------CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCcc------CCCCccchhhHHHHHHHHHhC
Q 007227 429 ------------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYA------VEGSFAEPMGRESLQKLWQKY 490 (612)
Q Consensus 429 ------------~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~------~~~~~~~~~~r~~l~~ll~k~ 490 (612)
.+.+|++||+++|++ ++++|+||+.|+|+ +......+ .+..-.-...|+.|+++|.++
T Consensus 294 ~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~-~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~ 369 (527)
T 2yeq_A 294 PSDESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFF-AKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSK 369 (527)
T ss_dssp CCHHHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCC-SCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHT
T ss_pred ccccccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcc-cccccCCCcccccCccchhccHHHHHHHHHHHHHh
Confidence 368999999999998 67899999999999 66532111 111000122389999999999
Q ss_pred CCe--EEEecccccceeeecccCceeccCCCccccCCCC----CeEEEEECC--CCC--CCCCC----CCCCCCceeeee
Q 007227 491 KVD--IAVFGHVHNYERICPIYQNICTNKEKHYYKGSLN----GTIHIAAGG--AGA--SLSPF----TTLQTTWSLYRD 556 (612)
Q Consensus 491 ~Vd--lvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~----g~vyiv~G~--gG~--~l~~~----~~~~~~ws~~~~ 556 (612)
+|+ ++|+||+|.+++.....+.. ++. ++-+++++. +|. .+... ...+| +..|.+
T Consensus 370 ~v~n~vvLsGDvH~~~~~~~~~~~~-----------~p~~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np-~~~~~~ 437 (527)
T 2yeq_A 370 NLNNVVVLTGDVHASWASNLHVDFE-----------KTSSKIFGAEFVGTSITSGGNGADKRADTDQILKENP-HIQFFN 437 (527)
T ss_dssp TCCCEEEEECSSSSEEEEEEESSTT-----------CTTSCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCT-TEEEEE
T ss_pred CCCCEEEEEcchHHHhHhhcccccc-----------CCCCCceEEEEEcCCeeCCCCcccchhhhhhhhhcCC-cceeee
Confidence 995 99999999999986321110 111 333332221 221 11100 01122 334555
Q ss_pred CCceEEEEEEecCCeEEEEEEE-----CCCCc--EEEEEEEEecCCC
Q 007227 557 YDHGFVKLTAFDHSNLLFEYKK-----SRDGK--VYDSFRISRDYRD 596 (612)
Q Consensus 557 ~~~Gy~~l~v~n~~~L~~~~~~-----~~dG~--v~D~f~i~k~~~~ 596 (612)
...||.+|++ +++.++++|+. +.++. ..-+|++....+-
T Consensus 438 ~~~Gy~~v~v-t~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~g~~~ 483 (527)
T 2yeq_A 438 DYRGYVRCTV-TPHQWKADYRVMPFVTEPGAAISTRASFVYQKDQTG 483 (527)
T ss_dssp BCEEEEEEEE-ETTEEEEEEEEESCSSSSCCCCEEEEEEEECSSTTC
T ss_pred CCCCEEEEEE-eccEEEEEEEEeCCccCCCCcceeeeEEEEeCCCcC
Confidence 7899999999 78999999885 22333 4455666554443
No 4
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.1e-34 Score=305.71 Aligned_cols=264 Identities=18% Similarity=0.264 Sum_probs=187.1
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCc----ccHHHHHHHh-hhcc--cc
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQ-IEPI--AS 358 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~----~~~wd~f~~~-i~~l--~~ 358 (612)
.+||+++||+|.+.. .|......+.+++++ .+|||||++||++|. |. ..+|.+.++. ++.. ..
T Consensus 3 ~l~f~~igD~g~g~~--------~q~~va~~m~~~~~~-~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~ 72 (342)
T 3tgh_A 3 QLRFASLGDWGKDTK--------GQILNAKYFKQFIKN-ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDM 72 (342)
T ss_dssp CEEEEECCSCBSCCH--------HHHHHHHHHHHHHHH-TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTT
T ss_pred eEEEEEEecCCCCCc--------hHHHHHHHHHHHHhh-cCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhh
Confidence 489999999997531 232233445555544 789999999999998 54 4556554443 3332 35
Q ss_pred CCCeEEccCCCccCCCCCC------CCCCCCCC----CCccccccccccccCCCCCCceEEEE----Ee---------C-
Q 007227 359 TVPYMIASGNHERDWPGTG------SFYGNMDS----GGECGVLVENMFYVPTENRAKFWYST----DY---------G- 414 (612)
Q Consensus 359 ~vP~~~~~GNHD~~~~~~~------~~y~~~ds----gge~g~~~~~~f~~P~~~~~~~yYsf----d~---------G- 414 (612)
.+|+++++||||+..+... ..|...+. -.........||.||. .||+| +. |
T Consensus 73 ~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~-----~yY~~~~~f~~~~~~~~~~~g~ 147 (342)
T 3tgh_A 73 YMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN-----YWYHYFTHFTVSSGPSIVKTGH 147 (342)
T ss_dssp CSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS-----SSEEEEEEEEEC---------C
T ss_pred CCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc-----ceEEEEEEeeccccccccccCC
Confidence 7999999999998642100 00100000 0000122346788884 36654 32 3
Q ss_pred ---CEEEEEEcCCCCCC----------CCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHH
Q 007227 415 ---MFRFCIADTEQDWR----------EGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRE 481 (612)
Q Consensus 415 ---~v~Fi~LDT~~~~~----------~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~ 481 (612)
.++||+|||..... ...+|++||+++|+. ++|+||++|+|+ |+++.. +. ...+ ++
T Consensus 148 ~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~-~~~~~~-~~----~~~l-~~ 215 (342)
T 3tgh_A 148 KDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPI-YSSGYS-RG----SSYL-AY 215 (342)
T ss_dssp EEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCS-SCSSTT-CC----CHHH-HH
T ss_pred CCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCC-CCCCCC-CC----cHHH-HH
Confidence 39999999974321 125899999999943 479999999999 877532 11 1234 88
Q ss_pred HHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceE
Q 007227 482 SLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGF 561 (612)
Q Consensus 482 ~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy 561 (612)
.|++||.+|+||++|+||+|.|+|.++ +|++||++|+||...... ...++|+.++...+||
T Consensus 216 ~l~~ll~~~~VdlvlsGH~H~~~~~~~------------------~g~~~iv~Ga~g~~~~~~-~~~~~~s~f~~~~~Gf 276 (342)
T 3tgh_A 216 YLLPLLKDAEVDLYISGHDNNMEVIED------------------NDMAHITCGSGSMSQGKS-GMKNSKSLFFSSDIGF 276 (342)
T ss_dssp HTHHHHHHTTCCEEEECSSSSEEEEEE------------------TTEEEEEECCSSCCCCCC-SSCCTTEEEEECSSEE
T ss_pred HHHHHHHHcCCCEEEECCCcceeEEee------------------CCcEEEEeCccccccccC-CCCCCcceeecCCCcE
Confidence 999999999999999999999999963 468999999988765322 1346799999999999
Q ss_pred EEEEEecCCeEEEEEEECCCCcEEEEEEEEecCCC
Q 007227 562 VKLTAFDHSNLLFEYKKSRDGKVYDSFRISRDYRD 596 (612)
Q Consensus 562 ~~l~v~n~~~L~~~~~~~~dG~v~D~f~i~k~~~~ 596 (612)
.++++ +++.|+++|+.+.+|+++|+|+|.|+.+-
T Consensus 277 ~~l~v-~~~~l~~~~~~~~~G~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 277 CVHEL-SNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310 (342)
T ss_dssp EEEEE-ETTEEEEEEEETTTTEEEEEEEEECCCCS
T ss_pred EEEEE-ECCEEEEEEEECCCCcEEEEEEEECCCCc
Confidence 99999 78899999996699999999999997663
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.97 E-value=4.1e-30 Score=265.34 Aligned_cols=264 Identities=17% Similarity=0.246 Sum_probs=176.1
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHH-HHHHhhhccc----c-C
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIA----S-T 359 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~----~-~ 359 (612)
.+||+++||+|......... ..+....+.+.+++++ .+|||||++||++|.+|....++ +|.+.++.+. . .
T Consensus 6 ~~~~~~isD~h~~~~~~~~~--~~~~~~~~~l~~~~~~-~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 82 (313)
T 1ute_A 6 ILRFVAVGDWGGVPNAPFHT--AREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRN 82 (313)
T ss_dssp CEEEEEECSCCCCSSTTSSC--HHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGTT
T ss_pred ceEEEEEcccCCCCCccccC--chHHHHHHHHHHHHHh-cCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhcC
Confidence 49999999999865321000 0011122334444443 58999999999998765432221 3334433322 2 7
Q ss_pred CCeEEccCCCccCCCCCCC-CCCCCCCCCccccccccccccCCCCCCceEEEEEe------CCEEEEEEcCCCC------
Q 007227 360 VPYMIASGNHERDWPGTGS-FYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY------GMFRFCIADTEQD------ 426 (612)
Q Consensus 360 vP~~~~~GNHD~~~~~~~~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~------G~v~Fi~LDT~~~------ 426 (612)
+|+++++||||........ -| .....+|.+| ..||++++ |+++||+||+...
T Consensus 83 ~p~~~v~GNHD~~~~~~~~~~~----------~~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~~ 147 (313)
T 1ute_A 83 VPWHVLAGNHDHLGNVSAQIAY----------SKISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSDD 147 (313)
T ss_dssp CCEEECCCHHHHHSCHHHHHHG----------GGTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHCCGGG
T ss_pred CCEEEECCCCccCCCccccccc----------cccCCCccCc-----ccceEEEEecCCCCceEEEEEEEChHHhCcCcc
Confidence 9999999999985311000 00 0012344454 34788888 5899999998641
Q ss_pred -----------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEE
Q 007227 427 -----------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIA 495 (612)
Q Consensus 427 -----------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdlv 495 (612)
...+.+|++||+++|++. +.+|+|+++|+|+ ++.... + . ...+ ++.|.++|.+++|+++
T Consensus 148 ~~~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~-~~~~~~-~---~-~~~~-~~~l~~~l~~~~v~~~ 217 (313)
T 1ute_A 148 FVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPV-WSIAEH-G---P-THCL-VKQLLPLLTTHKVTAY 217 (313)
T ss_dssp STTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCS-SCCSSS-C---C-CHHH-HHHTHHHHHHTTCSEE
T ss_pred ccccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCC-ccCCCC-C---C-cHHH-HHHHHHHHHHcCCcEE
Confidence 112479999999999984 4589999999999 765431 1 1 1233 7889999999999999
Q ss_pred EecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCC---CCCCCceeeeeC----CceEEEEEEec
Q 007227 496 VFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFT---TLQTTWSLYRDY----DHGFVKLTAFD 568 (612)
Q Consensus 496 lsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~---~~~~~ws~~~~~----~~Gy~~l~v~n 568 (612)
|+||+|.+++..+ .+|+.||++|++|....... ....++..+... .+||.+|++ +
T Consensus 218 l~GH~H~~~~~~~-----------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v-~ 279 (313)
T 1ute_A 218 LCGHDHNLQYLQD-----------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI-T 279 (313)
T ss_dssp EECSSSSEEEEEC-----------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-C
T ss_pred EECChhhhhhccC-----------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEE-E
Confidence 9999999998852 25788999999886432111 011234444332 389999999 7
Q ss_pred CCeEEEEEEECCCCcEEEEEEEEecCCC
Q 007227 569 HSNLLFEYKKSRDGKVYDSFRISRDYRD 596 (612)
Q Consensus 569 ~~~L~~~~~~~~dG~v~D~f~i~k~~~~ 596 (612)
++.++++|+ +.+|+++|+|+|.|+.+.
T Consensus 280 ~~~~~~~~~-~~~g~~~~~~~l~~~~~~ 306 (313)
T 1ute_A 280 PKEMSVTYI-EASGKSLFKTKLPRRARS 306 (313)
T ss_dssp SSCEEEEEE-ETTSCEEEEEEECCCC--
T ss_pred cCEEEEEEE-cCCCcEEEEEEeccccCc
Confidence 789999998 569999999999987543
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.90 E-value=3e-22 Score=208.74 Aligned_cols=250 Identities=15% Similarity=0.118 Sum_probs=161.8
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcccHHHHHHHhhhcccc-
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS- 358 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~- 358 (612)
...+||++++|+|...... ..+.. ......++++++. ..++|+||++||+++ .+....|+.+.+.++++..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~-~~~~~--~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~l~~~ 98 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDR-RLYGA--VDADDRLGELLEQLNQSGLRPDAIVFTGDLAD-KGEPAAYRKLRGLVEPFAAQ 98 (330)
T ss_dssp CCSEEEEEECCCCBCSSSC-CBTTT--BCHHHHHHHHHHHHHHHTCCCSEEEECSCCBT-TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCc-ccccc--cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHHHHhh
Confidence 3459999999999865321 11111 1123344444443 258999999999994 4555667777777776633
Q ss_pred -CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCC----CCCHHH
Q 007227 359 -TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDW----REGTEQ 433 (612)
Q Consensus 359 -~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~----~~g~~Q 433 (612)
.+|+++++||||+.. .+...+.-........+|++++++++|++||+.... ....+|
T Consensus 99 ~~~pv~~v~GNHD~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q 160 (330)
T 3ib7_A 99 LGAELVWVMGNHDDRA------------------ELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQ 160 (330)
T ss_dssp HTCEEEECCCTTSCHH------------------HHHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHH
T ss_pred cCCCEEEeCCCCCCHH------------------HHHHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHH
Confidence 789999999999741 001111111112245678999999999999998632 246899
Q ss_pred HHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCce
Q 007227 434 YRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNI 513 (612)
Q Consensus 434 ~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~ 513 (612)
++||++.|+... ...+|++.|+|+ +....... +. .... .++.|.+++++++|+++|+||+|..+...
T Consensus 161 ~~wl~~~l~~~~---~~~~iv~~Hh~p-~~~~~~~~-~~-~~~~-~~~~l~~~l~~~~v~~v~~GH~H~~~~~~------ 227 (330)
T 3ib7_A 161 LGWLAEELATPA---PDGTILALHHPP-IPSVLDMA-VT-VELR-DQAALGRVLRGTDVRAILAGHLHYSTNAT------ 227 (330)
T ss_dssp HHHHHHHTTSCC---TTCEEEECSSCS-SCCSSGGG-GG-GSBS-CHHHHHHHHTTSSEEEEEECSSSSCEEEE------
T ss_pred HHHHHHHHHhcc---cCCeEEEEECCC-CCCCcccc-cc-cccc-CHHHHHHHHhccCceEEEECCCCCcccce------
Confidence 999999999852 233777788877 54421111 10 1111 26789999999999999999999987542
Q ss_pred eccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCc
Q 007227 514 CTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGK 583 (612)
Q Consensus 514 ~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~ 583 (612)
.+|..+++.|+.+...... .............||..|++ +++.+.++++.-..+.
T Consensus 228 ------------~~g~~~~~~gs~~~~~~~~--~~~g~~~~~~~~~gy~iv~i-~~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 228 ------------FVGIPVSVASATCYTQDLT--VAAGGTRGRDGAQGCNLVHV-YPDTVVHSVIPLGGGE 282 (330)
T ss_dssp ------------ETTEEEEECCCSSCEECTT--SCTTCCCEESCSCEEEEEEE-CSSCEEEEEEECSCCC
T ss_pred ------------ECCEEEEecCcceeccCCC--CCCcceeccCCCCceEEEEE-ECCCeEEEEeccCCCC
Confidence 1467777777766432111 01111222345689999999 6778999998644443
No 7
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.88 E-value=1.9e-21 Score=197.03 Aligned_cols=243 Identities=11% Similarity=0.080 Sum_probs=154.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh----cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCe
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~----~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~ 362 (612)
+||++++|+|...... ..+.. ......++++++. ..++|+||++||+++ .+....|+.+.+.++.+ .+|+
T Consensus 1 mri~~iSD~H~~~~~~-~~~g~--~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~l--~~p~ 74 (274)
T 3d03_A 1 MLLAHISDTHFRSRGE-KLYGF--IDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPL 74 (274)
T ss_dssp CEEEEECCCCBCSTTC-CBTTT--BCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTTC--SSCE
T ss_pred CEEEEEecCCcCCCCc-ccccc--cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHhc--CCCE
Confidence 5899999999874321 11110 1122344444443 236899999999995 44455677777777665 6899
Q ss_pred EEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCC-CceEEEEEeCCEEEEEEcCCCCC----CCCHHHHHHH
Q 007227 363 MIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENR-AKFWYSTDYGMFRFCIADTEQDW----REGTEQYRFI 437 (612)
Q Consensus 363 ~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~yYsfd~G~v~Fi~LDT~~~~----~~g~~Q~~WL 437 (612)
++++||||.... +. ..+...| ++.... +..+|+++.++++|++||+.... ....+|++||
T Consensus 75 ~~v~GNHD~~~~-----~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl 139 (274)
T 3d03_A 75 YLIPGNHDDKAL-----FL---------EYLQPLC-PQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWL 139 (274)
T ss_dssp EEECCTTSCHHH-----HH---------HHHGGGS-GGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHH
T ss_pred EEECCCCCCHHH-----HH---------HHhhhhh-cCcccCCCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHH
Confidence 999999997410 00 0001111 111111 24578999999999999997532 2468999999
Q ss_pred HHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhC-CCeEEEecccccceeeecccCceecc
Q 007227 438 EHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICPIYQNICTN 516 (612)
Q Consensus 438 ~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~ 516 (612)
++.|++. +..++|++.|+|+ +....... +. .... .++.+.++++++ +|+++|+||+|.++...
T Consensus 140 ~~~l~~~---~~~~~iv~~H~p~-~~~~~~~~-~~-~~~~-~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--------- 203 (274)
T 3d03_A 140 EAQLFEG---GDKPATIFMHHPP-LPLGNAQM-DP-IACE-NGHRLLALVERFPSLTRIFCGHNHSLTMTQ--------- 203 (274)
T ss_dssp HHHHHHH---TTSCEEEEESSCS-SCCSCTTT-GG-GSBT-TTHHHHHHHHHCTTEEEEEECSSSSCEEEE---------
T ss_pred HHHHHhC---CCCCEEEEECCCC-cccCCccc-Cc-ccCc-CHHHHHHHHHhCCCceEEEeCCCCCchhhe---------
Confidence 9999984 3468999999998 65432111 10 1011 256899999998 89999999999987653
Q ss_pred CCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCc-eeeeeCCceEEEEEEecCCeEEEEEEEC
Q 007227 517 KEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTW-SLYRDYDHGFVKLTAFDHSNLLFEYKKS 579 (612)
Q Consensus 517 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~w-s~~~~~~~Gy~~l~v~n~~~L~~~~~~~ 579 (612)
.+|..++++++.+.... .. .+.+ +.+.....||..+++ ++..++++++.-
T Consensus 204 ---------~~g~~~~~~pg~~~~~~-~~--~~~~~~~~~~~~~gy~i~~i-~~~~~~~~~~~~ 254 (274)
T 3d03_A 204 ---------YRQALISTLPGTVHQVP-YC--HADTDPYYDLSPASCLMHRQ-VGEQWVSYQHSL 254 (274)
T ss_dssp ---------ETTEEEEECCCSSCBCC-CC--SSCCSCEEBCCCCEEEEEEE-ETTEEEEEEEEC
T ss_pred ---------ECCEEEEEcCCcceeec-cC--CCccccccccCCCceEEEEE-eCCcEEEEEEec
Confidence 13444555554332211 11 1112 234456789999999 666899888753
No 8
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.87 E-value=3.5e-21 Score=198.84 Aligned_cols=250 Identities=16% Similarity=0.183 Sum_probs=150.9
Q ss_pred CceEEEEEecCCCCCCCCCCccc----ccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCc-----ccHHHHHHHhh
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYN----NFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGY-----ISQWDQFTAQI 353 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~----~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~-----~~~wd~f~~~i 353 (612)
..+||++++|+|.........+. .+.......++++++.. .+||+||++||+++.... ...|+.+.+.+
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l 83 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 83 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHH
Confidence 35999999999987643211000 01111234445544432 689999999999964321 22333444444
Q ss_pred hccccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEe-CCEEEEEEcCCCC------
Q 007227 354 EPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDY-GMFRFCIADTEQD------ 426 (612)
Q Consensus 354 ~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~-G~v~Fi~LDT~~~------ 426 (612)
+.+ .+|+++++||||...-....+.......... ........+|. .+..||+|+. ++++||+||+...
T Consensus 84 ~~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~ 158 (322)
T 2nxf_A 84 DAC--SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQR-TGTDTGSDLIG--DDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 158 (322)
T ss_dssp HTT--CSEEEECCCHHHHHHCCHHHHHTSTTCCCC-------CEECGG--GTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred Hhc--CCcEEEecCCCCcccCCHHHHhhhhCCcccc-cccccccccCC--CCceEEEEecCCCEEEEEEcCceecccccC
Confidence 432 6899999999998310000010000000000 00000011332 2456899998 9999999998642
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCC
Q 007227 427 ----------------------------------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDL 466 (612)
Q Consensus 427 ----------------------------------------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~ 466 (612)
.....+|++||+++|++..+ +..++||++|+|+ +....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~-~~~~~iv~~H~p~-~~~~~ 236 (322)
T 2nxf_A 159 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDH-KQERVLIFSHLPV-HPCAA 236 (322)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHH-HTCEEEEEESSCC-CTTSS
T ss_pred CCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHh-cCCcEEEEEccCC-CCCCC
Confidence 01238999999999998632 2457899999998 65432
Q ss_pred CccCCCCccchhhHHHHHHHHHhC-CCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCC
Q 007227 467 SYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFT 545 (612)
Q Consensus 467 ~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~ 545 (612)
. .... .. .++.+.+++.++ +|+++|+||+|.+++... .+|+.|+++|+.-.
T Consensus 237 ~---~~~~-~~-~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-----------------~~g~~~i~~~~~~~------ 288 (322)
T 2nxf_A 237 D---PICL-AW-NHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-----------------SSGAQHITLEGVIE------ 288 (322)
T ss_dssp C---GGGS-CT-THHHHHHHHHTCTTEEEEEECSCTTCEEEEC-----------------TTSCEEEECCCGGG------
T ss_pred C---cccc-cc-CHHHHHHHHhcCCCeEEEEcCCcCCCCceec-----------------cCCceEEEecchhh------
Confidence 1 0001 11 267899999999 799999999999988741 24677777665411
Q ss_pred CCCCCceeeeeCCceEEEEEEecCCeEEEEEEE
Q 007227 546 TLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 546 ~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~ 578 (612)
......||..+++ ++..+.++.+.
T Consensus 289 --------~~~~~~~y~~v~~-~~~~~~~~~~~ 312 (322)
T 2nxf_A 289 --------TPPHSHAFATAYL-YEDRMVMKGRG 312 (322)
T ss_dssp --------CCTTSCEEEEEEE-CSSEEEEEEEE
T ss_pred --------CCCCCCcEEEEEE-ECCeEEEEecc
Confidence 0123578999998 67788887664
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.73 E-value=1.9e-16 Score=172.39 Aligned_cols=216 Identities=13% Similarity=0.157 Sum_probs=126.5
Q ss_pred CCceEEEEEecCCCCCCCC---CCcccc---cc-----cChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccHHHHHH
Q 007227 284 DSLQQVIIFGDMGKDEADG---SNEYNN---FQ-----RGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFT 350 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~---~~~~~~---~~-----~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~wd~f~ 350 (612)
+..+||++++|+|.+.... ...+.. .. ......++++++. ..+||+||++||+++ .+....++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTN-NGEKTSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBS-SCCHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCC-CCCHHHHHHHH
Confidence 3459999999999863210 000000 00 0023344554443 257999999999995 34444566666
Q ss_pred Hhhhccc-cCCCeEEccCCCccCCCCCCCCCCCCCC--CCcc-ccccccccccCC-------CCCCceEEEEEeCCEEEE
Q 007227 351 AQIEPIA-STVPYMIASGNHERDWPGTGSFYGNMDS--GGEC-GVLVENMFYVPT-------ENRAKFWYSTDYGMFRFC 419 (612)
Q Consensus 351 ~~i~~l~-~~vP~~~~~GNHD~~~~~~~~~y~~~ds--gge~-g~~~~~~f~~P~-------~~~~~~yYsfd~G~v~Fi 419 (612)
+.++.+. ..+|+++++||||........ +..... .... ...+...|.-.. ......|+.+..++++|+
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARK-FEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEE-EETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccc-cCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 6666553 368999999999986421110 000000 0000 000111111000 001234555568899999
Q ss_pred EEcCCCC------------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHH
Q 007227 420 IADTEQD------------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLW 487 (612)
Q Consensus 420 ~LDT~~~------------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll 487 (612)
+||+... .....+|++||++.|+.+.. +...+|++.|+|+ +....... +. .... .++.+.+++
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~-~~~~~~~~-~~-~~~~-~~~~l~~ll 269 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNL-TDHNDVIQ-KG-YTIN-YNQQVIDAL 269 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBS-SCSSCC---CC-SBCT-THHHHHHHH
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCC-cccccccc-cc-cccc-cHHHHHHHH
Confidence 9999742 12458999999999988642 2356899999998 55422111 11 1111 267899999
Q ss_pred HhCCCeEEEecccccceee
Q 007227 488 QKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 488 ~k~~VdlvlsGH~H~YeRt 506 (612)
++++|+++|+||+|..+..
T Consensus 270 ~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 270 TEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHTTCCEEEECSSCSCEEE
T ss_pred HHcCCeEEEECCcccCchh
Confidence 9999999999999997754
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.46 E-value=2e-12 Score=126.56 Aligned_cols=171 Identities=12% Similarity=0.103 Sum_probs=97.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+||+++||+|.+. ..++++++.. .++|+|+++||+++.......+.++++.++.+ .+|+++
T Consensus 6 mri~~iSD~H~~~---------------~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~~ 68 (228)
T 1uf3_A 6 RYILATSNPMGDL---------------EALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTAY 68 (228)
T ss_dssp CEEEEEECCTTCH---------------HHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEEE
T ss_pred EEEEEEeeccCCH---------------HHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEEE
Confidence 7999999999642 2233333322 38999999999995432344445566655543 579999
Q ss_pred ccCCCccCCCCCCCCCCCCCCCCccccccccccccCCC-CCCceEEEEEeC-CEEEEEEcCCC--CCCCC--------HH
Q 007227 365 ASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE-NRAKFWYSTDYG-MFRFCIADTEQ--DWREG--------TE 432 (612)
Q Consensus 365 ~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~-~~~~~yYsfd~G-~v~Fi~LDT~~--~~~~g--------~~ 432 (612)
++||||.... .++. ..+......|.. ...+ ..+.++ ++.|+.++... .+... ..
T Consensus 69 v~GNHD~~~~---~~~~---------~~~~~~~~~~~~~~l~~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 134 (228)
T 1uf3_A 69 VPGPQDAPIW---EYLR---------EAANVELVHPEMRNVHE--TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAW 134 (228)
T ss_dssp ECCTTSCSHH---HHHH---------HHHHHHHHCTTEEECBT--SEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHH
T ss_pred ECCCCCchhH---HHHH---------hhhhhhccCcceEEccc--ceEeeCCCcEEecCCCCcCCCCccChhhcccchhh
Confidence 9999997410 0000 000000000100 0001 124556 78898887431 11111 22
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccc
Q 007227 433 QYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVH 501 (612)
Q Consensus 433 Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H 501 (612)
+.+|+++.|++. ...+.|++.|+|+ +..... ..+.+.+..+++++++|++++||+|
T Consensus 135 ~~~~~~~~l~~~---~~~~~il~~H~p~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 135 VAEYRLKALWEL---KDYPKIFLFHTMP-YHKGLN---------EQGSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp HHHHHHGGGGGS---CSCCEEEEESSCB-CBTTTB---------TTSBHHHHHHHHHHCCSEEEECCSS
T ss_pred hHHHHHHHHHhC---CCCCeEEEEccCc-ccCCcc---------ccCHHHHHHHHHHhCCCEEEEcccc
Confidence 334555556553 2246899999998 543110 1113467778888999999999999
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.38 E-value=5.9e-12 Score=126.33 Aligned_cols=181 Identities=12% Similarity=0.122 Sum_probs=94.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccH----------------H----
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQ----------------W---- 346 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~----------------w---- 346 (612)
+||+++||+|.+.. .+..+.+.++. .++|+|+++||++.. +.... +
T Consensus 6 mri~~iSDlH~~~~------------~~~~~l~~~~~-~~~D~vi~~GDl~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~ 71 (260)
T 2yvt_A 6 RKVLAIKNFKERFD------------LLPKLKGVIAE-KQPDILVVVGNILKN-EALEKEYERAHLARREPNRKVIHENE 71 (260)
T ss_dssp CEEEEEECCTTCGG------------GHHHHHHHHHH-HCCSEEEEESCCCCC-HHHHHHHHHHHHTTCCCCTHHHHHHH
T ss_pred EEEEEEeecCCChH------------HHHHHHHHHHh-cCCCEEEECCCCCCc-cCcchhhhhhhhhhcccchhhhhHHH
Confidence 79999999997531 12222222222 589999999999943 32200 0
Q ss_pred ----HHHHHhhhcccc-CCCeEEccCCCccCCCCC-CCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEE
Q 007227 347 ----DQFTAQIEPIAS-TVPYMIASGNHERDWPGT-GSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCI 420 (612)
Q Consensus 347 ----d~f~~~i~~l~~-~vP~~~~~GNHD~~~~~~-~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~ 420 (612)
+.+.+.++.+.. .+|+++++||||...... ...+. +.+. +.....+ .+. ..+++++++|+.
T Consensus 72 ~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~------~~~~-~~~~~~l-----~~~-~~~~~~~~~i~g 138 (260)
T 2yvt_A 72 HYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYE------AETA-YPNIRVL-----HEG-FAGWRGEFEVIG 138 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHHHHHHHHH------TTTT-CTTEEEC-----SSE-EEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhhhhHHHHhh------hccC-CcceEEe-----cCc-ceEEECCEEEEe
Confidence 122223333332 589999999999742000 00000 0000 0000000 011 136788999999
Q ss_pred EcCCCCC-CCCHHHHH----HHH----HHHhhccCCCCCeEEEEEccccccCC-CCCccCCCCccchhhHHHHHHHHHhC
Q 007227 421 ADTEQDW-REGTEQYR----FIE----HCLASVDRQKQPWLIFLAHRVLGYSS-DLSYAVEGSFAEPMGRESLQKLWQKY 490 (612)
Q Consensus 421 LDT~~~~-~~g~~Q~~----WL~----~~L~~~~r~~~~w~Iv~~H~P~~yss-~~~~~~~~~~~~~~~r~~l~~ll~k~ 490 (612)
++..... ....+|.. |+. +.|++. .....|++.|+|+ +.. ........ ...+.+.+..++.++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~---~~~~~Il~~H~pp-~~~~~d~~~~~~---~~~~~~~l~~~~~~~ 211 (260)
T 2yvt_A 139 FGGLLTEHEFEEDFVLKYPRWYVEYILKFVNEL---KPRRLVTIFYTPP-IGEFVDRTPEDP---KHHGSAVVNTIIKSL 211 (260)
T ss_dssp ECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGS---CCCEEEEEESSCC-SCSSTTCBTTBS---CCCSCHHHHHHHHHH
T ss_pred cCCCcCCCCcCHHHHhhcchhhHHHHHHHHHhc---CCCCEEEEECCCc-cccccccCcccc---cccCcHHHHHHHHHh
Confidence 9753210 01112221 433 333432 2235688899998 543 11100000 111245778888899
Q ss_pred CCeEEEecccc
Q 007227 491 KVDIAVFGHVH 501 (612)
Q Consensus 491 ~VdlvlsGH~H 501 (612)
+++++++||+|
T Consensus 212 ~~~~vl~GH~H 222 (260)
T 2yvt_A 212 NPEVAIVGHVG 222 (260)
T ss_dssp CCSEEEECSSC
T ss_pred CCCEEEECCcc
Confidence 99999999999
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.33 E-value=5.3e-12 Score=132.38 Aligned_cols=256 Identities=12% Similarity=0.071 Sum_probs=126.0
Q ss_pred CceEEEEEecCCCCCC--CCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcccH--HHHHHHhhhcccc
Q 007227 285 SLQQVIIFGDMGKDEA--DGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQ--WDQFTAQIEPIAS 358 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~--~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~~~--wd~f~~~i~~l~~ 358 (612)
..+||++++|+|.+.. .......+. ......++++++. ..++|+|+++||++++.+.... ...+.+.++.+..
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~-~~~~~~l~~lv~~~~~~~~D~vliaGD~l~d~~~~~~~~~~~~~~~l~~L~~ 95 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRR-EELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMR 95 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECH-HHHHHHHHHHHHHHHHHTCSEEEEESCSBSCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcChh-HHHHHHHHHHHHHHHHhCCCEEEECCccccCCCCCCHHHHHHHHHHHHHHHh
Confidence 3499999999997621 000000000 0112345555443 2589999999993335554322 3345555555443
Q ss_pred CCCeEEccCCCccCCCCCCCCCCCCCCCCcccccccc--c--cccCCCCCCceEEEEEeCCEEEEEEcCCCCC-------
Q 007227 359 TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN--M--FYVPTENRAKFWYSTDYGMFRFCIADTEQDW------- 427 (612)
Q Consensus 359 ~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~--~--f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~------- 427 (612)
.+|+++++||||... . ..+ ..+.. . +.+..+......+.++.+++.|+.++.....
T Consensus 96 ~~pv~~i~GNHD~~~-~--~~~----------~~~l~~~g~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~ 162 (336)
T 2q8u_A 96 TAPVVVLPGNHDWKG-L--KLF----------GNFVTSISSDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNE 162 (336)
T ss_dssp HSCEEECCC-------C--HHH----------HHHHHHHCSSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCS
T ss_pred cCCEEEECCCCCccc-c--ccH----------HHHHHhcCCEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhh
Confidence 389999999999853 1 000 00000 0 1111110000011222356888888643221
Q ss_pred CCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeee
Q 007227 428 REGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERIC 507 (612)
Q Consensus 428 ~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~ 507 (612)
....+|.+|+.+.|...-+....+.|++.|.|+ +..... ..+..... ..+...+.+.++|++++||.|..+...
T Consensus 163 ~~~~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~-~~~~~~-~~~~~~~~----~~v~~~l~~~~~d~v~~GH~H~~~~~~ 236 (336)
T 2q8u_A 163 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGY-AGIEQGRE----IIINRALIPSVVDYAALGHIHSFREIQ 236 (336)
T ss_dssp SHHHHHHHHHHHHHHHHHHTCSSEEEEEEESEE-TTCC---------CC----CEECGGGSCTTSSEEEEESCSSCEEEE
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCEEEEECccc-cCCCCC-CCccchhh----cccCHHHccccCCEEEEccccCceEeC
Confidence 112467899988886521023568999999998 543110 00000000 001112335689999999999987652
Q ss_pred cccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCcEEEE
Q 007227 508 PIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDS 587 (612)
Q Consensus 508 p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v~D~ 587 (612)
. .+..+-.|+... ..++.. ...-||..|++.++....++++.-.. +.+-+
T Consensus 237 ---~----------------~~~i~y~GS~~~---------~s~~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~-r~~~~ 286 (336)
T 2q8u_A 237 ---K----------------QPLTIYPGSLIR---------IDFGEE-ADEKGAVFVELKRGEPPRYERIDASP-LPLKT 286 (336)
T ss_dssp ---E----------------TTEEEECCCSSC---------CSGGGT-TCCCEEEEEEEETTSCCEEEEEECCC-CCEEE
T ss_pred ---C----------------CccEEECCCCcC---------CCcccc-CCCCEEEEEEEeCCCccEEEEEECCC-EEEEE
Confidence 0 111122443211 111110 12578999999544457888886544 66666
Q ss_pred EEE
Q 007227 588 FRI 590 (612)
Q Consensus 588 f~i 590 (612)
+.+
T Consensus 287 ~~~ 289 (336)
T 2q8u_A 287 LYY 289 (336)
T ss_dssp EEE
T ss_pred eec
Confidence 665
No 13
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.26 E-value=2.2e-10 Score=108.74 Aligned_cols=165 Identities=19% Similarity=0.242 Sum_probs=106.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC-CCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK-NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~-~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~ 365 (612)
+|++++||+|.. ...++++++... ++|+|+++||+.+. .++.+.. |++.+
T Consensus 7 m~i~~isD~H~~---------------~~~~~~~~~~~~~~~d~i~~~GD~~~~------------~l~~l~~--~~~~v 57 (176)
T 3ck2_A 7 QTIIVMSDSHGD---------------SLIVEEVRDRYVGKVDAVFHNGDSELR------------PDSPLWE--GIRVV 57 (176)
T ss_dssp EEEEEECCCTTC---------------HHHHHHHHHHHTTTSSEEEECSCCCSC------------TTCGGGT--TEEEC
T ss_pred cEEEEEecCCCC---------------HHHHHHHHHHhhcCCCEEEECCCCchH------------HHHhhhC--CeEEe
Confidence 799999999832 234555555433 79999999998421 2333332 89999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhcc
Q 007227 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~ 445 (612)
.||||... .+|. ...++
T Consensus 58 ~GNhD~~~------------------------~~p~------~~~~~--------------------------------- 74 (176)
T 3ck2_A 58 KGNMDFYA------------------------GYPE------RLVTE--------------------------------- 74 (176)
T ss_dssp CCTTCCST------------------------TCCS------EEEEE---------------------------------
T ss_pred cCcccchh------------------------cCCc------EEEEE---------------------------------
Confidence 99999641 0121 00010
Q ss_pred CCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCC
Q 007227 446 RQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGS 525 (612)
Q Consensus 446 r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~ 525 (612)
-..++|++.|.|+ +... .+ .+.+..+++++++|++++||+|......
T Consensus 75 --~~~~~i~~~Hg~~-~~~~-----~~-------~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------ 121 (176)
T 3ck2_A 75 --LGSTKIIQTHGHL-FDIN-----FN-------FQKLDYWAQEEEAAICLYGHLHVPSAWL------------------ 121 (176)
T ss_dssp --ETTEEEEEECSGG-GTTT-----TC-------SHHHHHHHHHTTCSEEECCSSCCEEEEE------------------
T ss_pred --ECCeEEEEECCCc-cCCC-----CC-------HHHHHHHHHhcCCCEEEECCcCCCCcEE------------------
Confidence 0125788889887 5321 00 3467778888999999999999865321
Q ss_pred CCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCcEEEEEEE
Q 007227 526 LNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGKVYDSFRI 590 (612)
Q Consensus 526 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~v~D~f~i 590 (612)
.+++.++-.|+.|..... ....+|..+++ ++..+.++++ .-+|+++.++++
T Consensus 122 ~~~~~~inpGs~~~~~~~------------~~~~~y~il~~-~~~~~~v~~~-~~~~~~~~~~~~ 172 (176)
T 3ck2_A 122 EGKILFLNPGSISQPRGT------------IRECLYARVEI-DDSYFKVDFL-TRDHEVYPGLSK 172 (176)
T ss_dssp ETTEEEEEECCSSSCCTT------------CCSCCEEEEEE-CSSEEEEEEE-CTTSCBCTTCCE
T ss_pred ECCEEEEECCCCCcCCCC------------CCCCeEEEEEE-cCCEEEEEEE-EECCEEcchhhc
Confidence 145677778876653210 11368999998 6678999987 567887775543
No 14
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.22 E-value=4.9e-10 Score=107.95 Aligned_cols=180 Identities=16% Similarity=0.227 Sum_probs=110.0
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+||+++||+|..... ....+.+.+++++ .++|+|+++||++. ...++.++.+ ..|++.++
T Consensus 11 m~i~~iSD~H~~~~~---------~~~~~~l~~~~~~-~~~d~ii~~GDl~~--------~~~~~~l~~~--~~~~~~v~ 70 (192)
T 1z2w_A 11 MLVLVLGDLHIPHRC---------NSLPAKFKKLLVP-GKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIVR 70 (192)
T ss_dssp CEEEEECCCCBTTTC---------SSCCHHHHTTCCT-TSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEECC
T ss_pred eEEEEEecCCCCccc---------hhHHHHHHHHhcc-CCCCEEEEcCCCCC--------HHHHHHHHhc--CCCEEEEc
Confidence 799999999975321 0111233443332 57999999999983 2233334433 25899999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccC
Q 007227 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDR 446 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r 446 (612)
||||... .+|. ...++.
