Query 007232
Match_columns 612
No_of_seqs 296 out of 2066
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 20:34:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007232.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007232hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 4E-124 1E-128 1073.1 59.7 594 6-611 65-701 (967)
2 4fke_A Aminopeptidase N; zinc 100.0 2E-121 8E-126 1054.3 50.7 595 6-611 7-636 (909)
3 2xdt_A Endoplasmic reticulum a 100.0 7E-120 2E-124 1039.2 59.7 592 6-611 5-633 (897)
4 1z5h_A Tricorn protease intera 100.0 2E-112 5E-117 965.0 52.3 549 14-611 1-550 (780)
5 2gtq_A Aminopeptidase N; alani 100.0 2.9E-89 1E-93 777.7 49.2 567 5-612 8-614 (867)
6 3ebh_A PFA-M1, M1 family amino 100.0 2E-89 6.8E-94 771.0 44.4 517 11-555 11-559 (889)
7 3b34_A Aminopeptidase N; prote 100.0 8.3E-89 2.8E-93 771.3 44.2 536 4-579 30-595 (891)
8 3cia_A Cold-active aminopeptid 100.0 2.1E-84 7.2E-89 716.9 23.3 519 6-610 18-552 (605)
9 3u9w_A Leukotriene A-4 hydrola 100.0 5E-83 1.7E-87 706.3 28.9 450 6-476 5-474 (608)
10 2xq0_A LTA-4 hydrolase, leukot 100.0 6E-81 2E-85 691.2 22.4 519 6-610 20-580 (632)
11 4fgm_A Aminopeptidase N family 100.0 1.9E-29 6.3E-34 275.2 20.9 296 154-458 119-450 (597)
12 3rjo_A Endoplasmic reticulum a 100.0 9.1E-30 3.1E-34 269.5 16.0 145 456-611 1-150 (419)
13 1bqb_A Protein (aureolysin); h 86.1 2.4 8.2E-05 41.3 8.6 103 234-340 68-178 (301)
14 1u4g_A Elastase, pseudolysin; 84.3 31 0.0011 33.4 18.8 98 233-341 73-175 (301)
15 4ger_A Gentlyase metalloprotea 82.6 8.4 0.00029 37.4 10.7 102 232-341 62-170 (304)
16 3dnz_A Thermolysin; hydrolase, 82.1 2.8 9.6E-05 40.9 7.2 102 232-341 69-177 (316)
17 2y3u_A Collagenase, collagenas 79.5 0.78 2.7E-05 50.7 2.5 39 301-339 422-469 (785)
18 2vqx_A Metalloproteinase; ther 79.4 15 0.00053 36.2 11.5 105 232-341 89-197 (341)
19 3cqb_A Probable protease HTPX 77.8 4.5 0.00015 32.7 6.1 67 239-316 27-98 (107)
20 3nqx_A MCP-02, secreted metall 74.7 33 0.0011 33.2 12.1 99 233-341 74-176 (306)
21 3c37_A Peptidase, M48 family; 50.2 19 0.00064 34.1 5.3 19 298-316 97-115 (253)
22 1r55_A ADAM 33; metalloproteas 45.4 15 0.00051 33.7 3.7 14 300-313 135-148 (214)
23 1bud_A Protein (acutolysin A); 41.9 27 0.00091 31.5 4.7 13 301-313 133-145 (197)
24 1yp1_A FII; FII hydrolase; 1.9 41.8 25 0.00086 31.8 4.6 13 301-313 135-147 (202)
25 2ejq_A Hypothetical protein TT 41.5 9.9 0.00034 31.9 1.6 27 297-324 85-111 (130)
26 2w15_A Zinc metalloproteinase 41.4 28 0.00095 31.5 4.8 14 300-313 135-148 (202)
27 2ero_A VAP-1, vascular apoptos 36.1 36 0.0012 34.9 5.1 14 300-313 145-158 (427)
28 1atl_A Atrolysin C; metalloend 33.5 26 0.00089 31.7 3.2 13 301-313 136-148 (202)
29 3dte_A IRRE protein; radiotole 33.5 32 0.0011 33.4 4.0 31 433-463 164-194 (301)
30 3isy_A Bsupi, intracellular pr 32.7 2E+02 0.0069 23.4 9.1 26 87-112 81-106 (120)
31 1qua_A Acutolysin-C, hemorrhag 32.4 28 0.00095 31.4 3.2 13 301-313 135-147 (197)
32 2c9r_A COPC, copper resistance 31.7 1.5E+02 0.0051 23.3 7.0 22 85-107 64-85 (102)
33 1kuf_A Atrolysin E, metallopro 30.9 26 0.0009 31.7 2.8 14 300-313 137-150 (203)
34 3k7n_A K-like; SVMP, hydrolase 29.6 52 0.0018 33.3 5.0 14 300-313 138-151 (397)
35 1lyq_A PCOC copper resistance 29.3 1.6E+02 0.0055 23.2 6.9 22 85-107 66-87 (104)
36 2e3x_A Coagulation factor X-ac 27.9 25 0.00087 36.1 2.3 14 300-313 138-151 (427)
37 4fca_A Conserved domain protei 27.5 42 0.0014 35.4 3.9 57 396-452 318-379 (525)
38 3k7l_A Atragin; SVMP, metallop 27.3 52 0.0018 33.6 4.5 14 300-313 143-156 (422)
39 2dw0_A Catrocollastatin; apopt 26.8 34 0.0012 35.0 3.0 14 300-313 136-149 (419)
40 3c0t_B Mediator of RNA polymer 23.4 63 0.0021 18.7 2.3 21 566-586 3-23 (33)
41 3e11_A Predicted zincin-like m 23.0 49 0.0017 26.9 2.7 34 278-313 69-102 (114)
42 3lmc_A Peptidase, zinc-depende 21.9 2.4E+02 0.0083 25.5 7.3 21 293-313 135-155 (210)
43 3iuk_A Uncharacterized protein 21.6 1.3E+02 0.0044 31.9 6.4 54 406-459 495-554 (562)
44 2ddf_A ADAM 17; hydrolase; HET 21.0 42 0.0014 31.6 2.3 13 301-313 182-194 (257)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=4e-124 Score=1073.10 Aligned_cols=594 Identities=39% Similarity=0.688 Sum_probs=536.8
Q ss_pred CCCCCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECCcCEEEEEecCeeeeEEEeeeeccCCC--ccccceeEEEec
Q 007232 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS--KALEPTKVELVE 83 (612)
Q Consensus 6 ~~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~--~~~~~~~~~~~~ 83 (612)
+.+|||++++|.||+|+|++|+++.+|+|+|+|++++.++++.|+||+++|+|.++.+.+..+... .........++
T Consensus 65 ~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~- 143 (967)
T 3se6_A 65 QELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP- 143 (967)
T ss_dssp CCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG-
T ss_pred ccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec-
Confidence 468999999999999999999999999999999999999999999999999999999875321100 01111222333
Q ss_pred CceEEEEEeCCccCCc-eEEEEEEEEeeecCCCCceEEeeecc-CCeeeeeeeeccCcCCCCceeeecCCCCCeeEEEEE
Q 007232 84 ADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKIT 161 (612)
Q Consensus 84 ~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~~~~~~~~-~g~~~~~~~t~~~p~~ar~~fPc~Dep~~ka~f~l~ 161 (612)
.++.+.|.++++|++| .|+|+|.|+|.++++..|||++.|.+ +|..+++++|||||++||+||||||||.+||+|+|+
T Consensus 144 ~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~it 223 (967)
T 3se6_A 144 AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSIK 223 (967)
T ss_dssp GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEEE
T ss_pred CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEEE
Confidence 5678999999999999 89999999999999999999999976 788899999999999999999999999999999999
Q ss_pred EEeCCCCeEeecCccccee-ecCCeEEEEEecCCCcceeEEEEEEeeeeeeecccCCCeEEEEEEeCCchhhHHHHHHHH
Q 007232 162 LDVPSELVALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVA 240 (612)
Q Consensus 162 i~~p~~~~~isn~~~~~~~-~~~~~~~~~f~~t~~~s~yl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~~~ 240 (612)
|++|++|+|+|||++.++. ..+++++++|+.|+|||+|++||+||+|+.++..+.+|+++++|++|+..+.++++++.+
T Consensus 224 I~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~~ 303 (967)
T 3se6_A 224 IRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQAS 303 (967)
T ss_dssp EEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHHH
T ss_pred EEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHHH
Confidence 9999999999999987653 456789999999999999999999999999886667799999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcCCCCccEEEecCCCccchhcccceeeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCccCc
Q 007232 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 320 (612)
Q Consensus 241 ~~~l~~~e~~fg~~yP~~k~d~V~~p~~~~~ame~~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~ 320 (612)
.+++++||++||+|||++|+|+|++|+|..||||||||++|++..++++++.++...++.+..+||||+|||||||+|||
T Consensus 304 ~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT~ 383 (967)
T 3se6_A 304 LKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVTM 383 (967)
T ss_dssp HHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEEE
T ss_pred HHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCcccc
Confidence 99999999999999999999999999999999999999999999999999988888888899999999999999999999
Q ss_pred cccchhHHhhhHHHHHHHHHhhhcCCchhhHHHHHHHHHhhhcccccCCCCCceeecCCccccccccceeeeechhHHHH
Q 007232 321 EWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIR 400 (612)
Q Consensus 321 ~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~~~~~~~~~~~~~f~~i~Y~Kg~~vl~ 400 (612)
+||+|+|||||||+|++++++++.+|++.++..++.+...++..|+...++|+..++.++.++...|+.++|.||+++|+
T Consensus 384 ~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL~ 463 (967)
T 3se6_A 384 EWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACILN 463 (967)
T ss_dssp SSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHHH
T ss_pred CCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHHH
Confidence 99999999999999999999999999998877776665577888999999999999999999999999999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhc---------------------------cCCCHHHHHHHHhc
Q 007232 401 MLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWTK 453 (612)
Q Consensus 401 mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------~~~~l~~~~~~W~~ 453 (612)
||+..||++.|+++|+.|+++|+|++++++|||++++++ +|.++++||++|+.
T Consensus 464 mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~~ 543 (967)
T 3se6_A 464 MLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTL 543 (967)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHhc
Confidence 999999999999999999999999999999999999995 68899999999999
Q ss_pred CCCceEEEEEEeCcEEEEEEEEeecCCCC---------CCCeEEEEEEEEECcccceeeEEeeccceEEEeccccccccc
Q 007232 454 QKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSIS 524 (612)
Q Consensus 454 ~~g~P~l~v~~~~~~~~i~Q~~f~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (612)
|+|||+++|++++++++|+|+||+.++.. .+..|+|||+|.++++.....+|+..++.++.++.
T Consensus 544 q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------- 616 (967)
T 3se6_A 544 QKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------- 616 (967)
T ss_dssp SCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS-------
T ss_pred CCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC-------
Confidence 99999999999889999999999875422 23589999999887655445567776666666542
Q ss_pred CCCCCCceEEeccCceEEEEEEcCHHHHHHHHHHHHcC--CCChhhHHHHHHHHHHHHHhcCCCHHHHHHHHHhcCcCCC
Q 007232 525 KEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETE 602 (612)
Q Consensus 525 ~~~~~~~~i~~N~~~~gyyrV~Yd~~~w~~l~~~l~~~--~i~~~~r~~li~D~~~l~~~g~l~~~~~~~l~~~l~~e~~ 602 (612)
.+ +||++|.++.||||||||+++|++|+++|..+ .|++.+|||||+|+|+||++|+++++.+|++++||++|++
T Consensus 617 --~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~ 692 (967)
T 3se6_A 617 --KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHETS 692 (967)
T ss_dssp --CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCCC
T ss_pred --CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCc
Confidence 34 89999999999999999999999999999763 6999999999999999999999999999999999999999
Q ss_pred HhHHHHhhc
Q 007232 603 YTVLSNLIT 611 (612)
Q Consensus 603 ~~~w~~~~~ 611 (612)
|+||..+++
T Consensus 693 ~~~w~~a~~ 701 (967)
T 3se6_A 693 SPALLEGLS 701 (967)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998864
No 2
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=2.3e-121 Score=1054.33 Aligned_cols=595 Identities=39% Similarity=0.660 Sum_probs=525.4
Q ss_pred CCCCCCCCceeeeEEEEEEecCCC-----CeEEEEEEEEEEEECCcCEEEEEecCeeeeEEEe--eeeccCCCcccccee
Q 007232 6 GQPRLPKFAVPKRYDIRLTPDLTS-----CKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSV--SFTNKVSSKALEPTK 78 (612)
Q Consensus 6 ~~~rLp~~~~p~~Y~l~l~~d~~~-----~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i--~~~~~~~~~~~~~~~ 78 (612)
+++|||++++|.||+|+|++|++. .+|+|+|+|++++.++++.|+||+.+|+|..+.. ...............
