Query 007233
Match_columns 612
No_of_seqs 448 out of 2737
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 20:35:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007233.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007233hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xzw_A Purple acid phosphatase 100.0 1.4E-61 4.8E-66 527.6 41.1 386 165-594 21-423 (426)
2 2qfp_A Purple acid phosphatase 100.0 1.2E-60 4.2E-65 519.8 40.0 389 165-597 15-419 (424)
3 2yeq_A Apased, PHOD, alkaline 100.0 2.9E-34 1E-38 319.3 34.0 381 169-595 8-482 (527)
4 3tgh_A Glideosome-associated p 100.0 1E-34 3.5E-39 305.9 22.8 264 286-596 3-310 (342)
5 1ute_A Protein (II purple acid 100.0 6.4E-30 2.2E-34 263.9 18.8 265 285-596 5-306 (313)
6 3ib7_A ICC protein; metallopho 99.9 4.9E-22 1.7E-26 207.1 23.5 250 284-583 23-282 (330)
7 3d03_A Phosphohydrolase; glyce 99.9 3.1E-21 1E-25 195.5 22.8 242 287-578 1-253 (274)
8 2nxf_A Putative dimetal phosph 99.9 3.7E-21 1.3E-25 198.7 21.0 250 285-578 4-312 (322)
9 2xmo_A LMO2642 protein; phosph 99.7 2.2E-16 7.6E-21 171.8 25.0 216 284-506 37-288 (443)
10 1uf3_A Hypothetical protein TT 99.5 9E-13 3.1E-17 129.1 18.4 173 286-501 5-190 (228)
11 2yvt_A Hypothetical protein AQ 99.4 5.2E-12 1.8E-16 126.7 16.7 183 286-501 5-222 (260)
12 2q8u_A Exonuclease, putative; 99.3 1.7E-11 5.7E-16 128.6 15.0 259 285-590 17-289 (336)
13 1z2w_A Vacuolar protein sortin 99.3 3.9E-10 1.3E-14 108.6 20.0 181 286-592 10-191 (192)
14 3ck2_A Conserved uncharacteriz 99.2 2.1E-10 7.3E-15 108.8 17.9 165 287-590 7-172 (176)
15 1nnw_A Hypothetical protein; s 99.2 4.5E-11 1.5E-15 119.7 13.1 214 287-577 2-222 (252)
16 2a22_A Vacuolar protein sortin 99.2 1.8E-10 6.1E-15 113.2 17.1 190 286-592 25-215 (215)
17 3rl5_A Metallophosphoesterase 99.2 2.8E-10 9.5E-15 116.7 15.5 208 284-541 57-279 (296)
18 3tho_B Exonuclease, putative; 99.0 1.1E-09 3.7E-14 116.8 12.7 202 287-506 1-217 (379)
19 3av0_A DNA double-strand break 99.0 3.4E-09 1.2E-13 113.2 15.9 186 284-505 18-212 (386)
20 3rqz_A Metallophosphoesterase; 99.0 2.3E-09 7.8E-14 107.3 13.5 211 286-577 3-218 (246)
21 3qfm_A SAPH, putative uncharac 99.0 2.7E-09 9.2E-14 108.5 13.3 216 286-578 11-228 (270)
22 1s3l_A Hypothetical protein MJ 98.9 2.6E-08 9E-13 95.8 16.9 61 287-372 26-88 (190)
23 1xm7_A Hypothetical protein AQ 98.7 1.9E-08 6.6E-13 96.8 7.6 149 287-505 2-153 (195)
24 2kkn_A Uncharacterized protein 98.7 1.1E-07 3.6E-12 90.6 12.5 64 287-372 23-86 (178)
25 1ii7_A MRE11 nuclease; RAD50, 98.7 3.4E-07 1.1E-11 95.6 16.9 82 287-372 1-88 (333)
26 4fbw_A DNA repair protein RAD3 98.6 4.1E-06 1.4E-10 89.8 24.0 258 284-592 11-317 (417)
27 3t1i_A Double-strand break rep 98.6 2.6E-07 8.9E-12 99.5 14.4 87 283-372 29-152 (431)
28 4fbk_A DNA repair and telomere 98.6 1.5E-06 5.1E-11 94.0 20.2 86 284-372 74-196 (472)
29 1hp1_A 5'-nucleotidase; metall 98.1 7.7E-06 2.6E-10 90.5 10.8 200 286-504 8-232 (516)
30 2z1a_A 5'-nucleotidase; metal- 98.1 1.9E-05 6.4E-10 88.2 13.9 189 285-505 28-244 (552)
31 3qfk_A Uncharacterized protein 98.0 0.00019 6.7E-09 79.4 19.7 205 285-504 18-252 (527)
32 3ztv_A NAD nucleotidase, NADN; 97.8 0.00011 3.7E-09 82.4 13.9 192 284-504 10-231 (579)
33 2z06_A Putative uncharacterize 97.8 0.00029 9.9E-09 70.2 15.0 170 287-504 1-175 (252)
34 4h2g_A 5'-nucleotidase; dimer, 97.8 4.8E-05 1.7E-09 84.7 10.4 191 285-504 24-245 (546)
35 3ive_A Nucleotidase; structura 97.8 0.00014 4.8E-09 80.3 13.4 203 286-503 6-237 (509)
36 2wdc_A SOXB, sulfur oxidation 97.7 0.00033 1.1E-08 78.2 15.1 42 327-373 123-168 (562)
37 1su1_A Hypothetical protein YF 97.6 8.1E-05 2.8E-09 72.2 7.2 82 268-372 13-101 (208)
38 1t70_A Phosphatase; crystal, X 97.5 0.0013 4.4E-08 65.7 14.9 172 287-504 1-178 (255)
39 1t71_A Phosphatase, conserved 97.4 0.0016 5.5E-08 65.9 13.7 172 286-504 4-188 (281)
40 2ede_A Netrin receptor DCC; tu 97.4 0.0016 5.4E-08 55.7 11.3 99 167-283 10-111 (114)
41 3c9f_A 5'-nucleotidase; 2',3'- 97.2 0.0019 6.3E-08 72.0 12.9 86 284-373 13-108 (557)
42 2dju_A Receptor-type tyrosine- 97.2 0.0026 8.8E-08 53.4 10.8 92 166-280 8-100 (106)
43 1qr4_A Protein (tenascin); fib 97.2 0.014 4.7E-07 54.1 16.9 120 130-280 59-185 (186)
44 3n06_B PRL-R, prolactin recept 97.2 0.008 2.7E-07 57.2 15.5 93 165-279 102-204 (210)
45 1x5l_A Ephrin type-A receptor 97.2 0.00097 3.3E-08 56.7 7.9 97 165-283 10-108 (111)
46 1x4y_A Biregional cell adhesio 97.1 0.0049 1.7E-07 52.8 12.0 42 241-282 69-110 (114)
47 2ibg_A CG9211-PA, GH03927P; IH 97.1 0.018 6.2E-07 54.4 17.1 135 124-279 65-212 (214)
48 2edd_A Netrin receptor DCC; tu 97.1 0.0023 7.9E-08 56.3 9.8 93 166-280 19-117 (123)
49 1x5z_A Receptor-type tyrosine- 97.1 0.002 6.9E-08 55.0 9.0 93 166-281 18-110 (115)
50 2crz_A Fibronectin type-III do 97.0 0.002 7E-08 54.8 8.6 95 165-281 8-105 (110)
51 3p4l_A Neogenin; iron homeosta 97.0 0.012 4.1E-07 55.7 14.6 94 168-279 108-204 (211)
52 4h1s_A 5'-nucleotidase; hydrol 97.0 0.017 5.7E-07 63.8 17.7 75 407-504 135-223 (530)
53 1g5b_A Serine/threonine protei 96.9 0.00077 2.6E-08 65.6 5.5 64 287-372 13-79 (221)
54 1x5f_A Neogenin; RGM binding, 96.9 0.0059 2E-07 52.5 10.6 95 165-280 17-114 (120)
55 2haz_A N-CAM 1, neural cell ad 96.9 0.0014 4.8E-08 55.6 6.4 39 241-279 66-104 (105)
56 2dm4_A Sortilin-related recept 96.9 0.0063 2.1E-07 51.5 10.6 91 166-279 8-101 (108)
57 2djs_A Ephrin type-B receptor 96.9 0.0026 9E-08 53.8 8.1 94 165-281 7-103 (108)
58 1x5x_A Fibronectin type-III do 96.9 0.0023 7.8E-08 54.4 7.6 92 166-280 8-103 (109)
59 2edy_A Receptor-type tyrosine- 96.8 0.0014 4.9E-08 54.7 5.8 38 242-279 65-102 (103)
60 2crm_A Fibronectin type-III do 96.8 0.0017 5.9E-08 56.2 6.3 94 165-280 17-114 (120)
61 2db8_A Tripartite motif protei 96.8 0.0016 5.5E-08 55.9 5.8 41 242-282 66-106 (110)
62 1x5j_A Neogenin; RGM binding, 96.8 0.0026 9E-08 55.0 7.0 93 166-280 9-107 (113)
63 1bqu_A Protein (GP130); cytoki 96.8 0.016 5.5E-07 54.9 13.3 97 165-279 103-205 (215)
64 3gve_A YFKN protein; alpha-bet 96.7 0.015 5.2E-07 60.5 13.9 49 447-504 206-254 (341)
65 2e7h_A Ephrin type-B receptor 96.7 0.0069 2.3E-07 51.4 9.3 95 166-281 8-104 (109)
66 2ee2_A Contactin-1; neural cel 96.7 0.0088 3E-07 51.5 9.8 95 168-282 21-115 (119)
67 1x5g_A Neogenin; RGM binding, 96.7 0.0059 2E-07 52.1 8.5 91 166-280 18-110 (116)
68 1x4x_A Fibronectin type-III do 96.6 0.0066 2.3E-07 51.4 8.6 40 242-281 62-101 (106)
69 2dfj_A Diadenosinetetraphospha 96.6 0.0027 9.2E-08 64.4 6.5 65 288-372 2-69 (280)
70 1wfo_A Sidekick 2; FN3, cell a 96.6 0.01 3.5E-07 51.8 9.5 96 165-280 27-124 (130)
71 2kbg_A N-CAM 2, neural cell ad 96.5 0.005 1.7E-07 53.7 7.2 82 178-280 19-102 (114)
72 2ed7_A Netrin receptor DCC; tu 96.5 0.01 3.6E-07 50.7 9.3 93 165-280 17-113 (119)
73 3jyf_A 2',3'-cyclic nucleotide 96.5 0.11 3.6E-06 54.0 18.2 47 447-504 200-247 (339)
74 1va9_A DOWN syndrome cell adhe 96.5 0.019 6.5E-07 49.2 10.5 96 168-280 18-117 (122)
75 2ed8_A Netrin receptor DCC; tu 96.4 0.021 7E-07 47.9 10.3 91 166-280 8-100 (106)
76 2qjc_A Diadenosine tetraphosph 96.4 0.0033 1.1E-07 63.0 6.0 64 287-372 19-85 (262)
77 2jll_A NCAM2, neural cell adhe 96.4 0.057 1.9E-06 55.7 15.7 40 241-281 349-388 (389)
78 1x3d_A Fibronectin type-III do 96.4 0.017 6E-07 49.4 9.9 91 165-280 17-112 (118)
79 2dle_A Receptor-type tyrosine- 96.3 0.026 8.7E-07 48.1 10.2 41 241-282 59-99 (104)
80 1x4z_A Biregional cell adhesio 96.3 0.015 5E-07 50.3 8.7 97 164-280 16-116 (121)
81 2e3v_A Neural cell adhesion mo 96.3 0.025 8.6E-07 49.1 10.2 39 242-280 68-106 (122)
82 2ed9_A Netrin receptor DCC; tu 96.3 0.011 3.9E-07 51.0 8.0 89 168-279 31-123 (124)
83 1cd9_B G-CSF-R, protein (G-CSF 96.3 0.046 1.6E-06 51.9 13.0 132 125-279 64-213 (215)
84 2dn7_A Receptor-type tyrosine- 96.2 0.02 6.8E-07 48.0 9.0 90 166-279 8-99 (107)
85 1wfu_A Unnamed protein product 96.2 0.0068 2.3E-07 53.3 6.2 40 242-281 76-115 (120)
86 2dmk_A Midline 2 isoform 2; mi 96.2 0.0089 3.1E-07 52.6 6.9 97 165-280 15-118 (127)
87 2vkw_A Neural cell adhesion mo 96.2 0.0091 3.1E-07 56.5 7.5 97 165-280 8-107 (209)
88 2gee_A Hypothetical protein; f 96.2 0.12 4E-06 48.7 15.3 107 130-262 78-189 (203)
89 1k85_A Chitinase A1; fibronect 96.1 0.03 1E-06 45.4 9.4 84 166-277 4-88 (88)
90 2rb8_A Tenascin; beta sheet,lo 96.1 0.026 8.9E-07 47.6 9.3 93 166-281 3-95 (104)
91 3p4l_A Neogenin; iron homeosta 96.1 0.038 1.3E-06 52.1 11.5 92 167-280 6-103 (211)
92 2z72_A Protein-tyrosine-phosph 96.1 0.0068 2.3E-07 63.2 6.6 68 287-372 71-153 (342)
93 3r8q_A Fibronectin; heparin, F 96.1 0.11 3.8E-06 51.4 15.3 102 165-294 112-215 (290)
94 2edx_A Protein tyrosine phosph 96.1 0.022 7.4E-07 49.7 8.8 41 240-280 78-118 (134)
95 1x5h_A Neogenin; RGM binding, 96.0 0.018 6.1E-07 50.3 8.1 42 239-280 75-116 (132)
96 2yuw_A Myosin binding protein 96.0 0.019 6.5E-07 48.6 8.0 84 166-271 8-95 (110)
97 1bpv_A Titin, A71, connectin; 96.0 0.025 8.6E-07 48.7 8.8 92 166-278 11-106 (112)
98 3f7q_A Integrin beta-4, GP150; 95.9 0.11 3.8E-06 49.9 14.2 100 165-280 98-200 (234)
99 2yrz_A Integrin beta-4; GP150, 95.9 0.016 5.4E-07 49.6 7.2 39 241-279 73-112 (118)
100 3l5i_A Interleukin-6 receptor 95.9 0.096 3.3E-06 51.8 14.1 38 241-279 253-290 (290)
101 2d9q_B Granulocyte colony-stim 95.9 0.046 1.6E-06 55.2 11.8 132 125-279 158-307 (313)
102 1x5a_A Ephrin type-A receptor 95.8 0.013 4.6E-07 49.8 6.2 41 243-283 64-104 (107)
103 2dkm_A Collagen alpha-1(XX) ch 95.8 0.044 1.5E-06 46.1 9.5 92 165-280 8-99 (104)
104 2dbj_A Proto-oncogene tyrosine 95.8 0.023 7.8E-07 49.4 7.8 40 241-280 79-118 (124)
105 3r8q_A Fibronectin; heparin, F 95.8 0.25 8.6E-06 48.8 16.6 76 165-262 201-276 (290)
106 1tdq_A Tenascin-R; extracellul 95.8 0.33 1.1E-05 47.6 17.4 105 165-294 104-210 (283)
107 2dlh_A Receptor-type tyrosine- 95.8 0.037 1.3E-06 47.2 9.1 40 241-280 76-115 (121)
108 3fl7_A Ephrin receptor; ATP-bi 95.8 0.03 1E-06 61.8 10.3 129 128-281 399-535 (536)
109 1uem_A KIAA1568 protein; immun 95.8 0.015 5.3E-07 49.5 6.4 94 165-280 15-112 (117)
110 3n1f_C Cell adhesion molecule- 95.7 0.054 1.8E-06 45.5 9.5 91 168-277 7-101 (102)
111 1wis_A KIAA1514 protein; FNIII 95.7 0.029 9.9E-07 48.8 7.9 98 165-281 17-120 (124)
112 1axi_B HGHBP, growth hormone r 95.7 0.069 2.4E-06 52.2 11.5 92 165-278 130-234 (236)
113 1fnf_A Fibronectin; RGD, extra 95.6 0.27 9.3E-06 50.2 16.5 85 165-271 275-359 (368)
114 1wk0_A KIAA0970 protein; fibro 95.6 0.028 9.5E-07 50.6 7.7 40 241-280 82-121 (137)
115 1i1r_A GP130, interleukin-6 re 95.6 0.049 1.7E-06 54.7 10.4 97 165-279 199-301 (303)
116 2cuh_A Tenascin-X; fibronectin 95.6 0.055 1.9E-06 46.3 9.2 91 165-280 7-97 (115)
117 3v6o_A Leptin receptor; recept 95.6 0.054 1.8E-06 51.6 10.1 124 126-272 68-198 (206)
118 2ie4_C PP2A-alpha;, serine/thr 95.6 0.015 5E-07 59.8 6.3 68 287-372 50-121 (309)
119 1wf5_A Sidekick 2 protein; FNI 95.6 0.042 1.4E-06 47.0 8.4 94 165-280 17-116 (121)
120 1uc6_A CNTF receptor, ciliary 95.5 0.054 1.8E-06 46.0 8.9 85 164-271 6-96 (109)
121 2ee3_A Collagen alpha-1(XX) ch 95.5 0.088 3E-06 45.0 10.1 91 167-281 9-99 (108)
122 1ujt_A KIAA1568 protein; fibro 95.4 0.13 4.4E-06 44.9 11.1 41 240-280 74-114 (120)
123 3b83_A Ten-D3; beta sheet, com 95.4 0.1 3.6E-06 43.4 10.1 75 166-262 2-76 (100)
124 3f7q_A Integrin beta-4, GP150; 95.4 0.084 2.9E-06 50.8 10.8 106 166-294 6-112 (234)
125 3icf_A PPT, serine/threonine-p 95.4 0.03 1E-06 58.0 7.8 69 286-372 63-136 (335)
126 3lpw_A A77-A78 domain from tit 95.3 0.072 2.5E-06 49.0 9.8 78 165-265 102-182 (197)
127 2cum_A Tenascin-X; hexabrachio 95.3 0.11 3.8E-06 43.7 10.1 91 165-280 7-97 (105)
128 1fjm_A Protein serine/threonin 95.3 0.021 7E-07 59.2 6.3 67 288-372 58-128 (330)
129 1uey_A KIAA0343 protein; immun 95.3 0.033 1.1E-06 48.3 6.7 37 244-280 77-114 (127)
130 2vkw_A Neural cell adhesion mo 95.2 0.14 4.8E-06 48.0 11.7 91 165-277 109-201 (209)
131 1cfb_A Drosophila neuroglian; 95.2 0.047 1.6E-06 51.2 8.3 94 165-280 5-102 (205)
132 1uen_A KIAA0343 protein; immun 95.2 0.067 2.3E-06 45.9 8.4 40 241-280 80-119 (125)
133 2gee_A Hypothetical protein; f 95.1 0.15 5.1E-06 48.0 11.5 103 168-294 25-127 (203)
134 1x5y_A Myosin binding protein 95.1 0.059 2E-06 45.5 7.8 86 165-271 8-96 (111)
135 2cui_A Tenascin-X; fibronectin 95.1 0.13 4.3E-06 44.4 9.8 89 174-281 15-109 (112)
136 1v5j_A KIAA1355 protein, RSGI 95.0 0.046 1.6E-06 46.9 6.7 93 166-280 8-102 (108)
137 3h63_A Serine/threonine-protei 94.9 0.051 1.8E-06 55.8 8.0 68 287-372 60-132 (315)
138 2b5i_B Interleukin-2 receptor 94.9 0.15 5.1E-06 49.1 10.8 95 166-280 106-208 (214)
139 3lpw_A A77-A78 domain from tit 94.8 0.12 4E-06 47.6 9.6 108 165-294 5-116 (197)
140 3mpc_A FN3-like protein; fibro 94.8 0.09 3.1E-06 44.6 8.0 90 165-278 4-94 (103)
141 3e7a_A PP-1A, serine/threonine 94.8 0.037 1.3E-06 56.4 6.3 67 288-372 57-127 (299)
142 3mtr_A N-CAM-1, NCAM-1, neural 94.7 0.13 4.5E-06 48.3 9.9 42 241-282 173-214 (215)
143 3up1_A Interleukin-7 receptor 94.6 0.32 1.1E-05 47.3 12.4 95 165-280 112-215 (223)
144 1zlg_A Anosmin 1; insulin-like 94.6 0.86 2.9E-05 51.5 17.9 42 239-280 332-376 (680)
145 2yux_A Myosin-binding protein 94.6 0.034 1.1E-06 48.0 4.8 76 165-262 17-95 (120)
146 2ic2_A CG9211-PA, GH03927P; IH 94.6 0.19 6.5E-06 43.2 9.6 23 239-261 69-91 (115)
147 1fnf_A Fibronectin; RGD, extra 94.5 0.11 3.6E-06 53.4 9.4 93 166-280 2-94 (368)
148 3teu_A Fibcon; FN3 domain, fib 94.5 0.15 5.2E-06 41.9 8.6 88 167-279 3-90 (98)
149 1wfn_A Sidekick 2; FN3, cell a 94.4 0.18 6.2E-06 42.9 9.3 88 165-273 17-106 (119)
150 3ll8_A Serine/threonine-protei 94.4 0.047 1.6E-06 56.9 6.3 67 288-372 71-141 (357)
151 1n26_A IL-6 receptor alpha cha 94.4 0.19 6.4E-06 51.1 10.9 92 165-277 196-295 (325)
152 1eer_B Epobp, erythropoietin r 94.4 0.14 4.8E-06 49.4 9.3 94 165-278 121-222 (227)
153 1wao_1 Serine/threonine protei 94.3 0.081 2.8E-06 57.4 8.1 68 287-372 213-285 (477)
154 2ha1_A Fibronectin; beta sandw 94.2 0.18 6.3E-06 47.0 9.5 91 168-279 2-93 (201)
155 1qr4_A Protein (tenascin); fib 94.2 0.24 8.2E-06 45.5 10.1 90 165-281 6-97 (186)
156 1aui_A Calcineurin, serine/thr 94.1 0.052 1.8E-06 59.1 6.0 24 479-502 261-284 (521)
157 1j8k_A Fibronectin; EDA, TYPEI 94.0 0.25 8.5E-06 40.2 8.8 73 168-262 4-76 (94)
158 1oww_A FN, fibronectin first t 94.0 0.27 9.2E-06 40.6 8.6 84 168-277 7-96 (98)
159 3e0g_A Leukemia inhibitory fac 93.8 0.48 1.6E-05 51.5 13.1 133 126-279 341-481 (483)
160 2qbw_A PDZ-fibronectin fusion 93.7 0.29 1E-05 46.0 10.0 89 167-277 105-193 (195)
161 2ocf_D Fibronectin; estrogen r 93.5 0.23 7.9E-06 43.1 8.2 74 166-261 29-102 (121)
162 1x5i_A Neogenin; RGM binding, 93.4 0.22 7.5E-06 43.3 7.8 90 166-280 28-119 (126)
163 2q7n_A Leukemia inhibitory fac 93.3 0.24 8.1E-06 54.0 9.5 133 125-280 345-487 (488)
164 3tgx_A Interleukin-21 receptor 93.2 0.38 1.3E-05 46.2 9.9 97 165-280 100-209 (219)
165 2ibg_A CG9211-PA, GH03927P; IH 93.1 0.33 1.1E-05 45.5 9.2 95 166-271 2-100 (214)
166 3t1w_A Four-domain fibronectin 93.1 0.35 1.2E-05 49.6 10.2 105 167-294 4-109 (375)
167 3l5i_A Interleukin-6 receptor 93.0 2.8 9.7E-05 40.9 16.3 136 137-294 71-210 (290)
168 3l5h_A Interleukin-6 receptor 92.9 0.16 5.5E-06 55.8 7.6 98 165-280 198-301 (589)
169 3tes_A Tencon; fibronectin typ 92.8 0.25 8.5E-06 41.0 7.0 71 169-261 5-75 (98)
170 3k2m_C Monobody HA4; engineere 92.7 0.52 1.8E-05 39.1 8.9 75 167-262 6-81 (101)
171 3qwq_B Adnectin; cell surface 92.5 0.39 1.3E-05 41.2 7.9 74 166-261 4-77 (114)
172 1tdq_A Tenascin-R; extracellul 92.3 0.74 2.5E-05 45.0 10.9 105 165-294 14-118 (283)
173 2w1n_A O-GLCNACASE NAGJ; hexos 92.2 0.41 1.4E-05 46.1 8.3 36 243-278 202-237 (238)
174 3t04_D Monobody 7C12; engineer 92.1 0.39 1.3E-05 40.1 7.4 75 166-261 8-84 (103)
175 2lfe_A E3 ubiquitin-protein li 92.1 1.7 6E-05 37.6 11.1 103 39-166 29-138 (138)
176 2ha1_A Fibronectin; beta sandw 91.8 5.1 0.00017 36.8 15.7 23 240-262 164-186 (201)
177 2edb_A Netrin receptor DCC; tu 91.7 0.43 1.5E-05 40.7 7.3 74 165-262 17-92 (116)
178 3qht_C Monobody YSMB-1; fibron 91.6 0.31 1.1E-05 40.1 6.0 74 166-261 5-78 (97)
179 3t1w_A Four-domain fibronectin 91.0 2.2 7.5E-05 43.5 13.2 94 165-280 186-279 (375)
180 1wj3_A KIAA1496 protein; beta 90.3 0.53 1.8E-05 40.3 6.5 37 242-279 74-110 (117)
181 1cfb_A Drosophila neuroglian; 90.0 0.85 2.9E-05 42.4 8.3 38 241-278 164-202 (205)
182 2ekj_A Collagen alpha-1(XX) ch 89.9 0.18 6.1E-06 42.3 3.1 76 165-262 7-82 (105)
183 2v5y_A Receptor-type tyrosine- 89.7 3.9 0.00013 46.2 15.0 95 167-279 361-459 (731)
184 3csg_A MBP, maltose-binding pr 89.7 0.52 1.8E-05 50.4 7.3 75 167-262 371-445 (461)
185 2b5i_C Cytokine receptor commo 89.6 0.69 2.4E-05 43.5 7.3 91 165-278 98-194 (199)
186 2h41_A Fibronectin; beta sandw 89.4 0.33 1.1E-05 40.5 4.3 62 179-261 18-79 (95)
187 3e0j_A DNA polymerase subunit 89.3 1 3.5E-05 48.6 9.0 143 285-443 199-378 (476)
188 3bpo_C Interleukin-13 receptor 89.0 1.1 3.6E-05 45.1 8.7 104 165-278 199-311 (314)
189 2jll_A NCAM2, neural cell adhe 89.0 3 0.0001 42.4 12.3 93 165-280 195-291 (389)
190 2gys_A Cytokine receptor commo 88.8 8.5 0.00029 40.2 15.9 106 165-292 108-227 (419)
191 2erj_C Cytokine receptor commo 88.4 1.3 4.6E-05 43.4 8.6 93 165-280 136-234 (247)
192 1iar_B Protein (interleukin-4 87.1 1.1 3.6E-05 42.6 6.8 97 165-280 97-201 (207)
193 3s98_A Interferon alpha/beta r 87.0 3.7 0.00013 41.2 11.3 39 241-279 159-199 (306)
194 2v5y_A Receptor-type tyrosine- 86.7 1.9 6.6E-05 48.7 9.9 133 129-280 422-564 (731)
195 4go6_B HCF C-terminal chain 1; 86.3 3.1 0.00011 39.8 9.9 35 245-279 167-201 (232)
196 3se4_A Interferon alpha/beta r 85.8 7 0.00024 40.8 13.1 39 241-279 163-203 (414)
197 1zlg_A Anosmin 1; insulin-like 85.1 5.7 0.0002 44.7 12.7 53 238-291 591-644 (680)
198 3fl7_A Ephrin receptor; ATP-bi 83.9 4.3 0.00015 44.5 10.6 42 240-281 399-443 (536)
199 3lqm_A Interleukin-10 receptor 83.4 2.6 8.7E-05 39.6 7.5 39 242-280 156-196 (201)
200 2gys_A Cytokine receptor commo 82.9 4.1 0.00014 42.7 9.7 37 241-277 377-418 (419)
201 1q38_A Fibronectin; amyloid fi 82.6 0.72 2.5E-05 37.0 2.6 39 237-278 34-74 (89)
202 2dtg_E Insulin receptor; IR ec 81.7 2.1 7.1E-05 50.1 7.4 40 241-280 549-593 (897)
203 3uto_A Twitchin; kinase, muscl 81.5 2.7 9.2E-05 46.5 7.8 73 165-261 9-85 (573)
204 4go6_B HCF C-terminal chain 1; 81.4 1.4 4.9E-05 42.3 5.0 38 242-279 47-84 (232)
205 2dtg_E Insulin receptor; IR ec 80.8 0.89 3E-05 53.2 3.8 41 242-283 852-892 (897)
206 1bqu_A Protein (GP130); cytoki 74.4 5.6 0.00019 36.8 6.8 89 166-277 8-98 (215)
207 3l5h_A Interleukin-6 receptor 72.0 5.9 0.0002 43.0 7.2 80 180-278 413-492 (589)
208 4doh_R Interleukin-20 receptor 71.6 4.8 0.00016 38.5 5.6 40 241-280 173-214 (221)
209 2uvf_A Exopolygalacturonase; G 69.7 6.3 0.00022 43.9 6.7 106 165-280 34-153 (608)
210 3lb6_C IL-13, interleukin-13 r 68.4 1.8 6.2E-05 45.1 1.9 38 243-280 292-336 (380)
211 4doh_B Interleukin-20 receptor 67.5 5.3 0.00018 37.7 4.9 84 172-279 115-200 (206)
212 1su1_A Hypothetical protein YF 66.0 14 0.00047 34.8 7.5 63 491-590 143-205 (208)
213 1cd9_B G-CSF-R, protein (G-CSF 64.2 40 0.0014 30.9 10.4 98 166-277 5-103 (215)
214 2nzi_A Titin; IG-domain, FNIII 63.7 16 0.00053 35.4 7.7 83 165-271 198-284 (305)
215 1i1r_A GP130, interleukin-6 re 60.8 13 0.00044 36.5 6.5 75 165-261 103-179 (303)
216 3d85_D IL-12B, interleukin-12 57.7 18 0.00061 36.2 7.0 85 164-273 211-301 (306)
217 3flo_A DNA polymerase alpha su 54.0 25 0.00084 37.6 7.5 78 285-372 146-247 (460)
218 3n06_B PRL-R, prolactin recept 53.1 65 0.0022 29.3 9.7 94 166-278 4-98 (210)
219 3se4_A Interferon alpha/beta r 47.8 96 0.0033 31.8 11.0 37 243-279 269-306 (414)
220 3b4n_A Endo-pectate lyase; pec 46.6 32 0.0011 34.9 6.5 21 245-265 75-95 (344)
221 4a2l_A BT_4663, two-component 46.1 49 0.0017 37.4 9.0 39 238-279 741-782 (795)
222 1g5b_A Serine/threonine protei 45.3 8.5 0.00029 36.4 2.0 16 489-504 176-191 (221)
223 3lb6_C IL-13, interleukin-13 r 44.4 2.1E+02 0.0071 29.1 12.8 28 165-192 31-58 (380)
224 3s98_A Interferon alpha/beta r 35.8 1.6E+02 0.0053 28.9 9.9 37 243-279 265-302 (306)
225 2d9q_B Granulocyte colony-stim 34.5 3.2E+02 0.011 26.3 13.9 100 165-278 98-198 (313)
226 3qt2_A Interleukin-5 receptor 33.9 74 0.0025 31.9 7.1 72 165-262 220-294 (317)
227 3ott_A Two-component system se 26.9 1.4E+02 0.0047 33.4 8.5 29 240-271 709-737 (758)
228 3v9f_A Two-component system se 24.0 67 0.0023 36.2 5.2 44 233-279 730-776 (781)
229 1noa_A Neocarzinostatin; antib 20.7 88 0.003 26.6 3.8 35 44-81 2-36 (113)
No 1
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=100.00 E-value=1.4e-61 Score=527.60 Aligned_cols=386 Identities=24% Similarity=0.401 Sum_probs=308.5
Q ss_pred CCCCCcceeeecCCCC-CcEEEEEEeC-CCCCCCccEEEEeecCCCCcccc-CcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTW-NEMTVTWTSG-YGINEAEAFVQWGRKGGDRTHSP-AGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~-~~m~V~W~t~-~~~~~~~~~V~yg~~~~~~~~~~-~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
++++|+|+||++++++ ++|+|+|+|. .. ++.+.|+||++++.....+ +.+.+|...+ ..++++|
T Consensus 21 ~~~~p~~v~l~~~~~~~~~~~v~W~t~~~~--~~~~~V~y~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~ 87 (426)
T 1xzw_A 21 GYNAPQQVHITQGDYEGRGVIISWTTPYDK--AGANKVFYWSENSKSQKRAMGTVVTYKYYN-----------YTSAFIH 87 (426)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSCC--TTTTEEEEEETTCCCCEEEECEEECCEETT-----------EECCEEE
T ss_pred CCCCCceEEEEECCCCCCeEEEEEEeCCCC--CCCCEEEEecCCCCCceEEEEEEEEEEecC-----------CcCCEEE
Confidence 5679999999999984 9999999997 43 4678999998776544333 2223333211 2468999
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHH
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLI 321 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~ 321 (612)
+|+|+||+|||+|+|||+.. .||+.++|+|+|.++...++||+++||+|... ....+++++.
T Consensus 88 ~v~l~gL~p~t~Y~Yrv~~g------~~s~~~~f~T~p~~~~~~~~~f~~~gD~~~~~------------~~~~~l~~i~ 149 (426)
T 1xzw_A 88 HCTIKDLEYDTKYYYRLGFG------DAKRQFWFVTPPKPGPDVPYVFGLIGDIGQTH------------DSNTTLTHYE 149 (426)
T ss_dssp EEEECCCCTTCEEEEEECCG------GGCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHH
T ss_pred EEEECCCCCCCEEEEEECCC------CccceeEEECCCCCCCCCCeEEEEEEeCCCCC------------chHHHHHHHH
Confidence 99999999999999999862 48999999999987777889999999998641 1245677776
Q ss_pred HhcCCccEEEEeCcccccCCc----hhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceee
Q 007233 322 QDLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMF 397 (612)
Q Consensus 322 ~~~~~pDfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f 397 (612)
+...+||||||+||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... . ...+....+..+|
T Consensus 150 ~~~~~~D~vl~~GD~~y~~~~~~~~~~~~~~~~~~l~~l~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f 222 (426)
T 1xzw_A 150 QNSAKGQAVLFMGDLSYSNRWPNHDNNRWDTWGRFSERSVAYQPWIWTAGNHEIDYAPD---I----GEYQPFVPFTNRY 222 (426)
T ss_dssp HCTTCCSEEEECSCCCCGGGSGGGCTHHHHHHHHHHHHHHTTSCEECCCCGGGCCCBGG---G----TBCSTTHHHHHHS
T ss_pred hCCCCCCEEEeCCChhhcccCCcccchHHHHHHHHHHHHHhcCCEEEeccccccccCCc---c----ccccCChhheEEE
Confidence 643489999999999998765 5679999999999988999999999999864210 0 0012224567788
Q ss_pred ecCCC---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCC
Q 007233 398 YVPAE---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSF 474 (612)
Q Consensus 398 ~~P~~---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~ 474 (612)
.||.+ ...+.||+|++|+++||+|||+.++..+.+|++||+++|++++|++++|+||++|+|+ |++..++..++
T Consensus 223 ~~p~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~Iv~~H~P~-~~~~~~~~~~~-- 299 (426)
T 1xzw_A 223 PTPHEASGSGDPLWYAIKRASAHIIVLSSYSGFVKYSPQYKWFTSELEKVNRSETPWLIVLVHAPL-YNSYEAHYMEG-- 299 (426)
T ss_dssp CCCCGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT--
T ss_pred eCCcccCCCCCCCeEEEEECCEEEEEeeCcccCCCCHHHHHHHHHHHHhhhhcCCCEEEEEeccCc-eeCCCcccCCC--
Confidence 89853 2457899999999999999999887778999999999999987778999999999999 77654322222
Q ss_pred CchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccC--CCccccCCCCceEEEEeCCCCCCC--C-CCCCCCC
Q 007233 475 AEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNK--EKNYYKGTLNGTIHVVAGGGGAGL--A-EFTPLQT 549 (612)
Q Consensus 475 ~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~--~~~~y~~~~~g~vyiv~G~gG~~l--~-~~~~~~~ 549 (612)
+.+ |+.|+++|++++||++|+||+|.|||++|++++++... ....| .+.+|++||++|+||+.. . .+..++|
T Consensus 300 -~~~-r~~l~~ll~~~~VdlvlsGH~H~~~r~~p~~~~~~~~~~g~~~~~-~~~~g~~yi~~G~gG~~~~~~~~~~~~~p 376 (426)
T 1xzw_A 300 -EAM-RAIFEPYFVYYKVDIVFSGHVHSYERSERVSNVAYNIVNAKCTPV-SDESAPVYITIGDGGNSEGLASEMTQPQP 376 (426)
T ss_dssp -HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSTTCCCCCE-ECTTSCEEEEECCSCCTTCCCCCBCSSCC
T ss_pred -HHH-HHHHHHHHHHhCCCEEEEcChhhheeeeeecCccccccCCccccc-cCCCccEEEEeCCCccccccccccCCCCC
Confidence 345 89999999999999999999999999999998764211 11122 136799999999999763 2 4556788
Q ss_pred CcceeeeCceeEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEeCC
Q 007233 550 TWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK--VYDSFRISRDY 594 (612)
Q Consensus 550 ~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~--v~D~f~i~k~~ 594 (612)
+|++|+..+|||++|++.|+++|.++|+++.||+ |+|+|||.|.+
T Consensus 377 ~~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~dg~~~~~D~~~i~~~~ 423 (426)
T 1xzw_A 377 SYSAFREASFGHGIFDIKNRTHAHFSWHRNQDGASVEADSLWLLNRY 423 (426)
T ss_dssp TTEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECSC
T ss_pred CceeEEecCCCeEEEEEEcCCeEEEEEEECCCCCEEEeEEEEEEecc
Confidence 9999999999999999999999999999999998 89999999975
No 2
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=100.00 E-value=1.2e-60 Score=519.82 Aligned_cols=389 Identities=25% Similarity=0.391 Sum_probs=305.1
Q ss_pred CCCCCcceeeecCCC-CCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcc-eEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKT-WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGT-LTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~-~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~-~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
++++|.|+||+++++ .++|+|+|+|... .+.+.|+||+.++....++.++ .+|...+ ..++++|+
T Consensus 15 ~~~~P~~v~l~~~~~~~~~~~v~W~t~~~--~~~~~V~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~~~~~ 81 (424)
T 2qfp_A 15 GYNAPQQVHITQGDLVGRAMIISWVTMDE--PGSSAVRYWSEKNGRKRIAKGKMSTYRFFN-----------YSSGFIHH 81 (424)
T ss_dssp STTCCEEEEEEECSSSSSCEEEEEEESSS--CCCCCEEEEESSSCCCEEECCEEECCBCSS-----------CBCCEEEE
T ss_pred CCCCCceEEEEecCCCCCeEEEEEECCCC--CCCCEEEEEeCCCCCceEEEEEEEEEEecC-----------CCCCEEEE
Confidence 567899999999987 5999999999753 4578999999876554433332 3343211 24689999
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ 322 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~ 322 (612)
|+|+||+|||+|+|||+.. .||+.++|+|+|.++...++||+++||+|... +..++++.+.+
T Consensus 82 v~l~gL~p~t~Y~Yrv~~~------~~s~~~~f~T~p~~~~~~~~~f~~igD~~~~~------------~~~~~l~~~~~ 143 (424)
T 2qfp_A 82 TTIRKLKYNTKYYYEVGLR------NTTRRFSFITPPQTGLDVPYTFGLIGDLGQSF------------DSNTTLSHYEL 143 (424)
T ss_dssp EEECSCCTTCEEEEEECCS------SSCEEEEEECCCCCCTTCCEEEEEECSCTTBH------------HHHHHHHHHHT
T ss_pred EEECCCCCCCEEEEEECCC------CccceEEEECCCCCCCCCCeEEEEEEeCCCCC------------ChHHHHHHHHh
Confidence 9999999999999999963 37899999999988777789999999998642 12345666665
Q ss_pred hcCCccEEEEeCcccccCCc----hhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeee
Q 007233 323 DLKNIDIVFHIGDICYANGY----ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFY 398 (612)
Q Consensus 323 ~~~~pDfvl~~GDi~Y~~g~----~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~ 398 (612)
...++|||||+||++|+++. ..+|+.|.+.++++.+.+|+|+++||||+.+... . ........+..+|.
T Consensus 144 ~~~~~D~vl~~GDl~y~~~~~~~~~~~~~~~~~~l~~~~~~~P~~~v~GNHD~~~~~~---~----~~~~~~~~~~~~f~ 216 (424)
T 2qfp_A 144 SPKKGQTVLFVGDLSYADRYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIEFAPE---I----NETEPFKPFSYRYH 216 (424)
T ss_dssp CSSCCCEEEECSCCSCGGGSGGGCTHHHHHHHHHHHHHHTTSCEEECCCHHHHCCBGG---G----TBCSTTHHHHHHCC
T ss_pred CCCCCCEEEEcCccccccccccccchHHHHHHHHHHHHHhcCCeEeecCCcccccCCc---c----cccccchhhhhhcc
Confidence 33489999999999998763 4579999999999888999999999999864210 0 00001234567788
Q ss_pred cCCC---CCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCC
Q 007233 399 VPAE---NRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFA 475 (612)
Q Consensus 399 ~P~~---~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~ 475 (612)
||.. ...+.||+|++|+++||+||++..+..+.+|++||+++|+++++++++|+||++|+|+ |++...+..++
T Consensus 217 ~P~~~~~~~~~~~ys~~~g~~~~i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~~~Iv~~H~P~-~~~~~~~~~~~--- 292 (424)
T 2qfp_A 217 VPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGRGTPQYTWLKKELRKVKRSETPWLIVLMHSPL-YNSYNHHFMEG--- 292 (424)
T ss_dssp CCGGGGTCSSTTSEEEEETTEEEEECCTTSCCSTTSHHHHHHHHHHHHCCTTTCCEEEEECSSCS-SCCBSTTTTTT---
T ss_pred CCccccCCCCCcEEEEEECCEEEEEecCCccCCCcHHHHHHHHHHHhhhcccCCCEEEEEeCcCc-eecCccccccc---
Confidence 8853 3457899999999999999999877666799999999999987777899999999999 76543211111
Q ss_pred chhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccC--CCccccCCCCceEEEEeCCCCCCCC---CCCCCCCC
Q 007233 476 EPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNK--EKNYYKGTLNGTIHVVAGGGGAGLA---EFTPLQTT 550 (612)
Q Consensus 476 ~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~--~~~~y~~~~~g~vyiv~G~gG~~l~---~~~~~~~~ 550 (612)
..+ |+.|+++|++++||++|+||+|.|||++|+++.+.... ....+ .++++++||++|+||+... .+..++|+
T Consensus 293 ~~~-r~~l~~ll~~~~VdlvlsGH~H~y~r~~~~~~~~~~~~~g~~~~~-~~~~~~vyi~~G~gg~~~~~~~~~~~~~p~ 370 (424)
T 2qfp_A 293 EAM-RTKFEAWFVKYKVDVVFAGHVHAYERSERVSNIAYKITNGLCTPV-KDQSAPVYITIGDAGNYGVIDSNMIQPQPE 370 (424)
T ss_dssp HHH-HHHHHHHHHHTTCSEEEECSSSSEEEECSEECCCCCSSSCCCSCE-ECTTSCEEEEECCSCTTSCCCCCBCSSCCT
T ss_pred HHH-HHHHHHHHHHhCCcEEEECChhhhheeccccCcceeccCCccccc-cCCCCcEEEEecCCCCccccCccCCCCCCC
Confidence 344 88999999999999999999999999999987543211 11112 2467999999999998642 45567889
Q ss_pred cceeeeCceeEEEEEEecCCeEEEEEEECCCCcE--EEEEEEEeCCCCc
Q 007233 551 WSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKV--YDSFRISRDYRDI 597 (612)
Q Consensus 551 ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v--~D~f~i~k~~~~~ 597 (612)
|++|+...|||++|++.|+++|.++|+++.||++ .|+|+|.|++..-
T Consensus 371 ~s~~~~~~~G~~~l~v~n~t~~~~~~~~~~~g~~~~~D~~~i~~~~~~~ 419 (424)
T 2qfp_A 371 YSAFREASFGHGMFDIKNRTHAHFSWNRNQDGVAVEADSVWFFNRHWYP 419 (424)
T ss_dssp TEEEEECCCEEEEEEECSSSEEEEEEEETTSCTTCCSEEEEEECTTTCC
T ss_pred cceEEecCCCEEEEEEEcCcEEEEEEEECCCCCEEeeeEEEEEeccccc
Confidence 9999999999999999999999999999999997 5999999986543
No 3
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=100.00 E-value=2.9e-34 Score=319.34 Aligned_cols=381 Identities=18% Similarity=0.229 Sum_probs=234.2
Q ss_pred CcceeeecCCC-CCcEEEEEEeCCCC-------CCCccEEEEeecCCCCcc--ccCcceEEecCCcCCCCccceeccCCC
Q 007233 169 PVYPRLAQGKT-WNEMTVTWTSGYGI-------NEAEAFVQWGRKGGDRTH--SPAGTLTFDRGSMCGAPARTVGWRDPG 238 (612)
Q Consensus 169 p~~~~La~~~~-~~~m~V~W~t~~~~-------~~~~~~V~yg~~~~~~~~--~~~~~~t~~~~~mcg~pa~~~g~~~~g 238 (612)
|...-++.|+. ++++ |.|+.-... ......|+|....+.... ...++.+ .. -+.+
T Consensus 8 ~f~~GvasGDp~~~~v-ilWtr~~p~~~~~~~~~~~~~~v~~eva~d~~f~~~v~~g~~~-a~-------------~~~~ 72 (527)
T 2yeq_A 8 PFTLGVASGDPLSDSV-VLWTRLAPDPLNGGGMPKQAVPVKWEVAKDEHFRKIVRKGTEM-AK-------------PSLA 72 (527)
T ss_dssp SCTTCEEEECCCSSCE-EEEEECCSBGGGTBCCCSSCEEEEEEEESSTTSSSEEEEEEEE-EC-------------GGGT
T ss_pred CccccccccCCCCCeE-EEEEecCCcccCCCCCCCCceEEEEEEecCCccccceEeeeEE-ec-------------CCCc
Confidence 44445667775 5666 679875321 012457777765544332 2222211 10 1246
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCC-CCeEEEEEeecCCCCCCCCCcccccccchHHHH
Q 007233 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQN-SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTT 317 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~-~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~ 317 (612)
++|+|.|+||+|||+|+|||+.. ..+|++++|+|+|.++.. .++||+++||.+... +..+++
T Consensus 73 ~t~~v~v~gL~P~t~Y~Yr~~~~-----~~~S~~g~frT~P~~~~~~~~~rfa~~sc~~~~~------------g~~~~~ 135 (527)
T 2yeq_A 73 HSVHVEADGLEPNKVYYYRFKTG-----HELSPVGKTKTLPAPGANVPQMTFAFASCQQYEH------------GYYTAY 135 (527)
T ss_dssp TEEEEEECSCCTTCEEEEEEEET-----TEECCCEEEECCCCTTCCCCCEEEEEECCCCGGG------------CCCHHH
T ss_pred eEEEeecCCcCCCCEEEEEEEeC-----CCcCCCceEEcCCCCCCCCCCeEEEEEecCCCCC------------CccHHH
Confidence 89999999999999999999974 247999999999987653 579999999997631 112456
Q ss_pred HHHHHhcCCccEEEEeCcccccCCch--------------------h----HHHHHH--HhhhhhhcCCCeEEcCCCCcc
Q 007233 318 RQLIQDLKNIDIVFHIGDICYANGYI--------------------S----QWDQFT--AQIEPIASTVPYMIASGNHER 371 (612)
Q Consensus 318 ~~i~~~~~~pDfvl~~GDi~Y~~g~~--------------------~----~wd~f~--~~i~~l~s~vP~~~v~GNHD~ 371 (612)
..|.+ .++|||||+||++|+++.. . .|.+++ ..++.+.+.+|+|+++||||+
T Consensus 136 ~~ia~--~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~~~~dp~lq~~~a~~P~i~~wDDHE~ 213 (527)
T 2yeq_A 136 KHMAK--EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQYRSDANLKAAHAAFPWVVTWDDHEV 213 (527)
T ss_dssp HHHTT--SCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHHHHTCHHHHHHHHHSEEEECCCSTTT
T ss_pred HHHHh--cCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHHHhCCHHHHHHHhcCCEEEecccccc
Confidence 66665 6899999999999997642 1 122222 235667789999999999999
Q ss_pred CCCCCCCCCCCCCCCCcc----ccccceee-ecCCC-------CCCceEEEEEeCC-EEEEEEeCCCCCC----------
Q 007233 372 DWPGTGSFYGNKDSGGEC----GVLAETMF-YVPAE-------NRAKFWYSTDYGM-FRFCVADTEHDWR---------- 428 (612)
Q Consensus 372 ~~~~~~~~y~~~dsgge~----g~~~~~~f-~~P~~-------~~~~~~Ysfd~G~-v~fi~Ldt~~~~~---------- 428 (612)
..+............+.. ..+++.+| .||.. .....||+|++|+ ++||+|||+....