T Consensus 71 GNhD~~~------------------------~lp~------~~~~~~--------------------------------- 87 (192)
T 1z2w_A 71 GDFDENL------------------------NYPE------QKVVTV--------------------------------- 87 (192)
T ss_dssp CTTCCCT------------------------TSCS------EEEEEE---------------------------------
T ss_pred CCcCccc------------------------cCCc------ceEEEE---------------------------------
Confidence 9999741 0121 111111
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCC
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSL 526 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~ 526 (612)
..++|++.|.++ +.. + . ..+.+..++++.++|++++||+|...... .
T Consensus 88 --~~~~i~l~Hg~~-~~~--~---~-------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------~ 134 (192)
T 1z2w_A 88 --GQFKIGLIHGHQ-VIP--W---G-------DMASLALLQRQFDVDILISGHTHKFEAFE------------------H 134 (192)
T ss_dssp --TTEEEEEECSCC-CCB--T---T-------CHHHHHHHHHHHSSSEEECCSSCCCEEEE------------------E
T ss_pred --CCEEEEEECCCc-CCC--C---C-------CHHHHHHHHHhcCCCEEEECCcCcCccEe------------------E
Confidence 235788888554 321 1 0 14567777778899999999999854321 1
Q ss_pred CCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007227 527 NGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGK-VYDSFRISR 592 (612)
Q Consensus 527 ~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~-v~D~f~i~k 592 (612)
+++.++-.|+.+....+ +. .....+|..+++ ++..+.++++.-..++ .+.++++.|
T Consensus 135 ~~~~~inpGS~~~~~~~-------~~--~~~~~~y~il~~-~~~~~~~~~~~~~~~~~~v~~~~~~~ 191 (192)
T 1z2w_A 135 ENKFYINPGSATGAYNA-------LE--TNIIPSFVLMDI-QASTVVTYVYQLIGDDVKVERIEYKK 191 (192)
T ss_dssp TTEEEEECCCTTCCCCS-------SC--SCCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCEEEEECCcccccCCC-------CC--cCCCCcEEEEEE-ECCEEEEEEEEccCCEEEEEEEEEcc
Confidence 46777777776553211 00 123578999998 5678999988655554 466666665
No 15
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.22 E-value=5.5e-11 Score=119.07 Aligned_cols=211 Identities=7% Similarity=-0.023 Sum_probs=108.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc-----C--CCCEEEEcCccccCCCcccHHHHHHHhhhccccC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL-----K--NIDIVFHIGDICYANGYISQWDQFTAQIEPIAST 359 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~-----~--~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~ 359 (612)
+|++++||+|... ..++++++.. . ++|+|+++||++. .|... .+..+.++.+...
T Consensus 2 m~i~~isD~H~~~---------------~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~-~g~~~--~~~~~~l~~l~~~ 63 (252)
T 1nnw_A 2 VYVAVLANIAGNL---------------PALTAALSRIEEMREEGYEIEKYYILGNIVG-LFPYP--KEVIEVIKDLTKK 63 (252)
T ss_dssp CEEEEEECCTTCH---------------HHHHHHHHHHHHHHHTTCCEEEEEEESCSSS-SSSCH--HHHHHHHHHHHHH
T ss_pred cEEEEEeecCCCH---------------HHHHHHHHHHHhhhhccCCCCEEEEeCccCC-CCCCH--HHHHHHHHhhHhh
Confidence 5899999999531 1233333222 2 7999999999994 33221 2233344433323
Q ss_pred CCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCC--CCCCCCHHHHHHH
Q 007227 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTE--QDWREGTEQYRFI 437 (612)
Q Consensus 360 vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~--~~~~~g~~Q~~WL 437 (612)
.|+++++||||...... .. .++ .+..... ++..... .... .......+|++||
T Consensus 64 ~~~~~v~GNhD~~~~~~---~~------~~~-~~~~~~~------------~~~~~~~---~~~~~~~~~~l~~~~~~~L 118 (252)
T 1nnw_A 64 ENVKIIRGKYDQIIAMS---DP------HAT-DPGYIDK------------LELPGHV---KKALKFTWEKLGHEGREYL 118 (252)
T ss_dssp SCEEEECCHHHHHHHHS---CT------TCS-SSGGGGG------------SSCCHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred cCeeEEecchHHHhhcc---cc------ccC-Ccccccc------------hhhhHHH---HHHHHHHHHHCCHHHHHHH
Confidence 58999999999742100 00 000 0000000 0000000 0000 0001235788998
Q ss_pred HHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhC-CCeEEEecccccceeeecccCceecc
Q 007227 438 EHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKY-KVDIAVFGHVHNYERICPIYQNICTN 516 (612)
Q Consensus 438 ~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~-~VdlvlsGH~H~YeRt~p~~~~~~~~ 516 (612)
++.............|++.|+++ +.....+. . .....+.+..++.++ +++++++||+|......
T Consensus 119 ~~lp~~~~~~~~~~~i~~~H~~p-~~~~~~~~----~-~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~--------- 183 (252)
T 1nnw_A 119 RDLPIYLVDKIGGNEVFGVYGSP-INPFDGEV----L-AEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM--------- 183 (252)
T ss_dssp HTSCSCEEEEETTEEEEEESSCS-SCTTTCCC----C-SSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE---------
T ss_pred HhCCceEEEeeCCcEEEEEcCCC-CCCccccc----C-CCCCHHHHHHHHhcCCCCCEEEECCccccceEe---------
Confidence 76433221111234677788776 33211000 0 111146788888888 99999999999855431
Q ss_pred CCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEE
Q 007227 517 KEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 517 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~ 577 (612)
.+++++|..|+.|..... +...+|..+++ ++..+.++.+
T Consensus 184 ---------~~~~~~in~Gs~~~~~~~------------~~~~~y~il~~-~~~~v~~~~v 222 (252)
T 1nnw_A 184 ---------TRYGRVVCPGSVGFPPGK------------EHKATFALVDV-DTLKPKFIEV 222 (252)
T ss_dssp ---------ETTEEEEEECCSSSCSSS------------SCCEEEEEEET-TTCCEEEEEE
T ss_pred ---------cCCeEEEECCCccCCCCC------------CCcceEEEEEC-CCCeEEEEEe
Confidence 146777888887654210 12357888876 4445554433
No 16
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.19 E-value=2.5e-10 Score=112.12 Aligned_cols=187 Identities=21% Similarity=0.308 Sum_probs=110.3
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEc
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~ 365 (612)
.+|++++||+|.+.... .+ ...+.+++++ .++|+|+++||++. .+.++.++.+ ..|++++
T Consensus 25 ~m~i~~iSD~H~~~~~~-----~l----~~~l~~~~~~-~~~D~vi~~GDl~~--------~~~l~~l~~~--~~~v~~V 84 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAK-----EL----PSNFRELLAT-DKINYVLCTGNVCS--------QEYVEMLKNI--TKNVYIV 84 (215)
T ss_dssp CEEEEEECCCCTTTTCS-----SC----CGGGHHHHHC-TTCCEEEECSCCCC--------HHHHHHHHHH--CSCEEEC
T ss_pred CcEEEEEecCCCCCChH-----HH----HHHHHHHHhc-CCCCEEEECCCCCC--------HHHHHHHHHc--CCCEEEe
Confidence 37999999999753210 01 1234444442 67999999999983 2334444433 3589999
Q ss_pred cCCCccCCCCCCCCCCCCCCCCcccccccccc--ccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhh
Q 007227 366 SGNHERDWPGTGSFYGNMDSGGECGVLVENMF--YVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f--~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~ 443 (612)
+||||..... + ...| .+|. .. .
T Consensus 85 ~GNHD~~~~~----~-------------~~~~~~~lp~------~~---------------------------------~ 108 (215)
T 2a22_A 85 SGDLDSAIFN----P-------------DPESNGVFPE------YV---------------------------------V 108 (215)
T ss_dssp CCTTCCSCCB----C-------------CGGGTBCCCS------EE---------------------------------E
T ss_pred cCCCcCcccc----c-------------ChhhHhhCCc------eE---------------------------------E
Confidence 9999975210 0 0000 0000 00 0
Q ss_pred ccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCcccc
Q 007227 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYK 523 (612)
Q Consensus 444 ~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~ 523 (612)
. ....++|++.|.++ +.. + . ..+.+..++++.++|++++||+|......
T Consensus 109 ~--~~~~~~i~l~Hg~~-~~~--~---~-------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~---------------- 157 (215)
T 2a22_A 109 V--QIGEFKIGLMHGNQ-VLP--W---D-------DPGSLEQWQRRLDCDILVTGHTHKLRVFE---------------- 157 (215)
T ss_dssp E--EETTEEEEEECSTT-SSS--T---T-------CHHHHHHHHHHHTCSEEEECSSCCCEEEE----------------
T ss_pred E--ecCCeEEEEEcCCc-cCC--C---C-------CHHHHHHHHhhcCCCEEEECCcCCCccEe----------------
Confidence 0 01235788888554 321 1 0 14567777878899999999999854321
Q ss_pred CCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEECCCCc-EEEEEEEE
Q 007227 524 GSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKKSRDGK-VYDSFRIS 591 (612)
Q Consensus 524 ~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~~~dG~-v~D~f~i~ 591 (612)
.+++.++-.|+.|....+. . .....+|..+++ ++..+.++++.-.+|+ .+.+..+.
T Consensus 158 --~~~~~~inpGS~~~~~~~~-------~--~~~~~~y~il~i-~~~~i~~~~~~~~~~~~~v~~~~~~ 214 (215)
T 2a22_A 158 --KNGKLFLNPGTATGAFSAL-------T--PDAPPSFMLMAL-QGNKVVLYVYDLRDGKTNVAMSEFS 214 (215)
T ss_dssp --ETTEEEEECCCSSCCCCTT-------S--TTCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEE
T ss_pred --eCCEEEEECCcccccCCCC-------C--CCCCCcEEEEEE-eCCcEEEEEEEecCCeEEEEEEEee
Confidence 1466777777765532110 0 123568999998 5678999988755565 35555544
No 17
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.17 E-value=2.5e-10 Score=117.11 Aligned_cols=209 Identities=16% Similarity=0.132 Sum_probs=111.2
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
...+||+++||+|.... . + +..++|+||++||++. .|...+++.+.+.++.+. ..|++
T Consensus 57 ~~~mri~~iSD~H~~~~-----------~----l-----~i~~~D~vi~aGDl~~-~g~~~e~~~~~~~L~~l~-~~~v~ 114 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTD-----------G----I-----QMPYGDILLHTGDFTE-LGLPSEVKKFNDWLGNLP-YEYKI 114 (296)
T ss_dssp TTEEEEEEEBCCTTCCT-----------T----C-----CCCSCSEEEECSCCSS-SCCHHHHHHHHHHHHTSC-CSEEE
T ss_pred CCCeEEEEEeeCCCCcc-----------h----h-----ccCCCCEEEECCcccC-CCCHHHHHHHHHHHHhCC-CCeEE
Confidence 34599999999997531 0 1 2367999999999994 455555666666666542 24689
Q ss_pred EccCCCccCCCCCCCCCCCC--CCCCcc----ccc---cccccccCCCC--CCceEEEEEeCCEEEEEEcCCCCCCCC--
Q 007227 364 IASGNHERDWPGTGSFYGNM--DSGGEC----GVL---VENMFYVPTEN--RAKFWYSTDYGMFRFCIADTEQDWREG-- 430 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~--dsgge~----g~~---~~~~f~~P~~~--~~~~yYsfd~G~v~Fi~LDT~~~~~~g-- 430 (612)
+++||||+.... .++... ...... ... +...-.++.+. ... -+..+++++|+...-...+.+.
T Consensus 115 ~V~GNHD~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~--~~~~i~Gl~i~Gsp~tP~~~~~~f 190 (296)
T 3rl5_A 115 VIAGNHELTFDK--EFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD--SEVTVKGFRIYGAPWTPWFNGWGF 190 (296)
T ss_dssp ECCCTTCGGGCH--HHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSS--EEEEETTEEEEEECCBCC--CCTT
T ss_pred EEcCCcccccch--hhhhhhhcccccccccccccccchhhhHhhhcCCeEEecC--CcEEECCEEEEEecCCCCCCCcCC
Confidence 999999985311 111000 000000 000 00000011100 001 1456788998884422111111
Q ss_pred -HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHH-HhCCCeEEEecccccceeeec
Q 007227 431 -TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLW-QKYKVDIAVFGHVHNYERICP 508 (612)
Q Consensus 431 -~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll-~k~~VdlvlsGH~H~YeRt~p 508 (612)
.++.+++.+.+... .....|++.|.|+ |...+..... ....+.+.|..++ ++++++++++||+|......
T Consensus 191 ~~~~~~~~~~~~~~i---p~~~dILvTH~PP-~g~~D~~~~~---~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~- 262 (296)
T 3rl5_A 191 NLPRGQSLLDKWNLI---PEGTDILMTHGPP-LGFRDWVPKE---LQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM- 262 (296)
T ss_dssp BCCTTHHHHHHHTTS---CTTCSEEEESSCB-TTSSCEEGGG---TEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE-
T ss_pred CcchHHHHHHHHhhC---CCCCeEEEECCCc-cccccccccc---cCcCChHHHHHHHHHhcCCCEEEECCccCCCceE-
Confidence 11222443333433 2345689999998 7653211000 1122345677766 68999999999999843221
Q ss_pred ccCceeccCCCccccCCCCCeEEEEECCCCCCCC
Q 007227 509 IYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLS 542 (612)
Q Consensus 509 ~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~ 542 (612)
..+++++|-.|+-|..++
T Consensus 263 ----------------~~g~t~vvNpGs~~~~~~ 280 (296)
T 3rl5_A 263 ----------------TDGYTTYINASTCTVSFQ 280 (296)
T ss_dssp ----------------ECSSCEEEECBCSCTTSC
T ss_pred ----------------EECCEEEEECCcCCcCcC
Confidence 014677777777766543
No 18
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.03 E-value=4.3e-09 Score=112.50 Aligned_cols=185 Identities=14% Similarity=0.091 Sum_probs=95.5
Q ss_pred CceEEEEEecCCCCCCCCCCcccc--cccChHHHHHHHHHh--cCCCCEEEEcCccccCCCc-ccHHHHHHHhhhcccc-
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNN--FQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPIAS- 358 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~--~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~-~~~wd~f~~~i~~l~~- 358 (612)
..+||++++|+|.+... +.. ........++++++. ..++|+||++||++..... ...+..+.+.++.+..
T Consensus 19 ~~mrilhiSD~Hlg~~~----~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~~ 94 (386)
T 3av0_A 19 SHMMFVHIADNHLGYRQ----YNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHEN 94 (386)
T ss_dssp CCCEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEccCCCCccc----cCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 45999999999986421 100 000112345555543 2689999999999843321 2234456666666543
Q ss_pred CCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHH--
Q 007227 359 TVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRF-- 436 (612)
Q Consensus 359 ~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~W-- 436 (612)
.+|+++++||||.......... . ..+...+..-.+ ..++..+-+++.|+.++...... ..+..+|
T Consensus 95 ~~pv~~v~GNHD~~~~~~~~~~--------~-~~l~~~v~~l~~---~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l~ 161 (386)
T 3av0_A 95 NIKVYIVAGNHEMPRRLGEESP--------L-ALLKDYVKILDG---KDVINVNGEEIFICGTYYHKKSK-REEMLDKLK 161 (386)
T ss_dssp TCEEEECCCGGGSCSSTTSCCG--------G-GGGTTTCEECSE---EEEEEETTEEEEEEEECCCCSTT-HHHHHHHHH
T ss_pred CCcEEEEcCCCCCCccccccCH--------H-HHHHHHeEEcCC---CcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHHH
Confidence 5899999999997532110000 0 000000111100 11221122458888888654321 1222333
Q ss_pred -HHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEeccccccee
Q 007227 437 -IEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (612)
Q Consensus 437 -L~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeR 505 (612)
+...+. ...+.|++.|.|+ .... . +...... .. +. ++|++++||+|..++
T Consensus 162 ~l~~~~~-----~~~~~Ill~H~~~-~~~~---~--~~~~~~~--~~----l~--~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 162 NFESEAK-----NYKKKILMLHQGI-NPYI---P--LDYELEH--FD----LP--KFSYYALGHIHKRIL 212 (386)
T ss_dssp HHHHHHH-----TCSSEEEEECCCC-TTTS---S--SSCSSCG--GG----SC--CCSEEEECSCCSCEE
T ss_pred Hhhhhcc-----cCCCEEEEECcCc-cccC---C--CCcccCH--HH----hh--hCCeEEccCCCCCcc
Confidence 333322 2346899999987 3211 1 1110111 11 11 399999999998743
No 19
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.02 E-value=6.9e-10 Score=118.39 Aligned_cols=198 Identities=13% Similarity=0.219 Sum_probs=101.7
Q ss_pred eEEEEEecCCCCCCCCCCcccc-cccChHHHHHHHHHh--cCCCCEEEEcCccccCCCc--ccHHHHHHHhhhccccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNN-FQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~-~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~~~vP 361 (612)
+||++++|+|.+.......+.. ........++++++. ..++|+||++||++++.+. ...+..+.+.++.+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 5899999999875310000000 001112344554432 2589999999999944332 2334455555555543389
Q ss_pred eEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCC----CCCceEEEEE--eC-CEEEEEEcCCCCC----CCC
Q 007227 362 YMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTE----NRAKFWYSTD--YG-MFRFCIADTEQDW----REG 430 (612)
Q Consensus 362 ~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~----~~~~~yYsfd--~G-~v~Fi~LDT~~~~----~~g 430 (612)
+++++||||.... ..+. .-...++.+ ..... +.+. .| .+.|+.+.-.... ..+
T Consensus 81 v~~i~GNHD~~~~---~~~~------------~~~~~~~~~~~~~~~~~~-v~l~~~~G~~v~i~glp~~~~~~~~~~~~ 144 (379)
T 3tho_B 81 VVVLPGNQDWKGL---KLFG------------NFVTSISSDITFVMSFEP-VDVEAKRGQKVRILPFPYPDESEALRKNE 144 (379)
T ss_dssp EEECCCTTSCTTH---HHHH------------HHHHTTCSSEEECCSSCC-EEEECTTCCEEEEEEECCCCCC----CHH
T ss_pred EEEEcCCCccccC---cccc------------ccccccCCcceeecccce-EEEEcCCCCEEEEEECCCCCHHHHhhhhc
Confidence 9999999995310 0000 000001100 00011 1222 23 4777777543221 123
Q ss_pred HHHHHHHHHHHhhc---cCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceee
Q 007227 431 TEQYRFIEHCLASV---DRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERI 506 (612)
Q Consensus 431 ~~Q~~WL~~~L~~~---~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt 506 (612)
.++.+|+.+.|+.. ......+.|+++|.++ .........+.... ..+...+...++|+++.||.|..+..
T Consensus 145 ~~~~~~l~~~l~~~~~~~~~~~~~~I~l~H~~v-~g~~~~~~se~~~~-----~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 145 GDFRFFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGYAGIEQGRE-----IIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCSSEEEEEEESCB-SCCCC-------CS-----CCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred cchHHHHHHHHHHHHHHhcCCCCCeEEEEeccc-cCCccCCCCccccc-----cccCHHHcCcCCCEEEcccccCCeEe
Confidence 57789999988721 1124567899999987 32211001111000 01111222468999999999998654
No 20
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=98.99 E-value=2.9e-09 Score=106.48 Aligned_cols=151 Identities=17% Similarity=0.262 Sum_probs=85.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+|++++||+|.. ...+++++++..++|.|+++||++.. |... .+..+.+..+. +++.+.
T Consensus 4 mri~~isDiHg~---------------~~~l~~~l~~~~~~d~ii~~GDl~~~-g~~~--~~~~~~l~~~~---~~~~v~ 62 (246)
T 3rqz_A 4 MRILIISDVHAN---------------LVALEAVLSDAGRVDDIWSLGDIVGY-GPRP--RECVELVRVLA---PNISVI 62 (246)
T ss_dssp CCEEEECCCTTC---------------HHHHHHHHHHHCSCSEEEECSCCSSS-SSCH--HHHHHHHHHHC---SSEECC
T ss_pred cEEEEEeecCCC---------------HHHHHHHHHhccCCCEEEECCCcCCC-CCCH--HHHHHHHHhcC---CCEEEe
Confidence 799999999842 23456666665589999999999943 3221 23333443332 258999
Q ss_pred CCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhhccC
Q 007227 367 GNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLASVDR 446 (612)
Q Consensus 367 GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~~~r 446 (612)
||||...... +.. ..+. ........|. ......++.+||++.......
T Consensus 63 GNhD~~~~~~---~~~------------~~~~-~~~~~~~~~~----------------~~~l~~~~~~~L~~lp~~~~~ 110 (246)
T 3rqz_A 63 GNHDWACIGR---LSL------------DEFN-PVARFASYWT----------------TMQLQAEHLQYLESLPNRMID 110 (246)
T ss_dssp CHHHHHHTCC---CCC------------C--C-GGGGCHHHHH----------------HHHCCHHHHHHHHHCCSEEEE
T ss_pred CchHHHHhcc---CCc------------cccC-HHHHHHHHHH----------------HHHcCHHHHHHHHhCCcEEEE
Confidence 9999752110 000 0000 0000000000 012346889999864433221
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
. .|++.|.++ .+... .... . ...+..+|.++++|++|+||+|.-
T Consensus 111 -~---~i~~~Hg~p-~~~~~-----~~~~-~--~~~~~~~l~~~~~~l~i~GHtH~p 154 (246)
T 3rqz_A 111 -G---DWTVVHGSP-RHPIW-----EYIY-N--ARIAALNFPAFDTPLCFVGHTHVP 154 (246)
T ss_dssp -T---TEEEESSCS-SSTTT-----CCCC-S--HHHHHHHGGGCCSSEEECCSSSSE
T ss_pred -C---CEEEEECCc-CCccc-----cccC-C--hHHHHHHHhccCCCEEEECCcCcc
Confidence 1 467778766 43210 1111 1 457788899999999999999974
No 21
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=98.95 E-value=8e-09 Score=105.04 Aligned_cols=216 Identities=15% Similarity=0.178 Sum_probs=114.0
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
..|++++||+|.+ ...+++++++. .++|.|+++||++.. |... .+..+.++.+ .|++
T Consensus 11 ~~~i~~iSDiHg~---------------~~~l~~vl~~~~~~~~D~ii~~GDlv~~-g~~~--~~~~~~l~~~---~~~~ 69 (270)
T 3qfm_A 11 MTKIALLSDIHGN---------------TTALEAVLADARQLGVDEYWLLGDILMP-GTGR--RRILDLLDQL---PITA 69 (270)
T ss_dssp CEEEEEECCCTTC---------------HHHHHHHHHHHHHTTCCEEEECSCCSSS-SSCS--HHHHHHHHTS---CEEE
T ss_pred ccEEEEEecCCCC---------------HHHHHHHHHHHHhcCCCEEEEcCCCCCC-CCCH--HHHHHHHHcc---CCEE
Confidence 3899999999853 22334444332 479999999999943 3221 3444555443 3789
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhh
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~ 443 (612)
++.||||...... .. +.++ +..|. ..+.+ . ...........+|++||++.-..
T Consensus 70 ~v~GNhD~~~~~~---~~-----~~~~------~~~~~----~~~~~----~-----~~~~~~~~L~~~~~~~L~~LP~~ 122 (270)
T 3qfm_A 70 RVLGNWEDSLWHG---VR-----KELD------STRPS----QRYLL----R-----QCQYVLEEISLEEIEVLHNQPLQ 122 (270)
T ss_dssp ECCCHHHHHHHHH---HT-----TCSC------TTSHH----HHHHH----H-----HHHHHHTTSCHHHHHHHHSCCSE
T ss_pred EEcCChHHHHHHh---hc-----cccC------CCcHH----HHHHH----H-----HHHHHHHHcCHHHHHHHHhCCCc
Confidence 9999999742100 00 0000 00000 00000 0 00000012357889998864333
Q ss_pred ccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCcccc
Q 007227 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYK 523 (612)
Q Consensus 444 ~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~ 523 (612)
....-....|++.|..+ .+. + . +.-..... .+.+..++.+.++|++|+||+|.-....
T Consensus 123 ~~~~~~g~~i~lvHg~p-~~~--~-~-~~~~~~~~-~~~l~~~~~~~~~d~~i~GHtH~~~~~~---------------- 180 (270)
T 3qfm_A 123 IHRQFGDLTVGISHHLP-DKN--W-G-RELIHTGK-QEEFDRLVTHPPCDIAVYGHIHQQLLRY---------------- 180 (270)
T ss_dssp EEEEETTEEEEEESSBT-TBS--S-S-STTSTTCC-HHHHHHTTTTTTCSEEECCSSCSEEEEE----------------
T ss_pred eEEEECCcEEEEEECCC-CCC--C-C-ceecCCCc-HHHHHHHhcccCCCEEEECCcCchHhee----------------
Confidence 21111235677778654 221 1 0 00000111 4577888888899999999999633221
Q ss_pred CCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCCeEEEEEEE
Q 007227 524 GSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 524 ~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~L~~~~~~ 578 (612)
..++..+|-.|+.|.....-+ .. . .+..-.|+.+++.++..+.++|++
T Consensus 181 -~~~~~~~iNpGSvg~pr~~~~--~~--~--~~~~asyaild~~~~~~~~v~~~r 228 (270)
T 3qfm_A 181 -GTGGQLIVNPGSIGQPFFLDA--QL--R--KDLRAQYMILEFDDKGLVDMDFRR 228 (270)
T ss_dssp -CTTSCEEEEECCSSSCCCSST--TG--G--GCCCEEEEEEEEETTEEEEEEEEE
T ss_pred -ccCCEEEEECCCccCCCCCCc--cc--c--CCCCCEEEEEEecCCCceEEEEEE
Confidence 014677888999887642211 00 0 012457889998433335777764
No 22
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.89 E-value=3e-08 Score=95.40 Aligned_cols=61 Identities=21% Similarity=0.380 Sum_probs=42.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~ 364 (612)
+|++++||+|.. ...++++++.. .++|+|+++||++.. +..+.++.+ ..|+++
T Consensus 26 m~i~~iSD~Hg~---------------~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~ 80 (190)
T 1s3l_A 26 MKIGIMSDTHDH---------------LPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIA 80 (190)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEE
T ss_pred eEEEEEeeCCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEE
Confidence 899999999832 12233433332 689999999999831 234444433 579999
Q ss_pred ccCCCccC
Q 007227 365 ASGNHERD 372 (612)
Q Consensus 365 ~~GNHD~~ 372 (612)
++||||..
T Consensus 81 V~GNhD~~ 88 (190)
T 1s3l_A 81 TYGNNDGE 88 (190)
T ss_dssp ECCTTCCC
T ss_pred EeCCCcch
Confidence 99999974
No 23
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.70 E-value=2e-08 Score=96.73 Aligned_cols=149 Identities=17% Similarity=0.240 Sum_probs=82.7
Q ss_pred eEEEEEecCCCCCCCCC--CcccccccChHHHHHHHHHh-cCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGS--NEYNNFQRGSLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~--~~~~~~~~~s~~~~~~l~~~-~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
+|++++||+|.+..... ..+..+ ....+.+.+.+++ ..++|+|+++||++.. + ..+....+.++.+ ..|++
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~-~--~~~~~~~~~l~~l--~~~~~ 75 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRF-KGFEIVILTNLLKVLKPEDTLYHLGDFTWH-F--NDKNEYLRIWKAL--PGRKI 75 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCC-TTHHHHHHHHHHTTCCTTCEEEECSCCBSC-S--CCTTSHHHHHHHS--SSEEE
T ss_pred cEEEEEeccccCCCccccccCCCCH-HHHHHHHHHHHHHhCCCCCEEEECCCCCCC-c--hhHHHHHHHHHHC--CCCEE
Confidence 68999999997542100 001010 1112223333332 2579999999999954 3 1222334444433 24899
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEcCCCCCCCCHHHHHHHHHHHhh
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIADTEQDWREGTEQYRFIEHCLAS 443 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LDT~~~~~~g~~Q~~WL~~~L~~ 443 (612)
.++||||.... .+... |-+ +. +..||+ +
T Consensus 76 ~v~GNhD~~~~-----------------~~~~~-----------~~~----------l~----------~~~~l~----~ 103 (195)
T 1xm7_A 76 LVMGNHDKDKE-----------------SLKEY-----------FDE----------IY----------DFYKII----E 103 (195)
T ss_dssp EECCTTCCCHH-----------------HHTTT-----------CSE----------EE----------SSEEEE----E
T ss_pred EEeCCCCCchh-----------------hhhhh-----------hhc----------hh----------HHHHHH----h
Confidence 99999997410 00000 100 00 111221 1
Q ss_pred ccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEeccccccee
Q 007227 444 VDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYER 505 (612)
Q Consensus 444 ~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~YeR 505 (612)
. ..++|++.|.|+ +..... .+ ....+.+..++.++++|++|+||+|....
T Consensus 104 ~----~~~~i~~~H~~~-~~~~~~-----~~--~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 104 H----KGKRILLSHYPA-KDPITE-----RY--PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp E----TTEEEEEESSCS-SCSSCC-----SC--HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred c----CCcEEEEEccCC-cCCCcc-----cc--cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 1 235799999987 543211 11 12367888999999999999999998654
No 24
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.67 E-value=3.6e-07 Score=86.90 Aligned_cols=64 Identities=14% Similarity=0.163 Sum_probs=40.9
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeEEcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~~~~ 366 (612)
+|++++||+|.... . ....+.++++. .++|+|+++||++.. +..+.++.+ ..|++.+.
T Consensus 23 mri~~iSD~Hg~~~-----~----~~l~~~l~~~~---~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V~ 80 (178)
T 2kkn_A 23 KRFLLISDSHVPVR-----M----ASLPDEILNSL---KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGVH 80 (178)
T ss_dssp EEEEEECCCCBTTT-----T----CCCCHHHHHGG---GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEECC
T ss_pred eEEEEEecccCCCC-----H----HHHHHHHHHHh---cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEE
Confidence 79999999994211 0 01112233322 579999999999841 233334333 26999999
Q ss_pred CCCccC
Q 007227 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 81 GNhD~~ 86 (178)
T 2kkn_A 81 GNMDYP 86 (178)
T ss_dssp CSSSCG
T ss_pred CCCCcH
Confidence 999963
No 25
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=98.65 E-value=7.1e-07 Score=96.16 Aligned_cols=87 Identities=11% Similarity=0.188 Sum_probs=53.6
Q ss_pred CCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCc-ccHHHHHHHhhhcc---
Q 007227 283 QDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPI--- 356 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~-~~~wd~f~~~i~~l--- 356 (612)
....+||++++|+|.+....... ........++++++. ..+||+||++||++..... ......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~ 105 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAV---RGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMG 105 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBC
T ss_pred CCCCEEEEEEeccCCCCcccccc---hhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhcc
Confidence 34569999999999875421110 011123344554432 2689999999999854332 22334444444432
Q ss_pred -------------------------------ccCCCeEEccCCCccC
Q 007227 357 -------------------------------ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 -------------------------------~~~vP~~~~~GNHD~~ 372 (612)
...+|++++.||||..
T Consensus 106 ~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 106 DRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp SSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred CCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 2379999999999974
No 26
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.64 E-value=2.7e-07 Score=96.33 Aligned_cols=82 Identities=13% Similarity=0.248 Sum_probs=51.3
Q ss_pred eEEEEEecCCCCCCCCCCccccc--ccChHHHHHHHHHh--cCCCCEEEEcCccccCCC-cccHHHHHHHhhhcccc-CC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNF--QRGSLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIAS-TV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~--~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g-~~~~wd~f~~~i~~l~~-~v 360 (612)
+||++++|+|.+... +... .......++++++. ..++|+|+++||+++... ....+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQ----FHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcc----cCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 589999999987421 1000 00111334444432 268999999999985432 22344556666666543 68
Q ss_pred CeEEccCCCccC
Q 007227 361 PYMIASGNHERD 372 (612)
Q Consensus 361 P~~~~~GNHD~~ 372 (612)
|+++++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999974
No 27
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=98.57 E-value=3e-06 Score=90.89 Aligned_cols=258 Identities=14% Similarity=0.149 Sum_probs=121.4
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcc-cHHHHHHHhhhc-----
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEP----- 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~-~~wd~f~~~i~~----- 355 (612)
...+||++++|+|.+....... ........++++++. ..++|+|+++||++...... .....+++.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~ 87 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 87 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEEcCCCCCcccccc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 3459999999999875421110 111123345554443 26899999999998543221 122233333322
Q ss_pred -------c----------------------ccCCCeEEccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCc
Q 007227 356 -------I----------------------ASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAK 406 (612)
Q Consensus 356 -------l----------------------~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~ 406 (612)
+ ...+|++++.||||..... .+....+-..+.+. -..|.- ....++
T Consensus 88 ~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~--~~~s~~~lL~~~g~--v~l~g~-~~~~~~ 162 (417)
T 4fbw_A 88 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD--GRYSALDILQVTGL--VNYFGR-VPENDN 162 (417)
T ss_dssp CCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-------CCCHHHHHHHTTS--CEECCC-CC---C
T ss_pred CcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccc--ccccHHHHhccCCe--EEEeCC-cccCCc
Confidence 2 2379999999999974211 00000000000000 001100 000000
Q ss_pred e---EEEEEeCC--EEEEEEcCCCCCCCCHHH-HHHHHHHHhhc-cC---CCCCeEEEEEccccccCCCCCccCCCCccc
Q 007227 407 F---WYSTDYGM--FRFCIADTEQDWREGTEQ-YRFIEHCLASV-DR---QKQPWLIFLAHRVLGYSSDLSYAVEGSFAE 476 (612)
Q Consensus 407 ~---yYsfd~G~--v~Fi~LDT~~~~~~g~~Q-~~WL~~~L~~~-~r---~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~ 476 (612)
. -..+.-|. +.+..+.-.. .+. .+++.+..... .. ....+.|++.|... ... +.. .+.
T Consensus 163 i~~~pv~l~~g~~~valyG~~~~~-----d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~-~~~----~~~-~yi- 230 (417)
T 4fbw_A 163 IVVSPILLQKGFTKLALYGISNVR-----DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNH-SAH----TPT-SYL- 230 (417)
T ss_dssp EEECCEEEEETTEEEEEEEECCCC-----HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCS-SCS----SSS-SSC-
T ss_pred eeEEeEEEEecCceEEEEeccCCc-----hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCc-cCC----CCc-ccC-
Confidence 0 01233443 4445554322 121 13333222211 11 23567899999876 221 111 111
Q ss_pred hhhHHHHHHHHHhCCCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeee
Q 007227 477 PMGRESLQKLWQKYKVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRD 556 (612)
Q Consensus 477 ~~~r~~l~~ll~k~~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~ 556 (612)
+ + -+...++|+++.||.|..+...-. + ..+++..+-.|+.... .+ +.-..
T Consensus 231 p---~----~l~~~~~DyvalGH~H~~~~~~~~-~-------------~~~g~~i~~PGS~~~~--s~-------~e~E~ 280 (417)
T 4fbw_A 231 P---E----SFIQDFYDFVLWGHEHECLIDGSY-N-------------PTQKFTVVQPGSTIAT--SL-------SPGET 280 (417)
T ss_dssp C---G----GGSCTTCSEEEEESCCSCEEEEEE-E-------------TTTTEEEEECCCSSCS--SC-------CHHHH
T ss_pred c---h----hHhhcCCCEEEecCccccceeccc-c-------------CCCCEEEEECCCCCcC--CC-------ccccC
Confidence 1 1 133568999999999997654210 0 1134443444443211 11 10012
Q ss_pred CCceEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEe
Q 007227 557 YDHGFVKLTAFDHSNLLFEYKKSRDGK--VYDSFRISR 592 (612)
Q Consensus 557 ~~~Gy~~l~v~n~~~L~~~~~~~~dG~--v~D~f~i~k 592 (612)
...||..|++ ++..+.++++.-..-. +..++.+..
T Consensus 281 ~~kg~~lvei-~~~~~~~e~i~l~~~Rpf~~~~v~L~~ 317 (417)
T 4fbw_A 281 APKHCGILNI-TGKDFHLEKIRLRTVRPFIMKDIILSE 317 (417)
T ss_dssp SCCEEEEEEE-ETTEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CCCEEEEEEE-ECCEEEEEEEECCCcccEEEEEEEeec
Confidence 4679999999 5678999988644433 455554433
No 28
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=98.54 E-value=2e-06 Score=93.13 Aligned_cols=86 Identities=15% Similarity=0.212 Sum_probs=51.8
Q ss_pred CCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHh--cCCCCEEEEcCccccCCCcc-cHHHHHHHhhhc-----
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQD--LKNIDIVFHIGDICYANGYI-SQWDQFTAQIEP----- 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~--~~~pdfvl~~GDi~Y~~g~~-~~wd~f~~~i~~----- 355 (612)
...+||++++|+|.+....... ........++++++. ..+||+||++||++...... .....+++.++.
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~ 150 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 150 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEecccCCCcccCcc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 4459999999999875421100 011123344555443 26899999999998543221 222233333322
Q ss_pred -------c----------------------ccCCCeEEccCCCccC
Q 007227 356 -------I----------------------ASTVPYMIASGNHERD 372 (612)
Q Consensus 356 -------l----------------------~~~vP~~~~~GNHD~~ 372 (612)
+ ...+|++++.||||..
T Consensus 151 ~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 151 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred CcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 2379999999999974
No 29
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.18 E-value=4.9e-06 Score=92.08 Aligned_cols=200 Identities=15% Similarity=0.072 Sum_probs=89.9
Q ss_pred ceEEEEEecCCCCCCCCCCcccccccChH-HHHHHHHHhc--CCC-CEEEEcCccccCCCcc--cHHHHHHHhhhccccC
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNNFQRGSL-NTTRQLIQDL--KNI-DIVFHIGDICYANGYI--SQWDQFTAQIEPIAST 359 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~s~-~~~~~l~~~~--~~p-dfvl~~GDi~Y~~g~~--~~wd~f~~~i~~l~~~ 359 (612)
.++|++++|+|....... ...+....+ ..++++.++. .++ ++++.+||++...... ...+...+.+..+ .