T Consensus 7 ~~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~i~~~~~~~~~~~~~~~~~~~~~~ 86 (909)
T 4fke_A 7 NRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYTTQGHMVVLRGVGDSQVPEIDR 86 (909)
T ss_dssp GSSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCEECCSSSSCEEEESTTCCCCCEEE
T ss_pred ccccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCEEEeeeeEEEEecCCCcceecccc
Confidence 679999999999999999988653 5899999999999999999999999999976321 111111222334556
Q ss_pred EEEecCceEEEEEeCCccCCc-eEEEEEEEEeeecCCCCceEEeeeccCCeeeeeeeeccCcCCCCceeeecCCCCCeeE
Q 007232 79 VELVEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKAT 157 (612)
Q Consensus 79 ~~~~~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~~~~~~~~~g~~~~~~~t~~~p~~ar~~fPc~Dep~~ka~ 157 (612)
..++...+.++|.++++|++| .|+|+|.|+|+++++..|||++.|.++|..+++++|||||++||+||||||||.+||+
T Consensus 87 ~~~~~~~~~l~i~l~~~l~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~~~~~~~~Tqfep~~AR~~FPc~DeP~~KAt 166 (909)
T 4fke_A 87 TELVELTEYLVVHLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKAT 166 (909)
T ss_dssp EEEETTTTEEEEEEEEEECTTCEEEEEEEEEEECCSSSSEEEEEEEEETTEEEEEEEEECTTTTGGGTSCBCCSTTSCBE
T ss_pred eEEecCCcEEEEEcCCCcCCCCEEEEEEEEEEEECCCCeEEEEeeEEECCceEEEEEEcCcccCcCEEEEeCCccccceE
Confidence 778889999999999999999 8999999999999999999999998888889999999999999999999999999999
Q ss_pred EEEEEEeCCCCeEeecCcccceee----cCCeEEEEEecCCCcceeEEEEEEeeeeeeecccCCCeEEEEEEeCCchh--
Q 007232 158 FKITLDVPSELVALSNMPVIDEKV----DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKAN-- 231 (612)
Q Consensus 158 f~l~i~~p~~~~~isn~~~~~~~~----~~~~~~~~f~~t~~~s~yl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~-- 231 (612)
|+|+|++|++|+|+|||++.++.. ++++++++|+.+||||+|++||+||+|..++..+.+|+++++|++|+..+
T Consensus 167 f~i~i~~p~~~~alSN~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~~~~~~ 246 (909)
T 4fke_A 167 FNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNAIAEG 246 (909)
T ss_dssp EEEEEEEETTSEEEESSCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHHHHHTT
T ss_pred EEEEEEECCCCEEEcCCcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecchhhhh
Confidence 999999999999999999876532 46789999999999999999999999999887778899999999998654
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcCCCCccEEEecCCCccchhcccceeeecccccccCCCChHHHHHHHHHHHHHHHHH
Q 007232 232 QGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAH 311 (612)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yP~~k~d~V~~p~~~~~ame~~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaH 311 (612)
.++++++.+.+++++||++||+|||++|+|+|++|+|..||||||||++|++..+|++++.++...++.++.+||||+||
T Consensus 247 ~~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~viaHElAH 326 (909)
T 4fke_A 247 HGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAHELAH 326 (909)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHhccCCCCCCcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHHHHHHh
Confidence 45699999999999999999999999999999999999999999999999999999999988888999999999999999
Q ss_pred HHhcCccCccccchhHHhhhHHHHHHHHHhhhcCCchhhHHHHHHHHH-hhhcccccCCCCCceee---cCCcccccccc
Q 007232 312 QWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVE---VNHTGEIDEIF 387 (612)
Q Consensus 312 qWfGnlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pl~~~---~~~~~~~~~~f 387 (612)
|||||+|||+||+|+|||||||+|++++++++.+|++.++..|..+.. .++..|+...++|+..+ +.++.+++..|
T Consensus 327 qWFGnlVT~~~W~dlWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~~~~v~~~~~i~~~f 406 (909)
T 4fke_A 327 QWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQISEMF 406 (909)
T ss_dssp TTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCCGGGCCSHHHHHTTS
T ss_pred hhhcCeecccccCcceeehHHHHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCccccccccCChhhHHhhh
Confidence 999999999999999999999999999999999999999888877665 66888999999999875 56778889999
Q ss_pred ceeeeechhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCC--------CHHHHHHHHhcCCCceE
Q 007232 388 DAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE--------PVNKLMNSWTKQKGYPV 459 (612)
Q Consensus 388 ~~i~Y~Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~--------~l~~~~~~W~~~~g~P~ 459 (612)
+.++|.||++|||||+..||++.|+++|+.|+++|+|++++++|||++|++++|+ ++++||++|+.|+|||+
T Consensus 407 d~i~Y~KGa~vL~mL~~~lG~e~F~~gl~~Yl~~~~~~na~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~W~~q~G~Pv 486 (909)
T 4fke_A 407 DSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQMGFPV 486 (909)
T ss_dssp SHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHHHHSSCSCEE
T ss_pred hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcccccccchhHHhHhhCccccCCCcE
Confidence 9999999999999999999999999999999999999999999999999999864 59999999999999999
Q ss_pred EEEEEeCcEEEEEEEEeecCCCC-------CCCeEEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCCCce
Q 007232 460 ISVKVKEEKLELEQSQFLSSGSP-------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGW 532 (612)
Q Consensus 460 l~v~~~~~~~~i~Q~~f~~~~~~-------~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (612)
|+|+++.+. ++|+||+..... .+..|+|||++.+........++.........+.. ...+ +|
T Consensus 487 v~V~~~~~~--~~q~~~~~~~~~~~~~~~~~~~~w~IPl~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~--~w 555 (909)
T 4fke_A 487 ITVDTKTGN--ISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDHYWLRDVSQAQNDLFK-------TASD--DW 555 (909)
T ss_dssp EEEETTTTE--EEEEECCSCTTCCCCSCCTTTTCCCEEECEEETTEECCCEEECSCSEEECGGGC-------CCTT--CC
T ss_pred EEEEeccCc--EEEEEEEeccCCCCCCCCCCCceEEEEEEEEeCCCccceEEeeccccceeeecc-------CCCC--Ce
Confidence 999877765 677888764321 23479999999876543322222222222222221 2344 89
Q ss_pred EEeccCceEEEEEEcCHHHHHHHHHHHHcC--CCChhhHHHHHHHHHHHHHhcCCCHHHHHHHHHhcCcCCCHhHHHHhh
Q 007232 533 IKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLI 610 (612)
Q Consensus 533 i~~N~~~~gyyrV~Yd~~~w~~l~~~l~~~--~i~~~~r~~li~D~~~l~~~g~l~~~~~~~l~~~l~~e~~~~~w~~~~ 610 (612)
|++|.++.|||||+||+++|.+|+++|..+ .|++.+|||||+|+|+||++|.++++.+|+++.||++|++|+||..++
T Consensus 556 i~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag~~~~~~~l~l~~~l~~E~~y~~w~~~~ 635 (909)
T 4fke_A 556 VLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKEYMPWQAAL 635 (909)
T ss_dssp EEESGGGCSSCEEEECHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHTTGGGGGCCSHHHHHHHH
T ss_pred EEECCCceEEEEEecCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCccHHHHHHHH
Confidence 999999999999999999999999999865 799999999999999999999999999999999999999999999986
Q ss_pred c
Q 007232 611 T 611 (612)
Q Consensus 611 ~ 611 (612)
+
T Consensus 636 ~ 636 (909)
T 4fke_A 636 S 636 (909)
T ss_dssp H
T ss_pred H
Confidence 4
No 3
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=7.3e-120 Score=1039.24 Aligned_cols=592 Identities=38% Similarity=0.689 Sum_probs=537.0
Q ss_pred CCCCCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECCcCEEEEEecCeeeeEEEeeeeccCCCccc--cceeEEEec
Q 007232 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKAL--EPTKVELVE 83 (612)
Q Consensus 6 ~~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~--~~~~~~~~~ 83 (612)
+++|||+.++|.||+|+|++|+++.+|+|+++|++++.++++.|+||+.+|+|.++.+.+.++ ..+ ....+..+.
T Consensus 5 ~~~rLp~~~~p~hY~l~L~~d~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~v~~~~~---~~~~~~~~~~~~~~ 81 (897)
T 2xdt_A 5 NKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAG---ERLSEEPLQVLEHP 81 (897)
T ss_dssp CCSSCCSSEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCEEEEEEECSSCEEEEEEEEEC-------CEEEECEEEEET
T ss_pred ccCcCCCCcEeeEEEEEEEEecCCCeEEEEEEEEEEEEcCCCEEEEEeCCCEEEEEEEEecCC---cccccccceeEEcC
Confidence 568999999999999999999999999999999999988899999999999999999875311 112 233455667
Q ss_pred CceEEEEEeCCccCCc-eEEEEEEEEeeecCCCCceEEeeecc-CCeeeeeeeeccCcCCCCceeeecCCCCCeeEEEEE
Q 007232 84 ADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKIT 161 (612)
Q Consensus 84 ~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~~~~~~~~-~g~~~~~~~t~~~p~~ar~~fPc~Dep~~ka~f~l~ 161 (612)
.++.++|.++++|++| .++|+|.|+|.++++..|||++.|.+ +|..+++++|||||.+||+||||||+|++||+|+++
T Consensus 82 ~~~~l~i~l~~~L~~g~~~~L~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~it 161 (897)
T 2xdt_A 82 RQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSIK 161 (897)
T ss_dssp TTTEEEEEEEEEECTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTHHHHSCBCCSTTSCBEEEEE
T ss_pred CCcEEEEEeCCccCCCCEEEEEEEEEEEeCCCCceeEeeeeecCCCceeEEEEecceecccceEEeccCCccccCeEEEE
Confidence 7889999999999999 79999999999998889999999865 688888999999999999999999999999999999
Q ss_pred EEeCCCCeEeecCccccee-ecCCeEEEEEecCCCcceeEEEEEEeeeeeeecccCCCeEEEEEEeCCchhhHHHHHHHH
Q 007232 162 LDVPSELVALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVA 240 (612)
Q Consensus 162 i~~p~~~~~isn~~~~~~~-~~~~~~~~~f~~t~~~s~yl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~~~ 240 (612)
|++|++|+|+|||++.++. ..+++++++|+.++|||+|++||+||+|+.++..+.+|+++++|++|+..+.++++++.+
T Consensus 162 I~~p~~~~alSN~~~~~~~~~~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~~~ 241 (897)
T 2xdt_A 162 IRREPRHLAISNMPLVKSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDAA 241 (897)
T ss_dssp EEECTTCEEEESSCEEEEEEEETTEEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCHHHHHHH
T ss_pred EEEcCCceEecCCCccceEecCCCEEEEEEeCCCccchhheEEEEEcceeeccccCCCeeEEEEcCCChHHHHHHHHHHH
Confidence 9999999999999987653 456789999999999999999999999999886567789999999999998999999999
Q ss_pred HHHHHHHHHHhCCCcCCCCccEEEecCCCccchhcccceeeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCccCc
Q 007232 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 320 (612)
Q Consensus 241 ~~~l~~~e~~fg~~yP~~k~d~V~~p~~~~~ame~~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~ 320 (612)
.+++++|+++||+|||++|+|+|++|+|..||||||||++|++..++++++.++...++.+..+||||+|||||||+|||
T Consensus 242 ~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlVT~ 321 (897)
T 2xdt_A 242 VTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVTM 321 (897)
T ss_dssp HHHHHHHHHHTTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEEE
T ss_pred HHHHHHHHHHhCCCCCccceeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEecc
Confidence 99999999999999999999999999999999999999999999999999988888888999999999999999999999
Q ss_pred cccchhHHhhhHHHHHHHHHhhhcCCchhhHHHHHHHHHhhhcccccCCCCCceeecCCccccccccceeeeechhHHHH
Q 007232 321 EWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIR 400 (612)
Q Consensus 321 ~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~~~~~~~~~~~~~f~~i~Y~Kg~~vl~ 400 (612)
+||+|+|||||||+|++++++++.+|++.++..|..+...++..|+...+||+..++.++.++...|+.++|.||++||+
T Consensus 322 ~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f~~~~~~a~~~D~~~~~~Pi~~~v~~p~~i~~~fd~i~Y~KGa~vl~ 401 (897)
T 2xdt_A 322 EWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKGACILN 401 (897)
T ss_dssp SSGGGTHHHHHHHHHHHHHHHHHHCGGGCGGGGHHHHHHHHHHHHTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHHH
T ss_pred CCcchhhhhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhcccCCCCCEEeCCCHHHHHHhcchhhhhhHHHHHH
Confidence 99999999999999999999999999998888885555577888999999999988888988999999999999999999
Q ss_pred HHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhc-------------------c--------CCCHHHHHHHHhc
Q 007232 401 MLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG-------------------S--------GEPVNKLMNSWTK 453 (612)
Q Consensus 401 mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~-------------------~--------~~~l~~~~~~W~~ 453 (612)
||+..||++.|+++|+.|+++|+|++++++|||++++++ + |.++++||++|++
T Consensus 402 mL~~~lG~e~F~~gl~~Yl~~~~~~~a~~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~~ 481 (897)
T 2xdt_A 402 MLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTDGVKGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWTL 481 (897)
T ss_dssp HHHHHSCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTC----------------------------CCCHHHHHHHHHS
T ss_pred HHHHHhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCHHHHHHHhhc
Confidence 999999999999999999999999999999999999996 5 8999999999999
Q ss_pred CCCceEEEEEEeCcEEEEEEEEeecCCCC---CCCeEEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCCC
Q 007232 454 QKGYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNG 530 (612)
Q Consensus 454 ~~g~P~l~v~~~~~~~~i~Q~~f~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 530 (612)
|+|+|+++|++++++++|+|+||+.++.. ....|+|||+|.++++......|+..++.++.++ ..+
T Consensus 482 q~G~P~l~v~~~~~~~~l~Q~~f~~~~~~~~~~~~~w~iPi~~~~~~~~~~~~~~l~~~~~~~~~~---------~~~-- 550 (897)
T 2xdt_A 482 QKGFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILP---------EEV-- 550 (897)
T ss_dssp SCSEEEEEEEEETTEEEEEEEEECCC-----CCCCCCCEEEEEEESSCSSCEEEEECSSEEEEECS---------SCC--
T ss_pred CCCceEEEEEEcCCEEEEEEEEeecCCCCCCCCCceEEEEEEEEeCCCCccceEEecCCceEEEcc---------CCC--
Confidence 99999999999988999999999876432 2458999999987655444567887766666553 234
Q ss_pred ceEEeccCceEEEEEEcCHHHHHHHHHHHHcC--CCChhhHHHHHHHHHHHHHhcCCCHHHHHHHHHhcCcCCCHhHHHH
Q 007232 531 GWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSN 608 (612)
Q Consensus 531 ~~i~~N~~~~gyyrV~Yd~~~w~~l~~~l~~~--~i~~~~r~~li~D~~~l~~~g~l~~~~~~~l~~~l~~e~~~~~w~~ 608 (612)
+||++|.++.|||||+||+++|++|+++|..+ .|++.+|||||+|+|+|+++|+++++.+|+|++||++|++|+||.+
T Consensus 551 ~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~~~~w~~ 630 (897)
T 2xdt_A 551 EWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQ 630 (897)
T ss_dssp SCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTTSSCHHHHHHHHGGGGGCCCHHHHHH
T ss_pred ceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcHHHHHH
Confidence 89999999999999999999999999999754 6999999999999999999999999999999999999999999999
Q ss_pred hhc
Q 007232 609 LIT 611 (612)
Q Consensus 609 ~~~ 611 (612)
+++
T Consensus 631 ~~~ 633 (897)
T 2xdt_A 631 GLN 633 (897)
T ss_dssp HHH
T ss_pred HHH
Confidence 864
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=1.6e-112 Score=965.04 Aligned_cols=549 Identities=38% Similarity=0.692 Sum_probs=495.3
Q ss_pred ceeeeEEEEEEecCCCCeEEEEEEEEEEEECCcCEEEEEecCeeeeEEEeeeeccCCCccccceeEEEecCceEEEEEeC
Q 007232 14 AVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFA 93 (612)
Q Consensus 14 ~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~ 93 (612)
|+|.||+|+|++++++.+|+|+|+| + ++++.|+||+.+|+|.+|.+++. ...+.++. +.++|.++
T Consensus 1 v~p~hY~l~l~~~~~~~~f~G~v~I--~--~~~~~i~L~~~~l~I~~v~~~g~---------~~~~~~~~--~~l~i~~~ 65 (780)
T 1z5h_A 1 MEVEKYDLTLDFDIQKRTFNGTETI--T--ADAGDIVLDAVGLQINWMKVNGR---------DTAFTYDG--QTVRAPGD 65 (780)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEE--E--ECSSCEEEECSSCEEEEEEETTE---------ECCCEECS--SEEEECCC
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEE--E--cCCCEEEEEccCCEEEEEEEece---------eccEEEEC--CEEEEEeC
Confidence 5799999999999999999999999 4 66899999999999999998642 22334433 37777765
Q ss_pred CccCCceEEEEEEEEeeecCCCCceEEeeeccCCeeeeeeeeccCcCCCCceeeecCCCCCeeEEEEEEEeCCCCeEeec
Q 007232 94 ETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSN 173 (612)
Q Consensus 94 ~~l~~g~~~l~i~y~g~~~~~~~G~~~~~~~~~g~~~~~~~t~~~p~~ar~~fPc~Dep~~ka~f~l~i~~p~~~~~isn 173 (612)
+|.++|+|.|+|.++++..|+|++.|. +++++|||||.+||+||||||+|.+||+|+++|++|++|+|+||
T Consensus 66 ----~g~~~l~i~y~g~~~~~~~G~y~~~y~-----~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lSN 136 (780)
T 1z5h_A 66 ----SQPQKIEISFAGKVSDSLSGIYYAGRE-----NGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISN 136 (780)
T ss_dssp ----SSSEEEEEEEEEECBSSSSEEEEESST-----TCEEEEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEES
T ss_pred ----CccEEEEEEEEEEeCCCcccceecccc-----ceEEEEccccCChhheeecCCCcccccEEEEEEEECCCCEEEeC
Confidence 378999999999999888999999875 57889999999999999999999999999999999999999999
Q ss_pred CcccceeecCCeEEEEEecCCCcceeEEEEEEeeeeeeecccCCCeEEEEEEeCCchhhHHHHHHHHHHHHHHHHHHhCC
Q 007232 174 MPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAV 253 (612)
Q Consensus 174 ~~~~~~~~~~~~~~~~f~~t~~~s~yl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~~~~~~l~~~e~~fg~ 253 (612)
|++.++ ..+++++++|+.++|||+|++||++|+|+.++..+. |+++++|++|+ +.++++++.+.+++++|+++||+
T Consensus 137 ~~~~~~-~~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~~-gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg~ 212 (780)
T 1z5h_A 137 MPPKRI-EVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYR-DIDLILASLKD--IRSKYPLDMARKSVEFYENYFGI 212 (780)
T ss_dssp SCEEEE-EESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEET-TEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHSS
T ss_pred Cccccc-cCCCceEEEEecCCcccceEEEEEEeccEEEeeccC-CeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhCC
Confidence 998765 556788999999999999999999999999885544 89999999998 66789999999999999999999
Q ss_pred CcCCCCccEEEecCCCccchhcccceeeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCccCccccchhHHhhhHH
Q 007232 254 PYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFA 333 (612)
Q Consensus 254 ~yP~~k~d~V~~p~~~~~ame~~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~~~w~d~WL~EGfA 333 (612)
|||++|+|+|++|+|..|||||||+++|++..++++ +.++...++.+..+||||+|||||||+|||+||+|+|||||||
T Consensus 213 ~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~-~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfA 291 (780)
T 1z5h_A 213 PYALPKMHLISVPEFGAGAMENWGAITFREIYMDIA-ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFA 291 (780)
T ss_dssp CCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHSCC-TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHH
T ss_pred CCCCccCCEEEcCCCCCCcccccCeeEeecceEeec-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCcccccccHHHH
Confidence 999999999999999999999999999999989998 6677778888999999999999999999999999999999999
Q ss_pred HHHHHHHhhhcCCchhhHHHHHHHHH-hhhcccccCCCCCceeecCCccccccccceeeeechhHHHHHHHHhhCHHHHH
Q 007232 334 TWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQ 412 (612)
Q Consensus 334 ~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pl~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~ 412 (612)
+|++++++++.+|++.++.+|..+.. .++..|+...+||+..++.++.++...|+.++|.||++|++||+..||++.|+
T Consensus 292 ~y~~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~~~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~ 371 (780)
T 1z5h_A 292 TFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFR 371 (780)
T ss_dssp HHHHHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHH
Confidence 99999999999999998888876655 56788999999999988888888889999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHHHHHHhcCCCceEEEEEEeCcEEEEEEEEeecCCCCCCCeEEEEEE
Q 007232 413 RSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPIT 492 (612)
Q Consensus 413 ~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~l~v~~~~~~~~i~Q~~f~~~~~~~~~~w~iPl~ 492 (612)
++|+.|+++|++++++++|||+++++++|.++++||++|++|+|+|+++|++++++++|+|+||..++ .....|+|||+
T Consensus 372 ~~l~~yl~~~~~~~~t~~Dl~~~l~~~sg~dl~~~~~~W~~~~G~P~l~v~~~~~~~~l~Q~~f~~~~-~~~~~w~iPi~ 450 (780)
T 1z5h_A 372 KGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNG-EEEGRWPVPVN 450 (780)
T ss_dssp HHHHHHHHHHTTEEECHHHHHHHHHHHHCSCHHHHHHHHHHSCSCEEEEEEESSSEEEEEEEECCSSC-CEECCCCEEEE
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHhCCCHHHHHHHHHhCCCCceEEEEecCcEEEEEEEEecCCC-CCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999998889999999998765 33458999999
Q ss_pred EEECcccceeeEEeeccceEEEecccccccccCCCCCCceEEeccCceEEEEEEcCHHHHHHHHHHHHcCCCChhhHHHH
Q 007232 493 LCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI 572 (612)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~~~gyyrV~Yd~~~w~~l~~~l~~~~i~~~~r~~l 572 (612)
+ ++++. .... +.++ ++.++. + +||++|.++.|||||+||+++|++|+++|. .|++.+||||
T Consensus 451 ~-~~~~~-~~~~-l~~~--~~~~~~----------~--~~i~~N~~~~gyyrv~Yd~~~~~~l~~~l~--~i~~~~Ra~l 511 (780)
T 1z5h_A 451 I-KKKDG-VERI-LLED--EASIEA----------D--GLIKINADSAGFYRVLYDDATFSDVMGHYR--DLSPLDRIGL 511 (780)
T ss_dssp E-EETTE-EEEE-EECS--SEEEEC----------T--TEEEESGGGCSSSEEECCHHHHHHHHHTGG--GCCHHHHHHH
T ss_pred E-cCCCc-eeee-ccCc--eEEccC----------C--ceEEEeCCCCEEEEEECCHHHHHHHHHHhc--cCCHHHHHHH
Confidence 9 44332 2334 5543 345542 2 799999999999999999999999999983 5899999999
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHhcCcCCCHhHHHHhhc
Q 007232 573 LDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLIT 611 (612)
Q Consensus 573 i~D~~~l~~~g~l~~~~~~~l~~~l~~e~~~~~w~~~~~ 611 (612)
|+|+|+|+++|+++++.+++|+.||++|++|+||..+++
T Consensus 512 i~D~~~l~~~g~~~~~~~l~l~~~l~~E~~~~~w~~~~~ 550 (780)
T 1z5h_A 512 VDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVG 550 (780)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHGGGTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 999999999999999999999999999999999999864
No 5
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=2.9e-89 Score=777.73 Aligned_cols=567 Identities=19% Similarity=0.286 Sum_probs=464.1
Q ss_pred CCCCCCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECCcCEEEEEecCeeeeEEEeeeeccCCCccccceeEEEecC
Q 007232 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEA 84 (612)
Q Consensus 5 ~~~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~~ 84 (612)
.+++|+|...+| ||+|+++++++..+++|+++|++. .+++.|+||+.+ +|.+|++++. . ..+..+
T Consensus 8 l~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~--~~~~~i~Ld~~~-~I~sv~v~g~---------~--~~~~~~ 72 (867)
T 2gtq_A 8 LKDYQTPAYHIL-KTDLHFDINEPQTVVKSRLTVEPQ--RVGEPLVLDGSA-KLLSVKINGA---------A--ADYVLE 72 (867)
T ss_dssp GGGCCCCSEEEE-EEEEEEEECSSCEEEEEEEEEEES--STTSCEEEECCS-EEEEEEETTE---------E--CCCEEE
T ss_pred ccccCCCCCcee-EEEEEEEEECCcEEEEEEEEEEEe--CCCCEEEEecCC-CEEEEEECCe---------e--cceEee
Confidence 367888876666 899999999988888887777653 447889999999 9999998642 1 233334
Q ss_pred ceEEEEEeCCccCCceEEEEEEEEeee--cCCCCceEEeeeccCCeeeeeeeeccCcCCCCceeeecCCCCCeeEEEEEE
Q 007232 85 DEILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITL 162 (612)
Q Consensus 85 ~~~l~i~l~~~l~~g~~~l~i~y~g~~--~~~~~G~~~~~~~~~g~~~~~~~t~~~p~~ar~~fPc~Dep~~ka~f~l~i 162 (612)
++.|+|. +|++|.++|+|.|++.. ++...|+|++. .+++|||||.+||+||||||+|..||+|+++|
T Consensus 73 ~~~L~I~---~lp~g~~~l~I~y~~~p~~~~~~~Gly~s~--------~~~~Tq~ep~~AR~~fPc~DeP~~katf~itI 141 (867)
T 2gtq_A 73 GETLTIA---GVPSERFTVEVETEILPAENKSLMGLYASG--------GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTI 141 (867)
T ss_dssp TTEEEES---CCCSSCEEEEEEEEECGGGCCSCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCBEEEEEE
T ss_pred CCEEEEE---ecCCCcEEEEEEEEEeccCCCCCcEEEEEC--------CEEEEeeccCCCceeeccCCCCCcceEEEEEE
Confidence 5677775 45568999999999864 34567999874 26789999999999999999999999999999
Q ss_pred EeCCC-C-eEeecCcccceee-cCCeEEEEEecCCCcceeEEEEEEeeeeeeecc--c--CCCeEEEEEEeCCchhhHHH
Q 007232 163 DVPSE-L-VALSNMPVIDEKV-DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--T--SDGIKVRVYCQVGKANQGKF 235 (612)
Q Consensus 163 ~~p~~-~-~~isn~~~~~~~~-~~~~~~~~f~~t~~~s~yl~a~~vg~f~~~~~~--~--~~~~~v~v~~~~~~~~~~~~ 235 (612)
++|++ | +++|||++.++.. .+++++++|+.++|||+|++||++|+|..++.. + ..++++++|++|+..+.+++
T Consensus 142 t~p~~~y~~~lSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~ 221 (867)
T 2gtq_A 142 VADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGF 221 (867)
T ss_dssp EEETTTCCEEEESSEEEEEEECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHH
T ss_pred EEccccceEEEeCCccccceeecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccccHHHHHH
Confidence 99997 6 8999999877543 567889999999999999999999999988742 2 23589999999999988999
Q ss_pred HHHHHHHHHHHHHHHhCCCcCCCCccEEEecCCCccchhcccceeeecccccccCCCChHHHHHHHHHHHHHHHHHHHhc
Q 007232 236 ALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 315 (612)
Q Consensus 236 ~l~~~~~~l~~~e~~fg~~yP~~k~d~V~~p~~~~~ame~~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfG 315 (612)
+++.+.+++++||++||+|||++|+++|++|+|..||||||||++|++..++++++.++...++.+..+||||+||||||
T Consensus 222 al~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfG 301 (867)
T 2gtq_A 222 AVESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTG 301 (867)
T ss_dssp HHHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBT
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999887777777778899999999999999
Q ss_pred CccCccccchhHHhhhHHHHHHHHHhhhcCCch-hhHHHHHHHHH-hhhcccccCCCCCceeecCCccccccccceeeee
Q 007232 316 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYR 393 (612)
Q Consensus 316 nlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~d~~~~~~pl~~~~~~~~~~~~~f~~i~Y~ 393 (612)
|+|||+||+++|||||||+|++..+.....+.. ..+.. ..... .++..|+...+||+.. .++.+++..|+.++|.
T Consensus 302 nlVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~~-~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~ 378 (867)
T 2gtq_A 302 NRVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIEN-IRLLRQHQFPEDAGPTAHPVRP--ASYEEMNNFYTMTVYE 378 (867)
T ss_dssp TTBEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHSTTCCCSSC--SEESCGGGGCSHHHHH
T ss_pred cEEEecccccccchHHHHHHHHHHHHHHHcCHHHHHHHH-HHHHHHHhhhhccCccCCCCcC--CChhhhhhhccchhhh
Confidence 999999999999999999999988887766532 11111 11111 2355677778899864 2345677889999999
Q ss_pred chhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHHHHHHhcCCCceEEEEEEe--Cc--EE
Q 007232 394 KGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVK--EE--KL 469 (612)
Q Consensus 394 Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~l~v~~~--~~--~~ 469 (612)
||++|++||+..||++.|+++|+.|+++|++++++++|||+++++++|.|+.+| ++|++|+|+|+++|++. .+ ++
T Consensus 379 KGa~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~~t~~Df~~~l~~~sg~dl~~f-~~W~~q~G~P~l~v~~~~~~~~~~l 457 (867)
T 2gtq_A 379 KGAEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQF-ALWYSQAGTPVLEAEGRLKNNIFEL 457 (867)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHTCCCGGG-GHHHHCCSCCEEEEEEEEETTEEEE
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCCHHHH-HHHhcCCCCceEEEEEEecCCEEEE
Confidence 999999999999999999999999999999999999999999999999999996 79999999999999975 34 48
Q ss_pred EEEEEEeecCCCCCCCeEEEEEEEEECc--ccc-----------eeeEEeeccceEEEecccccccccCCCCCCceEEec
Q 007232 470 ELEQSQFLSSGSPGDGQWIVPITLCCGS--YDV-----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLN 536 (612)
Q Consensus 470 ~i~Q~~f~~~~~~~~~~w~iPl~~~~~~--~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N 536 (612)
+|+|+++...+..+...|.|||++...+ +.. ...+++++++.++.++.+ ... .|+.+|
T Consensus 458 ~l~Q~~~~~~~~~~~~~~~iPi~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~--p~~~l~ 528 (867)
T 2gtq_A 458 TVKQTVPPTPDMTDKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGV-------TEA--VVPSLL 528 (867)
T ss_dssp EEEEECCCBTTBSCCCCCCEEEEEEEECTTCCBCCEECSSCEESCEEEEECSSEEEEEEBCC-------CSC--CEEEES
T ss_pred EEEEecCCCCCCCCCceEEEEEEEEEEcCCCcccccccccccccceEEEEcCCceEEEEeCC-------CCC--CceEec
Confidence 8999997644444456899999997542 221 123567777888888742 223 689999
Q ss_pred cCceEEEEEEcCHHHHHHHHHHHHcCCCChhhHHHH---HHHHHHH-----HHhcCC-C-HHHHHHHHHhcC-cCC-CHh
Q 007232 537 VNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI---LDDHFAL-----CMARQQ-T-LTSLLTLMASYS-EET-EYT 604 (612)
Q Consensus 537 ~~~~gyyrV~Yd~~~w~~l~~~l~~~~i~~~~r~~l---i~D~~~l-----~~~g~l-~-~~~~~~l~~~l~-~e~-~~~ 604 (612)
.+..+++||+|+...+.. +..+..+ -++.+|.+. |.|...+ +.+|.. + +..+++++.++. +|+ ++.