T Consensus 214 ~nn~~~~~~~~~~~~~~f~~rr~~A~~ay~e~~P~~~~~~p~~~~~~~y~sf~~G~lv~~i~LDtR~yr~~~~~~~~~~~ 293 (527)
T 2yeq_A 214 ENNYANKIPEKGQSVEAFVLRRAAAYQAYYEHMPLRISSLPNGPDMQLYRHFTYGNLASFNVLDTRQYRDDQANNDGNKP 293 (527)
T ss_dssp STTCBTTBCSTTCCHHHHHHHHHHHHHHHHHHSCCCGGGCCBTTBCCCCEEEEETTTEEEEECCSSSSCCCCGGGSSEEC
T ss_pred cCCCCCCcccccCCcccHHHHHHHHHHHHHHhCCCCcccCCCCCCceEEEEEEcCCcceEEEEecccccccccccccccc
Confidence 742111100000000000 00122222 34422 3457899999999 9999999975321
Q ss_pred ------------CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCcccc------CCCCCCchhhHHHHHHHHHhc
Q 007233 429 ------------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYA------VDGSFAEPMGRESLQKLWQKY 490 (612)
Q Consensus 429 ------------~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~------~~~~~~~~~~r~~l~~l~~k~ 490 (612)
.+.+|++||+++|++ ++++|+||+.|+|+ +......+ .+..-.-...|+.|+++|.++
T Consensus 294 ~~~~~~~~~~~~lG~~Q~~WL~~~L~~---s~a~W~Iv~s~~p~-~~~~~~~g~~~~~~~D~W~g~~~~R~~Ll~~l~~~ 369 (527)
T 2yeq_A 294 PSDESRNPNRTLLGKEQEQWLFNNLGS---STAHWNVLAQQIFF-AKWNFGTSASPIYSMDSWDGYPAQRERVINFIKSK 369 (527)
T ss_dssp CCHHHHCTTCCSSCHHHHHHHHHHHHH---CCSSEEEEECSSCC-SCCCSSCSSSCCEETTSGGGSHHHHHHHHHHHHHT
T ss_pred ccccccCCcccccCHHHHHHHHHHHhc---CCCCeEEEEeCCcc-cccccCCCcccccCccchhccHHHHHHHHHHHHHh
Confidence 368999999999997 57899999999999 65432111 011000122389999999999
Q ss_pred CCe--EEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCC--CC--CCCCCCCC---CCCCcceeeeCceeE
Q 007233 491 KVD--IAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGG--GG--AGLAEFTP---LQTTWSLYRDYDYGF 561 (612)
Q Consensus 491 ~Vd--lvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~--gG--~~l~~~~~---~~~~ws~~~~~~~Gy 561 (612)
+|+ ++|+||+|.+++.....+.. ... ....++-+++++. +| ..+..... ...++..|.+...||
T Consensus 370 ~v~n~vvLsGDvH~~~~~~~~~~~~---~p~----~~~~~~ef~~ssi~s~~~g~~~~~~~~~~~~~np~~~~~~~~~Gy 442 (527)
T 2yeq_A 370 NLNNVVVLTGDVHASWASNLHVDFE---KTS----SKIFGAEFVGTSITSGGNGADKRADTDQILKENPHIQFFNDYRGY 442 (527)
T ss_dssp TCCCEEEEECSSSSEEEEEEESSTT---CTT----SCEEEEEEECCCSSTTCSCBSBCTTHHHHHHHCTTEEEEEBCEEE
T ss_pred CCCCEEEEEcchHHHhHhhcccccc---CCC----CCceEEEEEcCCeeCCCCcccchhhhhhhhhcCCcceeeeCCCCE
Confidence 994 99999999999986321110 000 0001333333321 11 11100000 011233455578999
Q ss_pred EEEEEecCCeEEEEEEE-----CCCCc--EEEEEEEEeCCC
Q 007233 562 VKLTAFDHSNLLFEYKK-----SSDGK--VYDSFRISRDYR 595 (612)
Q Consensus 562 ~~l~v~n~~~l~~~~~~-----~~dG~--v~D~f~i~k~~~ 595 (612)
++|++ +.+.++++|+. +.++. ..-+|++....+
T Consensus 443 ~~v~v-t~~~~~~~~~~v~~v~~~~~~~~~~~~~~~~~g~~ 482 (527)
T 2yeq_A 443 VRCTV-TPHQWKADYRVMPFVTEPGAAISTRASFVYQKDQT 482 (527)
T ss_dssp EEEEE-ETTEEEEEEEEESCSSSSCCCCEEEEEEEECSSTT
T ss_pred EEEEE-eccEEEEEEEEeCCccCCCCcceeeeEEEEeCCCc
Confidence 99999 78999999875 22333 444566655433
No 4
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1e-34 Score=305.87 Aligned_cols=264 Identities=19% Similarity=0.291 Sum_probs=186.3
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCc----hhHHHHHHHhh-hhh--hc
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGY----ISQWDQFTAQI-EPI--AS 358 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~----~~~wd~f~~~i-~~l--~s 358 (612)
.+||+++||+|.+.. .|......+.+++++ .+|||||++||++|. |. ..+|.+.++.+ +.+ ..
T Consensus 3 ~l~f~~igD~g~g~~--------~q~~va~~m~~~~~~-~~pd~vl~~GD~~y~-G~~~~~d~~~~~~f~~~~~~~~~~~ 72 (342)
T 3tgh_A 3 QLRFASLGDWGKDTK--------GQILNAKYFKQFIKN-ERVTFIVSPGSNFID-GVKGLNDPAWKNLYEDVYSEEKGDM 72 (342)
T ss_dssp CEEEEECCSCBSCCH--------HHHHHHHHHHHHHHH-TTCCEEEECSCSBTT-CCCSTTCTHHHHHTTTTSCCGGGTT
T ss_pred eEEEEEEecCCCCCc--------hHHHHHHHHHHHHhh-cCCCEEEECCCcccC-CCCcCccHHHHHHHHHHhhhhhhhh
Confidence 489999999997521 233333444555543 789999999999998 54 44555433332 222 34
Q ss_pred CCCeEEcCCCCccCCCCCC------CCCCCCC----CCCccccccceeeecCCCCCCceEEEE----Ee---------C-
Q 007233 359 TVPYMIASGNHERDWPGTG------SFYGNKD----SGGECGVLAETMFYVPAENRAKFWYST----DY---------G- 414 (612)
Q Consensus 359 ~vP~~~v~GNHD~~~~~~~------~~y~~~d----sgge~g~~~~~~f~~P~~~~~~~~Ysf----d~---------G- 414 (612)
.+|+++++||||+...... ..|...+ ...........||.||. .||++ .. |
T Consensus 73 ~~P~~~vlGNHD~~~~~~aq~~~~~~~~~~~~~~~~~~~~~~~~~~~rw~~P~-----~yY~~~~~f~~~~~~~~~~~g~ 147 (342)
T 3tgh_A 73 YMPFFTVLGTRDWTGNYNAQLLKGQGIYIEKNGETSIEKDADATNYPKWIMPN-----YWYHYFTHFTVSSGPSIVKTGH 147 (342)
T ss_dssp CSEEEECCCHHHHTSCHHHHHHHHHC---------------CCCSSCEEECSS-----SSEEEEEEEEEC---------C
T ss_pred CCCEEEeCCCCccCCCchHhhhhhhcccccccccccccccccccCCCCccCCc-----ceEEEEEEeeccccccccccCC
Confidence 7999999999998632100 0010000 00001122457899984 46654 32 3
Q ss_pred ---CEEEEEEeCCCCCC----------CCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHH
Q 007233 415 ---MFRFCVADTEHDWR----------EGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRE 481 (612)
Q Consensus 415 ---~v~fi~Ldt~~~~~----------~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~ 481 (612)
.++||+|||..... ...+|++||+++|+. ++|+||++|||+ |++..+ + . ...+ ++
T Consensus 148 ~~~~v~fi~LDT~~l~~~~~~~~~~~~~~~~Ql~WLe~~L~~-----~~~~IV~~HhP~-~~~~~~-~---~-~~~l-~~ 215 (342)
T 3tgh_A 148 KDLAAAFIFIDTWVLSSNFPYKKIHEKAWNDLKSQLSVAKKI-----ADFIIVVGDQPI-YSSGYS-R---G-SSYL-AY 215 (342)
T ss_dssp EEEEEEEEECCTTTTSTTCSCHHHHHHHHHHHHHHHHHHHHH-----CSEEEEECSSCS-SCSSTT-C---C-CHHH-HH
T ss_pred CCceEEEEEEeCcccccCCcccccchHHHHHHHHHHHHhhcc-----CCcEEEEECCCC-CCCCCC-C---C-cHHH-HH
Confidence 39999999974321 125899999999943 479999999999 877532 1 1 1233 88
Q ss_pred HHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeE
Q 007233 482 SLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGF 561 (612)
Q Consensus 482 ~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy 561 (612)
.|++||++|+|+++|+||+|.|+|.++ ++++||++|+||...... ...++|+.|+...+||
T Consensus 216 ~l~~ll~~~~VdlvlsGH~H~~~~~~~------------------~g~~~iv~Ga~g~~~~~~-~~~~~~s~f~~~~~Gf 276 (342)
T 3tgh_A 216 YLLPLLKDAEVDLYISGHDNNMEVIED------------------NDMAHITCGSGSMSQGKS-GMKNSKSLFFSSDIGF 276 (342)
T ss_dssp HTHHHHHHTTCCEEEECSSSSEEEEEE------------------TTEEEEEECCSSCCCCCC-SSCCTTEEEEECSSEE
T ss_pred HHHHHHHHcCCCEEEECCCcceeEEee------------------CCcEEEEeCccccccccC-CCCCCcceeecCCCcE
Confidence 999999999999999999999999863 468999999988764322 1346799999999999
Q ss_pred EEEEEecCCeEEEEEEECCCCcEEEEEEEEeCCCC
Q 007233 562 VKLTAFDHSNLLFEYKKSSDGKVYDSFRISRDYRD 596 (612)
Q Consensus 562 ~~l~v~n~~~l~~~~~~~~dG~v~D~f~i~k~~~~ 596 (612)
.++++ +++.|+++|+.+.+|+++|+|+|.|+.+.
T Consensus 277 ~~l~v-~~~~l~~~~~~~~~G~vld~~~i~k~~~~ 310 (342)
T 3tgh_A 277 CVHEL-SNNGIVTKFVSSKKGEVIYTHKLNIKKKK 310 (342)
T ss_dssp EEEEE-ETTEEEEEEEETTTTEEEEEEEEECCCCS
T ss_pred EEEEE-ECCEEEEEEEECCCCcEEEEEEEECCCCc
Confidence 99999 78999999996699999999999997764
No 5
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=99.97 E-value=6.4e-30 Score=263.93 Aligned_cols=265 Identities=20% Similarity=0.263 Sum_probs=177.1
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHH-HHHHhhhhhh-----c
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWD-QFTAQIEPIA-----S 358 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd-~f~~~i~~l~-----s 358 (612)
..+||+++||+|......... ..+....+.+.+++++ .+|||||++||++|..|....++ +|.+.++.+. .
T Consensus 5 ~~~~~~~isD~h~~~~~~~~~--~~~~~~~~~l~~~~~~-~~~d~vv~~GD~~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 81 (313)
T 1ute_A 5 PILRFVAVGDWGGVPNAPFHT--AREMANAKAIATTVKT-LGADFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLR 81 (313)
T ss_dssp CCEEEEEECSCCCCSSTTSSC--HHHHHHHHHHHHHHHH-HCCSEEEECSCCSTTTCCSSTTCTHHHHHTTTTSCSGGGT
T ss_pred CceEEEEEcccCCCCCccccC--chHHHHHHHHHHHHHh-cCCCEEEECCCccCcCCCCCcchHHHHHHHHHHcCchhhc
Confidence 359999999999875321000 0011122344444443 58999999999998865432222 3444444432 2
Q ss_pred CCCeEEcCCCCccCCCCCCC-CCCCCCCCCccccccceeeecCCCCCCceEEEEEe------CCEEEEEEeCCCC-----
Q 007233 359 TVPYMIASGNHERDWPGTGS-FYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY------GMFRFCVADTEHD----- 426 (612)
Q Consensus 359 ~vP~~~v~GNHD~~~~~~~~-~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~------G~v~fi~Ldt~~~----- 426 (612)
.+|+++++||||+....... -|. ....+|.+| ..||++++ ++++||+||+...
T Consensus 82 ~~p~~~v~GNHD~~~~~~~~~~~~----------~~~~~~~~~-----~~~y~~~~~~~~~~~~~~~i~lds~~~~~~~~ 146 (313)
T 1ute_A 82 NVPWHVLAGNHDHLGNVSAQIAYS----------KISKRWNFP-----SPYYRLRFKIPRSNVSVAIFMLDTVTLCGNSD 146 (313)
T ss_dssp TCCEEECCCHHHHHSCHHHHHHGG----------GTSTTEECC-----SSSEEEEEECTTSSCEEEEEECCHHHHHCCGG
T ss_pred CCCEEEECCCCccCCCcccccccc----------ccCCCccCc-----ccceEEEEecCCCCceEEEEEEEChHHhCcCc
Confidence 79999999999985311000 010 012345555 34788888 5899999998641
Q ss_pred ------------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeE
Q 007233 427 ------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDI 494 (612)
Q Consensus 427 ------------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vdl 494 (612)
...+.+|++||++.|++. +.+|+|+++|+|+ ++.... +. ...+ ++.|.++|++++|++
T Consensus 147 ~~~~~~~~~~~~~~~~~~q~~wL~~~L~~~---~~~~~iv~~H~p~-~~~~~~----~~-~~~~-~~~l~~~l~~~~v~~ 216 (313)
T 1ute_A 147 DFVSQQPERPRNLALARTQLAWIKKQLAAA---KEDYVLVAGHYPV-WSIAEH----GP-THCL-VKQLLPLLTTHKVTA 216 (313)
T ss_dssp GSTTCSCCSCSCHHHHHHHHHHHHHHHHHC---CCSEEEEECSSCS-SCCSSS----CC-CHHH-HHHTHHHHHHTTCSE
T ss_pred cccccccCCccccchHHHHHHHHHHHHHhC---CCCeEEEEECCCC-ccCCCC----CC-cHHH-HHHHHHHHHHcCCcE
Confidence 012479999999999985 3589999999999 765432 11 1233 788999999999999
Q ss_pred EEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCC---CCCCCcceeeeC----ceeEEEEEEe
Q 007233 495 AIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFT---PLQTTWSLYRDY----DYGFVKLTAF 567 (612)
Q Consensus 495 vlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~---~~~~~ws~~~~~----~~Gy~~l~v~ 567 (612)
+|+||+|.+++..+ .+|+.||++|++|....... ....++..|... .+||.+|++
T Consensus 217 ~l~GH~H~~~~~~~-----------------~~g~~~i~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~l~v- 278 (313)
T 1ute_A 217 YLCGHDHNLQYLQD-----------------ENGLGFVLSGAGNFMDPSKKHLRKVPNGYLRFHFGAENSLGGFAYVEI- 278 (313)
T ss_dssp EEECSSSSEEEEEC-----------------TTCCEEEEECBSSCCCCCCTTGGGSCTTCEEEEECCTTSCCEEEEEEE-
T ss_pred EEECChhhhhhccC-----------------CCCceEEEECCCcCcCccccccccCCCcccceeccCcCCCCceEEEEE-
Confidence 99999999998852 25789999999886421110 011234445432 389999999
Q ss_pred cCCeEEEEEEECCCCcEEEEEEEEeCCCC
Q 007233 568 DHSNLLFEYKKSSDGKVYDSFRISRDYRD 596 (612)
Q Consensus 568 n~~~l~~~~~~~~dG~v~D~f~i~k~~~~ 596 (612)
+++.++++|+ +.+|+++|+|+|.|..+.
T Consensus 279 ~~~~~~~~~~-~~~g~~~~~~~l~~~~~~ 306 (313)
T 1ute_A 279 TPKEMSVTYI-EASGKSLFKTKLPRRARS 306 (313)
T ss_dssp CSSCEEEEEE-ETTSCEEEEEEECCCC--
T ss_pred EcCEEEEEEE-cCCCcEEEEEEeccccCc
Confidence 7789999998 469999999999997643
No 6
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=99.89 E-value=4.9e-22 Score=207.12 Aligned_cols=250 Identities=16% Similarity=0.121 Sum_probs=161.1
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh----cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhc-
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS- 358 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s- 358 (612)
...+||++++|+|...... ..+... .....++++++. ..++|+||++||+++ .+...+|+.+.+.++++..
T Consensus 23 ~~~~ri~~iSD~H~~~~~~-~~~~~~--~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~l~~~ 98 (330)
T 3ib7_A 23 RPDYVLLHISDTHLIGGDR-RLYGAV--DADDRLGELLEQLNQSGLRPDAIVFTGDLAD-KGEPAAYRKLRGLVEPFAAQ 98 (330)
T ss_dssp CCSEEEEEECCCCBCSSSC-CBTTTB--CHHHHHHHHHHHHHHHTCCCSEEEECSCCBT-TCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCCCCc-cccccc--CHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHHHHhh
Confidence 3469999999999865321 111111 122334444433 258999999999995 4555677777777777643
Q ss_pred -CCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC----CCCHHH
Q 007233 359 -TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW----REGTEQ 433 (612)
Q Consensus 359 -~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q 433 (612)
.+|+++++||||+... +...+.-........+|++++++++|++||+.... ....+|
T Consensus 99 ~~~pv~~v~GNHD~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~q 160 (330)
T 3ib7_A 99 LGAELVWVMGNHDDRAE------------------LRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQ 160 (330)
T ss_dssp HTCEEEECCCTTSCHHH------------------HHHHHHCCCCCCSCCCEEEEETTEEEEECCCCCTTCCSBCCCHHH
T ss_pred cCCCEEEeCCCCCCHHH------------------HHHHhcccccccCCcceEEEeCCEEEEEecCCCCCCCCCccCHHH
Confidence 7999999999997310 00001000111235678999999999999997532 246899
Q ss_pred HHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccce
Q 007233 434 YKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNI 513 (612)
Q Consensus 434 ~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~ 513 (612)
++||++.|++.. +.+ +|+++|||+ +........ . ... ..++.|.+++++++|+++|+||+|..+...
T Consensus 161 ~~wl~~~l~~~~--~~~-~iv~~Hh~p-~~~~~~~~~-~-~~~-~~~~~l~~~l~~~~v~~v~~GH~H~~~~~~------ 227 (330)
T 3ib7_A 161 LGWLAEELATPA--PDG-TILALHHPP-IPSVLDMAV-T-VEL-RDQAALGRVLRGTDVRAILAGHLHYSTNAT------ 227 (330)
T ss_dssp HHHHHHHTTSCC--TTC-EEEECSSCS-SCCSSGGGG-G-GSB-SCHHHHHHHHTTSSEEEEEECSSSSCEEEE------
T ss_pred HHHHHHHHHhcc--cCC-eEEEEECCC-CCCCccccc-c-ccc-cCHHHHHHHHhccCceEEEECCCCCcccce------
Confidence 999999999853 333 788888887 544221111 0 111 126789999999999999999999987542
Q ss_pred eccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCc
Q 007233 514 CTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK 583 (612)
Q Consensus 514 ~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~ 583 (612)
.+++.+++.|+.+...... .............||..|++ ++..+.++++.-..+.
T Consensus 228 ------------~~g~~~~~~gs~~~~~~~~--~~~g~~~~~~~~~gy~iv~i-~~~~~~~~~v~~~~~~ 282 (330)
T 3ib7_A 228 ------------FVGIPVSVASATCYTQDLT--VAAGGTRGRDGAQGCNLVHV-YPDTVVHSVIPLGGGE 282 (330)
T ss_dssp ------------ETTEEEEECCCSSCEECTT--SCTTCCCEESCSCEEEEEEE-CSSCEEEEEEECSCCC
T ss_pred ------------ECCEEEEecCcceeccCCC--CCCcceeccCCCCceEEEEE-ECCCeEEEEeccCCCC
Confidence 2467777877766432111 01111222345679999999 6778899988644333
No 7
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=99.88 E-value=3.1e-21 Score=195.53 Aligned_cols=242 Identities=12% Similarity=0.077 Sum_probs=152.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh----cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCe
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD----LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~----~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~ 362 (612)
+||++++|+|...... ..+.. ......++++++. ..++|+||++||+++ .+...+|+.+.+.++.+ .+|+
T Consensus 1 mri~~iSD~H~~~~~~-~~~g~--~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~-~~~~~~~~~~~~~l~~l--~~p~ 74 (274)
T 3d03_A 1 MLLAHISDTHFRSRGE-KLYGF--IDVNAANADVVSQLNALRERPDAVVVSGDIVN-CGRPEEYQVARQILGSL--NYPL 74 (274)
T ss_dssp CEEEEECCCCBCSTTC-CBTTT--BCHHHHHHHHHHHHHTCSSCCSEEEEESCCBS-SCCHHHHHHHHHHHTTC--SSCE
T ss_pred CEEEEEecCCcCCCCc-ccccc--cCHHHHHHHHHHHHHhcCCCCCEEEECCCCCC-CCCHHHHHHHHHHHHhc--CCCE
Confidence 5899999999875321 11110 1112334444432 236899999999995 44456677777777665 6899
Q ss_pred EEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCC-CceEEEEEeCCEEEEEEeCCCCC----CCCHHHHHHH
Q 007233 363 MIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENR-AKFWYSTDYGMFRFCVADTEHDW----REGTEQYKFI 437 (612)
Q Consensus 363 ~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~-~~~~Ysfd~G~v~fi~Ldt~~~~----~~~~~Q~~WL 437 (612)
++++||||...... . .+...| ++.... +..+|+++.++++|++||+.... ....+|++||
T Consensus 75 ~~v~GNHD~~~~~~-~-------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ld~~~~~~~~~~~~~~~~~wl 139 (274)
T 3d03_A 75 YLIPGNHDDKALFL-E-------------YLQPLC-PQLGSDANNMRCAVDDFATRLLFIDSSRAGTSKGWLTDETISWL 139 (274)
T ss_dssp EEECCTTSCHHHHH-H-------------HHGGGS-GGGCSCGGGCCEEECSSSSEEEECCCCCTTCSSBCCCHHHHHHH
T ss_pred EEECCCCCCHHHHH-H-------------Hhhhhh-cCcccCCCceEEEEEeCCEEEEEEeCCCCCCCCCeeCHHHHHHH
Confidence 99999999741100 0 000001 111111 23568899999999999997532 2458999999
Q ss_pred HHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeecccccceecc
Q 007233 438 EHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTN 516 (612)
Q Consensus 438 ~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~p~~~~~~~~ 516 (612)
++.|++. +..++|+++|+|+ +....... +. ... ..++.+.++++++ +|+++|+||+|.++...
T Consensus 140 ~~~l~~~---~~~~~iv~~H~p~-~~~~~~~~-~~-~~~-~~~~~l~~~l~~~~~v~~vl~GH~H~~~~~~--------- 203 (274)
T 3d03_A 140 EAQLFEG---GDKPATIFMHHPP-LPLGNAQM-DP-IAC-ENGHRLLALVERFPSLTRIFCGHNHSLTMTQ--------- 203 (274)
T ss_dssp HHHHHHH---TTSCEEEEESSCS-SCCSCTTT-GG-GSB-TTTHHHHHHHHHCTTEEEEEECSSSSCEEEE---------
T ss_pred HHHHHhC---CCCCEEEEECCCC-cccCCccc-Cc-ccC-cCHHHHHHHHHhCCCceEEEeCCCCCchhhe---------
Confidence 9999985 3456999999998 65432111 10 001 1256899999998 89999999999987652
Q ss_pred CCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCc-ceeeeCceeEEEEEEecCCeEEEEEEE
Q 007233 517 KEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTW-SLYRDYDYGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 517 ~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~w-s~~~~~~~Gy~~l~v~n~~~l~~~~~~ 578 (612)
.++..++++++.+.... +. .+.+ +.+.....||..+++ ++..++++++.
T Consensus 204 ---------~~g~~~~~~pg~~~~~~-~~--~~~~~~~~~~~~~gy~i~~i-~~~~~~~~~~~ 253 (274)
T 3d03_A 204 ---------YRQALISTLPGTVHQVP-YC--HADTDPYYDLSPASCLMHRQ-VGEQWVSYQHS 253 (274)
T ss_dssp ---------ETTEEEEECCCSSCBCC-CC--SSCCSCEEBCCCCEEEEEEE-ETTEEEEEEEE
T ss_pred ---------ECCEEEEEcCCcceeec-cC--CCccccccccCCCceEEEEE-eCCcEEEEEEe
Confidence 13444555554332211 11 1222 234456689999999 66788888875
No 8
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=99.87 E-value=3.7e-21 Score=198.73 Aligned_cols=250 Identities=15% Similarity=0.154 Sum_probs=150.6
Q ss_pred CCeEEEEEeecCCCCCCCCCccc----ccccchHHHHHHHHHhc--CCccEEEEeCcccccCCc-----hhHHHHHHHhh
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYN----DFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY-----ISQWDQFTAQI 353 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~----~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~-----~~~wd~f~~~i 353 (612)
..+||++++|+|.........+. .+.......++++++.. .+||+||++||+++.... ...++.+.+.+
T Consensus 4 ~~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GD~~~~~~~~~~~~~~~~~~~~~~l 83 (322)
T 2nxf_A 4 PVFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRERVQCVVQLGDIIDGHNRRRDASDRALDTVMAEL 83 (322)
T ss_dssp CSEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHTTCSEEEECSCCBCTHHHHTTCHHHHHHHHHHHH
T ss_pred CceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccCCCCCcchHHHHHHHHHHHHH
Confidence 45999999999997643211000 01112233444444432 689999999999965321 22333344444
Q ss_pred hhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEe-CCEEEEEEeCCCC------
Q 007233 354 EPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDY-GMFRFCVADTEHD------ 426 (612)
Q Consensus 354 ~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~-G~v~fi~Ldt~~~------ 426 (612)
+.+ .+|+++++||||...-....+.......... ........+|. .+..||+|+. ++++||+||+...
T Consensus 84 ~~~--~~p~~~v~GNHD~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~y~~~~~~~~~~i~ld~~~~~~~~~~ 158 (322)
T 2nxf_A 84 DAC--SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQR-TGTDTGSDLIG--DDIYAYEFSPAPNFRFVLLDAYDLSVIGRE 158 (322)
T ss_dssp HTT--CSEEEECCCHHHHHHCCHHHHHTSTTCCCC-------CEECGG--GTCCCEEEEEETTEEEEECCTTSBCSSSSC
T ss_pred Hhc--CCcEEEecCCCCcccCCHHHHhhhhCCcccc-cccccccccCC--CCceEEEEecCCCEEEEEEcCceecccccC
Confidence 432 6899999999998310000010000000000 00000111332 2456899998 9999999998642
Q ss_pred -------------------C---------------------CCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCc
Q 007233 427 -------------------W---------------------REGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGI 466 (612)
Q Consensus 427 -------------------~---------------------~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~ 466 (612)
| ....+|++||++.|+++.+. ..++||++|+|+ +....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~q~~wL~~~L~~~~~~-~~~~iv~~H~p~-~~~~~ 236 (322)
T 2nxf_A 159 EESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQWLDAVLTLSDHK-QERVLIFSHLPV-HPCAA 236 (322)
T ss_dssp TTSHHHHHHHHHHHHHCCCTTCTTSCSCSSSGGGGCSTTCCBCCHHHHHHHHHHHHHHHHH-TCEEEEEESSCC-CTTSS
T ss_pred CCChhhHHHHHHHhhcCcccccccCccccccccccccccCCccCHHHHHHHHHHHHHHHhc-CCcEEEEEccCC-CCCCC
Confidence 0 12379999999999986421 346899999998 65432
Q ss_pred cccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCC
Q 007233 467 FYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFT 545 (612)
Q Consensus 467 ~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~ 545 (612)
.. ... .. .++.+.++++++ +|+++|+||+|.+++... .+|+.|++.|+.-. .
T Consensus 237 ~~---~~~-~~-~~~~~~~ll~~~~~v~~~~~GH~H~~~~~~~-----------------~~g~~~i~~~~~~~----~- 289 (322)
T 2nxf_A 237 DP---ICL-AW-NHEAVLSVLRSHQSVLCFIAGHDHDGGRCTD-----------------SSGAQHITLEGVIE----T- 289 (322)
T ss_dssp CG---GGS-CT-THHHHHHHHHTCTTEEEEEECSCTTCEEEEC-----------------TTSCEEEECCCGGG----C-
T ss_pred Cc---ccc-cc-CHHHHHHHHhcCCCeEEEEcCCcCCCCceec-----------------cCCceEEEecchhh----C-
Confidence 10 000 11 267899999999 799999999999988641 24667777665411 0
Q ss_pred CCCCCcceeeeCceeEEEEEEecCCeEEEEEEE
Q 007233 546 PLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 546 ~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 578 (612)
.....||..+++ ++..+.++.+.
T Consensus 290 ---------~~~~~~y~~v~~-~~~~~~~~~~~ 312 (322)
T 2nxf_A 290 ---------PPHSHAFATAYL-YEDRMVMKGRG 312 (322)
T ss_dssp ---------CTTSCEEEEEEE-CSSEEEEEEEE
T ss_pred ---------CCCCCcEEEEEE-ECCeEEEEecc
Confidence 123468999998 67788887664
No 9
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=99.74 E-value=2.2e-16 Score=171.82 Aligned_cols=216 Identities=12% Similarity=0.152 Sum_probs=126.5
Q ss_pred CCCeEEEEEeecCCCCCCC---CCccccc---c-----cchHHHHHHHHHh--cCCccEEEEeCcccccCCchhHHHHHH
Q 007233 284 NSLQRVVIFGDMGKDEADG---SNEYNDF---Q-----YASLNTTRQLIQD--LKNIDIVFHIGDICYANGYISQWDQFT 350 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~---~~~~~~~---~-----~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~~~~wd~f~ 350 (612)
+..+||++++|+|...... ...+..+ . ......++++++. ..+||+||++||+++. +....++.+.
T Consensus 37 ~~~~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~-~~~~~~~~~~ 115 (443)
T 2xmo_A 37 DRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNN-GEKTSHEELA 115 (443)
T ss_dssp CCCEEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHHTCSEEEEESCCBSS-CCHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHcCCCEEEECCCCCCC-CCHHHHHHHH
Confidence 3469999999999863210 0000000 0 0013344444433 2579999999999954 4445566666
Q ss_pred Hhhhhhhc-CCCeEEcCCCCccCCCCCCCCCCCCC-C-CCccc-cccceeeecCC-------CCCCceEEEEEeCCEEEE
Q 007233 351 AQIEPIAS-TVPYMIASGNHERDWPGTGSFYGNKD-S-GGECG-VLAETMFYVPA-------ENRAKFWYSTDYGMFRFC 419 (612)
Q Consensus 351 ~~i~~l~s-~vP~~~v~GNHD~~~~~~~~~y~~~d-s-gge~g-~~~~~~f~~P~-------~~~~~~~Ysfd~G~v~fi 419 (612)
+.++.+.. .+|+++++||||+....... +.... . ....+ ..+...|.-.. ......|+.+..++++|+
T Consensus 116 ~~l~~l~~~~~~~~~v~GNHD~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~i 194 (443)
T 2xmo_A 116 KKLTQVEKNGTQVFVVPGNHDINNPWARK-FEKDKQLPTDTISPTDFSKIYSDFGYEDAISSDEFSLSYLAAPSSKVWLL 194 (443)
T ss_dssp HHHHHHHHTTCEEEEECCTTTSSCTTCEE-EETTEEEECCCCCHHHHHHHTCCCCCTTCSEECSSSSCEEECSBSSEEEE
T ss_pred HHHHHHHhCCCeEEEECCcCCCCCccccc-cCCcccccccccCHHHHHHHhhhcChhhhhccCCCCceEEEecCCCEEEE
Confidence 66666543 78999999999986321110 00000 0 00000 00111111000 001223445567899999
Q ss_pred EEeCCCC------------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHH
Q 007233 420 VADTEHD------------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLW 487 (612)
Q Consensus 420 ~Ldt~~~------------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~ 487 (612)
+||+... .....+|++||++.|+++.. +...+|+++|+|+ +....... ...... .++.+.+++
T Consensus 195 ~Lds~~~~~~~~~~~~~~~g~~~~~ql~wL~~~L~~~~~-~~~~~Iv~~H~p~-~~~~~~~~--~~~~~~-~~~~l~~ll 269 (443)
T 2xmo_A 195 MLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKK-NGAKLIPVLHHNL-TDHNDVIQ--KGYTIN-YNQQVIDAL 269 (443)
T ss_dssp ECCCBCCTTHHHHTSCCCCBCCCHHHHHHHHHHHHHHHH-TTCEEEEECSSBS-SCSSCC----CCSBCT-THHHHHHHH
T ss_pred EeeCCCcCcccccCCCCcCCccCHHHHHHHHHHHHHHHH-cCCeEEEEECCCC-cccccccc--cccccc-cHHHHHHHH
Confidence 9999742 12357999999999998643 2345899999998 54421111 111111 267899999
Q ss_pred HhcCCeEEEecCcccceee
Q 007233 488 QKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 488 ~k~~VdlvlsGH~H~YeR~ 506 (612)
++++|+++|+||+|..+..
T Consensus 270 ~~~~v~lvl~GH~H~~~~~ 288 (443)
T 2xmo_A 270 TEGAMDFSLSGHIHTQNIR 288 (443)
T ss_dssp HHTTCCEEEECSSCSCEEE
T ss_pred HHcCCeEEEECCcccCchh
Confidence 9999999999999997754
No 10
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=99.49 E-value=9e-13 Score=129.11 Aligned_cols=173 Identities=12% Similarity=0.118 Sum_probs=98.2
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.+||+++||+|.+. ..++++++.. .++|+|+++||+++......++.++++.++.+ .+|++
T Consensus 5 ~mri~~iSD~H~~~---------------~~~~~~~~~~~~~~~D~vi~~GDl~~~~~~~~~~~~~~~~l~~~--~~pv~ 67 (228)
T 1uf3_A 5 VRYILATSNPMGDL---------------EALEKFVKLAPDTGADAIALIGNLMPKAAKSRDYAAFFRILSEA--HLPTA 67 (228)
T ss_dssp CCEEEEEECCTTCH---------------HHHHHHHTHHHHHTCSEEEEESCSSCTTCCHHHHHHHHHHHGGG--CSCEE
T ss_pred eEEEEEEeeccCCH---------------HHHHHHHHHHhhcCCCEEEECCCCCCCCCCHHHHHHHHHHHHhc--CCcEE
Confidence 47999999999642 1233333322 37999999999996542444455566665543 67999
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeC-CEEEEEEeCCC--CCCCC--------HH
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYG-MFRFCVADTEH--DWREG--------TE 432 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G-~v~fi~Ldt~~--~~~~~--------~~ 432 (612)
+++||||.... .++... .+.+ ..+.....+. + ..+.++ +++|+.++... .+... ..
T Consensus 68 ~v~GNHD~~~~---~~~~~~-~~~~--~~~~~~~~l~-----~--~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~ 134 (228)
T 1uf3_A 68 YVPGPQDAPIW---EYLREA-ANVE--LVHPEMRNVH-----E--TFTFWRGPYLVAGVGGEIADEGEPEEHEALRYPAW 134 (228)
T ss_dssp EECCTTSCSHH---HHHHHH-HHHH--HHCTTEEECB-----T--SEEEETTTEEEEEECSEEESSSCCBSSSSCEEEHH
T ss_pred EECCCCCchhH---HHHHhh-hhhh--ccCcceEEcc-----c--ceEeeCCCcEEecCCCCcCCCCccChhhcccchhh
Confidence 99999997410 000000 0000 0000001110 1 124456 78888887421 11111 22
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcc
Q 007233 433 QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVH 501 (612)
Q Consensus 433 Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H 501 (612)
+.+|+++.|++.. ..+.|++.|+|+ +..... ..+.+.+.+++++++++++++||+|
T Consensus 135 ~~~~~~~~l~~~~---~~~~il~~H~p~-~~~~~~---------~~~~~~~~~~~~~~~~~~~~~GH~H 190 (228)
T 1uf3_A 135 VAEYRLKALWELK---DYPKIFLFHTMP-YHKGLN---------EQGSHEVAHLIKTHNPLLVLVAGKG 190 (228)
T ss_dssp HHHHHHGGGGGSC---SCCEEEEESSCB-CBTTTB---------TTSBHHHHHHHHHHCCSEEEECCSS
T ss_pred hHHHHHHHHHhCC---CCCeEEEEccCc-ccCCcc---------ccCHHHHHHHHHHhCCCEEEEcccc
Confidence 2344555555532 235899999998 543110 1113467788888999999999999
No 11
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=99.39 E-value=5.2e-12 Score=126.70 Aligned_cols=183 Identities=11% Similarity=0.090 Sum_probs=95.0
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhH---------------H----
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQ---------------W---- 346 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~---------------w---- 346 (612)
.+||+++||+|.+.. .....++.+.+ .++|+|+++||++........ +
T Consensus 5 ~mri~~iSDlH~~~~-----------~~~~~l~~~~~--~~~D~vi~~GDl~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 71 (260)
T 2yvt_A 5 PRKVLAIKNFKERFD-----------LLPKLKGVIAE--KQPDILVVVGNILKNEALEKEYERAHLARREPNRKVIHENE 71 (260)
T ss_dssp CCEEEEEECCTTCGG-----------GHHHHHHHHHH--HCCSEEEEESCCCCCHHHHHHHHHHHHTTCCCCTHHHHHHH
T ss_pred eEEEEEEeecCCChH-----------HHHHHHHHHHh--cCCCEEEECCCCCCccCcchhhhhhhhhhcccchhhhhHHH
Confidence 479999999997531 11122333322 579999999999954321100 0
Q ss_pred ----HHHHHhhhhhhc-CCCeEEcCCCCccCCCCC-CCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEE
Q 007233 347 ----DQFTAQIEPIAS-TVPYMIASGNHERDWPGT-GSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCV 420 (612)
Q Consensus 347 ----d~f~~~i~~l~s-~vP~~~v~GNHD~~~~~~-~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~ 420 (612)
+.+.+.++.+.. .+|+++++||||...... ...+. .. +. +.....+ .+. ..+++++++|++
T Consensus 72 ~~~~~~~~~~l~~l~~~~~pv~~v~GNHD~~~~~~~~~~~~--~~----~~-~~~~~~l-----~~~-~~~~~~~~~i~g 138 (260)
T 2yvt_A 72 HYIIETLDKFFREIGELGVKTFVVPGKNDAPLKIFLRAAYE--AE----TA-YPNIRVL-----HEG-FAGWRGEFEVIG 138 (260)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEECCTTSCCHHHHHHHHHH--TT----TT-CTTEEEC-----SSE-EEEETTTEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEcCCCCchhhhhHHHHhh--hc----cC-CcceEEe-----cCc-ceEEECCEEEEe
Confidence 122233333333 589999999999742000 00000 00 00 0000001 011 236788999999
Q ss_pred EeCCCCC-CCCHHHH----HHHH----HHHhhccCCCCCEEEEEEecccccCC-CccccCCCCCCchhhHHHHHHHHHhc
Q 007233 421 ADTEHDW-REGTEQY----KFIE----HCLASVDRQKQPWLIFLAHRVLGYSS-GIFYAVDGSFAEPMGRESLQKLWQKY 490 (612)
Q Consensus 421 Ldt~~~~-~~~~~Q~----~WL~----~~La~~~r~~~pwvIv~~H~P~~yss-~~~~~~~~~~~~~~~r~~l~~l~~k~ 490 (612)
++..... ....+|. .|+. +.|++. .+ ...|++.|+|+ +.. ........ ...+.+.+.++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~-~~~Il~~H~pp-~~~~~d~~~~~~---~~~~~~~l~~~~~~~ 211 (260)
T 2yvt_A 139 FGGLLTEHEFEEDFVLKYPRWYVEYILKFVNEL--KP-RRLVTIFYTPP-IGEFVDRTPEDP---KHHGSAVVNTIIKSL 211 (260)
T ss_dssp ECSEEESSCCBSSSSCEEEHHHHHHHGGGGGGS--CC-CEEEEEESSCC-SCSSTTCBTTBS---CCCSCHHHHHHHHHH
T ss_pred cCCCcCCCCcCHHHHhhcchhhHHHHHHHHHhc--CC-CCEEEEECCCc-cccccccCcccc---cccCcHHHHHHHHHh
Confidence 9743210 0011222 1433 334432 12 34688999998 543 11100000 111245788888899
Q ss_pred CCeEEEecCcc
Q 007233 491 KVDIAIYGHVH 501 (612)
Q Consensus 491 ~VdlvlsGH~H 501 (612)
+++++++||+|
T Consensus 212 ~~~~vl~GH~H 222 (260)
T 2yvt_A 212 NPEVAIVGHVG 222 (260)
T ss_dssp CCSEEEECSSC
T ss_pred CCCEEEECCcc
Confidence 99999999999
No 12
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=99.31 E-value=1.7e-11 Score=128.57 Aligned_cols=259 Identities=13% Similarity=0.088 Sum_probs=124.9
Q ss_pred CCeEEEEEeecCCCCC--CCCCcccccccchHHHHHHHHHhc--CCccEEEEeCc-ccccCCchh--HHHHHHHhhhhhh
Q 007233 285 SLQRVVIFGDMGKDEA--DGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGD-ICYANGYIS--QWDQFTAQIEPIA 357 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~--~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GD-i~Y~~g~~~--~wd~f~~~i~~l~ 357 (612)
..+||++++|+|.+.. .......+. ......++++++.. .++|+|+++|| ++ +.+... ..+.+.+.++.+.
T Consensus 17 ~~mrilh~SD~HlG~~~~~~~~~~~r~-~~~~~~l~~lv~~~~~~~~D~vliaGD~l~-d~~~~~~~~~~~~~~~l~~L~ 94 (336)
T 2q8u_A 17 KELKILHTSDWHLGVTSWTSSRPVDRR-EELKKALDKVVEEAEKREVDLILLTGDLLH-SRNNPSVVALHDLLDYLKRMM 94 (336)
T ss_dssp CEEEEEEEECCCBTCEECTTTCCEECH-HHHHHHHHHHHHHHHHHTCSEEEEESCSBS-CSSCCCHHHHHHHHHHHHHHH
T ss_pred CceEEEEECcccCCCCccccccCcChh-HHHHHHHHHHHHHHHHhCCCEEEECCcccc-CCCCCCHHHHHHHHHHHHHHH
Confidence 3599999999997621 000000000 11123455554432 57999999999 65 444322 2344555555554
Q ss_pred cCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC-------CCC
Q 007233 358 STVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW-------REG 430 (612)
Q Consensus 358 s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~-------~~~ 430 (612)
..+|+++++||||... . ..+... -...+ ..+.+-.+......+.++.+++.|++++..... ...
T Consensus 95 ~~~pv~~i~GNHD~~~-~--~~~~~~--l~~~g----~nv~v~~~~~~~~~~~~~~~~v~i~glp~~~~~~~~~~~~~~~ 165 (336)
T 2q8u_A 95 RTAPVVVLPGNHDWKG-L--KLFGNF--VTSIS----SDITFVMSFEPVDVEAKRGQKVRILPFPYPDESEALRKNEGDF 165 (336)
T ss_dssp HHSCEEECCC-------C--HHHHHH--HHHHC----SSEEECCSSSCEEEECTTSCEEEEEEECCC-------CCSSHH
T ss_pred hcCCEEEECCCCCccc-c--ccHHHH--HHhcC----CEEEEEecccccCceEEeCCCEEEEECCCCCHHHHHHHhhHHH
Confidence 3389999999999753 1 000000 00000 001111110000011222356888888643221 112
Q ss_pred HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccc
Q 007233 431 TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIY 510 (612)
Q Consensus 431 ~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~ 510 (612)
.+|.+|+.+.|...-+....+.|+++|.|+ +..... ..+..... ..+...+.+.++|++++||.|..+...
T Consensus 166 ~~~~~~~~~~l~~~~~~~~~~~Ill~H~~~-~~~~~~-~~~~~~~~----~~v~~~l~~~~~d~v~~GH~H~~~~~~--- 236 (336)
T 2q8u_A 166 RFFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGY-AGIEQGRE----IIINRALIPSVVDYAALGHIHSFREIQ--- 236 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCSSEEEEEEESEE-TTCC---------CC----CEECGGGSCTTSSEEEEESCSSCEEEE---
T ss_pred HHHHHHHHHHHHHhccCCCCCEEEEECccc-cCCCCC-CCccchhh----cccCHHHccccCCEEEEccccCceEeC---
Confidence 467889888886521023457999999998 532110 00000000 001112335689999999999987652
Q ss_pred cceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCcEEEEEEE
Q 007233 511 QNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRI 590 (612)
Q Consensus 511 ~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f~i 590 (612)
. .+..+..|+... ..+ +.. ....||..|++.++....++++.-.. +.+-++.+
T Consensus 237 ~----------------~~~i~y~GS~~~--~s~-------~e~-~~~~~~~lv~i~~~~~~~v~~i~~~~-r~~~~~~~ 289 (336)
T 2q8u_A 237 K----------------QPLTIYPGSLIR--IDF-------GEE-ADEKGAVFVELKRGEPPRYERIDASP-LPLKTLYY 289 (336)
T ss_dssp E----------------TTEEEECCCSSC--CSG-------GGT-TCCCEEEEEEEETTSCCEEEEEECCC-CCEEEEEE
T ss_pred C----------------CccEEECCCCcC--CCc-------ccc-CCCCEEEEEEEeCCCccEEEEEECCC-EEEEEeec
Confidence 0 112223443211 111 110 12468999998544457888886444 65656555
No 13
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=99.25 E-value=3.9e-10 Score=108.56 Aligned_cols=181 Identities=16% Similarity=0.234 Sum_probs=109.9
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
-+||+++||+|.+.... ...+.+.+++++ .++|+|+++||++. ...++.++.+ ..|++.+
T Consensus 10 mm~i~~iSD~H~~~~~~---------~~~~~l~~~~~~-~~~d~ii~~GDl~~--------~~~~~~l~~~--~~~~~~v 69 (192)
T 1z2w_A 10 RMLVLVLGDLHIPHRCN---------SLPAKFKKLLVP-GKIQHILCTGNLCT--------KESYDYLKTL--AGDVHIV 69 (192)
T ss_dssp -CEEEEECCCCBTTTCS---------SCCHHHHTTCCT-TSCSEEEECSCCBS--------HHHHHHHHHH--CSEEEEC
T ss_pred ceEEEEEecCCCCccch---------hHHHHHHHHhcc-CCCCEEEEcCCCCC--------HHHHHHHHhc--CCCEEEE
Confidence 37999999999753210 011233333332 56999999999983 2233344433 3589999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~ 445 (612)
+||||... .+|. ...++.
T Consensus 70 ~GNhD~~~------------------------~lp~------~~~~~~-------------------------------- 87 (192)
T 1z2w_A 70 RGDFDENL------------------------NYPE------QKVVTV-------------------------------- 87 (192)
T ss_dssp CCTTCCCT------------------------TSCS------EEEEEE--------------------------------
T ss_pred cCCcCccc------------------------cCCc------ceEEEE--------------------------------
Confidence 99999741 0110 011111
Q ss_pred CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCC
Q 007233 446 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGT 525 (612)
Q Consensus 446 r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~ 525 (612)
..+.|++.|.++ +.. + . ..+.+..++++.++|++++||+|......
T Consensus 88 ---~~~~i~l~Hg~~-~~~--~----~------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------ 133 (192)
T 1z2w_A 88 ---GQFKIGLIHGHQ-VIP--W----G------DMASLALLQRQFDVDILISGHTHKFEAFE------------------ 133 (192)
T ss_dssp ---TTEEEEEECSCC-CCB--T----T------CHHHHHHHHHHHSSSEEECCSSCCCEEEE------------------
T ss_pred ---CCEEEEEECCCc-CCC--C----C------CHHHHHHHHHhcCCCEEEECCcCcCccEe------------------
Confidence 125788888554 322 1 0 14567778888899999999999854321
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007233 526 LNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK-VYDSFRISR 592 (612)
Q Consensus 526 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~-v~D~f~i~k 592 (612)
.+++.++..|+.+....+.. .....+|..+++ ++..+.++++.-..++ .+.++++.|
T Consensus 134 ~~~~~~inpGS~~~~~~~~~---------~~~~~~y~il~~-~~~~~~~~~~~~~~~~~~v~~~~~~~ 191 (192)
T 1z2w_A 134 HENKFYINPGSATGAYNALE---------TNIIPSFVLMDI-QASTVVTYVYQLIGDDVKVERIEYKK 191 (192)
T ss_dssp ETTEEEEECCCTTCCCCSSC---------SCCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred ECCEEEEECCcccccCCCCC---------cCCCCcEEEEEE-ECCEEEEEEEEccCCEEEEEEEEEcc
Confidence 14677777887665321110 123468999998 6678888888644454 466666655
No 14
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=99.25 E-value=2.1e-10 Score=108.79 Aligned_cols=165 Identities=18% Similarity=0.216 Sum_probs=106.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC-CccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK-NIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.|++++||+|.. ...++++++... ++|+|+++||+.+. .++.+.. |++.+
T Consensus 7 m~i~~isD~H~~---------------~~~~~~~~~~~~~~~d~i~~~GD~~~~------------~l~~l~~--~~~~v 57 (176)
T 3ck2_A 7 QTIIVMSDSHGD---------------SLIVEEVRDRYVGKVDAVFHNGDSELR------------PDSPLWE--GIRVV 57 (176)
T ss_dssp EEEEEECCCTTC---------------HHHHHHHHHHHTTTSSEEEECSCCCSC------------TTCGGGT--TEEEC
T ss_pred cEEEEEecCCCC---------------HHHHHHHHHHhhcCCCEEEECCCCchH------------HHHhhhC--CeEEe
Confidence 799999999942 123455555433 79999999998421 2333332 99999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~ 445 (612)
.||||... .+|. ...+..
T Consensus 58 ~GNhD~~~------------------------~~p~------~~~~~~-------------------------------- 75 (176)
T 3ck2_A 58 KGNMDFYA------------------------GYPE------RLVTEL-------------------------------- 75 (176)
T ss_dssp CCTTCCST------------------------TCCS------EEEEEE--------------------------------
T ss_pred cCcccchh------------------------cCCc------EEEEEE--------------------------------
Confidence 99999631 0110 000100
Q ss_pred CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCC
Q 007233 446 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGT 525 (612)
Q Consensus 446 r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~ 525 (612)
..+.|++.|.|+ +... . ..+.+.+++++++++++++||+|......