T Consensus 8 ~l~Il~~~D~H~~~~~~~--~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l--g 83 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNE--YGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV--G 83 (516)
T ss_dssp EEEEEEECCCTTCCSCCT--TSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH--T
T ss_pred EEEEEEecccccCccCCC--CCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc--C
Confidence 489999999997532100 000110011 1223332221 145 7999999998322110 1112233333333 2
Q ss_pred CCeEEccCCCccCCCCCCCCCCCCCCCCcccccccc-ccccCCCC--CCceEEEEEeCC--EEEEEEcCCCC--CC-C--
Q 007227 360 VPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN-MFYVPTEN--RAKFWYSTDYGM--FRFCIADTEQD--WR-E-- 429 (612)
Q Consensus 360 vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~-~f~~P~~~--~~~~yYsfd~G~--v~Fi~LDT~~~--~~-~-- 429 (612)
. -++++||||+++... .+... ..+.+.++.. .......+ ..+.|.-++.++ +.|+.+.+... +. +
T Consensus 84 ~-d~~~~GNHEfd~g~~--~l~~~--~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~ 158 (516)
T 1hp1_A 84 Y-DAMAIGNHEFDNPLT--VLRQQ--EKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEY 158 (516)
T ss_dssp C-CEEECCGGGGSSCHH--HHHHH--HHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCS
T ss_pred C-CEEeeccccccCCHH--HHHHH--HhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCc
Confidence 2 367899999974210 00000 0000001000 00000000 113455678887 55666655431 11 1
Q ss_pred --------C-HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEeccc
Q 007227 430 --------G-TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHV 500 (612)
Q Consensus 430 --------g-~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~ 500 (612)
. ..-.+|+++ |++. .+...+|++.|.|. ..... .+.. . .. ...+...+...+||++|+||.
T Consensus 159 ~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~-~~~~~-~~~~--~--~~-~~~la~~~~~~~iDlilgGHt 228 (516)
T 1hp1_A 159 FTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGH-YDNGE-HGSN--A--PG-DVEMARALPAGSLAMIVGGHS 228 (516)
T ss_dssp CTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCC-CGGGC-CTTS--C--CC-HHHHHHHSCTTSSSEEECCSS
T ss_pred cCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCc-cCCCc-cccc--C--ch-HHHHHHhCCCCceeEEECCCC
Confidence 0 112334333 4321 25678999999997 32211 1100 0 11 223433333456999999999
Q ss_pred ccce
Q 007227 501 HNYE 504 (612)
Q Consensus 501 H~Ye 504 (612)
|...
T Consensus 229 H~~~ 232 (516)
T 1hp1_A 229 QDPV 232 (516)
T ss_dssp CCBC
T ss_pred Cccc
Confidence 9854
No 30
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.17 E-value=1.2e-05 Score=89.80 Aligned_cols=189 Identities=14% Similarity=0.049 Sum_probs=90.4
Q ss_pred CceEEEEEecCCCCCCCCCCcccc--cc--cChHHHHHHHHHh--cCCCC-EEEEcCccccCCCccc--HHHHHHHhhhc
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNN--FQ--RGSLNTTRQLIQD--LKNID-IVFHIGDICYANGYIS--QWDQFTAQIEP 355 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~--~~--~~s~~~~~~l~~~--~~~pd-fvl~~GDi~Y~~g~~~--~wd~f~~~i~~ 355 (612)
..++|++++|+|..-... .|.. .. .+....+..++++ ..++| +++.+||++....... ......+.+..
T Consensus 28 ~~l~Il~~~D~H~~~~~~--~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPV--ELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp CEEEEEEECCCTTCCSCE--EEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred eeEEEEEEcccccCcccc--cccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 359999999999642110 0100 00 0122334444432 13577 8899999984321110 11122233332
Q ss_pred cccCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccccc-ccccCC----CCCCceEEEEEeCC--EEEEEEcCCCC--
Q 007227 356 IASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN-MFYVPT----ENRAKFWYSTDYGM--FRFCIADTEQD-- 426 (612)
Q Consensus 356 l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~-~f~~P~----~~~~~~yYsfd~G~--v~Fi~LDT~~~-- 426 (612)
+ . +-+.++||||+++... .+.... .+.+.++.. ...... ....+.|.-++.++ +.|+.+.+...
T Consensus 106 l--g-~d~~~lGNHEfd~g~~-~l~~~l---~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~ 178 (552)
T 2z1a_A 106 L--R-YRAMALGNHEFDLGPG-PLADFL---KGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTRE 178 (552)
T ss_dssp T--T-CCEEECCGGGGTTCHH-HHHHHH---TTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHH
T ss_pred c--C-CCccccccccccCCHH-HHHHHH---hhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhh
Confidence 2 1 2367899999974210 000000 001111110 000000 00123466778887 55666665421
Q ss_pred C-CC--------CHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEE
Q 007227 427 W-RE--------GTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAV 496 (612)
Q Consensus 427 ~-~~--------g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvl 496 (612)
+ .+ ..++.+.+.+.|++ .+...+|++.|.|. .. + ..+.++ .+||++|
T Consensus 179 ~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~-~~-----------------d--~~la~~~~gvDlIl 235 (552)
T 2z1a_A 179 ISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGY-GE-----------------D--LKLARRLVGVQVIV 235 (552)
T ss_dssp HSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH-HH-----------------H--HHHHTTCSSCCEEE
T ss_pred ccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCc-ch-----------------H--HHHHHhCCCccEEE
Confidence 0 01 12333333444543 35667999999886 10 0 112233 5899999
Q ss_pred eccccccee
Q 007227 497 FGHVHNYER 505 (612)
Q Consensus 497 sGH~H~YeR 505 (612)
+||.|....
T Consensus 236 gGHtH~~~~ 244 (552)
T 2z1a_A 236 GGHSHTLLG 244 (552)
T ss_dssp ECSSCCCBS
T ss_pred eCCcCcccc
Confidence 999998653
No 31
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.10 E-value=0.00011 Score=81.57 Aligned_cols=205 Identities=12% Similarity=0.098 Sum_probs=91.2
Q ss_pred CceEEEEEecCCCCCCCCCCcccc---cccChHHHHHHHHHh--cCCCC-EEEEcCccccCCCcccH--------HHHHH
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNN---FQRGSLNTTRQLIQD--LKNID-IVFHIGDICYANGYISQ--------WDQFT 350 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~---~~~~s~~~~~~l~~~--~~~pd-fvl~~GDi~Y~~g~~~~--------wd~f~ 350 (612)
..++|++++|+|..-... .|.. -..+-+..+..++++ ..+++ +++.+||++.... ... .....
T Consensus 18 ~~l~Il~tnD~Hg~~~~~--~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~-~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPT--DFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSP-FCNYLIAHSGSSQPLV 94 (527)
T ss_dssp CEEEEEEECCCTTCCSSC--CSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSH-HHHHHHHTTCSSHHHH
T ss_pred CcEEEEEEeccCCCccCc--ccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcH-HHHHHhhcccCcchHH
Confidence 349999999999543110 0100 011223344444443 13455 7788999994321 111 12222
Q ss_pred HhhhccccCCCeEEccCCCccCCCCCC--CCCCCCCCCCccccccc-cccccCCC-CCCceEEEEEeCC--EEEEEEcCC
Q 007227 351 AQIEPIASTVPYMIASGNHERDWPGTG--SFYGNMDSGGECGVLVE-NMFYVPTE-NRAKFWYSTDYGM--FRFCIADTE 424 (612)
Q Consensus 351 ~~i~~l~~~vP~~~~~GNHD~~~~~~~--~~y~~~dsgge~g~~~~-~~f~~P~~-~~~~~yYsfd~G~--v~Fi~LDT~ 424 (612)
+.+..+ ... ++++||||+++.... .+++ +++.++. ........ ...+.|.-++.++ +-||.+.+.
T Consensus 95 ~~ln~l--g~D-~~t~GNHefd~G~~~l~~~~~------~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~ 165 (527)
T 3qfk_A 95 DFYNRM--AFD-FGTLGNHEFNYGLPYLKDTLR------RLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQ 165 (527)
T ss_dssp HHHHHT--CCC-EECCCGGGGTTCHHHHHHHHH------HCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECT
T ss_pred HHHHhc--CCc-EEeccccccccCHHHHHHHHH------hCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccC
Confidence 223222 233 567999998742100 0000 0000000 00000000 0012366678887 456666654
Q ss_pred CC--CCC-----C---HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeE
Q 007227 425 QD--WRE-----G---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDI 494 (612)
Q Consensus 425 ~~--~~~-----g---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vdl 494 (612)
.. +.. + ....+.+++.+++.. .+...+|++.|.+...........+....+.. ...|..-+ ..+||+
T Consensus 166 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~-~~~la~~~-~~giDl 242 (527)
T 3qfk_A 166 FIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE-GYAMLEAF-SKDIDI 242 (527)
T ss_dssp TGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC-HHHHHHHH-GGGCSE
T ss_pred CcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH-HHHHHHhc-CCCCcE
Confidence 31 111 0 122344444444432 35678999999875211100000000001111 11222222 258999
Q ss_pred EEecccccce
Q 007227 495 AVFGHVHNYE 504 (612)
Q Consensus 495 vlsGH~H~Ye 504 (612)
+|+||.|...
T Consensus 243 IlgGHtH~~~ 252 (527)
T 3qfk_A 243 FITGHQHRQI 252 (527)
T ss_dssp EECCSSCCEE
T ss_pred EEECCCCccc
Confidence 9999999854
No 32
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.94 E-value=0.00017 Score=71.97 Aligned_cols=169 Identities=15% Similarity=0.213 Sum_probs=84.8
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccC-CCcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYA-NGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~-~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
+|++++||.=.. ++ ...+..++++. +. |+++..|..+.. .+.. ....+.+.. ..+-.+
T Consensus 1 m~ilfiGDi~g~------------~G-~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~---~~~~~~l~~--~G~D~~ 61 (252)
T 2z06_A 1 MRVLFIGDVMAE------------PG-LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD---RRSYRLLRE--AGVDLV 61 (252)
T ss_dssp CEEEEECCBCHH------------HH-HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC---HHHHHHHHH--HTCCEE
T ss_pred CEEEEEEecCCc------------cc-HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC---HHHHHHHHh--CCCCEE
Confidence 489999998211 11 22333333321 34 888888777632 2332 222222322 234444
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccCCCCCCceEEEEEeCCEEEEEEc--CCCCCCCCHHHHHHHHHHH
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVPTENRAKFWYSTDYGMFRFCIAD--TEQDWREGTEQYRFIEHCL 441 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~yYsfd~G~v~Fi~LD--T~~~~~~g~~Q~~WL~~~L 441 (612)
+.||||++....-.|.+..+ + -.--++|.....+.|.-++.++.++-+++ +......-..-.+-+++.+
T Consensus 62 -T~GNHefD~~~l~~~l~~~~-------~-vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v 132 (252)
T 2z06_A 62 -SLGNHAWDHKEVYALLESEP-------V-VRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLL 132 (252)
T ss_dssp -ECCTTTTSCTTHHHHHHHSS-------E-ECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHH
T ss_pred -EeccEeeECchHHHHhccCC-------c-eEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHH
Confidence 77999998531111111000 0 00012232223456777888886655544 3322111112233456666
Q ss_pred hhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccc
Q 007227 442 ASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNY 503 (612)
Q Consensus 442 ~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Y 503 (612)
++. + .+.+|+.+|.-. .+ + .+.+. .+..-+||+++.||+|..
T Consensus 133 ~~l--k-~d~IIv~~H~g~--ts-----------e---k~~la-~~~dg~Vd~VvGgHTHv~ 174 (252)
T 2z06_A 133 EEE--K-ADYVLVEVHAEA--TS-----------E---KMALA-HYLDGRASAVLGTHTHVP 174 (252)
T ss_dssp HHC--C-CSEEEEEEECSC--HH-----------H---HHHHH-HHHBTTBSEEEEESSCSC
T ss_pred HHh--C-CCEEEEEeCCCc--HH-----------H---HHHHH-HhCCCCeEEEEcCCCCcC
Confidence 654 2 778999999431 10 1 12222 223457999999999984
No 33
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.91 E-value=0.00017 Score=72.20 Aligned_cols=172 Identities=13% Similarity=0.076 Sum_probs=85.1
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCC-CcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
+|++++||.= +. ++ ...++.++++. +. |+++..|+.+... +... ...+.+.. ..+-.
T Consensus 1 m~ilf~GDv~-g~-----------~G-~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~--~G~Da- 60 (255)
T 1t70_A 1 MRVLFIGDVF-GQ-----------PG-RRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALE--AGAGC- 60 (255)
T ss_dssp CEEEEECCBB-HH-----------HH-HHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHH--HTCSE-
T ss_pred CEEEEEeccC-Ch-----------HH-HHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHh--CCCCE-
Confidence 4899999982 11 11 23344444332 33 9999988887432 3321 22222222 13333
Q ss_pred EccCCCccCCCCCCCCCCCCCCCCccccccccccccC-CCCCCceEEEEEeCCEE--EEEEcCCCCCCCCHHHHHHHHHH
Q 007227 364 IASGNHERDWPGTGSFYGNMDSGGECGVLVENMFYVP-TENRAKFWYSTDYGMFR--FCIADTEQDWREGTEQYRFIEHC 440 (612)
Q Consensus 364 ~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P-~~~~~~~yYsfd~G~v~--Fi~LDT~~~~~~g~~Q~~WL~~~ 440 (612)
.+.||||++....-.+.+..+ . .+. .--++| ....++.|.-++.++.+ ++.|-+......-..-.+-+++.
T Consensus 61 ~TlGNHefD~~~l~~~l~~~~----~-~~~-~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~ 134 (255)
T 1t70_A 61 LTLGNHAWHHKDIYPMLSEDT----Y-PIV-RPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDAL 134 (255)
T ss_dssp EECCTTTTSSTTHHHHHHTTC----S-CEE-CCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHH
T ss_pred EEeccccccCchHHHHHhhCC----C-cEE-EEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHH
Confidence 466999998531111111000 0 000 001122 22234566678888754 45554442221112223446666
Q ss_pred HhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 441 LASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 441 L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
+++. +...+|+..|.-. ++ + .+.+.. ...-+||+++.||.|...
T Consensus 135 v~~l---~~d~IIv~~H~e~--t~-----------E---k~~la~-~~dg~vd~VvGgHTHv~~ 178 (255)
T 1t70_A 135 LERD---DLGTVFVDFHAEA--TS-----------E---KEAMGW-HLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp TTCS---SCCEEEEEEECSC--HH-----------H---HHHHHH-HHTTSSSEEEEESSCSCB
T ss_pred HHHh---CCCEEEEEeCCCC--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 6654 5678999999421 00 1 122322 234569999999999843
No 34
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=97.89 E-value=3.8e-05 Score=86.19 Aligned_cols=192 Identities=16% Similarity=0.104 Sum_probs=89.0
Q ss_pred CCceEEEEEecCCCCCCCCCCccc------ccccChHHHHHHHHHhc--CCCC-EEEEcCccccCCCcc--cHHHHHHHh
Q 007227 284 DSLQQVIIFGDMGKDEADGSNEYN------NFQRGSLNTTRQLIQDL--KNID-IVFHIGDICYANGYI--SQWDQFTAQ 352 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~------~~~~~s~~~~~~l~~~~--~~pd-fvl~~GDi~Y~~g~~--~~wd~f~~~ 352 (612)
.-.++|++++|+|..-......|. ....+-+..+..++++. .+++ ++|..||++...... .......+.
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 89 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAV 89 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHH
Confidence 345899999999954221000000 00111233344444331 2455 899999999532111 011222233
Q ss_pred hhccccCCCeEEccCCCccCCCCC--CCCCCCCCCCCccccccc-cccccCCC----CCCceEEEEEeCC--EEEEEEcC
Q 007227 353 IEPIASTVPYMIASGNHERDWPGT--GSFYGNMDSGGECGVLVE-NMFYVPTE----NRAKFWYSTDYGM--FRFCIADT 423 (612)
Q Consensus 353 i~~l~~~vP~~~~~GNHD~~~~~~--~~~y~~~dsgge~g~~~~-~~f~~P~~----~~~~~yYsfd~G~--v~Fi~LDT 423 (612)
|..+ ..- ++++||||+++... ..+++ +++.|+. ........ ..-+.|--++.++ +-||.+.+
T Consensus 90 ln~l--g~D-~~tlGNHEfd~G~~~l~~~~~------~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~ 160 (579)
T 3ztv_A 90 MNAG--NFH-YFTLGNHEFDAGNEGLLKLLE------PLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDT 160 (579)
T ss_dssp HHHH--TCS-EEECCSGGGTTHHHHHHHHHT------TCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEEC
T ss_pred HHhc--CcC-eeeccccccccCHHHHHHHHH------hcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEc
Confidence 3322 223 46799999874210 00010 0001110 00000000 0113456678887 45666644
Q ss_pred -CC-----CCCCC---HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCe
Q 007227 424 -EQ-----DWREG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVD 493 (612)
Q Consensus 424 -~~-----~~~~g---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vd 493 (612)
.. ....+ ....+-+++.+++........+|++.|.+. - . ... +.++ .+||
T Consensus 161 ~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~-~--------------~--d~~---la~~~~giD 220 (579)
T 3ztv_A 161 VNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGS-E--------------K--NIE---IAQKVNDID 220 (579)
T ss_dssp SHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCH-H--------------H--HHH---HHHHCSSCC
T ss_pred CCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc-h--------------h--hHH---HHHhCCCCC
Confidence 10 00011 122344455544443244678999999775 0 0 112 2222 4799
Q ss_pred EEEecccccce
Q 007227 494 IAVFGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|+||.|...
T Consensus 221 lIlgGHtH~~~ 231 (579)
T 3ztv_A 221 VIVTGDSHYLY 231 (579)
T ss_dssp EEEECSSCCEE
T ss_pred EEEeCCCCccc
Confidence 99999999865
No 35
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=97.88 E-value=9.1e-05 Score=81.78 Aligned_cols=204 Identities=12% Similarity=0.060 Sum_probs=90.1
Q ss_pred ceEEEEEecCCCCCCCCCCcccc---cccChHHHHHHHHHh--cCCCCEEEE-cCccccCCCcc--cHHHHHHHhhhccc
Q 007227 286 LQQVIIFGDMGKDEADGSNEYNN---FQRGSLNTTRQLIQD--LKNIDIVFH-IGDICYANGYI--SQWDQFTAQIEPIA 357 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~---~~~~s~~~~~~l~~~--~~~pdfvl~-~GDi~Y~~g~~--~~wd~f~~~i~~l~ 357 (612)
.++|+.++|+|..-......|.. -..+.+..+..++++ ..+++.+++ +||++...... .......+.+..+
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~~~~~~~~g~~~~~~ln~l- 84 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGPYISSLTKGKAIIDIMNTM- 84 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHTTTTHHHHHHHTTS-
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCchhhhhcCChHHHHHHHhc-
Confidence 48999999999543211000100 011223444444443 146776655 99998422110 1112223333222
Q ss_pred cCCCeEEccCCCccCCCCC--CCCCCCCCCCCccccccc-cccccCC-CC--CCceEEEEEeCC--EEEEEEcCCC----
Q 007227 358 STVPYMIASGNHERDWPGT--GSFYGNMDSGGECGVLVE-NMFYVPT-EN--RAKFWYSTDYGM--FRFCIADTEQ---- 425 (612)
Q Consensus 358 ~~vP~~~~~GNHD~~~~~~--~~~y~~~dsgge~g~~~~-~~f~~P~-~~--~~~~yYsfd~G~--v~Fi~LDT~~---- 425 (612)
-+-++++||||+++... ..++. +++.|+- ....... .. ..+.|.-++.++ +-|+.+-+..
T Consensus 85 --g~D~~tlGNHEfd~G~~~l~~~l~------~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~~ 156 (509)
T 3ive_A 85 --PFDAVTIGNHEFDHGWDNTLLQLS------QAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFND 156 (509)
T ss_dssp --CCSEECCCGGGGTTCHHHHHHHHT------TCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHHH
T ss_pred --CCcEEeecccccccCHHHHHHHHh------hCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCccccc
Confidence 23356789999875210 00010 0001100 0000000 00 023356678888 4556664321
Q ss_pred -CCC---CC---HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEe
Q 007227 426 -DWR---EG---TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVF 497 (612)
Q Consensus 426 -~~~---~g---~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~Vdlvls 497 (612)
.+. .+ ....+.+++.+++.. .+...+|++.|.++.+..... ......... +.-..+.++ .+||++|+
T Consensus 157 ~~~~~~~~g~~~~d~~~~~~~~v~~Lk-~~~D~iIvl~H~G~~~~~~~~--~~~~~~~~~--~~d~~la~~~~giDlIlg 231 (509)
T 3ive_A 157 TVSAATRVGIEARDEIKWLQRYIDELK-GKVDLTVALIHEGVPARQSSM--GGTDVRRAL--DKDIQTASQVKGLDILIT 231 (509)
T ss_dssp HSCGGGCTTEEECCHHHHHHHHHHHHT-TTCSEEEEEEECSSCCCCCCC-----CCCCCC--HHHHHHHHHCSSCCEEEE
T ss_pred ccccccCCCCEEcCHHHHHHHHHHHHH-hcCCEEEEEeccCcCCccccc--ccccccccc--chHHHHHhcCCCCcEEEe
Confidence 010 11 223445555555443 237789999998752221110 000000001 111233344 37999999
Q ss_pred cccccc
Q 007227 498 GHVHNY 503 (612)
Q Consensus 498 GH~H~Y 503 (612)
||.|..
T Consensus 232 GHtH~~ 237 (509)
T 3ive_A 232 GHAHVG 237 (509)
T ss_dssp ESSCCC
T ss_pred CCcCcc
Confidence 999963
No 36
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=97.88 E-value=4.7e-05 Score=84.81 Aligned_cols=191 Identities=13% Similarity=0.093 Sum_probs=90.4
Q ss_pred CceEEEEEecCCCCCCCCCCcccc------cccChHHHHHHHHHhc--CCC-CEEEEcCccccCCCccc--HHHHHHHhh
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNN------FQRGSLNTTRQLIQDL--KNI-DIVFHIGDICYANGYIS--QWDQFTAQI 353 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~------~~~~s~~~~~~l~~~~--~~p-dfvl~~GDi~Y~~g~~~--~wd~f~~~i 353 (612)
..++|++++|+|..-.. ...+.. -..+.+..+..++++. .++ +++|.+||++....... ......+.+
T Consensus 24 ~~l~Il~~nD~Hg~~~~-~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQ-TSEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp EEEEEEEECCCTTCCSC-BCTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred eEEEEEEecccccCCcc-cccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 35999999999954221 000000 0011233344444331 244 69999999994322111 112223333
Q ss_pred hccccCCCeEEccCCCccCCCCC--C-CCCCCCCCCCccccccc-cccc-----cCC-CCCCceEEEEEeCCEE--EEEE
Q 007227 354 EPIASTVPYMIASGNHERDWPGT--G-SFYGNMDSGGECGVLVE-NMFY-----VPT-ENRAKFWYSTDYGMFR--FCIA 421 (612)
Q Consensus 354 ~~l~~~vP~~~~~GNHD~~~~~~--~-~~y~~~dsgge~g~~~~-~~f~-----~P~-~~~~~~yYsfd~G~v~--Fi~L 421 (612)
..+ ... +.++||||+++... . .++. +++.++. .... -|. ....+.|.-++.++++ ||.+
T Consensus 103 n~l--g~d-~~~~GNHEfd~g~~~l~~~~~~------~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~ 173 (546)
T 4h2g_A 103 NAL--RYD-AMALGNHEFDNGVEGLIEPLLK------EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGY 173 (546)
T ss_dssp HHH--TCS-EEECCGGGGTTHHHHHHTTTTT------TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEE
T ss_pred Hhc--CCc-EEeccCcccccCHHHHHHHHHh------hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEe
Confidence 332 233 57799999974210 0 1111 1111110 0000 000 0012346667888854 5566
Q ss_pred cCCCC--C-CCC-----HHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCe
Q 007227 422 DTEQD--W-REG-----TEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVD 493 (612)
Q Consensus 422 DT~~~--~-~~g-----~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~Vd 493 (612)
.+... + .++ ....+.+++.+++........+|++.|.+. . . ...+...+ .+||
T Consensus 174 ~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~-~---------------~-d~~la~~~--~giD 234 (546)
T 4h2g_A 174 TSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGF-E---------------M-DKLIAQKV--RGVD 234 (546)
T ss_dssp ECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCH-H---------------H-HHHHHHHS--TTCC
T ss_pred cccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCc-c---------------c-hHHHHHhC--CCCc
Confidence 54321 0 111 122344444444432235678999999875 1 0 11222111 4799
Q ss_pred EEEecccccce
Q 007227 494 IAVFGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|+||.|...
T Consensus 235 lIlgGHtH~~~ 245 (546)
T 4h2g_A 235 VVVGGHSNTFL 245 (546)
T ss_dssp EEECCSSCCCC
T ss_pred EEEeCCcCccc
Confidence 99999999853
No 37
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=97.76 E-value=0.00035 Score=78.01 Aligned_cols=75 Identities=12% Similarity=0.136 Sum_probs=42.6
Q ss_pred eEEEEEeCC--EEEEEEcCCC-----------C--CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCC
Q 007227 407 FWYSTDYGM--FRFCIADTEQ-----------D--WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVE 471 (612)
Q Consensus 407 ~yYsfd~G~--v~Fi~LDT~~-----------~--~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~ 471 (612)
.|.-++.++ +.||.+.+.. . +....++.+-+.+.|++ .+...+|++.|.|+ ..
T Consensus 201 py~i~e~~G~kIgiiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~---~~~d~iIvLsH~g~-~~-------- 268 (562)
T 2wdc_A 201 AYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARA---EGANAVVLLSHNGM-QL-------- 268 (562)
T ss_dssp SEEEEEETTEEEEEEEECCTTHHHHSCGGGGTTEECCCCHHHHHHHHHHHHH---TTCSEEEEEECSCH-HH--------
T ss_pred CeEEEEECCeEEEEEeeccCcccccccccccCCcEEeCHHHHHHHHHHHHHH---CCCCEEEEEeCCCC-cc--------
Confidence 355677887 5566665432 1 11112333222333443 35678999999886 10
Q ss_pred CCccchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007227 472 GSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 472 ~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
. + .+.++ .+||++|+||.|...
T Consensus 269 -----d--~----~la~~~~giDlIlgGHtH~~~ 291 (562)
T 2wdc_A 269 -----D--A----ALAERIRGIDLILSGHTHDLT 291 (562)
T ss_dssp -----H--H----HHHTTSSSCCEEEECSSCCCC
T ss_pred -----h--H----HHHhcCCCCcEEEeCCCCCCC
Confidence 0 1 23333 489999999999853
No 38
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=97.63 E-value=7.8e-05 Score=72.37 Aligned_cols=83 Identities=11% Similarity=0.228 Sum_probs=44.9
Q ss_pred ccccceEEEEcCCCCCCCCceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCc--
Q 007227 267 YIWSSEYQFKASPYPGQDSLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGY-- 342 (612)
Q Consensus 267 ~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~-- 342 (612)
..|+....|.+.. -+|++++||+|.. ...++++++.. .++|+|+++||++.....
T Consensus 12 ~~~~~~~~~~~~~------mmki~~iSD~H~~---------------~~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~ 70 (208)
T 1su1_A 12 DLGTENLYFQSNA------MMKLMFASDIHGS---------------LPATERVLELFAQSGAQWLVILGDVLNHGPRNA 70 (208)
T ss_dssp -------------------CCEEEEECCCTTB---------------HHHHHHHHHHHHHHTCSEEEECSCCSCCCTTSC
T ss_pred ccCcccceecccc------cEEEEEEEcCCCC---------------HHHHHHHHHHHHhcCCCEEEECCCccccCcccc
Confidence 3456666664422 2799999999853 12333443322 579999999999953221
Q ss_pred -ccH--HHHHHHhhhccccCCCeEEccCCCccC
Q 007227 343 -ISQ--WDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 343 -~~~--wd~f~~~i~~l~~~vP~~~~~GNHD~~ 372 (612)
... -.+..+.++.+. .|+++++||||..
T Consensus 71 ~~~~~~~~~~~~~l~~~~--~~v~~V~GNHD~~ 101 (208)
T 1su1_A 71 LPEGYAPAKVVERLNEVA--HKVIAVRGNCDSE 101 (208)
T ss_dssp CCTTBCHHHHHHHHHTTG--GGEEECCCTTCCH
T ss_pred cccccCHHHHHHHHHhcC--CceEEEECCCchH
Confidence 111 134455554432 5899999999974
No 39
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=97.55 E-value=0.0011 Score=67.35 Aligned_cols=171 Identities=15% Similarity=0.074 Sum_probs=87.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccCh---HHHHHHHHHhcCCCCEEEEcCccccCC-CcccHHHHHHHhhhccccCCCe
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGS---LNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s---~~~~~~l~~~~~~pdfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~~~vP~ 362 (612)
+||+++||++.. ++. ...++++.++ .++|+++..||.+... +.. ....+.+..+ .+-
T Consensus 5 m~ilf~GDv~G~------------~G~~~l~~~l~~lr~~-~~~d~vi~Ngen~~gG~g~~---~~~~~~ln~~--G~D- 65 (281)
T 1t71_A 5 IKFIFLGDVYGK------------AGRNIIKNNLAQLKSK-YQADLVIVNAENTTHGKGLS---LKHYEFLKEA--GVN- 65 (281)
T ss_dssp CEEEEECEEBHH------------HHHHHHHTTHHHHHHH-HTCSEEEEECTBTTTTSSCC---HHHHHHHHHH--TCC-
T ss_pred EEEEEECCcCCh------------HHHHHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCCcC---HHHHHHHHhc--CCC-
Confidence 899999999622 111 1233444332 2589999999998533 332 2222222221 233
Q ss_pred EEccCCCccCCC-CCCCCCCCCCCCCccccccccccccCCCC----CCceEEEEEeCCEE--EEEEcCCCCCCC--CHHH
Q 007227 363 MIASGNHERDWP-GTGSFYGNMDSGGECGVLVENMFYVPTEN----RAKFWYSTDYGMFR--FCIADTEQDWRE--GTEQ 433 (612)
Q Consensus 363 ~~~~GNHD~~~~-~~~~~y~~~dsgge~g~~~~~~f~~P~~~----~~~~yYsfd~G~v~--Fi~LDT~~~~~~--g~~Q 433 (612)
..++||||+++. ..-.|.+ .. . +.. .-++|... .++.|.-++.++++ +|.+-+...+.+ -..-
T Consensus 66 a~TlGNHefD~g~~~~~~l~---~~-~---~v~-~aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~p 137 (281)
T 1t71_A 66 YITMGNHTWFQKLDLAVVIN---KK-D---LVR-PLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNP 137 (281)
T ss_dssp EEECCTTTTCCGGGHHHHTT---CT-T---EEC-BSCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCCH
T ss_pred EEEEccCcccCCccHHHHhh---hc-C---EEe-eccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccCH
Confidence 357799999864 1001111 00 0 000 00112111 23456778888744 555544431221 1222
Q ss_pred HHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 434 YRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 434 ~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
.+-+++.++ +.+...+||..|.-. . .+ .+.+.. ....+||+++.||.|...
T Consensus 138 f~~a~~~v~---~~~~diIIv~~H~g~--t-----------~E---k~~la~-~~dg~VD~VvGgHTHv~t 188 (281)
T 1t71_A 138 FKVLKELIL---KRDCDLHIVDFHAET--T-----------SE---KNAFCM-AFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp HHHHHHHHT---TCCCSEEEEEEECSC--H-----------HH---HHHHHH-HHTTTSSEEEEESSSSCC
T ss_pred HHHHHHHHh---hcCCCEEEEEeCCCc--h-----------HH---HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 444555555 356789999999421 0 01 122322 223569999999999854
No 40
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=97.32 E-value=0.0035 Score=69.74 Aligned_cols=85 Identities=18% Similarity=0.127 Sum_probs=42.1
Q ss_pred CceEEEEEecCCCCCCCCCC--cccccccChHHHHHHHHHh---cCCCC-EEEEcCccccCCCccc----HHHHHHHhhh
Q 007227 285 SLQQVIIFGDMGKDEADGSN--EYNNFQRGSLNTTRQLIQD---LKNID-IVFHIGDICYANGYIS----QWDQFTAQIE 354 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~--~~~~~~~~s~~~~~~l~~~---~~~pd-fvl~~GDi~Y~~g~~~----~wd~f~~~i~ 354 (612)
..++|+.++|+|..-..... .|.. ..+.+..+...+++ ..+++ +++.+||++....... ..+...+.+.
T Consensus 14 ~~l~ILhtnD~Hg~~~~~~~~~~~~~-~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~ln 92 (557)
T 3c9f_A 14 NDINFVHTTDTHGWYSGHINQPLYHA-NWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIFI 92 (557)
T ss_dssp CSEEEEEECCCTTCTTCCSSCGGGCC-CHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHHT
T ss_pred eEEEEEEEcccccCccCccccccccc-ccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHHH
Confidence 45999999999975321110 1100 01112333333332 25677 5789999994321110 1111122222
Q ss_pred ccccCCCeEEccCCCccCC
Q 007227 355 PIASTVPYMIASGNHERDW 373 (612)
Q Consensus 355 ~l~~~vP~~~~~GNHD~~~ 373 (612)
.+ ..- ++++||||+++
T Consensus 93 ~l--g~D-a~tlGNHEfD~ 108 (557)
T 3c9f_A 93 KQ--DYD-LLTIGNHELYL 108 (557)
T ss_dssp TS--CCS-EECCCGGGSSS
T ss_pred hc--CCC-EEeecchhccc
Confidence 21 223 56889999974
No 41
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.11 E-value=0.0039 Score=53.12 Aligned_cols=99 Identities=16% Similarity=0.115 Sum_probs=60.1
Q ss_pred CCCCcceeeecC-CCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 167 NAPVYPRLAQGK-VWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 167 ~~P~~~~La~~~-~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
.+|..+.+.... +.++++|+|........ ..-.|+|...+..... .-..... .+....+
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~-----------------~~~~~~~ 71 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPID-DWIMETI-----------------SGDRLTH 71 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTT-TSEEEEE-----------------ETTCCEE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCcc-ceEEEEE-----------------CCCceEE
Confidence 456666664433 57899999987642110 1235666543221100 0000011 1123457
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~ 283 (612)
+|++|+|++.|.+||......|...||....|+|.+.+..
T Consensus 72 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 72 QIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp EECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 8999999999999998875556667899999999876544
No 42
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.11 E-value=0.003 Score=52.94 Aligned_cols=93 Identities=14% Similarity=0.090 Sum_probs=56.8
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCC-CccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGD-RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
|.+|..+.+. ..+.++++|.|....+..-..-.|+|...... .+.... .......+
T Consensus 8 P~~P~~~~~~-~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------------------~~~~~~~~ 64 (106)
T 2dju_A 8 PKPPIDLVVT-ETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD----------------------GVATTRYS 64 (106)
T ss_dssp CCCCEEEEEE-EEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC----------------------CCCSSEEE
T ss_pred CcCCCCcEEE-eccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc----------------------CCCccEEE
Confidence 4556555552 23568999999976321112345667654322 111100 00112357
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
|++|+|++.|.+||......|...||+...++|.+..
T Consensus 65 i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~ 101 (106)
T 2dju_A 65 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQS 101 (106)
T ss_dssp EESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSS
T ss_pred EeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCC
Confidence 8999999999999997755566668888889987643
No 43
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.07 E-value=0.0018 Score=55.03 Aligned_cols=96 Identities=16% Similarity=0.182 Sum_probs=58.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++ ...+.++++|.|........ ..-.|+|...+.... ...... +-...+
T Consensus 11 P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~----~~~~~~-----------------~~~~~~ 68 (111)
T 1x5l_A 11 PSQVVVIRQ-ERAGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQ----SYSTLK-----------------AVTTRA 68 (111)
T ss_dssp CCCCCCEEC-SCBCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCS----SCEEEE-----------------ESSSEE
T ss_pred CCCCceEEE-EEcCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCce----eEEEec-----------------CCCCEE
Confidence 445554444 23457899999976532110 123566655432110 000111 112356
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~ 283 (612)
+|++|+|++.|.+||......|...||....|+|++.++.
T Consensus 69 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 69 TVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 7899999999999998765555567899999999887654
No 44
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=97.07 E-value=0.0062 Score=52.22 Aligned_cols=42 Identities=17% Similarity=0.116 Sum_probs=34.8
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
..++|++|+|+|.|.+||..-...|...+|+...|+|.+.+.
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 357899999999999999877556666789999999987654
No 45
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=96.99 E-value=0.0075 Score=62.89 Aligned_cols=49 Identities=24% Similarity=0.177 Sum_probs=27.8
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHhCCCeEEEecccccce
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQKYKVDIAVFGHVHNYE 504 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k~~VdlvlsGH~H~Ye 504 (612)
.....+|++.|..+ ..+.. . ...+.. ...|..-+ -+||++|.||.|...
T Consensus 206 ~g~D~II~l~H~G~--~~d~~-~---~~~e~~-~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGI--EKQAQ-S---SGAENA-VFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCC--CSSCC-C---TTCSSC-HHHHHHHC--SCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCc--ccccc-c---cccchh-HHHHHhcC--CCCcEEEECCCCccC
Confidence 45788999999775 11110 0 001111 11222212 489999999999853
No 46
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.97 E-value=0.0023 Score=54.35 Aligned_cols=94 Identities=16% Similarity=0.213 Sum_probs=58.0
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC---CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+ ...+.++++|.|........ ..-.|+|...+...... ..+. +...
T Consensus 7 ~P~~P~~p~~-~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~----~~~~-----------------~~~~ 64 (109)
T 1x5x_A 7 GPSMPASPVL-TKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFK----PKYD-----------------GEDL 64 (109)
T ss_dssp CCCCCCCCEE-EEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCE----EEEE-----------------ESCS
T ss_pred CCcCCCCCEE-EEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceE----EeEe-----------------CCcc
Confidence 3556777775 34467899999986643111 12356666543211100 0111 0122
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..++++|+|++.|.+||......|...+|....++|.+.
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCC
Confidence 467899999999999999875556566788888998764
No 47
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=96.97 E-value=0.00079 Score=65.52 Aligned_cols=64 Identities=17% Similarity=0.294 Sum_probs=43.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
.|++++||+|.. ...+.++++.. .++|.|+++||++. .|... .+.++.+. ..+++
T Consensus 13 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~-~g~~~--~~~~~~l~----~~~~~ 70 (221)
T 1g5b_A 13 RNIWVVGDLHGC---------------YTNLMNKLDTIGFDNKKDLLISVGDLVD-RGAEN--VECLELIT----FPWFR 70 (221)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTCEEEECSCCSS-SSSCH--HHHHGGGG----STTEE
T ss_pred ceEEEEEcCCCC---------------HHHHHHHHHHccCCCCCCEEEEeCCccC-CCCCh--HHHHHHHh----cCCEE
Confidence 689999999842 23455555543 36899999999994 44322 12333332 35899
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 71 ~v~GNhd~~ 79 (221)
T 1g5b_A 71 AVRGNHEQM 79 (221)
T ss_dssp ECCCHHHHH
T ss_pred EEccCcHHH
Confidence 999999964
No 48
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=96.96 E-value=0.015 Score=64.24 Aligned_cols=76 Identities=16% Similarity=0.111 Sum_probs=43.1
Q ss_pred ceEEEEEeCCE--EEEEEcCCCC-----------CCCCHHHHHHHHHHHhhccCCCCCeEEEEEccccccCCCCCccCCC
Q 007227 406 KFWYSTDYGMF--RFCIADTEQD-----------WREGTEQYRFIEHCLASVDRQKQPWLIFLAHRVLGYSSDLSYAVEG 472 (612)
Q Consensus 406 ~~yYsfd~G~v--~Fi~LDT~~~-----------~~~g~~Q~~WL~~~L~~~~r~~~~w~Iv~~H~P~~yss~~~~~~~~ 472 (612)
..|.-++.+++ -||.+-+... +...-+..+...+.|++ .+...+|++.|..+ .