T Consensus 529 r~fs~~~~l~~~~~~~~l-~~l~~~~-~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 606 (867)
T 2gtq_A 529 RGFSAPVHLNYPYSDDDL-LLLLAHD-SDAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLLDNA 606 (867)
T ss_dssp TTCCSSCEEECCCCHHHH-HHHHHHC-SCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCHH
T ss_pred CCCCccEEEECCCCHHHH-HHHHhhC-CChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCCCHH
Confidence 999999999987655543 2333322 247888666 8888887 667766 6 888999999865 777 999
Q ss_pred HHHHhhcC
Q 007232 605 VLSNLITL 612 (612)
Q Consensus 605 ~w~~~~~~ 612 (612)
+|..+++|
T Consensus 607 ~~a~~l~l 614 (867)
T 2gtq_A 607 FKALLLGV 614 (867)
T ss_dssp HHHHHTCC
T ss_pred HHHHHhcC
Confidence 99998874
No 6
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=2e-89 Score=771.02 Aligned_cols=517 Identities=23% Similarity=0.322 Sum_probs=429.0
Q ss_pred CCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECCcCEEEEEecCeeeeEEEeeeeccCCCccccceeEEEecCceEEEE
Q 007232 11 PKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVL 90 (612)
Q Consensus 11 p~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~~~~~l~i 90 (612)
|..+...||+|+++++++...++|+++|++....+++.|+||+.+|+|.+|.+++.. +. ....+...++.|+|
T Consensus 11 ~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG~~------l~-~~~~~~~~~~~L~I 83 (889)
T 3ebh_A 11 PSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINNKK------LV-EGEEYTYDNEFLTI 83 (889)
T ss_dssp CCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETTEE------CC-BTTTEEECSSEEEE
T ss_pred CCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECCEE------cC-cccceEecCCEEEE
Confidence 556888999999999999999999999998866667899999999999999996531 11 00024455778999
Q ss_pred EeCCccCCceEEEEEEEEeee--cCCCCceEEeeeccCCeeeeeeeeccCcCCCCceeeecCCCCCeeEEEEEEEeCCC-
Q 007232 91 EFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSE- 167 (612)
Q Consensus 91 ~l~~~l~~g~~~l~i~y~g~~--~~~~~G~~~~~~~~~g~~~~~~~t~~~p~~ar~~fPc~Dep~~ka~f~l~i~~p~~- 167 (612)
.++. ++.+.++|+|.|++.. ++...|+|++. .+++|||||.+||+||||||+|++||+|+++|++|++
T Consensus 84 ~l~~-l~~~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~ 154 (889)
T 3ebh_A 84 FSKF-VPKSKFAFSSEVIIHPETNYALTGLYKSK--------NIIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEK 154 (889)
T ss_dssp CGGG-SCSSSEEEEEEEEECGGGCTTCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTT
T ss_pred ecCC-CCCCcEEEEEEEEecCccCCCceeeEEEC--------CeEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEcccc
Confidence 8775 6546999999999985 34567999874 2689999999999999999999999999999999997
Q ss_pred C-eEeecCccccee-ecCCeEEEEEecCCCcceeEEEEEEeeeeeeecc-----cCCCeEEEEEEeCCchhhHHHHHHHH
Q 007232 168 L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH-----TSDGIKVRVYCQVGKANQGKFALNVA 240 (612)
Q Consensus 168 ~-~~isn~~~~~~~-~~~~~~~~~f~~t~~~s~yl~a~~vg~f~~~~~~-----~~~~~~v~v~~~~~~~~~~~~~l~~~ 240 (612)
| +++|||++.++. ..+++++++|..++|||+|++||+||+|..++.. ...++++++|++|+..+.++++++.+
T Consensus 155 ~~valSNg~l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~ 234 (889)
T 3ebh_A 155 YPVLLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECL 234 (889)
T ss_dssp CCEEEESSEEEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHH
T ss_pred CeEEEccCccccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHH
Confidence 8 579999987764 4567889999999999999999999999988743 22348899999999999999999999
Q ss_pred HHHHHHHHHHhCCCcCCCCccEEEecCCCccchhcccceeeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCccCc
Q 007232 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 320 (612)
Q Consensus 241 ~~~l~~~e~~fg~~yP~~k~d~V~~p~~~~~ame~~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlVt~ 320 (612)
++++++||++||+|||++|+++|++|+|..||||||||++|++..+++++..++...++.+..+||||+|||||||+|||
T Consensus 235 ~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~ 314 (889)
T 3ebh_A 235 KKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTL 314 (889)
T ss_dssp HHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEE
T ss_pred HHHHHHHHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeee
Confidence 99999999999999999999999999999999999999999999999988876667777889999999999999999999
Q ss_pred cccchhHHhhhHHHHHHHHHhhhcCCchh-hHHHHHHHHHhhhcccccCCCCCceeecCCccccccccceeeeechhHHH
Q 007232 321 EWWTHLWLNEGFATWVSYLAADSLFPEWK-IWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (612)
Q Consensus 321 ~~w~d~WL~EGfA~y~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~pl~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (612)
+||+|+|||||||+|++.++.....+... .+.........++..|....+||+.. ..+.+++..|+.++|.||++||
T Consensus 315 ~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~--~~~~ei~~~f~~i~Y~KGa~vL 392 (889)
T 3ebh_A 315 RDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRP--ESYVSMENFYTTTVYDKGSEVM 392 (889)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSC--SEESCGGGCCCHHHHHHHHHHH
T ss_pred cccccceeeHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCC--cchhhhhhhccchhhhHHHHHH
Confidence 99999999999999999888776654321 11111110112355677778888853 2345677889999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcc-------CCCHHHHHHHHhcCCCceEEEEEEeC----c-
Q 007232 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGS-------GEPVNKLMNSWTKQKGYPVISVKVKE----E- 467 (612)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~-------~~~l~~~~~~W~~~~g~P~l~v~~~~----~- 467 (612)
|||+..||++.|+++|+.|+++|++++++++|||+++++++ |.+++. |++|++|+|+|+++|+++. +
T Consensus 393 rML~~~lGde~F~~gLr~Yl~~~~~~natt~Df~~ale~as~~~~~~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~~ 471 (889)
T 3ebh_A 393 RMYLTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKKQ 471 (889)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSEECHHHHHHHHHHHHHHHHTCTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTTE
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhccCCCCCCHHH-HHHHhcCCCCceEEEEEeecCCCCE
Confidence 99999999999999999999999999999999999999999 999986 6899999999999999764 2
Q ss_pred -EEEEEEEEeecCCCCCCCeEEEEEEEEECc---ccc---eeeEEeeccceEEEecccccccccCCCCCCceEEeccCce
Q 007232 468 -KLELEQSQFLSSGSPGDGQWIVPITLCCGS---YDV---CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQT 540 (612)
Q Consensus 468 -~~~i~Q~~f~~~~~~~~~~w~iPl~~~~~~---~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~~~ 540 (612)
+++|+|+++...+..+...|.|||++...+ +.. ...+.++.+++++.++.+. .. -+..+|.+..
T Consensus 472 ~~ltl~Q~~~~~~~~~~~~~~~IPl~v~l~~~~~G~~~~~~~~l~l~~~~q~f~~~~~~-------~~--p~~sl~r~fs 542 (889)
T 3ebh_A 472 YSIHVNQYTKPDENQKEKKPLFIPISVGLINPENGKEMISQTTLELTKESDTFVFNNIA-------VK--PIPSLFRGFS 542 (889)
T ss_dssp EEEEEEEECCCCSSCSSCCCCCEEEEEEEECTTTCCBCSCCEEEEECSSEEEEEESCCC-------SC--CEEEESTTCC
T ss_pred EEEEEEEecCCCCCCCCCceEEEEEEEEEEeCCCCccccceeEEEecCCcEEEEEcCCC-------CC--CeEEEcCCCC
Confidence 688888887655555556899999997632 222 2356778888999997531 22 4667999999
Q ss_pred EEEEEEcC--HHHHHHH
Q 007232 541 GFYRVKYD--KDLAARL 555 (612)
Q Consensus 541 gyyrV~Yd--~~~w~~l 555 (612)
+++|++|+ .+.+..|
T Consensus 543 a~v~l~~~~~~~~l~~l 559 (889)
T 3ebh_A 543 APVYIEDQLTDEERILL 559 (889)
T ss_dssp SSSEEECCCCHHHHHHH
T ss_pred ceEEEeCCCCHHHHHHH
Confidence 99999977 4444443
No 7
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=8.3e-89 Score=771.31 Aligned_cols=536 Identities=21% Similarity=0.291 Sum_probs=443.6
Q ss_pred cCCCCCCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECCcCEEEEEecCeeeeEEEeeeeccCCCccccceeEEEec
Q 007232 4 FKGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVE 83 (612)
Q Consensus 4 ~~~~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~ 83 (612)
...++|+|...+| ||+|+++++++..+++|+++|++... +++.|+||+.+|+|.+|.+++. ... .++.
T Consensus 30 ~~~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~~~-~~~~l~Ld~~~L~I~sV~v~G~---------~l~-~y~~ 97 (891)
T 3b34_A 30 YRHDYRAPDYQIT-DIDLTFDLDAQKTVVTAVSQAVRHGA-SDAPLRLNGEDLKLVSVHINDE---------PWT-AWKE 97 (891)
T ss_dssp EGGGCCCCSEEEE-EEEEEEECCSSCEEEEEEEEEEECSC-TTCCEEEECSSCEEEEEEETTE---------ECC-SEEE
T ss_pred chhhCCCCCceeE-EEEEEEEEECCceEEEEEEEEEEccC-CCCEEEEECCCCEEEEEEEcCE---------Ecc-eEEe
Confidence 3466777776665 89999999999899999988887654 4678999999999999998642 111 3444
Q ss_pred CceEEEEEeCCccCCceEEEEEEEEeee--cCCCCceEEeeeccCCeeeeeeeeccCcCCCCceeeecCCCCCeeEEEEE
Q 007232 84 ADEILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKIT 161 (612)
Q Consensus 84 ~~~~l~i~l~~~l~~g~~~l~i~y~g~~--~~~~~G~~~~~~~~~g~~~~~~~t~~~p~~ar~~fPc~Dep~~ka~f~l~ 161 (612)
+++.|+|. +| |+.++|+|.|++.. +....|+|++. .+++|||||.+||+||||||+|+.||+|+++
T Consensus 98 ~~~~L~I~---~l-p~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~it 165 (891)
T 3b34_A 98 EEGALVIS---NL-PERFTLKIINEISPAANTALEGLYQSG--------DALCTQCEAEGFRHITYYLDRPDVLARFTTK 165 (891)
T ss_dssp ETTEEEEC---SC-CSEEEEEEEEEECGGGCCSCCEEEEET--------TEEEEECTTTTGGGTSSBCCSTTCCEEEEEE
T ss_pred eCCEEEEE---eC-CCeEEEEEEEEEeecccCCCceEEEeC--------CEEEeccccCCCCccccCCCCcccceEEEEE
Confidence 55678876 34 36899999999864 34567999874 2678999999999999999999999999999
Q ss_pred EEeCCC-C-eEeecCcccceee-cCCeEEEEEecCCCcceeEEEEEEeeeeeeecc--c--CCCeEEEEEEeCCchhhHH
Q 007232 162 LDVPSE-L-VALSNMPVIDEKV-DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--T--SDGIKVRVYCQVGKANQGK 234 (612)
Q Consensus 162 i~~p~~-~-~~isn~~~~~~~~-~~~~~~~~f~~t~~~s~yl~a~~vg~f~~~~~~--~--~~~~~v~v~~~~~~~~~~~ 234 (612)
|++|++ | +++|||++.++.. .+++++++|+.++|||+|++||++|+|+.++.. + .+++++++|++|+..+.++
T Consensus 166 I~~p~~~y~~alSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~ 245 (891)
T 3b34_A 166 IIADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAP 245 (891)
T ss_dssp EEEETTTCCEEEESSEEEEEEECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCH
T ss_pred EEeccccceEEEeCCccccceeecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHH
Confidence 999997 6 8999999877643 567889999999999999999999999988742 2 2358999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCcCCCCccEEEecCCCccchhcccceeeecccccccCCCChHHHHHHHHHHHHHHHHHHHh
Q 007232 235 FALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWF 314 (612)
Q Consensus 235 ~~l~~~~~~l~~~e~~fg~~yP~~k~d~V~~p~~~~~ame~~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaHqWf 314 (612)
++++.+.+++++||++||+|||++|+++|++|+|..|||||||+++|++..+++++...+...++.+..+||||+|||||
T Consensus 246 ~al~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWF 325 (891)
T 3b34_A 246 WAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWT 325 (891)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTB
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999988777667777889999999999999
Q ss_pred cCccCccccchhHHhhhHHHHHHHHHhhhcCCchhhHHHHH--HHHH-hhhcccccCCCCCceeecCCccccccccceee
Q 007232 315 GNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFL--DECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAIS 391 (612)
Q Consensus 315 GnlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~d~~~~~~pl~~~~~~~~~~~~~f~~i~ 391 (612)
||+|||+||+++|||||||+|++..+.....+... .++. .... ..+..|+...++|+.. .++.+++..|+.++
T Consensus 326 GNlVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~~--~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~ 401 (891)
T 3b34_A 326 GNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAV--NRINNVRTMRGLQFAEDASPMAHPIRP--DMVIEMNNFYTLTV 401 (891)
T ss_dssp TTTEEESSGGGHHHHHHHHHHHHHHHHHHHSCHHH--HHHHHHHHHHHTHHHHHTSTTCCCSSC--SEESCGGGGCCHHH
T ss_pred CCCCcccchhhceehHHHHHHHHHHHHHHHhCHHH--HHHHHHHHHHHhhhhhhccccCCCCcc--ccccccccccccch
Confidence 99999999999999999999999888877665321 1111 1111 2355677778888864 23456778899999
Q ss_pred eechhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHHHHHHhcCCCceEEEEEEeC----c
Q 007232 392 YRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKE----E 467 (612)
Q Consensus 392 Y~Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~l~v~~~~----~ 467 (612)
|.||++|++||+..||++.|+++|+.|+++|++++++++|||+++++++|.++++| ++|++++|+|+++|+++. +
T Consensus 402 Y~KGa~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~att~Df~~ale~~sg~dL~~f-~~W~~q~G~P~l~V~~~~~~~~~ 480 (891)
T 3b34_A 402 YEKGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHF-RRWYSQSGTPIVTVKDDYNPETE 480 (891)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHCCCCTTT-THHHHCCSCCEEEEEEEEETTTT
T ss_pred hhHHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHHH-HHHHcCCCCceEEEEEEeecCCC
Confidence 99999999999999999999999999999999999999999999999999999985 799999999999998752 2
Q ss_pred --EEEEEEEEeecCCCCCCCeEEEEEEEEECc--ccc----------eeeEEeeccceEEEecccccccccCCCCCCceE
Q 007232 468 --KLELEQSQFLSSGSPGDGQWIVPITLCCGS--YDV----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWI 533 (612)
Q Consensus 468 --~~~i~Q~~f~~~~~~~~~~w~iPl~~~~~~--~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 533 (612)
+++|+|+++...+......|.|||++...+ +.. ...+++++++.++.++.+ ... .|+
T Consensus 481 ~~~ltl~Q~~~~~~~~~~~~~~~iPi~v~l~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v-------~~~--P~~ 551 (891)
T 3b34_A 481 QYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNV-------YFQ--PVP 551 (891)
T ss_dssp EEEEEEEEECCCBTTBSCCCCCCEEEEEEEECTTSCBCCCEETTEECCSEEEECSSEEEEEECCC-------CSC--CEE
T ss_pred EEEEEEEEecCCCCCCCCCceEEEEEEEEEEcCCCCcccccccccccceEEEecCCcEEEEEccC-------CCC--CcE
Confidence 589999987544444456899999997642 221 124677788888888742 233 699
Q ss_pred EeccCceEEEEEEcCHHHHHHHHHHHHcCCCChhhHHHHHHHHHHH
Q 007232 534 KLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFAL 579 (612)
Q Consensus 534 ~~N~~~~gyyrV~Yd~~~w~~l~~~l~~~~i~~~~r~~li~D~~~l 579 (612)
.+|.+..|||||+||..+|+++...... -++.+|.+.++++...
T Consensus 552 ~l~~~~s~~~~v~~~~~~~~l~~~l~~d--~d~~~R~~a~~~L~~~ 595 (891)
T 3b34_A 552 ALLCEFSAPVKLEYKWSDQQLTFLMRHA--RNDFSRWDAAQSLLAT 595 (891)
T ss_dssp EESTTCCSSCEEECCCCHHHHHHHHHHC--SSHHHHHHHHHHHHHH
T ss_pred EEcCCCcceEEEeCCCCHHHHHHHHhhC--CChhHHHHHHHHHHHH
Confidence 9999999999999999998887654432 4578888888777654
No 8
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=2.1e-84 Score=716.93 Aligned_cols=519 Identities=18% Similarity=0.276 Sum_probs=411.8
Q ss_pred CCCCCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECC-cCEEEEEecCeeeeEEEeeeeccCCCccccceeEEEec-
Q 007232 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVE- 83 (612)
Q Consensus 6 ~~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~- 83 (612)
..+|+|..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|.+|.+.+..+. .+...+..+.