T Consensus 76 ---~~~~i~~~Hg~~-~~~~------~------~~~~l~~~~~~~~~d~vi~GHtH~~~~~~------------------ 121 (176)
T 3ck2_A 76 ---GSTKIIQTHGHL-FDIN------F------NFQKLDYWAQEEEAAICLYGHLHVPSAWL------------------ 121 (176)
T ss_dssp ---TTEEEEEECSGG-GTTT------T------CSHHHHHHHHHTTCSEEECCSSCCEEEEE------------------
T ss_pred ---CCeEEEEECCCc-cCCC------C------CHHHHHHHHHhcCCCEEEECCcCCCCcEE------------------
Confidence 124788899887 5321 0 13467778888999999999999865321
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCcEEEEEEE
Q 007233 526 LNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGKVYDSFRI 590 (612)
Q Consensus 526 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~v~D~f~i 590 (612)
.+++.++..|+.|..... ....+|..+++ ++..+.++++ ..+|+++.+++.
T Consensus 122 ~~~~~~inpGs~~~~~~~------------~~~~~y~il~~-~~~~~~v~~~-~~~~~~~~~~~~ 172 (176)
T 3ck2_A 122 EGKILFLNPGSISQPRGT------------IRECLYARVEI-DDSYFKVDFL-TRDHEVYPGLSK 172 (176)
T ss_dssp ETTEEEEEECCSSSCCTT------------CCSCCEEEEEE-CSSEEEEEEE-CTTSCBCTTCCE
T ss_pred ECCEEEEECCCCCcCCCC------------CCCCeEEEEEE-cCCEEEEEEE-EECCEEcchhhc
Confidence 146777888877653210 11358999998 6678999987 567887775443
No 15
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=99.24 E-value=4.5e-11 Score=119.68 Aligned_cols=214 Identities=9% Similarity=0.001 Sum_probs=109.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHH---HhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLI---QDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~---~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.||+++||+|... ......++.+. +...++|+|+++||++...... .+..+.+..+....|++
T Consensus 2 m~i~~isD~H~~~-----------~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~~~---~~~~~~l~~l~~~~~~~ 67 (252)
T 1nnw_A 2 VYVAVLANIAGNL-----------PALTAALSRIEEMREEGYEIEKYYILGNIVGLFPYP---KEVIEVIKDLTKKENVK 67 (252)
T ss_dssp CEEEEEECCTTCH-----------HHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSSCH---HHHHHHHHHHHHHSCEE
T ss_pred cEEEEEeecCCCH-----------HHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCCCH---HHHHHHHHhhHhhcCee
Confidence 5899999999531 01112222222 2101799999999999543222 23334444443336899
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCC---CCCHHHHHHHHHH
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDW---REGTEQYKFIEHC 440 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~---~~~~~Q~~WL~~~ 440 (612)
+++||||........ .++ .+.... . +++.... ... ..| ....+|.+||++.
T Consensus 68 ~v~GNhD~~~~~~~~---------~~~-~~~~~~--~----------~~~~~~~---~~~-~~~~~~~l~~~~~~~L~~l 121 (252)
T 1nnw_A 68 IIRGKYDQIIAMSDP---------HAT-DPGYID--K----------LELPGHV---KKA-LKFTWEKLGHEGREYLRDL 121 (252)
T ss_dssp EECCHHHHHHHHSCT---------TCS-SSGGGG--G----------SSCCHHH---HHH-HHHHHHHHHHHHHHHHHTS
T ss_pred EEecchHHHhhcccc---------ccC-Cccccc--c----------hhhhHHH---HHH-HHHHHHHCCHHHHHHHHhC
Confidence 999999974211000 000 000000 0 0000000 000 000 1135788898763
Q ss_pred HhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhc-CCeEEEecCcccceeecccccceeccCCC
Q 007233 441 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKY-KVDIAIYGHVHNYERTCPIYQNICTNKEK 519 (612)
Q Consensus 441 La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~-~VdlvlsGH~H~YeR~~p~~~~~~~~~~~ 519 (612)
.......-....|++.|+++ +.....+. . .....+.+..++.++ +++++++||+|......
T Consensus 122 p~~~~~~~~~~~i~~~H~~p-~~~~~~~~----~-~~~~~~~l~~~~~~~~~~~~vi~GHtH~~~~~~------------ 183 (252)
T 1nnw_A 122 PIYLVDKIGGNEVFGVYGSP-INPFDGEV----L-AEQPTSYYEAIMRPVKDYEMLIVASPMYPVDAM------------ 183 (252)
T ss_dssp CSCEEEEETTEEEEEESSCS-SCTTTCCC----C-SSCCHHHHHHHHGGGTTSSEEEESTTCSEEEEE------------
T ss_pred CceEEEeeCCcEEEEEcCCC-CCCccccc----C-CCCCHHHHHHHHhcCCCCCEEEECCccccceEe------------
Confidence 33221111224677888876 33211000 1 111146788888888 99999999999855331
Q ss_pred ccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEE
Q 007233 520 NYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 520 ~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 577 (612)
.+++++|..|+.|...+. +...+|..+++ ++..+.+..+
T Consensus 184 ------~~~~~~in~Gs~~~~~~~------------~~~~~y~il~~-~~~~v~~~~v 222 (252)
T 1nnw_A 184 ------TRYGRVVCPGSVGFPPGK------------EHKATFALVDV-DTLKPKFIEV 222 (252)
T ss_dssp ------ETTEEEEEECCSSSCSSS------------SCCEEEEEEET-TTCCEEEEEE
T ss_pred ------cCCeEEEECCCccCCCCC------------CCcceEEEEEC-CCCeEEEEEe
Confidence 146778888887754210 12357888876 4445554443
No 16
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=99.24 E-value=1.8e-10 Score=113.15 Aligned_cols=190 Identities=20% Similarity=0.279 Sum_probs=111.1
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.+||++++|+|.+.... . . .+.+.++++ ..++|+|+++||++. .+.++.++.+ ..|++.+
T Consensus 25 ~m~i~~iSD~H~~~~~~--~---l----~~~l~~~~~-~~~~D~vi~~GDl~~--------~~~l~~l~~~--~~~v~~V 84 (215)
T 2a22_A 25 GDLVLLIGDLKIPYGAK--E---L----PSNFRELLA-TDKINYVLCTGNVCS--------QEYVEMLKNI--TKNVYIV 84 (215)
T ss_dssp CEEEEEECCCCTTTTCS--S---C----CGGGHHHHH-CTTCCEEEECSCCCC--------HHHHHHHHHH--CSCEEEC
T ss_pred CcEEEEEecCCCCCChH--H---H----HHHHHHHHh-cCCCCEEEECCCCCC--------HHHHHHHHHc--CCCEEEe
Confidence 47999999999753210 0 1 123444444 267999999999993 2334444443 3689999
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~ 445 (612)
+||||..... +. ..+. ..+|. .. ..
T Consensus 85 ~GNHD~~~~~----~~---------~~~~--~~lp~------~~---------------------------------~~- 109 (215)
T 2a22_A 85 SGDLDSAIFN----PD---------PESN--GVFPE------YV---------------------------------VV- 109 (215)
T ss_dssp CCTTCCSCCB----CC---------GGGT--BCCCS------EE---------------------------------EE-
T ss_pred cCCCcCcccc----cC---------hhhH--hhCCc------eE---------------------------------EE-
Confidence 9999975211 00 0000 00000 00 00
Q ss_pred CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCC
Q 007233 446 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGT 525 (612)
Q Consensus 446 r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~ 525 (612)
....+.|++.|.++ +.. + . ..+.+..++++.++|++++||+|......
T Consensus 110 -~~~~~~i~l~Hg~~-~~~--~----~------~~~~l~~~~~~~~~d~vl~GHtH~~~~~~------------------ 157 (215)
T 2a22_A 110 -QIGEFKIGLMHGNQ-VLP--W----D------DPGSLEQWQRRLDCDILVTGHTHKLRVFE------------------ 157 (215)
T ss_dssp -EETTEEEEEECSTT-SSS--T----T------CHHHHHHHHHHHTCSEEEECSSCCCEEEE------------------
T ss_pred -ecCCeEEEEEcCCc-cCC--C----C------CHHHHHHHHhhcCCCEEEECCcCCCccEe------------------
Confidence 01234788888654 321 1 0 14567778888899999999999854321
Q ss_pred CCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEECCCCc-EEEEEEEEe
Q 007233 526 LNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKKSSDGK-VYDSFRISR 592 (612)
Q Consensus 526 ~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~~~dG~-v~D~f~i~k 592 (612)
.+++.++..|+.+....+.. .....+|..+++ ++..+.++++.-.+|+ .+.+..+.|
T Consensus 158 ~~~~~~inpGS~~~~~~~~~---------~~~~~~y~il~i-~~~~i~~~~~~~~~~~~~v~~~~~~~ 215 (215)
T 2a22_A 158 KNGKLFLNPGTATGAFSALT---------PDAPPSFMLMAL-QGNKVVLYVYDLRDGKTNVAMSEFSK 215 (215)
T ss_dssp ETTEEEEECCCSSCCCCTTS---------TTCCCEEEEEEE-ETTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred eCCEEEEECCcccccCCCCC---------CCCCCcEEEEEE-eCCcEEEEEEEecCCeEEEEEEEeeC
Confidence 14677777887665321100 123468999998 6678888888655555 355555443
No 17
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=99.18 E-value=2.8e-10 Score=116.73 Aligned_cols=208 Identities=14% Similarity=0.116 Sum_probs=111.2
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
...+||++++|+|..... + +..++|+||++||+++ .|...+.+.+.+.++.+. ..|++
T Consensus 57 ~~~mri~~iSD~H~~~~~---------------l-----~i~~~D~vi~aGDl~~-~g~~~e~~~~~~~L~~l~-~~~v~ 114 (296)
T 3rl5_A 57 AGHTRFVCISDTRSRTDG---------------I-----QMPYGDILLHTGDFTE-LGLPSEVKKFNDWLGNLP-YEYKI 114 (296)
T ss_dssp TTEEEEEEEBCCTTCCTT---------------C-----CCCSCSEEEECSCCSS-SCCHHHHHHHHHHHHTSC-CSEEE
T ss_pred CCCeEEEEEeeCCCCcch---------------h-----ccCCCCEEEECCcccC-CCCHHHHHHHHHHHHhCC-CCeEE
Confidence 345899999999975310 1 2367999999999995 455555666666666542 34689
Q ss_pred EcCCCCccCCCCCCCCCCCC--CCCCcc----ccc---cceeeecCCCC--CCceEEEEEeCCEEEEEEeCCCCCCC---
Q 007233 364 IASGNHERDWPGTGSFYGNK--DSGGEC----GVL---AETMFYVPAEN--RAKFWYSTDYGMFRFCVADTEHDWRE--- 429 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~--dsgge~----g~~---~~~~f~~P~~~--~~~~~Ysfd~G~v~fi~Ldt~~~~~~--- 429 (612)
+++||||+.... .++... ...... ..+ +...-.++.+. ..+ -+..+++++|++..-...+..
T Consensus 115 ~V~GNHD~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~--~~~~i~Gl~i~Gsp~tP~~~~~~f 190 (296)
T 3rl5_A 115 VIAGNHELTFDK--EFMADLVKQDYYRFPSVSKLKPEDFDNVQSLLTNSIYLQD--SEVTVKGFRIYGAPWTPWFNGWGF 190 (296)
T ss_dssp ECCCTTCGGGCH--HHHHHHTTSCGGGSHHHHTCCHHHHTTTGGGCTTSEECSS--EEEEETTEEEEEECCBCC--CCTT
T ss_pred EEcCCcccccch--hhhhhhhcccccccccccccccchhhhHhhhcCCeEEecC--CcEEECCEEEEEecCCCCCCCcCC
Confidence 999999985311 111000 000000 000 00000001000 001 135678899988543221111
Q ss_pred CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHH-HhcCCeEEEecCcccceeecc
Q 007233 430 GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLW-QKYKVDIAIYGHVHNYERTCP 508 (612)
Q Consensus 430 ~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~-~k~~VdlvlsGH~H~YeR~~p 508 (612)
..++.+++.+..... .....|++.|.|+ |......... ....+.+.|.+++ ++++++++++||+|......
T Consensus 191 ~~~~~~~~~~~~~~i---p~~~dILvTH~PP-~g~~D~~~~~---~~~~G~~~L~~~i~~~~~p~l~v~GH~H~~~~~~- 262 (296)
T 3rl5_A 191 NLPRGQSLLDKWNLI---PEGTDILMTHGPP-LGFRDWVPKE---LQRVGCVELLNTVQRRVRPKLHVFGGIHEGYGTM- 262 (296)
T ss_dssp BCCTTHHHHHHHTTS---CTTCSEEEESSCB-TTSSCEEGGG---TEECSBHHHHHHHHHTTCCSEEEECSCGGGCEEE-
T ss_pred CcchHHHHHHHHhhC---CCCCeEEEECCCc-cccccccccc---cCcCChHHHHHHHHHhcCCCEEEECCccCCCceE-
Confidence 112222443333333 1234689999998 6653221000 1122345777777 68999999999999743221
Q ss_pred cccceeccCCCccccCCCCceEEEEeCCCCCCC
Q 007233 509 IYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGL 541 (612)
Q Consensus 509 ~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l 541 (612)
..+++++|-.|+.|...
T Consensus 263 ----------------~~g~t~vvNpGs~~~~~ 279 (296)
T 3rl5_A 263 ----------------TDGYTTYINASTCTVSF 279 (296)
T ss_dssp ----------------ECSSCEEEECBCSCTTS
T ss_pred ----------------EECCEEEEECCcCCcCc
Confidence 01467778888777654
No 18
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=99.03 E-value=1.1e-09 Score=116.80 Aligned_cols=202 Identities=14% Similarity=0.230 Sum_probs=101.0
Q ss_pred eEEEEEeecCCCCCCCCCccc-ccccchHHHHHHHHHh--cCCccEEEEeCcccccCCc--hhHHHHHHHhhhhhhcCCC
Q 007233 287 QRVVIFGDMGKDEADGSNEYN-DFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY--ISQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~-~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~--~~~wd~f~~~i~~l~s~vP 361 (612)
+||++++|+|.+.......+. .........++++++. ..+||+||++||++++.+. ...++.+.+.++.+...+|
T Consensus 1 mrilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~~~D~vliaGDl~hd~~~~~~~~~~~~~~~l~~l~~~~~ 80 (379)
T 3tho_B 1 MKILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKREVDLILLTGDLLHSRNNPSVVALHDLLDYLKRMMRTAP 80 (379)
T ss_dssp CEEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHHTCSEEEECSCCBSCSSSCCHHHHHHHHHHHHHHHHHSC
T ss_pred CeEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhcCCCEEEECCCccccCCCCCHHHHHHHHHHHHHHHhCCC
Confidence 589999999987531000000 0001122344554432 2589999999999944322 3344555566665544499
Q ss_pred eEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEE--eC-CEEEEEEeCCCCCC----CCHHHH
Q 007233 362 YMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTD--YG-MFRFCVADTEHDWR----EGTEQY 434 (612)
Q Consensus 362 ~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd--~G-~v~fi~Ldt~~~~~----~~~~Q~ 434 (612)
+++++||||.... ..+.... .. .+-...+ +. .... +.+. .| .+.|+.+.-..... .+.++.
T Consensus 81 v~~i~GNHD~~~~---~~~~~~~--~~--~~~~~~~-~~--~~~~--v~l~~~~G~~v~i~glp~~~~~~~~~~~~~~~~ 148 (379)
T 3tho_B 81 VVVLPGNQDWKGL---KLFGNFV--TS--ISSDITF-VM--SFEP--VDVEAKRGQKVRILPFPYPDESEALRKNEGDFR 148 (379)
T ss_dssp EEECCCTTSCTTH---HHHHHHH--HT--TCSSEEE-CC--SSCC--EEEECTTCCEEEEEEECCCCCC----CHHHHHH
T ss_pred EEEEcCCCccccC---ccccccc--cc--cCCccee-ec--ccce--EEEEcCCCCEEEEEECCCCCHHHHhhhhccchH
Confidence 9999999995310 0000000 00 0000000 00 0011 2222 23 46777775322111 135678
Q ss_pred HHHHHHHhhcc---CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceee
Q 007233 435 KFIEHCLASVD---RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERT 506 (612)
Q Consensus 435 ~WL~~~La~~~---r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~ 506 (612)
+|+.+.|+..- .....+.|+++|.++ .........+.... ..+...+...++|+++.||.|..+..
T Consensus 149 ~~l~~~l~~~~~~~~~~~~~~I~l~H~~v-~g~~~~~~se~~~~-----~~v~~~~~~~~~dyvalGH~H~~q~~ 217 (379)
T 3tho_B 149 FFLESRLNKLYEEALKKEDFAIFMGHFTV-EGLAGYAGIEQGRE-----IIINRALIPSVVDYAALGHIHSFREI 217 (379)
T ss_dssp HHHHHHHHHHHHHHHTCSSEEEEEEESCB-SCCCC-------CS-----CCBCGGGSCTTSSEEEEESCSSCEEE
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEeccc-cCCccCCCCccccc-----cccCHHHcCcCCCEEEcccccCCeEe
Confidence 99999887211 124456899999987 32211001110000 01111222468999999999998654
No 19
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=99.01 E-value=3.4e-09 Score=113.24 Aligned_cols=186 Identities=15% Similarity=0.056 Sum_probs=96.6
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccc--cccchHHHHHHHHHh--cCCccEEEEeCcccccCCc-hhHHHHHHHhhhhhhc
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYND--FQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPIAS 358 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~--~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~l~s 358 (612)
...+||++++|+|.+... +.. ........++++++. ..++|+||++||++..... ...+..+.+.++.+..
T Consensus 18 ~~~mrilhiSD~Hlg~~~----~~~~~r~~~~~~~l~~~v~~~~~~~~D~VliaGDl~d~~~p~~~~~~~~~~~l~~L~~ 93 (386)
T 3av0_A 18 GSHMMFVHIADNHLGYRQ----YNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHE 93 (386)
T ss_dssp CCCCEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHTTCCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEccCCCCccc----cCcchhhHHHHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHh
Confidence 345899999999987421 100 001112345555543 2689999999999854322 2344556666766654
Q ss_pred -CCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHH
Q 007233 359 -TVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFI 437 (612)
Q Consensus 359 -~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL 437 (612)
.+|+++++||||.......... .+ .+...+..-.+ ..++..+-+++.|++++...... ..+..+||
T Consensus 94 ~~~pv~~v~GNHD~~~~~~~~~~------~~---~l~~~v~~l~~---~~v~~~~~~~v~i~gl~~~~~~~-~~~~~~~l 160 (386)
T 3av0_A 94 NNIKVYIVAGNHEMPRRLGEESP------LA---LLKDYVKILDG---KDVINVNGEEIFICGTYYHKKSK-REEMLDKL 160 (386)
T ss_dssp TTCEEEECCCGGGSCSSTTSCCG------GG---GGTTTCEECSE---EEEEEETTEEEEEEEECCCCSTT-HHHHHHHH
T ss_pred cCCcEEEEcCCCCCCccccccCH------HH---HHHHHeEEcCC---CcEEEeCCCCEEEEeCCCCCHHH-HHHHHHHH
Confidence 5899999999997532110000 00 00000111000 11221122458888888654321 12223343
Q ss_pred ---HHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007233 438 ---EHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 438 ---~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
...+. ...+.|++.|.|+ .... .+...... .. + .++|++++||+|..++
T Consensus 161 ~~l~~~~~-----~~~~~Ill~H~~~-~~~~-----~~~~~~~~--~~----l--~~~d~v~~GH~H~~~~ 212 (386)
T 3av0_A 161 KNFESEAK-----NYKKKILMLHQGI-NPYI-----PLDYELEH--FD----L--PKFSYYALGHIHKRIL 212 (386)
T ss_dssp HHHHHHHH-----TCSSEEEEECCCC-TTTS-----SSSCSSCG--GG----S--CCCSEEEECSCCSCEE
T ss_pred HHhhhhcc-----cCCCEEEEECcCc-cccC-----CCCcccCH--HH----h--hhCCeEEccCCCCCcc
Confidence 33222 2335899999987 3211 01110111 11 1 1399999999998743
No 20
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=99.01 E-value=2.3e-09 Score=107.25 Aligned_cols=211 Identities=15% Similarity=0.184 Sum_probs=110.7
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEc
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIA 365 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v 365 (612)
.+|++++||+|.+ ...+++++++..++|.++++||++...... .+..+.+..+. +++.+
T Consensus 3 ~mri~~isDiHg~---------------~~~l~~~l~~~~~~d~ii~~GDl~~~g~~~---~~~~~~l~~~~---~~~~v 61 (246)
T 3rqz_A 3 AMRILIISDVHAN---------------LVALEAVLSDAGRVDDIWSLGDIVGYGPRP---RECVELVRVLA---PNISV 61 (246)
T ss_dssp CCCEEEECCCTTC---------------HHHHHHHHHHHCSCSEEEECSCCSSSSSCH---HHHHHHHHHHC---SSEEC
T ss_pred CcEEEEEeecCCC---------------HHHHHHHHHhccCCCEEEECCCcCCCCCCH---HHHHHHHHhcC---CCEEE
Confidence 3789999999943 234566666655899999999999543222 23334443331 36899
Q ss_pred CCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhhcc
Q 007233 366 SGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLASVD 445 (612)
Q Consensus 366 ~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~~~ 445 (612)
.||||...... +... .+. +.......|. ......++.+||++......
T Consensus 62 ~GNhD~~~~~~---~~~~------------~~~-~~~~~~~~~~----------------~~~l~~~~~~~L~~lp~~~~ 109 (246)
T 3rqz_A 62 IGNHDWACIGR---LSLD------------EFN-PVARFASYWT----------------TMQLQAEHLQYLESLPNRMI 109 (246)
T ss_dssp CCHHHHHHTCC---CCCC--------------C-GGGGCHHHHH----------------HHHCCHHHHHHHHHCCSEEE
T ss_pred eCchHHHHhcc---CCcc------------ccC-HHHHHHHHHH----------------HHHcCHHHHHHHHhCCcEEE
Confidence 99999752110 0000 000 0000000000 00124688999986443322
Q ss_pred CCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce-eecccccceec--cC--CCc
Q 007233 446 RQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE-RTCPIYQNICT--NK--EKN 520 (612)
Q Consensus 446 r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye-R~~p~~~~~~~--~~--~~~ 520 (612)
. . .+++.|.++ .+... ... .. ...+.++|++++++++|+||+|.-. +...- +..+. .. ...
T Consensus 110 ~--~--~i~~~Hg~p-~~~~~-----~~~-~~--~~~~~~~l~~~~~~l~i~GHtH~p~~~~~~~-~~~~~~~~~~~~~~ 175 (246)
T 3rqz_A 110 D--G--DWTVVHGSP-RHPIW-----EYI-YN--ARIAALNFPAFDTPLCFVGHTHVPLYIREDE-ALSNVAPHHPNDGE 175 (246)
T ss_dssp E--T--TEEEESSCS-SSTTT-----CCC-CS--HHHHHHHGGGCCSSEEECCSSSSEEEEEHHH-HHTTCCCBCCCTTC
T ss_pred E--C--CEEEEECCc-CCccc-----ccc-CC--hHHHHHHHhccCCCEEEECCcCcccEEEecc-cccccccccccccc
Confidence 1 1 467788776 43210 111 11 4577888999999999999999732 32100 00000 00 000
Q ss_pred cccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEE
Q 007233 521 YYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYK 577 (612)
Q Consensus 521 ~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~ 577 (612)
.+. -..+...|..|+-|.+.+. +..-+|+.++. +...+++..+
T Consensus 176 ~~~-l~~g~~ivNpGSVG~Prdg------------~p~A~Y~i~d~-~~~~v~~~rv 218 (246)
T 3rqz_A 176 VLD-VSSGRYIINPGAVGQPRDG------------DPRASYAIFEP-DAQRVTFHRV 218 (246)
T ss_dssp EEE-CSSSCEEEEECCSSCCCSS------------CCSEEEEEEEG-GGTEEEEEEE
T ss_pred eee-cCCCeEEEECCccCCCCCc------------CCcceEEEEEC-CCCEEEEEEe
Confidence 000 0134677788888875311 12346888886 4455555443
No 21
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=98.99 E-value=2.7e-09 Score=108.47 Aligned_cols=216 Identities=15% Similarity=0.156 Sum_probs=113.3
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
..|++++||+|.+. ..+++++++. .++|.|+++||++...... .+..+.++.+ -|++
T Consensus 11 ~~~i~~iSDiHg~~---------------~~l~~vl~~~~~~~~D~ii~~GDlv~~g~~~---~~~~~~l~~~---~~~~ 69 (270)
T 3qfm_A 11 MTKIALLSDIHGNT---------------TALEAVLADARQLGVDEYWLLGDILMPGTGR---RRILDLLDQL---PITA 69 (270)
T ss_dssp CEEEEEECCCTTCH---------------HHHHHHHHHHHHTTCCEEEECSCCSSSSSCS---HHHHHHHHTS---CEEE
T ss_pred ccEEEEEecCCCCH---------------HHHHHHHHHHHhcCCCEEEEcCCCCCCCCCH---HHHHHHHHcc---CCEE
Confidence 48999999999531 2233333322 4799999999999543221 3444444443 3789
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 443 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~ 443 (612)
.+.||||...... . . +.++.. .|. ..+.+ .. +. ...-....+|.+||++.-..
T Consensus 70 ~v~GNhD~~~~~~---~---~--~~~~~~------~~~----~~~~~----~~----~~-~~~~~L~~~~~~~L~~LP~~ 122 (270)
T 3qfm_A 70 RVLGNWEDSLWHG---V---R--KELDST------RPS----QRYLL----RQ----CQ-YVLEEISLEEIEVLHNQPLQ 122 (270)
T ss_dssp ECCCHHHHHHHHH---H---T--TCSCTT------SHH----HHHHH----HH----HH-HHHTTSCHHHHHHHHSCCSE
T ss_pred EEcCChHHHHHHh---h---c--cccCCC------cHH----HHHHH----HH----HH-HHHHHcCHHHHHHHHhCCCc
Confidence 9999999742100 0 0 000000 000 00000 00 00 00012346888998864332
Q ss_pred ccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCcccc
Q 007233 444 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYK 523 (612)
Q Consensus 444 ~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~ 523 (612)
....-....|++.|..+ .+.....- ..... .+.+..++.+.++|++|+||+|.-....
T Consensus 123 ~~~~~~g~~i~lvHg~p-~~~~~~~~----~~~~~-~~~l~~~~~~~~~d~~i~GHtH~~~~~~---------------- 180 (270)
T 3qfm_A 123 IHRQFGDLTVGISHHLP-DKNWGREL----IHTGK-QEEFDRLVTHPPCDIAVYGHIHQQLLRY---------------- 180 (270)
T ss_dssp EEEEETTEEEEEESSBT-TBSSSSTT----STTCC-HHHHHHTTTTTTCSEEECCSSCSEEEEE----------------
T ss_pred eEEEECCcEEEEEECCC-CCCCCcee----cCCCc-HHHHHHHhcccCCCEEEECCcCchHhee----------------
Confidence 21111234677788654 32210000 00111 4578888888899999999999633221
Q ss_pred CCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCCeEEEEEEE
Q 007233 524 GTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHSNLLFEYKK 578 (612)
Q Consensus 524 ~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~~l~~~~~~ 578 (612)
..++..+|..|+.|.+...-+ ... .+....|+.+++.++..+.++|++
T Consensus 181 -~~~~~~~iNpGSvg~pr~~~~--~~~----~~~~asyaild~~~~~~~~v~~~r 228 (270)
T 3qfm_A 181 -GTGGQLIVNPGSIGQPFFLDA--QLR----KDLRAQYMILEFDDKGLVDMDFRR 228 (270)
T ss_dssp -CTTSCEEEEECCSSSCCCSST--TGG----GCCCEEEEEEEEETTEEEEEEEEE
T ss_pred -ccCCEEEEECCCccCCCCCCc--ccc----CCCCCEEEEEEecCCCceEEEEEE
Confidence 014678899999887542211 000 012357899998433335677664
No 22
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=98.93 E-value=2.6e-08 Score=95.77 Aligned_cols=61 Identities=21% Similarity=0.394 Sum_probs=42.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
+||+++||+|.. ...++++++.. .++|+|+++||++.. +.++.++.+ ..|+++
T Consensus 26 m~i~~iSD~Hg~---------------~~~l~~~l~~~~~~~~D~ii~~GDl~~~--------~~~~~l~~l--~~~~~~ 80 (190)
T 1s3l_A 26 MKIGIMSDTHDH---------------LPNIRKAIEIFNDENVETVIHCGDFVSL--------FVIKEFENL--NANIIA 80 (190)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHHHSCCSEEEECSCCCST--------HHHHHGGGC--SSEEEE
T ss_pred eEEEEEeeCCCC---------------HHHHHHHHHHHhhcCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEE
Confidence 899999999932 12233333322 689999999999842 234444433 579999
Q ss_pred cCCCCccC
Q 007233 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
++||||..
T Consensus 81 V~GNhD~~ 88 (190)
T 1s3l_A 81 TYGNNDGE 88 (190)
T ss_dssp ECCTTCCC
T ss_pred EeCCCcch
Confidence 99999974
No 23
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=98.70 E-value=1.9e-08 Score=96.78 Aligned_cols=149 Identities=18% Similarity=0.212 Sum_probs=82.9
Q ss_pred eEEEEEeecCCCCCCCC--CcccccccchHHHHHHHHHh-cCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGS--NEYNDFQYASLNTTRQLIQD-LKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~--~~~~~~~~~~~~~~~~i~~~-~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
+|+++++|+|.+..... ..+..+. ...+.+.+.+++ ..++|+|+++||+++.. .+++...+.++.+ ..|++
T Consensus 2 ~~i~~iSD~H~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~---~~~~~~~~~l~~l--~~~~~ 75 (195)
T 1xm7_A 2 AMMYFISDTHFYHENIINLNPEVRFK-GFEIVILTNLLKVLKPEDTLYHLGDFTWHF---NDKNEYLRIWKAL--PGRKI 75 (195)
T ss_dssp CCEEEEBCCCBTCTTHHHHSTTTCCT-THHHHHHHHHHTTCCTTCEEEECSCCBSCS---CCTTSHHHHHHHS--SSEEE
T ss_pred cEEEEEeccccCCCccccccCCCCHH-HHHHHHHHHHHHhCCCCCEEEECCCCCCCc---hhHHHHHHHHHHC--CCCEE
Confidence 57999999997642100 0011111 112223233332 25799999999999643 2223344444443 24899
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEeCCCCCCCCHHHHHHHHHHHhh
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVADTEHDWREGTEQYKFIEHCLAS 443 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ldt~~~~~~~~~Q~~WL~~~La~ 443 (612)
.++||||.... . +... |-+ +. +..||+ +
T Consensus 76 ~v~GNhD~~~~---~--------------~~~~-----------~~~----------l~----------~~~~l~----~ 103 (195)
T 1xm7_A 76 LVMGNHDKDKE---S--------------LKEY-----------FDE----------IY----------DFYKII----E 103 (195)
T ss_dssp EECCTTCCCHH---H--------------HTTT-----------CSE----------EE----------SSEEEE----E
T ss_pred EEeCCCCCchh---h--------------hhhh-----------hhc----------hh----------HHHHHH----h
Confidence 99999997410 0 0000 100 00 111221 1
Q ss_pred ccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCccccee
Q 007233 444 VDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYER 505 (612)
Q Consensus 444 ~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~YeR 505 (612)
. ..+.|++.|.|+ +..... .+ ....+.+.+++.+++++++|+||+|....
T Consensus 104 ~----~~~~i~~~H~~~-~~~~~~-----~~--~~~~~~l~~~~~~~~~~~vi~GHtH~~~~ 153 (195)
T 1xm7_A 104 H----KGKRILLSHYPA-KDPITE-----RY--PDRQEMVREIYFKENCDLLIHGHVHWNRE 153 (195)
T ss_dssp E----TTEEEEEESSCS-SCSSCC-----SC--HHHHHHHHHHHHHTTCSEEEECCCCCCSC
T ss_pred c----CCcEEEEEccCC-cCCCcc-----cc--cchHHHHHHHHHHcCCcEEEECCcCCCCc
Confidence 1 135799999987 543211 11 12367888999999999999999998654
No 24
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=98.70 E-value=1.1e-07 Score=90.57 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=41.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEEcC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMIAS 366 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~v~ 366 (612)
+|++++||+|.... ...+ .+.++++. .++|+|+++||++.. +..+.++.+ ..|++.++
T Consensus 23 mri~~iSD~Hg~~~-----~~~l----~~~l~~~~---~~~D~ii~~GD~~~~--------~~~~~l~~~--~~~v~~V~ 80 (178)
T 2kkn_A 23 KRFLLISDSHVPVR-----MASL----PDEILNSL---KEYDGVIGLGDYVDL--------DTVILLEKF--SKEFYGVH 80 (178)
T ss_dssp EEEEEECCCCBTTT-----TCCC----CHHHHHGG---GGCSEEEESSCBSCH--------HHHHHHHHH--TSSEEECC
T ss_pred eEEEEEecccCCCC-----HHHH----HHHHHHHh---cCCCEEEECCCCCCH--------HHHHHHHhc--CCCEEEEE
Confidence 79999999994211 0011 12233322 579999999999841 233344433 36999999
Q ss_pred CCCccC
Q 007233 367 GNHERD 372 (612)
Q Consensus 367 GNHD~~ 372 (612)
||||..
T Consensus 81 GNhD~~ 86 (178)
T 2kkn_A 81 GNMDYP 86 (178)
T ss_dssp CSSSCG
T ss_pred CCCCcH
Confidence 999963
No 25
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=98.68 E-value=3.4e-07 Score=95.62 Aligned_cols=82 Identities=13% Similarity=0.246 Sum_probs=52.4
Q ss_pred eEEEEEeecCCCCCCCCCccccc--ccchHHHHHHHHHh--cCCccEEEEeCcccccCC-chhHHHHHHHhhhhhhc-CC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDF--QYASLNTTRQLIQD--LKNIDIVFHIGDICYANG-YISQWDQFTAQIEPIAS-TV 360 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~--~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g-~~~~wd~f~~~i~~l~s-~v 360 (612)
+||++++|+|.+... +... .......++++++. ..++|+|+++||+++... ....+..+.+.++.+.. .+
T Consensus 1 mkilh~sD~Hlg~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~D~vl~~GDl~d~~~~~~~~~~~~~~~l~~l~~~~~ 76 (333)
T 1ii7_A 1 MKFAHLADIHLGYEQ----FHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIALLQIPKEHSI 76 (333)
T ss_dssp CEEEEECCCCBTCCG----GGCHHHHHHHHHHHHHHHHHHHHTTCSEEEEESCSBSSSSCCHHHHHHHHHHHHHHHTTTC
T ss_pred CEEEEEcccCCCCcc----cCCchhhHHHHHHHHHHHHHHHhcCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHCCC
Confidence 589999999987421 1000 00112334444432 268999999999996432 22345566666766654 68
Q ss_pred CeEEcCCCCccC
Q 007233 361 PYMIASGNHERD 372 (612)
Q Consensus 361 P~~~v~GNHD~~ 372 (612)
|+++++||||..
T Consensus 77 ~v~~v~GNHD~~ 88 (333)
T 1ii7_A 77 PVFAIEGNHDRT 88 (333)
T ss_dssp CEEEECCTTTCC
T ss_pred cEEEeCCcCCCc
Confidence 999999999974
No 26
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=98.64 E-value=4.1e-06 Score=89.77 Aligned_cols=258 Identities=13% Similarity=0.111 Sum_probs=122.7
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCc-hhHHHHHHHhhhh-----
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEP----- 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~----- 355 (612)
...+||++++|+|.+....... ........++++++. ..++|+|+++||++..... ......+++.++.
T Consensus 11 ~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~p~~~~~~~~~~~lr~~~~g~ 87 (417)
T 4fbw_A 11 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 87 (417)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEEcCCCCCcccccc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 4569999999999975421111 111123344444443 2689999999999855432 1222334444332
Q ss_pred -------h----------------------hcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCc
Q 007233 356 -------I----------------------ASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAK 406 (612)
Q Consensus 356 -------l----------------------~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~ 406 (612)
+ ...+|++++.||||..... .+....+.-.+.+. -..|.-. ...++
T Consensus 88 ~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~~~--~~~s~~~lL~~~g~--v~l~g~~-~~~~~ 162 (417)
T 4fbw_A 88 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGD--GRYSALDILQVTGL--VNYFGRV-PENDN 162 (417)
T ss_dssp CCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC-------CCCHHHHHHHTTS--CEECCCC-C---C
T ss_pred CcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcccc--ccccHHHHhccCCe--EEEeCCc-ccCCc
Confidence 2 1379999999999974211 10000000000000 0011000 00000
Q ss_pred e---EEEEEeCC--EEEEEEeCCCCCCCCHHH-HHHHHHHHhhc-cC---CCCCEEEEEEecccccCCCccccCCCCCCc
Q 007233 407 F---WYSTDYGM--FRFCVADTEHDWREGTEQ-YKFIEHCLASV-DR---QKQPWLIFLAHRVLGYSSGIFYAVDGSFAE 476 (612)
Q Consensus 407 ~---~Ysfd~G~--v~fi~Ldt~~~~~~~~~Q-~~WL~~~La~~-~r---~~~pwvIv~~H~P~~yss~~~~~~~~~~~~ 476 (612)
. -..+.-|. +.+.++.-.. .+. .+++++..... .. ....+.|++.|... ... +. ..+..
T Consensus 163 i~~~pv~l~~g~~~valyG~~~~~-----d~rl~r~~~~~~v~~~~p~~~~~~~~nIlvlH~~~-~~~----~~-~~yip 231 (417)
T 4fbw_A 163 IVVSPILLQKGFTKLALYGISNVR-----DERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNH-SAH----TP-TSYLP 231 (417)
T ss_dssp EEECCEEEEETTEEEEEEEECCCC-----HHHHHHHHHTTCEEEEEESTTTTTSEEEEEEESCS-SCS----SS-SSSCC
T ss_pred eeEEeEEEEecCceEEEEeccCCc-----hhhhhhhhhhhhhhhcCcccccCCceEEEEecCCc-cCC----CC-cccCc
Confidence 0 01234444 5555564221 121 13333222211 11 23457899999876 221 11 11111
Q ss_pred hhhHHHHHHHHHhcCCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeee
Q 007233 477 PMGRESLQKLWQKYKVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRD 556 (612)
Q Consensus 477 ~~~r~~l~~l~~k~~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~ 556 (612)
+ -+...++|+++.||.|..+...-. + ..+++..+-.|+.... .+. .-..
T Consensus 232 ----~----~l~~~~~DyvalGH~H~~~~~~~~-~-------------~~~g~~i~~PGS~~~~--s~~-------e~E~ 280 (417)
T 4fbw_A 232 ----E----SFIQDFYDFVLWGHEHECLIDGSY-N-------------PTQKFTVVQPGSTIAT--SLS-------PGET 280 (417)
T ss_dssp ----G----GGSCTTCSEEEEESCCSCEEEEEE-E-------------TTTTEEEEECCCSSCS--SCC-------HHHH
T ss_pred ----h----hHhhcCCCEEEecCccccceeccc-c-------------CCCCEEEEECCCCCcC--CCc-------cccC
Confidence 1 133568999999999997654200 0 0134444445543221 111 0001
Q ss_pred CceeEEEEEEecCCeEEEEEEECCCCc--EEEEEEEEe
Q 007233 557 YDYGFVKLTAFDHSNLLFEYKKSSDGK--VYDSFRISR 592 (612)
Q Consensus 557 ~~~Gy~~l~v~n~~~l~~~~~~~~dG~--v~D~f~i~k 592 (612)
...||..|++ ++..+.++++.-..=. +..++.+..
T Consensus 281 ~~kg~~lvei-~~~~~~~e~i~l~~~Rpf~~~~v~L~~ 317 (417)
T 4fbw_A 281 APKHCGILNI-TGKDFHLEKIRLRTVRPFIMKDIILSE 317 (417)
T ss_dssp SCCEEEEEEE-ETTEEEEEEEECSSSCCEEEEEEEGGG
T ss_pred CCCEEEEEEE-ECCEEEEEEEECCCcccEEEEEEEeec
Confidence 3568999998 5677889988633322 455555544
No 27
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=98.63 E-value=2.6e-07 Score=99.47 Aligned_cols=87 Identities=11% Similarity=0.174 Sum_probs=54.7
Q ss_pred CCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHh--cCCccEEEEeCcccccCCc-hhHHHHHHHhhhhh---
Q 007233 283 QNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQD--LKNIDIVFHIGDICYANGY-ISQWDQFTAQIEPI--- 356 (612)
Q Consensus 283 ~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~l--- 356 (612)
....+||++++|+|.+....... ........++++++. ..+||+||++||++..... ......+.+.++.+
T Consensus 29 ~~~~mrilhiSDlHLg~~~~~~~---~~~d~~~~l~~ll~~~~~~~~D~VliaGDlfd~~~~~~~~~~~~~~~L~r~~~~ 105 (431)
T 3t1i_A 29 DENTFKILVATDIHLGFMEKDAV---RGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKPSRKTLHTCLELLRKYCMG 105 (431)
T ss_dssp GGGEEEEEEECCCCBTTTSSCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCCBSSSSCCHHHHHHHHHHHHHHHBC
T ss_pred CCCCEEEEEEeccCCCCcccccc---hhhhHHHHHHHHHHHHhhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHHhcc
Confidence 34569999999999875421110 011122344444432 2689999999999955432 23344555555432
Q ss_pred -------------------------------hcCCCeEEcCCCCccC
Q 007233 357 -------------------------------ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 -------------------------------~s~vP~~~v~GNHD~~ 372 (612)
...+|++++.||||..
T Consensus 106 ~~~~~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~ 152 (431)
T 3t1i_A 106 DRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDP 152 (431)
T ss_dssp SSCCCCEECSCC------------------CCBCSCEEECCCSSSCC
T ss_pred CCcccceeccchhhccccccccccccccccccCCCcEEEEccCCCCc
Confidence 2379999999999974
No 28
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=98.62 E-value=1.5e-06 Score=94.02 Aligned_cols=86 Identities=16% Similarity=0.210 Sum_probs=52.7
Q ss_pred CCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCc-hhHHHHHHHhhhh-----
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY-ISQWDQFTAQIEP----- 355 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~-~~~wd~f~~~i~~----- 355 (612)
...+||++++|+|.+....... ........++++++.+ .+||+||++||++..... ......+++.+..
T Consensus 74 ~~~mrilhiSDlHLG~~~~~~~---~~~d~~~~l~~lv~~~~~~~~D~VliaGDLfd~~~ps~~a~~~~~~~Lr~~~~g~ 150 (472)
T 4fbk_A 74 ENTIRILISSDPHVGYGEKDPV---RGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGD 150 (472)
T ss_dssp TTCEEEEEECCCCBTTTTTCTT---TTTHHHHHHHHHHHHHHHTTCSEEEECSCSBSSSSCCHHHHHHHHHHHHHHHBSS
T ss_pred CCCeEEEEEecccCCCcccCcc---cchhHHHHHHHHHHHHHhcCCCEEEEcCccccCCCCCHHHHHHHHHHHHHhcccC
Confidence 4569999999999975421110 0111233444444432 689999999999955432 2222334444332
Q ss_pred -------h----------------------hcCCCeEEcCCCCccC
Q 007233 356 -------I----------------------ASTVPYMIASGNHERD 372 (612)
Q Consensus 356 -------l----------------------~s~vP~~~v~GNHD~~ 372 (612)
+ ...+|++++.||||..
T Consensus 151 ~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~ 196 (472)
T 4fbk_A 151 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDP 196 (472)
T ss_dssp CCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSC
T ss_pred CcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCc
Confidence 1 2379999999999974
No 29
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=98.11 E-value=7.7e-06 Score=90.51 Aligned_cols=200 Identities=15% Similarity=0.106 Sum_probs=90.4
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchH-HHHHHHHHhc--CCc-cEEEEeCcccccCCch--hHHHHHHHhhhhhhcC
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASL-NTTRQLIQDL--KNI-DIVFHIGDICYANGYI--SQWDQFTAQIEPIAST 359 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~-~~~~~i~~~~--~~p-Dfvl~~GDi~Y~~g~~--~~wd~f~~~i~~l~s~ 359 (612)
.++|++++|+|....... ...+....+ ..++++.++. .++ ++++.+||++...... ...+...+.+..+ .
T Consensus 8 ~l~Il~~~D~H~~~~~~~--~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g~~~~~~~~~~~~~~~ln~l--g 83 (516)
T 1hp1_A 8 KITVLHTNDHHGHFWRNE--YGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLV--G 83 (516)
T ss_dssp EEEEEEECCCTTCCSCCT--TSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSSCHHHHTTTTHHHHHHHHHH--T
T ss_pred EEEEEEecccccCccCCC--CCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCCcchhhhcCCcHHHHHHhcc--C
Confidence 489999999997532100 000111111 2233333321 135 7999999998432110 1112333334333 2
Q ss_pred CCeEEcCCCCccCCCCCCCCCCCCCCCCccccccc--eeeecCCC-CCCceEEEEEeCC--EEEEEEeCCCC--CC-C--
Q 007233 360 VPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAE--TMFYVPAE-NRAKFWYSTDYGM--FRFCVADTEHD--WR-E-- 429 (612)
Q Consensus 360 vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~--~~f~~P~~-~~~~~~Ysfd~G~--v~fi~Ldt~~~--~~-~-- 429 (612)
. -+.++||||+++... .+... -.+.+.++. +.+.-... ...+.|..++.++ +-|+.+.+... +. +
T Consensus 84 ~-d~~~~GNHEfd~g~~--~l~~~--~~~~~~~~l~aNv~~~~~g~~~~~~~~i~~~~G~kIgiiG~~~~~~~~~~~p~~ 158 (516)
T 1hp1_A 84 Y-DAMAIGNHEFDNPLT--VLRQQ--EKWAKFPLLSANIYQKSTGERLFKPWALFKRQDLKIAVIGLTTDDTAKIGNPEY 158 (516)
T ss_dssp C-CEEECCGGGGSSCHH--HHHHH--HHHCSSCEECSSEEETTTTEESSBSEEEEEETTEEEEEEEEECTTTTTSSSCCS
T ss_pred C-CEEeeccccccCCHH--HHHHH--HhhCCCCEEEeEEEECCCCCcccCCeEEEEECCEEEEEEEecccCcccccCcCc
Confidence 3 367899999964210 00000 000001100 00000000 0012355677887 55666765431 11 1
Q ss_pred --------CHH-HHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCc
Q 007233 430 --------GTE-QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHV 500 (612)
Q Consensus 430 --------~~~-Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~ 500 (612)
..+ -.+|+++ |++. .+...+|++.|.|. ..... .+.. ... ...+...+...+||++|+||.
T Consensus 159 ~~~~~~~d~~~~~~~~v~~-l~~~--~~~d~iI~l~H~g~-~~~~~----~~~~-~~~-~~~la~~~~~~~iDlilgGHt 228 (516)
T 1hp1_A 159 FTDIEFRKPADEAKLVIQE-LQQT--EKPDIIIAATHMGH-YDNGE----HGSN-APG-DVEMARALPAGSLAMIVGGHS 228 (516)
T ss_dssp CTTEEECCHHHHHHHHHHH-HHHH--TCCSEEEEEEESCC-CGGGC----CTTS-CCC-HHHHHHHSCTTSSSEEECCSS
T ss_pred cCCcEEeCHHHHHHHHHHH-HHhc--CCCCEEEEEecCCc-cCCCc----cccc-Cch-HHHHHHhCCCCceeEEECCCC
Confidence 012 2234433 4321 24567999999997 32211 1100 011 223443344456999999999
Q ss_pred ccce
Q 007233 501 HNYE 504 (612)
Q Consensus 501 H~Ye 504 (612)
|...
T Consensus 229 H~~~ 232 (516)
T 1hp1_A 229 QDPV 232 (516)
T ss_dssp CCBC
T ss_pred Cccc
Confidence 9854
No 30
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=98.11 E-value=1.9e-05 Score=88.16 Aligned_cols=189 Identities=14% Similarity=0.052 Sum_probs=89.1
Q ss_pred CCeEEEEEeecCCCCCCCCCcccc--cc--cchHHHHHHHHHhc--CCcc-EEEEeCcccccCCchh--HHHHHHHhhhh
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYND--FQ--YASLNTTRQLIQDL--KNID-IVFHIGDICYANGYIS--QWDQFTAQIEP 355 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~--~~--~~~~~~~~~i~~~~--~~pD-fvl~~GDi~Y~~g~~~--~wd~f~~~i~~ 355 (612)
..++|++++|+|...... .|.. .. .+....+..++++. .++| +++.+||++....... ......+.+..
T Consensus 28 ~~l~Il~~~D~H~~~~~~--~~~~~~~~~~~gg~~~~~~~v~~~r~~~~~~l~l~~GD~~~gs~~~~~~~~~~~~~~ln~ 105 (552)
T 2z1a_A 28 FTLTLVHTNDTHAHLEPV--ELTLSGEKTPVGGVARRVALFDRVWARAKNPLFLDAGDVFQGTLYFNQYRGLADRYFMHR 105 (552)
T ss_dssp CEEEEEEECCCTTCCSCE--EEECSSSEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSSSSHHHHHHTTHHHHHHHHH
T ss_pred eeEEEEEEcccccCcccc--cccCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCcHHHHHhCCcHHHHHHHh
Confidence 359999999999642110 0000 00 01122333333321 3577 8999999995432111 11222233332
Q ss_pred hhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccce--eee--cCC-CCCCceEEEEEeCC--EEEEEEeCCCC--
Q 007233 356 IASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAET--MFY--VPA-ENRAKFWYSTDYGM--FRFCVADTEHD-- 426 (612)
Q Consensus 356 l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~--~f~--~P~-~~~~~~~Ysfd~G~--v~fi~Ldt~~~-- 426 (612)
+ . +-+.++||||+++... .+.... .+.+.++.. ... -|. ....+.|..++.++ +-|+.+.+...