T Consensus 134 ~py~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~--~--------- 199 (530)
T 4h1s_A 134 LPYKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGF--E--------- 199 (530)
T ss_dssp BSEEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH--H---------
T ss_pred cceEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCc--h---------
Confidence 34667888885 4566655421 11112223333344543 45678999999653 0
Q ss_pred CccchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007227 473 SFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 473 ~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
.+ ..+.++ -+||++|.||.|.+-
T Consensus 200 -------~d--~~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 200 -------MD--KLIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp -------HH--HHHHHHSTTCCEEECCSSCCCB
T ss_pred -------HH--HHHHhcCCCCCeeccCCcccee
Confidence 11 113333 379999999999853
No 49
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.94 E-value=0.0031 Score=53.80 Aligned_cols=93 Identities=16% Similarity=0.169 Sum_probs=56.0
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++ ...+.+++.|+|.......-..-.|+|...+...... ... +-....+|
T Consensus 18 P~~P~~l~~-~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~------------------~~~~~~~i 74 (115)
T 1x5z_A 18 PGQPLNFKA-EPESETSILLSWTPPRSDTIANYELVYKDGEHGEEQR----ITI------------------EPGTSYRL 74 (115)
T ss_dssp CCCCEEEEE-ECSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCBC----CEE------------------CSSSEEEE
T ss_pred CCCCccCEe-eeCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCceE----Eec------------------CCCcEEEE
Confidence 344555554 3345789999998764311112344554332211100 000 01135678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
+||+|++.|.+||......|...||....|+|.+.+
T Consensus 75 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 75 QGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp ECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred CCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 999999999999987755566678888999998653
No 50
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=96.93 E-value=0.031 Score=52.76 Aligned_cols=133 Identities=11% Similarity=0.096 Sum_probs=72.6
Q ss_pred ccceEEEEEEeeccc--ceEEEEEec---CCCCcEEEEeccceec------cCCCCCCcceeeecCCCCcEEEEEEeCCC
Q 007227 124 TGKGSLKLQLINQRS--DFSFVLFTN---GLLNPKVVAVSNKVTF------TNPNAPVYPRLAQGKVWNEMTVTWTSGYG 192 (612)
Q Consensus 124 ~g~~~~~~~l~n~r~--~~~f~~~~~---~~~~p~~~a~s~~~~~------~~~~~P~~~~La~~~~~~~m~V~W~T~~~ 192 (612)
.+.....+.+-+.+. .|.|++... |...+ -..+..+.. ..+.+|..+.+ ...+.++++|+|.....
T Consensus 65 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~--s~~s~~~~~~~~~~~~~~~~P~~~~~-~~~~~~sv~l~W~~p~~ 141 (214)
T 2ibg_A 65 ELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKE--SNTSAKFYLQPGAALDPMPVPELLEI-EEYSETAVVLHWSLASD 141 (214)
T ss_dssp SSEEEEEEEECSCCTTCEEEEEEEEEETTSCEEE--CCCCCCEECCCSTTSCCCCCCEECCC-BCCSSSCEEEEEECCTT
T ss_pred ccCcceeEEecCCcCCCEEEEEEEEEecCCCCCC--CCCcccEEeccCcCCCCCCCCcccEE-EEccCCeEEEEEeCCCc
Confidence 345566777777775 577777654 22210 000111111 12223444333 23357899999987631
Q ss_pred ---CCCCccEEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCcc
Q 007227 193 ---INEAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYI 268 (612)
Q Consensus 193 ---~~~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~ 268 (612)
..-..-.|+|...+. ..+. ..... ..-....+|+||+|++.|.|||......|...
T Consensus 142 ~~~~~i~~Y~v~~~~~~~~~~~~----~~~~~----------------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~ 201 (214)
T 2ibg_A 142 ADEHLITGYYAYYRPSSSAGEYF----KATIE----------------GAHARSFKIAPLETATMYEFKLQSFSAASASE 201 (214)
T ss_dssp CCGGGCCEEEEEEEETTCCSCCE----EEEEE----------------CTTCCEEEECSCCTTCEEEEEEEEECSSCBCC
T ss_pred cCCCCcceEEEEEEECCCCcceE----Eeecc----------------CCcceEEEeCCCCCCCEEEEEEEEEcCCccCC
Confidence 001123566665433 1111 01111 11122457899999999999999876566667
Q ss_pred ccceEEEEcCC
Q 007227 269 WSSEYQFKASP 279 (612)
Q Consensus 269 ~S~~~~F~T~p 279 (612)
+|....++|..
T Consensus 202 ~S~~~~~~T~~ 212 (214)
T 2ibg_A 202 FSALKQGRTQR 212 (214)
T ss_dssp CCCCEEEECCC
T ss_pred CcceEeeEecC
Confidence 88889999864
No 51
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.91 E-value=0.0033 Score=55.27 Aligned_cols=93 Identities=14% Similarity=0.085 Sum_probs=57.4
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC------CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE------AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
|.+|..+++ ...+.+++.|+|........ ..-.|+|...+..... ..... ..
T Consensus 19 p~~P~~l~~-~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~----~~~~~-----------------~~ 76 (123)
T 2edd_A 19 MLPPVGVQA-VALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAK----YKSED-----------------TT 76 (123)
T ss_dssp SCCCEEEEE-EEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCC----CCCEE-----------------ES
T ss_pred CCCCcceEE-EEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCcc----EEEEe-----------------CC
Confidence 445655555 33457999999986532110 0235677654321100 00000 01
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.++|......|...||....|+|.+.
T Consensus 77 ~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 77 SLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred ceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 23578999999999999998764456667999999999876
No 52
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.89 E-value=0.0023 Score=54.50 Aligned_cols=95 Identities=19% Similarity=0.214 Sum_probs=58.4
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+....+.++++|.|....... -..-.|+|...+...+... +. +...
T Consensus 8 ~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~~-----~~-----------------~~~~ 65 (110)
T 2crz_A 8 PPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPREV-----YQ-----------------GSEV 65 (110)
T ss_dssp CCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEEE-----EE-----------------ESCS
T ss_pred CCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEEE-----Ee-----------------CCcE
Confidence 356677776633345689999996542100 1123566654332222110 11 1123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
..++++|+|++.|.+||......|...||+...++|.+.+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 66 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 4578999999999999998755566678888899987654
No 53
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=96.84 E-value=0.031 Score=51.62 Aligned_cols=120 Identities=18% Similarity=0.109 Sum_probs=62.9
Q ss_pred EEEEeeccc--ceEEEEEec---CCCCcEEEEeccceeccCCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEcc
Q 007227 130 KLQLINQRS--DFSFVLFTN---GLLNPKVVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGP 204 (612)
Q Consensus 130 ~~~l~n~r~--~~~f~~~~~---~~~~p~~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~ 204 (612)
++.|-+.+. .|.|.+... +.+.|..+.. ...|.+|..+.+ ...+.++++|.|.-..+ .-..-.|+|..
T Consensus 59 ~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~-----~t~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~ 131 (186)
T 1qr4_A 59 SFILRGLDAGTEYTISLVAEKGRHKSKPTTIKG-----STVVGSPKGISF-SDITENSATVSWTPPRS-RVDSYRVSYVP 131 (186)
T ss_dssp EEEEESCCSSCEEEEEEEEESSSCBCCCEEEEE-----ECCCCCCSCEEE-ESCCSSCEEEEECCCSS-CCSEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCEEEEE-----ECCCCCCCccEE-EEeCCCEEEEEEECCCC-cccEEEEEEEe
Confidence 344445543 466666553 2223322211 124667776655 23457999999986532 12234566765
Q ss_pred CCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCcccc--ceEEEEcCCC
Q 007227 205 KGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWS--SEYQFKASPY 280 (612)
Q Consensus 205 ~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S--~~~~F~T~p~ 280 (612)
.++... ...... +-....+|+||+||+.|.++|...... +.| ....|+|.|.
T Consensus 132 ~~~~~~----~~~~~~-----------------~~~~~~~i~~L~p~t~Y~~~V~A~~~~---g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 132 ITGGTP----NVVTVD-----------------GSKTRTKLVKLVPGVDYNVNIISVKGF---EESEPISGILKTALD 185 (186)
T ss_dssp TTCCCC----EEEEEE-----------------TTCCEEEECSCCSSCEEEEEEEEEETT---EECCCEEEEEEC---
T ss_pred CCCCCc----eEEEcC-----------------CCcCEEEEcCCCCCCEEEEEEEEEcCC---CcCcCEEEEEEecCC
Confidence 432111 011111 122456789999999999999875322 223 3456777764
No 54
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.81 E-value=0.004 Score=52.66 Aligned_cols=94 Identities=13% Similarity=0.151 Sum_probs=57.4
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCC---ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++ ...+.+++.|.|...... .+ .-.|+|...+..... ..... +-..
T Consensus 7 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~~-~g~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~ 63 (108)
T 2djs_A 7 GPSTVPIMHQ-VSATMRSITLSWPQPEQP-NGIILDYEIRYYEKEHNEFN----SSMAR-----------------SQTN 63 (108)
T ss_dssp CCCCCSCCEE-EEECSSEEEEECCCCSCC-SSCEEEEEEEEEETTSCSTT----CEEEE-----------------ESSS
T ss_pred CCCCCcceEE-EecCCCEEEEEECCCCCC-CCeEEEEEEEEEECCCCCcc----eeEEe-----------------cCcc
Confidence 3455665555 233578999999876321 11 123455443321110 00000 1124
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
.++|+||+|++.|.+||......|...||....|+|++..
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 64 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 5678999999999999987755666678899999998754
No 55
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.78 E-value=0.0016 Score=54.54 Aligned_cols=37 Identities=24% Similarity=0.215 Sum_probs=30.7
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
.+|+||+|++.|.+||......|...||+...|+|.|
T Consensus 66 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 66 FTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred EEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 4789999999999999877555666788888888876
No 56
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.78 E-value=0.0048 Score=52.30 Aligned_cols=92 Identities=17% Similarity=0.225 Sum_probs=56.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++. ..+.+++.|.|....... -..-.|+|...+... ...+. +.....
T Consensus 8 P~~P~~~~~~-~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~~~------~~~~~-----------------~~~~~~ 63 (106)
T 1x4x_A 8 PDQCKPPQVT-CRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEGSM------QICYC-----------------GPGLSY 63 (106)
T ss_dssp CCCCCCCCCE-EEETTEEEEECCCCSCSSSCCCEEEEEEESSTTSC------CEEEE-----------------ESCSEE
T ss_pred cCCCCCCEEE-EcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCCce------EEEEe-----------------CCcceE
Confidence 4556666653 235789999998764210 011345555432111 01111 011246
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
+|+||+|++.|.+||......|...||+...++|.+.+
T Consensus 64 ~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 64 EIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 78999999999999998755566678999999998653
No 57
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.75 E-value=0.0074 Score=51.87 Aligned_cols=94 Identities=15% Similarity=0.112 Sum_probs=56.7
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCC-CCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGY-GIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~-~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+++. ..+.++++|.|.... ... -..-.|+|...+...+. .... ..+-...
T Consensus 18 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~~~ 76 (120)
T 1x5f_A 18 PSAPRDVVAS-LVSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARER------VENT--------------SHPGEMQ 76 (120)
T ss_dssp CCCCEEEEEE-EECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCE------EEEC--------------SSTTCSE
T ss_pred CCCCCCcEEE-ecCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCce------EEEe--------------ccCCccE
Confidence 4455555442 335789999998764 211 11235666654322111 0000 0112345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
++|++|+|++.|.+||......|...||+...|+|.+.
T Consensus 77 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 77 VTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 68899999999999998775556556888899999754
No 58
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.75 E-value=0.0059 Score=52.09 Aligned_cols=41 Identities=24% Similarity=0.376 Sum_probs=35.0
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~ 283 (612)
++|+||+|+|.|.+||......|...||+...|+|.+.++.
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 78999999999999999875556667899999999887654
No 59
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.72 E-value=0.0027 Score=54.94 Aligned_cols=93 Identities=13% Similarity=0.101 Sum_probs=57.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC------CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE------AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
|.+|..+++ ...+.+++.|+|.-...... ..-.|+|....... ....+. .+-
T Consensus 9 p~~P~~l~~-~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~-----~~~~~~----------------~~~ 66 (113)
T 1x5j_A 9 MMPPVGVQA-SILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN-----TKYKNA----------------NAT 66 (113)
T ss_dssp CCCCEEEEE-EEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSS-----CCCEEC----------------CBC
T ss_pred CCCCcceEE-EEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCC-----eEEEEE----------------ecC
Confidence 345666655 33457999999986532110 02356676521100 001110 112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.++|......|...||....++|.+.
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 34678999999999999998775556667899999999765
No 60
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=96.67 E-value=0.0017 Score=65.87 Aligned_cols=66 Identities=18% Similarity=0.277 Sum_probs=43.4
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
++++++||+|.. ...+.++++.. .++|.++++||++ +.|..+ .+.++.+..+. .+++
T Consensus 1 M~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~d~~v~lGD~v-drG~~s--~~~l~~l~~l~--~~~~ 60 (280)
T 2dfj_A 1 MATYLIGDVHGC---------------YDELIALLHKVEFTPGKDTLWLTGDLV-ARGPGS--LDVLRYVKSLG--DSVR 60 (280)
T ss_dssp -CEEEECCCCSC---------------HHHHHHHHHHTTCCTTTCEEEECSCCS-SSSSCH--HHHHHHHHHTG--GGEE
T ss_pred CeEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCcC-CCCCcc--HHHHHHHHhCC--CceE
Confidence 368999999843 34466666653 3579999999999 445432 12333333321 2799
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 61 ~v~GNHe~~ 69 (280)
T 2dfj_A 61 LVLGNHDLH 69 (280)
T ss_dssp ECCCHHHHH
T ss_pred EEECCCcHH
Confidence 999999964
No 61
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.67 E-value=0.0075 Score=51.23 Aligned_cols=96 Identities=18% Similarity=0.152 Sum_probs=58.1
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++ ...+.+++.|.|.-..... -..-.|+|...++..... ...... .. ..+
T Consensus 8 P~~p~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~---~~~~~~---------------~~--~~~ 66 (109)
T 2e7h_A 8 PPAVSDIRV-TRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSS---VRFLKT---------------SE--NRA 66 (109)
T ss_dssp SCCCCCCEE-EEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTT---SEEEEE---------------SS--SEE
T ss_pred CCCCCccEE-EecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCce---eEEEcc---------------CC--CEE
Confidence 445555555 2335789999998663211 012356665543111000 001110 11 266
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
+|+||+|++.|.+||......|...||+...|+|.+.+.
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~ 105 (109)
T 2e7h_A 67 ELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDSG 105 (109)
T ss_dssp EEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCSS
T ss_pred EECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCCC
Confidence 899999999999999987555666789999999987643
No 62
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.65 E-value=0.0025 Score=54.67 Aligned_cols=94 Identities=17% Similarity=0.141 Sum_probs=56.9
Q ss_pred CCCCcceeeec---CCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 167 NAPVYPRLAQG---KVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 167 ~~P~~~~La~~---~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
..|..|.+... .+.++++|.|....... -..-.|+|.......+. ..+. +...
T Consensus 8 ~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~-----~~~~-----------------~~~~ 65 (110)
T 2db8_A 8 PVPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFR-----EVYV-----------------GKET 65 (110)
T ss_dssp CCCCCCBCCCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCE-----EEEE-----------------ESCS
T ss_pred CCCCCccccceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceE-----EEEe-----------------CCcC
Confidence 34555544332 25799999998764311 01235666553321111 0011 0112
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
..+++||+|++.|.+||......|...||+...|+|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 35689999999999999877555666788889999987653
No 63
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=96.61 E-value=0.031 Score=58.16 Aligned_cols=47 Identities=28% Similarity=0.302 Sum_probs=27.3
Q ss_pred CCCCeEEEEEccccccCCCCCccCCCCccchhhHHHHHHHHHh-CCCeEEEecccccce
Q 007227 447 QKQPWLIFLAHRVLGYSSDLSYAVEGSFAEPMGRESLQKLWQK-YKVDIAVFGHVHNYE 504 (612)
Q Consensus 447 ~~~~w~Iv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~ll~k-~~VdlvlsGH~H~Ye 504 (612)
.+...+|++.|..+ ..... ....+.. .. ++.+ -+||++|.||.|...
T Consensus 200 ~g~D~II~l~H~G~--~~d~~----~~~~en~-~~----~~~~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 200 KGADVVVVVAHSGL--SADPY----QAMAENS-VY----YLSQVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp TTCSEEEEEECCCC--CCSCC----CTTCSCC-HH----HHTTSTTCCEEEECSSCSEE
T ss_pred cCCCEEEEEeccCc--ccccc----ccccchh-HH----HHhhCCCCCEEEeCCCcccc
Confidence 45788999999764 21110 0011111 11 1223 489999999999854
No 64
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.60 E-value=0.0028 Score=54.86 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=56.3
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
-|.+|..+.+....+.++++|.|....... -..-.|+|..... ..+... +. +-.
T Consensus 17 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~-----~~-----------------~~~ 74 (120)
T 2crm_A 17 KPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMI-----YS-----------------GAT 74 (120)
T ss_dssp CCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEE-----EC-----------------SSC
T ss_pred CCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEE-----Ee-----------------ccc
Confidence 345666666642345789999998653210 1123455554332 111110 00 112
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
...++++|+|++.|.|||......|...||+...++|.+.+
T Consensus 75 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 115 (120)
T 2crm_A 75 REHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVS 115 (120)
T ss_dssp SEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCS
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCC
Confidence 24578999999999999997754555567877778876543
No 65
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=96.51 E-value=0.004 Score=52.68 Aligned_cols=39 Identities=23% Similarity=0.208 Sum_probs=32.2
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
..++|+||+|++.|.+||......|...+|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 356789999999999999876555556688899999987
No 66
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=96.50 E-value=0.039 Score=52.26 Aligned_cols=93 Identities=14% Similarity=0.157 Sum_probs=57.0
Q ss_pred CCCCCCcceeeecC---CCCcEEEEEEeCCCCCC------CccEEEEccCCCCCccccCcceEEeccccCCCCCcccccc
Q 007227 165 NPNAPVYPRLAQGK---VWNEMTVTWTSGYGINE------AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWR 235 (612)
Q Consensus 165 ~~~~P~~~~La~~~---~~~~m~V~W~T~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~ 235 (612)
-|.+|..+.+.... ..+++.|+|........ -.-.|+|...++..+.. ...
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~-----~~~--------------- 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEI-----HFA--------------- 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEE-----EEE---------------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEE-----Eec---------------
Confidence 45677666665432 36899999987643110 12345565543322211 000
Q ss_pred CCCeEEEEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcCC
Q 007227 236 DPGYIHTGFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKASP 279 (612)
Q Consensus 236 ~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~-~~~S~~~~F~T~p 279 (612)
+-.....|.+|+|++.|..||......|. ..||+...|+|+.
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 11235678999999999999987644454 5688899999954
No 67
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.49 E-value=0.012 Score=50.63 Aligned_cols=95 Identities=15% Similarity=0.087 Sum_probs=56.2
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+++ ...+.++++|+|.......-..-.|+|...+..... ...... .+....++|+|
T Consensus 21 ~P~~l~~-~~~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~~--~~~~~~-----------------~~~~~~~~i~~ 80 (119)
T 2ee2_A 21 APTEVGV-KVLSSSEISVHWEHVLEKIVESYQIRYWAAHDKEEA--ANRVQV-----------------TSQEYSARLEN 80 (119)
T ss_dssp CCCSCEE-EEEETTEEEEECCCCSCTTCCEEEEEEEESSSCGGG--CEEEEE-----------------ETTCSEEEECS
T ss_pred CCCcEEE-EEccCCEEEEEecCCCCCccceEEEEEEECCCcccC--cEEEEc-----------------CCCEeEEEECC
Confidence 3444444 233578999999876320011235666543321100 000111 11224568999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
|+|++.|.+||......|...+|+...|+|.+.+.
T Consensus 81 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 81 LLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp CCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred CCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 99999999999877555666788889999976543
No 68
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.48 E-value=0.0098 Score=50.76 Aligned_cols=91 Identities=15% Similarity=0.128 Sum_probs=56.2
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++. ..+.++++|.|....... -..-.|+|...+...+. ... ......
T Consensus 18 P~~P~~l~~~-~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~------~~~-----------------~~~~~~ 73 (116)
T 1x5g_A 18 PGPAPNLRAY-AASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQ------DVD-----------------VSSHSY 73 (116)
T ss_dssp CCCCSSCEEE-EEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCC------CEE-----------------ECSSEE
T ss_pred CcCCCccEEE-ecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccE------EEe-----------------cCCceE
Confidence 4456656552 235789999998753211 11235666554332210 000 012356
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+|+||+|++.|.+||......|...||+...|+|.+.
T Consensus 74 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 74 TINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 7899999999999998775556666888888998764
No 69
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=96.45 E-value=0.015 Score=48.99 Aligned_cols=91 Identities=19% Similarity=0.237 Sum_probs=56.1
Q ss_pred CCCCCcceeeec-CCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 166 PNAPVYPRLAQG-KVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~P~~~~La~~-~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+... .+.++++|+|.-...... ..-.|+|...+...+... .. . ...
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~------~~---------------~--~~~ 64 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQ------RA---------------A--SNF 64 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEE------EE---------------S--SSE
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEe------cC---------------C--ccE
Confidence 456666655433 367899999987642110 013455554433211110 00 0 125
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
++|++|+|++.|.+||......|...||+...|+|.+
T Consensus 65 ~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 65 TEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 6899999999999999877555666789999999854
No 70
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=96.41 E-value=0.0029 Score=63.42 Aligned_cols=64 Identities=23% Similarity=0.323 Sum_probs=41.7
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CC-CCEEEEcCccccCCCcccHHHHHHHhhhccccCCCeE
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KN-IDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~-pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~~~vP~~ 363 (612)
.|++++||+|.. ...++++++.. .. .|.++++||++. .|... .+.++.+.. .+++
T Consensus 19 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd-~g~~~--~~~l~~l~~----~~~~ 76 (262)
T 2qjc_A 19 GRVIIVGDIHGC---------------RAQLEDLLRAVSFKQGSDTLVAVGDLVN-KGPDS--FGVVRLLKR----LGAY 76 (262)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTSEEEECSCCSS-SSSCH--HHHHHHHHH----HTCE
T ss_pred CeEEEEeCCCCC---------------HHHHHHHHHHHhccCCCCEEEEecCCCC-CCCCH--HHHHHHHHH----CCCE
Confidence 389999999832 23455555543 23 499999999994 44322 123333332 3799
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 77 ~v~GNHd~~ 85 (262)
T 2qjc_A 77 SVLGNHDAK 85 (262)
T ss_dssp ECCCHHHHH
T ss_pred EEeCcChHH
Confidence 999999974
No 71
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=96.40 E-value=0.0068 Score=52.84 Aligned_cols=83 Identities=16% Similarity=0.108 Sum_probs=48.7
Q ss_pred CCCCcEEEEEEeCCCCC-C-CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEE
Q 007227 178 KVWNEMTVTWTSGYGIN-E-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYT 255 (612)
Q Consensus 178 ~~~~~m~V~W~T~~~~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~ 255 (612)
.+.++++|+|..+.+.. + ..-.|+|..++...+... ... ++....++|+||+|++.|.
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~---~~~-----------------~~~~~~~~l~~L~p~t~Y~ 78 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE---KKV-----------------QGNKDHIILEHLQWTMGYE 78 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEE---EEE-----------------ETTTCCEEECCCCTTCCEE
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEe---EEc-----------------CCCcCEEEEcCCCCCCEEE
Confidence 46899999998653211 1 123778877543322110 000 1112346799999999999
Q ss_pred EEEeeecCCCCccccceEEEEcCCCC
Q 007227 256 YKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 256 Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
+||......|...-| ...|+|.+.+
T Consensus 79 frV~A~N~~G~s~pS-~~~~~T~~~~ 103 (114)
T 2kbg_A 79 VQITAANRLGYSEPT-VYEFSMPPKP 103 (114)
T ss_dssp EEEEEECTTSCEEEE-EEEECCCCCC
T ss_pred EEEEEEeCCcCcCCc-CCEEEcCCCC
Confidence 999876433432222 4678886654
No 72
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=96.40 E-value=0.023 Score=53.77 Aligned_cols=94 Identities=16% Similarity=0.121 Sum_probs=54.9
Q ss_pred CCCcceeeecC-CCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 168 APVYPRLAQGK-VWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 168 ~P~~~~La~~~-~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
+|..+.+.... +.++++|+|....... -..-.|+|...+...... -..... ++-....+
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~ 169 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD-WVIEPV-----------------VGNRLTHQ 169 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGG-SEEEEE-----------------ESSCSEEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCc-eEEEEe-----------------cCCeeEEE
Confidence 55555654433 3689999998753211 112255665443321100 000011 11234567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
|+||+|++.|.+||......|...+|+...|++..
T Consensus 170 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 170 IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp ECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 89999999999999877555666788888888754
No 73
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.40 E-value=0.018 Score=49.41 Aligned_cols=96 Identities=18% Similarity=0.042 Sum_probs=57.4
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCC--CC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYG--IN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~--~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
+|..+++ ...+.++++|+|..... .. -..-.|+|...+....... ... .....+-...+
T Consensus 18 ~P~~~~~-~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-~~~---------------~~~~~~~~~~~ 80 (122)
T 1va9_A 18 PPMDVTL-QPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY-SIV---------------EMKATGDSEVY 80 (122)
T ss_dssp CCEEEEE-EECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC-BCC---------------BCCCCSSEEEE
T ss_pred CCcceEE-EeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce-EEE---------------EEecCCceeEE
Confidence 4444554 23457899999987642 00 1123566655432211000 000 00112345778
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+|+||+|++.|.+||......|...||....|+|.+.
T Consensus 81 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 81 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 8999999999999998765455556888888988754
No 74
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.36 E-value=0.012 Score=50.43 Aligned_cols=95 Identities=17% Similarity=0.093 Sum_probs=57.7
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+.+. ..+.++++|.|.-...... ..-.|+|...+..... .... ...-...
T Consensus 17 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~~~ 75 (119)
T 2ed7_A 17 LPSAPRDVVPV-LVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDNRER------ALNT--------------TQPGSLQ 75 (119)
T ss_dssp SCCCCSCCEEE-EECSSCEEEECCCCSCCSSCEEEEEEEEEESSCCCCE------EEEC--------------CCTTCCE
T ss_pred CCcCCcceEEE-ecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCCcce------eeEe--------------ecCCceE
Confidence 45667766653 2357899999986532110 0124455543322111 0000 0112345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
.+|++|+|++.|.+||......|...||+...++|.+.
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 76 LTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp EEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred EEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 68899999999999998775556667888899998764
No 75
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.35 E-value=0.0054 Score=54.02 Aligned_cols=102 Identities=17% Similarity=0.205 Sum_probs=56.7
Q ss_pred cCCCCCC-cceeeecCCCCcEEEEEEeCCCCCCCcc-EEEEccCCCCCccccCcceEEeccccCCCCCccccccC--CCe
Q 007227 164 TNPNAPV-YPRLAQGKVWNEMTVTWTSGYGINEAEP-FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD--PGY 239 (612)
Q Consensus 164 ~~~~~P~-~~~La~~~~~~~m~V~W~T~~~~~~~~~-~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~--~g~ 239 (612)
.-|.+|. .+++ ...+.++++|.|...... .... .|+|.......... + ++. ....|.. ...
T Consensus 14 ~~P~~P~~~~~~-~~~~~~sv~L~W~~p~~~-g~~~Y~~~Y~~~~~~~~~~--~--------~~~---~~~~w~~~~~~~ 78 (127)
T 2dmk_A 14 TAPNPPSIREEL-CTASHDTITVHWISDDEF-SISSYELQYTIFTGQANFI--S--------LYN---SVDSWMIVPNIK 78 (127)
T ss_dssp SSCCCCEEEEEE-EEEETTEEEEEEECSCCS-SEEEEEEEEEEESCCSCHH--H--------HHH---TGGGSEEEEEEC
T ss_pred CCCcCCCCCCEE-EeeeCCEEEEEECCCCCC-CccceEEEEEEeccccccc--c--------ccc---CCCCcEEeeccc
Confidence 3466776 5555 333578999999987531 1123 67776411100000 0 000 0001110 000
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
-...+++||+|++.|.|||......|. .+|....++|++.+
T Consensus 79 ~~~~~v~gL~p~t~Y~frV~A~N~~G~-~~S~~v~~~T~~~~ 119 (127)
T 2dmk_A 79 QNHYTVHGLQSGTRYIFIVKAINQAGS-RNSEPTRLKTNSQP 119 (127)
T ss_dssp SSEEEEESCCSSCEEEEEEEEEESSCE-EECCCEEEECCSSC
T ss_pred CCeEEECCCCCCCEEEEEEEEEeCCCC-CCCcCeEeEeCCCc
Confidence 123478999999999999987755555 46788889997643
No 76
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.32 E-value=0.015 Score=50.79 Aligned_cols=95 Identities=9% Similarity=0.042 Sum_probs=57.0
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++. ..+.++++|+|........ ..-.|+|...+..... ...... .+.....
T Consensus 28 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~~-----------------~~~~~~~ 87 (130)
T 1wfo_A 28 PGPPMGILFP-EVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANT--ATVEVL-----------------APSARQY 87 (130)
T ss_dssp CCCCCCCEEE-EECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSC--CCEEEE-----------------CTTCCEE
T ss_pred CCCCCceEEE-ecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCce--EEEEEe-----------------CCCceEE
Confidence 4556556553 3357899999986532110 1235666544321100 000000 1234567
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+|++|+|++.|.+||......|...||....|+|.+.
T Consensus 88 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 88 TATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 8899999999999999875556666788888998764
No 77
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.29 E-value=0.014 Score=50.30 Aligned_cols=93 Identities=13% Similarity=-0.024 Sum_probs=54.6
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCC--CC-CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYG--IN-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~--~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
.|.+|..|.+. ..+.++++|.|..... .. -..-.|+|...++..+...... ....-
T Consensus 10 ~p~~P~~P~v~-~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~--------------------~~~~~ 68 (112)
T 1bpv_A 10 PIDPPGKPVPL-NITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS--------------------NILEN 68 (112)
T ss_dssp CCCCCCCCEEE-EEETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS--------------------CCCSS
T ss_pred CCCCCCCCEEE-EeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc--------------------cCccC
Confidence 35667777773 3457999999984321 11 1234678876544333221100 00112
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKAS 278 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~-~~~S~~~~F~T~ 278 (612)
..+++||+||+.|.|||......|. ..+|..-...|.
T Consensus 69 ~~~v~~L~p~t~Y~frV~A~N~~G~~s~~S~~~~~~t~ 106 (112)
T 1bpv_A 69 EFTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITC 106 (112)
T ss_dssp EEEECSCCSSCCEEEEEEEECTTSCEEEEEEEEEEECS
T ss_pred EEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEe
Confidence 3568999999999999998754554 445655555543
No 78
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.29 E-value=0.0053 Score=54.05 Aligned_cols=40 Identities=18% Similarity=0.305 Sum_probs=33.5
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
.++++||+|+|.|.+||......|...||+...++|.+.|
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 3678999999999999998765666678888999998754
No 79
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=96.27 E-value=0.027 Score=48.08 Aligned_cols=91 Identities=9% Similarity=0.031 Sum_probs=51.9
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCC--ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA--EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~--~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
.|.+|...++ ...+.+++.++|......... .-.|+|..+.. ..... .-...
T Consensus 7 ~Ps~v~~l~v-~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~--------~~~~~-----------------~~~t~ 60 (104)
T 2dle_A 7 GAIQVFDVTA-VNISATSLTLIWKVSDNESSSNYTYKIHVAGETD--------SSNLN-----------------VSEPR 60 (104)
T ss_dssp SCCBEEEEEE-EEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC--------EEEEE-----------------ESSSE
T ss_pred CCCCCceEEE-EEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC--------eEEEc-----------------CCCCE
Confidence 3444444444 344678999999866321111 23555553311 01100 01245
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
++|+||+|||.|.++|.... ++...-+....++|.|.|.
T Consensus 61 ~~i~gL~PgT~Y~~~V~A~~-~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 61 AVIPGLRSSTFYNITVCPVL-GDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp EECCSCCSSCEEEEEEEEES-SSCCCBCEEEEEECCCCSC
T ss_pred EEECCCCCCCEEEEEEEEEE-CCcccCCeeEEEEccCCCC
Confidence 78999999999999999863 2222223456778887653
No 80
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.26 E-value=0.013 Score=50.58 Aligned_cols=97 Identities=15% Similarity=0.075 Sum_probs=53.9
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCC-CCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
.-|.+|..+.+. ..+.++++|.|.-..+... ..-.|+|...+ ...+..... .. ++-.
T Consensus 16 ~~P~~P~~~~~~-~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~--~~-----------------~~~~ 75 (121)
T 1x4z_A 16 SPPEAPDRPTIS-TASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--AI-----------------PPSR 75 (121)
T ss_dssp CCCCCCCCCEEE-ECCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--EE-----------------CTTC
T ss_pred CCCccCCCCEEE-EccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeec--cc-----------------CCCc
Confidence 456677777663 3457899999984322110 12356676543 222211100 00 1123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEY-QFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~-~F~T~p~ 280 (612)
...++++|+|++.|.|||......|...+|..- .+++.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~ 116 (121)
T 1x4z_A 76 LSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCSS
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCCC
Confidence 456789999999999999876444433455433 3555443
No 81
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.24 E-value=0.013 Score=50.20 Aligned_cols=92 Identities=23% Similarity=0.366 Sum_probs=55.9
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCcc----EEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
-|.+|..+.+. ..+.++++|.|..... ...+ .|+|..... ..+. ..+. + ..
T Consensus 17 ~P~~P~~~~~~-~~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~-----~~~~------------~---~~- 72 (118)
T 1x3d_A 17 EPDIPNPPRIA-NRTKNSLTLQWKAPSD--NGSKIQNFVLEWDEGKGNGEFC-----QCYM------------G---SQ- 72 (118)
T ss_dssp CCCCCCCCEEE-EEETTEEEEECCCCCC--CSSCEEEEEEEECTTTSSSCCE-----EEEE------------E---SC-
T ss_pred CCcCCCCcEEe-ccCCCEEEEEECCCCC--CCCcceEEEEEEecCCCCCCeE-----Eeec------------c---CC-
Confidence 35566666552 3357899999987642 2223 344443322 1111 0111 0 11
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
...++++|+|++.|.|||......|...+|+...|+|.+.+
T Consensus 73 -~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~ 113 (118)
T 1x3d_A 73 -KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCS 113 (118)
T ss_dssp -SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCC
T ss_pred -cEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCC
Confidence 34578999999999999987655566668888889887643
No 82
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.21 E-value=0.028 Score=47.05 Aligned_cols=91 Identities=9% Similarity=-0.066 Sum_probs=55.7
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++ ...+.++++|+|....... -..-.|+|...+...+. .... . ...+
T Consensus 8 P~~P~~l~~-~~~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~------~~~~---------------~--~~~~ 63 (106)
T 2ed8_A 8 PGPVENLQA-VSTSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQ------NIEV---------------D--GLSY 63 (106)
T ss_dssp CCCCEEEEE-ECSSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEE------EEEE---------------C--SSCE
T ss_pred CcCCceeEE-EecCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceE------EEeC---------------C--ccEE
Confidence 455666655 3335789999998763210 11235566544322111 0000 0 1345
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+|++|+|++.|.+||......|...+|+...|+|...
T Consensus 64 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 64 KLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 7899999999999998775555556788889998654
No 83
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.08 E-value=0.015 Score=50.27 Aligned_cols=89 Identities=15% Similarity=0.051 Sum_probs=54.6
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCC--C--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGI--N--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~--~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
+|..+++ ...+.++++|+|...... . -..-.|+|...+..... ... .+-....
T Consensus 31 ~P~~l~~-~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~ 87 (124)
T 2ed9_A 31 PPQNVSL-EVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEM-----ETL-----------------EPNNLWY 87 (124)
T ss_dssp CCBSCCE-EEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCE-----EEE-----------------CSSCSEE
T ss_pred CCeeeEE-EEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcce-----EEe-----------------cCCcCEE
Confidence 3545554 223578999999876421 0 11234566554332111 000 1223456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
+|++|+|++.|.+||......|...||....|+|+.
T Consensus 88 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 88 LFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 799999999999999877555666789999999864
No 84
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=96.04 E-value=0.0069 Score=63.18 Aligned_cols=68 Identities=18% Similarity=0.225 Sum_probs=43.5
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC----------CCCEEEEcCccccCCCcccHHHHHHHhhhcc
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~----------~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
.+++++||+|.. ...+.++++... ++|.++++||++ +.|..+ .+....+..+
T Consensus 71 ~~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~v-drG~~s--~evl~~l~~l 132 (342)
T 2z72_A 71 KKVVALSDVHGQ---------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIF-DRGHQV--NEVLWFMYQL 132 (342)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCS-SSSSCH--HHHHHHHHHH
T ss_pred CCEEEEECCCCC---------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCc-CCCCCH--HHHHHHHHHH
Confidence 689999999843 234566665422 479999999999 445432 1222222222
Q ss_pred -----ccCCCeEEccCCCccC
Q 007227 357 -----ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 -----~~~vP~~~~~GNHD~~ 372 (612)
....+++.+.||||..
T Consensus 133 ~~~~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 133 DQQARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HHHHHHTTCEEEECCCHHHHH
T ss_pred HHHHhhCCCeEEEEecCCcHH
Confidence 2235689999999963
No 85
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=95.96 E-value=0.032 Score=45.35 Aligned_cols=35 Identities=17% Similarity=0.198 Sum_probs=24.1
Q ss_pred EEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEc
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGT-YIWSSEYQFKA 277 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~-~~~S~~~~F~T 277 (612)
.++++|+||+.|+|||......|. ...|....++|
T Consensus 53 ~~~~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v~T 88 (88)
T 1k85_A 53 ATISGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp EEECCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred EEeCCCCCCCEEEEEEEEEeCCCCcCCCCCCEEEEC
Confidence 468999999999999987643443 22345555544
No 86
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.95 E-value=0.015 Score=49.85 Aligned_cols=92 Identities=14% Similarity=0.139 Sum_probs=51.7
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCC---ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++ ...+.++++|+|..... .. .-.|+|...+...+. .... ..+-..
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~--~g~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~~ 73 (118)
T 2yrz_A 17 VPDTPTRLVF-SALGPTSLRVSWQEPRC--ERPLQGYSVEYQLLNGGELH------RLNI--------------PNPAQT 73 (118)
T ss_dssp CCCCCCCCEE-CCCBTTEEEEECCCCCC--SSCEEEEEEEEEBSSSCCEE------EEEE--------------SCTTCC
T ss_pred CCCCCCceEE-EeCCCCEEEEEeCCCCC--CCCccEEEEEEEECCCCceE------EEEc--------------CCCCcC
Confidence 3455666654 33457899999987642 11 123444443221110 0000 011234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSS-EYQFKASP 279 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~-~~~F~T~p 279 (612)
.++|++|+|++.|.+||......|...||. ...++|.+
T Consensus 74 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~ 112 (118)
T 2yrz_A 74 SVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV 112 (118)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence 567899999999999998775555555666 44444443
No 87
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.94 E-value=0.029 Score=47.97 Aligned_cols=40 Identities=20% Similarity=0.085 Sum_probs=32.8
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..++|++|+|++.|.+||......|...||+...|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 4568999999999999998775556667888889999754
No 88
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=95.88 E-value=0.044 Score=51.75 Aligned_cols=92 Identities=14% Similarity=0.120 Sum_probs=54.3
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCC------CCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYG------INEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~------~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
.+|..+.+ ...+.++++|+|..... .....-.|+|...+..... ..... +-.