T Consensus 18 ~~~~~p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~v~~~~g~----~~~~~~~~~~~ 93 (605)
T 3cia_A 18 YTYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVMAKNSQGQ----WVKVNYDLAKR 93 (605)
T ss_dssp SCCCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEEEEEEEEECTTCC----EEEECEEEEEE
T ss_pred ccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEcCCCC----ccceeEEecCc
Confidence 5689999999999999999999999999999999999876 789999999999999998310000 0122333332
Q ss_pred ---CceEEEEEeCCccCCceEEEEEEEEeeecCCCCceEEeee-ccCCeeeeeeeeccCcCCCCceeeecCCCCCeeEEE
Q 007232 84 ---ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFK 159 (612)
Q Consensus 84 ---~~~~l~i~l~~~l~~g~~~l~i~y~g~~~~~~~G~~~~~~-~~~g~~~~~~~t~~~p~~ar~~fPc~Dep~~ka~f~ 159 (612)
.++.|.|.++ ++.++|+|.|+|.++. .|++.... ..+|..+++++|||||.+||+||||||+|..||+|+
T Consensus 94 ~~~~~~~l~i~l~----~~~~~l~i~y~~~~~~--~gl~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~katf~ 167 (605)
T 3cia_A 94 DDVLGSKLTINTP----LNAKKVRVYYNSTEKA--TGLQWLSAEQTAGKEKPFLFSQNQAIHARSWIPIQDTPSVRVTYT 167 (605)
T ss_dssp CSSSCEEEEECCC----TTCSEEEEEEEECTTC--TTEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCCTTCCEEEE
T ss_pred cccCCCeEEEEeC----CceEEEEEEEEEecCC--CceEEecccccCCCcccEEEecCcccChhhceecCCCcCceeEEE
Confidence 3567888765 2789999999998654 46654332 235667788899999999999999999999999999
Q ss_pred EEEEeCCCCeEeecCcccceeecCCeEEEEEecCCCcceeEEEEEEeeeeeeecccCCCeEEEEEEeCCchhhHHHHHHH
Q 007232 160 ITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 239 (612)
Q Consensus 160 l~i~~p~~~~~isn~~~~~~~~~~~~~~~~f~~t~~~s~yl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~~ 239 (612)
++|++|++|.|+|||....+...++ +++|+.++|||+|++||++|+|...+ .|.++++|++|+..+.++++++.
T Consensus 168 i~i~~p~~~~alsng~~~~~~~~~~--~~~f~~t~pmstYl~a~~vg~f~~~~----~g~~~~v~~~p~~~~~~~~~~~~ 241 (605)
T 3cia_A 168 ARITTDKDLLAVMSANNEPGTERDG--DYFFSMPQAIPPYLIAIGVGDLEFKA----MSHQTGIYAESYILDAAVAEFDD 241 (605)
T ss_dssp EEEECCTTCEEEESSEEC----CCS--EEEEEEEEEECGGGCCEEEESCEEEE----SSSSEEEEECSTTHHHHHHHSTT
T ss_pred EEEEEcCCcEEEecCCccceecCCC--eEEEeeCCCccceeEEEEEeeeeEec----CCCeEEEEeccChHHHHHHHHHH
Confidence 9999999999999885433322233 78999999999999999999999876 25689999999999889999999
Q ss_pred HHHHHHHHHHHhCCCcCCCCccEEEe-cCCCccchhcccceeeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCcc
Q 007232 240 AVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLV 318 (612)
Q Consensus 240 ~~~~l~~~e~~fg~~yP~~k~d~V~~-p~~~~~ame~~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnlV 318 (612)
+.+++++++++|| +||++|+|+|++ |+|+.|||||||+ +|.+..++.++. ....+||||+|||||||+|
T Consensus 242 ~~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~gl-tf~~~~ll~~~~--------~~~~viaHElaHqWfGnlV 311 (605)
T 3cia_A 242 TQAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENPRL-SFITPTVVAGDK--------SLVNLIAHELAHSWSGNLV 311 (605)
T ss_dssp HHHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCTTE-EEECGGGCCSSS--------CSTHHHHHHHHHTTBTTTE
T ss_pred HHHHHHHHHHHhC-CCCCccccEEEECCccCCCcccCCcE-EEecchhccCcH--------HHHHHHHHHHHHHhhcccc
Confidence 9999999999999 999999999999 4999999999998 466665666543 1457999999999999999
Q ss_pred CccccchhHHhhhHHHHHHHHHhhhcCCchhh--HHHHHHHHH-hhhccccc-CCCCCceeecCCccccccccceeeeec
Q 007232 319 TMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGL-AESHPIEVEVNHTGEIDEIFDAISYRK 394 (612)
Q Consensus 319 t~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~-~~~~pl~~~~~~~~~~~~~f~~i~Y~K 394 (612)
||+||+|+|||||||+|++++++++.+|++.. ...+..+.+ ..+ +.. ..++|+...+. ..+++..|+.++|.|
T Consensus 312 T~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~~pl~~~~~-~~~~~~~f~~i~Y~K 388 (605)
T 3cia_A 312 TNESWRDLWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNAEI--LELDASDTQLYIDLK-GRDPDDAFSGVPYVK 388 (605)
T ss_dssp EESSTTSTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HHSCTTTTSSSCCCT-TCCTTTSCCSHHHHH
T ss_pred ccCcchHhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH--HhhccCCCCcccCCC-CCChhHhhCccchhH
Confidence 99999999999999999999999998887532 111111111 122 334 56788765543 245567899999999
Q ss_pred hhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCC----CHHH-HHHHHhcCCCceEEEEEEeCcEE
Q 007232 395 GASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE----PVNK-LMNSWTKQKGYPVISVKVKEEKL 469 (612)
Q Consensus 395 g~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~----~l~~-~~~~W~~~~g~P~l~v~~~~~~~ 469 (612)
|+++|+||+..+|++.|+++||.|+++|++++++++|||+++++++|. +++. +|++|++++|+|+++++.+.+.+
T Consensus 389 Ga~vl~mL~~~lG~e~F~~~lr~yl~~~~~~~~t~~df~~~l~~~~~~~~~~~l~~~~~~~W~~~~G~P~~~~~~~~~~~ 468 (605)
T 3cia_A 389 GQLFLMYLEEKFGRERFDAFVLEYFDSHAFQSLGTDNFVKYLKANLTDKYPNIVSDNEINEWIFKAGLPSYAPQPTSNAF 468 (605)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHTTTTTSTTSSCHHHHHHHHHSSSCCSSSCCCCCHHH
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhccccccccchhhHHHHhcCCCCCceeccCCchHH
Confidence 999999999999999999999999999999999999999999999875 5655 79999999999998876543110
Q ss_pred EEEEEEeecCCCCCCCeEEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCCCceEEeccCceEEEEEEcCH
Q 007232 470 ELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDK 549 (612)
Q Consensus 470 ~i~Q~~f~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~~~gyyrV~Yd~ 549 (612)
. + ......-|+.... . . ..+.|++|+.
T Consensus 469 ~--~------------------------~~~l~~~w~~~~~----------------~---~--------~~~~~~~~~~ 495 (605)
T 3cia_A 469 K--V------------------------IDKQINQLVTDEL----------------T---L--------EQLPTAQWTL 495 (605)
T ss_dssp H--H------------------------HHHHTCCTTTTSS----------------C---C--------SCSGGGGCCS
T ss_pred H--H------------------------HHHHHHHHHhcCC----------------C---c--------cccchhhCCH
Confidence 0 0 0000000111100 0 0 1123899999
Q ss_pred HHHHHHHHHHHcCCCChhhHHHHHHHHHHHHHhcCCCHHHHHHHHHhcCcCCCHhHHHHhh
Q 007232 550 DLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLI 610 (612)
Q Consensus 550 ~~w~~l~~~l~~~~i~~~~r~~li~D~~~l~~~g~l~~~~~~~l~~~l~~e~~~~~w~~~~ 610 (612)
.+|..+++.|.+ .|+ .+|+++|||+|+|+.++.. ++.+..+.++.++.++.+|..+.
T Consensus 496 ~~~~~~l~~l~~-~l~-~~~~~~l~~~~~~~~~~n~--ei~~~~~~~~~~~~~~~~~~~~~ 552 (605)
T 3cia_A 496 HEWLHFINNLPV-DLD-HQRMVNLDKAFDLTNSSNA--EIAHAWYLLSVRADYKEVYPAMA 552 (605)
T ss_dssp HHHHHHHHHSCS-CCT-TC-CHHHHHHHCCSSCSSH--HHHHHHHHHHHHHTCGGGHHHHH
T ss_pred HHHHHHHHhcCc-cCC-HHHHHHHHHhhCCCcCCCH--HHHHHHHHHHHhcCChhHHHHHH
Confidence 999999999987 688 9999999999999888655 57899999999999999998765
No 9
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=5e-83 Score=706.32 Aligned_cols=450 Identities=25% Similarity=0.382 Sum_probs=382.1
Q ss_pred CCCCCCCCc-eeeeEEEEEEecCCCCeEEEEEEEEEEEECC-cCEEEEEecCeeeeEEEeeeeccCCCccccceeEEEec
Q 007232 6 GQPRLPKFA-VPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVE 83 (612)
Q Consensus 6 ~~~rLp~~~-~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~~~ 83 (612)
.++..|..+ ++.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|++|.+++... .. ......+.
T Consensus 5 ~s~a~p~~~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~I~~V~v~g~~~----~~-~~~~~~~~ 79 (608)
T 3u9w_A 5 CSLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQEV----KY-ALGERQSY 79 (608)
T ss_dssp TCCSCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETTEEC----CE-EECCCCGG
T ss_pred ccccCcccCCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCEEc----ce-eccccccc
Confidence 356778776 7999999999999999999999999999876 58999999999999999875311 00 00111233
Q ss_pred CceEEEEEeCCccCCc-eEEEEEEEEeeecCCCCceEEeeec-cCCeeeeeeeeccCcCCCCceeeecCCCCCeeEEEEE
Q 007232 84 ADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYE-LNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKIT 161 (612)
Q Consensus 84 ~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~~~~~~~-~~g~~~~~~~t~~~p~~ar~~fPc~Dep~~ka~f~l~ 161 (612)
.++.+.|.++.+|++| .++|+|.|+|+++.. |++...+. .+|..+++++|||||.+||+||||||+|.+||+|+++
T Consensus 80 ~~~~l~I~l~~~l~~g~~~~l~I~y~~~~~~~--~~~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~Katf~i~ 157 (608)
T 3u9w_A 80 KGSPMEISLPIALSKNQEIVIEISFETSPKSS--ALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAE 157 (608)
T ss_dssp GCEEEEEEEEEEECTTCEEEEEEEEECCTTCT--TEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCSTTCCEEEEEE
T ss_pred cCceEEEEcCCCCCCCCEEEEEEEEEEEcCCC--ceeeecccccCCCcceEEEEcccCCCCCEEEEecCccceeEEEEEE
Confidence 5678999999999999 899999999986554 55444443 3577788899999999999999999999999999999
Q ss_pred EEeCCCCeEeecCcccceee---cCCeEEEEEecCCCcceeEEEEEEeeeeeeecccCCCeEEEEEEeCCchhhHHHHHH
Q 007232 162 LDVPSELVALSNMPVIDEKV---DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALN 238 (612)
Q Consensus 162 i~~p~~~~~isn~~~~~~~~---~~~~~~~~f~~t~~~s~yl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~ 238 (612)
|++|++++|+|||+..++.. ++++++++|..++|||+|++||+||+|+..+ .|.++++|++|+..+.++++++
T Consensus 158 I~~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~----~~~~~~v~~~p~~~~~~~~~~~ 233 (608)
T 3u9w_A 158 VSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQ----IGPRTLVWSEKEQVEKSAYEFS 233 (608)
T ss_dssp EEEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESCEEEE----EETTEEEEECHHHHHHHHHHTT
T ss_pred eeCCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeeeeeEe----cCCceEEEeChhhHHHHHHHHH
Confidence 99999999999998876532 3468899999999999999999999998765 3577899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCcCCCCccEEEe-cCCCccchhcccceeeecccccccCCCChHHHHHHHHHHHHHHHHHHHhcCc
Q 007232 239 VAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNL 317 (612)
Q Consensus 239 ~~~~~l~~~e~~fg~~yP~~k~d~V~~-p~~~~~ame~~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGnl 317 (612)
.+.+++++||++|| |||++++++|++ |+|+.||||||||+++++..++.+.. +..+||||+|||||||+
T Consensus 234 ~~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~---------~~~viaHElAHqWfGnl 303 (608)
T 3u9w_A 234 ETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS---------LSNVIAHEISHSWTGNL 303 (608)
T ss_dssp THHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST---------TTHHHHHHHHTTTBTTT
T ss_pred HHHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcCcceeeeeeeecccch---------hHHHHHHHhhhhhhcCc
Confidence 99999999999999 999999999888 79999999999999999995554433 45689999999999999
Q ss_pred cCccccchhHHhhhHHHHHHHHHhhhcCCchhhHHHHHHHHH-hhhcccccCCCCCceeecCCcccc--ccccceeeeec
Q 007232 318 VTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEI--DEIFDAISYRK 394 (612)
Q Consensus 318 Vt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pl~~~~~~~~~~--~~~f~~i~Y~K 394 (612)
||++||+|+|||||||+|++++++++.+|++.....+..... .....|....++|+..++.+..++ +..|+.++|.|
T Consensus 304 VT~~~W~d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~i~Y~K 383 (608)
T 3u9w_A 304 VTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEK 383 (608)
T ss_dssp EEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHHHHH
T ss_pred CccccccchhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccccCChhhcccHHHHhH
Confidence 999999999999999999999999999998765555444333 233456677788887776665544 45799999999
Q ss_pred hhHHHHHHHHhhC-HHHHHHHHHHHHHHhccCCCCHHHHHHHHHhccCCCHHHH----HHHHhcCCCceEEEEEEeC---
Q 007232 395 GASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----MNSWTKQKGYPVISVKVKE--- 466 (612)
Q Consensus 395 g~~vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~~~l~~~----~~~W~~~~g~P~l~v~~~~--- 466 (612)
|+++|+||+..|| ++.|+++||.|+++|+|++++++||+++++++++.+++.+ |++|++++|+|+++|+++.
T Consensus 384 Ga~vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~~~~~~~~~W~~~~G~P~v~v~~d~~~~ 463 (608)
T 3u9w_A 384 GFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPNYDMTLT 463 (608)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHHTSCHHHHHHCCSSCSSCCCCCCTTT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhccccchhhHHHHHHHhcCCCCCceeeeeccccc
Confidence 9999999999998 6889999999999999999999999999999999999888 9999999999999998765
Q ss_pred -cEEEEEEEEe
Q 007232 467 -EKLELEQSQF 476 (612)
Q Consensus 467 -~~~~i~Q~~f 476 (612)
+.++++|+++
T Consensus 464 ~~~~~l~q~~~ 474 (608)
T 3u9w_A 464 NACIALSQRWI 474 (608)
T ss_dssp HHHHHHHHHHH
T ss_pred cceeeHHhHHh
Confidence 2456666543
No 10
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=6e-81 Score=691.24 Aligned_cols=519 Identities=18% Similarity=0.298 Sum_probs=403.2
Q ss_pred CCCCCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEECC----cCEEEEEecCeeeeEEEeeeeccCCCccccceeEEE
Q 007232 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD----TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVEL 81 (612)
Q Consensus 6 ~~~rLp~~~~p~~Y~l~l~~d~~~~~f~G~v~I~~~~~~~----~~~i~L~~~~l~i~~v~i~~~~~~~~~~~~~~~~~~ 81 (612)
..+|+|..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+.+|+|.+|.+++. ...+..