T Consensus 106 l--g-~d~~~lGNHEfd~g~~-~l~~~l---~~~~~~~L~aNv~~~~~~~~~~~~~~~~i~~~~G~kIgiiG~~~~~~~~ 178 (552)
T 2z1a_A 106 L--R-YRAMALGNHEFDLGPG-PLADFL---KGARFKVVSANVDASREPRLKGLFAPYAVVVVGGERVGIIGLTTPDTRE 178 (552)
T ss_dssp T--T-CCEEECCGGGGTTCHH-HHHHHH---TTCCSEEECTTEECTTCGGGTTSCBSEEEEEETTEEEEEEEEECTTHHH
T ss_pred c--C-CCccccccccccCCHH-HHHHHH---hhCCCCEEEEEEecCCCcccccccCCeEEEEECCEEEEEEEecccchhh
Confidence 2 2 3367899999974210 000000 001111100 000 000 00123456678887 55666665421
Q ss_pred ---------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 007233 427 ---------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAI 496 (612)
Q Consensus 427 ---------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~Vdlvl 496 (612)
+....++.+...+.|++ .+...+|++.|.|. . .+ ..+.++ .+||++|
T Consensus 179 ~~~~~~~~~~~d~~~~~~~~v~~l~~---~~~d~iIvL~H~g~-~-----------------~d--~~la~~~~gvDlIl 235 (552)
T 2z1a_A 179 ISNPGPTVAFLDPYESAQKAVYELLA---KGVNKIVVLSHLGY-G-----------------ED--LKLARRLVGVQVIV 235 (552)
T ss_dssp HSCCCTTCEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH-H-----------------HH--HHHHTTCSSCCEEE
T ss_pred ccCCCCCcEECCHHHHHHHHHHHHHh---cCCCEEEEEeCCCc-c-----------------hH--HHHHHhCCCccEEE
Confidence 01112333333344543 34556999999886 1 00 112233 5899999
Q ss_pred ecCccccee
Q 007233 497 YGHVHNYER 505 (612)
Q Consensus 497 sGH~H~YeR 505 (612)
+||.|...-
T Consensus 236 gGHtH~~~~ 244 (552)
T 2z1a_A 236 GGHSHTLLG 244 (552)
T ss_dssp ECSSCCCBS
T ss_pred eCCcCcccc
Confidence 999998654
No 31
>3qfk_A Uncharacterized protein; structural genomics, center for structural genomics of infec diseases, csgid, phosphoesterase, hydrolase; HET: MSE AKG; 2.05A {Staphylococcus aureus subsp}
Probab=98.02 E-value=0.00019 Score=79.43 Aligned_cols=205 Identities=11% Similarity=0.068 Sum_probs=90.4
Q ss_pred CCeEEEEEeecCCCCCCCCCcccc---cccchHHHHHHHHHhc--CCcc-EEEEeCcccccCCchhH--------HHHHH
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYND---FQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYISQ--------WDQFT 350 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~---~~~~~~~~~~~i~~~~--~~pD-fvl~~GDi~Y~~g~~~~--------wd~f~ 350 (612)
..++|+.++|+|..-... .|.. -..+.+..+..++++. .+++ +++.+||++.... ... .....
T Consensus 18 ~~l~Il~tnD~Hg~~~~~--~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~gs~-~~~~~~~~~~~~~~~~ 94 (527)
T 3qfk_A 18 SNIAFYVVSDVHGYIFPT--DFTSRNQYQPMGLLLANHVIEQDRRQYDQSFKIDNGDFLQGSP-FCNYLIAHSGSSQPLV 94 (527)
T ss_dssp CEEEEEEECCCTTCCSSC--CSSSTTCCCSCSHHHHHHHHHHHHTTSSEEEEEECSCCSSSSH-HHHHHHHTTCSSHHHH
T ss_pred CcEEEEEEeccCCCccCc--ccccCCCcCCCcHHHHHHHHHHHHhcCCCEEEEECCCcCCCcH-HHHHHhhcccCcchHH
Confidence 359999999999643210 0100 0111233344444331 3455 7788999995331 111 11222
Q ss_pred HhhhhhhcCCCeEEcCCCCccCCCCCC--CCCCCCCCCCccccccc--eeeecCCCCCCceEEEEEeCCE--EEEEEeCC
Q 007233 351 AQIEPIASTVPYMIASGNHERDWPGTG--SFYGNKDSGGECGVLAE--TMFYVPAENRAKFWYSTDYGMF--RFCVADTE 424 (612)
Q Consensus 351 ~~i~~l~s~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge~g~~~~--~~f~~P~~~~~~~~Ysfd~G~v--~fi~Ldt~ 424 (612)
+.+..+ ... +.++||||+++.... .++. ++..|+. +..........+.|.-++.+++ -||.+.+.
T Consensus 95 ~~ln~l--g~D-~~t~GNHefd~G~~~l~~~~~------~~~~p~l~aNv~~~g~p~~~~py~i~e~~G~kIgviG~~~~ 165 (527)
T 3qfk_A 95 DFYNRM--AFD-FGTLGNHEFNYGLPYLKDTLR------RLNYPVLCANIYENDSTLTDNGVKYFQVGDQTVGVIGLTTQ 165 (527)
T ss_dssp HHHHHT--CCC-EECCCGGGGTTCHHHHHHHHH------HCSSCBCCSSEEETTEESSSCSEEEEEETTEEEEEEEEECT
T ss_pred HHHHhc--CCc-EEeccccccccCHHHHHHHHH------hCCCCEEEeEeeeCCCCccCCCEEEEEECCEEEEEEEeccC
Confidence 222222 333 567999998742100 0000 0000000 0000000000123566778874 55666654
Q ss_pred CC--CCC--------CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeE
Q 007233 425 HD--WRE--------GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDI 494 (612)
Q Consensus 425 ~~--~~~--------~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vdl 494 (612)
.. +.. -....+.+++.+++.. .+...+|++.|.+...........+....+.. ..+|..-+ ..+||+
T Consensus 166 ~~~~~~~~~~~~g~~~~d~~~~~~~~v~~l~-~~~D~iIvl~H~G~~~d~~~~~~~~~~~~e~~-~~~la~~~-~~giDl 242 (527)
T 3qfk_A 166 FIPHWEQPEHIQSLTFHSAFEILQQYLPEMK-RHADIIVVCYHGGFEKDLESGTPTEVLTGENE-GYAMLEAF-SKDIDI 242 (527)
T ss_dssp TGGGTSCHHHHTTEEECCHHHHHHHHHHHHH-HHCSEEEEEEECCCSBCTTTCCBSSCCSSSCC-HHHHHHHH-GGGCSE
T ss_pred CcccccCccccCCcEEcCHHHHHHHHHHHHH-hCCCEEEEEeCcCcccccccCccccccccchH-HHHHHHhc-CCCCcE
Confidence 21 111 0123344444444432 34567999999875221100000000001111 11232222 258999
Q ss_pred EEecCcccce
Q 007233 495 AIYGHVHNYE 504 (612)
Q Consensus 495 vlsGH~H~Ye 504 (612)
+|+||.|...
T Consensus 243 IlgGHtH~~~ 252 (527)
T 3qfk_A 243 FITGHQHRQI 252 (527)
T ss_dssp EECCSSCCEE
T ss_pred EEECCCCccc
Confidence 9999999854
No 32
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=97.85 E-value=0.00011 Score=82.43 Aligned_cols=192 Identities=15% Similarity=0.111 Sum_probs=88.3
Q ss_pred CCCeEEEEEeecCCCCCCCCCccc------ccccchHHHHHHHHHhc--CCcc-EEEEeCcccccCCch--hHHHHHHHh
Q 007233 284 NSLQRVVIFGDMGKDEADGSNEYN------DFQYASLNTTRQLIQDL--KNID-IVFHIGDICYANGYI--SQWDQFTAQ 352 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~~~~------~~~~~~~~~~~~i~~~~--~~pD-fvl~~GDi~Y~~g~~--~~wd~f~~~ 352 (612)
.-.++|+.++|+|..-......|. .-..+.+..+..++++. .+++ +++..||++...... .......+.
T Consensus 10 ~~~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ 89 (579)
T 3ztv_A 10 AVELSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKKYKNPLVLHAGDAITGTLYFTLFGGSADAAV 89 (579)
T ss_dssp CEEEEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHHSSSEEEEECSCCSCSSHHHHTTTTHHHHHH
T ss_pred ceEEEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhhCCCEEEEeCCCCCCCceeeeecCCHHHHHH
Confidence 345899999999954221000000 00011133333333321 2344 899999999543211 111222233
Q ss_pred hhhhhcCCCeEEcCCCCccCCCCCC--CCCCCCCCCCccccccc--eeeecCCC---CCCceEEEEEeCCE--EEEEEeC
Q 007233 353 IEPIASTVPYMIASGNHERDWPGTG--SFYGNKDSGGECGVLAE--TMFYVPAE---NRAKFWYSTDYGMF--RFCVADT 423 (612)
Q Consensus 353 i~~l~s~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge~g~~~~--~~f~~P~~---~~~~~~Ysfd~G~v--~fi~Ldt 423 (612)
+..+ ... ++++||||+++.... .++. +++.|+. +...-... ..-+.|.-++.+++ -||.+.+
T Consensus 90 ln~l--g~D-~~tlGNHEfd~G~~~l~~~~~------~~~fp~l~aNv~~~~~~~~~~~~~py~i~~~~G~kIgviG~t~ 160 (579)
T 3ztv_A 90 MNAG--NFH-YFTLGNHEFDAGNEGLLKLLE------PLKIPVLSANVIPDKSSILYNKWKPYDIFTVDGEKIAIIGLDT 160 (579)
T ss_dssp HHHH--TCS-EEECCSGGGTTHHHHHHHHHT------TCCSCEECSSEEECTTSTTTTSCBSEEEEEETTEEEEEEEEEC
T ss_pred HHhc--CcC-eeeccccccccCHHHHHHHHH------hcCCCeeeeeEeccCCcccccccCCeEEEEECCEEEEEEEEEc
Confidence 3322 233 467999998742100 0000 0011110 00000000 01123556778874 4566644
Q ss_pred -CC-----CCCCC---HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCe
Q 007233 424 -EH-----DWREG---TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVD 493 (612)
Q Consensus 424 -~~-----~~~~~---~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~Vd 493 (612)
.. ....+ .+..+-+++.+++........+|++.|.+. .. ... +.++ .+||
T Consensus 161 ~~~~~~~~~p~~~~~f~d~~~~~~~~v~~lk~~g~d~iI~l~H~G~--~~---------------d~~---la~~~~giD 220 (579)
T 3ztv_A 161 VNKTVNSSSPGKDVKFYDEIATAQIMANALKQQGINKIILLSHAGS--EK---------------NIE---IAQKVNDID 220 (579)
T ss_dssp SHHHHHHSCCCTTEEECCHHHHHHHHHHHHHTTTCCCEEEEEETCH--HH---------------HHH---HHHHCSSCC
T ss_pred CCccccccCCCCCceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCc--hh---------------hHH---HHHhCCCCC
Confidence 10 00000 122344555554443234567999999775 00 112 2222 4799
Q ss_pred EEEecCcccce
Q 007233 494 IAIYGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|.||.|...
T Consensus 221 lIlgGHtH~~~ 231 (579)
T 3ztv_A 221 VIVTGDSHYLY 231 (579)
T ss_dssp EEEECSSCCEE
T ss_pred EEEeCCCCccc
Confidence 99999999866
No 33
>2z06_A Putative uncharacterized protein TTHA0625; metal binding protein, structural genomics, NPPSFA; 2.20A {Thermus thermophilus} SCOP: d.159.1.10 PDB: 2cv9_A
Probab=97.82 E-value=0.00029 Score=70.22 Aligned_cols=170 Identities=15% Similarity=0.194 Sum_probs=85.1
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCccccc-CCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYA-NGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~-~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.|++++||.=.. ++ ...++.++++. +. |+++..|..+.. .+.. +...+.+..+ .+-.+
T Consensus 1 m~ilfiGDi~g~------------~G-~~~v~~~l~~lr~~~-d~vi~ngen~~~G~g~~---~~~~~~l~~~--G~D~~ 61 (252)
T 2z06_A 1 MRVLFIGDVMAE------------PG-LRAVGLHLPDIRDRY-DLVIANGENAARGKGLD---RRSYRLLREA--GVDLV 61 (252)
T ss_dssp CEEEEECCBCHH------------HH-HHHHHHHHHHHGGGC-SEEEEECTTTTTTSSCC---HHHHHHHHHH--TCCEE
T ss_pred CEEEEEEecCCc------------cc-HHHHHHHHHHHHhhC-CEEEEeCCCccCCCCcC---HHHHHHHHhC--CCCEE
Confidence 479999998321 12 22333333321 33 888887777633 3332 2222223222 45555
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecCCCCCCceEEEEEeCCEEEEEEe--CCCCCCCCHHHHHHHHHHH
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVPAENRAKFWYSTDYGMFRFCVAD--TEHDWREGTEQYKFIEHCL 441 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P~~~~~~~~Ysfd~G~v~fi~Ld--t~~~~~~~~~Q~~WL~~~L 441 (612)
+.||||++..+.-.+.+... . -.--++|....++.|.-++.++.++-+++ .......-..-.+-+++.+
T Consensus 62 -T~GNHefD~~~l~~~l~~~~----~----vrpaN~~~~~pg~~~~i~~~~G~kIgVi~l~g~~~~~~~~~pf~~~~~~v 132 (252)
T 2z06_A 62 -SLGNHAWDHKEVYALLESEP----V----VRPLNYPPGTPGKGFWRLEVGGESLLFVQVMGRIFMDPLDDPFRALDRLL 132 (252)
T ss_dssp -ECCTTTTSCTTHHHHHHHSS----E----ECCTTSCSSCSSCSEEEEEETTEEEEEEEEECCTTSCCCCCHHHHHHHHH
T ss_pred -EeccEeeECchHHHHhccCC----c----eEeecCCCCCCCCCeEEEEECCEEEEEEEcccccCccccCCHHHHHHHHH
Confidence 67999998531111110000 0 00012232223456777888886665554 3322111122233456666
Q ss_pred hhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 442 ASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 442 a~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
++.. .+.+|+.+|.-. ++ + .+.+. .+...+||+++.||+|...
T Consensus 133 ~~lk---~d~IIv~~H~g~--ts-----------e---k~~la-~~~dg~Vd~VvGgHTHv~t 175 (252)
T 2z06_A 133 EEEK---ADYVLVEVHAEA--TS-----------E---KMALA-HYLDGRASAVLGTHTHVPT 175 (252)
T ss_dssp HHCC---CSEEEEEEECSC--HH-----------H---HHHHH-HHHBTTBSEEEEESSCSCB
T ss_pred HHhC---CCEEEEEeCCCc--HH-----------H---HHHHH-HhCCCCeEEEEcCCCCcCC
Confidence 6652 677999999431 11 1 11222 2234579999999999843
No 34
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=97.82 E-value=4.8e-05 Score=84.69 Aligned_cols=191 Identities=11% Similarity=0.068 Sum_probs=89.8
Q ss_pred CCeEEEEEeecCCCCCCCCCcccc------cccchHHHHHHHHHhc--CCc-cEEEEeCcccccCCchh--HHHHHHHhh
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYND------FQYASLNTTRQLIQDL--KNI-DIVFHIGDICYANGYIS--QWDQFTAQI 353 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~------~~~~~~~~~~~i~~~~--~~p-Dfvl~~GDi~Y~~g~~~--~wd~f~~~i 353 (612)
..++|+.++|+|..-... ..+.. -..+.+..+..++++. .++ ++++.+||++....... ......+.+
T Consensus 24 ~~l~Il~~nD~Hg~~~~~-~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l 102 (546)
T 4h2g_A 24 WELTILHTNDVHSRLEQT-SEDSSKCVDASRCMGGVARLFTKVQQIRRAEPNVLLLDAGDQYQGTIWFTVYKGAEVAHFM 102 (546)
T ss_dssp EEEEEEEECCCTTCCSCB-CTTSSBCSSGGGCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSSHHHHHHTTHHHHHHH
T ss_pred eEEEEEEecccccCCccc-ccccccccccccccCCHHHHHHHHHHHHhhCCCEEEEECCccCCCchhhhhhCChHHHHHH
Confidence 459999999999643210 00000 0011123333333321 234 69999999995432211 112233333
Q ss_pred hhhhcCCCeEEcCCCCccCCCCC--C-CCCCCCCCCCccccccc--eeee----cCC-CCCCceEEEEEeCCEE--EEEE
Q 007233 354 EPIASTVPYMIASGNHERDWPGT--G-SFYGNKDSGGECGVLAE--TMFY----VPA-ENRAKFWYSTDYGMFR--FCVA 421 (612)
Q Consensus 354 ~~l~s~vP~~~v~GNHD~~~~~~--~-~~y~~~dsgge~g~~~~--~~f~----~P~-~~~~~~~Ysfd~G~v~--fi~L 421 (612)
..+ .+. +.++||||+++... . .++. +++.++. +... -|. ....+.|.-++.++++ ||.+
T Consensus 103 n~l--g~d-~~~~GNHEfd~g~~~l~~~~~~------~~~~~~l~aNv~~~~~~~p~~~~~~~~~~i~~~~G~kIgiiG~ 173 (546)
T 4h2g_A 103 NAL--RYD-AMALGNHEFDNGVEGLIEPLLK------EAKFPILSANIKAKGPLASQISGLYLPYKVLPVGDEVVGIVGY 173 (546)
T ss_dssp HHH--TCS-EEECCGGGGTTHHHHHHTTTTT------TCSSCEECSSEEECHHHHHHHBTTBBSEEEEEETTEEEEEEEE
T ss_pred Hhc--CCc-EEeccCcccccCHHHHHHHHHh------hcCCCEEEEEeecCCCCCccccccCCCeEEEEECCEEEEEEEe
Confidence 332 334 56799999974210 0 1111 1111110 0000 000 0012345667888855 5565
Q ss_pred eCCCC--C-CCC-----HHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCe
Q 007233 422 DTEHD--W-REG-----TEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVD 493 (612)
Q Consensus 422 dt~~~--~-~~~-----~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~Vd 493 (612)
.+... + .++ .+..+.+++.+++.+......+|++.|.+.. . ...+...+ .+||
T Consensus 174 ~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~l~~~g~D~iI~l~H~g~~--~---------------d~~la~~~--~giD 234 (546)
T 4h2g_A 174 TSKETPFLSNPGTNLVFEDEITALQPEVDKLKTLNVNKIIALGHSGFE--M---------------DKLIAQKV--RGVD 234 (546)
T ss_dssp ECTTHHHHSCCCSSEEECCHHHHHHHHHHHHHHTTCCCEEEEEESCHH--H---------------HHHHHHHS--TTCC
T ss_pred cccccccccCCCCCcEEccHHHHHHHHHHHHHhcCCCEEEEEeccCcc--c---------------hHHHHHhC--CCCc
Confidence 54321 0 010 1233444544444322345679999998750 0 11222211 4799
Q ss_pred EEEecCcccce
Q 007233 494 IAIYGHVHNYE 504 (612)
Q Consensus 494 lvlsGH~H~Ye 504 (612)
++|+||.|...
T Consensus 235 lIlgGHtH~~~ 245 (546)
T 4h2g_A 235 VVVGGHSNTFL 245 (546)
T ss_dssp EEECCSSCCCC
T ss_pred EEEeCCcCccc
Confidence 99999999854
No 35
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=97.79 E-value=0.00014 Score=80.26 Aligned_cols=203 Identities=14% Similarity=0.099 Sum_probs=89.1
Q ss_pred CeEEEEEeecCCCCCCCCCcccc---cccchHHHHHHHHHhc--CCccEEEE-eCcccccCCchh---HHHHHHHhhhhh
Q 007233 286 LQRVVIFGDMGKDEADGSNEYND---FQYASLNTTRQLIQDL--KNIDIVFH-IGDICYANGYIS---QWDQFTAQIEPI 356 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~---~~~~~~~~~~~i~~~~--~~pDfvl~-~GDi~Y~~g~~~---~wd~f~~~i~~l 356 (612)
.++|+.++|+|..-......|.. -..+....+..++++. .+++.+++ +||++... ... ..+...+.+..
T Consensus 6 ~l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~~~~~llldaGD~~~g~-~~~~~~~g~~~~~~ln~- 83 (509)
T 3ive_A 6 DVTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAKNKATWFFDAGDYFTGP-YISSLTKGKAIIDIMNT- 83 (509)
T ss_dssp EEEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHHCSSEEEEECSCCSSSS-HHHHTTTTHHHHHHHTT-
T ss_pred EEEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhcCCCeEEEECCCCCCCc-hhhhhcCChHHHHHHHh-
Confidence 48999999999543211100100 0011233334443321 35676655 99999532 111 11222222222
Q ss_pred hcCCCeEEcCCCCccCCCCCC--CCCCCCCCCCccccccc--eeeecCCCC-C-CceEEEEEeCCE--EEEEEeCCC---
Q 007233 357 ASTVPYMIASGNHERDWPGTG--SFYGNKDSGGECGVLAE--TMFYVPAEN-R-AKFWYSTDYGMF--RFCVADTEH--- 425 (612)
Q Consensus 357 ~s~vP~~~v~GNHD~~~~~~~--~~y~~~dsgge~g~~~~--~~f~~P~~~-~-~~~~Ysfd~G~v--~fi~Ldt~~--- 425 (612)
--+-++++||||+++.... .++. +++.|+- +.+.-.... . .+.|.-++.+++ -||.+-+..
T Consensus 84 --lg~D~~tlGNHEfd~G~~~l~~~l~------~~~~p~l~aNv~~~~~~~p~~~~py~i~e~~G~kIgiiG~t~~~~~~ 155 (509)
T 3ive_A 84 --MPFDAVTIGNHEFDHGWDNTLLQLS------QAKFPIVQGNIFYQNSSKSFWDKPYTIIEKDGVKIGVIGLHGVFAFN 155 (509)
T ss_dssp --SCCSEECCCGGGGTTCHHHHHHHHT------TCSSCBCCCSEEETTSCCBSSSCSEEEEEETTEEEEEEEEECHHHHH
T ss_pred --cCCcEEeecccccccCHHHHHHHHh------hCCCCEEEEEEEECCCCCccCcCCeEEEEECCEEEEEEecccCcccc
Confidence 1234567899998752100 0000 0001110 000000000 0 233556788884 456664321
Q ss_pred --CCC---C---CHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEE
Q 007233 426 --DWR---E---GTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAI 496 (612)
Q Consensus 426 --~~~---~---~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~Vdlvl 496 (612)
.+. . -.+..+.+++.+++.+ .+...+|++.|.++.+..... ......... ..-..+.++ .+||++|
T Consensus 156 ~~~~~~~~~g~~~~d~~~~~~~~v~~Lk-~~~D~iIvl~H~G~~~~~~~~--~~~~~~~~~--~~d~~la~~~~giDlIl 230 (509)
T 3ive_A 156 DTVSAATRVGIEARDEIKWLQRYIDELK-GKVDLTVALIHEGVPARQSSM--GGTDVRRAL--DKDIQTASQVKGLDILI 230 (509)
T ss_dssp HHSCGGGCTTEEECCHHHHHHHHHHHHT-TTCSEEEEEEECSSCCCCCCC-----CCCCCC--HHHHHHHHHCSSCCEEE
T ss_pred cccccccCCCCEEcCHHHHHHHHHHHHH-hcCCEEEEEeccCcCCccccc--ccccccccc--chHHHHHhcCCCCcEEE
Confidence 010 0 1233445555555543 236778999998752222111 000000001 111233333 3799999
Q ss_pred ecCcccc
Q 007233 497 YGHVHNY 503 (612)
Q Consensus 497 sGH~H~Y 503 (612)
+||.|..
T Consensus 231 gGHtH~~ 237 (509)
T 3ive_A 231 TGHAHVG 237 (509)
T ss_dssp EESSCCC
T ss_pred eCCcCcc
Confidence 9999963
No 36
>2wdc_A SOXB, sulfur oxidation protein SOXB; sulfur-sulfur hydrolysis, sulfur oxidation pathway, Cys S-thiosulfonate, hydrolase; 1.50A {Thermus thermophilus} PDB: 2wdd_A* 2wde_A 2wdf_A
Probab=97.72 E-value=0.00033 Score=78.16 Aligned_cols=42 Identities=19% Similarity=0.183 Sum_probs=25.7
Q ss_pred cc-EEEEeCcccccCCchhHH---HHHHHhhhhhhcCCCeEEcCCCCccCC
Q 007233 327 ID-IVFHIGDICYANGYISQW---DQFTAQIEPIASTVPYMIASGNHERDW 373 (612)
Q Consensus 327 pD-fvl~~GDi~Y~~g~~~~w---d~f~~~i~~l~s~vP~~~v~GNHD~~~ 373 (612)
+| +++.+||++.... ...+ +...+.+..+ ..+++ + ||||+++
T Consensus 123 pd~Lll~~GD~~~gs~-~~~~~~g~~~~~~ln~l--g~d~~-~-GNHEfd~ 168 (562)
T 2wdc_A 123 GKALVLDGGDTWTNSG-LSLLTRGEAVVRWQNLV--GVDHM-V-SHWEWTL 168 (562)
T ss_dssp CCEEEEECSCCSSSSH-HHHHHTTHHHHHHHHHH--TCCEE-C-CSGGGGG
T ss_pred CCEEEEeCCCCCCcch-hhhhhCCHHHHHHHHhh--CCcEE-e-cchhccc
Confidence 88 9999999995432 2222 2223333333 46665 6 9999864
No 37
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=97.62 E-value=8.1e-05 Score=72.22 Aligned_cols=82 Identities=9% Similarity=0.208 Sum_probs=44.8
Q ss_pred cccceEEEEcCCCCCCCCCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCc---
Q 007233 268 IWSSEYQFKASPYPGQNSLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGY--- 342 (612)
Q Consensus 268 ~~S~~~~F~T~p~~g~~~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~--- 342 (612)
.|+....|.+.. -+|++++||+|... ..++++++.. .++|+|+++||+++....
T Consensus 13 ~~~~~~~~~~~~------mmki~~iSD~H~~~---------------~~l~~~l~~~~~~~~d~vi~~GDl~~~g~~~~~ 71 (208)
T 1su1_A 13 LGTENLYFQSNA------MMKLMFASDIHGSL---------------PATERVLELFAQSGAQWLVILGDVLNHGPRNAL 71 (208)
T ss_dssp ------------------CCEEEEECCCTTBH---------------HHHHHHHHHHHHHTCSEEEECSCCSCCCTTSCC
T ss_pred cCcccceecccc------cEEEEEEEcCCCCH---------------HHHHHHHHHHHhcCCCEEEECCCccccCccccc
Confidence 455555564322 27999999999531 2233333322 479999999999954221
Q ss_pred hhH--HHHHHHhhhhhhcCCCeEEcCCCCccC
Q 007233 343 ISQ--WDQFTAQIEPIASTVPYMIASGNHERD 372 (612)
Q Consensus 343 ~~~--wd~f~~~i~~l~s~vP~~~v~GNHD~~ 372 (612)
..+ -.+..+.++.+ ..|++.++||||..
T Consensus 72 ~~~~~~~~~~~~l~~~--~~~v~~V~GNHD~~ 101 (208)
T 1su1_A 72 PEGYAPAKVVERLNEV--AHKVIAVRGNCDSE 101 (208)
T ss_dssp CTTBCHHHHHHHHHTT--GGGEEECCCTTCCH
T ss_pred ccccCHHHHHHHHHhc--CCceEEEECCCchH
Confidence 111 13445555443 25899999999974
No 38
>1t70_A Phosphatase; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI, protein STR initiative; 2.30A {Deinococcus radiodurans} SCOP: d.159.1.9
Probab=97.54 E-value=0.0013 Score=65.70 Aligned_cols=172 Identities=12% Similarity=0.062 Sum_probs=84.9
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccC-CchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.|++++||.= +. ++ ...++.++++. +. |+++..|+.+... +... ...+.+..+ .+-.+
T Consensus 1 m~ilf~GDv~-g~-----------~G-~~~~~~~l~~lr~~~-d~vi~nge~~~~G~g~~~---~~~~~l~~~--G~Da~ 61 (255)
T 1t70_A 1 MRVLFIGDVF-GQ-----------PG-RRVLQNHLPTIRPQF-DFVIVNMENSAGGFGMHR---DAARGALEA--GAGCL 61 (255)
T ss_dssp CEEEEECCBB-HH-----------HH-HHHHHHHHHHHGGGC-SEEEEECTBTTTTSSCCH---HHHHHHHHH--TCSEE
T ss_pred CEEEEEeccC-Ch-----------HH-HHHHHHHHHHHHhhC-CEEEECCCCccCCcCCCH---HHHHHHHhC--CCCEE
Confidence 4799999983 11 11 23344444332 23 9999988888443 3321 222222221 44444
Q ss_pred EcCCCCccCCCCCCCCCCCCCCCCccccccceeeecC-CCCCCceEEEEEeCCEEE--EEEeCCCCCCCCHHHHHHHHHH
Q 007233 364 IASGNHERDWPGTGSFYGNKDSGGECGVLAETMFYVP-AENRAKFWYSTDYGMFRF--CVADTEHDWREGTEQYKFIEHC 440 (612)
Q Consensus 364 ~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~~f~~P-~~~~~~~~Ysfd~G~v~f--i~Ldt~~~~~~~~~Q~~WL~~~ 440 (612)
+.||||++......+.+.. . . .+. .--++| ....++.|.-++.++.++ +.|-+......-..-.+-+++.
T Consensus 62 -TlGNHefD~~~l~~~l~~~---~-~-~~~-~~aN~~~~~~pg~g~~I~~~~G~kIgVigl~g~~~~~~~~~p~~~~~~~ 134 (255)
T 1t70_A 62 -TLGNHAWHHKDIYPMLSED---T-Y-PIV-RPLNYADPGTPGVGWRTFDVNGEKLTVVNLLGRVFMEAVDNPFRTMDAL 134 (255)
T ss_dssp -ECCTTTTSSTTHHHHHHTT---C-S-CEE-CCSCCCCTTCSSCSEEEEECSSSEEEEEEEECCTTSCCCSCHHHHHHHH
T ss_pred -EeccccccCchHHHHHhhC---C-C-cEE-EEeccCCCCCCCCCeEEEEECCEEEEEEEeecCcCcccccCHHHHHHHH
Confidence 5699999853111111000 0 0 000 001122 222345566788887554 5454442221122224446666
Q ss_pred HhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 441 LASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 441 La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
+++. +...+|+.+|.-. ++ + .+.+.. ....+||+++.||+|...
T Consensus 135 v~~l---~~d~IIv~~H~e~--t~-----------E---k~~la~-~~dg~vd~VvGgHTHv~~ 178 (255)
T 1t70_A 135 LERD---DLGTVFVDFHAEA--TS-----------E---KEAMGW-HLAGRVAAVIGTHTHVPT 178 (255)
T ss_dssp TTCS---SCCEEEEEEECSC--HH-----------H---HHHHHH-HHTTSSSEEEEESSCSCB
T ss_pred HHHh---CCCEEEEEeCCCC--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 6654 4667999999421 11 1 112222 224569999999999854
No 39
>1t71_A Phosphatase, conserved HYPO; crystal, X-RAY crystallography, structural GENO berkeley structural genomics center, BSGC, PSI; 2.10A {Mycoplasma pneumoniae M129} SCOP: d.159.1.9
Probab=97.41 E-value=0.0016 Score=65.93 Aligned_cols=172 Identities=13% Similarity=0.047 Sum_probs=87.9
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccch---HHHHHHHHHhcCCccEEEEeCcccccC-CchhHHHHHHHhhhhhhcCCC
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYAS---LNTTRQLIQDLKNIDIVFHIGDICYAN-GYISQWDQFTAQIEPIASTVP 361 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~pDfvl~~GDi~Y~~-g~~~~wd~f~~~i~~l~s~vP 361 (612)
.+||+++||.+.. ++. ...++++.++ .++|+++..||.+... +.. ....+.+..+ .+-
T Consensus 4 ~m~ilf~GDv~G~------------~G~~~l~~~l~~lr~~-~~~d~vi~Ngen~~gG~g~~---~~~~~~ln~~--G~D 65 (281)
T 1t71_A 4 SIKFIFLGDVYGK------------AGRNIIKNNLAQLKSK-YQADLVIVNAENTTHGKGLS---LKHYEFLKEA--GVN 65 (281)
T ss_dssp CCEEEEECEEBHH------------HHHHHHHTTHHHHHHH-HTCSEEEEECTBTTTTSSCC---HHHHHHHHHH--TCC
T ss_pred eEEEEEECCcCCh------------HHHHHHHHHHHHHHHh-cCCCEEEEcCCCCCCCCCcC---HHHHHHHHhc--CCC
Confidence 3799999999732 121 1234444433 2589999999998543 332 2222222221 334
Q ss_pred eEEcCCCCccCCC-CCCCCCCCCCCCCccccccceeeecCCCC----CCceEEEEEeCCEE--EEEEeCCCCCCC--CHH
Q 007233 362 YMIASGNHERDWP-GTGSFYGNKDSGGECGVLAETMFYVPAEN----RAKFWYSTDYGMFR--FCVADTEHDWRE--GTE 432 (612)
Q Consensus 362 ~~~v~GNHD~~~~-~~~~~y~~~dsgge~g~~~~~~f~~P~~~----~~~~~Ysfd~G~v~--fi~Ldt~~~~~~--~~~ 432 (612)
. .++||||++.. +.-.|.+ .. ..-.+ -++|... .+..|.-++.++++ +|.+-+...+.+ -..
T Consensus 66 a-~TlGNHefD~g~~~~~~l~---~~-~~v~~----aN~p~~~~~~~~g~g~~I~e~~G~kIgVIgl~g~~~f~~~~~~~ 136 (281)
T 1t71_A 66 Y-ITMGNHTWFQKLDLAVVIN---KK-DLVRP----LNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTN 136 (281)
T ss_dssp E-EECCTTTTCCGGGHHHHTT---CT-TEECB----SCBCTTSTTTTSSBSEEEEECSSCEEEEEEEECTTSCCSSCBCC
T ss_pred E-EEEccCcccCCccHHHHhh---hc-CEEee----ccCCcccccccCCCCeEEEEECCEEEEEEEeeccccccCccccC
Confidence 4 46799999854 1101111 00 00000 1112111 23456678888755 455544431221 122
Q ss_pred HHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 433 QYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 433 Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
-.+-+++.++ +.+...+|+.+|.-. ++ + .+.+.. .-..+||+++.||+|...
T Consensus 137 pf~~a~~~v~---~~~~diIIv~~H~g~--t~-----------E---k~~la~-~~dg~VD~VvGgHTHv~t 188 (281)
T 1t71_A 137 PFKVLKELIL---KRDCDLHIVDFHAET--TS-----------E---KNAFCM-AFDGYVTTIFGTHTHVPS 188 (281)
T ss_dssp HHHHHHHHHT---TCCCSEEEEEEECSC--HH-----------H---HHHHHH-HHTTTSSEEEEESSSSCC
T ss_pred HHHHHHHHHh---hcCCCEEEEEeCCCc--hH-----------H---HHHHHH-hCCCCeEEEEeCCCCcCC
Confidence 2445555555 356788999999421 10 1 112222 223469999999999854
No 40
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.36 E-value=0.0016 Score=55.65 Aligned_cols=99 Identities=15% Similarity=0.118 Sum_probs=60.9
Q ss_pred CCCcceeeecCC-CCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 167 NAPVYPRLAQGK-TWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 167 ~~p~~~~La~~~-~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
.+|..+++.... +.++++|+|......+ -..-.|+|......... .-..... .+....+
T Consensus 10 ~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~-----------------~~~~~~~ 71 (114)
T 2ede_A 10 SAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPID-DWIMETI-----------------SGDRLTH 71 (114)
T ss_dssp SCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTT-TSEEEEE-----------------ETTCCEE
T ss_pred CCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCcc-ceEEEEE-----------------CCCceEE
Confidence 567666665543 4789999998764211 01244555543221100 0000110 1223457
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~ 283 (612)
+|++|+|++.|.+||......|...||+...|+|.+.+..
T Consensus 72 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 111 (114)
T 2ede_A 72 QIMDLNLDTMYYFRIQARNSKGVGPLSDPILFRTLKVSGP 111 (114)
T ss_dssp EECSCCSSCEEEEEEEEECSSCBCCCCCCEEEECCCSSCC
T ss_pred EEcCCCCCCEEEEEEEEEeCCcCcCCcccEEEEecCCCCC
Confidence 8999999999999998775556677899999999876543
No 41
>3c9f_A 5'-nucleotidase; 2',3'-cyclic phosphodiesterase, protein STR initiative, PSI-2, NEW YORK SGX research center for structu genomics, nysgxrc; 1.90A {Candida albicans} SCOP: d.114.1.1 d.159.1.2
Probab=97.23 E-value=0.0019 Score=71.97 Aligned_cols=86 Identities=17% Similarity=0.110 Sum_probs=42.8
Q ss_pred CCCeEEEEEeecCCCCCCCCC--cccccccchHHHHHHHHHh---cCCcc-EEEEeCcccccCCchh----HHHHHHHhh
Q 007233 284 NSLQRVVIFGDMGKDEADGSN--EYNDFQYASLNTTRQLIQD---LKNID-IVFHIGDICYANGYIS----QWDQFTAQI 353 (612)
Q Consensus 284 ~~~~rf~v~GD~g~~~~~~~~--~~~~~~~~~~~~~~~i~~~---~~~pD-fvl~~GDi~Y~~g~~~----~wd~f~~~i 353 (612)
...++|+.++|+|........ .|.. .-+.+..+...+++ ..+++ +++.+||++....... ..+...+.+
T Consensus 13 ~~~l~ILhtnD~Hg~~~~~~~~~~~~~-~~Gg~a~l~~~i~~~~~~~~~~~LlldaGD~~~Gs~~~~~~~~~g~~~~~~l 91 (557)
T 3c9f_A 13 WNDINFVHTTDTHGWYSGHINQPLYHA-NWGDFISFTTHMRRIAHSRNQDLLLIDSGDRHDGNGLSDITSPNGLKSTPIF 91 (557)
T ss_dssp CCSEEEEEECCCTTCTTCCSSCGGGCC-CHHHHHHHHHHHHHHHHHTTCEEEEEECSCCCSSCHHHHSSSSTTTTTHHHH
T ss_pred ceEEEEEEEcccccCccCccccccccc-ccchHHHHHHHHHHHHHhcCCCEEEEecCCCCCCccchhhcccCCHHHHHHH
Confidence 346999999999975321110 0100 01112223333332 25677 5799999994322111 111112222
Q ss_pred hhhhcCCCeEEcCCCCccCC
Q 007233 354 EPIASTVPYMIASGNHERDW 373 (612)
Q Consensus 354 ~~l~s~vP~~~v~GNHD~~~ 373 (612)
..+ .+- +.++||||+++
T Consensus 92 n~l--g~D-a~tlGNHEfD~ 108 (557)
T 3c9f_A 92 IKQ--DYD-LLTIGNHELYL 108 (557)
T ss_dssp TTS--CCS-EECCCGGGSSS
T ss_pred Hhc--CCC-EEeecchhccc
Confidence 221 233 46889999974
No 42
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.20 E-value=0.0026 Score=53.36 Aligned_cols=92 Identities=16% Similarity=0.108 Sum_probs=56.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCC-CccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGD-RTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
|.+|..+++... +.++++|+|....+..-..-.|+|...... .+.... .......+
T Consensus 8 P~~P~~~~~~~~-~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----------------------~~~~~~~~ 64 (106)
T 2dju_A 8 PKPPIDLVVTET-TATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVD----------------------GVATTRYS 64 (106)
T ss_dssp CCCCEEEEEEEE-ETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBC----------------------CCCSSEEE
T ss_pred CcCCCCcEEEec-cCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEcc----------------------CCCccEEE
Confidence 456666655332 367999999976321122345666554332 111100 01112457
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
|++|+|++.|.|||......|...||+...++|.+.
T Consensus 65 i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~ 100 (106)
T 2dju_A 65 IGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQ 100 (106)
T ss_dssp EESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCS
T ss_pred EeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCC
Confidence 899999999999999765556667888889998764
No 43
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=97.20 E-value=0.014 Score=54.13 Aligned_cols=120 Identities=20% Similarity=0.162 Sum_probs=64.3
Q ss_pred EEEEeeccc--ceEEEEEeC---CCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee
Q 007233 130 KLMLINQRS--DFSVALFSG---GLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR 204 (612)
Q Consensus 130 ~~~l~n~r~--~~~f~~f~~---~~~~~~~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~ 204 (612)
++.|-+++. .|.|.+... +.+.|..+... ..|.+|..+++. ..+.++++|+|....+ ....-.|+|..
T Consensus 59 ~~~i~~L~p~t~Y~~~V~a~~~~~~s~~~~~~~~-----t~p~~P~~l~~~-~~~~~sv~l~W~~p~~-~i~~Y~v~~~~ 131 (186)
T 1qr4_A 59 SFILRGLDAGTEYTISLVAEKGRHKSKPTTIKGS-----TVVGSPKGISFS-DITENSATVSWTPPRS-RVDSYRVSYVP 131 (186)
T ss_dssp EEEEESCCSSCEEEEEEEEESSSCBCCCEEEEEE-----CCCCCCSCEEEE-SCCSSCEEEEECCCSS-CCSEEEEEEEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCccCCCEEEEEE-----CCCCCCCccEEE-EeCCCEEEEEEECCCC-cccEEEEEEEe
Confidence 344445554 577777662 23334332222 236677766654 2346899999986532 12334566765
Q ss_pred cCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcCCC
Q 007233 205 KGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS--EYQFKASPY 280 (612)
Q Consensus 205 ~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~--~~~F~T~p~ 280 (612)
.++... ...+.. +.....+|+||+||+.|.++|...... +.|+ ...|+|.|.
T Consensus 132 ~~~~~~----~~~~~~-----------------~~~~~~~i~~L~p~t~Y~~~V~A~~~~---g~s~p~~~~~~T~pd 185 (186)
T 1qr4_A 132 ITGGTP----NVVTVD-----------------GSKTRTKLVKLVPGVDYNVNIISVKGF---EESEPISGILKTALD 185 (186)
T ss_dssp TTCCCC----EEEEEE-----------------TTCCEEEECSCCSSCEEEEEEEEEETT---EECCCEEEEEEC---
T ss_pred CCCCCc----eEEEcC-----------------CCcCEEEEcCCCCCCEEEEEEEEEcCC---CcCcCEEEEEEecCC
Confidence 433111 011111 122456799999999999999874222 2233 456777763
No 44
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=97.20 E-value=0.008 Score=57.18 Aligned_cols=93 Identities=13% Similarity=0.141 Sum_probs=58.3
Q ss_pred CCCCCcceeeecCC---CCCcEEEEEEeCCCCCC------CccEEEEeecCCCCccccCcceEEecCCcCCCCccceecc
Q 007233 165 NPNAPVYPRLAQGK---TWNEMTVTWTSGYGINE------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWR 235 (612)
Q Consensus 165 ~~~~p~~~~La~~~---~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~ 235 (612)
-|.+|..+.+.... ..+++.|+|........ -.-.|+|...++..+.. ...
T Consensus 102 ~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~~~-----~~~--------------- 161 (210)
T 3n06_B 102 QPDPPLELAVEVKQPEDRKPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEWEI-----HFA--------------- 161 (210)
T ss_dssp CCCCCEEEEEEEECCSSSCCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSCEE-----EEE---------------
T ss_pred ecCCCceEEEEEecCcCCCceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCCEE-----Eec---------------
Confidence 46678777776543 46899999987643210 12345555443322211 000
Q ss_pred CCCeEEEEEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcCC
Q 007233 236 DPGYIHTSFLKELWPNAMYTYKVGHRLFNST-YIWSSEYQFKASP 279 (612)
Q Consensus 236 ~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T~p 279 (612)
+-.....|.+|+|++.|..||......|. ..||+...|+|+.
T Consensus 162 --~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~~~~Tp~ 204 (210)
T 3n06_B 162 --GQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPATFIQIPS 204 (210)
T ss_dssp --ETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCEEEECCT
T ss_pred --cCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCceeEECcC
Confidence 11235678999999999999987654454 5688899999954
No 45
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.18 E-value=0.00097 Score=56.72 Aligned_cols=97 Identities=15% Similarity=0.187 Sum_probs=58.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++.. .+.++++|.|......+. ..-.|+|...+..... ..... +-...
T Consensus 10 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~ 67 (111)
T 1x5l_A 10 APSQVVVIRQER-AGQTSVSLLWQEPEQPNGIILEYEIKYYEKDKEMQS----YSTLK-----------------AVTTR 67 (111)
T ss_dssp CCCCCCCEECSC-BCSSCEEEEECCCSCCCSCCCEEEEEEEESSSCCSS----CEEEE-----------------ESSSE
T ss_pred CCCCCceEEEEE-cCCCEEEEEECCCCCCCCEEEEEEEEEEECCCCcee----EEEec-----------------CCCCE
Confidence 344555555432 347899999987532111 1234566544321110 00110 11235
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~ 283 (612)
.+|++|+|++.|.+||......|...||+...|+|++.++.
T Consensus 68 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~p 108 (111)
T 1x5l_A 68 ATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPSGP 108 (111)
T ss_dssp EEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTTSC
T ss_pred EEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCCCC
Confidence 68999999999999998765556667899999999886543
No 46
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=97.13 E-value=0.0049 Score=52.83 Aligned_cols=42 Identities=14% Similarity=0.070 Sum_probs=35.0
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 282 (612)
..++|++|+|+|.|.+||......|...+|+...|+|.+.+.
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred eEEEcCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 457899999999999999876556767789999999987544
No 47
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=97.12 E-value=0.018 Score=54.42 Aligned_cols=135 Identities=9% Similarity=0.059 Sum_probs=73.0
Q ss_pred ccceEEEEEEeeccc--ceEEEEEeC---CCC---CcEE-EEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCC-
Q 007233 124 TGKGSLKLMLINQRS--DFSVALFSG---GLL---KPKL-VAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGI- 193 (612)
Q Consensus 124 ~g~~~~~~~l~n~r~--~~~f~~f~~---~~~---~~~~-~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~- 193 (612)
.+.....+.+-+.+. .|.|++... |.. .+.. +.......-..+.+|..+++. ..+.+++.|+|......
T Consensus 65 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~-~~~~~sv~l~W~~p~~~~ 143 (214)
T 2ibg_A 65 ELGKSFTASVTDLKPQHTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIE-EYSETAVVLHWSLASDAD 143 (214)
T ss_dssp SSEEEEEEEECSCCTTCEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCB-CCSSSCEEEEEECCTTCC
T ss_pred ccCcceeEEecCCcCCCEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEE-EccCCeEEEEEeCCCccC
Confidence 345666777777775 588887664 221 1110 100100001122334443332 22468999999986310
Q ss_pred --CCCccEEEEeecCC-CCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCcccc
Q 007233 194 --NEAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWS 270 (612)
Q Consensus 194 --~~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S 270 (612)
.-..-.|+|...+. ..+. ..+.. .......+|+||+|++.|.|||......|...+|
T Consensus 144 ~~~i~~Y~v~~~~~~~~~~~~----~~~~~----------------~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S 203 (214)
T 2ibg_A 144 EHLITGYYAYYRPSSSAGEYF----KATIE----------------GAHARSFKIAPLETATMYEFKLQSFSAASASEFS 203 (214)
T ss_dssp GGGCCEEEEEEEETTCCSCCE----EEEEE----------------CTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCC
T ss_pred CCCcceEEEEEEECCCCcceE----Eeecc----------------CCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCc
Confidence 01123466654433 1111 01111 1112345789999999999999977656767788
Q ss_pred ceEEEEcCC
Q 007233 271 SEYQFKASP 279 (612)
Q Consensus 271 ~~~~F~T~p 279 (612)
+...++|..
T Consensus 204 ~~~~~~T~~ 212 (214)
T 2ibg_A 204 ALKQGRTQR 212 (214)
T ss_dssp CCEEEECCC
T ss_pred ceEeeEecC
Confidence 899999864
No 48
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.11 E-value=0.0023 Score=56.26 Aligned_cols=93 Identities=17% Similarity=0.149 Sum_probs=57.5
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC------CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
|.+|..+++.- .+.+++.|+|......+. ..-.|+|...+..... .. ... ..
T Consensus 19 p~~P~~l~~~~-~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~~~--~~--~~~-----------------~~ 76 (123)
T 2edd_A 19 MLPPVGVQAVA-LTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSASAK--YK--SED-----------------TT 76 (123)
T ss_dssp SCCCEEEEEEE-EETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTTCC--CC--CEE-----------------ES
T ss_pred CCCCcceEEEE-cCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCCcc--EE--EEe-----------------CC
Confidence 45666666432 246899999986532110 0345777764321100 00 000 01
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.++|......|...||....|+|.+.
T Consensus 77 ~~~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~ 117 (123)
T 2edd_A 77 SLSYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEA 117 (123)
T ss_dssp SSEEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCS
T ss_pred ceEEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCC
Confidence 23578999999999999998764456678999999999875
No 49
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.08 E-value=0.002 Score=54.98 Aligned_cols=93 Identities=14% Similarity=0.166 Sum_probs=56.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++. ..+.+++.|+|.......-..-.|+|...+..... .... +-....+|
T Consensus 18 P~~P~~l~~~-~~~~~sv~l~W~~p~~~~i~~Y~v~~~~~~~~~~~----~~~~------------------~~~~~~~i 74 (115)
T 1x5z_A 18 PGQPLNFKAE-PESETSILLSWTPPRSDTIANYELVYKDGEHGEEQ----RITI------------------EPGTSYRL 74 (115)
T ss_dssp CCCCEEEEEE-CSSSSEEEEEEECCSCCCCCEEEECBEESSSCCCB----CCEE------------------CSSSEEEE
T ss_pred CCCCccCEee-eCCCCEEEEEEcCCCCCCccEEEEEEEeCCCCCce----EEec------------------CCCcEEEE
Confidence 4455555542 23478999999876431111233444433221110 0000 01135678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 75 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 110 (115)
T 1x5z_A 75 QGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSS 110 (115)
T ss_dssp ECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCC
T ss_pred CCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCC
Confidence 999999999999987655666678999999998653
No 50
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=97.04 E-value=0.002 Score=54.84 Aligned_cols=95 Identities=15% Similarity=0.188 Sum_probs=58.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++......++++|+|....... -..-.|+|...+...+.. .+. +...