T Consensus 6 ~~P~~l~~-~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~ 63 (211)
T 3p4l_A 6 MPPVGVQA-SILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK----YKNAN-----------------ATT 63 (211)
T ss_dssp CCCEEEEE-EECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CC----CEEEE-----------------ESS
T ss_pred CCCCCEEE-EecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcce----EEEeC-----------------CCc
Confidence 34555554 33457899999986421 0111245666654332110 00100 113
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
...+|++|+|++.|.+||......|...||....|+|.+.
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 4567899999999999998764445556788888998653
No 89
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=95.83 E-value=0.0088 Score=61.48 Aligned_cols=68 Identities=21% Similarity=0.254 Sum_probs=42.2
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCe
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~ 362 (612)
.+++++||+|.. ...+.++++.. ...+.++++||++ +.|..+ .+.+..+..+. ..-.+
T Consensus 50 ~~i~viGDIHG~---------------~~~L~~ll~~~~~~~~~~~vflGD~V-DRG~~s--~evl~lL~~lk~~~p~~v 111 (309)
T 2ie4_C 50 CPVTVCGDVHGQ---------------FHDLMELFRIGGKSPDTNYLFMGDYV-DRGYYS--VETVTLLVALKVRYRERI 111 (309)
T ss_dssp SSEEEECCCTTC---------------HHHHHHHHHHHCCTTTSCEEECSCCS-SSSTTH--HHHHHHHHHHHHHCTTTE
T ss_pred CCEEEEecCCCC---------------HHHHHHHHHHcCCCCCCEEEEeCCcc-CCCCCh--HHHHHHHHHHHhhCCCcE
Confidence 469999999843 23455565542 3467789999999 555433 12223332221 12358
Q ss_pred EEccCCCccC
Q 007227 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~~~GNHD~~ 372 (612)
+.+.||||..
T Consensus 112 ~~lrGNHE~~ 121 (309)
T 2ie4_C 112 TILRGNHESR 121 (309)
T ss_dssp EECCCTTSST
T ss_pred EEEeCCCCHH
Confidence 9999999975
No 90
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.81 E-value=0.023 Score=49.61 Aligned_cols=41 Identities=12% Similarity=0.067 Sum_probs=33.4
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
....+|++|+|++.|.+||......|...||....|+|.+.
T Consensus 76 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 76 QLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp CCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 45678899999999999998775555566888899999763
No 91
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.79 E-value=0.043 Score=46.22 Aligned_cols=92 Identities=13% Similarity=0.047 Sum_probs=51.0
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|...++. ..+.++++|+|.-... ...-.|+|...+...+.. ..... -++. .++|
T Consensus 9 ~~~P~~l~~~-~~~~~sv~lsW~~p~~--~~~Y~v~y~~~~~~~~~~---~~~~~---------------~~~~--~~~l 65 (104)
T 2dkm_A 9 LPPPRALTLA-AVTPRTVHLTWQPSAG--ATHYLVRCSPASPKGEEE---EREVQ---------------VGRP--EVLL 65 (104)
T ss_dssp CCCCCCCEEE-EECSSEEEEECCCCSS--CSEEEEEEEESSSCCSSC---CEEEE---------------ESSS--EEEE
T ss_pred CCCCceeEEE-ecCCCEEEEEEeCCCC--CCeEEEEEEECCCCCCcc---eEEEe---------------cCCC--EEEE
Confidence 4567666663 3356899999976532 123456666433211100 00000 0122 7889
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
+||+|+|.|.++|......+... .....++|.|.+
T Consensus 66 ~~L~p~t~Y~~~V~A~~~~~~s~-p~~~~~~T~p~~ 100 (104)
T 2dkm_A 66 DGLEPGRDYEVSVQSLRGPEGSE-ARGIRARTPTSG 100 (104)
T ss_dssp ESCCTTCCEEEEEEEECSSSBCC-CEEEECCCCCCS
T ss_pred CCCCCCCEEEEEEEEECCCCCCC-CEEEEEEcCCCC
Confidence 99999999999998763222111 123456676543
No 92
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.74 E-value=0.03 Score=48.77 Aligned_cols=41 Identities=15% Similarity=-0.167 Sum_probs=32.6
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|++.|.+||......|...||....|+|.+.
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 35678999999999999998765555556888888988754
No 93
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=95.74 E-value=0.039 Score=46.52 Aligned_cols=93 Identities=14% Similarity=0.073 Sum_probs=51.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|...++ ...+.+++.|+|.-... .-..-.|+|........ ...... ++-...++|
T Consensus 3 p~~P~~l~v-~~~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~~~~~l 60 (104)
T 2rb8_A 3 LDAPSQIEV-KDVTDTTALITWMPPSQ-PVDGFELTYGIKDVPGD---RTTIDL-----------------TEDENQYSI 60 (104)
T ss_dssp CCCCEEEEE-ESCCSSCEEEEEECCSS-CCSEEEEEEEETTCTTC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEE-EEecCCeEEEEEcCCCC-ccceEEEEEEECcCCCc---eEEEEc-----------------CCCcCEEEe
Confidence 456766665 33467899999976532 11223567754321110 000111 112235689
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
+||+||+.|.++|......|... .....|+|.+..
T Consensus 61 ~~L~p~t~Y~~~V~A~~~~g~s~-p~~~~~~T~~~~ 95 (104)
T 2rb8_A 61 GNLKPDTEYEVSLISRRGDMSSN-PAKETFTTGLAA 95 (104)
T ss_dssp CSCCTTCEEEEEEEEEETTEECC-CEEEEEECCC--
T ss_pred CCCCCCCEEEEEEEEEeCCccCC-CEEEEEECCCCc
Confidence 99999999999998763333211 234568887654
No 94
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=95.73 E-value=0.067 Score=59.11 Aligned_cols=129 Identities=15% Similarity=0.137 Sum_probs=70.9
Q ss_pred EEEEEEeecc--cceEEEEEecC---CCCcEEEEeccceec-cCCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccE
Q 007227 128 SLKLQLINQR--SDFSFVLFTNG---LLNPKVVAVSNKVTF-TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPF 199 (612)
Q Consensus 128 ~~~~~l~n~r--~~~~f~~~~~~---~~~p~~~a~s~~~~~-~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~ 199 (612)
..++.|-+.+ ..|.|.+.... ...| -..|..+.+ +.+.+|..+.+ ...+.++++|+|........ ..-.
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sp--s~~s~~v~v~T~~~~Ps~~~~-~~~s~tSV~LsW~pP~~~ng~I~~Y~ 475 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVT--SRSFRTASVSINQTEPPKVRL-EGRSTTSLSVSWSIPPPQQSRVWKYE 475 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCS--CCCEEEEEEECCSCCCCEEEE-EECCC-CCEEEEECCTTTTTTCSEEE
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCC--CCccceeEEeecccCCCCCce-eeccCCeEEEEEECCcCCCCcccEEE
Confidence 3445555655 46777776542 1111 011222222 24556777766 45567999999986532110 1235
Q ss_pred EEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 200 VEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 200 V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
|+|...+... ...... +-...++|+||+|+|.|.+||......|...||+...|+|.+
T Consensus 476 V~y~~~~~~~-----~~~~v~-----------------~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~ 533 (536)
T 3fl7_A 476 VTYRKKGDSN-----SYNVRR-----------------TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS 533 (536)
T ss_dssp EEEEEC--CC-----CCEEEE-----------------ESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC
T ss_pred EEEEECCCCc-----eEEEEc-----------------CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCC
Confidence 6676543320 001111 112356799999999999999877555666789999999987
Q ss_pred CC
Q 007227 280 YP 281 (612)
Q Consensus 280 ~~ 281 (612)
..
T Consensus 534 ~~ 535 (536)
T 3fl7_A 534 PE 535 (536)
T ss_dssp --
T ss_pred CC
Confidence 53
No 95
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=95.69 E-value=0.15 Score=52.33 Aligned_cols=40 Identities=18% Similarity=0.066 Sum_probs=31.1
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
...+|++|+|++.|.+||......|...+|.. .|+|++.|
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~-~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVY-EFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE-EEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceee-EecCCCCC
Confidence 45678999999999999997754555556654 89998876
No 96
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.66 E-value=0.028 Score=48.91 Aligned_cols=98 Identities=15% Similarity=0.100 Sum_probs=54.8
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccC---CCCCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPK---GGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~---~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
-|.+|..+.+ .....++++|.|.-..+.. -..-.|+|... +...+... ... . ..+.
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~-----~~~-~------------~~~~ 77 (124)
T 1wis_A 17 LPGPPTNLGI-SNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLI-----HQL-S------------NEPD 77 (124)
T ss_dssp CCCCCEEEEE-ESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEE-----EEE-E------------SCTT
T ss_pred CCccCCCCEE-EEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEe-----eeE-c------------cCCC
Confidence 4555655555 3346789999996553211 01235667652 11111110 000 0 0112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSE-YQFKASPYP 281 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~-~~F~T~p~~ 281 (612)
...+++++|+|++.|.+||......|...+|.. ..++|.+.+
T Consensus 78 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 78 ARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp CSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred ceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 345688999999999999987754455555653 457777653
No 97
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=95.64 E-value=0.014 Score=55.16 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=56.3
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCC--C-CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGI--N-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~--~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+.... .+++|+|...... . -..-.|+|...+...+.. ..+... ..+...
T Consensus 8 ~P~~P~~~~~~~~~--~s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~----~~~~~~-------------~~~~~~ 68 (209)
T 2vkw_A 8 TPSSPSIDQVEPYS--STAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS----KWYDAK-------------EASMEG 68 (209)
T ss_dssp CCCCCEEEEEEECS--SCEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEE----EEEEHH-------------HHHHHS
T ss_pred CCcCCcccEeeecc--CeEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceE----eEeecc-------------CCCccc
Confidence 45667666653332 3699999876321 1 122356666544322211 111100 001123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..++++|+|++.|.|||......|...+|....|+|.+.
T Consensus 69 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 69 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred eEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 567899999999999998765445556778888998764
No 98
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=95.62 E-value=0.012 Score=60.99 Aligned_cols=67 Identities=18% Similarity=0.200 Sum_probs=42.3
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhcc--ccCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++ +.|..+. +.+..+..+ ...-.++
T Consensus 58 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vflGD~V-DRG~~s~--evl~lL~~lk~~~p~~v~ 119 (330)
T 1fjm_A 58 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYV-DRGKQSL--ETICLLLAYKIKYPENFF 119 (330)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCS-SSSSCHH--HHHHHHHHHHHHSTTTEE
T ss_pred ceEEecCCCCC---------------HHHHHHHHHHhCCCCcceEEeCCCcC-CCCCChH--HHHHHHHHhhhhcCCceE
Confidence 58999999843 34566666652 3457799999999 5565331 222322222 1223589
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 120 ~lrGNHE~~ 128 (330)
T 1fjm_A 120 LLRGNHECA 128 (330)
T ss_dssp ECCCTTSSH
T ss_pred EecCCchHh
Confidence 999999964
No 99
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=95.58 E-value=0.018 Score=59.70 Aligned_cols=68 Identities=18% Similarity=0.281 Sum_probs=42.2
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcCC---CCEEEEcCccccCCCcccHHHHHHHhhhcc--ccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~~---pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP 361 (612)
.|++++||+|.. ...+.++++.... -+.++++||++ ++|..+ .+.+..+..+ ...-.
T Consensus 64 ~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~V-DRG~~s--~evl~lL~~lk~~~p~~ 125 (335)
T 3icf_A 64 VKISVCGDTHGQ---------------FYDVLNLFRKFGKVGPKHTYLFNGDFV-DRGSWS--CEVALLFYCLKILHPNN 125 (335)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTEEEEECSCCS-SSSTTH--HHHHHHHHHHHHHCTTT
T ss_pred ceEEEEecCCCC---------------HHHHHHHHHHcCCCCCCcEEEEeCCcc-CCCcCh--HHHHHHHHHHhhhCCCc
Confidence 689999999853 3456666665332 24699999999 555433 1222222221 11235
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++.+.||||..
T Consensus 126 v~llrGNHE~~ 136 (335)
T 3icf_A 126 FFLNRGNHESD 136 (335)
T ss_dssp EEECCCTTSSH
T ss_pred EEEecCchhhh
Confidence 88999999953
No 100
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.56 E-value=0.053 Score=46.43 Aligned_cols=92 Identities=13% Similarity=0.055 Sum_probs=52.1
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|...++ ...+.+++.|+|.-... .-..-.|+|...++... .... ++-...++
T Consensus 7 ~p~~P~~l~~-~~~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~-----~~~v-----------------~~~~t~~~ 62 (115)
T 2cuh_A 7 GPDGPTQLRA-LNLTEGFAVLHWKPPQN-PVDTYDIQVTAPGAPPL-----QAET-----------------PGSAVDYP 62 (115)
T ss_dssp CCSSCEEEEC-CCCSSSCEEEEEECCSS-CCSEEEEEEECSSSCCE-----EEEE-----------------ETTCSEEE
T ss_pred CCCCCcceEE-EeccCCeEEEEEECCCC-CccEEEEEEEcCCCCcE-----EEEE-----------------CCCccEEE
Confidence 4566765554 23357999999976532 11223466654332110 0110 11224578
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
|+||+|+|.|.++|......+... .....|+|.+.+
T Consensus 63 l~~L~P~t~Y~~~V~A~~~~~~s~-~~~~~~~T~~~~ 98 (115)
T 2cuh_A 63 LHDLVLHTNYTATVRGLRGPNLTS-PASITFTTGLEA 98 (115)
T ss_dssp ECSCCSSSEEEEEEEEEETTEECC-CEEEEEESCCCC
T ss_pred EeCCCCCCEEEEEEEEEeCCCcCC-CEEEEEEeCCCC
Confidence 999999999999998763222111 234678887543
No 101
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=95.55 E-value=0.07 Score=46.23 Aligned_cols=39 Identities=23% Similarity=0.210 Sum_probs=31.3
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
.++|++|+|+|.|.+||......|...+|....|+|.|.
T Consensus 68 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 68 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 567899999999999998765455556788888887764
No 102
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.54 E-value=0.051 Score=45.36 Aligned_cols=79 Identities=11% Similarity=0.119 Sum_probs=46.2
Q ss_pred CCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEE
Q 007227 179 VWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTY 256 (612)
Q Consensus 179 ~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Y 256 (612)
+.++++|.|....... -..-.|+|...+...+.. .... .-....+|++|+|++.|.+
T Consensus 19 ~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~~-----------------~~~~~~~i~~L~p~t~Y~~ 77 (107)
T 2dn7_A 19 AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNT----IDFG-----------------KDDQHFTVTGLHKGTTYIF 77 (107)
T ss_dssp STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEE----EEEE-----------------TTCCEEEEECCCTTCEEEE
T ss_pred CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEE----EEeC-----------------CCccEEEeCCCCCCCEEEE
Confidence 6789999998764211 112356666543322111 1111 1123567899999999999
Q ss_pred EEeeecCCCCccccceEEEEcCC
Q 007227 257 KLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 257 rv~~~~~~g~~~~S~~~~F~T~p 279 (612)
||......|...+|. ..|+|..
T Consensus 78 ~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 78 RLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEEEEETTEEEEEEE-EEEECCC
T ss_pred EEEEEcCCcccCCee-eEEeCCC
Confidence 998764444444555 4577753
No 103
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=95.53 E-value=0.2 Score=49.53 Aligned_cols=103 Identities=14% Similarity=0.066 Sum_probs=55.6
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|..+.+. ..+.++++|.|....+ ....-.|+|...++.... .... .+......|
T Consensus 113 ~~~P~~l~~~-~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~~~~i 169 (290)
T 3r8q_A 113 VSPPRRARVT-DATETTITISWRTKTE-TITGFQVDAVPANGQTPI----QRTI-----------------KPDVRSYTI 169 (290)
T ss_dssp CCCCEEEEEE-EECSSCEEEEEECCSC-CCCEEEEEEEESSSCCCE----EEEE-----------------CTTCSEEEE
T ss_pred CCCCceeEEE-EcCCCeEEEEEeCCCC-cccEEEEEEEECCCCcce----EEec-----------------CCCccEEEE
Confidence 4566655553 3357899999987632 122346666654322110 0111 111234678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEec
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGD 294 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
+||+|++.|.++|......|... .....++|.|.+. ..+++...++
T Consensus 170 ~~L~p~t~Y~~~V~A~n~~g~s~-~~~~~~~t~p~~P--~~l~~~~~~~ 215 (290)
T 3r8q_A 170 TGLQPGTDYKIYLYTLNDNARSS-PVVIDASTAIDAP--SNLRFLATTP 215 (290)
T ss_dssp CSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCC--EEEEEEEEET
T ss_pred CCCCCCCEEEEEEEEEeCCcccC-CEEEEecCCCCCC--CccEEEeeCC
Confidence 99999999999998753222211 1234556665432 2355554443
No 104
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.49 E-value=0.034 Score=47.62 Aligned_cols=93 Identities=17% Similarity=0.208 Sum_probs=52.9
Q ss_pred CCCCCCcc--eeeecCCCCcEEEEEEeCCCCCCCccE----EEEccCCCCCccccCcceEEeccccCCCCCccccccCCC
Q 007227 165 NPNAPVYP--RLAQGKVWNEMTVTWTSGYGINEAEPF----VEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (612)
Q Consensus 165 ~~~~P~~~--~La~~~~~~~m~V~W~T~~~~~~~~~~----V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 238 (612)
.|.+|..+ .+ ...+.++++|.|.-... ...+. |+|...+ ..+.. ... ..++
T Consensus 17 ~P~~P~~~~~~~-~~~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~-~~~~~------~~~-------------~~~~ 73 (121)
T 1wf5_A 17 LPHAPEHPVATL-STVERRAINLTWTKPFD--GNSPLIRYILEMSENN-APWTV------LLA-------------SVDP 73 (121)
T ss_dssp CCCCCSSCEEEE-CSSSTTEEEEECCCCCC--CSSCEEEEEEEEECTT-CCCEE------EES-------------SCCT
T ss_pred CCccCCCcceee-EeccCCEEEEEEcCCCC--CCCcceEEEEEEEcCC-CCceE------eEc-------------ccCC
Confidence 46677766 44 33357899999976532 22233 4444332 11110 000 0012
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCCC
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEY-QFKASPY 280 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~-~F~T~p~ 280 (612)
-....+++||+|++.|.+||......|...+|..- .++|++.
T Consensus 74 ~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 74 KATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred CccEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 23456789999999999999977545555566553 4666654
No 105
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.48 E-value=0.027 Score=47.59 Aligned_cols=84 Identities=13% Similarity=0.014 Sum_probs=46.1
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCcc----EEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
|.+|..+.+. ..+.++++|.|...... ...+ .|+|...+...+..... .+....
T Consensus 8 P~~P~~l~~~-~~~~~sv~l~W~~p~~~-g~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 65 (110)
T 2yuw_A 8 TSPPTLLTVD-SVTDTTVTMRWRPPDHI-GAAGLDGYVLEYCFEGTEDWIVANK--------------------DLIDKT 65 (110)
T ss_dssp SCCCEEEEEE-EECSSCEEEEEECCSSC-CSSCEEEEEEEEEETTCSSEEECCS--------------------SCCCSS
T ss_pred CCCCCccEEE-eccCCeEEEEECCCCCC-CCCCccEEEEEEEECCCccceEecc--------------------ccCccC
Confidence 4556555542 33578999999875421 1122 45555443322211100 011123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSS 271 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~ 271 (612)
..++++|+|++.|.|||......|...+|.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 95 (110)
T 2yuw_A 66 KFTITGLPTDAKIFVRVKAVNAAGASEPKY 95 (110)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCcC
Confidence 457899999999999998764334333443
No 106
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.45 E-value=0.018 Score=49.20 Aligned_cols=94 Identities=16% Similarity=0.131 Sum_probs=51.7
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+. ..+.++++|.|....... -..-.|+|...+. ..+... .. .....
T Consensus 15 ~P~~P~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-----~~----------------~~~~~ 72 (117)
T 1uem_A 15 LPGPPSKPQVT-DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTV-----AN----------------HVKTT 72 (117)
T ss_dssp SCBCCCCCEEE-EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEE-----EE----------------EECSS
T ss_pred CccCCCCCEEE-EecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEc-----cc----------------ccCcC
Confidence 45566666663 345789999997653211 0113455554321 111100 00 00112
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEE-EEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQ-FKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~-F~T~p~ 280 (612)
..++++|+|++.|.|||......|...+|..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 457899999999999998764444444555444 666654
No 107
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=95.38 E-value=0.086 Score=50.75 Aligned_cols=100 Identities=14% Similarity=0.028 Sum_probs=55.2
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++. ..+.++++|.|.-..... -..-.|+|...++...... ...... ........
T Consensus 98 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~-~~~~~~--------------~~~~~~~~ 161 (234)
T 3f7q_A 98 VPSEPGRLAFN-VVSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPIG-PMKKVL--------------VDNPKNRM 161 (234)
T ss_dssp CCCCCCCCEEE-ECSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBSS-CCEECC--------------CSCTTCCE
T ss_pred CCCCCCccEEE-EecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCccC-cceEEE--------------ecCCcceE
Confidence 35556666553 345789999998653211 0123566665433211100 000000 00112345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSS-EYQFKASPY 280 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~-~~~F~T~p~ 280 (612)
.+|+||+|++.|.+||......|...+|. ...|+|.+.
T Consensus 162 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 162 LLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp EEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCC
Confidence 67999999999999998765445445665 467887654
No 108
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=95.37 E-value=0.019 Score=58.97 Aligned_cols=68 Identities=16% Similarity=0.235 Sum_probs=41.7
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC---CCCEEEEcCccccCCCcccHHHHHHHhhhcc--ccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~---~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP 361 (612)
.|++++||+|.. ...+.++++... ..+.++++||++ +.|..+ .+-...+..+ ...-.
T Consensus 60 ~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~V-DRG~~s--~evl~lL~~lk~~~p~~ 121 (315)
T 3h63_A 60 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFV-DRGSFS--VEVILTLFGFKLLYPDH 121 (315)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCS-SSSTTH--HHHHHHHHHHHHHSTTT
T ss_pred ceEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCcc-CCCcCh--HHHHHHHHHhhhhcCCc
Confidence 689999999853 344566666532 235699999999 555432 1222222221 11235
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++.+.||||..
T Consensus 122 v~~lrGNHE~~ 132 (315)
T 3h63_A 122 FHLLRGNHETD 132 (315)
T ss_dssp EEEECCTTSSH
T ss_pred EEEEecCcccc
Confidence 88999999964
No 109
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.30 E-value=0.09 Score=44.97 Aligned_cols=91 Identities=14% Similarity=0.115 Sum_probs=51.9
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
.+|...++ ...+.++++|+|..... .-..-.|+|...++.... .... ++-...+.|+
T Consensus 9 ~pP~~l~~-~~vt~tsi~vsW~pp~~-~i~~Y~I~y~~~~~~~~~----~~~v-----------------~~~~t~~~l~ 65 (108)
T 2ee3_A 9 APPRHLGF-SDVSHDAARVFWEGAPR-PVRLVRVTYVSSEGGHSG----QTEA-----------------PGNATSAMLG 65 (108)
T ss_dssp CCSSCEEE-ESCCSSCEEEEESCCSS-CCSEEEEEEEETTTCCBC----CEEE-----------------ETTCCEEEEC
T ss_pred CCCceEEE-EEccCCeEEEEeeCCCC-CccEEEEEEEeCCCCcee----EEEc-----------------CCCcCEEEcC
Confidence 45666665 34468999999976532 122346777654332110 0110 1122457899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
||+|+|.|..+|..-...|...-+ ...|+|.+.|
T Consensus 66 ~L~p~T~Y~v~V~A~~~~g~s~p~-~~~~~T~~vP 99 (108)
T 2ee3_A 66 PLSSSTTYTVRVTCLYPGGGSSTL-TGRVTTKKAP 99 (108)
T ss_dssp SCCSSCEEEEEEEEECTTSCEEEE-EEEEECCCCC
T ss_pred CCCCCCEEEEEEEEEeCCCcCCCc-cCEEEeCCCC
Confidence 999999999999875333322212 3468887433
No 110
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=95.28 E-value=0.19 Score=54.31 Aligned_cols=143 Identities=11% Similarity=0.157 Sum_probs=77.7
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHH----------hcCCCCEEEEcCccccCCCc------------
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQ----------DLKNIDIVFHIGDICYANGY------------ 342 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~----------~~~~pdfvl~~GDi~Y~~g~------------ 342 (612)
...++++++|++.+.... .+ ...++.+...+. ...++.-+|++||.+...+.
T Consensus 199 ~~~~ialVSGL~igs~~~--~~----~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~ 272 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGG--ES----LLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLT 272 (476)
T ss_dssp SCCEEEEECCCCBTSSCH--HH----HHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CH
T ss_pred CCCEEEEECCcccCCCcc--cc----hHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccc
Confidence 346899999999986310 00 011222222221 12568899999999965321
Q ss_pred -------ccHHHHHHHhhhccccCCCeEEccCCCccCCCCCCCCCCCCCCCCcccccccc---ccccCCCCCCceEEEEE
Q 007227 343 -------ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNMDSGGECGVLVEN---MFYVPTENRAKFWYSTD 412 (612)
Q Consensus 343 -------~~~wd~f~~~i~~l~~~vP~~~~~GNHD~~~~~~~~~y~~~dsgge~g~~~~~---~f~~P~~~~~~~yYsfd 412 (612)
..+.+++.+.+..+...+|+.++|||||-.... -....-.+|-.+-.. .+..- .|. |.|+
T Consensus 273 ~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~~-----lPQqplh~~lfp~s~~~~~~~~v----tNP-~~~~ 342 (476)
T 3e0j_A 273 KKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYT-----LPQQPLHPCMFPLATAYSTLQLV----TNP-YQAT 342 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCSS-----SSCCCCCTTSCHHHHTSTTEEEC----CSS-EEEE
T ss_pred cccchhhHHHHHHHHHHHHhcccCceEEecCCCCCccccc-----CCCCCcCHHHhhhhhhcCccEEe----CCC-eEEE
Confidence 023344455566677899999999999964210 001111112111101 11111 222 4689
Q ss_pred eCCEEEEEEcCCC--C---CCCCHHHHHHHHHHHhh
Q 007227 413 YGMFRFCIADTEQ--D---WREGTEQYRFIEHCLAS 443 (612)
Q Consensus 413 ~G~v~Fi~LDT~~--~---~~~g~~Q~~WL~~~L~~ 443 (612)
+++++|++..... + +.+.+.-++.|++.|+-
T Consensus 343 i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 343 IDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp ETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred ECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 9999998776432 1 12233457788888875
No 111
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=95.25 E-value=0.02 Score=58.48 Aligned_cols=67 Identities=18% Similarity=0.200 Sum_probs=41.6
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhcc--ccCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~~~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++ +.|..+. +....+..+ ...-.++
T Consensus 57 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vfLGD~V-DrG~~s~--evl~lL~~lk~~~p~~v~ 118 (299)
T 3e7a_A 57 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYV-DRGKQSL--ETICLLLAYKIKYPENFF 118 (299)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCS-SSSSCHH--HHHHHHHHHHHHSTTTEE
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhCCCCCccEEeCCccc-CCCCCcH--HHHHHHHHHHhhCCCcEE
Confidence 48999999853 34566666653 3457788999999 5554321 222222211 1223589
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 119 ~lrGNHE~~ 127 (299)
T 3e7a_A 119 LLRGNHECA 127 (299)
T ss_dssp ECCCTTSSH
T ss_pred EEecCchhh
Confidence 999999964
No 112
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.23 E-value=0.11 Score=43.73 Aligned_cols=91 Identities=20% Similarity=0.187 Sum_probs=51.6
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|...++ ...+.+++.|+|.-... .-..-.|+|...++. .. ... .++-...++
T Consensus 7 ~p~~P~~l~v-~~~~~~sv~lsW~~p~~-~i~~Y~i~y~~~~~~-~~------~~~---------------~~~~~ts~~ 62 (105)
T 2cum_A 7 GLEAPRDLEA-KEVTPRTALLTWTEPPV-RPAGYLLSFHTPGGQ-TQ------EIL---------------LPGGITSHQ 62 (105)
T ss_dssp TCCCCEEEEE-ESCCSSCEEEEEECCSS-CCSEEEEEEECTTSC-EE------EEE---------------ECSSCSEEE
T ss_pred CCCCCCceEE-EeccCCEEEEEEcCCCC-ccceEEEEEEeCCCc-eE------EEE---------------ECCCccEEE
Confidence 4556666555 23357899999976532 111235667643321 10 000 011234578
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
|+||+|++.|.++|......|... .....|+|...
T Consensus 63 l~~L~p~t~Y~~~V~A~~~~g~s~-~~~~~~~T~~~ 97 (105)
T 2cum_A 63 LLGLFPSTSYNARLQAMWGQSLLP-PVSTSFTTGGL 97 (105)
T ss_dssp ECSCCTTCEEEEEEEEEBTTBCCC-CEEEEEECCCS
T ss_pred ECCCCCCCEEEEEEEEEeCCcccC-CEEEEEEeCCc
Confidence 999999999999998763222211 23567887643
No 113
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.18 E-value=0.054 Score=48.70 Aligned_cols=40 Identities=18% Similarity=0.008 Sum_probs=31.9
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..++|+||+|+|.|..||......|...+|+...|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 5678999999999999998764344455788889999864
No 114
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=95.11 E-value=0.096 Score=50.41 Aligned_cols=90 Identities=17% Similarity=0.193 Sum_probs=55.2
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
.+|..+.+ ...+.++++|+|.-..+ ....-.|+|...++.... ..... +.....+|+
T Consensus 7 ~~P~~l~~-~~~~~~si~l~W~~p~g-~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~~~i~ 63 (234)
T 3f7q_A 7 GAPQNPNA-KAAGSRKIHFNWLPPSG-KPMGYRVKYWIQGDSESE----AHLLD-----------------SKVPSVELT 63 (234)
T ss_dssp CCCEEEEE-EECSSSCEEEEEECCSS-CCCEEEEEEEETTSCGGG----CEEEE-----------------ESSSEEEEC
T ss_pred CCCcceEE-EEcCCCEEEEEEECCCC-ccceEEEEEEECCCCccc----eEEEc-----------------CCccEEEEC
Confidence 45655555 33457899999987632 222345677654332111 01110 112356789
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
+|+|++.|.++|......|...+|....|+|..
T Consensus 64 ~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~ 96 (234)
T 3f7q_A 64 NLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQ 96 (234)
T ss_dssp SCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred CCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCC
Confidence 999999999999876444555577788898874
No 115
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=95.09 E-value=0.2 Score=49.41 Aligned_cols=38 Identities=16% Similarity=0.184 Sum_probs=30.8
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
...+|+||+||+.|.++|......| ..+|....|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeecCC
Confidence 3567999999999999998764445 4578899999975
No 116
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=95.08 E-value=0.23 Score=50.84 Aligned_cols=92 Identities=18% Similarity=0.238 Sum_probs=51.8
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
.-|.+|..+.+. ..+.+++.|.|..... ....-.|+|...++... ...... ++-....
T Consensus 274 t~p~~P~~l~~~-~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~ 331 (368)
T 1fnf_A 274 TVSDVPRDLEVV-AATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTA 331 (368)
T ss_dssp CCCCSCEEEEEE-EEETTEEEEEEECCSS-CCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCCEE
T ss_pred CCCCCCCeeEEE-ecCCCEEEEEeeCCCC-ccceEEEEEEECCCCCc---cEEEEc-----------------CCCeeEE
Confidence 345566555542 2356899999987643 11234566665433210 001111 1123456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccc---eEEEEc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSS---EYQFKA 277 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~---~~~F~T 277 (612)
+++||+||+.|.|+|......|...+|. ..+|+|
T Consensus 332 ~~~~L~p~t~Y~~~V~A~~~~G~g~~s~~~~~i~~~T 368 (368)
T 1fnf_A 332 TISGLKPGVDYTITVYAVTGRGDSPASSKPISINYRT 368 (368)
T ss_dssp EECSCCTTCCEEEEEEEECCCSSSCCBCCCEEEEECC
T ss_pred EecCCCCCCEEEEEEEEeCCCCcCcccCceeeeeeeC
Confidence 7899999999999998775445444543 344543
No 117
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.01 E-value=0.066 Score=46.37 Aligned_cols=40 Identities=13% Similarity=0.003 Sum_probs=33.3
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
.++|++|+|++.|.+||......|...||+...|+|++..
T Consensus 80 ~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~~ 119 (124)
T 2dbj_A 80 RARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAHS 119 (124)
T ss_dssp CEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCSC
T ss_pred eEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCC
Confidence 5578999999999999987755566678999999998753
No 118
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.00 E-value=0.12 Score=45.07 Aligned_cols=41 Identities=12% Similarity=0.010 Sum_probs=33.3
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|..+|..-...|...+|+...|+|+..
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred cCEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCC
Confidence 35678999999999999998765456667888899999754
No 119
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=94.97 E-value=0.13 Score=43.11 Aligned_cols=91 Identities=14% Similarity=0.129 Sum_probs=51.4
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCC--CC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYG--IN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~--~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
+|....+ -..+.+++.|+|..... .+ -..-.|.|...+...... ....+.. +-...+
T Consensus 7 ~P~~~~~-~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~-~~~~~v~-----------------~~~~~~ 67 (102)
T 3n1f_C 7 GPHIAYT-EAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSD-YKRDVVE-----------------GSKQWH 67 (102)
T ss_dssp CCEEEEE-EECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGG-CEEEEEE-----------------TTCSEE
T ss_pred CCceeEE-EEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCc-eEEEEEc-----------------CCceEE
Confidence 3444443 23457899999987531 00 012357777654321000 0011111 111245
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
+|++|+|+|.|..+|..-...|....|....++|
T Consensus 68 ~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 68 MIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred ECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 8999999999999998764445556677777777
No 120
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=94.97 E-value=0.25 Score=46.55 Aligned_cols=95 Identities=15% Similarity=0.110 Sum_probs=56.0
Q ss_pred CCCCCCcceeeecC-----CCCcEEEEEEeCCCCCC--CccEEEEc-cCCCCCccccCcceEEeccccCCCCCccccccC
Q 007227 165 NPNAPVYPRLAQGK-----VWNEMTVTWTSGYGINE--AEPFVEWG-PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (612)
Q Consensus 165 ~~~~P~~~~La~~~-----~~~~m~V~W~T~~~~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 236 (612)
.|.+|..+.+.... ..++++|+|........ -.-.|+|. ..+...+... ...
T Consensus 108 ~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~~~~~~l~Y~v~y~~~~~~~~w~~~---~~~----------------- 167 (215)
T 1cd9_B 108 KLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKPSEYMEQECELRYQPQLKGANWTLV---FHL----------------- 167 (215)
T ss_dssp CCCCCEEEECCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSTTCCCEEE---EEE-----------------
T ss_pred EeCCCcEEEEEEeccccCCCCCeEEEEEeCCCCCCeEEEEEEEEEccCCCCCCcEEE---ecc-----------------
Confidence 46677666554321 47889999987532000 12356666 4333222110 000
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCC
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASP 279 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~---~~S~~~~F~T~p 279 (612)
.+......|.+|+|+++|..||......|.. .||+...|+|+.
T Consensus 168 ~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~wS~wS~~~~~~T~e 213 (215)
T 1cd9_B 168 PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFWSPWSPGLQLRPTM 213 (215)
T ss_dssp ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCCCCCCCCEEECCCC
T ss_pred cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCCcCCCCccceecCC
Confidence 1123567899999999999999876433332 477888898864
No 121
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=94.96 E-value=0.026 Score=58.93 Aligned_cols=67 Identities=19% Similarity=0.270 Sum_probs=41.3
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++ ++|..+. +-...+..+. ..-.++
T Consensus 71 pi~ViGDIHG~---------------~~dL~~ll~~~g~~~~~~~vfLGD~V-DRG~~s~--Evl~lL~~lk~~~p~~v~ 132 (357)
T 3ll8_A 71 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYV-DRGYFSI--ECVLYLWALKILYPKTLF 132 (357)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCS-SSSTTHH--HHHHHHHHHHHHCTTTEE
T ss_pred cceeeccCCCC---------------HHHHHHHHHhcCCCCCcEEEECCCcc-CCCcChH--HHHHHHHHhhhhcCCcEE
Confidence 48999999853 33455566542 3467899999999 5554331 2222222211 123478
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 133 llrGNHE~~ 141 (357)
T 3ll8_A 133 LLRGNHECR 141 (357)
T ss_dssp ECCCTTSSH
T ss_pred EEeCchhhh
Confidence 999999964
No 122
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=94.91 E-value=0.15 Score=42.44 Aligned_cols=74 Identities=20% Similarity=0.234 Sum_probs=44.4
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+.+. ..+.++++|+|.-... .-..-.|+|...+..... .... .++-.-.++|
T Consensus 2 p~~P~~l~~~-~~~~~sv~lsW~pP~~-~i~~Y~v~y~~~~~~~~~---~~~~-----------------~~~~~t~~~i 59 (100)
T 3b83_A 2 LQPPFNIKVT-NITLTTAVVTWQPPIL-PIEGILVTFGRKNDPSDE---TTVD-----------------LTSSITSLTL 59 (100)
T ss_dssp CCCCEEEEEE-SCCSSCEEEEEECCSS-CCSEEEEEEEESSCTTTC---EEEE-----------------ECTTEEEEEE
T ss_pred CccCCccEEE-EecCCEEEEEEcCCcc-cCCEEEEEEEECCCCCCc---eEEE-----------------ECCcceEEEE
Confidence 4456666653 3457899999986632 112245677644321100 0000 0123456789
Q ss_pred cCCCCCCEEEEEEeee
Q 007227 246 RELWPNAMYTYKLGHR 261 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (612)
+||+|+|.|.+||...
T Consensus 60 ~~L~p~t~Y~~~V~A~ 75 (100)
T 3b83_A 60 TNLEPNTTYEIRIVAR 75 (100)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999876
No 123
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=94.88 E-value=0.067 Score=45.23 Aligned_cols=85 Identities=14% Similarity=0.082 Sum_probs=46.1
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+. ..+.++++|+|.-..... -..-.|+|...+...+..... .+.-..
T Consensus 8 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 66 (111)
T 1x5y_A 8 PTSAPQHLTVE-DVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK--------------------EPVERC 66 (111)
T ss_dssp CCCCCEEEEEE-EECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS--------------------SCBSSS
T ss_pred CCcCCCCCEEE-eccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccc--------------------cCCccc
Confidence 34555555542 335789999998754211 112345665443322211100 011123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcccc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWS 270 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S 270 (612)
..++++|+|++.|.|||......|...+|
T Consensus 67 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S 95 (111)
T 1x5y_A 67 GFTVKDLPTGARILFRVVGVNIAGRSEPA 95 (111)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCc
Confidence 45789999999999999976433333334
No 124
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=94.85 E-value=0.15 Score=43.94 Aligned_cols=82 Identities=16% Similarity=0.349 Sum_probs=41.9
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCcc----EEEEccCC-CCCccccCcceEEeccccCCCCCcccccc-CCCeEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWR-DPGYIH 241 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~-~~g~~h 241 (612)
.|..|.+ ...+.++++|.|.-+.. ...+ .|+|...+ ...+........+... -|. ..+-..