T Consensus 20 ~~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l~I~~v~v~g~---------~~~~~~ 90 (632)
T 2xq0_A 20 STLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGS---------KADFQI 90 (632)
T ss_dssp TCCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSEEEEEEEETTE---------ECCEEE
T ss_pred ccccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCCEEEEEEECCe---------ecceEE
Confidence 4579999999999999999999999999999999999876 799999999999999998542 123333
Q ss_pred ec----CceEEEEEeCCccCCceEEEEEEEEeeecCCCCceEEeee-ccCCeeeeeeeeccCcCCCCceeeecCCCCCee
Q 007232 82 VE----ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACKA 156 (612)
Q Consensus 82 ~~----~~~~l~i~l~~~l~~g~~~l~i~y~g~~~~~~~G~~~~~~-~~~g~~~~~~~t~~~p~~ar~~fPc~Dep~~ka 156 (612)
+. .++.|.|.++++ .+.++|+|.|+|+++. .|++.... ..+|. +++++|||||.+||+||||||+|.+||
T Consensus 91 ~~~~~~~~~~l~I~l~~~--g~~~~l~I~Y~g~~~~--~gl~~~~~~~~~g~-~~~~~Tq~ep~~AR~~fPc~D~P~~Ka 165 (632)
T 2xq0_A 91 EQRKEPLGSRLVINNASC--NDNFTLNIQFRTTDKC--TALQWLNSKQTKGG-KPYVFSQLEAIHARSLFPCFDTPSVKS 165 (632)
T ss_dssp CCCBTTTBCCEEEECCCS--SSEEEEEEEEEECTTC--SSEEEECTTTSTTS-SCEEEECCTTTTGGGTSCBCCSTTCCE
T ss_pred cccccccCcEEEEEecCC--CCEEEEEEEEeeecCc--CcceeecccccCCC-ceEEEeccccCCcceeeeecCCcccce
Confidence 32 356899998877 3399999999998765 35543322 22455 788899999999999999999999999
Q ss_pred EEEEEEEeCCCCeEeecCcccceeecCCeEEEEEecCCCcceeEEEEEEeeeeeeecccCCCeEEEEEEeCCchhhHHHH
Q 007232 157 TFKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFA 236 (612)
Q Consensus 157 ~f~l~i~~p~~~~~isn~~~~~~~~~~~~~~~~f~~t~~~s~yl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~ 236 (612)
+|+++|++| +.|++||....+...++ .+++|+.++|||+|++||+||+|...+. |.++++|++|+..+.++++
T Consensus 166 tf~i~I~~p--~~vv~sg~~~~~~~~~~-~~~~F~~t~pmstYLva~~vg~f~~~~~----g~~~~v~~~p~~~~~~~~~ 238 (632)
T 2xq0_A 166 TFTASIESP--LPVVFSGIRIEDTSKDT-NIYRFEQKVPIPAYLIGIASGDLSSAPI----GPRSTVYTEPFRLKDCQWE 238 (632)
T ss_dssp EEEEEEECS--SCEEESSEECCCC-----CEEEEEEEEEECGGGCCEEESSCEEEEE----ETTEEEEECHHHHHHHHHH
T ss_pred EEEEEEEEc--hHHhccCccccceecCC-CeEEEEeCCccchhheeeeEecceeecc----CCeeEEEEccchHHHHHHH
Confidence 999999999 98887664433322222 3789999999999999999999998762 5679999999988888889
Q ss_pred HH-HHHHHHHHHHHHhCCCcCCCCccEEEe-cCCCccchhcccceeeecccccccCCCChHHHHHHHHHHHHHHHHHHHh
Q 007232 237 LN-VAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWF 314 (612)
Q Consensus 237 l~-~~~~~l~~~e~~fg~~yP~~k~d~V~~-p~~~~~ame~~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaHqWf 314 (612)
++ .+.+++++||++|| |||++|+|+|++ |+|+.|||||||++ |.+..++.++. ....+||||+|||||
T Consensus 239 ~~~~~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn~glt-~~~~~ll~~~~--------~~~~viaHElAHqWf 308 (632)
T 2xq0_A 239 FENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESPNMT-FATPTLLAHDR--------SNIDVIAHELAHSWS 308 (632)
T ss_dssp HTTTHHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECCTTCE-EECGGGCCSSS--------CSTHHHHHHHHHTTB
T ss_pred HHHHHHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccccceEE-EeeceeccCch--------hHHHHHHHHHHHHHh
Confidence 98 99999999999999 999999999999 59999999999985 44544665543 145799999999999
Q ss_pred cCccCccccchhHHhhhHHHHHHHHHhhhcCCchhh--HHHHHHHHH-hhhcccccCCCCC---ceeecCCccccccccc
Q 007232 315 GNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGLAESHP---IEVEVNHTGEIDEIFD 388 (612)
Q Consensus 315 GnlVt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~~~~~p---l~~~~~~~~~~~~~f~ 388 (612)
||+||++||+|+|||||||+|++++++++.+|++.. ...+..+.. .++ +++..++| +...+....+++..|+
T Consensus 309 GnlVT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~pl~~l~~~~~~~~~~~~~f~ 386 (632)
T 2xq0_A 309 GNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNSI--DSMKDPERFSTLVQNLNDNTDPDDAFS 386 (632)
T ss_dssp TTTEEESSGGGTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HTCSSHHHHTSSSCCCCSSSCGGGGCS
T ss_pred cCCCccCCcchhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH--HhcccCCCCcccccCCCCCCChHHhcc
Confidence 999999999999999999999999999999887532 211111111 222 44445566 3333333455677899
Q ss_pred eeeeechhHHHHHHHHhhCH-HHHHHHHHHHHHHhccCCCCHHHHHHHHHhccC---CCHHH-HHHHHhcCCCceEEEEE
Q 007232 389 AISYRKGASVIRMLQNYLGA-ECFQRSLASYIKKYACSNAKTEDLWAALEEGSG---EPVNK-LMNSWTKQKGYPVISVK 463 (612)
Q Consensus 389 ~i~Y~Kg~~vl~mL~~~lG~-~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~~~---~~l~~-~~~~W~~~~g~P~l~v~ 463 (612)
.++|.||+++|+||+..||+ +.|+++|+.|+++|++++++++|||+++++++| .+++. +|++|++++|+|+ +++
T Consensus 387 ~i~Y~KGa~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~G~P~-~~~ 465 (632)
T 2xq0_A 387 TVPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPP-RPH 465 (632)
T ss_dssp SHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCCSCCC-CCC
T ss_pred chhhHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhhhccccccHHHHHHHhcCCCCCC-CcC
Confidence 99999999999999999999 999999999999999999999999999999987 46777 7999999999999 665
Q ss_pred EeCcE----EEEEEEEeecCCCCCCCeEEEEEEEEECcccceeeEEeeccceEE--EecccccccccCCCCCCceEEecc
Q 007232 464 VKEEK----LELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSF--DIKELLGCSISKEGDNGGWIKLNV 537 (612)
Q Consensus 464 ~~~~~----~~i~Q~~f~~~~~~~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~N~ 537 (612)
.+.+. ..+.| .|..... . .....++ .++ .. + .
T Consensus 466 ~~~~~~~~~~~l~~------------~w~~~~~----~---------~~~~~~~~~~~~----------~~--d-----~ 503 (632)
T 2xq0_A 466 FITALADNVYQLAD------------KWVEMAQ----H---------LKTTEDFRSEFN----------AI--D-----I 503 (632)
T ss_dssp CCCHHHHHHHHHHH------------HHHHHTT----T---------CCSHHHHHHHCC----------GG--G-----G
T ss_pred CCchHHHHHHHHHH------------HHHhccc----c---------cccccccccCCC----------HH--H-----H
Confidence 43310 00111 1211000 0 0000000 011 01 1 1
Q ss_pred CceEEEEEEcCHHHHHHHHHHHHcC------------CCChhhHHHHHHHHHH--HHHhcCCCHHHHHHHHHhcCcCCCH
Q 007232 538 NQTGFYRVKYDKDLAARLGYAIEMK------------QLSETDRFGILDDHFA--LCMARQQTLTSLLTLMASYSEETEY 603 (612)
Q Consensus 538 ~~~gyyrV~Yd~~~w~~l~~~l~~~------------~i~~~~r~~li~D~~~--l~~~g~l~~~~~~~l~~~l~~e~~~ 603 (612)
. +|+...|..+++.|..+ .++ .+|+++|||+|+ |+.++.. ++.+..+.++.++...
T Consensus 504 ~-------~~~~~~~~~fl~~l~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~~~n~--ei~~~~~~~~~~~~~~ 573 (632)
T 2xq0_A 504 K-------DFNSNQLVLFLETLTQNGHSNKKPKDFDWAKF-PVASRALLDIYQDNIVKSQNA--EVVFKMFKFQIFAKLQ 573 (632)
T ss_dssp T-------TCCHHHHHHHHHHHHTTCSSTTSCSCCCGGGC-HHHHHHHHHHTCCCCCTCCCH--HHHHHHHHHHHHTTCG
T ss_pred h-------hCCHHHHHHHHHHHHhcccccccccccCCCCC-HHHHHHHHHHHhhhhccCcCH--HHHHHHHHHHHhcCCh
Confidence 1 78999999999999742 356 899999999999 7666544 8889999999999999
Q ss_pred hHHHHhh
Q 007232 604 TVLSNLI 610 (612)
Q Consensus 604 ~~w~~~~ 610 (612)
.+|..+.
T Consensus 574 ~~~~~~~ 580 (632)
T 2xq0_A 574 EEYKHLA 580 (632)
T ss_dssp GGHHHHH
T ss_pred hHHHHHH
Confidence 9998765
No 11
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.96 E-value=1.9e-29 Score=275.20 Aligned_cols=296 Identities=14% Similarity=0.153 Sum_probs=202.4
Q ss_pred CeeEEEEEEEeCCC---CeEeecCcccceeecCCeEEE---EEecCCCcceeEEEEEEeeeeeeecccCCCeEEEEEEeC
Q 007232 154 CKATFKITLDVPSE---LVALSNMPVIDEKVDGNMKTV---SYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQV 227 (612)
Q Consensus 154 ~ka~f~l~i~~p~~---~~~isn~~~~~~~~~~~~~~~---~f~~t~~~s~yl~a~~vg~f~~~~~~~~~~~~v~v~~~~ 227 (612)
-..+++++|..|++ |.+.+.++..+.... +..++ .|..-.--| +.+|+|+..+ .+..|+++++...+
T Consensus 119 ~~~p~~~~i~~P~~~~~W~vaT~L~~~~~~~~-~~~~f~a~~yd~LvDsP-----v~~G~~~~~~-~~~~g~p~~l~v~~ 191 (597)
T 4fgm_A 119 TDLPCELHLHAPPEAPLWKVATGMPRKSGQPH-SWGCFRADNYDALIDYP-----FLIGDLTIEE-FIAHGIKHSLVLSG 191 (597)
T ss_dssp TTSCEEEEECCCTTCTTCEEEESSCBCSSCTT-SSEEEEESSHHHHTTCC-----EEEESCEEEE-EEETTEEEEEEEES
T ss_pred cCCcEEEEEECCCCCCcceEEecCCccCCCCC-cceEEEcCCHHHHhcch-----hcccCcEEEE-eccCCeEEEEEEEc
Confidence 45678999999999 999988876543211 22222 222111111 5688998776 34568888876554
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhCCCcCCCCccEEEe-cCCCccchhccccee--eecccccccCCCChHHHHHHHHHH
Q 007232 228 GKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVT--YRETALLYDDQHSAAANKQRVATV 304 (612)
Q Consensus 228 ~~~~~~~~~l~~~~~~l~~~e~~fg~~yP~~k~d~V~~-p~~~~~ame~~gli~--~~~~~ll~~~~~~~~~~~~~~~~~ 304 (612)
......+..+..+++++++++++|| +||++++++++. ++...|||||.+..+ +++..+.................+
T Consensus 192 ~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~~~~~~~~~~~~~l 270 (597)
T 4fgm_A 192 RHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQYEMNDNYQTFLSL 270 (597)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTCCSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhccccccccchhhhhchhhh
Confidence 4434567888899999999999999 999999999864 455789999988644 555533222111223455567889
Q ss_pred HHHHHHHHHhcCccCcc-----------ccchhHHhhhHHHHHHHHHhhhcC--CchhhHHHHHHHHHhhhcccccCCCC
Q 007232 305 VAHELAHQWFGNLVTME-----------WWTHLWLNEGFATWVSYLAADSLF--PEWKIWTQFLDECTEGLRLDGLAESH 371 (612)
Q Consensus 305 iaHElaHqWfGnlVt~~-----------~w~d~WL~EGfA~y~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~ 371 (612)
++||++||||||.|+|+ +|+++||+||||+|++.++..+.. ....+. ..+.+....+........+
T Consensus 271 iaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r~G~~~~~~~~-~~l~~~i~~~~~~~gr~~~ 349 (597)
T 4fgm_A 271 CCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHTSGIIDEKRYL-KLLGDTLSRVERGAGQYQQ 349 (597)
T ss_dssp HHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHHTTSSCHHHHH-HHHHHHHHHHHHSGGGGTC
T ss_pred HhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHHcCCCCHHHHH-HHHHHHHHHhhcCCCcccc
Confidence 99999999999888764 568999999999999998876542 221111 1122222222212222223
Q ss_pred Cceeec-------CCccccccccceeeeechhHHHHHHHHhhCH-----HHHHHHHHHHHHHhcc--CCCCHHHHHHHHH
Q 007232 372 PIEVEV-------NHTGEIDEIFDAISYRKGASVIRMLQNYLGA-----ECFQRSLASYIKKYAC--SNAKTEDLWAALE 437 (612)
Q Consensus 372 pl~~~~-------~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~-----~~F~~~l~~yl~~~~~--~~~~~~df~~~l~ 437 (612)
++.... ..+++.........|.||+++++||+..|++ +.|+++||.|+++|.. ++++++||.++++
T Consensus 350 sl~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~~~~~t~~d~~~~~e 429 (597)
T 4fgm_A 350 SVTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKTSIGTADDTVINWLN 429 (597)
T ss_dssp CHHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTTTCCBCTTHHHHHHH
T ss_pred ChHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcCCCCCCHHHHHHHHH
Confidence 333110 0111111112234699999999999888855 5899999999999875 5889999999999
Q ss_pred hccCCCHHHHHHHHhcCCCce
Q 007232 438 EGSGEPVNKLMNSWTKQKGYP 458 (612)
Q Consensus 438 ~~~~~~l~~~~~~W~~~~g~P 458 (612)
+++|.++.+||++|+++++.+
T Consensus 430 ~~sG~dl~~ff~~~l~~t~~~ 450 (597)
T 4fgm_A 430 QYPGIDISDFLKDALYNKESL 450 (597)
T ss_dssp TSTTCCCHHHHHHHHHSCSCC
T ss_pred HhcCcCHHHHHHHHHhCCCCc
Confidence 999999999999999999864
No 12
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=99.96 E-value=9.1e-30 Score=269.55 Aligned_cols=145 Identities=26% Similarity=0.464 Sum_probs=123.9
Q ss_pred CceEEEEEEeCcEEEEEEEEeecCCCC---CCCeEEEEEEEEECcccceeeEEeeccceEEEecccccccccCCCCCCce
Q 007232 456 GYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGW 532 (612)
Q Consensus 456 g~P~l~v~~~~~~~~i~Q~~f~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (612)
|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+|++.++.++.++. ++ +|
T Consensus 1 GyPvvtV~~~~~~~~l~Q~RFl~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~l~~---------~~--~w 69 (419)
T 3rjo_A 1 GFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV--EW 69 (419)
T ss_dssp CEEEEEEEEETTEEEEEEEEEC----------CCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC--SC
T ss_pred CCCEEEEEECCCEEEEEEeeccCCCCCCCCCCeEEEEEEEEEeCCCCccceEEEecCceEEEcCC---------CC--ce
Confidence 899999999889999999999986542 24589999999887655445678877766666642 34 89
Q ss_pred EEeccCceEEEEEEcCHHHHHHHHHHHHcC--CCChhhHHHHHHHHHHHHHhcCCCHHHHHHHHHhcCcCCCHhHHHHhh
Q 007232 533 IKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLI 610 (612)
Q Consensus 533 i~~N~~~~gyyrV~Yd~~~w~~l~~~l~~~--~i~~~~r~~li~D~~~l~~~g~l~~~~~~~l~~~l~~e~~~~~w~~~~ 610 (612)
|++|++++||||||||+++|++|+++|..+ .||+.||||||+|+|+||++|+++++.+|+|++||++|++|+||..++
T Consensus 70 i~~N~~~~GyYRVnYd~~~w~~L~~~L~~~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~y~~w~~~~ 149 (419)
T 3rjo_A 70 IKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGL 149 (419)
T ss_dssp EEEEESSSSCCEEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCSHHHHHHHH
T ss_pred EEEeCCccceEEEEeCHHHHHHHHHHHhhCCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 999999999999999999999999999754 799999999999999999999999999999999999999999999886
Q ss_pred c
Q 007232 611 T 611 (612)
Q Consensus 611 ~ 611 (612)
+
T Consensus 150 ~ 150 (419)
T 3rjo_A 150 N 150 (419)
T ss_dssp H
T ss_pred H
Confidence 4
No 13
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=86.12 E-value=2.4 Score=41.25 Aligned_cols=103 Identities=23% Similarity=0.331 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCcCCCC--ccEEEecCCCc-c---chhcccceeeecccccccCCCChH-HHHHHHHHHHH