T Consensus 8 ~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~-----------------~~~~ 65 (110)
T 2crz_A 8 PPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEKDEPRE-----VYQ-----------------GSEV 65 (110)
T ss_dssp CCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTSCCCEE-----EEE-----------------ESCS
T ss_pred CCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCCCceEE-----EEe-----------------CCcE
Confidence 456677777643345689999996542111 112445555432222211 000 1123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
..++++|+|++.|.|||......|...||+...++|.+.+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~ 105 (110)
T 2crz_A 66 ECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGS 105 (110)
T ss_dssp EEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSC
T ss_pred EEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCC
Confidence 4578999999999999987655566678988999987653
No 51
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=97.00 E-value=0.012 Score=55.73 Aligned_cols=94 Identities=16% Similarity=0.145 Sum_probs=56.2
Q ss_pred CCcceeeecCC-CCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 168 APVYPRLAQGK-TWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 168 ~p~~~~La~~~-~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
+|..+++.... +.++++|+|......+ -..-.|+|...+...... -...+. ++-....+
T Consensus 108 ~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~-----------------~~~~~~~~ 169 (211)
T 3p4l_A 108 PPKDVTVVSKEGKPKTIIVNWQPPSEANGKITGYIIYYSTDVNAEIHD-WVIEPV-----------------VGNRLTHQ 169 (211)
T ss_dssp CCEEEEEEEETTEEEEEEEEEECCTTCCSCCCEEEEEEESCTTSCGGG-SEEEEE-----------------ESSCSEEE
T ss_pred CCcceEEEecCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCc-eEEEEe-----------------cCCeeEEE
Confidence 66667766554 3789999999754211 112345555433221100 000111 12234568
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
|+||+|++.|.++|......|.+.||+...|+|..
T Consensus 170 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~ 204 (211)
T 3p4l_A 170 IQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPK 204 (211)
T ss_dssp ECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC-
T ss_pred EcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCcc
Confidence 89999999999999876555666788888888754
No 52
>4h1s_A 5'-nucleotidase; hydrolase; HET: NAG; 2.20A {Homo sapiens}
Probab=96.99 E-value=0.017 Score=63.83 Aligned_cols=75 Identities=15% Similarity=0.121 Sum_probs=41.6
Q ss_pred eEEEEEeCCEE--EEEEeCCCC-----------CCCCHHHHHHHHHHHhhccCCCCCEEEEEEecccccCCCccccCCCC
Q 007233 407 FWYSTDYGMFR--FCVADTEHD-----------WREGTEQYKFIEHCLASVDRQKQPWLIFLAHRVLGYSSGIFYAVDGS 473 (612)
Q Consensus 407 ~~Ysfd~G~v~--fi~Ldt~~~-----------~~~~~~Q~~WL~~~La~~~r~~~pwvIv~~H~P~~yss~~~~~~~~~ 473 (612)
.|.-++.++++ ||++-+... +...-+..+...+.|++ .+..-+|++.|-.+ .
T Consensus 135 py~I~~~~g~kIgviGltt~~~~~~~~~~~~~~f~d~v~~~~~~v~~Lr~---~g~D~II~LsH~G~--~---------- 199 (530)
T 4h1s_A 135 PYKVLPVGDEVVGIVGYTSKETPFLSNPGTNLVFEDEITALQPEVDKLKT---LNVNKIIALGHSGF--E---------- 199 (530)
T ss_dssp SEEEEEETTEEEEEEEEECTTHHHHSCCCTTEEECCHHHHHHHHHHHHHH---TTCCCEEEEEESCH--H----------
T ss_pred ceEEEEeccEEEeeccccccceeeeccCCCCcccCcHHHHHHHHHhhhhh---cCCCEEEEeccCCc--h----------
Confidence 46678888855 566655321 11112222333334443 34566999999653 0
Q ss_pred CCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007233 474 FAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 504 (612)
Q Consensus 474 ~~~~~~r~~l~~l~~k-~~VdlvlsGH~H~Ye 504 (612)
.+ ..+.++ -+||++|.||.|.+-
T Consensus 200 ------~d--~~la~~v~giD~IlgGHsH~~~ 223 (530)
T 4h1s_A 200 ------MD--KLIAQKVRGVDVVVGGHSNTFL 223 (530)
T ss_dssp ------HH--HHHHHHSTTCCEEECCSSCCCB
T ss_pred ------HH--HHHHhcCCCCCeeccCCcccee
Confidence 00 123333 379999999999753
No 53
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=96.93 E-value=0.00077 Score=65.60 Aligned_cols=64 Identities=17% Similarity=0.286 Sum_probs=42.7
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.|++++||+|.. ...+.++++.. .++|.++++||++.. |... .+.++.+ . ..+++
T Consensus 13 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~~i~~GD~~~~-g~~~--~~~~~~l---~-~~~~~ 70 (221)
T 1g5b_A 13 RNIWVVGDLHGC---------------YTNLMNKLDTIGFDNKKDLLISVGDLVDR-GAEN--VECLELI---T-FPWFR 70 (221)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTCEEEECSCCSSS-SSCH--HHHHGGG---G-STTEE
T ss_pred ceEEEEEcCCCC---------------HHHHHHHHHHccCCCCCCEEEEeCCccCC-CCCh--HHHHHHH---h-cCCEE
Confidence 689999999843 23345555543 368999999999953 3322 1222222 2 35899
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 71 ~v~GNhd~~ 79 (221)
T 1g5b_A 71 AVRGNHEQM 79 (221)
T ss_dssp ECCCHHHHH
T ss_pred EEccCcHHH
Confidence 999999974
No 54
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.92 E-value=0.0059 Score=52.51 Aligned_cols=95 Identities=15% Similarity=0.144 Sum_probs=58.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCC-CCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGY-GIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~-~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.. .+.++++|.|.... ..+ -..-.|+|...+...+. .... ..+-..
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~~g~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~~ 75 (120)
T 1x5f_A 17 LPSAPRDVVASL-VSTRFIKLTWRTPASDPHGDNLTYSVFYTKEGIARER------VENT--------------SHPGEM 75 (120)
T ss_dssp CCCCCEEEEEEE-ECSSCEEEEEECCSSCSSCCSSEEEEEEEETTCCCCE------EEEC--------------SSTTCS
T ss_pred CCCCCCCcEEEe-cCCCEEEEEECCCCCCCCCcEEEEEEEEEECCCCCce------EEEe--------------ccCCcc
Confidence 345565555432 24689999998764 211 11245666654322111 0000 011234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
.++|+||+|+|.|.+||......|...||+...|+|.+.
T Consensus 76 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 114 (120)
T 1x5f_A 76 QVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPE 114 (120)
T ss_dssp EEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCC
Confidence 568999999999999998765556667888999999764
No 55
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=96.92 E-value=0.0014 Score=55.56 Aligned_cols=39 Identities=18% Similarity=0.158 Sum_probs=32.3
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..++|+||+|+|.|.+||......|...+|+...|+|.|
T Consensus 66 ~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 66 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 356799999999999999876555556788999999987
No 56
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=96.91 E-value=0.0063 Score=51.46 Aligned_cols=91 Identities=20% Similarity=0.258 Sum_probs=57.4
Q ss_pred CCCCcceeeecC-CCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 166 PNAPVYPRLAQG-KTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~p~~~~La~~-~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+++... .+.++++|+|......+. ..-.|+|...+...+... .. . ...
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~------~~---------------~--~~~ 64 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGSKMWASQ------RA---------------A--SNF 64 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTCSCCEEE------EE---------------S--SSE
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCeEEe------cC---------------C--ccE
Confidence 556776665554 357899999997642110 113445544433222110 00 0 125
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
.+|++|+|++.|.+||......|...||+...|+|.+
T Consensus 65 ~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 101 (108)
T 2dm4_A 65 TEIKNLLVNTLYTVRVAAVTSRGIGNWSDSKSITTIK 101 (108)
T ss_dssp EEECSCCSSCEEEEEEEEEESSCEEEECCCEEEECCS
T ss_pred EEeCCCCCCCEEEEEEEEECCCceeCCCCCEEEECCC
Confidence 6899999999999999876556666789999999964
No 57
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.91 E-value=0.0026 Score=53.79 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=57.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCC---ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEA---EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~---~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.. .+.+++.|+|...... .+ .-.|+|...+..... .... .+-..
T Consensus 7 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~-~g~i~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~ 63 (108)
T 2djs_A 7 GPSTVPIMHQVS-ATMRSITLSWPQPEQP-NGIILDYEIRYYEKEHNEFN----SSMA-----------------RSQTN 63 (108)
T ss_dssp CCCCCSCCEEEE-ECSSEEEEECCCCSCC-SSCEEEEEEEEEETTSCSTT----CEEE-----------------EESSS
T ss_pred CCCCCcceEEEe-cCCCEEEEEECCCCCC-CCeEEEEEEEEEECCCCCcc----eeEE-----------------ecCcc
Confidence 345666655532 2468999999876431 11 123444443321110 0000 01124
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
.++|+||+|++.|.+||......|...||+...|+|.+..
T Consensus 64 ~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 64 TARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 5679999999999999987665666678999999998753
No 58
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.90 E-value=0.0023 Score=54.36 Aligned_cols=92 Identities=17% Similarity=0.227 Sum_probs=56.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCC-CccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGD-RTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~-~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
|..|..+++.- .+.++++|+|........ ..-.|+|...+.. .+. ..+. +...
T Consensus 8 P~~P~~p~~~~-~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~~-----------------~~~~ 64 (109)
T 1x5x_A 8 PSMPASPVLTK-AGITWLSLQWSKPSGTPSDEGISYILEMEEETSGYGFK-----PKYD-----------------GEDL 64 (109)
T ss_dssp CCCCCCCEEEE-ECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSSCCCE-----EEEE-----------------ESCS
T ss_pred CcCCCCCEEEE-ccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCCcceE-----EeEe-----------------CCcc
Confidence 45666666432 346899999987643211 1234556543321 111 0111 0123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..++++|+|++.|.|||......|...+|+...++|.+.
T Consensus 65 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 103 (109)
T 1x5x_A 65 AYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPD 103 (109)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCC
Confidence 467899999999999999765556566788888998764
No 59
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.85 E-value=0.0014 Score=54.75 Aligned_cols=38 Identities=24% Similarity=0.191 Sum_probs=31.3
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..+|+||+|++.|.+||......|...||+...|+|.|
T Consensus 65 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 65 RFTLTGLKPDTTYDIKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp CCEECSCCTTCCEEEECCEECSSCBCCCCCCCCCCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEECCCCCCCCCCCEEEEecc
Confidence 34789999999999999876556666788888888876
No 60
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.81 E-value=0.0017 Score=56.16 Aligned_cols=94 Identities=14% Similarity=0.190 Sum_probs=55.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCC-CCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
-|.+|..+.+.-....+++.|+|....... -..-.|+|..... ..+... + .+..
T Consensus 17 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~~~~~~-----~-----------------~~~~ 74 (120)
T 2crm_A 17 KPGIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMI-----Y-----------------SGAT 74 (120)
T ss_dssp CCCCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSSCCCEEE-----E-----------------CSSC
T ss_pred CCCCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCCcCCEEE-----E-----------------eccc
Confidence 345666666652334689999998654310 1123455554332 111100 0 0112
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++++|+|++.|.|||......|...||+...++|.+.
T Consensus 75 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 114 (120)
T 2crm_A 75 REHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAV 114 (120)
T ss_dssp SEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCC
T ss_pred cEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCC
Confidence 3457899999999999998765455556788778888754
No 61
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.79 E-value=0.0016 Score=55.87 Aligned_cols=41 Identities=17% Similarity=0.110 Sum_probs=33.3
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 282 (612)
..+++||+|++.|.|||......|...||+...|+|.+.+.
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 106 (110)
T 2db8_A 66 MCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLVLQTSEGSG 106 (110)
T ss_dssp CEEEECCCSSSCCEEEEEEECSSCBCCCCSCEECCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCcCCCCCCCEEEEcCCCCC
Confidence 35789999999999999876555666788889999987653
No 62
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.77 E-value=0.0026 Score=54.97 Aligned_cols=93 Identities=14% Similarity=0.143 Sum_probs=57.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCC------CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINE------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
|.+|..+++.. .+.+++.|+|........ ..-.|+|....... ....+. .+.
T Consensus 9 p~~P~~l~~~~-~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~-----~~~~~~----------------~~~ 66 (113)
T 1x5j_A 9 MMPPVGVQASI-LSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN-----TKYKNA----------------NAT 66 (113)
T ss_dssp CCCCEEEEEEE-EETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSS-----CCCEEC----------------CBC
T ss_pred CCCCcceEEEE-ecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCC-----eEEEEE----------------ecC
Confidence 34566666533 247899999986532110 02356676521110 001110 112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.++|......|...||....++|.+.
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~~G~g~~S~~v~~~T~~~ 107 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 107 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECSSCBCCCCCCCCEECCCS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecCCccCCCcccEEeeccCC
Confidence 34678999999999999998765556678999999999765
No 63
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=96.76 E-value=0.016 Score=54.94 Aligned_cols=97 Identities=14% Similarity=0.135 Sum_probs=57.4
Q ss_pred CCCCCcceeeecC-CCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQG-KTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~-~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++... .+.+++.|+|....... ...-.|+|...+...+..... .+ ..+...
T Consensus 103 ~p~pP~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~~~~~~~------~~------------~~~~~~ 164 (215)
T 1bqu_A 103 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPP------ED------------TASTRS 164 (215)
T ss_dssp ECCCCEEEEEECC--CCSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCG------GG------------GCSCCS
T ss_pred cCCCCCceEEEEecCCCceEEEEEeCCCCCCcceEEEEEEEccCCCCCceEecc------cc------------ccCccc
Confidence 4667777776543 35789999998753210 012355565543222211000 00 012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTY---IWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~---~~S~~~~F~T~p 279 (612)
..+|++|+|+|.|.+||......|.+ .||+...|+|.+
T Consensus 165 ~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~~~T~~ 205 (215)
T 1bqu_A 165 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 205 (215)
T ss_dssp EEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEEEEECC
T ss_pred eEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcccccccc
Confidence 56799999999999999976544543 366778888865
No 64
>3gve_A YFKN protein; alpha-beta-BETA-alpha sandwich, structural genomics, PSI-2, structure initiative; HET: CIT; 1.25A {Bacillus subtilis subsp}
Probab=96.74 E-value=0.015 Score=60.50 Aligned_cols=49 Identities=27% Similarity=0.156 Sum_probs=27.5
Q ss_pred CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHhcCCeEEEecCcccce
Q 007233 447 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQKYKVDIAIYGHVHNYE 504 (612)
Q Consensus 447 ~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k~~VdlvlsGH~H~Ye 504 (612)
.....+|++.|-.+ ..+.. ....+.. ...|..-+ -+||++|.||.|...
T Consensus 206 ~g~D~II~l~H~G~--~~d~~----~~~~e~~-~~~lA~~v--~giD~IigGHsH~~~ 254 (341)
T 3gve_A 206 EGADVIIALAHTGI--EKQAQ----SSGAENA-VFDLATKT--KGIDAIISGHQHGLF 254 (341)
T ss_dssp TTCSEEEEEECCCC--CSSCC----CTTCSSC-HHHHHHHC--SCCCEEEECSSCCEE
T ss_pred cCCCEEEEEeccCc--ccccc----ccccchh-HHHHHhcC--CCCcEEEECCCCccC
Confidence 34677999999765 22111 0001111 11232222 489999999999853
No 65
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.73 E-value=0.0069 Score=51.44 Aligned_cols=95 Identities=16% Similarity=0.149 Sum_probs=57.7
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++.. .+.+++.|+|......+ -..-.|+|...++..... . ..... .. ..+
T Consensus 8 P~~p~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~--~~~~~---------------~~--~~~ 66 (109)
T 2e7h_A 8 PPAVSDIRVTR-SSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSS-V--RFLKT---------------SE--NRA 66 (109)
T ss_dssp SCCCCCCEEEE-EETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTT-S--EEEEE---------------SS--SEE
T ss_pred CCCCCccEEEe-cCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCce-e--EEEcc---------------CC--CEE
Confidence 44566666532 24689999998764211 012456665543111100 0 01000 11 267
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
+|+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 67 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 104 (109)
T 2e7h_A 67 ELRGLKRGASYLVQVRARSEAGYGPFGQEHHSQTQLDS 104 (109)
T ss_dssp EEESCCTTSCEEEEEEEECSSCBCCCCSCEECCCCCCS
T ss_pred EECCCCCCCeEEEEEEEEeCCccCCCCCCEEEEcCCCC
Confidence 89999999999999998755566678999999998754
No 66
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.68 E-value=0.0088 Score=51.50 Aligned_cols=95 Identities=15% Similarity=0.097 Sum_probs=56.6
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++.. .+.++++|+|.......-..-.|+|...+.... ....... .+....++|+|
T Consensus 21 ~P~~l~~~~-~~~~sv~l~W~~p~~g~i~~Y~v~~~~~~~~~~--~~~~~~~-----------------~~~~~~~~i~~ 80 (119)
T 2ee2_A 21 APTEVGVKV-LSSSEISVHWEHVLEKIVESYQIRYWAAHDKEE--AANRVQV-----------------TSQEYSARLEN 80 (119)
T ss_dssp CCCSCEEEE-EETTEEEEECCCCSCTTCCEEEEEEEESSSCGG--GCEEEEE-----------------ETTCSEEEECS
T ss_pred CCCcEEEEE-ccCCEEEEEecCCCCCccceEEEEEEECCCccc--CcEEEEc-----------------CCCEeEEEECC
Confidence 454555422 236899999987642011234566654332111 0000111 11224678999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007233 248 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 282 (612)
|+|+|.|.+||......|...+|+...|+|.+.+.
T Consensus 81 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ee2_A 81 LLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASG 115 (119)
T ss_dssp CCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCC
T ss_pred CCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCC
Confidence 99999999999876555666789889999986543
No 67
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.66 E-value=0.0059 Score=52.14 Aligned_cols=91 Identities=14% Similarity=0.143 Sum_probs=56.6
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCC--CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGI--NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++.. .+.++++|+|...... .-..-.|+|...+...+. ... ......
T Consensus 18 P~~P~~l~~~~-~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~----~~~-------------------~~~~~~ 73 (116)
T 1x5g_A 18 PGPAPNLRAYA-ASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDKEQ----DVD-------------------VSSHSY 73 (116)
T ss_dssp CCCCSSCEEEE-EETTEEEEECCCCSCCSSCCSEEEEEEEETTCCCCC----CEE-------------------ECSSEE
T ss_pred CcCCCccEEEe-cCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCccE----EEe-------------------cCCceE
Confidence 44566665532 2368999999875321 111345666554332210 000 012356
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+|+||+|+|.|.+||......|...||+...|+|.+.
T Consensus 74 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 110 (116)
T 1x5g_A 74 TINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSD 110 (116)
T ss_dssp EECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCS
T ss_pred EEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCC
Confidence 7899999999999998765556667888889999764
No 68
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.65 E-value=0.0066 Score=51.38 Aligned_cols=40 Identities=18% Similarity=0.119 Sum_probs=33.0
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
..+|+||+|++.|.+||......|...||+...|+|.+.+
T Consensus 62 ~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~ 101 (106)
T 1x4x_A 62 SYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSS 101 (106)
T ss_dssp EEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCC
T ss_pred eEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCC
Confidence 4678999999999999997655566678999999998753
No 69
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=96.57 E-value=0.0027 Score=64.40 Aligned_cols=65 Identities=17% Similarity=0.246 Sum_probs=42.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeEE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYMI 364 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~~ 364 (612)
|++++||+|.. ...+.++++.. .++|.++++||++.. |..+ .+.++.+..+ ..+++.
T Consensus 2 ~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~d~~v~lGD~vdr-G~~s--~~~l~~l~~l--~~~~~~ 61 (280)
T 2dfj_A 2 ATYLIGDVHGC---------------YDELIALLHKVEFTPGKDTLWLTGDLVAR-GPGS--LDVLRYVKSL--GDSVRL 61 (280)
T ss_dssp CEEEECCCCSC---------------HHHHHHHHHHTTCCTTTCEEEECSCCSSS-SSCH--HHHHHHHHHT--GGGEEE
T ss_pred eEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCcCCC-CCcc--HHHHHHHHhC--CCceEE
Confidence 68999999843 23456666654 357999999999954 4322 1233333332 127999
Q ss_pred cCCCCccC
Q 007233 365 ASGNHERD 372 (612)
Q Consensus 365 v~GNHD~~ 372 (612)
+.||||..
T Consensus 62 v~GNHe~~ 69 (280)
T 2dfj_A 62 VLGNHDLH 69 (280)
T ss_dssp CCCHHHHH
T ss_pred EECCCcHH
Confidence 99999964
No 70
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.56 E-value=0.01 Score=51.83 Aligned_cols=96 Identities=8% Similarity=0.013 Sum_probs=58.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++... +.++++|+|......+ -..-.|+|...+..... ..... ..+....
T Consensus 27 ~P~~P~~l~~~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~-----------------~~~~~~~ 86 (130)
T 1wfo_A 27 VPGPPMGILFPEV-RTTSVRLIWQPPAAPNGIILAYQITHRLNTTTANT--ATVEV-----------------LAPSARQ 86 (130)
T ss_dssp CCCCCCCCEEEEE-CSSEEEEECCCCSCCCSCCCEEEEEEEESSCCCSC--CCEEE-----------------ECTTCCE
T ss_pred CCCCCCceEEEec-CCCEEEEEEcCCCCCCCceEEEEEEEEECCCCCce--EEEEE-----------------eCCCceE
Confidence 3456666665432 4689999998754211 01234556543321100 00000 0123456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
.+|++|+|+|.|.+||......|...||+...|+|.+.
T Consensus 87 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 124 (130)
T 1wfo_A 87 YTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKR 124 (130)
T ss_dssp EEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSC
T ss_pred EEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCC
Confidence 78899999999999999775556667888889999764
No 71
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=96.55 E-value=0.005 Score=53.68 Aligned_cols=82 Identities=13% Similarity=0.062 Sum_probs=47.8
Q ss_pred CCCCcEEEEEEeCCCCC-C-CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEE
Q 007233 178 KTWNEMTVTWTSGYGIN-E-AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYT 255 (612)
Q Consensus 178 ~~~~~m~V~W~t~~~~~-~-~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~ 255 (612)
.+.++++|+|..+.+.. + ..-.|+|..++...+... ... ++....++|+||+|++.|.
T Consensus 19 ~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~---~~~-----------------~~~~~~~~l~~L~p~t~Y~ 78 (114)
T 2kbg_A 19 SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLE---KKV-----------------QGNKDHIILEHLQWTMGYE 78 (114)
T ss_dssp CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEE---EEE-----------------ETTTCCEEECCCCTTCCEE
T ss_pred cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEe---EEc-----------------CCCcCEEEEcCCCCCCEEE
Confidence 45799999998754311 1 123677776543322110 000 1112346799999999999
Q ss_pred EEEeeecCCCCccccceEEEEcCCC
Q 007233 256 YKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 256 Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+||.....-|...-| ...|+|.+.
T Consensus 79 frV~A~N~~G~s~pS-~~~~~T~~~ 102 (114)
T 2kbg_A 79 VQITAANRLGYSEPT-VYEFSMPPK 102 (114)
T ss_dssp EEEEEECTTSCEEEE-EEEECCCCC
T ss_pred EEEEEEeCCcCcCCc-CCEEEcCCC
Confidence 999875333432223 357888654
No 72
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.55 E-value=0.01 Score=50.74 Aligned_cols=93 Identities=18% Similarity=0.152 Sum_probs=58.0
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCcc----EEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
-|.+|..+++... +.+++.|+|..... ...+ .|+|...+..... .... .....
T Consensus 17 ~P~~P~~l~~~~~-~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~------~~~~--------------~~~~~ 73 (119)
T 2ed7_A 17 LPSAPRDVVPVLV-SSRFVRLSWRPPAE--AKGNIQTFTVFFSREGDNRER------ALNT--------------TQPGS 73 (119)
T ss_dssp SCCCCSCCEEEEE-CSSCEEEECCCCSC--CSSCEEEEEEEEEESSCCCCE------EEEC--------------CCTTC
T ss_pred CCcCCcceEEEec-CCCEEEEEEeCCCC--CCCcEEEEEEEEEeCCCCcce------eeEe--------------ecCCc
Confidence 4567777665532 46899999987542 1222 3444443322111 0000 01123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...+|++|+|++.|.+||......|...||+...++|.+.
T Consensus 74 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 113 (119)
T 2ed7_A 74 LQLTVGNLKPEAMYTFRVVAYNEWGPGESSQPIKVATQPE 113 (119)
T ss_dssp CEEEECSCCSSSEEEECCEEEESSCBCSCCCCEEEECCCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEcCCccCCCcCCEEEEeCCC
Confidence 4578999999999999998765566667899999999764
No 73
>3jyf_A 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'- nucleotidase bifunctional periplasmic...; APC63187.2; HET: EPE TAM; 2.43A {Klebsiella pneumoniae subsp}
Probab=96.49 E-value=0.11 Score=54.04 Aligned_cols=47 Identities=23% Similarity=0.310 Sum_probs=26.8
Q ss_pred CCCCEEEEEEecccccCCCccccCCCCCCchhhHHHHHHHHHh-cCCeEEEecCcccce
Q 007233 447 QKQPWLIFLAHRVLGYSSGIFYAVDGSFAEPMGRESLQKLWQK-YKVDIAIYGHVHNYE 504 (612)
Q Consensus 447 ~~~pwvIv~~H~P~~yss~~~~~~~~~~~~~~~r~~l~~l~~k-~~VdlvlsGH~H~Ye 504 (612)
.+..-+|++.|-.+ ..+.. ....+.. .. ++.+ -+||++|.||.|...
T Consensus 200 ~g~D~II~l~H~G~--~~d~~----~~~~en~-~~----~~~~v~gID~IlgGHsH~~~ 247 (339)
T 3jyf_A 200 KGADVVVVVAHSGL--SADPY----QAMAENS-VY----YLSQVPGVDAIMFGHAHAVF 247 (339)
T ss_dssp TTCSEEEEEECCCC--CCSCC----CTTCSCC-HH----HHTTSTTCCEEEECSSCSEE
T ss_pred cCCCEEEEEeccCc--ccccc----ccccchh-HH----HHhhCCCCCEEEeCCCcccc
Confidence 45677999999764 22110 0001111 11 1223 489999999999854
No 74
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.46 E-value=0.019 Score=49.20 Aligned_cols=96 Identities=18% Similarity=0.046 Sum_probs=57.7
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCC--C--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGI--N--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~--~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+|..+++. ..+.++++|+|...... + -..-.|+|...+....... ... .-..++-....
T Consensus 18 ~P~~~~~~-~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~-~~~---------------~~~~~~~~~~~ 80 (122)
T 1va9_A 18 PPMDVTLQ-PVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQY-SIV---------------EMKATGDSEVY 80 (122)
T ss_dssp CCEEEEEE-ECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSC-BCC---------------BCCCCSSEEEE
T ss_pred CCcceEEE-eccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcce-EEE---------------EEecCCceeEE
Confidence 45555553 23468999999986430 1 1134566655432211000 000 00113445778
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+|+||+|++.|.+||......|...||+...|+|...
T Consensus 81 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 117 (122)
T 1va9_A 81 TLDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLES 117 (122)
T ss_dssp EEESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSS
T ss_pred EeCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCC
Confidence 8999999999999998765555566888888988764
No 75
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.43 E-value=0.021 Score=47.92 Aligned_cols=91 Identities=8% Similarity=-0.036 Sum_probs=55.8
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++.. .+.++++|+|......+ -..-.|+|...+...+. .... . ...+
T Consensus 8 P~~P~~l~~~~-~~~~si~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~------~~~~---------------~--~~~~ 63 (106)
T 2ed8_A 8 PGPVENLQAVS-TSPTSILITWEPPAYANGPVQGYRLFCTEVSTGKEQ------NIEV---------------D--GLSY 63 (106)
T ss_dssp CCCCEEEEEEC-SSTTEEEEEEECCSSCSSCCCEEEEEEEETTTCCEE------EEEE---------------C--SSCE
T ss_pred CcCCceeEEEe-cCCCEEEEEECCCCCCCCCeeEEEEEEEECCCCceE------EEeC---------------C--ccEE
Confidence 45666666533 24689999998763211 11244556544322211 0000 0 1345
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+|++|+|++.|.+||......|...+|+...|+|...
T Consensus 64 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 100 (106)
T 2ed8_A 64 KLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSD 100 (106)
T ss_dssp EEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCC
T ss_pred EECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCC
Confidence 7899999999999998765556667888889998754
No 76
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=96.41 E-value=0.0033 Score=63.00 Aligned_cols=64 Identities=23% Similarity=0.329 Sum_probs=41.5
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CC-ccEEEEeCcccccCCchhHHHHHHHhhhhhhcCCCeE
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KN-IDIVFHIGDICYANGYISQWDQFTAQIEPIASTVPYM 363 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~-pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s~vP~~ 363 (612)
.|++++||+|.. ...++++++.. .+ .|.++++||++.. |... .+.++.+.. .+++
T Consensus 19 ~~i~visDiHg~---------------~~~l~~~l~~~~~~~~~d~ii~~GD~vd~-g~~~--~~~l~~l~~----~~~~ 76 (262)
T 2qjc_A 19 GRVIIVGDIHGC---------------RAQLEDLLRAVSFKQGSDTLVAVGDLVNK-GPDS--FGVVRLLKR----LGAY 76 (262)
T ss_dssp SCEEEECCCTTC---------------HHHHHHHHHHHTCCTTTSEEEECSCCSSS-SSCH--HHHHHHHHH----HTCE
T ss_pred CeEEEEeCCCCC---------------HHHHHHHHHHHhccCCCCEEEEecCCCCC-CCCH--HHHHHHHHH----CCCE
Confidence 389999999932 23355555543 23 4999999999954 3322 123333322 4899
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 77 ~v~GNHd~~ 85 (262)
T 2qjc_A 77 SVLGNHDAK 85 (262)
T ss_dssp ECCCHHHHH
T ss_pred EEeCcChHH
Confidence 999999974
No 77
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=96.40 E-value=0.057 Score=55.67 Aligned_cols=40 Identities=15% Similarity=0.046 Sum_probs=31.1
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
...+|++|+|++.|.+||......|...+|.. .|+|++.|
T Consensus 349 ~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~~-~~~T~~~P 388 (389)
T 2jll_A 349 DHIILEHLQWTMGYEVQITAANRLGYSEPTVY-EFSMPPKP 388 (389)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC-CCBCCCEEE-EEECCCCC
T ss_pred ceEEeCCcCCCCEEEEEEEEEcCCcCCCceee-EecCCCCC
Confidence 45678999999999999997655565566655 89998865
No 78
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.40 E-value=0.017 Score=49.41 Aligned_cols=91 Identities=19% Similarity=0.257 Sum_probs=55.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee----cCC-CCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR----KGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~----~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
-|.+|..+++.- .+.++++|.|....+ ...+...|-. ... ..+. ..+. ...
T Consensus 17 ~P~~P~~~~~~~-~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~-----~~~~---------------~~~- 72 (118)
T 1x3d_A 17 EPDIPNPPRIAN-RTKNSLTLQWKAPSD--NGSKIQNFVLEWDEGKGNGEFC-----QCYM---------------GSQ- 72 (118)
T ss_dssp CCCCCCCCEEEE-EETTEEEEECCCCCC--CSSCEEEEEEEECTTTSSSCCE-----EEEE---------------ESC-
T ss_pred CCcCCCCcEEec-cCCCEEEEEECCCCC--CCCcceEEEEEEecCCCCCCeE-----Eeec---------------cCC-
Confidence 355666665533 236899999988643 2334444443 221 1110 0000 011
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++++|+|++.|.|||......|...||+...|+|.+.
T Consensus 73 -~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~ 112 (118)
T 1x3d_A 73 -KQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGC 112 (118)
T ss_dssp -SEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCC
T ss_pred -cEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCC
Confidence 3457899999999999998765556667888888998764
No 79
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=96.30 E-value=0.026 Score=48.15 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=28.9
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 282 (612)
..++|+||+|||.|.++|.... ++...-+....++|.|.+.
T Consensus 59 t~~~i~gL~PgT~Y~~~V~A~~-~~~~~~p~~~~~~T~p~p~ 99 (104)
T 2dle_A 59 PRAVIPGLRSSTFYNITVCPVL-GDIEGTPGFLQVHTPPVPS 99 (104)
T ss_dssp SEEECCSCCSSCEEEEEEEEES-SSCCCBCEEEEEECCCCSC
T ss_pred CEEEECCCCCCCEEEEEEEEEE-CCcccCCeeEEEEccCCCC
Confidence 4578999999999999999763 2222223456778877543
No 80
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.28 E-value=0.015 Score=50.27 Aligned_cols=97 Identities=14% Similarity=0.085 Sum_probs=54.2
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecC-CCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 164 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKG-GDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 164 ~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
.-|.+|..+++.. .+.++++|+|....+... ..-.|+|.... ...+..... .. ++..
T Consensus 16 ~~P~~P~~~~~~~-~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~w~~~~~--~~-----------------~~~~ 75 (121)
T 1x4z_A 16 SPPEAPDRPTIST-ASETSVYVTWIPRGNGGFPIQSFRVEYKKLKKVGDWILATS--AI-----------------PPSR 75 (121)
T ss_dssp CCCCCCCCCEEEE-CCSSEEEEECCCCCCTTSCCCEEEEEEEESSSCCCCEEEEE--EE-----------------CTTC
T ss_pred CCCccCCCCEEEE-ccCCEEEEEEECCCCCCCcceEEEEEEEECCCCCceEEeec--cc-----------------CCCc
Confidence 3566777776643 246899999985432110 22456666543 222211000 00 1223
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEY-QFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~-~F~T~p~ 280 (612)
...++++|+|+++|.|||......|...+|..- .++|.+.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~ 116 (121)
T 1x4z_A 76 LSVEITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGS 116 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCSS
T ss_pred CEEEECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCCC
Confidence 456789999999999999876444444455543 3555443
No 81
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=96.27 E-value=0.025 Score=49.12 Aligned_cols=39 Identities=18% Similarity=0.161 Sum_probs=31.5
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
.++|++|+|+|+|.+||......|...||+...|+|.|.
T Consensus 68 ~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~ 106 (122)
T 2e3v_A 68 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 106 (122)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCC
Confidence 567899999999999998765455556788888988764
No 82
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.27 E-value=0.011 Score=50.96 Aligned_cols=89 Identities=15% Similarity=0.069 Sum_probs=55.0
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCC--C--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGI--N--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~--~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+|..+++.. .+.++++|+|...... . -..-.|+|...+..... ... ++.....
T Consensus 31 ~P~~l~~~~-~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~-----~~~-----------------~~~~~~~ 87 (124)
T 2ed9_A 31 PPQNVSLEV-VNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGEM-----ETL-----------------EPNNLWY 87 (124)
T ss_dssp CCBSCCEEE-EETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCCE-----EEE-----------------CSSCSEE
T ss_pred CCeeeEEEE-cCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcce-----EEe-----------------cCCcCEE
Confidence 455555432 2368999999876431 0 11234556544322111 000 1223456
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
+|++|+|++.|.+||......|...||+...|+|+.
T Consensus 88 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 88 LFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp EEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 899999999999999876555666789999999864
No 83
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=96.26 E-value=0.046 Score=51.86 Aligned_cols=132 Identities=14% Similarity=0.111 Sum_probs=73.5
Q ss_pred cceEEEEEEeecc--cceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCC-----CCCcEEEEEEeCCC
Q 007233 125 GKGSLKLMLINQR--SDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGK-----TWNEMTVTWTSGYG 192 (612)
Q Consensus 125 g~~~~~~~l~n~r--~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~p~~~~La~~~-----~~~~m~V~W~t~~~ 192 (612)
|..+..|.+.+.+ ..|.|.+...... -...|.++.| ..|.+|..+.+.... ..+++.|+|.....
T Consensus 64 ~~~~~~~~~~~L~~~~~Y~~~V~A~N~~---G~~~s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~ 140 (215)
T 1cd9_B 64 RQNNCSIPRKNLLLYQYMAIWVQAENML---GSSESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP 140 (215)
T ss_dssp TCCEEEEEGGGCCTTSCEEEEEEEEETT---EEEECCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG
T ss_pred CCcEEEECCcccccceEEEEEEEEECCC---CCccCccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC
Confidence 4455666655543 4778777652111 0112333322 256778776655431 57899999987532
Q ss_pred CCC--CccEEEEe-ecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCc--
Q 007233 193 INE--AEAFVQWG-RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTY-- 267 (612)
Q Consensus 193 ~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~-- 267 (612)
... -.-.|+|. ..+...+.. .... .+......|.+|+|+|+|.+||......|.+
T Consensus 141 ~~~~~l~Y~v~y~~~~~~~~w~~----~~~~----------------~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~w 200 (215)
T 1cd9_B 141 SEYMEQECELRYQPQLKGANWTL----VFHL----------------PSSKDQFELCGLHQAPVYTLQMRCIRSSLPGFW 200 (215)
T ss_dssp GTTSCEEEEEEEEESSTTCCCEE----EEEE----------------ESCEEEEEECCCCSCSCEEEEEEEEESSSCCCC
T ss_pred CCeEEEEEEEEEccCCCCCCcEE----Eecc----------------cCcceEEEEcCCCCCCEEEEEEEeeECCCCCCC
Confidence 100 13456666 333322211 0000 1123567899999999999999876443333
Q ss_pred -cccceEEEEcCC
Q 007233 268 -IWSSEYQFKASP 279 (612)
Q Consensus 268 -~~S~~~~F~T~p 279 (612)
.||+...|+|+.
T Consensus 201 S~wS~~~~~~T~e 213 (215)
T 1cd9_B 201 SPWSPGLQLRPTM 213 (215)
T ss_dssp CCCCCCEEECCCC
T ss_pred cCCCCccceecCC
Confidence 477888898864
No 84
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.22 E-value=0.02 Score=47.96 Aligned_cols=90 Identities=11% Similarity=0.144 Sum_probs=51.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|. +.+... +.+++.|+|......+ -..-.|+|...+...+.. ... ..-....
T Consensus 8 P~~p~-~~v~~~-~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~----~~~-----------------~~~~~~~ 64 (107)
T 2dn7_A 8 PGRPT-MMISTT-AMNTALLQWHPPKELPGELLGYRLQYCRADEARPNT----IDF-----------------GKDDQHF 64 (107)
T ss_dssp CCCCE-EEEEEC-STTEEEEEEECCSSCSSCCCEEEEEEEETTCSSCEE----EEE-----------------ETTCCEE
T ss_pred CCCCc-EeEEec-CCCEEEEEECCCCCCCCceeEEEEEEEECCCCCCEE----EEe-----------------CCCccEE
Confidence 33444 444433 5789999999864211 112456666543322111 111 0122356
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
+|++|+|++.|.+||......|...+|. ..|+|..
T Consensus 65 ~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~ 99 (107)
T 2dn7_A 65 TVTGLHKGTTYIFRLAAKNRAGLGEEFE-KEIRTPE 99 (107)
T ss_dssp EEECCCTTCEEEEEEEEEETTEEEEEEE-EEEECCC
T ss_pred EeCCCCCCCEEEEEEEEEcCCcccCCee-eEEeCCC
Confidence 7899999999999998764444445565 4577754
No 85
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=96.22 E-value=0.0068 Score=53.26 Aligned_cols=40 Identities=13% Similarity=0.252 Sum_probs=33.5
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
.++++||+|+|+|.+||......|...||+...++|.+.+
T Consensus 76 ~~~v~gL~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 76 RHVVEGLEPRTLYKFRLKVTSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp EEEEESCCTTCEEEEEEEEECSSSCEEECCCEEEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCCccEeeEcCCCC
Confidence 3678999999999999998765666778888999998653
No 86
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.19 E-value=0.0089 Score=52.57 Aligned_cols=97 Identities=15% Similarity=0.181 Sum_probs=55.3
Q ss_pred CCCCCc-ceeeecCCCCCcEEEEEEeCCCCCCCcc-EEEEeecCCCCc----cccCcc-eEEecCCcCCCCccceeccCC
Q 007233 165 NPNAPV-YPRLAQGKTWNEMTVTWTSGYGINEAEA-FVQWGRKGGDRT----HSPAGT-LTFDRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 165 ~~~~p~-~~~La~~~~~~~m~V~W~t~~~~~~~~~-~V~yg~~~~~~~----~~~~~~-~t~~~~~mcg~pa~~~g~~~~ 237 (612)
-|.+|. .+++.- .+.++++|.|...... .... .++|........ ...... ..... ..
T Consensus 15 ~P~~P~~~~~~~~-~~~~sv~L~W~~p~~~-g~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~--------------~~ 78 (127)
T 2dmk_A 15 APNPPSIREELCT-ASHDTITVHWISDDEF-SISSYELQYTIFTGQANFISLYNSVDSWMIVPN--------------IK 78 (127)
T ss_dssp SCCCCEEEEEEEE-EETTEEEEEEECSCCS-SEEEEEEEEEEESCCSCHHHHHHTGGGSEEEEE--------------EC
T ss_pred CCcCCCCCCEEEe-eeCCEEEEEECCCCCC-CccceEEEEEEecccccccccccCCCCcEEeec--------------cc
Confidence 466676 555432 2468999999987531 1223 677764111000 000000 00000 01
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+ ...+++||+|+++|.|||......|. .+|+...++|++.
T Consensus 79 ~--~~~~v~gL~p~t~Y~frV~A~N~~G~-~~S~~v~~~T~~~ 118 (127)
T 2dmk_A 79 Q--NHYTVHGLQSGTRYIFIVKAINQAGS-RNSEPTRLKTNSQ 118 (127)
T ss_dssp S--SEEEEESCCSSCEEEEEEEEEESSCE-EECCCEEEECCSS
T ss_pred C--CeEEECCCCCCCEEEEEEEEEeCCCC-CCCcCeEeEeCCC
Confidence 1 23578999999999999987654555 5677888998764
No 87
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=96.18 E-value=0.0091 Score=56.49 Aligned_cols=97 Identities=15% Similarity=0.180 Sum_probs=57.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCC--C-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGI--N-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~--~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+..... +++|+|...... . -..-.|+|...+...+.. ..+... ..+...
T Consensus 8 ~P~~P~~~~~~~~~~--s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~----~~~~~~-------------~~~~~~ 68 (209)
T 2vkw_A 8 TPSSPSIDQVEPYSS--TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHS----KWYDAK-------------EASMEG 68 (209)
T ss_dssp CCCCCEEEEEEECSS--CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEE----EEEEHH-------------HHHHHS
T ss_pred CCcCCcccEeeeccC--eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceE----eEeecc-------------CCCccc
Confidence 456676666654433 699999986321 1 122446666543322211 111000 001223
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..++++|+|++.|.|||......|...+|....|+|.+.
T Consensus 69 ~~~i~~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~T~~~ 107 (209)
T 2vkw_A 69 IVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPV 107 (209)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECCCS
T ss_pred eEEeCCCCCCCeEEEEEEEEcCCcccCCcccccccccCC
Confidence 567899999999999998765455556788888998764
No 88
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=96.18 E-value=0.12 Score=48.69 Aligned_cols=107 Identities=17% Similarity=0.283 Sum_probs=57.7
Q ss_pred EEEEeeccc--ceEEEEEeC---CCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEee
Q 007233 130 KLMLINQRS--DFSVALFSG---GLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGR 204 (612)
Q Consensus 130 ~~~l~n~r~--~~~f~~f~~---~~~~~~~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~ 204 (612)
.+.|-+++. .|.|.+... +.+.|..+... ..+.+|..+++.. .+.++++|+|....+..-..-.|+|..
T Consensus 78 ~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~t~-----~~~p~P~~l~~~~-~~~~sv~l~W~~p~~~~i~~Y~v~~~~ 151 (203)
T 2gee_A 78 YYTVTGLEPGIDYDISVYTVKNGGESTPTTLTQQ-----TAVPPPTDLRFTN-IGPDTMRVTWAPPPSIDLTNFLVRYSP 151 (203)
T ss_dssp EEEECSCCTTCEEEEEEEEESSSCBCCCEEEEEE-----CCCCCCEEEEEEE-EETTEEEEEEECCSSCCCSEEEEEEEE
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccEeeeec-----CCCcCCCceEEEE-cCCCEEEEEEcCCCCCCccEEEEEEEE
Confidence 344445443 567766552 33334333221 2223566665432 236899999998643212345566765
Q ss_pred cCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeec
Q 007233 205 KGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 205 ~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~ 262 (612)
..+... ...... ++-....+|+||+|++.|.++|....
T Consensus 152 ~~~~~~---~~~~~~-----------------~~~~~~~~i~~L~p~t~Y~~~V~A~~ 189 (203)
T 2gee_A 152 VKNEED---VAELSI-----------------SPSDNAVVLTNLLPGTEYVVSVSSVY 189 (203)
T ss_dssp TTCGGG---CEEEEE-----------------CTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCc---cEEEEc-----------------CCCcCEEEECCCCCCCEEEEEEEEec
Confidence 332110 001111 12234568899999999999998753
No 89
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=96.13 E-value=0.03 Score=45.40 Aligned_cols=84 Identities=20% Similarity=0.260 Sum_probs=46.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++... ..+++.|+|....+ ......|....+.. .... ..+ -..++
T Consensus 4 P~~P~~l~~~~~-~~~sv~L~W~~~~~---~~~i~~Y~v~~~~~-------~~~~---------------~~~--~~~~~ 55 (88)
T 1k85_A 4 PTAPTNLASTAQ-TTSSITLSWTASTD---NVGVTGYDVYNGTA-------LATT---------------VTG--TTATI 55 (88)
T ss_dssp CCCCEEEEEEEE-CSSCEEEEEECCSC---CSSEEEEEEEESSS-------EEEE---------------ESS--SEEEE
T ss_pred cCCCCccEEEec-cCCEEEEEECCCCC---CCCccEEEEEECCE-------EEee---------------cCC--CEEEe
Confidence 456665554432 36899999987642 12355555321110 0000 011 13468
Q ss_pred cCCCCCCEEEEEEeeecCCCC-ccccceEEEEc
Q 007233 246 KELWPNAMYTYKVGHRLFNST-YIWSSEYQFKA 277 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T 277 (612)
++|+||+.|+|+|......|. ...|...+|+|
T Consensus 56 ~~L~~~t~Y~~~V~A~n~~G~~s~~S~~v~v~T 88 (88)
T 1k85_A 56 SGLAADTSYTFTVKAKDAAGNVSAASNAVSVKT 88 (88)
T ss_dssp CCCCSSCEEEEEEEEEETTTEECCCCCCEEEEC
T ss_pred CCCCCCCEEEEEEEEEeCCCCcCCCCCCEEEEC
Confidence 999999999999987643443 22345555544
No 90
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=96.12 E-value=0.026 Score=47.62 Aligned_cols=93 Identities=14% Similarity=0.091 Sum_probs=51.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++.- .+.+++.|+|..... .-..-.|+|........ ...... ++-...++|
T Consensus 3 p~~P~~l~v~~-~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~~~~~l 60 (104)
T 2rb8_A 3 LDAPSQIEVKD-VTDTTALITWMPPSQ-PVDGFELTYGIKDVPGD---RTTIDL-----------------TEDENQYSI 60 (104)
T ss_dssp CCCCEEEEEES-CCSSCEEEEEECCSS-CCSEEEEEEEETTCTTC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEEEE-ecCCeEEEEEcCCCC-ccceEEEEEEECcCCCc---eEEEEc-----------------CCCcCEEEe
Confidence 45677666543 346899999987532 11234566765321110 000111 112235689
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
+||+|||+|.++|......|... .....|+|.+..
T Consensus 61 ~~L~p~t~Y~~~V~A~~~~g~s~-p~~~~~~T~~~~ 95 (104)
T 2rb8_A 61 GNLKPDTEYEVSLISRRGDMSSN-PAKETFTTGLAA 95 (104)
T ss_dssp CSCCTTCEEEEEEEEEETTEECC-CEEEEEECCC--
T ss_pred CCCCCCCEEEEEEEEEeCCccCC-CEEEEEECCCCc
Confidence 99999999999998753333221 224568887653
No 91
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=96.10 E-value=0.038 Score=52.14 Aligned_cols=92 Identities=15% Similarity=0.170 Sum_probs=54.4
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCC------CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYG------INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~------~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
.+|..+++.. .+.++++|+|..... .....-.|+|...+..... ..+. .+..
T Consensus 6 ~~P~~l~~~~-~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~ 63 (211)
T 3p4l_A 6 MPPVGVQASI-LSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTK----YKNA-----------------NATT 63 (211)
T ss_dssp CCCEEEEEEE-CSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CC----CEEE-----------------EESS
T ss_pred CCCCCEEEEe-cCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcce----EEEe-----------------CCCc
Confidence 3566665432 346899999997421 1112345666654332110 0000 0123
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...+|++|+|++.|.++|......|...||....|+|.+.
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~ 103 (211)
T 3p4l_A 64 LSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFEL 103 (211)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCC
T ss_pred eEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccC
Confidence 4567999999999999998764455556788889998753
No 92
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=96.10 E-value=0.0068 Score=63.19 Aligned_cols=68 Identities=18% Similarity=0.204 Sum_probs=43.2
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC----------CccEEEEeCcccccCCchhHHHHHHHhhhhh
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK----------NIDIVFHIGDICYANGYISQWDQFTAQIEPI 356 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l 356 (612)
.+++++||+|.. ...+.++++... ++|.++++||++..+.... +.+..+..+
T Consensus 71 ~~i~vigDiHG~---------------~~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG~~s~---evl~~l~~l 132 (342)
T 2z72_A 71 KKVVALSDVHGQ---------------YDVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRGHQVN---EVLWFMYQL 132 (342)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSSSCHH---HHHHHHHHH
T ss_pred CCEEEEECCCCC---------------HHHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCCCCHH---HHHHHHHHH
Confidence 689999999843 234556665422 4799999999995433221 222222222
Q ss_pred -----hcCCCeEEcCCCCccC
Q 007233 357 -----ASTVPYMIASGNHERD 372 (612)
Q Consensus 357 -----~s~vP~~~v~GNHD~~ 372 (612)
....+++.+.||||..