T Consensus 5 pP~~P~v-~~~~~~sv~L~W~~P~~--~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~----------~~~~~~~~~~ 71 (115)
T 2ic2_A 5 PPTPPNV-TRLSDESVMLRWMVPRN--DGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKP----------KWNSELGKSF 71 (115)
T ss_dssp CCCCCEE-EECC---EEEEEEEECC--SSCCEEEEEEEEEECC---CCEEEEEEEECCSC----------SCSSSSEEEE
T ss_pred CCCcCEe-EEEeCCEEEEEEcCCCC--CCCCCceEEEEEEECCCCCCceECccccccccc----------ccccccCcee
Confidence 3444554 34467999999987643 2233 45565542 2222221111111100 000 123345
Q ss_pred EEEecCCCCCCEEEEEEeeec
Q 007227 242 TGFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
.++++||+|++.|.+||....
T Consensus 72 ~~~v~~L~p~t~Y~FRV~A~N 92 (115)
T 2ic2_A 72 TASVTDLKPQHTYRFRILAVY 92 (115)
T ss_dssp EEEECSCCSSEEEEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEEEe
Confidence 678999999999999998763
No 125
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.78 E-value=0.18 Score=43.39 Aligned_cols=96 Identities=15% Similarity=0.117 Sum_probs=50.8
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCcc---ccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTY---SPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~---~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
+|...++ ...+.++++|+|....+ .-..-.|+|....+.... ......... -++-...++
T Consensus 11 ~p~~L~v-~~~T~~Si~LsW~~p~g-~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~---------------v~~~~t~~~ 73 (112)
T 2cui_A 11 RLSQLSV-TDVTTSSLRLNWEAPPG-AFDSFLLRFGVPSPSTLEPHPRPLLQRELM---------------VPGTRHSAV 73 (112)
T ss_dssp CCCCCEE-ESCCSSCEEEECCCCTT-SCSEEEEEEECCCCSSSCCCSSCCCCEEEE---------------EETTCCEEE
T ss_pred CCCceEE-EeecCCeEEEEECCCCC-CccEEEEEEEeCCCCccccccccCcceEEE---------------cCCCcCEEE
Confidence 3444444 23368999999986532 123456778754321000 000000000 012234688
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYP 281 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~ 281 (612)
|+||+|||+|..+|......+. .-.-....+|.+.+
T Consensus 74 l~gL~PgT~Y~~~V~A~~~~~~-s~p~~~~~~T~~~~ 109 (112)
T 2cui_A 74 LRDLRSGTLYSLTLYGLRGPHK-ADSIQGTARTLSGP 109 (112)
T ss_dssp ECSCCTTCEEEEEEEEECSSSE-EEEEEEEEECCCCS
T ss_pred eCCCCCCCEEEEEEEEEECCcc-cCCEEEEEEECCCC
Confidence 9999999999999987632221 11234566777654
No 126
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=94.75 E-value=0.086 Score=48.52 Aligned_cols=75 Identities=16% Similarity=0.192 Sum_probs=43.2
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
.|.+|..+.+. ..+.+++.|+|....... ...-.|+|...+...+.. ... .-..
T Consensus 102 ~p~~p~~~~~~-~~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~-----------------~~~~ 158 (197)
T 3lpw_A 102 RPLPPGKITLM-DVTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWAT-----CAT-----------------VKVT 158 (197)
T ss_dssp CCCCCSCEEEE-EECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEE-----EEE-----------------ESSS
T ss_pred CCCCCcccEEE-eccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEE-----eec-----------------cccc
Confidence 45566666542 335789999998753211 112355665443322111 000 0112
Q ss_pred EEEecCCCCCCEEEEEEeeec
Q 007227 242 TGFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
..++++|+|++.|.|+|....
T Consensus 159 ~~~~~~L~p~t~Y~~~V~A~n 179 (197)
T 3lpw_A 159 EATITGLIQGEEYSFRVSAQN 179 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEE
T ss_pred EEEeCCcCCCCEEEEEEEEEe
Confidence 357899999999999999764
No 127
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=94.74 E-value=0.19 Score=47.23 Aligned_cols=103 Identities=9% Similarity=-0.088 Sum_probs=53.7
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+.+ ...+.++++|.|....+.....-.|+|...+..... ...... +-....++++
T Consensus 25 ~P~~l~~-~~~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~---~~~~~~-----------------~~~~~~~i~~ 83 (203)
T 2gee_A 25 QPTDLSF-VDITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPI---FEDFVD-----------------SSVGYYTVTG 83 (203)
T ss_dssp CCEEEEE-ECCTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCC---EEEEEE-----------------TTCCEEEECS
T ss_pred CCCccEE-EecCCCEEEEEecCCCCCCccEEEEEEEECCCCCCc---eeEEcC-----------------CCccEEEeCC
Confidence 3443333 233578999999876431112335666654332110 000110 1123567899
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEec
Q 007227 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGD 294 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
|+|++.|.++|...... +.|....+++...+.....+++...++
T Consensus 84 L~p~t~Y~~~V~a~~~~---g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 84 LEPGIDYDISVYTVKNG---GESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp CCTTCEEEEEEEEESSS---CBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred CCCCCEEEEEEEEEeCC---CccccEeeeecCCCcCCCceEEEEcCC
Confidence 99999999999876322 235544555433222223355555544
No 128
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.73 E-value=0.063 Score=46.14 Aligned_cols=40 Identities=23% Similarity=0.144 Sum_probs=32.3
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
..++|+||+|+|.|.+||......|...+|....|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 4678999999999999998765455556888889998754
No 129
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=94.69 E-value=0.21 Score=46.93 Aligned_cols=73 Identities=19% Similarity=0.286 Sum_probs=42.5
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+.+ ...+.++++|+|....+..-..-.|+|....+... ...... ++-...++|+|
T Consensus 116 ~P~~l~~-~~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i~~ 174 (203)
T 2gee_A 116 PPTDLRF-TNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEED---VAELSI-----------------SPSDNAVVLTN 174 (203)
T ss_dssp CCEEEEE-EEEETTEEEEEEECCSSCCCSEEEEEEEETTCGGG---CEEEEE-----------------CTTCCEEEECS
T ss_pred CCCceEE-EEcCCCEEEEEEcCCCCCCccEEEEEEEECCCCCc---cEEEEc-----------------CCCcCEEEECC
Confidence 4555554 23356899999988642111234566765332110 000111 12234568899
Q ss_pred CCCCCEEEEEEeee
Q 007227 248 LWPNAMYTYKLGHR 261 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~ 261 (612)
|+|++.|.++|...
T Consensus 175 L~p~t~Y~~~V~A~ 188 (203)
T 2gee_A 175 LLPGTEYVVSVSSV 188 (203)
T ss_dssp CCTTCEEEEEEEEE
T ss_pred CCCCCEEEEEEEEe
Confidence 99999999999876
No 130
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=94.67 E-value=0.15 Score=48.00 Aligned_cols=42 Identities=24% Similarity=0.235 Sum_probs=32.7
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
...+|.+|+|++.|.|||.....-|...+|....|+|+|..|
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 456789999999999999877555666778888999988654
No 131
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=94.67 E-value=0.1 Score=49.29 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=56.5
Q ss_pred CCCCCCcceeeec-CCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQG-KVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~-~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
.|.+|..+.+... .+.+++.|.|....... ...-.|+|...++..+...... + ..+...
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~~------~------------~~~~~~ 164 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------D------------TASTRS 164 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG------G------------GCSCCS
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEeccc------c------------ccCccc
Confidence 4566766666432 25789999998653210 0123556655432222111000 0 012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~---~~S~~~~F~T~p~ 280 (612)
..+|++|+|+|.|.+||......|.. .||+...++|.+.
T Consensus 165 ~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~~ 206 (215)
T 1bqu_A 165 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 206 (215)
T ss_dssp EEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECCC
T ss_pred eEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccccccccc
Confidence 56789999999999999976444443 3667788888653
No 132
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=94.63 E-value=0.19 Score=47.13 Aligned_cols=90 Identities=17% Similarity=0.046 Sum_probs=50.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+.+ ...+.++++|+|....... -..-.|+|... ...+.. .... ++.....
T Consensus 110 P~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~-~~~~~~---~~~~-----------------~~~~~~~ 167 (209)
T 2vkw_A 110 PSAPKLEGQ-MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRAL-SSEWKP---EIRL-----------------PSGSDHV 167 (209)
T ss_dssp CCCCEEEEE-ECTTSSCEEEEEECCCCTTSCCCEEEEEEEET-TSCCCC---CEEE-----------------CTTCCEE
T ss_pred CCCCccccc-ccccCCeEEEEEECcccCCCCCceEEEEEECC-CCCCce---eeec-----------------CCCccEE
Confidence 455544332 2346789999999763211 11235666652 111110 0110 1122346
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
+|++|+|++.|.+||......|...+|+...+++
T Consensus 168 ~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~ 201 (209)
T 2vkw_A 168 MLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 201 (209)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EecCCCCCCEEEEEEEEEeCCccCCcchhhhhhh
Confidence 7999999999999998775445555666655554
No 133
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.58 E-value=0.052 Score=47.10 Aligned_cols=37 Identities=16% Similarity=0.098 Sum_probs=28.1
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSE-YQFKASPY 280 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~-~~F~T~p~ 280 (612)
.+.+|+|++.|.+||......|...+|.. ..|+|.+.
T Consensus 77 ~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 77 AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 36799999999999997755555566766 47888654
No 134
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=94.54 E-value=0.24 Score=49.83 Aligned_cols=133 Identities=11% Similarity=0.102 Sum_probs=71.5
Q ss_pred cceEEEEEE--eecccceEEEEEecCCCCcEEEEeccceec-----cCCCCCCcceeeecC-----CCCcEEEEEEeCCC
Q 007227 125 GKGSLKLQL--INQRSDFSFVLFTNGLLNPKVVAVSNKVTF-----TNPNAPVYPRLAQGK-----VWNEMTVTWTSGYG 192 (612)
Q Consensus 125 g~~~~~~~l--~n~r~~~~f~~~~~~~~~p~~~a~s~~~~~-----~~~~~P~~~~La~~~-----~~~~m~V~W~T~~~ 192 (612)
|..+.+|.. +..-..|.|.+......- ...|..+.| .-|.+|..+.+.... ..+++.|+|.....
T Consensus 158 ~~~~~~~~~~~L~~~~~Y~f~V~A~N~~G---~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~ 234 (313)
T 2d9q_B 158 GQSHCSIPRKHLLLYQNMGIWVQAENALG---TSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP 234 (313)
T ss_dssp TCSEEEEEGGGCCSSSCEEEEEEEEETTE---EEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGG
T ss_pred CCcEEEECccccccceeEEEEEEEECCCC---CccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCC
Confidence 444556554 223356777766531110 011222222 236667655543321 46899999987532
Q ss_pred CCC--CccEEEEc-cCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCc--
Q 007227 193 INE--AEPFVEWG-PKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTY-- 267 (612)
Q Consensus 193 ~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~-- 267 (612)
... -.-.|+|. ..+...+.... . ..+..+...|.+|+|+|.|..||......|..
T Consensus 235 ~~~~~l~Y~v~y~~~~~~~~w~~~~---~-----------------~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~w 294 (313)
T 2d9q_B 235 GLHINQKCELRHKPQRGEASWALVG---P-----------------LPLEALQYELCGLLPATAYTLQIRCIRWPLPGHW 294 (313)
T ss_dssp GTTSCEEEEEEEEESSSCCCCEEEE---E-----------------ECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCC
T ss_pred CCceeEEEEEEEccCCCCCCcEEcc---c-----------------ccCcceEEEEeCCCCCCeEEEEEEeeECCCCCcc
Confidence 111 12456776 44333322110 0 01234667899999999999999976433333
Q ss_pred -cccceEEEEcCCC
Q 007227 268 -IWSSEYQFKASPY 280 (612)
Q Consensus 268 -~~S~~~~F~T~p~ 280 (612)
.||+...|+|+..
T Consensus 295 S~wS~~~~~~T~~~ 308 (313)
T 2d9q_B 295 SDWSPSLELRTTER 308 (313)
T ss_dssp CCCCCCEEECCCC-
T ss_pred CCCCCccceeCCcc
Confidence 3777888888653
No 135
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=94.50 E-value=0.51 Score=46.25 Aligned_cols=105 Identities=13% Similarity=0.143 Sum_probs=57.9
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+.+ ...+.++++|.|....+ ....-.|+|...++.... ...... +.+-....+
T Consensus 104 ~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~--------------~~~~~~~~~ 163 (283)
T 1tdq_A 104 EIDAPKNLRV-GSRTATSLDLEWDNSEA-EAQEYKVVYSTLAGEQYH----EVLVPK--------------GIGPTTKTT 163 (283)
T ss_dssp CCCCCEEEEE-EEECSSCEEEEEECCSS-CCSEEEEEEEETTCCCCE----EEEEEC--------------CSSSEEEEE
T ss_pred CCCCCCceEE-EecCCCeEEEEecCCCC-CccEEEEEEEeCCCCcce----EEECCC--------------CCcccceEE
Confidence 4566765555 23357899999987642 122346677654332110 111110 011256778
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcCCCCCCCCceEEEEEec
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSS--EYQFKASPYPGQDSLQQVIIFGD 294 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~--~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
+++|+|++.|.++|......| .|. ...+.|.|.+ ...+++...++
T Consensus 164 i~~L~p~t~Y~~~V~A~n~~g---~s~~~~~~~~t~~~~--P~~l~~~~~~~ 210 (283)
T 1tdq_A 164 LTDLVPGTEYGVGISAVMNSK---QSIPATMNARTELDS--PRDLMVTASSE 210 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTE---ECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EecCCCCCEEEEEEEEEeCCC---CCcceEEEecCCCCC--CCccEEeEecC
Confidence 999999999999998763222 343 3445555543 22355544443
No 136
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=94.48 E-value=0.18 Score=46.39 Aligned_cols=90 Identities=13% Similarity=0.108 Sum_probs=51.1
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++ ...+.++++|+|.-..+ .-..-.|+|...++... .... ++-.....
T Consensus 6 ~p~~P~~l~~-~~~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~-----~~~~-----------------~~~~~~~~ 61 (186)
T 1qr4_A 6 DLDNPKDLEV-SDPTETTLSLRWRRPVA-KFDRYRLTYVSPSGKKN-----EMEI-----------------PVDSTSFI 61 (186)
T ss_dssp --CCCEEEEE-ESCCSSEEEEEEECCSS-CCSEEEEEEECTTCCEE-----EEEE-----------------CTTCSEEE
T ss_pred CCcCCCceEE-EecCCCEEEEEEeCCCC-CccEEEEEEEeCCCCee-----EEEC-----------------CCCCCEEE
Confidence 3556766665 33457899999987532 12234566663322110 0110 11123457
Q ss_pred ecCCCCCCEEEEEEeeecCCCCcccc--ceEEEEcCCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWS--SEYQFKASPYP 281 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S--~~~~F~T~p~~ 281 (612)
++||+|++.|.++|.... + .+.| ....++|.|.+
T Consensus 62 i~~L~p~t~Y~~~V~a~~--~-~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 62 LRGLDAGTEYTISLVAEK--G-RHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp EESCCSSCEEEEEEEEES--S-SCBCCCEEEEEECCCCC
T ss_pred ECCCCCCCEEEEEEEEEc--C-CccCCCEEEEEECCCCC
Confidence 899999999999998763 2 2234 34667777654
No 137
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.47 E-value=0.17 Score=43.04 Aligned_cols=88 Identities=15% Similarity=0.074 Sum_probs=49.2
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++ ...+.+++.|.|......+. ..-.|+|...+.... ...... .+-...
T Consensus 17 ~P~~P~~l~~-~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~ 75 (119)
T 1wfn_A 17 VPGPVGHLSF-SEILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT---RVTHYL-----------------PNVTLE 75 (119)
T ss_dssp SCCCCSCCEE-ESCCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGG---CCCEEE-----------------CSSCCE
T ss_pred CCCCCCceEE-EECCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCc---eEEEEe-----------------CCCceE
Confidence 3455655554 33357899999976532110 113455554332110 000000 123446
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceE
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEY 273 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~ 273 (612)
++|++|+|++.|.+||......|...||...
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 76 YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 7889999999999999876544555566554
No 138
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=94.46 E-value=0.038 Score=60.21 Aligned_cols=67 Identities=19% Similarity=0.261 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc--CCCCEEEEcCccccCCCcccHHHHHHHhhhccc--cCCCeE
Q 007227 288 QVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~--~~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--~~vP~~ 363 (612)
+++++||+|.. ...+.++++.. ...+-++++||++ +.|..+ .+-+..+..+. ..-.++
T Consensus 84 pI~VIGDIHGq---------------~~dL~~LL~~~g~p~~d~yVFLGDyV-DRGp~S--~Evl~lL~aLk~~~P~~v~ 145 (521)
T 1aui_A 84 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYV-DRGYFS--IECVLYLWALKILYPKTLF 145 (521)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCS-SSSSCH--HHHHHHHHHHHHHSTTTEE
T ss_pred ceeeccCCCCC---------------HHHHHHHHHhcCCCCcceEEEcCCcC-CCCCCH--HHHHHHHHHHhhhCCCeEE
Confidence 58999999843 33455555532 3458899999999 556533 12222222211 123488
Q ss_pred EccCCCccC
Q 007227 364 IASGNHERD 372 (612)
Q Consensus 364 ~~~GNHD~~ 372 (612)
.+.||||..
T Consensus 146 lLRGNHE~~ 154 (521)
T 1aui_A 146 LLRGNHECR 154 (521)
T ss_dssp ECCCTTSSH
T ss_pred EecCCccHH
Confidence 999999964
No 139
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=94.43 E-value=0.047 Score=59.22 Aligned_cols=68 Identities=16% Similarity=0.243 Sum_probs=42.3
Q ss_pred eEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhcC---CCCEEEEcCccccCCCcccHHHHHHHhhhc--cccCCC
Q 007227 287 QQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEP--IASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~~---~pdfvl~~GDi~Y~~g~~~~wd~f~~~i~~--l~~~vP 361 (612)
.|++++||+|.. ...+.++++... ..+.++++||++ +.|..+ .+....+.. +...-.
T Consensus 213 ~~~~vigDiHG~---------------~~~l~~~l~~~~~~~~~~~~v~lGD~v-drG~~s--~e~~~~l~~l~~~~~~~ 274 (477)
T 1wao_1 213 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFV-DRGSFS--VEVILTLFGFKLLYPDH 274 (477)
T ss_dssp CEEEEECBCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCS-SSSTTH--HHHHHHHHHHHHHSTTT
T ss_pred cceEEEeCCCCC---------------HHHHHHHHHHcCCCCCcCeEEEecccc-CCCcch--HHHHHHHHHHHhhCCCc
Confidence 689999999843 344566665532 235699999999 555432 122222211 122457
Q ss_pred eEEccCCCccC
Q 007227 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~~~GNHD~~ 372 (612)
++.++||||..
T Consensus 275 ~~~lrGNHE~~ 285 (477)
T 1wao_1 275 FHLLRGNHETD 285 (477)
T ss_dssp EEEECCTTSSH
T ss_pred eEeecCCccHH
Confidence 89999999953
No 140
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=94.43 E-value=0.11 Score=42.72 Aligned_cols=88 Identities=17% Similarity=0.101 Sum_probs=49.0
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|..+.+. ..+.++++|+|..... .-..-.|+|....+.... ..... ++-...++|+|
T Consensus 4 ~P~~l~v~-~~~~~sv~l~W~~p~~-~i~~Y~v~y~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~ 61 (98)
T 3teu_A 4 APTDLQVT-NVTDTSITVSWTPPSA-TITGYRITYTPSNGPGEP---KELTV-----------------PPSSTSVTITG 61 (98)
T ss_dssp CCEEEEEE-EECSSCEEEEEECCSS-CCSEEEEEEEETTSCSCC---EEEEE-----------------CTTCSEEEECS
T ss_pred CCCceEEE-EecCCEEEEEEeCCCC-cccEEEEEEEECCCCCce---EEEEc-----------------CCCcCEEEecC
Confidence 45555542 3356899999987632 112236777643221100 00111 11234568999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 248 LWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
|+|++.|.+||..... .+.|+...+...+.
T Consensus 62 L~p~t~Y~~~V~A~n~---~G~s~p~~~~~~~~ 91 (98)
T 3teu_A 62 LTPGVEYVVSVYALKD---NQESPPLVGTQTTG 91 (98)
T ss_dssp CCTTCEEEEEEEEEET---TEECCCEEEEEECS
T ss_pred CCCCCEEEEEEEEEeC---CCCCCCeEEEeccC
Confidence 9999999999987632 23455555554443
No 141
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.38 E-value=0.12 Score=43.71 Aligned_cols=91 Identities=12% Similarity=0.085 Sum_probs=53.4
Q ss_pred ccCCCCCCcceeeecC-CCCcEEEEEEeCCC-----CCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccC
Q 007227 163 FTNPNAPVYPRLAQGK-VWNEMTVTWTSGYG-----INEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (612)
Q Consensus 163 ~~~~~~P~~~~La~~~-~~~~m~V~W~T~~~-----~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 236 (612)
..-|.+|....+..-. ..+++.|+|..... ...-.-.|+|...+...+.. .. .
T Consensus 5 ivkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~----~~-~---------------- 63 (109)
T 1uc6_A 5 SVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQH----VE-L---------------- 63 (109)
T ss_dssp SCCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCC----EE-E----------------
T ss_pred EEecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEE----Ee-c----------------
Confidence 3456778777775533 46899999987642 00123467777654322211 00 0
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccc---cceEEEE
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIW---SSEYQFK 276 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~---S~~~~F~ 276 (612)
.-...+.|.+|+||+.|..||..... |...| |....++
T Consensus 64 -~~~~~~~l~~L~p~t~Y~~~VRa~~~-g~g~wS~WS~~~~~~ 104 (109)
T 1uc6_A 64 -SNGTAHTITDAYAGKEYIIQVAAKDN-EIGTWSDWSVAAHAT 104 (109)
T ss_dssp -SSCSEEEETTCCSSSCEEEEEECCBS-SSCCCCCCCEEEEEC
T ss_pred -ccCCEEEEeCCCCCCEEEEEEEEEeC-CCCCcCcCCCCeeee
Confidence 00124578999999999999997642 44344 4444444
No 142
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=94.36 E-value=0.12 Score=47.43 Aligned_cols=108 Identities=11% Similarity=0.006 Sum_probs=56.4
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++. ..+.++++|.|....... ...-.|+|...+...+.... .. .-..
T Consensus 5 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~-----------------~~~~ 62 (197)
T 3lpw_A 5 TPGPPQDLKVK-EVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA----TN-----------------CHKT 62 (197)
T ss_dssp SCCCCEEEEEE-EECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEE----EE-----------------ECSS
T ss_pred CCCCCCCcEEE-EecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEee----cC-----------------CCcc
Confidence 45667665553 235789999998763211 11235666554332211100 00 0123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC-CCCCCCceEEEEEec
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP-YPGQDSLQQVIIFGD 294 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p-~~g~~~~~rf~v~GD 294 (612)
..++++|+|++.|.|||......|...++....+.+.. .|.....+++...++
T Consensus 63 ~~~~~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~ 116 (197)
T 3lpw_A 63 SWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTR 116 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEESCCCCCCCSCEEEEEECS
T ss_pred EEEEcCCCCCCEEEEEEEEEcCccccCCCCCccceecCCCCCCCcccEEEeccC
Confidence 45789999999999999876444433344433344332 222222355554443
No 143
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=94.31 E-value=0.13 Score=43.61 Aligned_cols=89 Identities=13% Similarity=0.055 Sum_probs=47.7
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCC-CCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
-|.+|.........+.+++.|+|.... .+..+.-|+... +..+...+... .+. .-
T Consensus 4 ~P~aP~~l~a~~~~~~~~v~LsW~~~~---~~~~Y~VyR~~~~~~~~~~i~~~~-------------------~~t--sy 59 (103)
T 3mpc_A 4 APAFPTGLSAVLDSSGNTANLTWNAAP---GANSYNVKRSTKSGGPYTTIATNI-------------------TST--NY 59 (103)
T ss_dssp CCCCCEEEEEEECTTSCCEEEEEECCT---TCSEEEEEEESSTTCCCEEEEEEE-------------------CSS--EE
T ss_pred CCCCCceeEEEEeCCCCEEEEEEECCC---CCCEEEEEEecCCCCCcEEEeecC-------------------CCC--EE
Confidence 356676655533334578999998753 245565565432 11111100000 011 12
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
+.++|+||++|+|+|..-...|....|...+.++
T Consensus 60 ~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~ 93 (103)
T 3mpc_A 60 TDTGVATGTKYYYVVSAVSNGVETLNSAEAILQY 93 (103)
T ss_dssp EETTCCTTCCCEEEEEEEETTEECCCCCCEECBC
T ss_pred EECCCCCCCEEEEEEEEEeCcCCcCCCccEEEEC
Confidence 3589999999999998754333334455544443
No 144
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.28 E-value=0.18 Score=41.18 Aligned_cols=73 Identities=16% Similarity=0.138 Sum_probs=41.6
Q ss_pred CCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecC
Q 007227 168 APVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRE 247 (612)
Q Consensus 168 ~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~g 247 (612)
+|...++. ..+.++++|+|.-... .-..-.|+|...++... .. +. ...+-...++|+|
T Consensus 4 ~P~~l~~~-~~~~~si~lsW~~p~~-~i~~Y~v~y~~~~~~~~------~~------~~--------~~~~~~~~~~l~~ 61 (94)
T 1j8k_A 4 RPKGLAFT-DVDVDSIKIAWESPQG-QVSRYRVTYSSPEDGIH------EL------FP--------APDGEEDTAELQG 61 (94)
T ss_dssp CCCCCEEE-EEETTEEEEECCCCSS-CCSCEEEEEEETTTEEE------EE------CC--------CCCSSCCEEEECS
T ss_pred CCCccEEE-eecCCEEEEEEcCCCC-CcceEEEEEEeCCCCCc------eE------Ee--------cCCCCccEEEeCC
Confidence 45555552 3346899999965531 11223566764332100 00 00 0012234678999
Q ss_pred CCCCCEEEEEEeeec
Q 007227 248 LWPNAMYTYKLGHRL 262 (612)
Q Consensus 248 L~Pgt~Y~Yrv~~~~ 262 (612)
|+||+.|.++|....
T Consensus 62 L~p~t~Y~~~V~A~~ 76 (94)
T 1j8k_A 62 LRPGSEYTVSVVALH 76 (94)
T ss_dssp CCCCSEEEEEEEECS
T ss_pred CCCCCEEEEEEEEEc
Confidence 999999999998763
No 145
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=94.26 E-value=0.055 Score=46.62 Aligned_cols=76 Identities=12% Similarity=0.094 Sum_probs=44.4
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC---CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN---EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+. ..+.++++|.|....... -..-.|+|...+...+..... .....
T Consensus 17 ~P~~P~~l~~~-~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~---------------------~~~~~ 74 (120)
T 2yux_A 17 RPGPPQIVKIE-DVWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE---------------------HYHRT 74 (120)
T ss_dssp CCCCCSCEEEE-EEETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES---------------------SCCSS
T ss_pred CCCcCCCCEEE-EecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee---------------------cCCcC
Confidence 45677776653 335689999998754211 112356776544332211100 00112
Q ss_pred EEEecCCCCCCEEEEEEeeec
Q 007227 242 TGFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
..++++|+|++.|.|||....
T Consensus 75 ~~~v~~L~p~t~Y~frV~A~n 95 (120)
T 2yux_A 75 SATITELVIGNEYYFRVFSEN 95 (120)
T ss_dssp CCEECCCCSSEEEEEEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEee
Confidence 347899999999999998753
No 146
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=94.26 E-value=0.2 Score=48.78 Aligned_cols=93 Identities=11% Similarity=0.084 Sum_probs=54.8
Q ss_pred cCCCCCCcceeeecC-CC----CcEEEEEEeCCCCC------CCccEEEEccCCCCCccccCcceEEeccccCCCCCccc
Q 007227 164 TNPNAPVYPRLAQGK-VW----NEMTVTWTSGYGIN------EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTV 232 (612)
Q Consensus 164 ~~~~~P~~~~La~~~-~~----~~m~V~W~T~~~~~------~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~ 232 (612)
..|.+|..+.+.+.. +. .++.|.|....... .-.-.|+|..+++..+....
T Consensus 129 v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------------ 190 (236)
T 1axi_B 129 VQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------------ 190 (236)
T ss_dssp BCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC------------------
T ss_pred cccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe------------------
Confidence 356778776543332 12 45999998874210 01234556554332221100
Q ss_pred cccCCCeEEEEEecCCCCCCEEEEEEeeecCCC--CccccceEEEEcC
Q 007227 233 GWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNG--TYIWSSEYQFKAS 278 (612)
Q Consensus 233 g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g--~~~~S~~~~F~T~ 278 (612)
..-...+.|.+|+||++|..||......| -..||+...|+|+
T Consensus 191 ----~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 191 ----PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp ----CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ----ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 01124567899999999999999875444 3357778888775
No 147
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=94.20 E-value=0.11 Score=48.74 Aligned_cols=94 Identities=13% Similarity=0.046 Sum_probs=53.7
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+.. +.++++|+|.-...... ..-.|+|..... ..+.... .... +...
T Consensus 5 ~P~~P~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~--~~~~-----------------~~~~ 63 (205)
T 1cfb_A 5 VPNAPKLTGITC--QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY--EKVP-----------------NTDS 63 (205)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE--EEEE-----------------TTCS
T ss_pred CCCCCCCcEEEe--cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeee--eccC-----------------CCce
Confidence 466777777755 78999999987632111 123566754322 1111100 0000 1111
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcccc-ceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWS-SEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S-~~~~F~T~p~ 280 (612)
...+ +|+|++.|.+||......|...+| ....++|.+.
T Consensus 64 ~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 64 SFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 2345 999999999999876444444566 4567887653
No 148
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=94.04 E-value=0.22 Score=49.26 Aligned_cols=106 Identities=10% Similarity=-0.048 Sum_probs=58.1
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+.+ ...+.++++|+|....+ ....-.|+|...+..... ..... ++-...+.+
T Consensus 21 p~~P~~l~~-~~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i 78 (290)
T 3r8q_A 21 IPAPTDLKF-TQVTPTSLSAQWTPPNV-QLTGYRVRVTPKEKTGPM---KEINL-----------------APDSSSVVV 78 (290)
T ss_dssp CCCCEEEEE-EEECSSCEEEEEECCSS-CCCEEEEEEEESSSSSCC---EEEEE-----------------CTTCCEEEE
T ss_pred CCCCCceEE-EECCCCEEEEEEeCCCC-CeeEEEEEEEeCCCCCce---EEEEc-----------------CCCccEEEe
Confidence 445555554 23457899999997632 122346777654321110 00111 112346678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEec
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGD 294 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
++|+|++.|.++|......|...++ ...|+|.+.+.....+++...++
T Consensus 79 ~~L~p~t~Y~~~V~a~~~~g~s~~s-~~~~~t~~~~~~P~~l~~~~~~~ 126 (290)
T 3r8q_A 79 SGLMVATKYEVSVYALKDTLTSRPA-QGVVTTLENVSPPRRARVTDATE 126 (290)
T ss_dssp CSCCSSCEEEEEEEEEETTEECCCE-EEEEECCCCCCCCEEEEEEEECS
T ss_pred CCCCCCCEEEEEEEEEeCCCCCCCc-ceeEecCCCCCCCceeEEEEcCC
Confidence 9999999999999876433333333 35677765443333344443333
No 149
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.98 E-value=0.097 Score=44.90 Aligned_cols=92 Identities=10% Similarity=-0.037 Sum_probs=52.9
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.+|..+.+.. ..++++|+|.-+..... ..-.|+|+.. +..+..... .+ ++-....+
T Consensus 9 ~pP~~l~v~~--~~~sv~L~W~pP~~~~~~I~gY~vey~~~-~~~W~~~~~--~~-----------------~~~~t~~~ 66 (108)
T 1v5j_A 9 SPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQG-SQGWEVLDP--AV-----------------AGTETELL 66 (108)
T ss_dssp CCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEET-TCCCEEEEE--EE-----------------CSSCCEEE
T ss_pred CCCcceEEEE--eCCEEEEEECCCCCCCCCCcEEEEEEEeC-CCCcEEeee--ec-----------------CCCcCEEE
Confidence 4455555533 45789999998753111 1236778762 222221110 01 11233456
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
+.+|+|+++|.+||..-...|....|+...++|...
T Consensus 67 v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 67 VPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp CCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred eCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 999999999999998764444444566666666544
No 150
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=93.96 E-value=0.29 Score=47.02 Aligned_cols=95 Identities=17% Similarity=0.203 Sum_probs=56.7
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC----CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN----EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
+.+|.-+++... +.+.+.|+|....... .-.-.|+|..++. .+... ...+. ....+
T Consensus 106 ~~pP~~l~~~~~-~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~~-~~~~~-----------------~~~~~ 165 (214)
T 2b5i_B 106 LMAPISLQVVHV-ETHRCNISWEISQASHYFERHLEFEARTLSPGH-TWEEA-PLLTL-----------------KQKQE 165 (214)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTTS-CCEEE-----------------CSCCC
T ss_pred CCCCceEEEEEe-cCCeEEEEECCCCccccCCCceEEEEEEecCCC-Chhee-eeeee-----------------cccce
Confidence 366777776543 3468999998864210 0123566665432 12111 11111 11234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCC-C---ccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNG-T---YIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g-~---~~~S~~~~F~T~p~ 280 (612)
.+.|.+|+||+.|..||......| . ..||+...|+|.|.
T Consensus 166 ~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 166 WICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred EEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 677899999999999999874322 2 35788899999875
No 151
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=93.72 E-value=0.27 Score=46.66 Aligned_cols=88 Identities=13% Similarity=0.088 Sum_probs=48.7
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCC-CCccEEEEccCCC-CCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGIN-EAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~-~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
.-|.+|..+.+......+++.|.|....... .-.-.|+|...+. ..+... .. ...-..
T Consensus 108 vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~yev~y~~~~~~~~w~~~------~~--------------~~~~~~ 167 (206)
T 3v6o_A 108 VKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQIRYGLSGKEVQWKMY------EV--------------YDAKSK 167 (206)
T ss_dssp BCCCCCCSCEEEEETTTTEEEEEC--------CEEEEEEEEESSSSCCCEEE------EE--------------CC---C
T ss_pred EcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEEEEEEECCCCCceEEE------ec--------------ccCcce
Confidence 3677888777765545789999998764211 0123456655431 111110 00 001123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSS 271 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~ 271 (612)
.+.|.+|+||+.|..||......|...||+
T Consensus 168 ~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSe 197 (206)
T 3v6o_A 168 SVSLPVPDLCAVYAVQVRCKRLDGLGYWSN 197 (206)
T ss_dssp EEEECCSCTTSCEEEEEEEEETTSCSCCCC
T ss_pred eEEeecCCCCCEEEEEEEEecCCCCCcCCC
Confidence 578999999999999999875445555665
No 152
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=93.60 E-value=0.19 Score=50.25 Aligned_cols=97 Identities=14% Similarity=0.145 Sum_probs=57.5
Q ss_pred CCCCCCcceeee-cCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQ-GKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~-~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+.. ..+.++++|+|....... ...-.|+|...+...+...... + ..+-..
T Consensus 199 ~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~------~------------~~~~~~ 260 (303)
T 1i1r_A 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------D------------TASTRS 260 (303)
T ss_dssp ECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG------G------------GCSCCS
T ss_pred ecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc------c------------CCCcee
Confidence 466777666643 235789999998764210 0123566665543222211000 0 012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~---~~S~~~~F~T~p 279 (612)
..+|++|+|+|.|.+||......|.. .||+...|+|+.
T Consensus 261 ~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 261 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 56789999999999999976434433 466788899864
No 153
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=93.54 E-value=0.13 Score=48.50 Aligned_cols=89 Identities=16% Similarity=0.165 Sum_probs=50.5
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
.+|...++ ...+.++++|+|..... .-..-.|+|...+.... ....+. ++-...++|+
T Consensus 105 ~~P~~l~v-~~~t~~si~l~W~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l~ 162 (195)
T 2qbw_A 105 SVPTNLEV-VAATPTSLLISWDASYY-GVSYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATIS 162 (195)
T ss_dssp CSSCCCEE-EEEETTEEEEECCCCCS-SCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCSEEEEC
T ss_pred CCCcccEE-EeCCCCEEEEEEeCCCC-CccEEEEEEEECCCCCc---ceEEEe-----------------CCCCCEEEeC
Confidence 34555554 33357899999976532 11223566765432110 000111 1123467899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 247 ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
||+|+|+|.++|......|....|+...|++
T Consensus 163 gL~p~t~Y~~~V~A~~~~G~g~~S~~v~~~~ 193 (195)
T 2qbw_A 163 GLKPGVDYTITVYAYSDYYGSHHYSPISINY 193 (195)
T ss_dssp SCCTTCEEEEEEEEESSTTSSCBCCCEEEEE
T ss_pred CCCCCCEEEEEEEEEeCCccCCCCCCEEEEe
Confidence 9999999999999875445444565555543
No 154
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=93.53 E-value=0.23 Score=48.34 Aligned_cols=96 Identities=20% Similarity=0.182 Sum_probs=58.2
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCC----CCccEEEEccCC-CCCccccCcceEEeccccCCCCCccccccCCC
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGIN----EAEPFVEWGPKG-GDRTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~----~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 238 (612)
.-|.+|..+.+......+++.|+|....... .-.-.|+|.... ...+.. . .. ..
T Consensus 111 VKPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~----v--~~---------------~~ 169 (223)
T 3up1_A 111 VKPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTH----V--NL---------------SS 169 (223)
T ss_dssp BCCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEE----E--EE---------------SS
T ss_pred EEcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEE----E--Ee---------------cC
Confidence 3577888777766555677999998864211 112356666543 122211 0 00 11
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecC-CCC---ccccceEEEEcCCC
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLF-NGT---YIWSSEYQFKASPY 280 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~-~g~---~~~S~~~~F~T~p~ 280 (612)
....+.+.+|+||+.|..||..... .+. ..||....|+|++.
T Consensus 170 t~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 170 TKLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp SEEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred ceeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 2234567899999999999997742 222 24677899999765
No 155
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=93.49 E-value=0.22 Score=50.89 Aligned_cols=93 Identities=14% Similarity=0.037 Sum_probs=50.6
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+.+....+.++++|.|....+.....-.|+|...++..... ..... .+.....++
T Consensus 2 p~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 62 (368)
T 1fnf_A 2 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 62 (368)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCC--EEEEE-----------------CTTCCEEEC
T ss_pred CCCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCce--eEEEe-----------------cCCcCEEEE
Confidence 45676666643333346999998864211223466676543321100 00001 112345689
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
++|+|++.|.|||...... +.|...+..+.+.
T Consensus 63 ~~L~p~t~Y~~~V~a~~~~---g~s~~~~~~~~~~ 94 (368)
T 1fnf_A 63 DNLSPGLEYNVSVYTVKDD---KESVPISDTIIPA 94 (368)
T ss_dssp CCCCTTSCEEEEEEEEETT---EECCCEEEEECCC
T ss_pred CCCCCCCEEEEEEEEEcCC---CccCceeeeecCC
Confidence 9999999999999876322 2344444444443
No 156
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=93.01 E-value=2.4 Score=47.75 Aligned_cols=42 Identities=19% Similarity=0.297 Sum_probs=31.3
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccce---EEEEcCCC
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSE---YQFKASPY 280 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~---~~F~T~p~ 280 (612)
-...++|+||+|++.|.+||......|...+|.. ..++|.+.