Q 007232 234 KFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAA-G---AMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVA 306 (612)
Q Consensus 234 ~~~l~~~~~~l~~~e~~fg~~yP~~k--~d~V~~p~~~~-~---ame~~gli~~~~~~ll~~~~~~~~-~~~~~~~~~ia 306 (612)
-.+...+.++.+||.+.|| .-+++. ..++..=.+.. + ..+| .+...+.+.|.+..... .....-..+++
T Consensus 68 vdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~Vhyg~~~~~~~y~N---AfWdg~~m~fGdGdg~~f~~~~~~lDVv~ 143 (301)
T 1bqb_A 68 VDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNN---AAWIGDKMIYGDGDGRTFTNLSGANDVVA 143 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTC---EEECSSSEEECCCCSSSBSCGGGCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEEeCCCCCCCCccC---cEEcCCEEEEEcCCCcccCCcccccceee
Confidence 3466678899999999999 667653 33333211111 0 1222 11122223333221000 00001247899
Q ss_pred HHHHHHHhcCccCccccchh-HHhhhHHHHHHHHH
Q 007232 307 HELAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLA 340 (612)
Q Consensus 307 HElaHqWfGnlVt~~~w~d~-WL~EGfA~y~~~~~ 340 (612)
||++|--.-....+....+- =|||||+..+...+
T Consensus 144 HE~tHGVt~~~agl~y~~eSGaLnEs~SDifg~~~ 178 (301)
T 1bqb_A 144 HEITHGVTQQTANLEYKDQSGALNESFSDVFGYFV 178 (301)
T ss_dssp HHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred eecccceecccCCCcccCCcCchhHHHHHHHhHhh
Confidence 99999776655555444443 38999999999763
No 14
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=84.32 E-value=31 Score=33.39 Aligned_cols=98 Identities=17% Similarity=0.253 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcCCCCccEEEecCCCccchhc--c--cceeeecccccccCCCChHHHHHHHHHHHHHH
Q 007232 233 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMEN--Y--GLVTYRETALLYDDQHSAAANKQRVATVVAHE 308 (612)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~fg~~yP~~k~d~V~~p~~~~~ame~--~--gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHE 308 (612)
+-.|.-.+.++.+||.+.|| .-++.. .++..-.+. ...+| | ..++|....-.+.+. .-..+++||
T Consensus 73 ~~DAhy~a~~~~d~y~~~~g-r~~id~-~l~~~Vhyg-~~y~NAfWdG~~M~fGDG~~~~~p~--------~~lDVv~HE 141 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFG-TSPLTH-KLYMKVHYG-RSVENAYWDGTAMLFGDGATMFYPL--------VSLDVAAHE 141 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSSS-CEEEEESCT-TTCCCEEECSSCEEECCCCSSBSCS--------CCHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcC-CCCCCC-ceEEEEecC-CCccCcEecCcEEEeeCCCcccccc--------cccceeeec
Confidence 34455577899999999999 667763 344333221 12222 2 123343321111111 135789999
Q ss_pred HHHHHhcCccCccccchhH-HhhhHHHHHHHHHh
Q 007232 309 LAHQWFGNLVTMEWWTHLW-LNEGFATWVSYLAA 341 (612)
Q Consensus 309 laHqWfGnlVt~~~w~d~W-L~EGfA~y~~~~~~ 341 (612)
++|--......+....+-- |||||+..+...+-
T Consensus 142 ~tHGVt~~~agL~y~~eSGaLnEs~SDifG~~ve 175 (301)
T 1u4g_A 142 VSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAE 175 (301)
T ss_dssp HHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeccccCccccCCccchhHHHHHHHHHHHH
Confidence 9999887766665555544 99999999997653
No 15
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=82.64 E-value=8.4 Score=37.37 Aligned_cols=102 Identities=25% Similarity=0.224 Sum_probs=59.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcCCCC--ccEEEe---cCCCccchhcccceeeeccc-ccccCCCChHHHHHHHHHHH
Q 007232 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAI---PDFAAGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 305 (612)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yP~~k--~d~V~~---p~~~~~ame~~gli~~~~~~-ll~~~~~~~~~~~~~~~~~i 305 (612)
.+..|...+.+..+||.+.|| .-+++. +.++.. ..-...|.=+...++|..-. ..+.+- .....++
T Consensus 62 aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~-------~~slDVv 133 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRYNNAFWNGSQMTYGDGDGSTFIAF-------SGDPDVV 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSCCCEEECSSCEEEECCCSSSBCCG-------GGSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCccCceecCCEEEEeCCCCcccccc-------ccccchh
Confidence 345567788999999999999 667652 333322 11111232223344444421 111111 0124789
Q ss_pred HHHHHHHHhcCccCccccch-hHHhhhHHHHHHHHHh
Q 007232 306 AHELAHQWFGNLVTMEWWTH-LWLNEGFATWVSYLAA 341 (612)
Q Consensus 306 aHElaHqWfGnlVt~~~w~d-~WL~EGfA~y~~~~~~ 341 (612)
+||+.|--..+........+ -=|||+|+..+...+-
T Consensus 134 aHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve 170 (304)
T 4ger_A 134 GHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ 170 (304)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred hhccccccccccCCccccCCccchhHHHHHHHHHHhc
Confidence 99999977655444333333 2489999999998765
No 16
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=82.08 E-value=2.8 Score=40.94 Aligned_cols=102 Identities=19% Similarity=0.126 Sum_probs=58.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcCCCC--ccEEEecCCC---ccchhcccceeeeccc-ccccCCCChHHHHHHHHHHH
Q 007232 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFA---AGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 305 (612)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yP~~k--~d~V~~p~~~---~~ame~~gli~~~~~~-ll~~~~~~~~~~~~~~~~~i 305 (612)
.+..|...+.+..+||.+.|| .-+++. ..++..-.+. ..|.=+...++|..-. ..+.+- .....++
T Consensus 69 aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~-------~~slDVv 140 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPL-------SGGIDVV 140 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCTTTCCCEEECSSCEEECCCCSSSBSCG-------GGCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecCCCccCceEcCCEEEEeCCCCcccccc-------cccccce
Confidence 345677788999999999999 667652 3333321121 1222223344444321 111111 0124789
Q ss_pred HHHHHHHHhcCccCccccchh-HHhhhHHHHHHHHHh
Q 007232 306 AHELAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 341 (612)
Q Consensus 306 aHElaHqWfGnlVt~~~w~d~-WL~EGfA~y~~~~~~ 341 (612)
+||+.|--...........+. =|||+|+..+...+-
T Consensus 141 ~HE~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve 177 (316)
T 3dnz_A 141 AHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVE 177 (316)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccCCCcccCCccchhHHHHHHHHHHHH
Confidence 999999776554443333333 489999999997654
No 17
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=79.47 E-value=0.78 Score=50.72 Aligned_cols=39 Identities=21% Similarity=0.425 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHhcCccCccccc---------hhHHhhhHHHHHHHH
Q 007232 301 VATVVAHELAHQWFGNLVTMEWWT---------HLWLNEGFATWVSYL 339 (612)
Q Consensus 301 ~~~~iaHElaHqWfGnlVt~~~w~---------d~WL~EGfA~y~~~~ 339 (612)
+..++.||++|.-=|...-+..|. -.|+.||||.|++..
T Consensus 422 Lee~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~~ 469 (785)
T 2y3u_A 422 LEELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGS 469 (785)
T ss_dssp HHHHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTTB
T ss_pred ecccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhcC
Confidence 345789999999955444444443 579999999999864
No 18
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=79.43 E-value=15 Score=36.18 Aligned_cols=105 Identities=17% Similarity=0.209 Sum_probs=57.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCcCCCC--ccEEEecCCCccchhcccceeeecccccccCCCChH-HHHHHHHHHHHHH
Q 007232 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHE 308 (612)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yP~~k--~d~V~~p~~~~~ame~~gli~~~~~~ll~~~~~~~~-~~~~~~~~~iaHE 308 (612)
.+..+...+.++.+||.+.|| .-++.. ..++..-.+. ...+| .++..+.+.|....... .....-..+++||
T Consensus 89 av~~ay~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg-~~y~N---AfWdG~~M~fGDG~g~~f~~~~~~lDVv~HE 163 (341)
T 2vqx_A 89 AVDEAYDYLGVTYDFFWQAFK-RNSLDNQGLPLTGSVHYG-KEYQN---AFWNGQQMVFGDGDGEIFNRFTIAIDVVGHA 163 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEESCS-SSCCC---EEECSSCEEECCCCSSSBCCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEecC-CCccC---ceecCcEeEeeCCCCcccCCcccchhhhhhh
Confidence 355566678899999999999 456642 3333322111 11122 01112223332211000 0000124689999
Q ss_pred HHHHHhcCccCccccchh-HHhhhHHHHHHHHHh
Q 007232 309 LAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 341 (612)
Q Consensus 309 laHqWfGnlVt~~~w~d~-WL~EGfA~y~~~~~~ 341 (612)
++|--......+....+- =|||||+.++...+-
T Consensus 164 ltHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve 197 (341)
T 2vqx_A 164 LAHGVTESEAGLIYFQQAGALNESLSDVFGSLVK 197 (341)
T ss_dssp HHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceecccCCccccCCCcchhhHHHHHHHHHHH
Confidence 999777655554444443 499999999997754
No 19
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.82 E-value=4.5 Score=32.71 Aligned_cols=67 Identities=19% Similarity=0.241 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhCCCcCCCCccEEEecCCCccchhc-----ccceeeecccccccCCCChHHHHHHHHHHHHHHHHHHH
Q 007232 239 VAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMEN-----YGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 313 (612)
Q Consensus 239 ~~~~~l~~~e~~fg~~yP~~k~d~V~~p~~~~~ame~-----~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 313 (612)
...++++-+.+..|++. + ++..+++-...|+-. -+.|.+... ++-. ....++..++|||++|-=
T Consensus 27 ~L~~~~~~l~~~~~~~~--~--~v~v~~~~~~NAf~~g~~~~~~~i~v~~g-Ll~~------l~~~El~aVlaHElgH~~ 95 (107)
T 3cqb_A 27 WLLETVGRQAQQAGIGM--P--TVAIYDSADINAFATGAKRDDSLVAVSTG-LLHN------MTRDEAEAVLAHEVSHIA 95 (107)
T ss_dssp HHHHHHHHHHHHHTCCC--C--EEEEECCSSEEEEEECCC--CCEEEEEHH-HHHH------SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC--C--eEEEEECCCcCEEEEecCCCCCEEEEcHH-HHhh------CCHHHHHHHHHHHHHHHH
Confidence 34555666666777653 3 344444322222221 134555544 2211 123458899999999976
Q ss_pred hcC
Q 007232 314 FGN 316 (612)
Q Consensus 314 fGn 316 (612)
-++
T Consensus 96 ~~h 98 (107)
T 3cqb_A 96 NGD 98 (107)
T ss_dssp TTC
T ss_pred CCC
Confidence 554
No 20
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=74.72 E-value=33 Score=33.19 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCcCCCCccEEEecCCC---ccchhcccceeeecccccccCCCChHHHHHHHHHHHHHHH
Q 007232 233 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFA---AGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHEL 309 (612)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~fg~~yP~~k~d~V~~p~~~---~~ame~~gli~~~~~~ll~~~~~~~~~~~~~~~~~iaHEl 309 (612)
+..|.-.+.++.+||.++|| .-|+. ..++..-.+. ..|.=+...++|....-.+.+- .-..+++||+
T Consensus 74 ~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NAfWdg~~m~fGDG~~~~~~~--------~slDVv~HE~ 143 (306)
T 3nqx_A 74 LNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFYPL--------VSLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCEEECSSCEEEECCCSSBSCS--------CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCccccCCEEEEeCCCcccccc--------cccchhhhhh
Confidence 34455567899999999999 66765 3333321111 1222223344554432111111 1357899999
Q ss_pred HHHHhcCccCcccc-chhHHhhhHHHHHHHHHh
Q 007232 310 AHQWFGNLVTMEWW-THLWLNEGFATWVSYLAA 341 (612)
Q Consensus 310 aHqWfGnlVt~~~w-~d~WL~EGfA~y~~~~~~ 341 (612)
.|--......+..- ..-=|||||+..+...+-
T Consensus 144 tHGvt~~~a~l~y~~esGaLnEs~SDifg~~ve 176 (306)
T 3nqx_A 144 SHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAAE 176 (306)
T ss_dssp HHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCccCCCCCcccchHHHHHHHHHH
Confidence 99877654333322 234589999999997653
No 21
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=50.19 E-value=19 Score=34.07 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 007232 298 KQRVATVVAHELAHQWFGN 316 (612)
Q Consensus 298 ~~~~~~~iaHElaHqWfGn 316 (612)
..++..+||||++|-=-++
T Consensus 97 ~~ELaaVLaHElgH~~~~H 115 (253)
T 3c37_A 97 ETELAGVLAHEINHAVARH 115 (253)
T ss_dssp HHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHCcC
Confidence 3468999999999976553
No 22
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=45.38 E-value=15 Score=33.73 Aligned_cols=14 Identities=36% Similarity=0.584 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 007232 300 RVATVVAHELAHQW 313 (612)
Q Consensus 300 ~~~~~iaHElaHqW 313 (612)
..+.++||||+|.+
T Consensus 135 ~~a~~~AHElGHnl 148 (214)
T 1r55_A 135 GAAATMAHEIGHSL 148 (214)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 35789999999996
No 23
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=41.87 E-value=27 Score=31.48 Aligned_cols=13 Identities=54% Similarity=0.774 Sum_probs=11.7
Q ss_pred HHHHHHHHHHHHH
Q 007232 301 VATVVAHELAHQW 313 (612)
Q Consensus 301 ~~~~iaHElaHqW 313 (612)
.+.++|||++|++
T Consensus 133 ~a~~~AHElGH~l 145 (197)
T 1bud_A 133 VAITLAHEMAHNL 145 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHhhhc
Confidence 6789999999996
No 24
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=41.82 E-value=25 Score=31.82 Aligned_cols=13 Identities=54% Similarity=0.808 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 007232 301 VATVVAHELAHQW 313 (612)
Q Consensus 301 ~~~~iaHElaHqW 313 (612)
.+.++||||+|+.