T Consensus 133 ~~~~~~~~~~v~~v~GNHE~~ 153 (342)
T 2z72_A 133 DQQARDAGGMVHLLMGNHEQM 153 (342)
T ss_dssp HHHHHHTTCEEEECCCHHHHH
T ss_pred HHHHhhCCCeEEEEecCCcHH
Confidence 2235699999999973
No 93
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=96.07 E-value=0.11 Score=51.43 Aligned_cols=102 Identities=17% Similarity=0.089 Sum_probs=56.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.+.+|..+++. ..+.++++|+|....+ ....-.|+|...++.... .... .+.....+
T Consensus 112 ~~~~P~~l~~~-~~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~----~~~~-----------------~~~~~~~~ 168 (290)
T 3r8q_A 112 NVSPPRRARVT-DATETTITISWRTKTE-TITGFQVDAVPANGQTPI----QRTI-----------------KPDVRSYT 168 (290)
T ss_dssp CCCCCEEEEEE-EECSSCEEEEEECCSC-CCCEEEEEEEESSSCCCE----EEEE-----------------CTTCSEEE
T ss_pred CCCCCceeEEE-EcCCCeEEEEEeCCCC-cccEEEEEEEECCCCcce----EEec-----------------CCCccEEE
Confidence 34567666654 2346899999998632 123355666554322110 0111 11223467
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcCCCCCCCCCeEEEEEee
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSS--EYQFKASPYPGQNSLQRVVIFGD 294 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~--~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
|+||+|++.|.++|......| .|. ...++|.|.+ ...+++...++
T Consensus 169 i~~L~p~t~Y~~~V~A~n~~g---~s~~~~~~~~t~p~~--P~~l~~~~~~~ 215 (290)
T 3r8q_A 169 ITGLQPGTDYKIYLYTLNDNA---RSSPVVIDASTAIDA--PSNLRFLATTP 215 (290)
T ss_dssp ECSCCTTCEEEEEEEEEETTE---ECCCEEEEEECCCCC--CEEEEEEEEET
T ss_pred ECCCCCCCEEEEEEEEEeCCc---ccCCEEEEecCCCCC--CCccEEEeeCC
Confidence 899999999999998653222 233 3445665532 22355544443
No 94
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.05 E-value=0.022 Score=49.72 Aligned_cols=41 Identities=15% Similarity=-0.196 Sum_probs=33.0
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.+||......|...||....|+|.+.
T Consensus 78 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 118 (134)
T 2edx_A 78 HSSWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDED 118 (134)
T ss_dssp CSEEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCC
T ss_pred ccEEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCC
Confidence 35678999999999999998765556567888888998754
No 95
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.04 E-value=0.018 Score=50.30 Aligned_cols=42 Identities=12% Similarity=0.030 Sum_probs=34.0
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
.....+|+||+|++.|.+||......|...||+...|+|.+.
T Consensus 75 ~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 75 TQLSQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp TCCEEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred CccEEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 345678999999999999998765556667898899999763
No 96
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.01 E-value=0.019 Score=48.57 Aligned_cols=84 Identities=13% Similarity=0.013 Sum_probs=45.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCcc----EEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
|.+|..+++. ..+.++++|+|...... ...+ .|+|...+...+..... .+....
T Consensus 8 P~~P~~l~~~-~~~~~sv~l~W~~p~~~-g~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 65 (110)
T 2yuw_A 8 TSPPTLLTVD-SVTDTTVTMRWRPPDHI-GAAGLDGYVLEYCFEGTEDWIVANK--------------------DLIDKT 65 (110)
T ss_dssp SCCCEEEEEE-EECSSCEEEEEECCSSC-CSSCEEEEEEEEEETTCSSEEECCS--------------------SCCCSS
T ss_pred CCCCCccEEE-eccCCeEEEEECCCCCC-CCCCccEEEEEEEECCCccceEecc--------------------ccCccC
Confidence 4456555543 22468999999875421 1223 34554433322211100 011223
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
..++++|+|++.|.|||......|...+|+
T Consensus 66 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 95 (110)
T 2yuw_A 66 KFTITGLPTDAKIFVRVKAVNAAGASEPKY 95 (110)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEECCCEE
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCcC
Confidence 467899999999999998764334334444
No 97
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=96.01 E-value=0.025 Score=48.69 Aligned_cols=92 Identities=13% Similarity=-0.013 Sum_probs=53.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCC--C-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGI--N-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~--~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
|.+|..+.+.- .+.++++|+|...... . -..-.|+|...++..+...... ....-.
T Consensus 11 p~~P~~P~v~~-v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~~~w~~~~~~--------------------~~~~~~ 69 (112)
T 1bpv_A 11 IDPPGKPVPLN-ITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPNGRWLKANFS--------------------NILENE 69 (112)
T ss_dssp CCCCCCCEEEE-EETTEEEEECCCCSCCTTCCCSCCEEEEEETTSCCCEECCCS--------------------CCCSSE
T ss_pred CCCCCCCEEEE-eeCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEeecc--------------------cCccCE
Confidence 45667766642 2468999999843211 1 1235677776544333211100 011123
Q ss_pred EEecCCCCCCEEEEEEeeecCCCC-ccccceEEEEcC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNST-YIWSSEYQFKAS 278 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~-~~~S~~~~F~T~ 278 (612)
.+++||+||+.|.|||......|. ..+|+.-...|.
T Consensus 70 ~~v~~L~p~t~Y~frV~A~N~~G~~s~~S~~~~~~t~ 106 (112)
T 1bpv_A 70 FTVSGLTEDAAYEFRVIAKNAAGAISPPSEPSDAITC 106 (112)
T ss_dssp EEECSCCSSCCEEEEEEEECTTSCEEEEEEEEEEECS
T ss_pred EEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEEe
Confidence 578999999999999997654454 445655555543
No 98
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=95.95 E-value=0.11 Score=49.92 Aligned_cols=100 Identities=14% Similarity=0.058 Sum_probs=55.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++.. .+.++++|+|......+ -..-.|+|....+..... ....... ........
T Consensus 98 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~-~~~~~~~--------------~~~~~~~~ 161 (234)
T 3f7q_A 98 VPSEPGRLAFNV-VSSTVTQLSWAEPAETNGEITAYEVCYGLVNDDNRPI-GPMKKVL--------------VDNPKNRM 161 (234)
T ss_dssp CCCCCCCCEEEE-CSSSCEEEECCCCSCCSSCCCEEEEEEEEBCTTSCBS-SCCEECC--------------CSCTTCCE
T ss_pred CCCCCCccEEEE-ecCCEEEEEEcCCCCCCCceeEEEEEEEECCCCCCcc-CcceEEE--------------ecCCcceE
Confidence 355666666543 34689999998653211 112355666543322110 0000000 00112345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcCCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSS-EYQFKASPY 280 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~-~~~F~T~p~ 280 (612)
.+|+||+|++.|.++|......|...+|+ ...|+|.+.
T Consensus 162 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~ 200 (234)
T 3f7q_A 162 LLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPK 200 (234)
T ss_dssp EEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCC
T ss_pred EEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCC
Confidence 68999999999999998765445555665 467888764
No 99
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.94 E-value=0.016 Score=49.63 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=27.9
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccc-eEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSS-EYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~-~~~F~T~p 279 (612)
..++|++|+|++.|.+||......|...||+ ..+++|.+
T Consensus 73 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~ 112 (118)
T 2yrz_A 73 TSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV 112 (118)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred CEEEeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence 4567899999999999998765555556666 34444443
No 100
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=95.94 E-value=0.096 Score=51.78 Aligned_cols=38 Identities=13% Similarity=0.141 Sum_probs=30.9
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
...+|+||+||+.|.++|......| ..+|+...|+|++
T Consensus 253 ~~~~~~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~~ 290 (290)
T 3l5i_A 253 TEYTLSSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTPK 290 (290)
T ss_dssp SEEEECSCCTTCEEEEEEEEEETTE-EEECCCEEEECCC
T ss_pred eEEEeCCCCCCCEEEEEEEEEeCCC-CCCCCceEeecCC
Confidence 3567999999999999998765445 4678999999975
No 101
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=95.93 E-value=0.046 Score=55.24 Aligned_cols=132 Identities=11% Similarity=0.115 Sum_probs=74.0
Q ss_pred cceEEEEEE--eecccceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCC-----CCCcEEEEEEeCCC
Q 007233 125 GKGSLKLML--INQRSDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGK-----TWNEMTVTWTSGYG 192 (612)
Q Consensus 125 g~~~~~~~l--~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~p~~~~La~~~-----~~~~m~V~W~t~~~ 192 (612)
|..+.+|.. +..-..|.|++..-... -...|.++.| .-|.+|..+++.... ..+++.|+|.....
T Consensus 158 ~~~~~~~~~~~L~~~~~Y~f~V~A~N~~---G~~~s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~~ 234 (313)
T 2d9q_B 158 GQSHCSIPRKHLLLYQNMGIWVQAENAL---GTSMSPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQP 234 (313)
T ss_dssp TCSEEEEEGGGCCSSSCEEEEEEEEETT---EEEECCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCGG
T ss_pred CCcEEEECccccccceeEEEEEEEECCC---CCccCccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCCC
Confidence 445666654 23335788887653111 1112333322 246677666654432 46899999987532
Q ss_pred CCC--CccEEEEe-ecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCc--
Q 007233 193 INE--AEAFVQWG-RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTY-- 267 (612)
Q Consensus 193 ~~~--~~~~V~yg-~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~-- 267 (612)
... -.-.|+|. ..+...+... .. ..+..+...|++|+|+|+|..||......|.+
T Consensus 235 ~~~~~l~Y~v~y~~~~~~~~w~~~----~~----------------~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~w 294 (313)
T 2d9q_B 235 GLHINQKCELRHKPQRGEASWALV----GP----------------LPLEALQYELCGLLPATAYTLQIRCIRWPLPGHW 294 (313)
T ss_dssp GTTSCEEEEEEEEESSSCCCCEEE----EE----------------ECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCC
T ss_pred CCceeEEEEEEEccCCCCCCcEEc----cc----------------ccCcceEEEEeCCCCCCeEEEEEEeeECCCCCcc
Confidence 111 13456666 3333333211 00 01234677899999999999999976433444
Q ss_pred -cccceEEEEcCC
Q 007233 268 -IWSSEYQFKASP 279 (612)
Q Consensus 268 -~~S~~~~F~T~p 279 (612)
.||+...|+|+.
T Consensus 295 S~wS~~~~~~T~~ 307 (313)
T 2d9q_B 295 SDWSPSLELRTTE 307 (313)
T ss_dssp CCCCCCEEECCCC
T ss_pred CCCCCccceeCCc
Confidence 367778888875
No 102
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=95.85 E-value=0.013 Score=49.81 Aligned_cols=41 Identities=24% Similarity=0.360 Sum_probs=35.2
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~ 283 (612)
++|+||+|+|.|.+||......|...||+...|+|.+.++.
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~~gp 104 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPPSGP 104 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCCSCC
T ss_pred EEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCCCCC
Confidence 78999999999999999876566677999999999887654
No 103
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.84 E-value=0.044 Score=46.10 Aligned_cols=92 Identities=14% Similarity=0.073 Sum_probs=51.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.+.+|..+++.-- +.++++|+|..... ...-.|+|.......+.. ..... -++. .++
T Consensus 8 ~~~~P~~l~~~~~-~~~sv~lsW~~p~~--~~~Y~v~y~~~~~~~~~~-~~~~~-----------------~~~~--~~~ 64 (104)
T 2dkm_A 8 PLPPPRALTLAAV-TPRTVHLTWQPSAG--ATHYLVRCSPASPKGEEE-EREVQ-----------------VGRP--EVL 64 (104)
T ss_dssp SCCCCCCCEEEEE-CSSEEEEECCCCSS--CSEEEEEEEESSSCCSSC-CEEEE-----------------ESSS--EEE
T ss_pred CCCCCceeEEEec-CCCEEEEEEeCCCC--CCeEEEEEEECCCCCCcc-eEEEe-----------------cCCC--EEE
Confidence 3456777766432 35899999976543 233456666543211100 00000 0122 788
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
|+||+|+|+|.++|......+... .....++|.|.
T Consensus 65 l~~L~p~t~Y~~~V~A~~~~~~s~-p~~~~~~T~p~ 99 (104)
T 2dkm_A 65 LDGLEPGRDYEVSVQSLRGPEGSE-ARGIRARTPTS 99 (104)
T ss_dssp EESCCTTCCEEEEEEEECSSSBCC-CEEEECCCCCC
T ss_pred ECCCCCCCEEEEEEEEECCCCCCC-CEEEEEEcCCC
Confidence 999999999999998753222211 12345667654
No 104
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.84 E-value=0.023 Score=49.40 Aligned_cols=40 Identities=10% Similarity=-0.043 Sum_probs=33.4
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...+|++|+|++.|.+||......|...||+...|+|++.
T Consensus 79 ~~~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 79 SRARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp SCEEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred ceEEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 3567899999999999998765556677899999999875
No 105
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=95.82 E-value=0.25 Score=48.84 Aligned_cols=76 Identities=18% Similarity=0.211 Sum_probs=45.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.. .+.+++.|+|....+ ....-.|+|...++....... ...+-....+
T Consensus 201 ~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~~~~Y~v~~~~~~~~~~~~~~--------------------~~~~~~~~~~ 258 (290)
T 3r8q_A 201 AIDAPSNLRFLA-TTPNSLLVSWQPPRA-RITGYIIKYEKPGSPPREVVP--------------------RPRPGVTEAT 258 (290)
T ss_dssp CCCCCEEEEEEE-EETTEEEEEEECCSS-CCCEEEEEEECTTSCCEECSS--------------------CCCTTCCEEE
T ss_pred CCCCCCccEEEe-eCCCEEEEEEeCCCC-cccEEEEEEEeCCCCcceeEe--------------------ccCCCccEEE
Confidence 366777666542 246899999987643 123456666654332211000 0012234567
Q ss_pred ecCCCCCCEEEEEEeeec
Q 007233 245 LKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~ 262 (612)
++||+||+.|.|+|....
T Consensus 259 i~~L~p~t~Y~~~V~A~~ 276 (290)
T 3r8q_A 259 ITGLEPGTEYTIYVIALK 276 (290)
T ss_dssp ECSCCTTCEEEEEEEEEE
T ss_pred ECCCCCCCEEEEEEEEEe
Confidence 999999999999998753
No 106
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=95.82 E-value=0.33 Score=47.62 Aligned_cols=105 Identities=15% Similarity=0.199 Sum_probs=58.0
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.. .+.++++|+|....+ ....-.|+|....+.... ...... +.+-....+
T Consensus 104 ~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~--------------~~~~~~~~~ 163 (283)
T 1tdq_A 104 EIDAPKNLRVGS-RTATSLDLEWDNSEA-EAQEYKVVYSTLAGEQYH----EVLVPK--------------GIGPTTKTT 163 (283)
T ss_dssp CCCCCEEEEEEE-ECSSCEEEEEECCSS-CCSEEEEEEEETTCCCCE----EEEEEC--------------CSSSEEEEE
T ss_pred CCCCCCceEEEe-cCCCeEEEEecCCCC-CccEEEEEEEeCCCCcce----EEECCC--------------CCcccceEE
Confidence 456776666533 246899999997642 123456667654332210 111110 011256778
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccce--EEEEcCCCCCCCCCeEEEEEee
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSE--YQFKASPYPGQNSLQRVVIFGD 294 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~--~~F~T~p~~g~~~~~rf~v~GD 294 (612)
+++|+|++.|.++|......| .|.. ..+.|.|.+ ...+++...++
T Consensus 164 i~~L~p~t~Y~~~V~A~n~~g---~s~~~~~~~~t~~~~--P~~l~~~~~~~ 210 (283)
T 1tdq_A 164 LTDLVPGTEYGVGISAVMNSK---QSIPATMNARTELDS--PRDLMVTASSE 210 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTE---ECCCEEEEEECCCCC--CEEEEEEEECS
T ss_pred EecCCCCCEEEEEEEEEeCCC---CCcceEEEecCCCCC--CCccEEeEecC
Confidence 999999999999998763322 3443 345554432 22355544443
No 107
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.82 E-value=0.037 Score=47.25 Aligned_cols=40 Identities=20% Similarity=0.067 Sum_probs=33.0
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..++|++|+|+|.|.+||......|...||+...|+|.+.
T Consensus 76 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 115 (121)
T 2dlh_A 76 QITTIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTG 115 (121)
T ss_dssp SEECCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred eEEEecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCC
Confidence 4568999999999999998765556667898899999764
No 108
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=95.78 E-value=0.03 Score=61.83 Aligned_cols=129 Identities=13% Similarity=0.124 Sum_probs=70.8
Q ss_pred EEEEEEeeccc--ceEEEEEeCCCC---CcEEEEeeccccc-cCCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccE
Q 007233 128 SLKLMLINQRS--DFSVALFSGGLL---KPKLVAVSNKIAF-TNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAF 199 (612)
Q Consensus 128 ~~~~~l~n~r~--~~~f~~f~~~~~---~~~~~a~s~~~~~-~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~ 199 (612)
..++.|-+.+. .|.|.+....-. .| -..|..+.+ ..+.+|..+.+ ...+.++++|+|......+ -..-.
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sp--s~~s~~v~v~T~~~~Ps~~~~-~~~s~tSV~LsW~pP~~~ng~I~~Y~ 475 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVT--SRSFRTASVSINQTEPPKVRL-EGRSTTSLSVSWSIPPPQQSRVWKYE 475 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCS--CCCEEEEEEECCSCCCCEEEE-EECCC-CCEEEEECCTTTTTTCSEEE
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCC--CCccceeEEeecccCCCCCce-eeccCCeEEEEEECCcCCCCcccEEE
Confidence 34455555554 688887663211 11 001112222 24557777776 4445789999999753211 01235
Q ss_pred EEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 200 VQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 200 V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
|+|...+... ...+.. +....++|+||+|+|.|.+||......|...||+...|+|.+
T Consensus 476 V~y~~~~~~~-----~~~~v~-----------------~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~ 533 (536)
T 3fl7_A 476 VTYRKKGDSN-----SYNVRR-----------------TEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS 533 (536)
T ss_dssp EEEEEC--CC-----CCEEEE-----------------ESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC
T ss_pred EEEEECCCCc-----eEEEEc-----------------CCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCC
Confidence 6666543320 001110 112356799999999999999876556666789999999987
Q ss_pred CC
Q 007233 280 YP 281 (612)
Q Consensus 280 ~~ 281 (612)
..
T Consensus 534 ~~ 535 (536)
T 3fl7_A 534 PE 535 (536)
T ss_dssp --
T ss_pred CC
Confidence 53
No 109
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.77 E-value=0.015 Score=49.53 Aligned_cols=94 Identities=16% Similarity=0.152 Sum_probs=51.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCC-CCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++. ..+.++++|.|....+.. -..-.|+|...+. ..+.... . .....
T Consensus 15 ~P~~P~~~~~~-~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~----------------~~~~~ 72 (117)
T 1uem_A 15 LPGPPSKPQVT-DVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVA-----N----------------HVKTT 72 (117)
T ss_dssp SCBCCCCCEEE-EECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEE-----E----------------EECSS
T ss_pred CccCCCCCEEE-EecCCEEEEEEeCCCCCCcCceEEEEEEEECCCCCceeEcc-----c----------------ccCcC
Confidence 45567666654 234689999998654211 0123455544321 1111000 0 00112
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEE-EEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQ-FKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~-F~T~p~ 280 (612)
..++++|+|++.|.|||......|...||..-. ++|.+.
T Consensus 73 ~~~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~t~~~ 112 (117)
T 1uem_A 73 LYTVRGLRPNTIYLFMVRAINPQGLSDPSPMSDPVRTQDS 112 (117)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTEEEEECCCCCCEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEECCCccCCCcCCCccEEccCC
Confidence 457899999999999998764444445565544 777654
No 110
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=95.73 E-value=0.054 Score=45.53 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=51.7
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCC--C--CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYG--I--NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~--~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+|..+++. .-+.+++.|+|..... . .-..-.|.|...+..... .....+.. +-...+
T Consensus 7 ~P~~~~~~-~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~-~~~~~~v~-----------------~~~~~~ 67 (102)
T 3n1f_C 7 GPHIAYTE-AVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDS-DYKRDVVE-----------------GSKQWH 67 (102)
T ss_dssp CCEEEEEE-ECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGG-GCEEEEEE-----------------TTCSEE
T ss_pred CCceeEEE-EcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCC-ceEEEEEc-----------------CCceEE
Confidence 45444442 2346899999987531 0 011235777765432100 00011111 111245
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 277 (612)
+|++|+|+|.|..+|..-...|.+..|+...++|
T Consensus 68 ~l~~L~p~t~Y~v~V~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 68 MIGHLQPETSYDIKMQCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EECSCCTTCEEEEEEEEEETTEECCCCCCEEEEC
T ss_pred ECCCCCCCCEEEEEEEEECCCcCCCCCCCEEeec
Confidence 8999999999999998654445556677777777
No 111
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.70 E-value=0.029 Score=48.78 Aligned_cols=98 Identities=12% Similarity=0.096 Sum_probs=54.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeec---CCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRK---GGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~---~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
-|.+|..+++.- ...++++|.|....+.. -..-.|+|... ....+.... ... ..+.
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~---~~~---------------~~~~ 77 (124)
T 1wis_A 17 LPGPPTNLGISN-IGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIH---QLS---------------NEPD 77 (124)
T ss_dssp CCCCCEEEEEES-CCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEE---EEE---------------SCTT
T ss_pred CCccCCCCEEEE-ecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEee---eEc---------------cCCC
Confidence 455666655532 35789999997654311 11245566542 111121000 000 0112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE-YQFKASPYP 281 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~-~~F~T~p~~ 281 (612)
...+++++|+|++.|.|||......|...+|.. ..++|.+.+
T Consensus 78 ~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~ 120 (124)
T 1wis_A 78 ARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSG 120 (124)
T ss_dssp CSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSS
T ss_pred ceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCC
Confidence 345688999999999999987644455555654 468887643
No 112
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=95.68 E-value=0.069 Score=52.18 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=56.0
Q ss_pred CCCCCcceeeecCCC-C----CcEEEEEEeCCCCC------CCccEEEEeecCCCCccccCcceEEecCCcCCCCcccee
Q 007233 165 NPNAPVYPRLAQGKT-W----NEMTVTWTSGYGIN------EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVG 233 (612)
Q Consensus 165 ~~~~p~~~~La~~~~-~----~~m~V~W~t~~~~~------~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g 233 (612)
.|.+|.-+.+.+... . .++.|+|....... .-.-.|+|..++...+....
T Consensus 130 ~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~~~w~~~~------------------- 190 (236)
T 1axi_B 130 QPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNETKWKMMD------------------- 190 (236)
T ss_dssp CCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTCSSCEECC-------------------
T ss_pred ccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCCCceEEEe-------------------
Confidence 577887776544332 2 45999999864210 11345566554332221100
Q ss_pred ccCCCeEEEEEecCCCCCCEEEEEEeeecCCC--CccccceEEEEcC
Q 007233 234 WRDPGYIHTSFLKELWPNAMYTYKVGHRLFNS--TYIWSSEYQFKAS 278 (612)
Q Consensus 234 ~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg--~~~~S~~~~F~T~ 278 (612)
......+.|.+|+||++|..||.....+| -..||+...|+|+
T Consensus 191 ---~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p 234 (236)
T 1axi_B 191 ---PILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLP 234 (236)
T ss_dssp ---CBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCC
T ss_pred ---ccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECC
Confidence 01124567899999999999999876555 3467778888775
No 113
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=95.65 E-value=0.27 Score=50.21 Aligned_cols=85 Identities=20% Similarity=0.214 Sum_probs=49.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|..+.+.. .+.+++.|+|..... ....-.|+|...++... ....+. ++-....+
T Consensus 275 ~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~ 332 (368)
T 1fnf_A 275 VSDVPRDLEVVA-ATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTAT 332 (368)
T ss_dssp CCCSCEEEEEEE-EETTEEEEEEECCSS-CCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCCEEE
T ss_pred CCCCCCeeEEEe-cCCCEEEEEeeCCCC-ccceEEEEEEECCCCCc---cEEEEc-----------------CCCeeEEE
Confidence 455676665533 236899999987643 12234566665433211 001111 11234568
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
++||+||+.|.|+|......|...+|.
T Consensus 333 ~~~L~p~t~Y~~~V~A~~~~G~g~~s~ 359 (368)
T 1fnf_A 333 ISGLKPGVDYTITVYAVTGRGDSPASS 359 (368)
T ss_dssp ECSCCTTCCEEEEEEEECCCSSSCCBC
T ss_pred ecCCCCCCEEEEEEEEeCCCCcCcccC
Confidence 899999999999998765455444553
No 114
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.64 E-value=0.028 Score=50.60 Aligned_cols=40 Identities=20% Similarity=0.070 Sum_probs=32.0
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..++|+||+|+|.|..||......|.+.+|+...|+|++.
T Consensus 82 ts~~v~~L~P~T~Y~~rV~A~n~~G~G~~S~~~~f~T~~~ 121 (137)
T 1wk0_A 82 TNITLNDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSC 121 (137)
T ss_dssp SEEEECSCCTTCEECEEEEEEETTEECCCCCCCCEECCCS
T ss_pred cEEEEcCCCCCCEEEEEEEEEeCCCcCCCCCCEEEECCCC
Confidence 4678999999999999998654344456788889999864
No 115
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=95.60 E-value=0.049 Score=54.70 Aligned_cols=97 Identities=14% Similarity=0.138 Sum_probs=58.4
Q ss_pred CCCCCcceeeecC-CCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQG-KTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~-~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++... .+.++++|+|....... ...-.|+|...+...+...... + .++...
T Consensus 199 ~p~pP~~~~v~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~~~w~~~~~~------~------------~~~~~~ 260 (303)
T 1i1r_A 199 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE------D------------TASTRS 260 (303)
T ss_dssp ECCCCEEEEEECCSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTCSSCEECCGG------G------------GCSCCS
T ss_pred ecCCCcceEEEEecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCCCCceEEccc------c------------CCCcee
Confidence 5677877776543 35789999998754210 0123566665543322111000 0 012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTY---IWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~---~~S~~~~F~T~p 279 (612)
..+|++|+|+|.|.+||......|.+ .||+...|+|+.
T Consensus 261 ~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 261 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYE 301 (303)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCc
Confidence 56899999999999999976444443 456778898864
No 116
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.59 E-value=0.055 Score=46.32 Aligned_cols=91 Identities=16% Similarity=0.085 Sum_probs=51.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.. .+.+++.|+|..... .-..-.|+|...++... .... ++-...++
T Consensus 7 ~p~~P~~l~~~~-~t~~sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~-----~~~v-----------------~~~~t~~~ 62 (115)
T 2cuh_A 7 GPDGPTQLRALN-LTEGFAVLHWKPPQN-PVDTYDIQVTAPGAPPL-----QAET-----------------PGSAVDYP 62 (115)
T ss_dssp CCSSCEEEECCC-CSSSCEEEEEECCSS-CCSEEEEEEECSSSCCE-----EEEE-----------------ETTCSEEE
T ss_pred CCCCCcceEEEe-ccCCeEEEEEECCCC-CccEEEEEEEcCCCCcE-----EEEE-----------------CCCccEEE
Confidence 455676555432 237899999987532 11233466654322110 0110 11224578
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
|+||+|+|+|.++|......+... .....|+|.+.
T Consensus 63 l~~L~P~t~Y~~~V~A~~~~~~s~-~~~~~~~T~~~ 97 (115)
T 2cuh_A 63 LHDLVLHTNYTATVRGLRGPNLTS-PASITFTTGLE 97 (115)
T ss_dssp ECSCCSSSEEEEEEEEEETTEECC-CEEEEEESCCC
T ss_pred EeCCCCCCEEEEEEEEEeCCCcCC-CEEEEEEeCCC
Confidence 999999999999998753222211 23457888754
No 117
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=95.59 E-value=0.054 Score=51.62 Aligned_cols=124 Identities=12% Similarity=0.044 Sum_probs=64.8
Q ss_pred ceEEEEEEeecccceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccE
Q 007233 126 KGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAF 199 (612)
Q Consensus 126 ~~~~~~~l~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~ 199 (612)
..+-+|+.+..-..|.|.+-.-.... -..|.++.| .-|.+|.-+++......+++.|+|....... .-.-.
T Consensus 68 ~~~C~~~~~~~~~~Y~~~V~a~N~~G---~~~s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~~~~~l~ye 144 (206)
T 3v6o_A 68 FYECIFQPIFLLSGYTMWIRINHSLG---SLDSPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVFPENNLQFQ 144 (206)
T ss_dssp CEEEEECSCCTTSCEEEEEEEC---C---CEECCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC--------CEEEE
T ss_pred CceEEeCcHHhcccEEEEEEEEcCCc---cccCCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCCCCCcEEEE
Confidence 33555654444457777765431110 011333333 3677888777766545789999998764211 01344
Q ss_pred EEEeecCC-CCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccce
Q 007233 200 VQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE 272 (612)
Q Consensus 200 V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~ 272 (612)
|+|...+. ..+.. ... .......+.|.+|+|||+|..||......|.+.||+.
T Consensus 145 v~y~~~~~~~~w~~----~~~----------------~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSeW 198 (206)
T 3v6o_A 145 IRYGLSGKEVQWKM----YEV----------------YDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSNW 198 (206)
T ss_dssp EEEEESSSSCCCEE----EEE----------------CC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCCC
T ss_pred EEEEECCCCCceEE----Eec----------------ccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCCC
Confidence 55655431 12211 000 0111235789999999999999997754455567664
No 118
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=95.58 E-value=0.015 Score=59.78 Aligned_cols=68 Identities=21% Similarity=0.246 Sum_probs=41.6
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhhc--CCCe
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIAS--TVPY 362 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~s--~vP~ 362 (612)
.+++++||.|.. ...+.++++.. ...+.++++||+++ .|..+ .+.+..+..+.. .-.+
T Consensus 50 ~~i~viGDIHG~---------------~~~L~~ll~~~~~~~~~~~vflGD~VD-RG~~s--~evl~lL~~lk~~~p~~v 111 (309)
T 2ie4_C 50 CPVTVCGDVHGQ---------------FHDLMELFRIGGKSPDTNYLFMGDYVD-RGYYS--VETVTLLVALKVRYRERI 111 (309)
T ss_dssp SSEEEECCCTTC---------------HHHHHHHHHHHCCTTTSCEEECSCCSS-SSTTH--HHHHHHHHHHHHHCTTTE
T ss_pred CCEEEEecCCCC---------------HHHHHHHHHHcCCCCCCEEEEeCCccC-CCCCh--HHHHHHHHHHHhhCCCcE
Confidence 359999999843 23455555542 34677899999995 44332 122333322221 2348
Q ss_pred EEcCCCCccC
Q 007233 363 MIASGNHERD 372 (612)
Q Consensus 363 ~~v~GNHD~~ 372 (612)
+.+.||||..
T Consensus 112 ~~lrGNHE~~ 121 (309)
T 2ie4_C 112 TILRGNHESR 121 (309)
T ss_dssp EECCCTTSST
T ss_pred EEEeCCCCHH
Confidence 9999999975
No 119
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.55 E-value=0.042 Score=47.03 Aligned_cols=94 Identities=13% Similarity=0.158 Sum_probs=53.1
Q ss_pred CCCCCcceeeecC-CCCCcEEEEEEeCCCCCCCccEEEEe----ecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQG-KTWNEMTVTWTSGYGINEAEAFVQWG----RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~-~~~~~m~V~W~t~~~~~~~~~~V~yg----~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
.|.+|..+...+. .+.++++|+|....+ ...+...|. ..+ ..+. ... . ..++.
T Consensus 17 ~P~~P~~~~~~~~~~~~~sv~l~W~~p~~--~~~~i~~Y~v~~~~~~-~~~~------~~~-~------------~~~~~ 74 (121)
T 1wf5_A 17 LPHAPEHPVATLSTVERRAINLTWTKPFD--GNSPLIRYILEMSENN-APWT------VLL-A------------SVDPK 74 (121)
T ss_dssp CCCCCSSCEEEECSSSTTEEEEECCCCCC--CSSCEEEEEEEEECTT-CCCE------EEE-S------------SCCTT
T ss_pred CCccCCCcceeeEeccCCEEEEEEcCCCC--CCCcceEEEEEEEcCC-CCce------EeE-c------------ccCCC
Confidence 4567776622222 346899999986532 223444443 322 1111 000 0 00122
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceE-EEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEY-QFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~-~F~T~p~ 280 (612)
....+++||+|++.|.|||......|...+|..- .++|++.
T Consensus 75 ~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~ 116 (121)
T 1wf5_A 75 ATSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPES 116 (121)
T ss_dssp CCEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCC
T ss_pred ccEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCC
Confidence 3456889999999999999876545555566654 5677654
No 120
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.54 E-value=0.054 Score=45.99 Aligned_cols=85 Identities=13% Similarity=0.160 Sum_probs=52.1
Q ss_pred cCCCCCcceeeecCC-CCCcEEEEEEeCCC-----CCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCC
Q 007233 164 TNPNAPVYPRLAQGK-TWNEMTVTWTSGYG-----INEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 164 ~~~~~p~~~~La~~~-~~~~m~V~W~t~~~-----~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~ 237 (612)
.-|.+|..+++..-. ..+++.|+|..... ...-.-.|+|...+...+.. ...
T Consensus 6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~~w~~----~~~------------------ 63 (109)
T 1uc6_A 6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILDQWQH----VEL------------------ 63 (109)
T ss_dssp CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSCCCCC----EEE------------------
T ss_pred EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCCCcEE----Eec------------------
Confidence 456778777776543 46899999987642 01124567777654432211 000
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
.-...+.|.+|+||++|..||..... |.+.||+
T Consensus 64 ~~~~~~~l~~L~p~t~Y~~~VRa~~~-g~g~wS~ 96 (109)
T 1uc6_A 64 SNGTAHTITDAYAGKEYIIQVAAKDN-EIGTWSD 96 (109)
T ss_dssp SSCSEEEETTCCSSSCEEEEEECCBS-SSCCCCC
T ss_pred ccCCEEEEeCCCCCCEEEEEEEEEeC-CCCCcCc
Confidence 00124578999999999999997642 4444544
No 121
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.50 E-value=0.088 Score=44.99 Aligned_cols=91 Identities=15% Similarity=0.156 Sum_probs=52.5
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.+|..+++. .-+.++++|+|..... .-..-.|+|....+... ..... ++-...++|+
T Consensus 9 ~pP~~l~~~-~vt~tsi~vsW~pp~~-~i~~Y~I~y~~~~~~~~----~~~~v-----------------~~~~t~~~l~ 65 (108)
T 2ee3_A 9 APPRHLGFS-DVSHDAARVFWEGAPR-PVRLVRVTYVSSEGGHS----GQTEA-----------------PGNATSAMLG 65 (108)
T ss_dssp CCSSCEEEE-SCCSSCEEEEESCCSS-CCSEEEEEEEETTTCCB----CCEEE-----------------ETTCCEEEEC
T ss_pred CCCceEEEE-EccCCeEEEEeeCCCC-CccEEEEEEEeCCCCce----eEEEc-----------------CCCcCEEEcC
Confidence 466666653 2347899999986532 12334677765433211 00110 1122457899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 247 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
||+|+|+|..+|..-...|...-+ ...|+|.+.|
T Consensus 66 ~L~p~T~Y~v~V~A~~~~g~s~p~-~~~~~T~~vP 99 (108)
T 2ee3_A 66 PLSSSTTYTVRVTCLYPGGGSSTL-TGRVTTKKAP 99 (108)
T ss_dssp SCCSSCEEEEEEEEECTTSCEEEE-EEEEECCCCC
T ss_pred CCCCCCEEEEEEEEEeCCCcCCCc-cCEEEeCCCC
Confidence 999999999999865333332212 3468887433
No 122
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.43 E-value=0.13 Score=44.90 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=33.7
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
...++|+||+|+|.|.++|..-...|.+.+|+...|+|+..
T Consensus 74 ~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~ 114 (120)
T 1ujt_A 74 ERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEE 114 (120)
T ss_dssp CCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSS
T ss_pred cCEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCC
Confidence 35678999999999999998765556667899999999764
No 123
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=95.41 E-value=0.1 Score=43.38 Aligned_cols=75 Identities=23% Similarity=0.290 Sum_probs=45.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++.. .+.+++.|+|..... .-..-.|+|...+..... .... .++-.-.++|
T Consensus 2 p~~P~~l~~~~-~~~~sv~lsW~pP~~-~i~~Y~v~y~~~~~~~~~---~~~~-----------------~~~~~t~~~i 59 (100)
T 3b83_A 2 LQPPFNIKVTN-ITLTTAVVTWQPPIL-PIEGILVTFGRKNDPSDE---TTVD-----------------LTSSITSLTL 59 (100)
T ss_dssp CCCCEEEEEES-CCSSCEEEEEECCSS-CCSEEEEEEEESSCTTTC---EEEE-----------------ECTTEEEEEE
T ss_pred CccCCccEEEE-ecCCEEEEEEcCCcc-cCCEEEEEEEECCCCCCc---eEEE-----------------ECCcceEEEE
Confidence 45666666543 347899999987642 122345667644321100 0000 0223456789
Q ss_pred cCCCCCCEEEEEEeeec
Q 007233 246 KELWPNAMYTYKVGHRL 262 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~ 262 (612)
+||+|+|+|.+||....
T Consensus 60 ~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 60 TNLEPNTTYEIRIVARN 76 (100)
T ss_dssp CSCCTTCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998753
No 124
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=95.38 E-value=0.084 Score=50.84 Aligned_cols=106 Identities=16% Similarity=0.191 Sum_probs=61.7
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|..+++.. .+.++++|+|....+ ....-.|+|...++.... ..... +.....+|
T Consensus 6 ~~~P~~l~~~~-~~~~si~l~W~~p~g-~i~~Y~v~~~~~~~~~~~----~~~~~-----------------~~~~~~~i 62 (234)
T 3f7q_A 6 LGAPQNPNAKA-AGSRKIHFNWLPPSG-KPMGYRVKYWIQGDSESE----AHLLD-----------------SKVPSVEL 62 (234)
T ss_dssp CCCCEEEEEEE-CSSSCEEEEEECCSS-CCCEEEEEEEETTSCGGG----CEEEE-----------------ESSSEEEE
T ss_pred CCCCcceEEEE-cCCCEEEEEEECCCC-ccceEEEEEEECCCCccc----eEEEc-----------------CCccEEEE
Confidence 34566666533 246899999987632 223345667654332211 00110 11235678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC-CCCCCCeEEEEEee
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY-PGQNSLQRVVIFGD 294 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~-~g~~~~~rf~v~GD 294 (612)
+||+|+|.|.++|......|...+|....|+|... |.....+++...++
T Consensus 63 ~~L~p~t~Y~~~V~A~n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~ 112 (234)
T 3f7q_A 63 TNLYPYCDYEMKVCAYGAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSS 112 (234)
T ss_dssp CSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCCCCCCEEEECSS
T ss_pred CCCCCCCEEEEEEEEEeCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecC
Confidence 99999999999998764445556787888998743 22223355544433
No 125
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=95.36 E-value=0.03 Score=58.03 Aligned_cols=69 Identities=17% Similarity=0.260 Sum_probs=42.0
Q ss_pred CeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcCC---ccEEEEeCcccccCCchhHHHHHHHhhhhhh--cCC
Q 007233 286 LQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLKN---IDIVFHIGDICYANGYISQWDQFTAQIEPIA--STV 360 (612)
Q Consensus 286 ~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--s~v 360 (612)
..|++++||.|.. ...+.++++.... -+.++++||+++ .|..+ -+-+..+..+. ..-
T Consensus 63 ~~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~VD-RG~~s--~evl~lL~~lk~~~p~ 124 (335)
T 3icf_A 63 DVKISVCGDTHGQ---------------FYDVLNLFRKFGKVGPKHTYLFNGDFVD-RGSWS--CEVALLFYCLKILHPN 124 (335)
T ss_dssp TCEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTEEEEECSCCSS-SSTTH--HHHHHHHHHHHHHCTT
T ss_pred CceEEEEecCCCC---------------HHHHHHHHHHcCCCCCCcEEEEeCCccC-CCcCh--HHHHHHHHHHhhhCCC
Confidence 3689999999854 3345666665332 246999999995 44322 12222222221 123
Q ss_pred CeEEcCCCCccC
Q 007233 361 PYMIASGNHERD 372 (612)
Q Consensus 361 P~~~v~GNHD~~ 372 (612)
.++.+.||||..
T Consensus 125 ~v~llrGNHE~~ 136 (335)
T 3icf_A 125 NFFLNRGNHESD 136 (335)
T ss_dssp TEEECCCTTSSH
T ss_pred cEEEecCchhhh
Confidence 488999999953
No 126
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=95.34 E-value=0.072 Score=49.02 Aligned_cols=78 Identities=17% Similarity=0.203 Sum_probs=44.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
.|.+|..+++.. .+.+++.|+|....... ...-.|+|...+...+.. ... .-..
T Consensus 102 ~p~~p~~~~~~~-~~~~~v~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~-----~~~-----------------~~~~ 158 (197)
T 3lpw_A 102 RPLPPGKITLMD-VTRNSVSLSWEKPEHDGGSRILGYIVEMQTKGSDKWAT-----CAT-----------------VKVT 158 (197)
T ss_dssp CCCCCSCEEEEE-ECSSCEEEEECCCSCCTTSCCCEEEEEEEETTCSCCEE-----EEE-----------------ESSS
T ss_pred CCCCCcccEEEe-ccCCeEEEEecCCCcCCCCcccEEEEEEEeCCCCceEE-----eec-----------------cccc
Confidence 456777666542 23689999998753211 112355555443322111 000 0112
Q ss_pred EEEecCCCCCCEEEEEEeeecCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNS 265 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg 265 (612)
..++++|+|++.|.|+|......|
T Consensus 159 ~~~~~~L~p~t~Y~~~V~A~n~~G 182 (197)
T 3lpw_A 159 EATITGLIQGEEYSFRVSAQNEKG 182 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTE
T ss_pred EEEeCCcCCCCEEEEEEEEEeCCc
Confidence 457899999999999999764333
No 127
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.33 E-value=0.11 Score=43.69 Aligned_cols=91 Identities=21% Similarity=0.227 Sum_probs=51.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.-- +.+++.|+|..... .-..-.|+|...++. .. ... -++-...++
T Consensus 7 ~p~~P~~l~v~~~-~~~sv~lsW~~p~~-~i~~Y~i~y~~~~~~-~~----~~~-----------------~~~~~ts~~ 62 (105)
T 2cum_A 7 GLEAPRDLEAKEV-TPRTALLTWTEPPV-RPAGYLLSFHTPGGQ-TQ----EIL-----------------LPGGITSHQ 62 (105)
T ss_dssp TCCCCEEEEEESC-CSSCEEEEEECCSS-CCSEEEEEEECTTSC-EE----EEE-----------------ECSSCSEEE
T ss_pred CCCCCCceEEEec-cCCEEEEEEcCCCC-ccceEEEEEEeCCCc-eE----EEE-----------------ECCCccEEE
Confidence 4556766665432 36899999987532 112235666543221 10 000 012234678
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
|+||+|++.|.++|......|... .....|+|...
T Consensus 63 l~~L~p~t~Y~~~V~A~~~~g~s~-~~~~~~~T~~~ 97 (105)
T 2cum_A 63 LLGLFPSTSYNARLQAMWGQSLLP-PVSTSFTTGGL 97 (105)
T ss_dssp ECSCCTTCEEEEEEEEEBTTBCCC-CEEEEEECCCS
T ss_pred ECCCCCCCEEEEEEEEEeCCcccC-CEEEEEEeCCc
Confidence 999999999999998753333221 23467888643
No 128
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=95.29 E-value=0.021 Score=59.18 Aligned_cols=67 Identities=18% Similarity=0.186 Sum_probs=41.6
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhh--hcCCCeE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~s~vP~~ 363 (612)
+++++||.|.. ...+.++++.. ...+-++++||+++ .|..+. +-+..+..+ ...-.++
T Consensus 58 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vflGD~VD-RG~~s~--evl~lL~~lk~~~p~~v~ 119 (330)
T 1fjm_A 58 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYVD-RGKQSL--ETICLLLAYKIKYPENFF 119 (330)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCSS-SSSCHH--HHHHHHHHHHHHSTTTEE
T ss_pred ceEEecCCCCC---------------HHHHHHHHHHhCCCCcceEEeCCCcCC-CCCChH--HHHHHHHHhhhhcCCceE
Confidence 58999999853 23455666543 34577999999995 444321 222332222 1223589
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 120 ~lrGNHE~~ 128 (330)
T 1fjm_A 120 LLRGNHECA 128 (330)
T ss_dssp ECCCTTSSH
T ss_pred EecCCchHh
Confidence 999999964
No 129
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.25 E-value=0.033 Score=48.34 Aligned_cols=37 Identities=16% Similarity=0.058 Sum_probs=28.3
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccce-EEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSE-YQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~-~~F~T~p~ 280 (612)
.+.+|+|++.|.|||......|...||.. ..|+|.+.
T Consensus 77 ~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~ 114 (127)
T 1uey_A 77 AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKAS 114 (127)
T ss_dssp EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCS
T ss_pred EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCC
Confidence 36799999999999987654555567776 47888764
No 130
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=95.24 E-value=0.14 Score=48.05 Aligned_cols=91 Identities=18% Similarity=0.058 Sum_probs=51.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+.+ ...+.++++|+|....... -..-.|+|.. ....+.. ..+. ++....
T Consensus 109 ~P~~P~~~~~-~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~-~~~~~~~---~~~~-----------------~~~~~~ 166 (209)
T 2vkw_A 109 EPSAPKLEGQ-MGEDGNSIKVNLIKQDDGGSPIRHYLVRYRA-LSSEWKP---EIRL-----------------PSGSDH 166 (209)
T ss_dssp SCCCCEEEEE-ECTTSSCEEEEEECCCCTTSCCCEEEEEEEE-TTSCCCC---CEEE-----------------CTTCCE
T ss_pred CCCCCccccc-ccccCCeEEEEEECcccCCCCCceEEEEEEC-CCCCCce---eeec-----------------CCCccE
Confidence 3555655443 2335789999999863211 1224566665 2211110 0110 112234
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 277 (612)
.+|+||+|++.|.+||......|...+|+...+++
T Consensus 167 ~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~ 201 (209)
T 2vkw_A 167 VMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTA 201 (209)
T ss_dssp EEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC
T ss_pred EEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhh
Confidence 67999999999999998765455555666655554
No 131
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=95.23 E-value=0.047 Score=51.24 Aligned_cols=94 Identities=14% Similarity=0.054 Sum_probs=54.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCC-CCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.. +.++++|+|....+.. -..-.|+|..... ..+.... .... +...
T Consensus 5 ~P~~P~~~~~~~--~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~--~~~~-----------------~~~~ 63 (205)
T 1cfb_A 5 VPNAPKLTGITC--QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAY--EKVP-----------------NTDS 63 (205)
T ss_dssp CCCCCEEEEEEE--CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEE--EEEE-----------------TTCS
T ss_pred CCCCCCCcEEEe--cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeee--eccC-----------------CCce
Confidence 456788777766 7899999999763211 1123566654322 1111100 0000 1111
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcccc-ceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWS-SEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S-~~~~F~T~p~ 280 (612)
...+ +|+|++.|.|||......|...+| ....++|.+.
T Consensus 64 ~~~~-~L~p~t~Y~~~V~A~n~~G~~~~s~~~~~~~T~~~ 102 (205)
T 1cfb_A 64 SFVV-QMSPWANYTFRVIAFNKIGASPPSAHSDSCTTQPD 102 (205)
T ss_dssp EEEE-ECCSSEEEEEEEEEEETTEECCCCCCCCCEEECCC
T ss_pred EEEE-eCCCCCEEEEEEEEEECCccCCCCCCceeEEcCCc
Confidence 2345 999999999999875444545566 4577888754
No 132
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.15 E-value=0.067 Score=45.95 Aligned_cols=40 Identities=20% Similarity=0.057 Sum_probs=32.6
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
..++|+||+|+|.|.+||......|...+|+...|+|.+.
T Consensus 80 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 119 (125)
T 1uen_A 80 THGMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEG 119 (125)
T ss_dssp SEEEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCC
T ss_pred cEEEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCC
Confidence 4678999999999999998765556567888889999753
No 133
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=95.12 E-value=0.15 Score=47.95 Aligned_cols=103 Identities=12% Similarity=-0.055 Sum_probs=54.8
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+.+.. .+.++++|+|....+.....-.|+|...+..... ..... ++-....+|+|
T Consensus 25 ~P~~l~~~~-~~~~sv~lsW~~p~~~~i~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~i~~ 83 (203)
T 2gee_A 25 QPTDLSFVD-ITDSSIGLRWTPLNSSTIIGYRITVVAAGEGIPI---FEDFV-----------------DSSVGYYTVTG 83 (203)
T ss_dssp CCEEEEEEC-CTTTCEEEEEECCSSSSCCEEEEEEEESSSSSCC---EEEEE-----------------ETTCCEEEECS
T ss_pred CCCccEEEe-cCCCEEEEEecCCCCCCccEEEEEEEECCCCCCc---eeEEc-----------------CCCccEEEeCC
Confidence 454444322 2468999999986431112345666654332110 00000 01123567899
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEee
Q 007233 248 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGD 294 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
|+|++.|.++|...... +.|....+++...+.....+++...++
T Consensus 84 L~p~t~Y~~~V~a~~~~---g~s~~~~~~t~~~~p~P~~l~~~~~~~ 127 (203)
T 2gee_A 84 LEPGIDYDISVYTVKNG---GESTPTTLTQQTAVPPPTDLRFTNIGP 127 (203)
T ss_dssp CCTTCEEEEEEEEESSS---CBCCCEEEEEECCCCCCEEEEEEEEET
T ss_pred CCCCCEEEEEEEEEeCC---CccccEeeeecCCCcCCCceEEEEcCC
Confidence 99999999999876322 235555565544332333455554444
No 134
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=95.12 E-value=0.059 Score=45.54 Aligned_cols=86 Identities=15% Similarity=0.086 Sum_probs=46.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.. .+.++++|+|....... -..-.|+|...+...+..... .+....