T Consensus 332 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 332 FQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 3467889999999999999987644454455655 77888654
No 157
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=92.96 E-value=0.8 Score=37.89 Aligned_cols=83 Identities=19% Similarity=0.380 Sum_probs=51.0
Q ss_pred CCcceeeecC-CCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccC---CCeEEEEE
Q 007227 169 PVYPRLAQGK-VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD---PGYIHTGF 244 (612)
Q Consensus 169 P~~~~La~~~-~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~---~g~~h~a~ 244 (612)
|.|.-++-+. ..++-.|.|.......-..-.+.|+.+... .-|++ |+.+..-+
T Consensus 8 pa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~-----------------------g~Wke~~Ip~h~nSYt 64 (98)
T 1oww_A 8 PVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSV-----------------------GRWKEATIPGHLNSYT 64 (98)
T ss_dssp CCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCS-----------------------SCCEEEEECSSCCEEE
T ss_pred ceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCC-----------------------CceeEEEecCccceEE
Confidence 4444443332 378999999987421001234444443221 01332 56777788
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc--eEEEEc
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSS--EYQFKA 277 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~--~~~F~T 277 (612)
|+||+||..|.=++-+... .+|++ .+.|.|
T Consensus 65 I~GL~P~~~YE~qv~S~~r---yG~~Evs~f~FtT 96 (98)
T 1oww_A 65 IKGLKPGVVYEGQLISIQQ---YGHQEVTRFDFTT 96 (98)
T ss_dssp ECSCCSSEEEEEEEEEEES---SSCEEEEEEEEEE
T ss_pred EecCCCCcEEEEEEEEeec---cCcccceEEEEEe
Confidence 9999999999999998743 45665 466665
No 158
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=92.92 E-value=0.4 Score=44.64 Aligned_cols=89 Identities=19% Similarity=0.298 Sum_probs=49.8
Q ss_pred CCCcceeee-cCCCCcEEEEEEeCCCCCCCccEEEEccCCCC-CccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 168 APVYPRLAQ-GKVWNEMTVTWTSGYGINEAEPFVEWGPKGGD-RTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 168 ~P~~~~La~-~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+|..+.+.. +...++++|.|....+..-..-.|+|...... .+. .... ++-...++|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~----~~~~-----------------~~~~~~~~i 60 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGRWK----EATI-----------------PGHLNSYTI 60 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSCCE----EEEE-----------------CTTCCEEEE
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCceE----EEec-----------------CCCccEEEe
Confidence 355555432 12378999999986321122346677654321 111 0111 111236789
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
+||+|++.|.+||......|...++ ...|+|.
T Consensus 61 ~~L~p~t~Y~~~V~a~n~~G~~~~~-~~~~~t~ 92 (201)
T 2ha1_A 61 KGLKPGVVYEGQLISIQQYGHQEVT-RFDFTTT 92 (201)
T ss_dssp CSCCTTEEEEEEEEEECTTSCEEEE-EEEEEEC
T ss_pred cCCCCCCEEEEEEEEEecccccCce-eEEEecC
Confidence 9999999999999876433433322 4566654
No 159
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=92.91 E-value=0.27 Score=47.30 Aligned_cols=94 Identities=15% Similarity=0.129 Sum_probs=55.8
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC---CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE---AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++......+++.|+|........ -.-.|+|...++..+.. .... .+-..
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~---~~~~-----------------~~~~~ 180 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQ---RVEI-----------------LEGRT 180 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCC---EEEE-----------------CTTCC
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEE---EEEE-----------------ecCce
Confidence 4667877777654447899999988643100 12356665443321111 0000 01123
Q ss_pred EEEecCCCCCCEEEEEEeeecCC----CC-ccccceEEEEcC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFN----GT-YIWSSEYQFKAS 278 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~----g~-~~~S~~~~F~T~ 278 (612)
.+.|.+|+||+.|..||...... |. ..||+...|+|+
T Consensus 181 ~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 181 ECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp EEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred EEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 56789999999999999987321 11 357788889983
No 160
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=92.76 E-value=0.39 Score=39.96 Aligned_cols=75 Identities=16% Similarity=0.214 Sum_probs=43.0
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCC-CCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGI-NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~-~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
.+|...++ ...+.++++|.|...... .-..-.|+|...++... ...... ++-...++|
T Consensus 6 ~~P~~l~v-~~~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 64 (101)
T 3k2m_C 6 SVPTKLEV-VAATPTSLLISWDAPMSSSSVYYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATI 64 (101)
T ss_dssp BSSCEEEE-EEEETTEEEEEECCCCTTSCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCcceEE-eecCCCEEEEEecCCCCCCceeeEEEEEEECCCCCc---cEEEEc-----------------CCCccEEEE
Confidence 35666665 233578999999875410 11123567765432110 000111 112246789
Q ss_pred cCCCCCCEEEEEEeeec
Q 007227 246 RELWPNAMYTYKLGHRL 262 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~ 262 (612)
+||+||+.|..+|....
T Consensus 65 ~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 65 SGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CSCCTTCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998763
No 161
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=92.74 E-value=0.39 Score=44.98 Aligned_cols=94 Identities=16% Similarity=0.248 Sum_probs=49.3
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCC-CCccccCcceEEeccccCCCCCccccc-cCCCeEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGG-DRTYSPAGTLTFGRGSMCGAPARTVGW-RDPGYIH 241 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mc~~pa~~~g~-~~~g~~h 241 (612)
+.+|..+++. ..+.++++|+|.-..... ...-.|+|...+. ..+........+.. +. + ...+-..
T Consensus 2 ~~pP~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~------~~----~~~~~~~~~ 70 (214)
T 2ibg_A 2 TYPPTPPNVT-RLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK------PK----WNSELGKSF 70 (214)
T ss_dssp CCCCCCCEEE-EEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCS------SS----CSSSSEEEE
T ss_pred CCCCCCCEee-EecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccc------cc----cccccCcce
Confidence 4467777763 336789999998754211 0122455555432 22221111111100 00 0 0112456
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcccc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWS 270 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S 270 (612)
..++++|+|++.|.|||......|...+|
T Consensus 71 ~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s 99 (214)
T 2ibg_A 71 TASVTDLKPQHTYRFRILAVYSNNDNKES 99 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCEEEC
T ss_pred eEEecCCcCCCEEEEEEEEEecCCCCCCC
Confidence 67899999999999999875333433334
No 162
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=92.55 E-value=0.32 Score=42.22 Aligned_cols=74 Identities=18% Similarity=0.283 Sum_probs=43.6
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|...++. ..+.+++.|.|.-... .-..-.|+|...++... ...... ++-...++|
T Consensus 29 ~~~P~~l~v~-~~t~~Si~lsW~~p~~-~i~~Y~V~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 86 (121)
T 2ocf_D 29 SDVPTKLEVV-AATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTATI 86 (121)
T ss_dssp CCSCEEEEEE-EECSSCEEEEEECCSS-CCCEEEEEEEETTTCSC---BEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEEE-ecCCCEEEEEEcCCCC-CCcEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 3556666653 3457899999976532 11223566765433210 000110 112346789
Q ss_pred cCCCCCCEEEEEEeee
Q 007227 246 RELWPNAMYTYKLGHR 261 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (612)
+||+||+.|.++|...
T Consensus 87 ~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 87 SGLKPGVDYTITVYAV 102 (121)
T ss_dssp CCCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999875
No 163
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=92.46 E-value=0.54 Score=47.62 Aligned_cols=92 Identities=14% Similarity=0.130 Sum_probs=53.1
Q ss_pred CCCCCCcceeeecC-CCCcEEEEEEeCCCCCCC----ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCe
Q 007227 165 NPNAPVYPRLAQGK-VWNEMTVTWTSGYGINEA----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~P~~~~La~~~-~~~~m~V~W~T~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~ 239 (612)
-|.+|..+.+.... +.++++|+|.-....... .-.|+|...+...+... .. .+.
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~------~~---------------~~~ 254 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTW------MV---------------KDL 254 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEE------EC---------------GGG
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEE------cc---------------cCC
Confidence 36677666665433 357999999986431111 23566665543222210 00 011
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEc
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYI---WSSEYQFKA 277 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~---~S~~~~F~T 277 (612)
-...+|.+|+|++.|..||......|... ||+...++|
T Consensus 255 ~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 255 QHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp CSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred ceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 23567899999999999999774334433 455555544
No 164
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=92.36 E-value=0.45 Score=45.86 Aligned_cols=35 Identities=14% Similarity=0.358 Sum_probs=25.9
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
+++||+|+|.|.|||.....+|...-++...+||.
T Consensus 203 t~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 203 TFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 57999999999999987755554433355666663
No 165
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=92.36 E-value=0.4 Score=39.76 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=40.9
Q ss_pred CCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCC
Q 007227 169 PVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLREL 248 (612)
Q Consensus 169 P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL 248 (612)
|....+ ...+.++++|+|....+ .-..-.|+|...+.... ....... +-.-.++|+||
T Consensus 5 P~~l~v-~~~t~~Sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~~~-----------------~~~t~~~l~gL 62 (98)
T 3tes_A 5 PKNLVV-SEVTEDSLRLSWTAPDA-AFDSFMIQYQESEKVGE---AINLTVP-----------------GSERSYDLTGL 62 (98)
T ss_dssp CEEEEE-ESCCSSCEEEEEECCTT-SCSEEEEEEEETTBCSC---CEEEEEE-----------------TTCSEEEECSC
T ss_pred CCceEE-EecCCCeEEEEecCCcC-ccceEEEEEEECCCCCc---eEEEEcC-----------------CCcCEEEECCC
Confidence 444443 23367999999987642 11223577765432110 0001111 11235689999
Q ss_pred CCCCEEEEEEeee
Q 007227 249 WPNAMYTYKLGHR 261 (612)
Q Consensus 249 ~Pgt~Y~Yrv~~~ 261 (612)
+|++.|.++|...
T Consensus 63 ~P~t~Y~~~V~A~ 75 (98)
T 3tes_A 63 KPGTEYTVSIYGV 75 (98)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCCEEEEEEEEE
Confidence 9999999999876
No 166
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=92.21 E-value=0.63 Score=45.54 Aligned_cols=105 Identities=14% Similarity=0.073 Sum_probs=57.6
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+.+ ...+.++++|.|.-... ....-.|+|+........ ..... ++......
T Consensus 14 ~p~~P~~l~~-~~~~~~sv~l~W~~~~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~ 71 (283)
T 1tdq_A 14 VIDGPTQILV-RDVSDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGK---TTFRL-----------------QPPLSQYS 71 (283)
T ss_dssp SSCCCEEEEE-EEECSSCEEEEEECCSS-CCSEEEEEEEESSSSCCC---EEEEE-----------------CTTCSEEE
T ss_pred CCCCCcEEEE-EecCCCeEEEEEECCCC-ceeEEEEEEEEecCCCCc---EEEEe-----------------CCCCCEEE
Confidence 3456666655 23356899999987641 112346777543221100 00111 11234567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCceEEEEEec
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPGQDSLQQVIIFGD 294 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
|++|+|++.|.++|......|... .....|+|+|.+- ..+++...++
T Consensus 72 i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~~~~t~p~~P--~~l~~~~~~~ 118 (283)
T 1tdq_A 72 VQALRPGSRYEVSISAVRGTNESD-ASSTQFTTEIDAP--KNLRVGSRTA 118 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCC--EEEEEEEECS
T ss_pred ecCCCCCCEEEEEEEEECCCCCCC-CeeEEEECCCCCC--CceEEEecCC
Confidence 899999999999998763222211 2345677876542 2355544443
No 167
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=92.20 E-value=0.53 Score=40.81 Aligned_cols=40 Identities=20% Similarity=0.025 Sum_probs=26.4
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
....+|++|+|++.|.+||......|...++.. .++|.+.
T Consensus 80 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~-~~~T~~~ 119 (126)
T 1x5i_A 80 QRYYTIENLDPSSHYVITLKAFNNVGEGIPLYE-SAVTRPH 119 (126)
T ss_dssp CCEEEECSCCSSCEECCEEEEECSSCBCCCCCC-CEECCCC
T ss_pred eeEEEEeCCCCCCEEEEEEEEEeCCccCcceee-EEecccC
Confidence 345688999999999999987643444333432 3555443
No 168
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=91.92 E-value=0.42 Score=41.00 Aligned_cols=74 Identities=23% Similarity=0.404 Sum_probs=43.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|....+. ..+.++++|.|....+ .-..-.|+|...++... ...... ++-...++|
T Consensus 4 P~~P~~L~v~-~~t~~Sv~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~~l 61 (114)
T 3qwq_B 4 SDVPRDLEVV-AATPTSLLISWDSGRG-SYQYYRITYGETGGNSP---VQEFTV-----------------PGPVHTATI 61 (114)
T ss_dssp -CCCEEEEEE-EEETTEEEEEEECCSC-CCSEEEEEEEESSCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEE-ecCCCEEEEEEcCCcC-cccEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 4556555552 3357899999987632 11234677775433210 001111 112345789
Q ss_pred cCCCCCCEEEEEEeee
Q 007227 246 RELWPNAMYTYKLGHR 261 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (612)
+||+|+|.|..+|...
T Consensus 62 ~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 62 SGLKPGVDYTITVYAV 77 (114)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999865
No 169
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=91.56 E-value=0.7 Score=44.39 Aligned_cols=98 Identities=12% Similarity=0.191 Sum_probs=56.8
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCC-------CCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCC
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGI-------NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~-------~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~ 237 (612)
-|.+|..+.+. ..+.+.|+|...... ..-.-.|+|...+. .+.......... ..
T Consensus 100 kp~PP~nltv~---~~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~~~~~~~---------------~~ 160 (219)
T 3tgx_A 100 KPAPPFDVTVT---FSGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSPRRKLIS---------------VD 160 (219)
T ss_dssp CCCCCEEEEEE---ESSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCCEEEEEC---------------SS
T ss_pred EeCCCCceEEE---eCCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-CceecccceeEe---------------cC
Confidence 56678755554 246899999986421 01123566665542 221110000000 01
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCC---c---cccceEEEEcCCCC
Q 007227 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGT---Y---IWSSEYQFKASPYP 281 (612)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~---~---~~S~~~~F~T~p~~ 281 (612)
+....+.+.+|+||+.|..||......|. . .||+...|.|++..
T Consensus 161 ~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~~ 210 (219)
T 3tgx_A 161 SRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSEE 210 (219)
T ss_dssp CSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC--
T ss_pred CCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCchh
Confidence 23456678999999999999998754332 2 36788999998753
No 170
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=91.47 E-value=0.49 Score=39.55 Aligned_cols=75 Identities=23% Similarity=0.396 Sum_probs=44.2
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCC--CCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGI--NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
+.+|...++. ..+.++++|.|...... .-..-.|+|...+.... ...... ++-...+
T Consensus 8 ~~~P~~l~v~-~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~ 66 (103)
T 3t04_D 8 SSVPTKLEVV-DATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSP---VQEFTV-----------------PGYYSTA 66 (103)
T ss_dssp CCCCCSCEEE-EEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEE
T ss_pred CCCCceeEEE-ecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCc---cEEEEc-----------------CCCcCEE
Confidence 4567666662 34578999999765421 01123577765432110 000111 1123467
Q ss_pred EecCCCCCCEEEEEEeee
Q 007227 244 FLRELWPNAMYTYKLGHR 261 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~ 261 (612)
+|+||+|++.|..+|...
T Consensus 67 ~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 67 TISGLKPGVDYTITVYAY 84 (103)
T ss_dssp EECSCCTTCCEEEEEEEE
T ss_pred EeCCCCCCCEEEEEEEEE
Confidence 899999999999999876
No 171
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=91.40 E-value=0.23 Score=40.92 Aligned_cols=74 Identities=18% Similarity=0.316 Sum_probs=44.0
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|...++. ..+.++++|.|..... .-..-.|+|...++... ...... ++-...++|
T Consensus 5 ~~~P~~l~v~-~~t~~Si~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 62 (97)
T 3qht_C 5 SSVPTKLEVV-AATPTSLLISWDASSS-SVSYYRITYGETGGNSP---VQEFTV-----------------PGSSSTATI 62 (97)
T ss_dssp CCSSSSCEEE-EEETTEEEEECCCCCS-SCCEEEEEEEESSSCSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEE-ecCCCEEEEEEeCCCC-CCCEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 4567666662 3457899999986532 11223567765433210 000111 122346789
Q ss_pred cCCCCCCEEEEEEeee
Q 007227 246 RELWPNAMYTYKLGHR 261 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~ 261 (612)
+||+|++.|..+|...
T Consensus 63 ~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 63 SGLSPGVDYTITVYAY 78 (97)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999865
No 172
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.29 E-value=0.11 Score=43.64 Aligned_cols=76 Identities=18% Similarity=0.291 Sum_probs=43.5
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|...++. ..+.+++.|.|..... .-..-.|+|........ ..... .++-...++
T Consensus 7 ~p~~P~~l~v~-~~t~~si~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~~-----------------v~~~~~~~~ 64 (105)
T 2ekj_A 7 GRSPPSNLALA-SETPDSLQVSWTPPLG-RVLHYWLTYAPASGLGP---EKSVS-----------------VPGARSHVT 64 (105)
T ss_dssp TCCCCEEEEEE-EEETTEEEEEEECCSS-CCSBBCBBCCCTTSCSC---CCCBC-----------------CBTTSSEEE
T ss_pred CCCCCCceEEE-eCCCCEEEEEEeCCCC-cceEEEEEEEECCCCCc---cEEEE-----------------eCCCcCEEE
Confidence 45567666652 3357899999987632 11223455544322100 00000 012234568
Q ss_pred ecCCCCCCEEEEEEeeec
Q 007227 245 LRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~ 262 (612)
|+||+|+|.|.++|....
T Consensus 65 l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 65 LPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp ECSCCSSCCCBCBBCBBC
T ss_pred eCCCCCCCEEEEEEEEEe
Confidence 999999999999998653
No 173
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=91.22 E-value=0.58 Score=50.99 Aligned_cols=132 Identities=17% Similarity=0.155 Sum_probs=73.2
Q ss_pred cceEEEEEEeecccceEEEEEec-CCCCcEEEEeccceec-----cCCCCCCcceeeecCCCCcEEEEEEeCCCCCC--C
Q 007227 125 GKGSLKLQLINQRSDFSFVLFTN-GLLNPKVVAVSNKVTF-----TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--A 196 (612)
Q Consensus 125 g~~~~~~~l~n~r~~~~f~~~~~-~~~~p~~~a~s~~~~~-----~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~ 196 (612)
+..+.+|.+...-..|.|.+..- ++.. ..| .+.| .-|.+|..+++. ..+.+++.|+|........ -
T Consensus 345 ~~~~ct~~l~~~~t~Y~f~V~A~N~~G~----~~S-~~~~~~~~~v~P~PP~nl~v~-~~s~~sl~LsW~pP~~~~g~~l 418 (488)
T 2q7n_A 345 ETYRLGVQMHPGQEIHNFTLTGRNPLGQ----AQS-AVVINVTERVAPHDPTSLKVK-DINSTVVTFSWYLPGNFTKINL 418 (488)
T ss_dssp SCEEEEEECCSSCCCCEEEEEEEETTEE----EEE-EEECCGGGTBCCCCCEEEEEE-ECSTTCEEEEEEEEEECSSSEE
T ss_pred ceEEEEEcCCCCccEEEEEEEEEeCCCC----ccc-eEEEEecCCCCCCCCeEEEEE-ecCCCEEEEEEeCCCCCCCcce
Confidence 34556666554335677776553 2221 112 1222 245667666652 3457899999987632110 1
Q ss_pred ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCC---ccccceE
Q 007227 197 EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGT---YIWSSEY 273 (612)
Q Consensus 197 ~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~---~~~S~~~ 273 (612)
.-.|+|...+...+.. ..+.. + ...-.+.+.|.+|+|+|.|..||.... .|. ..||+..
T Consensus 419 ~YeV~Yr~~~~~~w~~---~~~~~------------~--~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v 480 (488)
T 2q7n_A 419 LCQIEICKANSKKEVR---NATIR------------G--AEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEK 480 (488)
T ss_dssp EEEEEEBCTTSCCEEE---EEEEE------------C--CEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCC
T ss_pred EEEEEEEECCCCCceE---EEEEe------------c--CCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCE
Confidence 2345666543321110 01110 0 012356679999999999999998775 555 3577788
Q ss_pred EEEcCCC
Q 007227 274 QFKASPY 280 (612)
Q Consensus 274 ~F~T~p~ 280 (612)
.|+|++.
T Consensus 481 ~~~T~e~ 487 (488)
T 2q7n_A 481 RHLTTEA 487 (488)
T ss_dssp CBCCCCC
T ss_pred eEECCCC
Confidence 8988764
No 174
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=90.87 E-value=0.33 Score=53.29 Aligned_cols=98 Identities=14% Similarity=0.142 Sum_probs=58.1
Q ss_pred CCCCCCcceeee-cCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQ-GKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~-~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+.. ....++++|+|....... ...-.|+|...++..+...... ...+...
T Consensus 198 ~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~------------------~~~~~~~ 259 (589)
T 3l5h_A 198 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------------------DTASTRS 259 (589)
T ss_dssp ECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT------------------SSCSCCS
T ss_pred EcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc------------------cCcCcee
Confidence 466787777643 345789999998653210 0123566665443322211000 0012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYI---WSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~---~S~~~~F~T~p~ 280 (612)
...+++|+|++.|.+||......|... ||+...|+|.+.
T Consensus 260 ~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 260 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp EEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 567899999999999999765444433 467777888654
No 175
>2lfe_A E3 ubiquitin-protein ligase HECW2; structural genomics, northeast structural genomics consortiu SGC; NMR {Homo sapiens}
Probab=90.85 E-value=1.1 Score=39.00 Aligned_cols=99 Identities=19% Similarity=0.289 Sum_probs=57.0
Q ss_pred eCCCceEEEcc--cccccCCCcccEEEEEEecC-CCCCCCEEEEEcCCCCCCCCCCCCCCCCCCCCccCCCcceEEeccC
Q 007227 41 LDDNAYIKASP--SILGMKGQNSDWLTVEYNSP-NPSVGDWIGVFSPSNFSSSTCPAENPRVYPPLLCSAPIKFQYANYS 117 (612)
Q Consensus 41 ~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 117 (612)
-++..+|++|- -+||.+ |.+.|.|.-- .-.+.||||+|--.. +||. ..+.|+-
T Consensus 31 ~~sRSsLt~S~~~ytiG~~----q~lvI~WDIKEev~a~DWIGLy~ide----~~~~------------n~ld~kn---- 86 (138)
T 2lfe_A 31 SESRSSLTASMYEYTLGQA----QNLIIFWDIKEEVDPSDWIGLYHIDE----NSPA------------NFWDSKN---- 86 (138)
T ss_dssp --CCCEEEESCSEEETTCS----CCEEEEEECCSCCCTTCEEEEEECCS----SCTT------------CCCEECC----
T ss_pred ccccceeEEEeeEEEecCC----CcEEEEEeccCccCccceEEEEEecC----CCcc------------chhhhhc----
Confidence 35556676664 456543 5699999984 788999999997643 3332 1122221
Q ss_pred CCccccccceEEEEEE------eecccceEEEEEecCCCCcEEEEeccceeccCC
Q 007227 118 SPQYKSTGKGSLKLQL------INQRSDFSFVLFTNGLLNPKVVAVSNKVTFTNP 166 (612)
Q Consensus 118 ~~~~~~~g~~~~~~~l------~n~r~~~~f~~~~~~~~~p~~~a~s~~~~~~~~ 166 (612)
-+-..+=+|.+.-++ ..-+.-+.|.+..+-.. .|-|.++.|+..||
T Consensus 87 -Rgvngt~kGqi~W~i~~~~yf~e~eTkiCFKYYhg~Sg--aLRAtTP~iTVkNP 138 (138)
T 2lfe_A 87 -RGVTGTQKGQIVWRIEPGPYFMEPEIKICFKYYHGISG--ALRATTPCITVKNP 138 (138)
T ss_dssp -TTCSSCSEEEEEECCCSSTTCCSSEEEEEEEEEETTTT--EEEEECCCEEEECC
T ss_pred -cccccceeeeEEEEEcCCCccccceeEEEEEEecCccc--ceeecCceEEeeCC
Confidence 111122234443332 12234577888877444 47788888887775
No 176
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=90.78 E-value=0.75 Score=47.05 Aligned_cols=89 Identities=13% Similarity=0.010 Sum_probs=48.4
Q ss_pred CCCCcceeeecCCCC-cEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 167 NAPVYPRLAQGKVWN-EMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 167 ~~P~~~~La~~~~~~-~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
.+|..+.+.. .+.+ +++|+|..........-.|+|...++..... ..... ++-.....|
T Consensus 4 ~~P~~l~~~~-~~~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 63 (375)
T 3t1w_A 4 SPPTNLHLEA-NPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 63 (375)
T ss_dssp CCCEEEEEEE-ETTTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCC--EEEEE-----------------ETTCCEEEE
T ss_pred CCCCccEEEe-cCCCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcc--eeEEc-----------------CCCccEEEE
Confidence 3455555532 2456 9999998764211123466776543321100 00011 112345678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
++|+|++.|.++|..... .++|.....++.
T Consensus 64 ~~L~p~t~Y~~~V~a~~~---~g~s~~~~~~~~ 93 (375)
T 3t1w_A 64 DNLSPGLEYNVSVYTVKD---DKESVPISDTII 93 (375)
T ss_dssp CCCCTTCCEEEEEEEEET---TEECCCEEEEEC
T ss_pred cCCcCCCEEEEEEEEEcC---CCCCCcEEeeEc
Confidence 999999999999987632 234555555443
No 177
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=90.61 E-value=0.81 Score=49.76 Aligned_cols=134 Identities=15% Similarity=0.173 Sum_probs=72.5
Q ss_pred ceEEEEEEeecccceEEEEEec-CCCCcE-EEEeccceeccCCCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEE
Q 007227 126 KGSLKLQLINQRSDFSFVLFTN-GLLNPK-VVAVSNKVTFTNPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVE 201 (612)
Q Consensus 126 ~~~~~~~l~n~r~~~~f~~~~~-~~~~p~-~~a~s~~~~~~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~ 201 (612)
.-+..|........|.|.+-.. ++..-. .+... ......|.+|..+++. ..+.+++.|+|....... .-.-.|+
T Consensus 341 ~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~~~-~~~~VkP~PP~nl~v~-~~~stsl~LsW~~P~~~~~~~L~YeVr 418 (483)
T 3e0g_A 341 SYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVN-ITEKVYPHTPTSFKVK-DINSTAVKLSWHLPGNFAKINFLCEIE 418 (483)
T ss_dssp CEEEEEECCTTCCCEEEEEEEECSSCEEEEEEEEC-GGGGBCCCCCEEEEEC-CSSSSSCCEEEECCSCCTTSBCCCEEE
T ss_pred EEEEEEccCCCCcEEEEEEEEEeCCCCcccceEEE-eccccCCCCCeeeEEE-EecCCeEEEEECCCCCCCCceEEEEEE
Confidence 3455665554455677766543 222100 00110 0112356677666653 235789999998764211 1234678
Q ss_pred EccCCCCC-ccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEEEEc
Q 007227 202 WGPKGGDR-TYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGT---YIWSSEYQFKA 277 (612)
Q Consensus 202 yg~~~~~~-~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~---~~~S~~~~F~T 277 (612)
|...+... +.. .++. | ...-.+.+.|.+|+|+|+|..||... .+|. ..||+...|+|
T Consensus 419 Yr~~~~~~~~~~----vsv~------------~--~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T 479 (483)
T 3e0g_A 419 IKKSNSVQEQRN----VTIQ------------G--VENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLT 479 (483)
T ss_dssp EECSSSCCCEEE----CCCB------------C--CSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCC
T ss_pred EEECCCCCceEE----EEEe------------c--cCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeEC
Confidence 87654321 110 0000 0 00123456789999999999999987 4444 35778888988
Q ss_pred CCC
Q 007227 278 SPY 280 (612)
Q Consensus 278 ~p~ 280 (612)
+.+
T Consensus 480 ~E~ 482 (483)
T 3e0g_A 480 TEA 482 (483)
T ss_dssp CCC
T ss_pred CCC
Confidence 653
No 178
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=89.74 E-value=6.3 Score=39.93 Aligned_cols=93 Identities=16% Similarity=0.129 Sum_probs=54.5
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCcc----EEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEP----FVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
-|.+|..+.+ .....++++|.|..... ....+ .|+|...+...+.. .. ..+..
T Consensus 195 ~P~~P~~~~~-~~~~~~~~~l~w~~p~~-~~g~pi~~y~v~~~~~~~~~~~~------~~---------------~~~~~ 251 (389)
T 2jll_A 195 VPSSPYGVKI-IELSQTTAKVSFNKPDS-HGGVPIHHYQVDVKEVASEIWKI------VR---------------SHGVQ 251 (389)
T ss_dssp CCCCCEEEEE-EEECSSCEEEEEECCSC-CTTSCEEEEEEEEEETTCSCCEE------EE---------------CSTTC
T ss_pred CCCCCcceEE-eeccCCEEEEEEeCCCC-CCCcceEEEEEEEEECCCcccEE------ee---------------ccCCc
Confidence 3445544444 22346899999985321 11223 45665544322210 00 01123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
....|.+|+|++.|.|+|......|...+|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 4567899999999999998765445556677788888653
No 179
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=89.42 E-value=0.94 Score=42.07 Aligned_cols=38 Identities=11% Similarity=-0.145 Sum_probs=27.3
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCcc-ccceEEEEcC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYI-WSSEYQFKAS 278 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~-~S~~~~F~T~ 278 (612)
...+|++|+|++.|.+||......|... +|+...++|.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 164 NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred cEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 4567899999999999998764444444 3556666664
No 180
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=89.01 E-value=0.61 Score=49.90 Aligned_cols=74 Identities=20% Similarity=0.378 Sum_probs=44.6
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEec
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLR 246 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~ 246 (612)
..|...|+ ...+.++++|.|..+.+..-..-.|+|.+++... .....+- ++--.+++|+
T Consensus 371 ~~~~~l~~-~~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~---~~~~~~~-----------------~~~~~~~~i~ 429 (461)
T 3csg_A 371 SVPTNLEV-VAATPTSLLISWDASYSSSVSYYRITYGETGGNS---PVQEFTV-----------------PGSKSTATIS 429 (461)
T ss_dssp CSSCCCEE-EEECSSCEEEECCCTTGGGCSEEEEEEEETTCCS---CCEEEEE-----------------ETTCCEEEEC
T ss_pred CCCcceEE-eccCCCeEEEEecCCCCCcceEEEEEEEECCCCc---cceEEEe-----------------cCCCceEEec
Confidence 35666676 4446789999997752101113456666653211 0000110 1223678999
Q ss_pred CCCCCCEEEEEEeee
Q 007227 247 ELWPNAMYTYKLGHR 261 (612)
Q Consensus 247 gL~Pgt~Y~Yrv~~~ 261 (612)
||+|||.|..+|...
T Consensus 430 ~L~p~t~Y~~~v~a~ 444 (461)
T 3csg_A 430 GLSPGVDYTITVYAY 444 (461)
T ss_dssp SCCTTCEEEEEEEEE
T ss_pred CCCCCCEEEEEEEEE
Confidence 999999999999976
No 181
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=88.79 E-value=3.2 Score=42.18 Aligned_cols=93 Identities=16% Similarity=0.144 Sum_probs=50.5
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEe
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFL 245 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|..+.+ ...+.++++|.|..........-.|+|...+.... ...... .+-....++
T Consensus 187 ~~~p~~l~~-~~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i 245 (375)
T 3t1w_A 187 VPPPTDLRF-TNIGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEED---VAELSI-----------------SPSDNAVVL 245 (375)
T ss_dssp CCCCEEEEE-ESCCSSCEEEEEECCSSCCCCEEEEEEEEGGGTTC---CEEEEE-----------------CTTCCEEEE
T ss_pred CCCCceeEE-EecccCEEEEEEcCCCCCCccEEEEEEEeCCCCCC---cEEEEc-----------------CCCcCEEEe
Confidence 345655554 23357999999987532122334666664332110 000111 112345678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007227 246 RELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 246 ~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~ 280 (612)
++|+|++.|.++|......|.... ....++|.|.
T Consensus 246 ~~L~p~t~Y~~~V~A~~~~g~s~~-~~~~~~t~p~ 279 (375)
T 3t1w_A 246 TNLLPGTEYVVSVSSVYEQHESTP-LRGRQKTGLD 279 (375)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCC-EEEEEECCCC
T ss_pred CCCCCCCEEEEEEEEEcCCCcCCc-eeeEEecCCC
Confidence 999999999999987643332221 2344566654
No 182
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=88.04 E-value=1.2 Score=37.91 Aligned_cols=74 Identities=15% Similarity=0.146 Sum_probs=42.3
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC--CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN--EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++... + ++++|+|.-....+ -..-.|+|....... ..... .+-...
T Consensus 17 ~P~~P~~l~~~~~-~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~~-----~~~~~-----------------~~~~~~ 72 (116)
T 2edb_A 17 VPDQPSSLHVRPQ-T-NCIIMSWTPPLNPNIVVRGYIIGYGVGSPYA-----ETVRV-----------------DSKQRY 72 (116)
T ss_dssp CCCCCSCEEEEEC-S-SCEEEEECCCSCTTBCCCEEEEEEEESSTTS-----EEEEE-----------------ETTCCE
T ss_pred CCCCCCCeEEEEC-C-CEEEEEEcCCCCCCCceeEEEEEEEeCCCCe-----EEEEe-----------------CCCeeE
Confidence 3556776666433 4 89999998753211 012345665321100 00111 112245
Q ss_pred EEecCCCCCCEEEEEEeeec
Q 007227 243 GFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
.+|+||+|++.|.+||....
T Consensus 73 ~~l~~L~p~t~Y~~~V~A~n 92 (116)
T 2edb_A 73 YSIERLESSSHYVISLKAFN 92 (116)
T ss_dssp EEECSCCSSSBEEEEEEEEE
T ss_pred EEeCCCCCCCEEEEEEEEEe
Confidence 67899999999999998763
No 183
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=87.56 E-value=11 Score=36.40 Aligned_cols=65 Identities=15% Similarity=0.138 Sum_probs=37.9
Q ss_pred CCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEEe
Q 007227 180 WNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKLG 259 (612)
Q Consensus 180 ~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv~ 259 (612)
.++++|+|.-... ....-.|+|...+..... ...+... .........+++|+|++.|.+||.
T Consensus 114 ~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~~-------------~~~~~~~~~~~~L~p~t~Y~~~V~ 175 (290)
T 3l5i_A 114 DNMLWVEWTTPRE-SVKKYILEWCVLSDKAPC----ITDWQQE-------------DGTVHRTYLRGNLAESKCYLITVT 175 (290)
T ss_dssp TTEEEEEEECCSS-CCCEEEEEEEEECSSSCC----CCEEEEE-------------ETTCSEEECCSCCCTTCEEEEEEE
T ss_pred CCeEEEEEeCCCC-CCCcEEEEEEECCCCCCC----CcCeEEc-------------cCCCcceEEecCcCCccEEEEEEE
Confidence 3799999987643 122346777654332110 0011100 012234566899999999999998
Q ss_pred eec
Q 007227 260 HRL 262 (612)
Q Consensus 260 ~~~ 262 (612)
...
T Consensus 176 A~n 178 (290)
T 3l5i_A 176 PVY 178 (290)
T ss_dssp EEE
T ss_pred EEe
Confidence 764
No 184
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=86.88 E-value=1.2 Score=38.02 Aligned_cols=37 Identities=14% Similarity=-0.016 Sum_probs=29.6
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
.+.+. |+|++.|.+||......|...+|+...|+|..
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 45566 99999999999876556666788888899865
No 185
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=86.64 E-value=4.5 Score=45.69 Aligned_cols=95 Identities=13% Similarity=0.009 Sum_probs=53.2
Q ss_pred CCCCcceeeecCCCCcEEEEEEeCCCC----CCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 167 NAPVYPRLAQGKVWNEMTVTWTSGYGI----NEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 167 ~~P~~~~La~~~~~~~m~V~W~T~~~~----~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
.+|..+.+ ...+.++++|+|.-.... ....-.|+|............ .... ..++....
T Consensus 361 ~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~---~~~~-------------~~~~~~~~ 423 (731)
T 2v5y_A 361 RGPRKLEV-VEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVRE---EVSW-------------DTENSHPQ 423 (731)
T ss_dssp CCCEEEEE-EEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEE---EEEC-------------CSSCSSCE
T ss_pred CCCceeEE-EeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccce---eEEE-------------EecCCcce
Confidence 45655544 233578999999875210 001235777654321110000 0000 01122345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
.+|++|+|++.|.+||......|.. .|....++|..
T Consensus 424 ~~i~~L~p~t~Y~~~V~A~n~~G~s-~S~~~~~~T~~ 459 (731)
T 2v5y_A 424 HTITNLSPYTNVSVKLILMNPEGRK-ESQELIVQTDE 459 (731)
T ss_dssp EEECSCCSSCEEEEEEEEECSSCEE-ECCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCCCC-CCceEEEEccC
Confidence 6899999999999999876444443 47778888864
No 186
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=85.41 E-value=3 Score=47.06 Aligned_cols=36 Identities=17% Similarity=0.305 Sum_probs=25.1
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcc-ccceEEEEc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYI-WSSEYQFKA 277 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~-~S~~~~F~T 277 (612)
.++|++|+|++.|.|||......|... .+....|+|
T Consensus 224 ~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t 260 (680)
T 1zlg_A 224 RVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRS 260 (680)
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEc
Confidence 467899999999999998764444222 234455666
No 187
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=85.37 E-value=1.7 Score=40.68 Aligned_cols=91 Identities=16% Similarity=0.235 Sum_probs=51.8
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|....+.... .+.+.|.|........-.-.|+|+...+..+... .. .......
T Consensus 98 kP~pP~~l~~~~~~-~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~~----~~------------------~~~~~~~ 154 (199)
T 2b5i_C 98 IPWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFS 154 (199)
T ss_dssp ECCCCEEEEEEEEE-TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEEE----EE------------------CSSCEEE
T ss_pred ecCCCcEEEEEECC-CCCEEEEECCCCCCCceEEEEEEeecCCcccEEE----ec------------------cCceEEE
Confidence 46677766664432 4799999998742111234577776443332211 00 0123456
Q ss_pred ecCCCCCCEEEEEEeeecCC---CCc---cccceEEEEcC
Q 007227 245 LRELWPNAMYTYKLGHRLFN---GTY---IWSSEYQFKAS 278 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~---g~~---~~S~~~~F~T~ 278 (612)
|.+|+|+++|..||...... ... .||+...|.|.
T Consensus 155 l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 155 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp ECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred ecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 79999999999999987422 122 35556666653
No 188
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=84.97 E-value=2.2 Score=42.68 Aligned_cols=105 Identities=14% Similarity=0.188 Sum_probs=56.1
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCC--CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINE--AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++. ...+++.|.|........ -.-.|+|...++..+.. .......|....- .........