T Consensus 135 ~a~~~AHElGH~l 147 (202)
T 1yp1_A 135 MAVVMAHELGHNL 147 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 25
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=41.48 E-value=9.9 Score=31.87 Aligned_cols=27 Identities=22% Similarity=0.195 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHhcCccCccccc
Q 007232 297 NKQRVATVVAHELAHQWFGNLVTMEWWT 324 (612)
Q Consensus 297 ~~~~~~~~iaHElaHqWfGnlVt~~~w~ 324 (612)
-...+..++.||+||.+ |.|...+.|+
T Consensus 85 L~~~V~~tvvHEiaHhf-e~lag~~gls 111 (130)
T 2ejq_A 85 WEAEVWETMLHELRHHL-ESLAGRDDLV 111 (130)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHTTC---
T ss_pred HHHHHHHHHHHHhHHHH-HhhcccCCCC
Confidence 44568899999999986 4444444443
No 26
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=41.40 E-value=28 Score=31.49 Aligned_cols=14 Identities=50% Similarity=0.674 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 007232 300 RVATVVAHELAHQW 313 (612)
Q Consensus 300 ~~~~~iaHElaHqW 313 (612)
..+.++||||+|.+
T Consensus 135 ~~a~~~AHElGH~l 148 (202)
T 2w15_A 135 WVAVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 36789999999995
No 27
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=36.14 E-value=36 Score=34.92 Aligned_cols=14 Identities=43% Similarity=0.620 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHH
Q 007232 300 RVATVVAHELAHQW 313 (612)
Q Consensus 300 ~~~~~iaHElaHqW 313 (612)
..+.++||||+|++
T Consensus 145 ~~a~t~AHElGHnl 158 (427)
T 2ero_A 145 LVAIAMAHEMGHNL 158 (427)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 46789999999997
No 28
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=33.54 E-value=26 Score=31.72 Aligned_cols=13 Identities=38% Similarity=0.672 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 007232 301 VATVVAHELAHQW 313 (612)
Q Consensus 301 ~~~~iaHElaHqW 313 (612)
.+.++||||+|.+
T Consensus 136 ~a~~~AHElGHnl 148 (202)
T 1atl_A 136 MGVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred eEEEehhhhcccc
Confidence 6789999999995
No 29
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A
Probab=33.47 E-value=32 Score=33.36 Aligned_cols=31 Identities=16% Similarity=0.200 Sum_probs=20.8
Q ss_pred HHHHHhccCCCHHHHHHHHhcCCCceEEEEE
Q 007232 433 WAALEEGSGEPVNKLMNSWTKQKGYPVISVK 463 (612)
Q Consensus 433 ~~~l~~~~~~~l~~~~~~W~~~~g~P~l~v~ 463 (612)
+..|.+..|.....+..++..-..+|.+-|.
T Consensus 164 I~~LA~~FgVS~eav~~RL~~l~~~p~~~vv 194 (301)
T 3dte_A 164 LAELARRADVSATSALYALAERTAPPVIYAV 194 (301)
T ss_dssp HHHHHHHHTCCHHHHHHHHHHTCCSCEEEEE
T ss_pred HHHHHHHHCCCHHHHHHHHHhcCCCCEEEEE
Confidence 3345555677777788888887888865443
No 30
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=32.69 E-value=2e+02 Score=23.42 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=20.8
Q ss_pred EEEEEeCCccCCceEEEEEEEEeeec
Q 007232 87 ILVLEFAETLPTGMGVLAIGFEGVLN 112 (612)
Q Consensus 87 ~l~i~l~~~l~~g~~~l~i~y~g~~~ 112 (612)
...+.+++++.||.|+|+..+.|+..
T Consensus 81 ~f~~~w~~~~~pG~Ytl~a~l~~~~~ 106 (120)
T 3isy_A 81 DFSDVWKEVPEPGTYEVKVTFKGRAE 106 (120)
T ss_dssp EEEEEESSCCCSEEEEEEEEECCEET
T ss_pred EEEEEeCCCCCCccEEEEEEEEeeec
Confidence 44567777788999999999998764
No 31
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=32.43 E-value=28 Score=31.37 Aligned_cols=13 Identities=46% Similarity=0.721 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 007232 301 VATVVAHELAHQW 313 (612)
Q Consensus 301 ~~~~iaHElaHqW 313 (612)
.+.++|||++|++
T Consensus 135 ~a~~~AHElGH~l 147 (197)
T 1qua_A 135 MAVTMAHELGHNL 147 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 32
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=31.74 E-value=1.5e+02 Score=23.34 Aligned_cols=22 Identities=9% Similarity=0.098 Sum_probs=16.0
Q ss_pred ceEEEEEeCCccCCceEEEEEEE
Q 007232 85 DEILVLEFAETLPTGMGVLAIGF 107 (612)
Q Consensus 85 ~~~l~i~l~~~l~~g~~~l~i~y 107 (612)
...+.+.++ +|.+|.|+|.-+-
T Consensus 64 ~~~~~~~l~-~L~~G~YtV~Wrv 85 (102)
T 2c9r_A 64 KTMVITPAS-PLTAGTYKVDWRA 85 (102)
T ss_dssp TEEEEEESS-CCCSEEEEEEEEE
T ss_pred CcEEEEECC-CCCCceEEEEEEE
Confidence 456777775 8999999876543
No 33
>1kuf_A Atrolysin E, metalloproteinase; alpha/beta protein, hydrolase; 1.35A {Protobothrops mucrosquamatus} SCOP: d.92.1.9 PDB: 1kui_A 1kuk_A 1kug_A 1wni_A
Probab=30.92 E-value=26 Score=31.71 Aligned_cols=14 Identities=43% Similarity=0.629 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 007232 300 RVATVVAHELAHQW 313 (612)
Q Consensus 300 ~~~~~iaHElaHqW 313 (612)
..+.++||||+|.+
T Consensus 137 ~~a~~~AHElGH~l 150 (203)
T 1kuf_A 137 MVAVTMTHELGHNL 150 (203)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhHHHHHHHhhhhc
Confidence 36789999999995
No 34
>3k7n_A K-like; SVMP, hydrolase; HET: NAG FUC FUL; 2.30A {Naja atra}
Probab=29.58 E-value=52 Score=33.32 Aligned_cols=14 Identities=43% Similarity=0.688 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 007232 300 RVATVVAHELAHQW 313 (612)
Q Consensus 300 ~~~~~iaHElaHqW 313 (612)
..+.++||||+|..
T Consensus 138 ~~a~t~AHElGHnl 151 (397)
T 3k7n_A 138 LVASTITHELGHNL 151 (397)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHc
Confidence 46789999999985
No 35
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=29.29 E-value=1.6e+02 Score=23.21 Aligned_cols=22 Identities=14% Similarity=0.243 Sum_probs=16.1
Q ss_pred ceEEEEEeCCccCCceEEEEEEE
Q 007232 85 DEILVLEFAETLPTGMGVLAIGF 107 (612)
Q Consensus 85 ~~~l~i~l~~~l~~g~~~l~i~y 107 (612)
...+.+.++ +|++|.|+|.-+-
T Consensus 66 ~~~~~~~l~-~L~~G~YtV~Wrv 87 (104)
T 1lyq_A 66 KSMVIIPRE-PLPAGTYRVDWRA 87 (104)
T ss_dssp TEEEEEESS-CCCSEEEEEEEEE
T ss_pred CcEEEEECC-CCCCceEEEEEEE
Confidence 456777776 8999999876543
No 36
>2e3x_A Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=27.94 E-value=25 Score=36.05 Aligned_cols=14 Identities=43% Similarity=0.783 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 007232 300 RVATVVAHELAHQW 313 (612)
Q Consensus 300 ~~~~~iaHElaHqW 313 (612)
..+.++||||+|++
T Consensus 138 ~~a~t~AHElGHnl 151 (427)
T 2e3x_A 138 KTAVIMAHELSHNL 151 (427)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred eeeeehHHHHHHhh
Confidence 46789999999986
No 37
>4fca_A Conserved domain protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 2.06A {Bacillus anthracis}
Probab=27.51 E-value=42 Score=35.37 Aligned_cols=57 Identities=11% Similarity=0.156 Sum_probs=38.9
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHh--ccCCC---CHHHHHHHHHhccCCCHHHHHHHHh
Q 007232 396 ASVIRMLQNYLGAECFQRSLASYIKKY--ACSNA---KTEDLWAALEEGSGEPVNKLMNSWT 452 (612)
Q Consensus 396 ~~vl~mL~~~lG~~~F~~~l~~yl~~~--~~~~~---~~~df~~~l~~~~~~~l~~~~~~W~ 452 (612)
-.++..|+...|.+.|.+.-+.|=... ..... ..+.|...+++++|+||.+||+.|=
T Consensus 318 L~mf~QL~l~fG~~fy~~l~~~yR~~~~~~~p~~~~~k~~~fv~~~S~~ag~nLtpFFe~WG 379 (525)
T 4fca_A 318 LVMFWQLHLAYGDQFYPNLHQMYRLLHDTELPKSDEEKKQMFIYMTSKVAGQNLIPFFDKWG 379 (525)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHTCCGGGSCCSHHHHHHHHHHHHHHHHTSBCHHHHHHTT
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHhccccCCCCCcHHHHHHHHHHHHHHHCCChHHHHHHHC
Confidence 455677888889886666655554321 11111 2456788889999999999999993
No 38
>3k7l_A Atragin; SVMP, metalloprotease, hydrolase; HET: NAG; 2.50A {Naja atra}
Probab=27.33 E-value=52 Score=33.63 Aligned_cols=14 Identities=43% Similarity=0.629 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 007232 300 RVATVVAHELAHQW 313 (612)
Q Consensus 300 ~~~~~iaHElaHqW 313 (612)
..+.++||||+|..
T Consensus 143 ~~a~t~AHElGHnl 156 (422)
T 3k7l_A 143 MVAITMAHEMGHNL 156 (422)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhHHHHHHHHHHc
Confidence 46789999999985
No 39
>2dw0_A Catrocollastatin; apoptotic toxin, SVMP, metalloproteinase, apoptosis, toxin; HET: NAG BMA MAN GM6; 2.15A {Crotalus atrox} PDB: 2dw1_A* 2dw2_A* 3dsl_A* 3hdb_A*
Probab=26.83 E-value=34 Score=35.02 Aligned_cols=14 Identities=43% Similarity=0.710 Sum_probs=12.2
Q ss_pred HHHHHHHHHHHHHH
Q 007232 300 RVATVVAHELAHQW 313 (612)
Q Consensus 300 ~~~~~iaHElaHqW 313 (612)
..+.++||||+|.+
T Consensus 136 ~~a~t~AHElGHnl 149 (419)
T 2dw0_A 136 VVAVIMAHEMGHNL 149 (419)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred hhhhhHHHHHHHHc
Confidence 46789999999997
No 40
>3c0t_B Mediator of RNA polymerase II transcription subunit 8; beta barrel, channel, protein-protein complex, activator, nucleus; 2.40A {Schizosaccharomyces pombe}
Probab=23.42 E-value=63 Score=18.69 Aligned_cols=21 Identities=14% Similarity=0.265 Sum_probs=15.9
Q ss_pred hhhHHHHHHHHHHHHHhcCCC
Q 007232 566 ETDRFGILDDHFALCMARQQT 586 (612)
Q Consensus 566 ~~~r~~li~D~~~l~~~g~l~ 586 (612)
+.|--|++.|+..++.+|+-.
T Consensus 3 eqnanqmltdilsfmksgkra 23 (33)
T 3c0t_B 3 EQNANQMLTDILSFMKSGKRA 23 (33)
T ss_dssp --CHHHHHHHHHHHHHHCCCC
T ss_pred chhHHHHHHHHHHHHHcchHH
Confidence 345678999999999999753
No 41
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=22.99 E-value=49 Score=26.88 Aligned_cols=34 Identities=26% Similarity=0.451 Sum_probs=21.0
Q ss_pred ceeeecccccccCCCChHHHHHHHHHHHHHHHHHHH
Q 007232 278 LVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 313 (612)
Q Consensus 278 li~~~~~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 313 (612)
+++|+.. ++-- -.+.......+..++.||+||..
T Consensus 69 I~lYR~P-i~~~-~~~~~el~~~V~~vvvhEiahh~ 102 (114)
T 3e11_A 69 IIIYRNT-ICAL-CETESEVIDEVRKTVVHEIAHHF 102 (114)
T ss_dssp EEEEHHH-HHHT-CSSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEehHH-HHHH-hCChhHHHHHHHHHHHHHHHHHc
Confidence 5566655 2221 12333445568899999999985
No 42
>3lmc_A Peptidase, zinc-dependent; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, MUR16; 2.00A {Methanocorpusculum labreanum}
Probab=21.87 E-value=2.4e+02 Score=25.47 Aligned_cols=21 Identities=29% Similarity=0.408 Sum_probs=16.1
Q ss_pred ChHHHHHHHHHHHHHHHHHHH
Q 007232 293 SAAANKQRVATVVAHELAHQW 313 (612)
Q Consensus 293 ~~~~~~~~~~~~iaHElaHqW 313 (612)
.......++..+++||+.|.+
T Consensus 135 ~~~l~~~Rv~k~~~HElGH~l 155 (210)
T 3lmc_A 135 DDSALIDRIVKEGAHEIGHLF 155 (210)
T ss_dssp CHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHhc
Confidence 334456678899999999986
No 43
>3iuk_A Uncharacterized protein; PF05960.1, DUF885, M32 carboxypeptidase-like fold, PSI, MCSG structural genomics, protein structure initiative; 1.85A {Arthrobacter aurescens}
Probab=21.65 E-value=1.3e+02 Score=31.93 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=32.8
Q ss_pred hCHHHHHHHHHHHHHH------hccCCCCHHHHHHHHHhccCCCHHHHHHHHhcCCCceE
Q 007232 406 LGAECFQRSLASYIKK------YACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPV 459 (612)
Q Consensus 406 lG~~~F~~~l~~yl~~------~~~~~~~~~df~~~l~~~~~~~l~~~~~~W~~~~g~P~ 459 (612)
+.++.-..-+.+|+.. |+.+.....++.+..++..|.+++.|-+.-+.....|+
T Consensus 495 ~~~~~a~~ev~Ry~~~Pgqa~sY~~G~~~i~~lR~~a~~~lGfdlk~FHd~vL~~G~~Pl 554 (562)
T 3iuk_A 495 ISEGQLQFEFTRYLGWPGQAPSYKVGQRLWEQIRAELESREGFDLKSFHSKALNIGSVGL 554 (562)
T ss_dssp CCHHHHHHHHHHHHHSTTSTTHHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHTTCSCCH
T ss_pred CChHHHHHHHHHHHcCCcHHhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCH
Confidence 3455555667777642 22222344566666666678889888777766666663
No 44
>2ddf_A ADAM 17; hydrolase; HET: INN CIT; 1.70A {Homo sapiens} PDB: 2fv5_A* 3l0v_A* 3kme_A* 3l0t_A* 3kmc_A* 3le9_A* 3lea_A* 3lgp_A* 3o64_A* 3ewj_A* 3edz_A* 3e8r_A* 2fv9_A* 1zxc_A* 2oi0_A* 3b92_A* 2a8h_A* 1bkc_A* 3cki_A 1bkc_I* ...
Probab=20.99 E-value=42 Score=31.57 Aligned_cols=13 Identities=38% Similarity=0.690 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHH
Q 007232 301 VATVVAHELAHQW 313 (612)
Q Consensus 301 ~~~~iaHElaHqW 313 (612)
.+.++||||+|.+
T Consensus 182 ~a~~~AHElGHnl 194 (257)
T 2ddf_A 182 ADLVTTHELGHNF 194 (257)
T ss_dssp HHHHHHHHHHHHT
T ss_pred eeeeeeeehhhhc
Confidence 5678999999997
Done!