T Consensus 8 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~--------------------~~~~~~ 66 (111)
T 1x5y_A 8 PTSAPQHLTVED-VTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANK--------------------EPVERC 66 (111)
T ss_dssp CCCCCEEEEEEE-ECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSS--------------------SCBSSS
T ss_pred CCcCCCCCEEEe-ccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccc--------------------cCCccc
Confidence 345565555433 24689999998754211 112345555443322211100 011123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
..++++|+|++.|.|||......|...+|.
T Consensus 67 ~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 96 (111)
T 1x5y_A 67 GFTVKDLPTGARILFRVVGVNIAGRSEPAT 96 (111)
T ss_dssp EEEEECCCTTCCEEEEEEEEETTEECCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEcCCcCCCCcc
Confidence 567899999999999998764333333343
No 135
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=95.09 E-value=0.13 Score=44.38 Aligned_cols=89 Identities=16% Similarity=0.187 Sum_probs=48.6
Q ss_pred eecCC-CCCcEEEEEEeCCCCCCCccEEEEeecCCCCc-----cccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 174 LAQGK-TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRT-----HSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 174 La~~~-~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~-----~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
|.+.+ +.++++|+|....+ .-..-.|+|....+... ......... ++-...++|+|
T Consensus 15 L~v~~~T~~Si~LsW~~p~g-~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v-----------------~~~~t~~~l~g 76 (112)
T 2cui_A 15 LSVTDVTTSSLRLNWEAPPG-AFDSFLLRFGVPSPSTLEPHPRPLLQRELMV-----------------PGTRHSAVLRD 76 (112)
T ss_dssp CEEESCCSSCEEEECCCCTT-SCSEEEEEEECCCCSSSCCCSSCCCCEEEEE-----------------ETTCCEEEECS
T ss_pred eEEEeecCCeEEEEECCCCC-CccEEEEEEEeCCCCccccccccCcceEEEc-----------------CCCcCEEEeCC
Confidence 33443 47899999987532 12345677775432100 000001111 12234689999
Q ss_pred CCCCCEEEEEEeeecCCCCccccceEEEEcCCCC
Q 007233 248 LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP 281 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~ 281 (612)
|+|||+|..+|......+.. -.-....+|.+.+
T Consensus 77 L~PgT~Y~~~V~A~~~~~~s-~p~~~~~~T~~~~ 109 (112)
T 2cui_A 77 LRSGTLYSLTLYGLRGPHKA-DSIQGTARTLSGP 109 (112)
T ss_dssp CCTTCEEEEEEEEECSSSEE-EEEEEEEECCCCS
T ss_pred CCCCCEEEEEEEEEECCccc-CCEEEEEEECCCC
Confidence 99999999999875322211 1224566776543
No 136
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.98 E-value=0.046 Score=46.91 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=55.4
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+.+|..+.+.. ..+++.|+|..+.... -..-.|+|.. ++..+..... .+ ++-....
T Consensus 8 ~~pP~~l~v~~--~~~sv~L~W~pP~~~~~~I~gY~vey~~-~~~~W~~~~~--~~-----------------~~~~t~~ 65 (108)
T 1v5j_A 8 LSPPRGLVAVR--TPRGVLLHWDPPELVPKRLDGYVLEGRQ-GSQGWEVLDP--AV-----------------AGTETEL 65 (108)
T ss_dssp CCCCEEEEEEE--CSSSEEEEEECCSCCSSCCCBEEEEEEE-TTCCCEEEEE--EE-----------------CSSCCEE
T ss_pred CCCCcceEEEE--eCCEEEEEECCCCCCCCCCcEEEEEEEe-CCCCcEEeee--ec-----------------CCCcCEE
Confidence 34666666644 3578999999875321 1234677876 2222321110 01 1223445
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
++.+|+|+++|.+||......|....|+...++|...
T Consensus 66 ~v~~L~pg~~Y~FRV~A~n~~G~s~pS~~~~v~T~~~ 102 (108)
T 1v5j_A 66 LVPGLIKDVLYEFRLVAFAGSFVSDPSNTANVSTSGL 102 (108)
T ss_dssp ECCCCCTTSCEECCBEEEETTEEEEECSCCCCCCSSC
T ss_pred EeCCCCCCCEEEEEEEEEcCCCCcCCCCCEEEEeCCc
Confidence 6999999999999998654445445566677777654
No 137
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=94.94 E-value=0.051 Score=55.77 Aligned_cols=68 Identities=16% Similarity=0.231 Sum_probs=41.0
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC---CccEEEEeCcccccCCchhHHHHHHHhhhhhh--cCCC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--s~vP 361 (612)
.|++++||.|.. ...+.++++... .-+.++++||+++. |..+ -+-+..+..+. ..-.
T Consensus 60 ~ri~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~~vflGD~VDR-G~~s--~evl~lL~~lk~~~p~~ 121 (315)
T 3h63_A 60 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFVDR-GSFS--VEVILTLFGFKLLYPDH 121 (315)
T ss_dssp CEEEEECCCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCSSS-STTH--HHHHHHHHHHHHHSTTT
T ss_pred ceEEEEecCCCC---------------HHHHHHHHHHhCCCCCCCEEEEeCCccCC-CcCh--HHHHHHHHHhhhhcCCc
Confidence 589999999853 234555665432 23469999999954 4322 12222222221 1235
Q ss_pred eEEcCCCCccC
Q 007233 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
++.+.||||..
T Consensus 122 v~~lrGNHE~~ 132 (315)
T 3h63_A 122 FHLLRGNHETD 132 (315)
T ss_dssp EEEECCTTSSH
T ss_pred EEEEecCcccc
Confidence 88899999964
No 138
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=94.87 E-value=0.15 Score=49.12 Aligned_cols=95 Identities=17% Similarity=0.228 Sum_probs=57.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC----CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN----EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
+.+|.-+++.... .+++.|+|....... .-.-.|+|..++. .+... ...+. .+..+
T Consensus 106 ~~pP~~l~~~~~~-~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~-~w~~~-~~~~~-----------------~~~~~ 165 (214)
T 2b5i_B 106 LMAPISLQVVHVE-THRCNISWEISQASHYFERHLEFEARTLSPGH-TWEEA-PLLTL-----------------KQKQE 165 (214)
T ss_dssp CCCCEEEEEEEEC-SSCEEEEEECCSCCGGGTTCEEEEEEEECTTS-CSTTS-CCEEE-----------------CSCCC
T ss_pred CCCCceEEEEEec-CCeEEEEECCCCccccCCCceEEEEEEecCCC-Chhee-eeeee-----------------cccce
Confidence 4677777776533 368999998864210 0134566655432 12111 11111 11234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCC-C---ccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNS-T---YIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg-~---~~~S~~~~F~T~p~ 280 (612)
.+.|.+|+||++|..||......| . ..||+...|+|.+.
T Consensus 166 ~~~l~~L~p~t~Y~vqVRa~~~~~~~G~WS~WS~~~~~~T~~~ 208 (214)
T 2b5i_B 166 WICLETLTPDTQYEFQVRVKPLQGEFTTWSPWSQPLAFRTKPA 208 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEEESCCSSCCCCCCCCCEEEECCC-
T ss_pred EEEeccCCCCCEEEEEEEEeeCCCCCCCccCCCCCEEEEcCCC
Confidence 677899999999999999875322 2 36788899999874
No 139
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=94.81 E-value=0.12 Score=47.56 Aligned_cols=108 Identities=11% Similarity=0.018 Sum_probs=57.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.- .+.++++|+|....... ...-.|+|...+...+.... .. ....
T Consensus 5 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~-----------------~~~~ 62 (197)
T 3lpw_A 5 TPGPPQDLKVKE-VTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVA----TN-----------------CHKT 62 (197)
T ss_dssp SCCCCEEEEEEE-ECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEE----EE-----------------ECSS
T ss_pred CCCCCCCcEEEE-ecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEee----cC-----------------CCcc
Confidence 456776665542 24689999999863211 11235556554332221100 00 0123
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC-CCCCCCCeEEEEEee
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP-YPGQNSLQRVVIFGD 294 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p-~~g~~~~~rf~v~GD 294 (612)
..++++|+|++.|.|+|......|...+|....+.|.. .|.....+++...++
T Consensus 63 ~~~~~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~ 116 (197)
T 3lpw_A 63 SWKVDQLQEGCSYYFRVLAENEYGIGLPAETAESVKASERPLPPGKITLMDVTR 116 (197)
T ss_dssp EEEECCCCTTCEEEEEEEEEETTEECCCEECSSCEESCCCCCCCSCEEEEEECS
T ss_pred EEEEcCCCCCCEEEEEEEEEcCccccCCCCCccceecCCCCCCCcccEEEeccC
Confidence 46789999999999999876444444445444444432 222223455554443
No 140
>3mpc_A FN3-like protein; fibronectin, FN(III), unknown function; 1.60A {Clostridium thermocellum}
Probab=94.80 E-value=0.09 Score=44.60 Aligned_cols=90 Identities=16% Similarity=0.117 Sum_probs=48.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecC-CCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKG-GDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
-|.+|..+........+++.|+|....+ +..+.-|+... +..+...+. .. .+. ..
T Consensus 4 ~P~aP~~l~a~~~~~~~~v~LsW~~~~~---~~~Y~VyR~~~~~~~~~~i~~--~~-----------------~~t--sy 59 (103)
T 3mpc_A 4 APAFPTGLSAVLDSSGNTANLTWNAAPG---ANSYNVKRSTKSGGPYTTIAT--NI-----------------TST--NY 59 (103)
T ss_dssp CCCCCEEEEEEECTTSCCEEEEEECCTT---CSEEEEEEESSTTCCCEEEEE--EE-----------------CSS--EE
T ss_pred CCCCCceeEEEEeCCCCEEEEEEECCCC---CCEEEEEEecCCCCCcEEEee--cC-----------------CCC--EE
Confidence 4567766665543345789999998532 44555565432 111111000 00 011 12
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
+.++|+||++|+|+|..-...|....|..-+.+++
T Consensus 60 ~d~~l~~g~~Y~Y~V~Avn~~geS~~S~~vs~~~~ 94 (103)
T 3mpc_A 60 TDTGVATGTKYYYVVSAVSNGVETLNSAEAILQYP 94 (103)
T ss_dssp EETTCCTTCCCEEEEEEEETTEECCCCCCEECBCC
T ss_pred EECCCCCCCEEEEEEEEEeCcCCcCCCccEEEECC
Confidence 35899999999999986543333344555554443
No 141
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=94.76 E-value=0.037 Score=56.44 Aligned_cols=67 Identities=18% Similarity=0.182 Sum_probs=40.9
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhh--hcCCCeE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPI--ASTVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l--~s~vP~~ 363 (612)
+++++||.|.. ...+.++++.. ...+-++++||+++. |..+. +-+..+..+ ...-.++
T Consensus 57 ~i~viGDIHG~---------------~~~L~~ll~~~g~~~~~~~vfLGD~VDr-G~~s~--evl~lL~~lk~~~p~~v~ 118 (299)
T 3e7a_A 57 PLKICGDIHGQ---------------YYDLLRLFEYGGFPPESNYLFLGDYVDR-GKQSL--ETICLLLAYKIKYPENFF 118 (299)
T ss_dssp SEEEECBCTTC---------------HHHHHHHHHHHCSTTSSCEEECSCCSSS-SSCHH--HHHHHHHHHHHHSTTTEE
T ss_pred CEEEEecCCCC---------------HHHHHHHHHHhCCCCCccEEeCCcccCC-CCCcH--HHHHHHHHHHhhCCCcEE
Confidence 48999999854 23455666543 345778899999954 43221 222222221 1123589
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 119 ~lrGNHE~~ 127 (299)
T 3e7a_A 119 LLRGNHECA 127 (299)
T ss_dssp ECCCTTSSH
T ss_pred EEecCchhh
Confidence 999999963
No 142
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=94.72 E-value=0.13 Score=48.35 Aligned_cols=42 Identities=19% Similarity=0.189 Sum_probs=32.4
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPG 282 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g 282 (612)
...+|.+|+|++.|.|||.....-|...+|....|+|+|..|
T Consensus 173 ~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p~~g 214 (215)
T 3mtr_A 173 GIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVQG 214 (215)
T ss_dssp TEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC---
T ss_pred ccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEeccccC
Confidence 456799999999999999876545666778888999998654
No 143
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=94.61 E-value=0.32 Score=47.32 Aligned_cols=95 Identities=20% Similarity=0.233 Sum_probs=58.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC----CCccEEEEeecC-CCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN----EAEAFVQWGRKG-GDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~----~~~~~V~yg~~~-~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
-|.+|.-+.+.......++.|+|......+ .-.-.|+|.... ...+.. ... ...
T Consensus 112 KPdPP~nLtv~~~~~~~~l~LsW~~P~~~~~~~~~L~YEVrYr~~~~~~~W~~----v~~-----------------~~t 170 (223)
T 3up1_A 112 KPEAPFDLSVVYREGANDFVVTFNTSHLQKKYVKVLMHDVAYRQEKDENKWTH----VNL-----------------SST 170 (223)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECGGGGCSSSCCEEEEEEEEESSCSSCCEE----EEE-----------------SSS
T ss_pred EcCCCcceEEEEEcCCCCEEEEECCCCCCCCcceeEEEEEEEEeCCCCCceEE----EEe-----------------cCc
Confidence 677888777776655677999998864211 113456666543 122211 000 112
Q ss_pred EEEEEecCCCCCCEEEEEEeeecC-CCC---ccccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLF-NST---YIWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~-dg~---~~~S~~~~F~T~p~ 280 (612)
...+.+.+|+|+++|..||..... .+. ..||+...|+|++.
T Consensus 171 ~~~i~l~~L~Pgt~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~ 215 (223)
T 3up1_A 171 KLTLLQRKLQPAAMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEI 215 (223)
T ss_dssp EEEEEGGGSCTTCEEEEEEEEEECSSCCBCCCCCCCCEEEECCCC
T ss_pred eeEEeccccCCCcEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCC
Confidence 234567899999999999997652 222 24677789999764
No 144
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=94.59 E-value=0.86 Score=51.52 Aligned_cols=42 Identities=14% Similarity=0.255 Sum_probs=31.6
Q ss_pred eEEEEEecCCCCCCEEEEEEeeecCCCCccccce---EEEEcCCC
Q 007233 239 YIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE---YQFKASPY 280 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~---~~F~T~p~ 280 (612)
-...++|+||+|++.|.+||......|...+|.. ..|+|.+.
T Consensus 332 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~ 376 (680)
T 1zlg_A 332 FQNSVILEKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHA 376 (680)
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCC
Confidence 3467889999999999999987644455555655 77888654
No 145
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=94.56 E-value=0.034 Score=47.98 Aligned_cols=76 Identities=14% Similarity=0.091 Sum_probs=44.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC---CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN---EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~---~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+++.. .+.++++|.|....... -..-.|+|...+...+..... .....
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~~w~~~~~---------------------~~~~~ 74 (120)
T 2yux_A 17 RPGPPQIVKIED-VWGENVALTWTPPKDDGNAAITGYTIQKADKKSMEWFTVIE---------------------HYHRT 74 (120)
T ss_dssp CCCCCSCEEEEE-EETTEEEEEECCCSCCCSSCCCCCCEEEEETTTCCCEEEES---------------------SCCSS
T ss_pred CCCcCCCCEEEE-ecCCEEEEEEcCCCcCCCCCceEEEEEEEECCCCceEEeee---------------------cCCcC
Confidence 456777766542 23579999998754211 112456666543332211100 01112
Q ss_pred EEEecCCCCCCEEEEEEeeec
Q 007233 242 TSFLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~ 262 (612)
..++++|+|++.|.|||....
T Consensus 75 ~~~v~~L~p~t~Y~frV~A~n 95 (120)
T 2yux_A 75 SATITELVIGNEYYFRVFSEN 95 (120)
T ss_dssp CCEECCCCSSEEEEEEECCCS
T ss_pred EEEECCCCCCCEEEEEEEEee
Confidence 347899999999999998753
No 146
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=94.56 E-value=0.19 Score=43.22 Aligned_cols=23 Identities=17% Similarity=0.293 Sum_probs=19.7
Q ss_pred eEEEEEecCCCCCCEEEEEEeee
Q 007233 239 YIHTSFLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 239 ~~h~a~ltgL~P~t~Y~Yrvg~~ 261 (612)
-...++++||+|++.|.+||...
T Consensus 69 ~~~~~~v~~L~p~t~Y~FRV~A~ 91 (115)
T 2ic2_A 69 KSFTASVTDLKPQHTYRFRILAV 91 (115)
T ss_dssp EEEEEEECSCCSSEEEEEEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEEEEE
Confidence 34567899999999999999865
No 147
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=94.54 E-value=0.11 Score=53.38 Aligned_cols=93 Identities=14% Similarity=0.045 Sum_probs=52.3
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++......++++|+|....+.....-.|+|....+..... ..... .+.....++
T Consensus 2 p~~P~~l~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 62 (368)
T 1fnf_A 2 LSPPTNLHLEANPDTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 62 (368)
T ss_dssp CCCCEEEEEEECSSSSCEEEEEECCSCSSCCEEEEEEEETTTCSSCC--EEEEE-----------------CTTCCEEEC
T ss_pred CCCCcceEEEecCCCcEEEEEEeCCCCCCceEEEEEEEECCCCCCce--eEEEe-----------------cCCcCEEEE
Confidence 45677777664443457999999864211223466666543321100 00000 112345689
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
++|+|++.|.|+|...... ++|...+..+.+.
T Consensus 63 ~~L~p~t~Y~~~V~a~~~~---g~s~~~~~~~~~~ 94 (368)
T 1fnf_A 63 DNLSPGLEYNVSVYTVKDD---KESVPISDTIIPA 94 (368)
T ss_dssp CCCCTTSCEEEEEEEEETT---EECCCEEEEECCC
T ss_pred CCCCCCCEEEEEEEEEcCC---CccCceeeeecCC
Confidence 9999999999999875322 3455445555443
No 148
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=94.51 E-value=0.15 Score=41.91 Aligned_cols=88 Identities=18% Similarity=0.131 Sum_probs=49.3
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.+|..+++.- .+.++++|+|..... .-..-.|+|....+.... ..... ++-...++|+
T Consensus 3 ~~P~~l~v~~-~~~~sv~l~W~~p~~-~i~~Y~v~y~~~~~~~~~---~~~~~-----------------~~~~~~~~i~ 60 (98)
T 3teu_A 3 DAPTDLQVTN-VTDTSITVSWTPPSA-TITGYRITYTPSNGPGEP---KELTV-----------------PPSSTSVTIT 60 (98)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECCSS-CCSEEEEEEEETTSCSCC---EEEEE-----------------CTTCSEEEEC
T ss_pred CCCCceEEEE-ecCCEEEEEEeCCCC-cccEEEEEEEECCCCCce---EEEEc-----------------CCCcCEEEec
Confidence 3555555432 235899999987632 112345677643321110 00111 1123456899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 247 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
||+|++.|.++|..... .+.|+..++.+.+
T Consensus 61 ~L~p~t~Y~~~V~A~n~---~G~s~p~~~~~~~ 90 (98)
T 3teu_A 61 GLTPGVEYVVSVYALKD---NQESPPLVGTQTT 90 (98)
T ss_dssp SCCTTCEEEEEEEEEET---TEECCCEEEEEEC
T ss_pred CCCCCCEEEEEEEEEeC---CCCCCCeEEEecc
Confidence 99999999999987532 2346655555544
No 149
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.45 E-value=0.18 Score=42.88 Aligned_cols=88 Identities=15% Similarity=0.074 Sum_probs=49.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++.. .+.+++.|+|......+. ..-.|+|...+.... ...... .+....
T Consensus 17 ~P~~P~~l~~~~-~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~ 75 (119)
T 1wfn_A 17 VPGPVGHLSFSE-ILDTSLKVSWQEPGEKNGILTGYRISWEEYNRTNT---RVTHYL-----------------PNVTLE 75 (119)
T ss_dssp SCCCCSCCEEES-CCSSEEEEECCCCTTCCSCCCEEEEEEEESSCGGG---CCCEEE-----------------CSSCCE
T ss_pred CCCCCCceEEEE-CCCCEEEEEEcCCCCCCCcEEEEEEEEEECCCCCc---eEEEEe-----------------CCCceE
Confidence 355565555432 246899999987542110 123455544322110 000110 123456
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceE
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEY 273 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~ 273 (612)
++|++|+|++.|.+||......|...||...
T Consensus 76 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 76 YRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 7889999999999999876545555566654
No 150
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=94.45 E-value=0.047 Score=56.88 Aligned_cols=67 Identities=19% Similarity=0.257 Sum_probs=40.7
Q ss_pred EEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc--CCccEEEEeCcccccCCchhHHHHHHHhhhhhh--cCCCeE
Q 007233 288 RVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL--KNIDIVFHIGDICYANGYISQWDQFTAQIEPIA--STVPYM 363 (612)
Q Consensus 288 rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~l~--s~vP~~ 363 (612)
+++++||.|.. ...+.++++.. ...+-++++||+++ .|..+. +-+..+..+. ..-.++
T Consensus 71 pi~ViGDIHG~---------------~~dL~~ll~~~g~~~~~~~vfLGD~VD-RG~~s~--Evl~lL~~lk~~~p~~v~ 132 (357)
T 3ll8_A 71 PVTVCGDIHGQ---------------FFDLMKLFEVGGSPANTRYLFLGDYVD-RGYFSI--ECVLYLWALKILYPKTLF 132 (357)
T ss_dssp SEEEECCCTTC---------------HHHHHHHHHHHCCTTTCCEEECSCCSS-SSTTHH--HHHHHHHHHHHHCTTTEE
T ss_pred cceeeccCCCC---------------HHHHHHHHHhcCCCCCcEEEECCCccC-CCcChH--HHHHHHHHhhhhcCCcEE
Confidence 58999999854 23455555542 34678999999994 443321 2222222221 123488
Q ss_pred EcCCCCccC
Q 007233 364 IASGNHERD 372 (612)
Q Consensus 364 ~v~GNHD~~ 372 (612)
.+.||||..
T Consensus 133 llrGNHE~~ 141 (357)
T 3ll8_A 133 LLRGNHECR 141 (357)
T ss_dssp ECCCTTSSH
T ss_pred EEeCchhhh
Confidence 999999964
No 151
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=94.43 E-value=0.19 Score=51.10 Aligned_cols=92 Identities=12% Similarity=0.122 Sum_probs=54.1
Q ss_pred CCCCCcceeeecCC-CCCcEEEEEEeCCCCCC----CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQGK-TWNEMTVTWTSGYGINE----AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~~-~~~~m~V~W~t~~~~~~----~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
-|.+|..+++.... +.+++.|+|........ ..-.|+|...+...+... .. .+.
T Consensus 196 ~P~pP~~l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W~~~------~~---------------~~~ 254 (325)
T 1n26_A 196 QPDPPANITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTFTTW------MV---------------KDL 254 (325)
T ss_dssp CCCCCEEEEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCCEEE------EC---------------GGG
T ss_pred CCCCCcceEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCCEEE------cc---------------cCC
Confidence 46778777776544 46899999998653211 123466665543332110 00 011
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccc---cceEEEEc
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIW---SSEYQFKA 277 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~---S~~~~F~T 277 (612)
-...+|.+|+|++.|.+||......|.+.| |+...++|
T Consensus 255 ~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~S~wS~~~~~~~ 295 (325)
T 1n26_A 255 QHHCVIHDAWSGLRHVVQLRAQEEFGQGEWSEWSPEAMGTP 295 (325)
T ss_dssp CSEEEESSCCTTCCEEEEEEEEETTTBSCCCCCCCCEEECC
T ss_pred ceEEEEeCCCCCCeEEEEEEEecCCCCCCCcCCCCccceec
Confidence 235678999999999999997643344444 44444444
No 152
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=94.38 E-value=0.14 Score=49.35 Aligned_cols=94 Identities=15% Similarity=0.118 Sum_probs=56.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|.-+++......+++.|+|........ -.-.|+|...++..+.. .... .+-..
T Consensus 121 ~p~pP~~l~~~~~~~~~~l~v~W~~P~~~~~~~~l~Yev~y~~~~~~~w~~---~~~~-----------------~~~~~ 180 (227)
T 1eer_B 121 LLDAPVGLVARLADESGHVVLRWLPPPETPMTSHIRYEVDVSAGQGAGSVQ---RVEI-----------------LEGRT 180 (227)
T ss_dssp ECCCCEEEEEEECSSTTCEEEEEECCSSCSCGGGEEEEEEEECCSSSCCCC---EEEE-----------------CTTCC
T ss_pred ccCcCcceEEEEcCCCCeEEEEEcCCCCcccccceEEEEEEEcCCCCCcEE---EEEE-----------------ecCce
Confidence 4678888887765457899999988643100 12355665443222210 0000 01123
Q ss_pred EEEecCCCCCCEEEEEEeeecCC----CC-ccccceEEEEcC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFN----ST-YIWSSEYQFKAS 278 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~d----g~-~~~S~~~~F~T~ 278 (612)
.+.|.+|+||++|..||...... |. ..||+...|+|+
T Consensus 181 ~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~~~~~t~ 222 (227)
T 1eer_B 181 ECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEPVSLLTP 222 (227)
T ss_dssp EEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCCEEEEC-
T ss_pred EEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCCEEEECc
Confidence 56789999999999999977421 11 457778889983
No 153
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=94.27 E-value=0.081 Score=57.35 Aligned_cols=68 Identities=16% Similarity=0.240 Sum_probs=41.8
Q ss_pred eEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhcC---CccEEEEeCcccccCCchhHHHHHHHhhhh--hhcCCC
Q 007233 287 QRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDLK---NIDIVFHIGDICYANGYISQWDQFTAQIEP--IASTVP 361 (612)
Q Consensus 287 ~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~pDfvl~~GDi~Y~~g~~~~wd~f~~~i~~--l~s~vP 361 (612)
.|++++||.|.. ...+.++++... ..|.++++||+++ .|..+ .+-+..+.. +...-.
T Consensus 213 ~~~~vigDiHG~---------------~~~l~~~l~~~~~~~~~~~~v~lGD~vd-rG~~s--~e~~~~l~~l~~~~~~~ 274 (477)
T 1wao_1 213 EKITVCGDTHGQ---------------FYDLLNIFELNGLPSETNPYIFNGDFVD-RGSFS--VEVILTLFGFKLLYPDH 274 (477)
T ss_dssp CEEEEECBCTTC---------------HHHHHHHHHHHCCCBTTBCEEEESCCSS-SSTTH--HHHHHHHHHHHHHSTTT
T ss_pred cceEEEeCCCCC---------------HHHHHHHHHHcCCCCCcCeEEEeccccC-CCcch--HHHHHHHHHHHhhCCCc
Confidence 689999999843 234556665432 2356999999995 44322 122222211 122457
Q ss_pred eEEcCCCCccC
Q 007233 362 YMIASGNHERD 372 (612)
Q Consensus 362 ~~~v~GNHD~~ 372 (612)
++.+.||||..
T Consensus 275 ~~~lrGNHE~~ 285 (477)
T 1wao_1 275 FHLLRGNHETD 285 (477)
T ss_dssp EEEECCTTSSH
T ss_pred eEeecCCccHH
Confidence 89999999953
No 154
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=94.21 E-value=0.18 Score=46.99 Aligned_cols=91 Identities=15% Similarity=0.235 Sum_probs=51.3
Q ss_pred CCcceeeec-CCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 168 APVYPRLAQ-GKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 168 ~p~~~~La~-~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
+|..+++.- +...++++|+|....+..-..-.|+|........ ...... ++-...++|+
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~i~ 61 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSVGR---WKEATI-----------------PGHLNSYTIK 61 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECCSSTTCCEEEEEEEETTCSSC---CEEEEE-----------------CTTCCEEEEC
T ss_pred CceeEEEEecCCCCCEEEEEEeCCCCCCceEEEEEEEECCCCCc---eEEEec-----------------CCCccEEEec
Confidence 455665543 2237899999998632122334566765432110 001111 1122367899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 247 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
||+|++.|.++|......|...++ ...|+|.+
T Consensus 62 ~L~p~t~Y~~~V~a~n~~G~~~~~-~~~~~t~~ 93 (201)
T 2ha1_A 62 GLKPGVVYEGQLISIQQYGHQEVT-RFDFTTTS 93 (201)
T ss_dssp SCCTTEEEEEEEEEECTTSCEEEE-EEEEEECC
T ss_pred CCCCCCEEEEEEEEEecccccCce-eEEEecCC
Confidence 999999999999876433443333 45666643
No 155
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=94.17 E-value=0.24 Score=45.46 Aligned_cols=90 Identities=11% Similarity=0.090 Sum_probs=50.9
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.. .+.++++|+|....+ ....-.|+|...++... .... ++-....+
T Consensus 6 ~p~~P~~l~~~~-~~~~sv~l~W~~p~~-~i~~Y~v~~~~~~~~~~-----~~~~-----------------~~~~~~~~ 61 (186)
T 1qr4_A 6 DLDNPKDLEVSD-PTETTLSLRWRRPVA-KFDRYRLTYVSPSGKKN-----EMEI-----------------PVDSTSFI 61 (186)
T ss_dssp --CCCEEEEEES-CCSSEEEEEEECCSS-CCSEEEEEEECTTCCEE-----EEEE-----------------CTTCSEEE
T ss_pred CCcCCCceEEEe-cCCCEEEEEEeCCCC-CccEEEEEEEeCCCCee-----EEEC-----------------CCCCCEEE
Confidence 456777666543 346899999997543 12345566653221110 0110 11123457
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccc--eEEEEcCCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSS--EYQFKASPYP 281 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~--~~~F~T~p~~ 281 (612)
|+||+|++.|.++|.... + .+.|. ...++|.|.+
T Consensus 62 i~~L~p~t~Y~~~V~a~~--~-~~~s~~~~~~~~t~p~~ 97 (186)
T 1qr4_A 62 LRGLDAGTEYTISLVAEK--G-RHKSKPTTIKGSTVVGS 97 (186)
T ss_dssp EESCCSSCEEEEEEEEES--S-SCBCCCEEEEEECCCCC
T ss_pred ECCCCCCCEEEEEEEEEc--C-CccCCCEEEEEECCCCC
Confidence 899999999999998753 2 22343 4567776543
No 156
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=94.12 E-value=0.052 Score=59.06 Aligned_cols=24 Identities=8% Similarity=0.065 Sum_probs=21.4
Q ss_pred hHHHHHHHHHhcCCeEEEecCccc
Q 007233 479 GRESLQKLWQKYKVDIAIYGHVHN 502 (612)
Q Consensus 479 ~r~~l~~l~~k~~VdlvlsGH~H~ 502 (612)
+.+.+...++++++++++-||.-.
T Consensus 261 G~d~v~~FL~~n~l~lIIRaHq~v 284 (521)
T 1aui_A 261 SYPAVCEFLQHNNLLSILRAHEAQ 284 (521)
T ss_dssp CHHHHHHHHHHTTCSEEEECCSCC
T ss_pred CHHHHHHHHHHcCCcEEEEccchh
Confidence 467899999999999999999865
No 157
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.03 E-value=0.25 Score=40.23 Aligned_cols=73 Identities=19% Similarity=0.208 Sum_probs=41.6
Q ss_pred CCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecC
Q 007233 168 APVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKE 247 (612)
Q Consensus 168 ~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltg 247 (612)
+|..+++.- .+.++++|+|..... .-..-.|+|....+... .. +.. ..+-...++|+|
T Consensus 4 ~P~~l~~~~-~~~~si~lsW~~p~~-~i~~Y~v~y~~~~~~~~-------~~-----~~~--------~~~~~~~~~l~~ 61 (94)
T 1j8k_A 4 RPKGLAFTD-VDVDSIKIAWESPQG-QVSRYRVTYSSPEDGIH-------EL-----FPA--------PDGEEDTAELQG 61 (94)
T ss_dssp CCCCCEEEE-EETTEEEEECCCCSS-CCSCEEEEEEETTTEEE-------EE-----CCC--------CCSSCCEEEECS
T ss_pred CCCccEEEe-ecCCEEEEEEcCCCC-CcceEEEEEEeCCCCCc-------eE-----Eec--------CCCCccEEEeCC
Confidence 455555542 235899999976531 11234566754322100 00 000 012235678999
Q ss_pred CCCCCEEEEEEeeec
Q 007233 248 LWPNAMYTYKVGHRL 262 (612)
Q Consensus 248 L~P~t~Y~Yrvg~~~ 262 (612)
|+||++|.++|....
T Consensus 62 L~p~t~Y~~~V~A~~ 76 (94)
T 1j8k_A 62 LRPGSEYTVSVVALH 76 (94)
T ss_dssp CCCCSEEEEEEEECS
T ss_pred CCCCCEEEEEEEEEc
Confidence 999999999998753
No 158
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=94.02 E-value=0.27 Score=40.62 Aligned_cols=84 Identities=19% Similarity=0.400 Sum_probs=52.7
Q ss_pred CCcceeeecCC-CCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccC---CCeEEEE
Q 007233 168 APVYPRLAQGK-TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRD---PGYIHTS 243 (612)
Q Consensus 168 ~p~~~~La~~~-~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~---~g~~h~a 243 (612)
.|.|+.++-.. .+++-.|.|.......-..-.+.|+.+... + -|++ |+.+..-
T Consensus 7 gpa~v~is~~~s~pdsh~iqW~~~s~s~I~eyiL~~R~k~~~------g-----------------~Wke~~Ip~h~nSY 63 (98)
T 1oww_A 7 GPVEVFITETPSQPNSHPIQWNAPQPSHISKYILRWRPKNSV------G-----------------RWKEATIPGHLNSY 63 (98)
T ss_dssp CCCEEECCCCSSCTTCEEEEEECCSSSCEEEEEEEEEETTCS------S-----------------CCEEEEECSSCCEE
T ss_pred cceEEEecCCCCCCCccceEEecCCCCCceEEEEEEEEcCCC------C-----------------ceeEEEecCccceE
Confidence 46666665443 489999999987431001233444443221 0 1222 5677778
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccce--EEEEc
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSE--YQFKA 277 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~--~~F~T 277 (612)
+|+||+||..|+=+|-+.. ..+|+++ +.|.|
T Consensus 64 tI~GL~P~~~YE~qv~S~~---ryG~~Evs~f~FtT 96 (98)
T 1oww_A 64 TIKGLKPGVVYEGQLISIQ---QYGHQEVTRFDFTT 96 (98)
T ss_dssp EECSCCSSEEEEEEEEEEE---SSSCEEEEEEEEEE
T ss_pred EEecCCCCcEEEEEEEEee---ccCcccceEEEEEe
Confidence 8999999999999998864 3567765 45555
No 159
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=93.83 E-value=0.48 Score=51.52 Aligned_cols=133 Identities=13% Similarity=0.192 Sum_probs=73.9
Q ss_pred ceEEEEEEeecccceEEEEEeCCCCCcE--EEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEE
Q 007233 126 KGSLKLMLINQRSDFSVALFSGGLLKPK--LVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQ 201 (612)
Q Consensus 126 ~~~~~~~l~n~r~~~~f~~f~~~~~~~~--~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~ 201 (612)
..+..|..+.....|.|.+-........ .+... ...-..|.+|..+++.. .+.+++.|+|....... .-.-.|+
T Consensus 341 ~~~C~~~~l~~~t~Y~f~V~A~N~lG~~~S~~~~~-~~~~VkP~PP~nl~v~~-~~stsl~LsW~~P~~~~~~~L~YeVr 418 (483)
T 3e0g_A 341 SYQLLFQMLPNQEIYNFTLNAHNPLGRSQSTILVN-ITEKVYPHTPTSFKVKD-INSTAVKLSWHLPGNFAKINFLCEIE 418 (483)
T ss_dssp CEEEEEECCTTCCCEEEEEEEECSSCEEEEEEEEC-GGGGBCCCCCEEEEECC-SSSSSCCEEEECCSCCTTSBCCCEEE
T ss_pred EEEEEEccCCCCcEEEEEEEEEeCCCCcccceEEE-eccccCCCCCeeeEEEE-ecCCeEEEEECCCCCCCCceEEEEEE
Confidence 4456666555555777776653211110 01110 01113567777777642 24689999998764211 1235677
Q ss_pred EeecCCCC-ccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEEEEc
Q 007233 202 WGRKGGDR-THSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNST---YIWSSEYQFKA 277 (612)
Q Consensus 202 yg~~~~~~-~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~~~S~~~~F~T 277 (612)
|...+... +.. .++. + ...-.+.+.|.+|+|+|+|..||... .+|. ..||+...|+|
T Consensus 419 Yr~~~~~~~~~~----vsv~-----~---------~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T 479 (483)
T 3e0g_A 419 IKKSNSVQEQRN----VTIQ-----G---------VENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLT 479 (483)
T ss_dssp EECSSSCCCEEE----CCCB-----C---------CSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCC
T ss_pred EEECCCCCceEE----EEEe-----c---------cCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeEC
Confidence 77654321 110 0000 0 00123456789999999999999987 4454 45778888988
Q ss_pred CC
Q 007233 278 SP 279 (612)
Q Consensus 278 ~p 279 (612)
+.
T Consensus 480 ~E 481 (483)
T 3e0g_A 480 TE 481 (483)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 160
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=93.75 E-value=0.29 Score=45.96 Aligned_cols=89 Identities=18% Similarity=0.204 Sum_probs=50.7
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
.+|..+++. ..+.+++.|+|..... .-..-.|+|........ ....+. ++-...++|+
T Consensus 105 ~~P~~l~v~-~~t~~si~l~W~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l~ 162 (195)
T 2qbw_A 105 SVPTNLEVV-AATPTSLLISWDASYY-GVSYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATIS 162 (195)
T ss_dssp CSSCCCEEE-EEETTEEEEECCCCCS-SCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCSEEEEC
T ss_pred CCCcccEEE-eCCCCEEEEEEeCCCC-CccEEEEEEEECCCCCc---ceEEEe-----------------CCCCCEEEeC
Confidence 345544442 2246899999976532 11234566765432110 000111 1122467899
Q ss_pred CCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007233 247 ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 277 (612)
||+|+|+|.++|..-...|....|+...|++
T Consensus 163 gL~p~t~Y~~~V~A~~~~G~g~~S~~v~~~~ 193 (195)
T 2qbw_A 163 GLKPGVDYTITVYAYSDYYGSHHYSPISINY 193 (195)
T ss_dssp SCCTTCEEEEEEEEESSTTSSCBCCCEEEEE
T ss_pred CCCCCCEEEEEEEEEeCCccCCCCCCEEEEe
Confidence 9999999999999765555544566555554
No 161
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=93.54 E-value=0.23 Score=43.12 Aligned_cols=74 Identities=20% Similarity=0.311 Sum_probs=44.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++.- .+.+++.|+|..... .-..-.|+|...++... ...... ++-...++|
T Consensus 29 ~~~P~~l~v~~-~t~~Si~lsW~~p~~-~i~~Y~V~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 86 (121)
T 2ocf_D 29 SDVPTKLEVVA-ATPTSLLISWDAPAV-TVRYYRITYGETGGNSP---VQEFTV-----------------PGSKSTATI 86 (121)
T ss_dssp CCSCEEEEEEE-ECSSCEEEEEECCSS-CCCEEEEEEEETTTCSC---BEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCccEEEe-cCCCEEEEEEcCCCC-CCcEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 35666666543 346899999987542 11234566765433210 000110 112346789
Q ss_pred cCCCCCCEEEEEEeee
Q 007233 246 KELWPNAMYTYKVGHR 261 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~ 261 (612)
+||+|+|.|.++|...
T Consensus 87 ~gL~P~t~Y~~~V~A~ 102 (121)
T 2ocf_D 87 SGLKPGVDYTITVYAV 102 (121)
T ss_dssp CCCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999875
No 162
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=93.39 E-value=0.22 Score=43.30 Aligned_cols=90 Identities=16% Similarity=0.083 Sum_probs=49.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
|.+|..+++.-. + ++++|+|......+ -..-.|+|... .. ...... -++-....
T Consensus 28 P~~P~~l~~~~~-~-~sv~l~W~~P~~~~g~i~~Y~v~y~~~-~~------~~~~~~---------------~~~~~~~~ 83 (126)
T 1x5i_A 28 PEVPSSLHVRPL-V-TSIVVSWTPPENQNIVVRGYAIGYGIG-SP------HAQTIK---------------VDYKQRYY 83 (126)
T ss_dssp CCSCSEEEEEEE-T-TEEEEEEECCSCTTBCCCEEEEEECSS-CG------GGEEEE---------------CCTTCCEE
T ss_pred CCCCCeeEEEec-C-CEEEEEEcCCCCCCCCEeEEEEEEEcC-CC------CceEEE---------------eCCCeeEE
Confidence 556666666554 3 89999998764211 01234555421 10 000000 01233556
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+|++|+|+++|.++|......|...++.. .++|.+.
T Consensus 84 ~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~-~~~T~~~ 119 (126)
T 1x5i_A 84 TIENLDPSSHYVITLKAFNNVGEGIPLYE-SAVTRPH 119 (126)
T ss_dssp EECSCCSSCEECCEEEEECSSCBCCCCCC-CEECCCC
T ss_pred EEeCCCCCCEEEEEEEEEeCCccCcceee-EEecccC
Confidence 89999999999999987644444444432 4555543
No 163
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=93.26 E-value=0.24 Score=54.02 Aligned_cols=133 Identities=14% Similarity=0.153 Sum_probs=74.3
Q ss_pred cceEEEEEEeecccceEEEEEeCCCCCcEEEEeeccccc-----cCCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCc
Q 007233 125 GKGSLKLMLINQRSDFSVALFSGGLLKPKLVAVSNKIAF-----TNPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAE 197 (612)
Q Consensus 125 g~~~~~~~l~n~r~~~~f~~f~~~~~~~~~~a~s~~~~~-----~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~ 197 (612)
+..+.+|.+...-..|.|.+..-..... ..| .+.| .-|.+|.-+++.. .+.+++.|+|....... .-.
T Consensus 345 ~~~~ct~~l~~~~t~Y~f~V~A~N~~G~---~~S-~~~~~~~~~v~P~PP~nl~v~~-~s~~sl~LsW~pP~~~~g~~l~ 419 (488)
T 2q7n_A 345 ETYRLGVQMHPGQEIHNFTLTGRNPLGQ---AQS-AVVINVTERVAPHDPTSLKVKD-INSTVVTFSWYLPGNFTKINLL 419 (488)
T ss_dssp SCEEEEEECCSSCCCCEEEEEEEETTEE---EEE-EEECCGGGTBCCCCCEEEEEEE-CSTTCEEEEEEEEEECSSSEEE
T ss_pred ceEEEEEcCCCCccEEEEEEEEEeCCCC---ccc-eEEEEecCCCCCCCCeEEEEEe-cCCCEEEEEEeCCCCCCCcceE
Confidence 4456667665433678887765211100 112 2222 2466777666543 35789999998763211 012
Q ss_pred cEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEE
Q 007233 198 AFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNST---YIWSSEYQ 274 (612)
Q Consensus 198 ~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~~~S~~~~ 274 (612)
-.|+|...+...+.. ..+... .....+.+.|.+|+|+|+|..||.... .|. ..||+...
T Consensus 420 YeV~Yr~~~~~~w~~---~~~~~~--------------~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~ 481 (488)
T 2q7n_A 420 CQIEICKANSKKEVR---NATIRG--------------AEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKR 481 (488)
T ss_dssp EEEEEBCTTSCCEEE---EEEEEC--------------CEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCC
T ss_pred EEEEEEECCCCCceE---EEEEec--------------CCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEe
Confidence 335555443221110 011100 012356779999999999999999776 555 36777788
Q ss_pred EEcCCC
Q 007233 275 FKASPY 280 (612)
Q Consensus 275 F~T~p~ 280 (612)
|+|++.
T Consensus 482 ~~T~e~ 487 (488)
T 2q7n_A 482 HLTTEA 487 (488)
T ss_dssp BCCCCC
T ss_pred EECCCC
Confidence 988763
No 164
>3tgx_A Interleukin-21 receptor; class I cytokine, class I cytokine receptor, sugarbridge, fibronectine domain, signaling, cytokine-cytokine receptor; HET: MAN FUL NAG BMA FUC; 2.80A {Homo sapiens}
Probab=93.17 E-value=0.38 Score=46.22 Aligned_cols=97 Identities=13% Similarity=0.190 Sum_probs=57.4
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCC-------CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCC
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGI-------NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~-------~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~ 237 (612)
-|.+|..+.+.. .+.+.|+|...... ..-.-.|+|...+. .+.... ..... ...
T Consensus 100 kp~PP~nltv~~---~~~l~lsW~~P~~~p~~~~~~~~L~Yevryr~~~~-~W~~~~-~~~~~--------------~~~ 160 (219)
T 3tgx_A 100 KPAPPFDVTVTF---SGQYQISWRSDYEDPAFYMLKGKLQYELQYRNRGD-PWAVSP-RRKLI--------------SVD 160 (219)
T ss_dssp CCCCCEEEEEEE---SSSEEEEEECGGGSGGGGGGTTSEEEEEEEEETTS-CTTSCC-EEEEE--------------CSS
T ss_pred EeCCCCceEEEe---CCCEEEEEeCCcCCccccccccCEEEEEEEecCCC-Cceecc-cceeE--------------ecC
Confidence 567787666652 46899999986421 01234566665542 221110 00000 001
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCC---c---cccceEEEEcCCC
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNST---Y---IWSSEYQFKASPY 280 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~---~~S~~~~F~T~p~ 280 (612)
+....+.+.+|+||++|..||......|. + .||+...|+|++.
T Consensus 161 ~~~~~~~~~~L~p~t~Y~vqVRa~~~~g~~~~G~WSeWS~~~~~~T~~~ 209 (219)
T 3tgx_A 161 SRSVSLLPLEFRKDSSYELQVRAGPMPGSSYQGTWSEWSDPVIFQTQSE 209 (219)
T ss_dssp CSEEEECTTSSCSSCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCC-
T ss_pred CCEEEEEeccCCCCCEEEEEEEEeeCCCCCCCCcCcCCCCCeEEECCch
Confidence 23456678899999999999997654332 3 4678899999875
No 165
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=93.12 E-value=0.33 Score=45.48 Aligned_cols=95 Identities=16% Similarity=0.270 Sum_probs=48.8
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCC-CCccccCcceEEecCCcCCCCccceec-cCCCeEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGG-DRTHSPAGTLTFDRGSMCGAPARTVGW-RDPGYIH 241 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~-~~~~~~~~~~t~~~~~mcg~pa~~~g~-~~~g~~h 241 (612)
+.+|..+++.. .+.++++|+|....... ...-.|+|...+. ..+........+.. +. + ...+-..
T Consensus 2 ~~pP~~~~~~~-~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~------~~----~~~~~~~~~ 70 (214)
T 2ibg_A 2 TYPPTPPNVTR-LSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGK------PK----WNSELGKSF 70 (214)
T ss_dssp CCCCCCCEEEE-EETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCS------SS----CSSSSEEEE
T ss_pred CCCCCCCEeeE-ecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccc------cc----cccccCcce
Confidence 34666666533 24689999998754311 1123345554332 22221111111000 00 0 0112456
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
..++++|+|++.|.|||......|...+|.
T Consensus 71 ~~~i~~L~p~t~Y~~~V~A~n~~g~~~~s~ 100 (214)
T 2ibg_A 71 TASVTDLKPQHTYRFRILAVYSNNDNKESN 100 (214)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTSCEEECC
T ss_pred eEEecCCcCCCEEEEEEEEEecCCCCCCCC
Confidence 778999999999999998653334333444
No 166
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=93.12 E-value=0.35 Score=49.62 Aligned_cols=105 Identities=15% Similarity=0.014 Sum_probs=55.5
Q ss_pred CCCcceeeecCCCCC-cEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 167 NAPVYPRLAQGKTWN-EMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 167 ~~p~~~~La~~~~~~-~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
.+|..+.+.... .+ +++|+|..........-.|+|....+..... ..... ++......|
T Consensus 4 ~~P~~l~~~~~~-~~~sv~l~W~~~~~~~~~~Y~v~~~~~~~~~~~~--~~~~~-----------------~~~~~~~~i 63 (375)
T 3t1w_A 4 SPPTNLHLEANP-DTGVLTVSWERSTTPDITGYRITTTPTNGQQGNS--LEEVV-----------------HADQSSCTF 63 (375)
T ss_dssp CCCEEEEEEEET-TTTEEEEEEECCSCSSCCEEEEEEEETTCTTSCC--EEEEE-----------------ETTCCEEEE
T ss_pred CCCCccEEEecC-CCeEEEEEEeCCCCCCeeeEEEEEEECCCCCCcc--eeEEc-----------------CCCccEEEE
Confidence 356556554433 45 9999999764211223466676543321100 00011 112345678
Q ss_pred cCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEee
Q 007233 246 KELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGD 294 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
++|+|++.|.|+|..... .++|....+++.+.......+++...++
T Consensus 64 ~~L~p~t~Y~~~V~a~~~---~g~s~~~~~~~~~~~p~p~~l~~~~~~~ 109 (375)
T 3t1w_A 64 DNLSPGLEYNVSVYTVKD---DKESVPISDTIIPEVPQLTDLSFVDITD 109 (375)
T ss_dssp CCCCTTCCEEEEEEEEET---TEECCCEEEEECCCCCCCSCCEEECCCS
T ss_pred cCCcCCCEEEEEEEEEcC---CCCCCcEEeeEcCCCCCCceEEEEecCC
Confidence 999999999999987532 2346555555543222223355444333
No 167
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=92.96 E-value=2.8 Score=40.88 Aligned_cols=136 Identities=12% Similarity=0.115 Sum_probs=65.2
Q ss_pred ccceEEEEEeC---CCCCcEEEEeeccccccCCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCcccc
Q 007233 137 RSDFSVALFSG---GLLKPKLVAVSNKIAFTNPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSP 213 (612)
Q Consensus 137 r~~~~f~~f~~---~~~~~~~~a~s~~~~~~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~ 213 (612)
...|.|.+... |.+.|..+..... ....+..|..++.... .++++|+|..... ....-.|+|...+.....