T Consensus 199 ~P~pP~~l~~~--~~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~-----~~~~~~~c~~~~~---~~~~~~~~~ 268 (314)
T 3bpo_C 199 KPDPPHIKNLS--FHNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNV-----FYVQEAKCENPEF---ERNVENTSC 268 (314)
T ss_dssp ECCCCEEEEEE--EETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEE-----EEESCCCCCCTTS---SCCCSSEEE
T ss_pred eeCCCCEEEEE--EcCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceE-----Eeccccccccccc---ccccCCceE
Confidence 36677766664 345799999988742110 12346666544332210 0110111221000 001123567
Q ss_pred EEecCCCCCCEEEEEEeeecC------CCC-ccccceEEEEcCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLF------NGT-YIWSSEYQFKASP 279 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~------~g~-~~~S~~~~F~T~p 279 (612)
+.|.+|+|+++|..||..... .|. ..||+...|.+.+
T Consensus 269 ~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~ 312 (314)
T 3bpo_C 269 FMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR 312 (314)
T ss_dssp EEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCCC
T ss_pred EEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecccC
Confidence 789999999999999997742 232 3466677775543
No 189
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=84.69 E-value=2.4 Score=41.56 Aligned_cols=93 Identities=16% Similarity=0.202 Sum_probs=53.8
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|....+... ..+.+.|.|........-.-.|+|...++..+... .. .......
T Consensus 136 kP~PP~nl~v~~~-~~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~~----~~------------------~~~~~~~ 192 (247)
T 2erj_C 136 IPWAPENLTLHKL-SESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTEQ----SV------------------DYRHKFS 192 (247)
T ss_dssp ECCCCEEEEEEES-SSSCEEEEEECSSCCTTEEEEEEEECSSCSSCEEE----EE------------------CSSCEEE
T ss_pred EeCCCCeEEEEEC-CCCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEEE----ec------------------CCceEEE
Confidence 4677776666543 34799999998742111123477776444333211 00 0113456
Q ss_pred ecCCCCCCEEEEEEeeecCCC---Cc---cccceEEEEcCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNG---TY---IWSSEYQFKASPY 280 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g---~~---~~S~~~~F~T~p~ 280 (612)
|.+|+|+++|..||......+ .. .||+...|.|.+.
T Consensus 193 l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 193 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp ESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred ecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 799999999999999875321 22 4667778887543
No 190
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=84.26 E-value=0.65 Score=38.74 Aligned_cols=62 Identities=16% Similarity=0.175 Sum_probs=37.5
Q ss_pred CCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEEEE
Q 007227 179 VWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTYKL 258 (612)
Q Consensus 179 ~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Yrv 258 (612)
+.++++|.|..... .-..-.|+|....+... ..... -+|-.-.+.|+||+|||+|.-+|
T Consensus 18 t~~S~~lsW~~p~~-~v~~Y~I~y~~~~g~~~---~~~~~-----------------v~g~~~s~~l~~L~PgT~Y~V~v 76 (95)
T 2h41_A 18 TASSFVVSWVSASD-TVSGFRVEYELSEEGDE---PQYLD-----------------LPSTATSVNIPDLLPGRKYIVNV 76 (95)
T ss_dssp GGGCEEEECCCSCT-TEEEEEEEEEETTTCCC---CEEEE-----------------EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCeEEEEECCCCC-CccEEEEEEEeCCCCCc---ceEEE-----------------CCCCccEEEECCCCCCCEEEEEE
Confidence 57899999987632 11234566665433110 00011 12334567899999999999988
Q ss_pred eee
Q 007227 259 GHR 261 (612)
Q Consensus 259 ~~~ 261 (612)
...
T Consensus 77 ~a~ 79 (95)
T 2h41_A 77 YQI 79 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 191
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=84.13 E-value=6.5 Score=41.12 Aligned_cols=96 Identities=20% Similarity=0.233 Sum_probs=54.1
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCCCC--------ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccC
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA--------EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRD 236 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~--------~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~ 236 (612)
-|.+|..+.+.... +.+.|+|......... .-.|+|+..+ ..+.... +.. .
T Consensus 108 ~p~pP~~l~v~~~~--~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~~---~~~---------------~ 166 (419)
T 2gys_A 108 QPPEPRDLQISTDQ--DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDAA---ILL---------------S 166 (419)
T ss_dssp CCCCCEEEEEEEET--TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTCE---EEE---------------E
T ss_pred cCCCCCceEEEecC--CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhhee---eec---------------c
Confidence 56678777665443 6999999987531100 1245555543 2221110 000 0
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCC---CCc---cccceEEEEcCCCC
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFN---GTY---IWSSEYQFKASPYP 281 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~---g~~---~~S~~~~F~T~p~~ 281 (612)
....+.+.+.+|.|+++|..||...... +.. .||+...|+|++..
T Consensus 167 ~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~ 217 (419)
T 2gys_A 167 NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD 217 (419)
T ss_dssp SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC
T ss_pred cceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc
Confidence 1123333345999999999999977421 222 35688999998764
No 192
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=83.96 E-value=0.53 Score=37.80 Aligned_cols=41 Identities=20% Similarity=0.332 Sum_probs=27.4
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 237 PGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 237 ~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
||-.+.-+|.||+||.+|.=++.+-...|... ...+.|+|-
T Consensus 34 Pgh~nSYtIsGLkPGvtYegQLisV~r~g~~E-vtrfdfTT~ 74 (89)
T 1q38_A 34 PGHLNSYTIKGLKPGVVYEGQLISIQQYGHQE-VTRFDFTTT 74 (89)
T ss_dssp CSSSSCCCCCCCCTTCCEEEEEEEECTTSCCC-EEEEEECSS
T ss_pred CCccceEEEeccCCCcEEEEEEEeeeecccCC-ceEEEEEec
Confidence 45566668999999999999998764333211 234566653
No 193
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=82.29 E-value=2.1 Score=40.41 Aligned_cols=98 Identities=14% Similarity=0.111 Sum_probs=48.1
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCC-C----CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCC
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGI-N----EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPG 238 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~-~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g 238 (612)
.-|.+|....+... ..+...|+|...... . .-.-.|+|...++.... ..... ...+
T Consensus 96 Vkp~PP~nl~~~~~-~~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~~-----~~~~~-------------~~~~ 156 (207)
T 1iar_B 96 VKPRAPGNLTVHTN-VSDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPADF-----RIYNV-------------TYLE 156 (207)
T ss_dssp BCCCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSCE-----EEEEE-------------CSSC
T ss_pred cccCCCCCeEEEEc-cCCCEEEEECCCCCccccccccEEEEEEEccCCCchhh-----eeeee-------------ecCC
Confidence 35677776666532 346899999887421 0 01245666654332110 00110 0113
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCCC
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTY---IWSSEYQFKASPY 280 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~---~~S~~~~F~T~p~ 280 (612)
......+.+|.||++|.-||......... .||....|+|.+.
T Consensus 157 ~~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 157 PSLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp CEEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred cEEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 34556678999999999999987432122 4677889998764
No 194
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=82.24 E-value=3.2 Score=38.94 Aligned_cols=39 Identities=23% Similarity=0.169 Sum_probs=30.8
Q ss_pred EEEecCCCCCCEEEEEEeeecC--CCCccccceEEEEcCCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLF--NGTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~--~g~~~~S~~~~F~T~p~ 280 (612)
.++|++|+|++.|..+|..... .+...||+...|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 4789999999999999986532 34556888899998764
No 195
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=81.68 E-value=2.3 Score=49.71 Aligned_cols=40 Identities=15% Similarity=0.056 Sum_probs=30.5
Q ss_pred EEEEecCCCCCCEEEEEEee-ecCCCC----ccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGH-RLFNGT----YIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~-~~~~g~----~~~S~~~~F~T~p~ 280 (612)
...+|++|+|+|.|.|||.. -...|. ..+|+...|+|.+.
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~ 593 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDAT 593 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCC
Confidence 55789999999999999987 322333 45788888998663
No 196
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=81.25 E-value=11 Score=42.59 Aligned_cols=40 Identities=13% Similarity=-0.045 Sum_probs=30.6
Q ss_pred EEEEecCCCCCCEEEEEEeee--cCCCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHR--LFNGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~--~~~g~~~~S~~~~F~T~p~ 280 (612)
...+|++|+|++.|.|||... ...|...+|....++|.+.
T Consensus 316 ~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~ 357 (731)
T 2v5y_A 316 TSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCA 357 (731)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCC
T ss_pred ceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCC
Confidence 456789999999999999865 4445556777788888653
No 197
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=80.53 E-value=2.3 Score=47.14 Aligned_cols=75 Identities=13% Similarity=0.166 Sum_probs=48.2
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCC--CCC-CccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYG--INE-AEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~--~~~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h 241 (612)
-|.+|..|.+ ...+.++++++|..... ..+ ..-.||+...++..|...+.+ ++.
T Consensus 9 ~P~pP~~P~v-~~~~~~sv~L~W~~P~~DGgs~I~~Y~vE~~~~~~~~W~~v~~~------------------~~t---- 65 (573)
T 3uto_A 9 EPEPPRFPII-ENILDEAVILSWKPPALDGGSLVTNYTIEKREAMGGSWSPCAKS------------------RYT---- 65 (573)
T ss_dssp CCCCCEEEEE-EEECSSCEEEEEECCSCCSSSCCCEEEEEEEESSSCCCEEEEEE------------------SSS----
T ss_pred CCccCCCCEE-EEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeccc------------------cCC----
Confidence 4667877765 33357899999987532 111 124677777776666433210 011
Q ss_pred EEEecCCCCCCEEEEEEeeec
Q 007227 242 TGFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
..+++||.||+.|.+||....
T Consensus 66 ~~~V~~L~~g~~Y~FRV~A~N 86 (573)
T 3uto_A 66 YTTIEGLRAGKQYEFRIIAEN 86 (573)
T ss_dssp EEEECCCCTTCEEEEEEEEEE
T ss_pred EEEeCCCCCCCcEeEEEEEEc
Confidence 246899999999999999763
No 198
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=80.52 E-value=15 Score=38.16 Aligned_cols=38 Identities=18% Similarity=0.142 Sum_probs=29.1
Q ss_pred EEEecCCCCCCEEEEEEeeec--CCCCccccceEEEEcCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRL--FNGTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~--~~g~~~~S~~~~F~T~p 279 (612)
..+|++|+|++.|..||.... ..|...+|+...++|..
T Consensus 164 ~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 164 RHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp EEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred EEEEcCCCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 467999999999999998753 13445678777888764
No 199
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=80.39 E-value=5.4 Score=43.81 Aligned_cols=42 Identities=12% Similarity=-0.017 Sum_probs=30.4
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEEEEcCCCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGT---YIWSSEYQFKASPYP 281 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~---~~~S~~~~F~T~p~~ 281 (612)
...++|++|+|++.|.+||......|. ..++....++|.+.+
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~ 443 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccC
Confidence 356789999999999999987633332 224667888887653
No 200
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=79.23 E-value=2 Score=41.35 Aligned_cols=38 Identities=21% Similarity=0.188 Sum_probs=28.1
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
..++++|+|++.|.+||......|...+|....++|.+
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 45678999999999999876444555567777887754
No 201
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=79.19 E-value=10 Score=37.97 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=29.7
Q ss_pred EEEEecCCCCCCEEEEEEeeec--CCCCccccceEEEEcCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRL--FNGTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~--~~g~~~~S~~~~F~T~p 279 (612)
...+|.+|+|++.|..+|.... ..|...+|+...++|..
T Consensus 159 ~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 159 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp TEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred ceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 3578999999999999997653 23445678888888853
No 202
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=77.89 E-value=20 Score=34.10 Aligned_cols=35 Identities=6% Similarity=-0.015 Sum_probs=24.8
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
+++|.|++.|.+||......|...+|++..+.+++
T Consensus 167 ~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp CBEESSSEEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred eecCccCCceEEEEEEECCCcCCCCcccEEeccCC
Confidence 56899999999999877545555667766665544
No 203
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=76.23 E-value=9.9 Score=39.69 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=27.1
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCC--Cc---cccceEEEEc
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNG--TY---IWSSEYQFKA 277 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g--~~---~~S~~~~F~T 277 (612)
..+.|.+|+||+.|..||......| .. .||+...|+|
T Consensus 377 ~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 377 HSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp SEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred cEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 3578999999999999999775332 22 4566777765
No 204
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=74.52 E-value=5.8 Score=36.44 Aligned_cols=23 Identities=13% Similarity=0.137 Sum_probs=19.3
Q ss_pred EEEEEecCCCCCCEEEEEEeeec
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
...+.|+||+||+.|.++|....
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~~ 186 (201)
T 2ha1_A 164 ATSVNIPDLLPGRKYIVNVYQIS 186 (201)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEc
Confidence 34568999999999999998763
No 205
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=71.54 E-value=1.4 Score=48.19 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=29.6
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
...+|+||+||+.|.++|......| ..+|...+|+|+
T Consensus 552 ~~~~~~~L~p~t~Y~~~V~A~n~~G-~~~S~~~~~~T~ 588 (589)
T 3l5h_A 552 TEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTP 588 (589)
T ss_dssp CBCCBCSCCSSCCEECCEEEEETTE-EEECCCCEECCC
T ss_pred cEEEecCCCCCCEEEEEEEEEeCCC-CCCCCCeEEecC
Confidence 3457899999999999998765455 567888888885
No 206
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=70.62 E-value=6.7 Score=36.30 Aligned_cols=36 Identities=8% Similarity=-0.130 Sum_probs=24.0
Q ss_pred EEEEecCC-CCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 241 HTGFLREL-WPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 241 h~a~l~gL-~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
..+.|++| +|++.|.+||......|... +....|.+
T Consensus 62 ~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~-s~~~~~~~ 98 (215)
T 1bqu_A 62 TSCTVDYSTVYFVNIEVWVEAENALGKVT-SDHINFDP 98 (215)
T ss_dssp TEEECSSCCCTTSCEEEEEEEEETTEEEE-CCCEEECG
T ss_pred ceEEEcCCccccccEEEEEEEEecccCcc-CCcEEecc
Confidence 45689999 99999999998763223221 33455643
No 207
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=69.23 E-value=1.6 Score=51.08 Aligned_cols=39 Identities=23% Similarity=0.386 Sum_probs=31.6
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007227 243 GFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 243 a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p~~g 282 (612)
++|++|+|| +|.+||......|...||+...|+|++.+.
T Consensus 853 ~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p~ 891 (897)
T 2dtg_E 853 CRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYLD 891 (897)
T ss_dssp CCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC-
T ss_pred EEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCCC
Confidence 478999999 699999876555666789999999988754
No 208
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=66.91 E-value=7.1 Score=37.28 Aligned_cols=40 Identities=20% Similarity=0.039 Sum_probs=32.0
Q ss_pred EEEEecCCCCCCEEEEEEeeecC--CCCccccceEEEEcCCC
Q 007227 241 HTGFLRELWPNAMYTYKLGHRLF--NGTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~~--~g~~~~S~~~~F~T~p~ 280 (612)
+.++|.+|+|++.|..+|..... .+...||+...|+|.+.
T Consensus 173 ~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 173 HTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred cEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 35679999999999999986532 45567899999999765
No 209
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=65.20 E-value=7.8 Score=37.66 Aligned_cols=30 Identities=13% Similarity=0.021 Sum_probs=21.8
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007227 242 TGFLRELWPNAMYTYKLGHRLFNGTYIWSS 271 (612)
Q Consensus 242 ~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~ 271 (612)
..+|++|+|++.|.|||......|...+|.
T Consensus 255 ~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~ 284 (305)
T 2nzi_A 255 RYTVINLFGKTSYQFRVIAENKFGLSKPSE 284 (305)
T ss_dssp EEEECSCCSSCEEEEEEEEEETTEECCCCC
T ss_pred eEEecCCCCCCeEEEEEEEEeCCcccCCcC
Confidence 457899999999999998764334333443
No 210
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=63.50 E-value=17 Score=34.14 Aligned_cols=63 Identities=13% Similarity=0.136 Sum_probs=40.1
Q ss_pred CCeEEEecccccceeeecccCceeccCCCccccCCCCCeEEEEECCCCCCCCCCCCCCCCceeeeeCCceEEEEEEecCC
Q 007227 491 KVDIAVFGHVHNYERICPIYQNICTNKEKHYYKGSLNGTIHIAAGGAGASLSPFTTLQTTWSLYRDYDHGFVKLTAFDHS 570 (612)
Q Consensus 491 ~VdlvlsGH~H~YeRt~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~ 570 (612)
+.|++++||+|...... .+++.+|-.|+.|.... ....+|.+++. .
T Consensus 143 ~~d~vi~GHtH~~~~~~------------------~~~~~~iNpGs~~~pr~-------------~~~~sy~il~~---~ 188 (208)
T 1su1_A 143 QNDVLVYGHTHLPVAEQ------------------RGEIFHFNPGSVSIPKG-------------GNPASYGMLDN---D 188 (208)
T ss_dssp TTCEEECCSSCCCEEEE------------------ETTEEEEECCCSSCCCT-------------TCCCEEEEEET---T
T ss_pred CCCEEEECCcccCccEE------------------eCCEEEEECCCCcCCCC-------------CCCCEEEEEEC---C
Confidence 45999999999754331 13566777777654311 11356778763 2
Q ss_pred eEEEEEEECCCCcEEEEEEE
Q 007227 571 NLLFEYKKSRDGKVYDSFRI 590 (612)
Q Consensus 571 ~L~~~~~~~~dG~v~D~f~i 590 (612)
.++++ .-+|+++.+..|
T Consensus 189 --~~~~~-~~~~~~~~~~~~ 205 (208)
T 1su1_A 189 --VLSVI-ALNDQSIIAQVA 205 (208)
T ss_dssp --EEEEE-ETTTCCEEEEEE
T ss_pred --eEEEE-EeCCCEEEEEec
Confidence 45555 457889988887
No 211
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=59.53 E-value=3.3 Score=43.10 Aligned_cols=39 Identities=5% Similarity=0.136 Sum_probs=11.1
Q ss_pred EEecC-CCCCCEEEEEEeeecC---CCC---ccccceEEEEcCCCC
Q 007227 243 GFLRE-LWPNAMYTYKLGHRLF---NGT---YIWSSEYQFKASPYP 281 (612)
Q Consensus 243 a~l~g-L~Pgt~Y~Yrv~~~~~---~g~---~~~S~~~~F~T~p~~ 281 (612)
..|.+ |+|++.|..||..... .+. ..||+...|+|+..+
T Consensus 292 ~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~~ 337 (380)
T 3lb6_C 292 TYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDLS 337 (380)
T ss_dssp CC------------CCEEEEECTTTCSSCCCCCCCCC---------
T ss_pred EEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCCC
Confidence 35788 9999999999987632 112 346788889987643
No 212
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=56.23 E-value=16 Score=40.65 Aligned_cols=54 Identities=20% Similarity=0.303 Sum_probs=34.0
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCc-cccceEEEEcCCCCCCCCceEEEEEecCCCC
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTY-IWSSEYQFKASPYPGQDSLQQVIIFGDMGKD 298 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~-~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~ 298 (612)
..|+.++++|+|+|+|.|+|.....+|.. .-++.-..+|.+.+ +.+-+-|.|..
T Consensus 111 ~~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~~------~~~~v~~~Ga~ 165 (608)
T 2uvf_A 111 VMQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAKP------QIVNVRDFGAI 165 (608)
T ss_dssp CCCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCCC------CEEEGGGGTCC
T ss_pred eeeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccCC------CEEeccccccc
Confidence 45778899999999999999874333321 12455566665542 24445565543
No 213
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=52.87 E-value=18 Score=35.44 Aligned_cols=75 Identities=11% Similarity=-0.021 Sum_probs=41.7
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC-CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
-|.+|..+... ..+.++++++|.-+.... ...-.|+|...+.... .|.. ..+-...+
T Consensus 103 ~P~~P~~l~~~-~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~~-------------~~~~--------~~~~~~~~ 160 (303)
T 1i1r_A 103 PPEKPKNLSCI-VNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFA-------------DCKA--------KRDTPTSC 160 (303)
T ss_dssp CCCCCEEEEEE-EETTSCCEEEEECCSCCSSCCEEEEEEEETTEECC-------------CEEC--------CSSCTTEE
T ss_pred CCCCCeeeEEE-ECCCCcEEEEccCCCCCCCCcCEEEEEEecCCCCc-------------cCCC--------cCCCceEE
Confidence 35556555442 234588999999765321 1122445543221000 0100 01223467
Q ss_pred EecCC-CCCCEEEEEEeee
Q 007227 244 FLREL-WPNAMYTYKLGHR 261 (612)
Q Consensus 244 ~l~gL-~Pgt~Y~Yrv~~~ 261 (612)
.+++| +|++.|.+||...
T Consensus 161 ~i~~L~~p~t~Y~f~V~A~ 179 (303)
T 1i1r_A 161 TVDYSTVYFVNIEVWVEAE 179 (303)
T ss_dssp ECSSCCCTTSCEEEEEEEE
T ss_pred EECCcCcccccEEEEEEEE
Confidence 89999 9999999999876
No 214
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=51.59 E-value=82 Score=28.64 Aligned_cols=38 Identities=8% Similarity=-0.114 Sum_probs=25.6
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 239 YIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 239 ~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
...++.+.+|.|++.|.++|......|. ..|....|.+
T Consensus 66 ~~~~~~~~~L~~~~~Y~~~V~A~N~~G~-~~s~~~~~~~ 103 (215)
T 1cd9_B 66 NNCSIPRKNLLLYQYMAIWVQAENMLGS-SESPKLCLDP 103 (215)
T ss_dssp CEEEEEGGGCCTTSCEEEEEEEEETTEE-EECCCEEECG
T ss_pred cEEEECCcccccceEEEEEEEEECCCCC-ccCccEEEch
Confidence 3466788999999999999986532222 2244556654
No 215
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=51.23 E-value=28 Score=37.22 Aligned_cols=78 Identities=10% Similarity=0.144 Sum_probs=49.7
Q ss_pred CceEEEEEecCCCCCCCCCCcccccccChHHHHHHHHHhc---CCCCEEEEcCccccCC------Cc----------ccH
Q 007227 285 SLQQVIIFGDMGKDEADGSNEYNNFQRGSLNTTRQLIQDL---KNIDIVFHIGDICYAN------GY----------ISQ 345 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~s~~~~~~l~~~~---~~pdfvl~~GDi~Y~~------g~----------~~~ 345 (612)
.++++++.+.......+ -.| .-+..+++.. .+||.+|++|.+++.. |. ...
T Consensus 146 ~~l~ivvAsGPyT~sdn--l~y--------epL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t 215 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDN--FSL--------ELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKT 215 (460)
T ss_dssp SCEEEEEEESCCSCSSC--CCC--------HHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSS
T ss_pred CCcEEEEEeCCccCCCc--cCh--------HHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccC
Confidence 45899999998765431 122 2345555542 2699999999998654 21 233
Q ss_pred HHHHHHh-h----hccccCCCeEEccCCCccC
Q 007227 346 WDQFTAQ-I----EPIASTVPYMIASGNHERD 372 (612)
Q Consensus 346 wd~f~~~-i----~~l~~~vP~~~~~GNHD~~ 372 (612)
++++|+. + +.+...+-++.++|+||..
T Consensus 216 ~~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 216 LDELFLKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHHHHHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEeCCccccc
Confidence 4554432 3 3344556789999999984
No 216
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=50.06 E-value=78 Score=28.78 Aligned_cols=93 Identities=13% Similarity=0.034 Sum_probs=49.2
Q ss_pred CCCCCcceeeecCCCCcEEEEEEeCCCCC-CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEE
Q 007227 166 PNAPVYPRLAQGKVWNEMTVTWTSGYGIN-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGF 244 (612)
Q Consensus 166 ~~~P~~~~La~~~~~~~m~V~W~T~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~ 244 (612)
|.+|.-+.. ...+.+.|+++|.-+.... +..-.|+|...+...+. -|.. ... ......+..
T Consensus 4 P~~P~nl~c-~~~~~~~~~c~W~p~~~~~~~~~Y~l~y~~~~~~~~~------------~c~~-~~~----~~~~~c~~~ 65 (210)
T 3n06_B 4 PGKPEIFKC-RSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMH------------ECPD-YIT----GGPNSCHFG 65 (210)
T ss_dssp CCCCEEEEE-EBSSSSCEEEEEECCSSSCCCSEEEEEEEETTCCCCE------------ECSC-SST----TCTTEEEEC
T ss_pred CCCCeEeEE-EeCCCCeEEEEECCCCCCCCCceEEEEEEECCCCccc------------cCCC-CCC----CCCeEEEeC
Confidence 344544443 3456899999999775321 22335666543321110 1210 000 012345556
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007227 245 LRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKA 277 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T 277 (612)
+.+|.|.+.|..+|......|.. .+....|.+
T Consensus 66 ~~~l~~~~~Y~~~V~A~N~~G~~-~s~~~~~~~ 97 (210)
T 3n06_B 66 KQYTSMWRTYIMMVNATNQMGSS-FSDELYVDV 97 (210)
T ss_dssp GGGCCSSSCEEEEEEEEETTEEE-ECCCEEECG
T ss_pred CCCcccceeEEEEEEEEcCCCCe-eCCcEEEch
Confidence 68899999999999865322322 244556654
No 217
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=46.14 E-value=8.5 Score=36.46 Aligned_cols=16 Identities=25% Similarity=0.376 Sum_probs=13.2
Q ss_pred hCCCeEEEecccccce
Q 007227 489 KYKVDIAVFGHVHNYE 504 (612)
Q Consensus 489 k~~VdlvlsGH~H~Ye 504 (612)
..+++++++||+|...
T Consensus 176 ~~~~~~vv~GHth~~~ 191 (221)
T 1g5b_A 176 IKGADTFIFGHTPAVK 191 (221)
T ss_dssp CBTSSEEEECSSCCSS
T ss_pred ccCCCEEEECCCCCcc
Confidence 3578999999999853
No 218
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=43.66 E-value=45 Score=33.24 Aligned_cols=84 Identities=13% Similarity=0.044 Sum_probs=44.0
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCCC-C-----ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCC
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINE-A-----EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~-~-----~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~ 237 (612)
.-|.+|....+......+.+.|+|..+...+. . .-.|+|+..+...+... ... .
T Consensus 211 VkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~~~~~~----~~~----------------~ 270 (306)
T 3d85_D 211 IKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDR----VFT----------------D 270 (306)
T ss_dssp BCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CE----EEE----------------S
T ss_pred EecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCCccEEE----eec----------------c
Confidence 46778888877653345899999998643111 1 23677776543222110 000 0
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCccccce
Q 007227 238 GYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSSE 272 (612)
Q Consensus 238 g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~ 272 (612)
... ..| .+++.|..||......|...||+.
T Consensus 271 ~ts--~~l---~~~~~Y~vqVRa~~~~~~G~WSeW 300 (306)
T 3d85_D 271 KTS--ATV---ICRKNASISVRAQDRYYSSSWSEW 300 (306)
T ss_dssp SSE--EEE---CCCSSCEEEEEEEESSSCCCCCCC
T ss_pred ccE--EEE---eCCCeEEEEEEeccCCCCCCCCCC
Confidence 011 122 469999999998754455567764
No 219
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=39.72 E-value=15 Score=34.46 Aligned_cols=81 Identities=11% Similarity=-0.077 Sum_probs=46.5
Q ss_pred cCCCCcEEEEEEeCCCCCCCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEEEecCCCCCCEEEE
Q 007227 177 GKVWNEMTVTWTSGYGINEAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTGFLRELWPNAMYTY 256 (612)
Q Consensus 177 ~~~~~~m~V~W~T~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a~l~gL~Pgt~Y~Y 256 (612)
..+.+.+.|.|.-... .-.-.|.|..++..... ...... ..-..++|.+|+|++.|..
T Consensus 118 ~~~~~~i~V~~~~p~~--~l~Y~v~y~~~~~~~~~---~~~~~~-----------------~~~~~~~i~~L~p~t~Ycv 175 (206)
T 4doh_B 118 TKDGFHLVIELEDLGP--QFEFLVAYWRREPGAEE---HVKMVR-----------------SGGIPVHLETMEPGAAYCV 175 (206)
T ss_dssp EEETTEEEEEECCCCT--TCEEEEEEEESSSSCCC---EEEEEC-----------------CSSSEEEEEECCSSSCEEE
T ss_pred EeCCCEEEEEecCCCC--cEEEEEEEEEcCCCcee---EEeEEc-----------------cCCeEEEEeCCCCCCcEEE
Confidence 3467899999975321 12345667665432210 000010 0013467999999999999
Q ss_pred EEeeecC--CCCccccceEEEEcCC
Q 007227 257 KLGHRLF--NGTYIWSSEYQFKASP 279 (612)
Q Consensus 257 rv~~~~~--~g~~~~S~~~~F~T~p 279 (612)
+|..... ++...+|+...|.|..
T Consensus 176 ~Vra~~~~~~~~g~~S~~~C~~t~~ 200 (206)
T 4doh_B 176 KAQTFVKAIGRYSAFSQTECVEVQG 200 (206)
T ss_dssp EEEEEEGGGTEECCCCCCEEECC--
T ss_pred EEEEEecCCCCCCCCCCCEeEEccc
Confidence 9986531 2444577778887753
No 220
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=37.42 E-value=78 Score=35.68 Aligned_cols=44 Identities=14% Similarity=0.165 Sum_probs=29.5
Q ss_pred ccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccc---eEEEEcCCC
Q 007227 234 WRDPGYIHTGFLRELWPNAMYTYKLGHRLFNGTYIWSS---EYQFKASPY 280 (612)
Q Consensus 234 ~~~~g~~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~---~~~F~T~p~ 280 (612)
|...+-.+.|..++|.||+ |..+|.... ....|++ ...|+-.|+
T Consensus 737 W~~~~~~~~~~ytnL~pG~-Y~f~V~a~n--~~g~w~~~~~~l~i~I~Pp 783 (795)
T 4a2l_A 737 WYYLTDSRTVSYSNLPQGT-YQFLVKAAN--SDGKWNPIPTALEIIVLPI 783 (795)
T ss_dssp CEEESSCCEEEEECCCSEE-EEEEEEEEC--TTSCBCSSCEEEEEEECCC
T ss_pred ccCCCCcCeEEecccCCCe-EEEEEEEEC--CCCccCCCceEEEEEEECC
Confidence 4333345678999999986 888998763 3346764 466666664
No 221
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=37.25 E-value=60 Score=32.99 Aligned_cols=21 Identities=14% Similarity=-0.094 Sum_probs=16.7
Q ss_pred ecCCCCCCEEEEEEeeecCCC
Q 007227 245 LRELWPNAMYTYKLGHRLFNG 265 (612)
Q Consensus 245 l~gL~Pgt~Y~Yrv~~~~~~g 265 (612)
=++|.+|+.|||.|.....++
T Consensus 75 Dt~~~~GttYyYwVk~~~~ng 95 (344)
T 3b4n_A 75 DADTNSGLNYWYWVDVVSENQ 95 (344)
T ss_dssp ECCCCTTCCCEEEEEEEETTC
T ss_pred ecCcCCCcEEEEEEEEecCCC
Confidence 378999999999998764333
No 222
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=33.33 E-value=2.5e+02 Score=28.62 Aligned_cols=36 Identities=19% Similarity=0.403 Sum_probs=28.5
Q ss_pred Eec-CCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007227 244 FLR-ELWPNAMYTYKLGHRLFNGTYIWSSEYQFKASP 279 (612)
Q Consensus 244 ~l~-gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~p 279 (612)
.++ +|.|++.|..||......|...||+...|+|..
T Consensus 270 ~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~ 306 (414)
T 3se4_A 270 VFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEI 306 (414)
T ss_dssp EEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEETTC
T ss_pred cCCcccccCccEEEEEEEecCCCcccccccccccchh
Confidence 344 699999999999987556667788888898764
No 223
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=31.22 E-value=3e+02 Score=27.87 Aligned_cols=28 Identities=11% Similarity=0.194 Sum_probs=20.0
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCC
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYG 192 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~ 192 (612)
-|.+|.-..+.-....++|.|+|.-+.+
T Consensus 31 ~~~pP~nl~v~~~~~~~~v~LsW~p~~~ 58 (380)
T 3lb6_C 31 KVNPPQDFEIVDPGYLGYLYLQWQPPLS 58 (380)
T ss_dssp CCCCCEEEEEECCSSSSEEEEEEECCCC
T ss_pred cCCcCCceEEEecCcCceEEEEECCCCC
Confidence 3677877776433346899999998754
No 224
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=29.07 E-value=3.9e+02 Score=25.61 Aligned_cols=100 Identities=11% Similarity=0.030 Sum_probs=48.0
Q ss_pred CCCCCCcceeeecCCCCcEEEEEEeCCCCC-CCccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeEEEE
Q 007227 165 NPNAPVYPRLAQGKVWNEMTVTWTSGYGIN-EAEPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYIHTG 243 (612)
Q Consensus 165 ~~~~P~~~~La~~~~~~~m~V~W~T~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~h~a 243 (612)
-|.+|..+........+.|+++|..+.+.. +..-.|+|...+..-... .... . -|.. . .......+
T Consensus 98 ~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~~~-~~~~-~----~~~~---~----~~~~~~~~ 164 (313)
T 2d9q_B 98 PPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQ-GDSI-L----DCVP---K----DGQSHCSI 164 (313)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSCSC-CCCE-E----EECC---C----TTCSEEEE
T ss_pred CCCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcccC-Cccc-c----cCCC---C----CCCcEEEE
Confidence 345565555422224689999999875321 112345555432110000 0000 0 0110 0 01133445
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007227 244 FLRELWPNAMYTYKLGHRLFNGTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~~~~F~T~ 278 (612)
..++|.|.+.|.+||.....-|. ..|....|.+.
T Consensus 165 ~~~~L~~~~~Y~f~V~A~N~~G~-~~s~~~~~~~~ 198 (313)
T 2d9q_B 165 PRKHLLLYQNMGIWVQAENALGT-SMSPQLCLDPM 198 (313)
T ss_dssp EGGGCCSSSCEEEEEEEEETTEE-EECCCEEECGG
T ss_pred CccccccceeEEEEEEEECCCCC-ccCccEEEehh
Confidence 55779999999999986532232 12344556543
No 225
>1noa_A Neocarzinostatin; antibacterial protein; 1.50A {Streptomyces carzinostaticus} SCOP: b.1.7.1 PDB: 1nco_A 1o5p_A* 1j5h_A 1j5i_A* 2g0k_A 2g0l_A* 2cbq_A* 2cbo_A* 2cbm_A* 2cbt_A*
Probab=23.70 E-value=73 Score=27.11 Aligned_cols=35 Identities=11% Similarity=-0.001 Sum_probs=27.0
Q ss_pred CceEEEcccccccCCCcccEEEEEEecCCCCCCCEEEE
Q 007227 44 NAYIKASPSILGMKGQNSDWLTVEYNSPNPSVGDWIGV 81 (612)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~ 81 (612)
++.|++||+.= ..|+|.|+|+.+|-.|...=.++.
T Consensus 2 ap~isvsPatg---L~DGq~VtV~~tGl~p~~~y~v~~ 36 (113)
T 1noa_A 2 APTATVTPSSG---LSDGTVVKVAGAGLQAGTAYDVGQ 36 (113)
T ss_dssp CCEEEEESCSS---CCTTCEEEEEEESCCTTCEEEEEE
T ss_pred CCcEEecCCCC---CCCCCEEEEEEEccCCCCeEEEEE
Confidence 56899999864 346688999999988887655555
No 226
>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C
Probab=21.09 E-value=2.1e+02 Score=28.59 Aligned_cols=73 Identities=8% Similarity=-0.008 Sum_probs=40.3
Q ss_pred cCCCCCCcceeeecCCCCcEEEEEEeCCCCCCC---ccEEEEccCCCCCccccCcceEEeccccCCCCCccccccCCCeE
Q 007227 164 TNPNAPVYPRLAQGKVWNEMTVTWTSGYGINEA---EPFVEWGPKGGDRTYSPAGTLTFGRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 164 ~~~~~P~~~~La~~~~~~~m~V~W~T~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mc~~pa~~~g~~~~g~~ 240 (612)
.-|.+|....+... .+.+.|+|......-.. .-.|+|...+...... .... ...
T Consensus 219 Vkp~PP~nL~v~~~--~~~l~v~W~~P~~~~~~~~L~Yevryr~~~~~~~~~----~~~~-----------------~~~ 275 (317)
T 3qt2_A 219 DQINPPLNVTAEIE--GTRMSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQI----EKLM-----------------TNA 275 (317)
T ss_dssp BCCCCCEEEEEEEE--TTEEEEEEECCSSSSCGGGEEEEEEEEETTTCCEEE----EEES-----------------SSE
T ss_pred CcCCCCceeEEEEe--CCcEEEEECCCCcccccCceEEEEEEEeCCCCcceE----EEEe-----------------eeE
Confidence 36777876666544 37999999986421110 2345555432211100 0000 011
Q ss_pred EEEEecCCCCCCEEEEEEeeec
Q 007227 241 HTGFLRELWPNAMYTYKLGHRL 262 (612)
Q Consensus 241 h~a~l~gL~Pgt~Y~Yrv~~~~ 262 (612)
+ .+ .|.|+++|..||....
T Consensus 276 ~--~l-~l~p~~~Y~vqVR~k~ 294 (317)
T 3qt2_A 276 F--IS-IIDDLSKYDVQVRAAV 294 (317)
T ss_dssp E--EE-ECCTTCCEEEEEEEEE
T ss_pred E--Ee-ecCCCCEEEEEEEEee
Confidence 1 34 4999999999999874
No 227
>2mcm_A Macromomycin; apoprotein; 1.50A {Streptomyces macromomyceticus} SCOP: b.1.7.1
Probab=20.91 E-value=84 Score=26.69 Aligned_cols=35 Identities=17% Similarity=0.155 Sum_probs=26.5
Q ss_pred CceEEEcccccccCCCcccEEEEEEecCCCCCCCEEEE
Q 007227 44 NAYIKASPSILGMKGQNSDWLTVEYNSPNPSVGDWIGV 81 (612)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~ 81 (612)
++.|++||+.= ..|+|.|+|+.+|-.|...=.++.
T Consensus 1 ap~isvsPatg---L~DGq~VtV~~tGl~p~~~y~v~~ 35 (112)
T 2mcm_A 1 APGVTVTPATG---LSNGQTVTVSATGLTPGTVYHVGQ 35 (112)
T ss_dssp CCEEEEESCSS---BCTTEEEEEEEESCCTTCEEEEEE
T ss_pred CCceEecCCCC---CCCCCEEEEEEEccCCCCeEEEEE
Confidence 35789999864 346688999999988887655555
No 228
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=20.44 E-value=2.1e+02 Score=31.88 Aligned_cols=37 Identities=14% Similarity=-0.008 Sum_probs=25.3
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccc---eEEEEcCC
Q 007227 240 IHTGFLRELWPNAMYTYKLGHRLFNGTYIWSS---EYQFKASP 279 (612)
Q Consensus 240 ~h~a~l~gL~Pgt~Y~Yrv~~~~~~g~~~~S~---~~~F~T~p 279 (612)
.++|..++|.||+ |..+|.... ....|++ ...++-.|
T Consensus 709 ~~~~~ytnL~pG~-Y~f~V~a~~--~~g~w~~~~~~l~I~I~P 748 (758)
T 3ott_A 709 INRITYSNLSYGN-YQLIISKLE--RDGQPSNRPHILNIRILP 748 (758)
T ss_dssp CCEEEECSCCSEE-EEEEEEEBC--TTSCBCSSCEEEEEEECC
T ss_pred cceEEecCCCCcc-EEEEEEEeC--CCCCccCccEEEEEEECC
Confidence 4678999999986 888888763 3346774 34455444
Done!