T Consensus 71 ~t~Y~~~V~A~n~~G~s~~s~~~~~~~-~~~~~~p~~~~~~~~~--~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~-- 144 (290)
T 3l5i_A 71 NDRYLATLTVRNLVGKSDAAVLTIPAC-DFQATHPVMDLKAFPK--DNMLWVEWTTPRE-SVKKYILEWCVLSDKAPC-- 144 (290)
T ss_dssp SSCEEEEEEEEESSCBCCCEEEEECCT-TCCCCCCCEEEEEEEE--TTEEEEEEECCSS-CCCEEEEEEEEECSSSCC--
T ss_pred CceEEEEEEEEcCCCCCCCceEEeecc-cccCCCccceeEEEeC--CCeEEEEEeCCCC-CCCcEEEEEEECCCCCCC--
Confidence 35677777652 3334443322211 0112223333444333 3699999988643 223456777654332110
Q ss_pred CcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC-CCCCCCeEEEEE
Q 007233 214 AGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY-PGQNSLQRVVIF 292 (612)
Q Consensus 214 ~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~-~g~~~~~rf~v~ 292 (612)
...+... ........++++|+|++.|.++|......|... +.....+|... |.....+++...
T Consensus 145 --~~~~~~~-------------~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~-~~~~~~~t~~~~P~~~p~~~~~~~ 208 (290)
T 3l5i_A 145 --ITDWQQE-------------DGTVHRTYLRGNLAESKCYLITVTPVYADGPGS-PESIKAYLKQAPPSKGPTVRTKKV 208 (290)
T ss_dssp --CCEEEEE-------------ETTCSEEECCSCCCTTCEEEEEEEEEETTEECC-CEEEEEESSCCCCSSCCCEEEEEE
T ss_pred --CcCeEEc-------------cCCCcceEEecCcCCccEEEEEEEEEeCCcccc-cEEEEeEccccCCCCCCeeeEeec
Confidence 0000000 012234566899999999999998654333222 33334445432 222223554444
Q ss_pred ee
Q 007233 293 GD 294 (612)
Q Consensus 293 GD 294 (612)
++
T Consensus 209 ~~ 210 (290)
T 3l5i_A 209 GK 210 (290)
T ss_dssp CS
T ss_pred cC
Confidence 43
No 168
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=92.86 E-value=0.16 Score=55.79 Aligned_cols=98 Identities=14% Similarity=0.132 Sum_probs=59.0
Q ss_pred CCCCCcceeeec-CCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQ-GKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~-~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+.. ....++++|+|....... ...-.|+|...++..+...... . ..+...
T Consensus 198 ~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~v~~~~~~~~~w~~~~~~---------~---------~~~~~~ 259 (589)
T 3l5h_A 198 KPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYNIQYRTKDASTWSQIPPE---------D---------TASTRS 259 (589)
T ss_dssp ECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEEEEEEETTCSCCBCCCTT---------S---------SCSCCS
T ss_pred EcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEEEEECCCCCCCcEEEccc---------c---------CcCcee
Confidence 467888787753 345789999998653210 0123556665443322211000 0 012234
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCcc---ccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYI---WSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~---~S~~~~F~T~p~ 280 (612)
..++++|+|+|.|.+||......|... ||+...|+|.+.
T Consensus 260 ~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~ 301 (589)
T 3l5h_A 260 SFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 301 (589)
T ss_dssp EEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCC
T ss_pred EEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCcc
Confidence 567899999999999999765445443 467777888764
No 169
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=92.83 E-value=0.25 Score=40.99 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=40.9
Q ss_pred CcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCC
Q 007233 169 PVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKEL 248 (612)
Q Consensus 169 p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL 248 (612)
|..+++. ..+.++++|+|....+ .-..-.|+|........ ...... ++-.-.++|+||
T Consensus 5 P~~l~v~-~~t~~Sv~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~~-----------------~~~~t~~~l~gL 62 (98)
T 3tes_A 5 PKNLVVS-EVTEDSLRLSWTAPDA-AFDSFMIQYQESEKVGE---AINLTV-----------------PGSERSYDLTGL 62 (98)
T ss_dssp CEEEEEE-SCCSSCEEEEEECCTT-SCSEEEEEEEETTBCSC---CEEEEE-----------------ETTCSEEEECSC
T ss_pred CCceEEE-ecCCCeEEEEecCCcC-ccceEEEEEEECCCCCc---eEEEEc-----------------CCCcCEEEECCC
Confidence 4444432 2347899999987643 11234567765432110 000111 111235789999
Q ss_pred CCCCEEEEEEeee
Q 007233 249 WPNAMYTYKVGHR 261 (612)
Q Consensus 249 ~P~t~Y~Yrvg~~ 261 (612)
+|+|.|.++|...
T Consensus 63 ~P~t~Y~~~V~A~ 75 (98)
T 3tes_A 63 KPGTEYTVSIYGV 75 (98)
T ss_dssp CTTCEEEEEEEEE
T ss_pred CCCCEEEEEEEEE
Confidence 9999999999875
No 170
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=92.71 E-value=0.52 Score=39.10 Aligned_cols=75 Identities=19% Similarity=0.248 Sum_probs=43.0
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCC-CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGI-NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~-~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
.+|..+++.- .+.++++|.|...... .-..-.|+|...++... ...... ++-...++|
T Consensus 6 ~~P~~l~v~~-~t~~Sv~l~W~~p~~~~~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 64 (101)
T 3k2m_C 6 SVPTKLEVVA-ATPTSLLISWDAPMSSSSVYYYRITYGETGGNSP---VQEFTV-----------------PYSSSTATI 64 (101)
T ss_dssp BSSCEEEEEE-EETTEEEEEECCCCTTSCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCcceEEee-cCCCEEEEEecCCCCCCceeeEEEEEEECCCCCc---cEEEEc-----------------CCCccEEEE
Confidence 3566666532 2468999999875410 11223567765432210 000111 112246789
Q ss_pred cCCCCCCEEEEEEeeec
Q 007233 246 KELWPNAMYTYKVGHRL 262 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~~ 262 (612)
+||+||+.|.++|....
T Consensus 65 ~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 65 SGLSPGVDYTITVYAWG 81 (101)
T ss_dssp CSCCTTCEEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEEe
Confidence 99999999999998653
No 171
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=92.46 E-value=0.39 Score=41.19 Aligned_cols=74 Identities=26% Similarity=0.432 Sum_probs=43.7
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
|.+|..+++.- .+.+++.|+|....+ .-..-.|+|....+... ....+. ++-...++|
T Consensus 4 P~~P~~L~v~~-~t~~Sv~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~~l 61 (114)
T 3qwq_B 4 SDVPRDLEVVA-ATPTSLLISWDSGRG-SYQYYRITYGETGGNSP---VQEFTV-----------------PGPVHTATI 61 (114)
T ss_dssp -CCCEEEEEEE-EETTEEEEEEECCSC-CCSEEEEEEEESSCSSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEEe-cCCCEEEEEEcCCcC-cccEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 45666655532 246899999987642 12334677765433210 001111 122345789
Q ss_pred cCCCCCCEEEEEEeee
Q 007233 246 KELWPNAMYTYKVGHR 261 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~ 261 (612)
+||+|+|.|..+|...
T Consensus 62 ~gL~P~T~Y~v~V~A~ 77 (114)
T 3qwq_B 62 SGLKPGVDYTITVYAV 77 (114)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999864
No 172
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=92.29 E-value=0.74 Score=45.02 Aligned_cols=105 Identities=15% Similarity=0.110 Sum_probs=58.1
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|..+++... +.++++|+|..... ....-.|+|......... ..... ++......
T Consensus 14 ~p~~P~~l~~~~~-~~~sv~l~W~~~~~-~~~~Y~v~~~~~~~~~~~---~~~~~-----------------~~~~~~~~ 71 (283)
T 1tdq_A 14 VIDGPTQILVRDV-SDTVAFVEWTPPRA-KVDFILLKYGLVGGEGGK---TTFRL-----------------QPPLSQYS 71 (283)
T ss_dssp SSCCCEEEEEEEE-CSSCEEEEEECCSS-CCSEEEEEEEESSSSCCC---EEEEE-----------------CTTCSEEE
T ss_pred CCCCCcEEEEEec-CCCeEEEEEECCCC-ceeEEEEEEEEecCCCCc---EEEEe-----------------CCCCCEEE
Confidence 4456777665432 35899999997641 122346777543221100 00111 11234567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCCCCCeEEEEEee
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQNSLQRVVIFGD 294 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~~~~~rf~v~GD 294 (612)
|++|+|++.|.++|......|... .....|+|+|.+. ..+++...++
T Consensus 72 i~~L~p~t~Y~~~V~a~~~~g~s~-~~~~~~~t~p~~P--~~l~~~~~~~ 118 (283)
T 1tdq_A 72 VQALRPGSRYEVSISAVRGTNESD-ASSTQFTTEIDAP--KNLRVGSRTA 118 (283)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECC-CEEEEEECCCCCC--EEEEEEEECS
T ss_pred ecCCCCCCEEEEEEEEECCCCCCC-CeeEEEECCCCCC--CceEEEecCC
Confidence 899999999999998764332211 2345677766432 2355544444
No 173
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=92.21 E-value=0.41 Score=46.07 Aligned_cols=36 Identities=14% Similarity=0.281 Sum_probs=26.4
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
.+++||+|+|.|.|||.....+|...-++.-.+||.
T Consensus 202 yt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 202 YTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 368999999999999997766665443445566663
No 174
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=92.09 E-value=0.39 Score=40.08 Aligned_cols=75 Identities=25% Similarity=0.430 Sum_probs=44.1
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCC--CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGI--NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~--~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
+.+|..+++.- .+.++++|+|...... .-..-.|+|...+.... ...... ++-...+
T Consensus 8 ~~~P~~l~v~~-~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~ts~ 66 (103)
T 3t04_D 8 SSVPTKLEVVD-ATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSP---VQEFTV-----------------PGYYSTA 66 (103)
T ss_dssp CCCCCSCEEEE-EETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSC---CEEEEE-----------------ETTCCEE
T ss_pred CCCCceeEEEe-cCCCEEEEEccCCCCCCCccceEEEEEEECCCCCc---cEEEEc-----------------CCCcCEE
Confidence 45676666542 2468999999875421 11123567765432110 000111 1223467
Q ss_pred EecCCCCCCEEEEEEeee
Q 007233 244 FLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~ 261 (612)
+|+||+|+++|.++|...
T Consensus 67 ~l~~L~p~t~Y~~~V~A~ 84 (103)
T 3t04_D 67 TISGLKPGVDYTITVYAY 84 (103)
T ss_dssp EECSCCTTCCEEEEEEEE
T ss_pred EeCCCCCCCEEEEEEEEE
Confidence 899999999999999875
No 175
>2lfe_A E3 ubiquitin-protein ligase HECW2; structural genomics, northeast structural genomics consortiu SGC; NMR {Homo sapiens}
Probab=92.08 E-value=1.7 Score=37.60 Aligned_cols=103 Identities=17% Similarity=0.206 Sum_probs=56.9
Q ss_pred EeeCCCceEEEccceecccCccccEEEEEEeCC-CCCCCCEEEEEeCCCCCCCCcCCCCCCCCCCCccCCCceeEEeccC
Q 007233 39 YALNDNAYVKASPAVVGLKGQNSEWVTVEYSSP-NPSVDDWIAVFSPSNFSASTCSAENPSVNPPLLCSAPIKYQYANYS 117 (612)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~d~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 117 (612)
+..++..+|++|-.-... | .+|.+.|.|.-- .-.+.||||+|--.. +||. ..+.|+-
T Consensus 29 vt~~sRSsLt~S~~~yti-G-~~q~lvI~WDIKEev~a~DWIGLy~ide----~~~~------------n~ld~kn---- 86 (138)
T 2lfe_A 29 VTSESRSSLTASMYEYTL-G-QAQNLIIFWDIKEEVDPSDWIGLYHIDE----NSPA------------NFWDSKN---- 86 (138)
T ss_dssp ----CCCEEEESCSEEET-T-CSCCEEEEEECCSCCCTTCEEEEEECCS----SCTT------------CCCEECC----
T ss_pred ecccccceeEEEeeEEEe-c-CCCcEEEEEeccCccCccceEEEEEecC----CCcc------------chhhhhc----
Confidence 445677778887654432 2 235699999984 788999999997643 3332 1122211
Q ss_pred CCCcccccceEEEEEEee----cc--cceEEEEEeCCCCCcEEEEeeccccccCC
Q 007233 118 SPQYKGTGKGSLKLMLIN----QR--SDFSVALFSGGLLKPKLVAVSNKIAFTNP 166 (612)
Q Consensus 118 ~~~~~~~g~~~~~~~l~n----~r--~~~~f~~f~~~~~~~~~~a~s~~~~~~~~ 166 (612)
-+-..+=+|.+.-.+-. ++ .-.-|.++.+... .|-|.++.|+..||
T Consensus 87 -Rgvngt~kGqi~W~i~~~~yf~e~eTkiCFKYYhg~Sg--aLRAtTP~iTVkNP 138 (138)
T 2lfe_A 87 -RGVTGTQKGQIVWRIEPGPYFMEPEIKICFKYYHGISG--ALRATTPCITVKNP 138 (138)
T ss_dssp -TTCSSCSEEEEEECCCSSTTCCSSEEEEEEEEEETTTT--EEEEECCCEEEECC
T ss_pred -cccccceeeeEEEEEcCCCccccceeEEEEEEecCccc--ceeecCceEEeeCC
Confidence 11111223333332211 22 2467888887544 67778888876665
No 176
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=91.84 E-value=5.1 Score=36.81 Aligned_cols=23 Identities=17% Similarity=0.197 Sum_probs=19.4
Q ss_pred EEEEEecCCCCCCEEEEEEeeec
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~ 262 (612)
...++|+||+|++.|.++|....
T Consensus 164 ~~~~~i~~L~p~t~Y~~~V~A~~ 186 (201)
T 2ha1_A 164 ATSVNIPDLLPGRKYIVNVYQIS 186 (201)
T ss_dssp CCEEEECSCCTTCEEEEEEEEEE
T ss_pred eeEEEeCCCCCCCEEEEEEEEEc
Confidence 34678999999999999998754
No 177
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=91.75 E-value=0.43 Score=40.73 Aligned_cols=74 Identities=14% Similarity=0.152 Sum_probs=43.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|..+++.-.. ++++|+|......+ -..-.|+|....... ..... ++-...
T Consensus 17 ~P~~P~~l~~~~~~--~sv~l~W~~P~~~ng~i~gY~i~y~~~~~~~-----~~~~~-----------------~~~~~~ 72 (116)
T 2edb_A 17 VPDQPSSLHVRPQT--NCIIMSWTPPLNPNIVVRGYIIGYGVGSPYA-----ETVRV-----------------DSKQRY 72 (116)
T ss_dssp CCCCCSCEEEEECS--SCEEEEECCCSCTTBCCCEEEEEEEESSTTS-----EEEEE-----------------ETTCCE
T ss_pred CCCCCCCeEEEECC--CEEEEEEcCCCCCCCceeEEEEEEEeCCCCe-----EEEEe-----------------CCCeeE
Confidence 35577777765543 89999998764211 012345565321100 00111 112345
Q ss_pred EEecCCCCCCEEEEEEeeec
Q 007233 243 SFLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~ 262 (612)
.+|+||+|+++|.+||....
T Consensus 73 ~~l~~L~p~t~Y~~~V~A~n 92 (116)
T 2edb_A 73 YSIERLESSSHYVISLKAFN 92 (116)
T ss_dssp EEECSCCSSSBEEEEEEEEE
T ss_pred EEeCCCCCCCEEEEEEEEEe
Confidence 68999999999999998753
No 178
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=91.59 E-value=0.31 Score=40.13 Aligned_cols=74 Identities=20% Similarity=0.344 Sum_probs=43.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEe
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFL 245 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~l 245 (612)
+.+|..+++.- .+.+++.|+|..... .-..-.|+|...++... ...... ++-...++|
T Consensus 5 ~~~P~~l~v~~-~t~~Si~lsW~~p~~-~i~~Y~v~y~~~~~~~~---~~~~~v-----------------~~~~t~~~l 62 (97)
T 3qht_C 5 SSVPTKLEVVA-ATPTSLLISWDASSS-SVSYYRITYGETGGNSP---VQEFTV-----------------PGSSSTATI 62 (97)
T ss_dssp CCSSSSCEEEE-EETTEEEEECCCCCS-SCCEEEEEEEESSSCSC---CEEEEE-----------------ETTCCEEEE
T ss_pred CCCCCceEEEe-cCCCEEEEEEeCCCC-CCCEEEEEEEECCCCCc---cEEEEe-----------------CCCcCEEEe
Confidence 45676666543 246899999987532 11234566765433210 000111 122346789
Q ss_pred cCCCCCCEEEEEEeee
Q 007233 246 KELWPNAMYTYKVGHR 261 (612)
Q Consensus 246 tgL~P~t~Y~Yrvg~~ 261 (612)
+||+|+++|.++|...
T Consensus 63 ~~L~p~t~Y~v~V~A~ 78 (97)
T 3qht_C 63 SGLSPGVDYTITVYAY 78 (97)
T ss_dssp CSCCTTCEEEEEEEEE
T ss_pred CCCCCCCEEEEEEEEE
Confidence 9999999999999864
No 179
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=90.97 E-value=2.2 Score=43.47 Aligned_cols=94 Identities=16% Similarity=0.151 Sum_probs=51.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.+.+|..+++.. .+.++++|+|..........-.|+|...+.... ...... .+-....+
T Consensus 186 ~~~~p~~l~~~~-~~~~si~l~W~~p~~~~i~~Y~v~~~~~~~~~~---~~~~~~-----------------~~~~~~~~ 244 (375)
T 3t1w_A 186 AVPPPTDLRFTN-IGPDTMRVTWAPPPSIDLTNFLVRYSPVKNEED---VAELSI-----------------SPSDNAVV 244 (375)
T ss_dssp CCCCCEEEEEES-CCSSCEEEEEECCSSCCCCEEEEEEEEGGGTTC---CEEEEE-----------------CTTCCEEE
T ss_pred CCCCCceeEEEe-cccCEEEEEEcCCCCCCccEEEEEEEeCCCCCC---cEEEEc-----------------CCCcCEEE
Confidence 344666665532 247899999997532222345666665432110 000111 11234567
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
+++|+|++.|.++|......|.... ....++|.|.
T Consensus 245 i~~L~p~t~Y~~~V~A~~~~g~s~~-~~~~~~t~p~ 279 (375)
T 3t1w_A 245 LTNLLPGTEYVVSVSSVYEQHESTP-LRGRQKTGLD 279 (375)
T ss_dssp ECSCCTTCEEEEEEEEEETTEECCC-EEEEEECCCC
T ss_pred eCCCCCCCEEEEEEEEEcCCCcCCc-eeeEEecCCC
Confidence 8999999999999987543332221 2344566554
No 180
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=90.26 E-value=0.53 Score=40.30 Aligned_cols=37 Identities=14% Similarity=-0.049 Sum_probs=30.0
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
.+.+. |+|++.|.+||......|...+|+...|+|..
T Consensus 74 ~~~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~ 110 (117)
T 1wj3_A 74 SAELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRIT 110 (117)
T ss_dssp EEEEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCC
T ss_pred EEEEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCC
Confidence 45666 99999999999876656667788888999865
No 181
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=89.98 E-value=0.85 Score=42.36 Aligned_cols=38 Identities=11% Similarity=-0.160 Sum_probs=27.5
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCcc-ccceEEEEcC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYI-WSSEYQFKAS 278 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~-~S~~~~F~T~ 278 (612)
...+|+||+|++.|.+||......|... +|+.-.++|.
T Consensus 164 ~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~ 202 (205)
T 1cfb_A 164 NNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSG 202 (205)
T ss_dssp CEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESS
T ss_pred cEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecC
Confidence 4567899999999999998764444444 3556666664
No 182
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.93 E-value=0.18 Score=42.29 Aligned_cols=76 Identities=20% Similarity=0.287 Sum_probs=43.0
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
.|.+|..+++.- .+.+++.|+|..... .-..-.|+|....+... ..... -++-...++
T Consensus 7 ~p~~P~~l~v~~-~t~~si~lsW~~p~g-~i~~Y~v~y~~~~~~~~---~~~~~-----------------v~~~~~~~~ 64 (105)
T 2ekj_A 7 GRSPPSNLALAS-ETPDSLQVSWTPPLG-RVLHYWLTYAPASGLGP---EKSVS-----------------VPGARSHVT 64 (105)
T ss_dssp TCCCCEEEEEEE-EETTEEEEEEECCSS-CCSBBCBBCCCTTSCSC---CCCBC-----------------CBTTSSEEE
T ss_pred CCCCCCceEEEe-CCCCEEEEEEeCCCC-cceEEEEEEEECCCCCc---cEEEE-----------------eCCCcCEEE
Confidence 455677666542 236899999988632 11223444543222100 00000 012235678
Q ss_pred ecCCCCCCEEEEEEeeec
Q 007233 245 LKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~ 262 (612)
|+||+|+|.|.++|....
T Consensus 65 l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 65 LPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp ECSCCSSCCCBCBBCBBC
T ss_pred eCCCCCCCEEEEEEEEEe
Confidence 999999999999998653
No 183
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=89.68 E-value=3.9 Score=46.22 Aligned_cols=95 Identities=12% Similarity=0.080 Sum_probs=54.0
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCC----CCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGI----NEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~----~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
.+|..+.+.. .+.++++|+|...... ....-.|+|............. .. +..++....
T Consensus 361 ~~P~~~~~~~-~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~---~~-------------~~~~~~~~~ 423 (731)
T 2v5y_A 361 RGPRKLEVVE-VKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREE---VS-------------WDTENSHPQ 423 (731)
T ss_dssp CCCEEEEEEE-ECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEE---EE-------------CCSSCSSCE
T ss_pred CCCceeEEEe-ccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCcccee---EE-------------EEecCCcce
Confidence 5566665432 2468999999875210 0012457776543221100000 00 001122345
Q ss_pred EEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 243 SFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
.+|++|+|++.|.+||......|.. .|....++|..
T Consensus 424 ~~i~~L~p~t~Y~~~V~A~n~~G~s-~S~~~~~~T~~ 459 (731)
T 2v5y_A 424 HTITNLSPYTNVSVKLILMNPEGRK-ESQELIVQTDE 459 (731)
T ss_dssp EEECSCCSSCEEEEEEEEECSSCEE-ECCCEEEECCC
T ss_pred EEECCCCCCCEEEEEEEEEcCCCCC-CCceEEEEccC
Confidence 6899999999999999876444543 47788888865
No 184
>3csg_A MBP, maltose-binding protein monobody YS1 fusion, MMBP; engineered binding protein, antibody mimic, synthetic protein interface; 1.80A {Escherichia coli} PDB: 2obg_A 3csb_A* 3a3c_A* 3d4g_A* 3d4c_A* 3ef7_A*
Probab=89.67 E-value=0.52 Score=50.39 Aligned_cols=75 Identities=21% Similarity=0.368 Sum_probs=44.6
Q ss_pred CCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEec
Q 007233 167 NAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLK 246 (612)
Q Consensus 167 ~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~lt 246 (612)
..|..+|+. ..+.++++|+|..+.+..-..-.|+|.++..... ....+. ++--.+++|+
T Consensus 371 ~~~~~l~~~-~~~~~s~~l~W~~p~~~~~~~y~v~y~~~~~~~~---~~~~~~-----------------~~~~~~~~i~ 429 (461)
T 3csg_A 371 SVPTNLEVV-AATPTSLLISWDASYSSSVSYYRITYGETGGNSP---VQEFTV-----------------PGSKSTATIS 429 (461)
T ss_dssp CSSCCCEEE-EECSSCEEEECCCTTGGGCSEEEEEEEETTCCSC---CEEEEE-----------------ETTCCEEEEC
T ss_pred CCCcceEEe-ccCCCeEEEEecCCCCCcceEEEEEEEECCCCcc---ceEEEe-----------------cCCCceEEec
Confidence 356666653 2346889999987522111234566766532110 011111 1223678999
Q ss_pred CCCCCCEEEEEEeeec
Q 007233 247 ELWPNAMYTYKVGHRL 262 (612)
Q Consensus 247 gL~P~t~Y~Yrvg~~~ 262 (612)
||+|||+|..+|....
T Consensus 430 ~L~p~t~Y~~~v~a~~ 445 (461)
T 3csg_A 430 GLSPGVDYTITVYAYS 445 (461)
T ss_dssp SCCTTCEEEEEEEEEC
T ss_pred CCCCCCEEEEEEEEEe
Confidence 9999999999999763
No 185
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=89.63 E-value=0.69 Score=43.47 Aligned_cols=91 Identities=20% Similarity=0.261 Sum_probs=52.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|.-+++.... .+.+.|+|........-.-.|+|....+..+.. ... .......
T Consensus 98 kP~pP~~l~~~~~~-~~~l~l~W~~p~~~~~l~yev~y~~~~~~~w~~----~~~------------------~~~~~~~ 154 (199)
T 2b5i_C 98 IPWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTE----QSV------------------DYRHKFS 154 (199)
T ss_dssp ECCCCEEEEEEEEE-TTEEEEEEECSSCSTTCEEEEEEEETTCSSCEE----EEE------------------CSSCEEE
T ss_pred ecCCCcEEEEEECC-CCCEEEEECCCCCCCceEEEEEEeecCCcccEE----Eec------------------cCceEEE
Confidence 46778776666543 378999999864211123457787654433321 000 0123556
Q ss_pred ecCCCCCCEEEEEEeeecCC---CCc---cccceEEEEcC
Q 007233 245 LKELWPNAMYTYKVGHRLFN---STY---IWSSEYQFKAS 278 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~d---g~~---~~S~~~~F~T~ 278 (612)
|.+|+|+++|..||...... ..+ .||+...|.|.
T Consensus 155 l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 155 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp ECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred ecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 89999999999999987532 123 34555666653
No 186
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=89.36 E-value=0.33 Score=40.48 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=37.3
Q ss_pred CCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEE
Q 007233 179 TWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKV 258 (612)
Q Consensus 179 ~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrv 258 (612)
+.++++|+|..... .-..-.|+|....+... ..... -++-.-.++|+||+|||+|.-+|
T Consensus 18 t~~S~~lsW~~p~~-~v~~Y~I~y~~~~g~~~---~~~~~-----------------v~g~~~s~~l~~L~PgT~Y~V~v 76 (95)
T 2h41_A 18 TASSFVVSWVSASD-TVSGFRVEYELSEEGDE---PQYLD-----------------LPSTATSVNIPDLLPGRKYIVNV 76 (95)
T ss_dssp GGGCEEEECCCSCT-TEEEEEEEEEETTTCCC---CEEEE-----------------EETTCCEEEECSCCTTCEEEEEE
T ss_pred CCCeEEEEECCCCC-CccEEEEEEEeCCCCCc---ceEEE-----------------CCCCccEEEECCCCCCCEEEEEE
Confidence 37899999987532 11234556655432110 00011 12334567899999999999998
Q ss_pred eee
Q 007233 259 GHR 261 (612)
Q Consensus 259 g~~ 261 (612)
...
T Consensus 77 ~a~ 79 (95)
T 2h41_A 77 YQI 79 (95)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 187
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=89.26 E-value=1 Score=48.56 Aligned_cols=143 Identities=11% Similarity=0.195 Sum_probs=76.9
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHH----------hcCCccEEEEeCcccccCCc------------
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQ----------DLKNIDIVFHIGDICYANGY------------ 342 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~----------~~~~pDfvl~~GDi~Y~~g~------------ 342 (612)
...++++++|++.+.... . ....++.+...+. ...++.-+|++||.+...+.
T Consensus 199 ~~~~ialVSGL~igs~~~----~--~~~~~~ll~d~L~G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~ 272 (476)
T 3e0j_A 199 TDRFVLLVSGLGLGGGGG----E--SLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLT 272 (476)
T ss_dssp SCCEEEEECCCCBTSSCH----H--HHHHHHHHHHHHHTCSSCHHHHHHHTTEEEEEEESCSBCC-------------CH
T ss_pred CCCEEEEECCcccCCCcc----c--chHHHHHHHHHHcCCCCCccccchhhceeEEEEECCccccccccchhhhhhhccc
Confidence 346899999999986310 0 0112233322221 12568899999999965321
Q ss_pred -------hhHHHHHHHhhhhhhcCCCeEEcCCCCccCCCCCCCCCCCCCCCCccccccce---eeecCCCCCCceEEEEE
Q 007233 343 -------ISQWDQFTAQIEPIASTVPYMIASGNHERDWPGTGSFYGNKDSGGECGVLAET---MFYVPAENRAKFWYSTD 412 (612)
Q Consensus 343 -------~~~wd~f~~~i~~l~s~vP~~~v~GNHD~~~~~~~~~y~~~dsgge~g~~~~~---~f~~P~~~~~~~~Ysfd 412 (612)
..+.+++-+.+..+.+.+|+.+.|||||-... .. ....-.+|-.+-.. .+.. -.|. |.|+
T Consensus 273 ~~~~~~~~~~~~~ld~~L~~l~~~i~V~lmPG~~DP~~~---~l--PQqplh~~lfp~s~~~~~~~~----vtNP-~~~~ 342 (476)
T 3e0j_A 273 KKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNY---TL--PQQPLHPCMFPLATAYSTLQL----VTNP-YQAT 342 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCEEEECCTTSSSCS---SS--SCCCCCTTSCHHHHTSTTEEE----CCSS-EEEE
T ss_pred cccchhhHHHHHHHHHHHHhcccCceEEecCCCCCcccc---cC--CCCCcCHHHhhhhhhcCccEE----eCCC-eEEE
Confidence 02334444555667789999999999996421 00 00000111111000 1111 1222 5699
Q ss_pred eCCEEEEEEeCCC--C---CCCCHHHHHHHHHHHhh
Q 007233 413 YGMFRFCVADTEH--D---WREGTEQYKFIEHCLAS 443 (612)
Q Consensus 413 ~G~v~fi~Ldt~~--~---~~~~~~Q~~WL~~~La~ 443 (612)
+++++|++..... + +.+...-.+.|++.|+-
T Consensus 343 i~G~~~LgtsGqnidDi~ky~~~~~~l~~me~~Lkw 378 (476)
T 3e0j_A 343 IDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRV 378 (476)
T ss_dssp ETTEEEEECSSHHHHHHHHHSCCCCHHHHHHHHHHB
T ss_pred ECCEEEEEECCCCHHHHHhcCCCCCHHHHHHHHHHH
Confidence 9999999875431 1 12233456788888874
No 188
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=89.05 E-value=1.1 Score=45.13 Aligned_cols=104 Identities=13% Similarity=0.224 Sum_probs=56.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHT 242 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~ 242 (612)
-|.+|.-+++.. ..+++.|+|........ -.-.|+|...++..+.. .......|....- .........
T Consensus 199 ~P~pP~~l~~~~--~~~~l~lsW~~P~~~~~~~l~Yev~y~~~~~~~w~~-----~~~~~~~c~~~~~---~~~~~~~~~ 268 (314)
T 3bpo_C 199 KPDPPHIKNLSF--HNDDLYVQWENPQNFISRCLFYEVEVNNSQTETHNV-----FYVQEAKCENPEF---ERNVENTSC 268 (314)
T ss_dssp ECCCCEEEEEEE--ETTEEEEEEECCTTCCGGGEEEEEEEEC--CCCEEE-----EEESCCCCCCTTS---SCCCSSEEE
T ss_pred eeCCCCEEEEEE--cCCcEEEEEeCCCccCCceEEEEEEEEECCCCcceE-----Eeccccccccccc---ccccCCceE
Confidence 467787777753 35799999998742111 12346666543332210 0000111221000 001123567
Q ss_pred EEecCCCCCCEEEEEEeeecC------CCC-ccccceEEEEcC
Q 007233 243 SFLKELWPNAMYTYKVGHRLF------NST-YIWSSEYQFKAS 278 (612)
Q Consensus 243 a~ltgL~P~t~Y~Yrvg~~~~------dg~-~~~S~~~~F~T~ 278 (612)
+.|.+|+|+++|..||..... .|. ..||+...|.+.
T Consensus 269 ~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~ 311 (314)
T 3bpo_C 269 FMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKK 311 (314)
T ss_dssp EEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCC
T ss_pred EEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEeccc
Confidence 789999999999999997653 232 356666677553
No 189
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=89.00 E-value=3 Score=42.41 Aligned_cols=93 Identities=15% Similarity=0.120 Sum_probs=54.6
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCcc----EEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEA----FVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~----~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
-|.+|..+.+.- ...+++.|+|...... .+.+ .|+|...+...+. ... ..+..
T Consensus 195 ~P~~P~~~~~~~-~~~~~~~l~w~~p~~~-~g~pi~~y~v~~~~~~~~~~~------~~~---------------~~~~~ 251 (389)
T 2jll_A 195 VPSSPYGVKIIE-LSQTTAKVSFNKPDSH-GGVPIHHYQVDVKEVASEIWK------IVR---------------SHGVQ 251 (389)
T ss_dssp CCCCCEEEEEEE-ECSSCEEEEEECCSCC-TTSCEEEEEEEEEETTCSCCE------EEE---------------CSTTC
T ss_pred CCCCCcceEEee-ccCCEEEEEEeCCCCC-CCcceEEEEEEEEECCCcccE------Eee---------------ccCCc
Confidence 345565554432 2357899999854221 1223 3555544332221 000 11223
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~ 280 (612)
....|++|+|++.|.|+|......|...+|....|+|.+.
T Consensus 252 ~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~ 291 (389)
T 2jll_A 252 TMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV 291 (389)
T ss_dssp SEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC
T ss_pred ceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC
Confidence 4567899999999999998764445556677888998664
No 190
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=88.80 E-value=8.5 Score=40.20 Aligned_cols=106 Identities=21% Similarity=0.280 Sum_probs=58.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC--------CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccC
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE--------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRD 236 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~--------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~ 236 (612)
-|.+|..+.+.... +.+.|+|........ -.-.|+|...+ ..+... . +.. .
T Consensus 108 ~p~pP~~l~v~~~~--~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~yr~~~-~~w~~~-~--~~~---------------~ 166 (419)
T 2gys_A 108 QPPEPRDLQISTDQ--DHFLLTWSVALGSPQSHWLSPGDLEFEVVYKRLQ-DSWEDA-A--ILL---------------S 166 (419)
T ss_dssp CCCCCEEEEEEEET--TEEEEEEECCC-----CCSCGGGEEEEEEEEETT-SCSTTC-E--EEE---------------E
T ss_pred cCCCCCceEEEecC--CeEEEEECCCccccccchhccCceEEEEEEccCC-CChhhe-e--eec---------------c
Confidence 56778877776544 599999998753210 01345555543 222111 0 000 0
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCC---CCc---cccceEEEEcCCCCCCCCCeEEEEE
Q 007233 237 PGYIHTSFLKELWPNAMYTYKVGHRLFN---STY---IWSSEYQFKASPYPGQNSLQRVVIF 292 (612)
Q Consensus 237 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~d---g~~---~~S~~~~F~T~p~~g~~~~~rf~v~ 292 (612)
....+.+.+.+|.|+++|..||...... +.+ .||+...|+|++.. ...+..+-.+
T Consensus 167 ~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~ 227 (419)
T 2gys_A 167 NTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECF 227 (419)
T ss_dssp SSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEE
T ss_pred cceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEE
Confidence 1122333344999999999999976421 223 45678899998754 2233344444
No 191
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=88.38 E-value=1.3 Score=43.35 Aligned_cols=93 Identities=18% Similarity=0.234 Sum_probs=54.5
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
-|.+|.-+.+.... .+.+.|+|........-.-.|+|....+..+.. ... .......
T Consensus 136 kP~PP~nl~v~~~~-~~~l~l~W~~P~~~~~L~Yevry~~~~~~~W~~----~~~------------------~~~~~~~ 192 (247)
T 2erj_C 136 IPWAPENLTLHKLS-ESQLELNWNNRFLNHCLEHLVQYRTDWDHSWTE----QSV------------------DYRHKFS 192 (247)
T ss_dssp ECCCCEEEEEEESS-SSCEEEEEECSSCCTTEEEEEEEECSSCSSCEE----EEE------------------CSSCEEE
T ss_pred EeCCCCeEEEEECC-CCcEEEEECCCCCCCcEEEEEEEeeCCCCCCEE----Eec------------------CCceEEE
Confidence 46778777766543 378999999864211112357776544433321 000 0113456
Q ss_pred ecCCCCCCEEEEEEeeecCCC---Cc---cccceEEEEcCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNS---TY---IWSSEYQFKASPY 280 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg---~~---~~S~~~~F~T~p~ 280 (612)
|.+|+|+++|..||......+ .+ .||+...|.|.+.
T Consensus 193 l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~~t~~~ 234 (247)
T 2erj_C 193 LPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNTS 234 (247)
T ss_dssp ESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCCEEECC---
T ss_pred ecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcCEEEECCCC
Confidence 799999999999999875321 22 4666678877543
No 192
>1iar_B Protein (interleukin-4 receptor alpha chain); cytokine receptor,interleukin-4, cytokine/receptor complex; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_B* 3bpn_B* 3bpo_B*
Probab=87.06 E-value=1.1 Score=42.59 Aligned_cols=97 Identities=14% Similarity=0.097 Sum_probs=48.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCC-C----CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCe
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGI-N----EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGY 239 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~-~----~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~ 239 (612)
-|.+|.-+.+.... .+...|+|...... . .-.-.|+|...+.... . ..... ...+.
T Consensus 97 kp~PP~nl~~~~~~-~~~l~l~W~~p~~~~~~~~~~L~yev~y~~~~~~~~-~----~~~~~-------------~~~~~ 157 (207)
T 1iar_B 97 KPRAPGNLTVHTNV-SDTLLLTWSNPYPPDNYLYNHLTYAVNIWSENDPAD-F----RIYNV-------------TYLEP 157 (207)
T ss_dssp CCCCCEEEEEC-----CCEEEEEECSSCTTSTTGGGCEEEEEEEESSSCSC-E----EEEEE-------------CSSCC
T ss_pred ccCCCCCeEEEEcc-CCCEEEEECCCCCccccccccEEEEEEEccCCCchh-h----eeeee-------------ecCCc
Confidence 56778777766433 46899999886421 0 1124566665432211 0 00000 01234
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCc---cccceEEEEcCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTY---IWSSEYQFKASPY 280 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~---~~S~~~~F~T~p~ 280 (612)
.....+.+|.||++|..||........+ .||+...|+|.+.
T Consensus 158 ~~~~~~~~L~p~~~Y~vqVR~k~~~~~G~WSeWS~~~~~~t~~~ 201 (207)
T 1iar_B 158 SLRIAASTLKSGISYRARVRAWAQAYNTTWSEWSPSTKWHNSYR 201 (207)
T ss_dssp EEEECC-----CCCEEEEEEEECGGGTCCCCCCCCCEEEC----
T ss_pred EEEEEHHHCCCCCEEEEEEEEecCCCCCCCCCCCcCeEEECCCC
Confidence 4556678999999999999987432222 4667789998754
No 193
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=87.04 E-value=3.7 Score=41.20 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=30.1
Q ss_pred EEEEecCCCCCCEEEEEEeeec--CCCCccccceEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRL--FNSTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~--~dg~~~~S~~~~F~T~p 279 (612)
...+|.+|+|+|.|..+|.... ..|.+.+|+...++|..
T Consensus 159 ~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 159 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp TEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred ceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 3578999999999999998543 23455678888888854
No 194
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=86.73 E-value=1.9 Score=48.74 Aligned_cols=133 Identities=11% Similarity=0.042 Sum_probs=67.0
Q ss_pred EEEEEeeccc--ceEEEEEeCCCCCcEEEEeecccccc----CCCCCcceeeecCCCCCcEEEEEEeCCCCC--CCccEE
Q 007233 129 LKLMLINQRS--DFSVALFSGGLLKPKLVAVSNKIAFT----NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN--EAEAFV 200 (612)
Q Consensus 129 ~~~~l~n~r~--~~~f~~f~~~~~~~~~~a~s~~~~~~----~~~~p~~~~La~~~~~~~m~V~W~t~~~~~--~~~~~V 200 (612)
..+.|-+++. .|.|++........ ..|..+.+. -|..|....+......++++|+|......+ -..-.|
T Consensus 422 ~~~~i~~L~p~t~Y~~~V~A~n~~G~---s~S~~~~~~T~~~~P~~p~~~~~~~~~~~~si~l~W~~P~~~~g~i~~Y~V 498 (731)
T 2v5y_A 422 PQHTITNLSPYTNVSVKLILMNPEGR---KESQELIVQTDEDLPGAVPTESIQGSTFEEKIFLQWREPTQTYGVITLYEI 498 (731)
T ss_dssp CEEEECSCCSSCEEEEEEEEECSSCE---EECCCEEEECCCCCCCCCCTTTCEEEEETTEEEEECCCCSCCSSCCCEEEE
T ss_pred ceEEECCCCCCCEEEEEEEEEcCCCC---CCCceEEEEccCCCCCCCCcceEEeeecCCeEEEEEcCCCCCCCCccceEE
Confidence 3455555554 57777665322211 124444432 233333234443334679999998653211 112345
Q ss_pred EEeecCCCC-c-cccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 201 QWGRKGGDR-T-HSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 201 ~yg~~~~~~-~-~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
+|...+... . .......+.. ..+.....+|+||+|+|.|.++|......|...+| ...|+|.
T Consensus 499 ~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s-~~~~~T~ 562 (731)
T 2v5y_A 499 TYKAVSSFDPEIDLSNQSGRVS---------------KLGNETHFLFFGLYPGTTYSFTIRASTAKGFGPPA-TNQFTTK 562 (731)
T ss_dssp EEEEEEECC---CCCCCEEEEE---------------EETTCCEEEECSCCTTEEEEEEEEEEETTEEEEEE-EEEEECC
T ss_pred EEEECcCCCccccccCcceEEe---------------ecCCcceEEecCCCCCCEEEEEEEEEeCCccCCCc-ccEEEcC
Confidence 665432211 0 0000000000 01223467899999999999999876544544555 3678887
Q ss_pred CC
Q 007233 279 PY 280 (612)
Q Consensus 279 p~ 280 (612)
+.
T Consensus 563 ~~ 564 (731)
T 2v5y_A 563 IS 564 (731)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 195
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=86.33 E-value=3.1 Score=39.85 Aligned_cols=35 Identities=3% Similarity=-0.068 Sum_probs=25.0
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
+++|+|++.|.|||.....-|.+.+|++..+.+++
T Consensus 167 ~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~~~ 201 (232)
T 4go6_B 167 HIDYTTKPAIIFRIAARNEKGYGPATQVRWLQETS 201 (232)
T ss_dssp CBEESSSEEEEEEEEEECSSCBCCCEEEEEECC--
T ss_pred eecCccCCceEEEEEEECCCcCCCCcccEEeccCC
Confidence 56899999999999876444555677776666554
No 196
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=85.79 E-value=7 Score=40.77 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=29.9
Q ss_pred EEEEecCCCCCCEEEEEEeeec--CCCCccccceEEEEcCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRL--FNSTYIWSSEYQFKASP 279 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~--~dg~~~~S~~~~F~T~p 279 (612)
...+|++|.|++.|..+|.... ..|.+.+|+...++|..
T Consensus 163 ~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~ 203 (414)
T 3se4_A 163 SRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 203 (414)
T ss_dssp SEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCS
T ss_pred cEEEEcCCCCCCeEEEEEEEEeccCCCCCccCccccccccc
Confidence 3577999999999999998753 13455678888888864
No 197
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=85.12 E-value=5.7 Score=44.66 Aligned_cols=53 Identities=11% Similarity=0.058 Sum_probs=35.7
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCC-CCCCCeEEEE
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYP-GQNSLQRVVI 291 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~-g~~~~~rf~v 291 (612)
+-....+|+||+|+|.|.++|......|.+.+ ....|+|++.+ +....+++..
T Consensus 591 ~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~~~~~T~~~~P~~P~~l~v~~ 644 (680)
T 1zlg_A 591 SDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TIKTFRTPELPPSSAHRSHLKH 644 (680)
T ss_pred CcccEEEecCCCCCceEEEEEEEEcCCCcCCC-cceEEECCCCCCCCCCCCeEEe
Confidence 34677899999999999999986544454444 66789987542 2222355543
No 198
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=83.89 E-value=4.3 Score=44.53 Aligned_cols=42 Identities=17% Similarity=0.030 Sum_probs=30.1
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCC---ccccceEEEEcCCCC
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNST---YIWSSEYQFKASPYP 281 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~---~~~S~~~~F~T~p~~ 281 (612)
...++|++|+|+|.|.+||......|. ..++....++|.+.+
T Consensus 399 ~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~ 443 (536)
T 3fl7_A 399 RTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTE 443 (536)
T ss_dssp SSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCC
T ss_pred cceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccC
Confidence 456789999999999999986532232 224667788887643
No 199
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=83.36 E-value=2.6 Score=39.59 Aligned_cols=39 Identities=23% Similarity=0.184 Sum_probs=31.1
Q ss_pred EEEecCCCCCCEEEEEEeeecC--CCCccccceEEEEcCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLF--NSTYIWSSEYQFKASPY 280 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~--dg~~~~S~~~~F~T~p~ 280 (612)
.++|++|+|+|.|..+|..... .+.+.||+...|+|.+.
T Consensus 156 ~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 156 FEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp EEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred eEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 4789999999999999986543 35567888899998763
No 200
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=82.89 E-value=4.1 Score=42.69 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=27.2
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCC--Cc---cccceEEEEc
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNS--TY---IWSSEYQFKA 277 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg--~~---~~S~~~~F~T 277 (612)
..+.|.+|+|||+|..||......| .+ .||+...|+|
T Consensus 377 ~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 377 HSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp SEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred cEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 3578999999999999999765432 23 4566677765
No 201
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=82.59 E-value=0.72 Score=36.96 Aligned_cols=39 Identities=18% Similarity=0.313 Sum_probs=26.5
Q ss_pred CCeEEEEEecCCCCCCEEEEEEeeecCCCCccccce--EEEEcC
Q 007233 237 PGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSE--YQFKAS 278 (612)
Q Consensus 237 ~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~--~~F~T~ 278 (612)
||-.+.-+|+||+||.+|.=++-+-...| -++. +.|+|-
T Consensus 34 Pgh~nSYtIsGLkPGvtYegQLisV~r~g---~~EvtrfdfTT~ 74 (89)
T 1q38_A 34 PGHLNSYTIKGLKPGVVYEGQLISIQQYG---HQEVTRFDFTTT 74 (89)
T ss_dssp CSSSSCCCCCCCCTTCCEEEEEEEECTTS---CCCEEEEEECSS
T ss_pred CCccceEEEeccCCCcEEEEEEEeeeecc---cCCceEEEEEec
Confidence 45556667999999999999988754322 2443 555553
No 202
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=81.68 E-value=2.1 Score=50.08 Aligned_cols=40 Identities=15% Similarity=0.061 Sum_probs=30.9
Q ss_pred EEEEecCCCCCCEEEEEEee-ecCCCC----ccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGH-RLFNST----YIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~-~~~dg~----~~~S~~~~F~T~p~ 280 (612)
...+|++|+|+|+|.|||.. ....|. ..+|+...|+|.+.
T Consensus 549 ~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~ 593 (897)
T 2dtg_E 549 PGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDAT 593 (897)
T ss_dssp CEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCC
T ss_pred cceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCC
Confidence 55789999999999999987 332343 46788888999763
No 203
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=81.46 E-value=2.7 Score=46.54 Aligned_cols=73 Identities=12% Similarity=0.159 Sum_probs=46.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCC----ccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEA----EAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~----~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
-|.+|..+.+.-. +.++++|+|..+... .+ .-.||+...++..|...+. . ++ .
T Consensus 9 ~P~pP~~P~v~~~-~~~sv~L~W~~P~~D-Ggs~I~~Y~vE~~~~~~~~W~~v~~-~-----------------~~--t- 65 (573)
T 3uto_A 9 EPEPPRFPIIENI-LDEAVILSWKPPALD-GGSLVTNYTIEKREAMGGSWSPCAK-S-----------------RY--T- 65 (573)
T ss_dssp CCCCCEEEEEEEE-CSSCEEEEEECCSCC-SSSCCCEEEEEEEESSSCCCEEEEE-E-----------------SS--S-
T ss_pred CCccCCCCEEEEe-eCCEEEEEECCCCcC-CCCcccEEEEEEEECCCCceEEecc-c-----------------cC--C-
Confidence 3566776654322 358999999976321 12 2456777766666643221 0 01 1
Q ss_pred EEEEecCCCCCCEEEEEEeee
Q 007233 241 HTSFLKELWPNAMYTYKVGHR 261 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~ 261 (612)
..+++||.||++|.|||...
T Consensus 66 -~~~V~~L~~g~~Y~FRV~A~ 85 (573)
T 3uto_A 66 -YTTIEGLRAGKQYEFRIIAE 85 (573)
T ss_dssp -EEEECCCCTTCEEEEEEEEE
T ss_pred -EEEeCCCCCCCcEeEEEEEE
Confidence 24689999999999999975
No 204
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=81.42 E-value=1.4 Score=42.33 Aligned_cols=38 Identities=21% Similarity=0.168 Sum_probs=28.2
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..++++|+|++.|.|||......|...+|....++|.+
T Consensus 47 ~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~ 84 (232)
T 4go6_B 47 QLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCL 84 (232)
T ss_dssp --CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCC
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecC
Confidence 45678999999999999876444555667777887754
No 205
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=80.84 E-value=0.89 Score=53.25 Aligned_cols=41 Identities=17% Similarity=0.299 Sum_probs=32.1
Q ss_pred EEEecCCCCCCEEEEEEeeecCCCCccccceEEEEcCCCCCC
Q 007233 242 TSFLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASPYPGQ 283 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p~~g~ 283 (612)
.++|++|+|| +|.+||......|.+.||+...|+|++.+..
T Consensus 852 ~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p~~ 892 (897)
T 2dtg_E 852 GCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYLDV 892 (897)
T ss_dssp CCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC--
T ss_pred cEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCCCC
Confidence 3478999999 6999998765566667899999999886543
No 206
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=74.38 E-value=5.6 Score=36.81 Aligned_cols=89 Identities=12% Similarity=0.043 Sum_probs=47.0
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
|.+|..+.... .+.++|+|+|....+.. ...-.|+|...++.. ..|.. ..+-...++
T Consensus 8 P~~P~~l~~~~-~~~~sv~l~W~~p~~~~~~~~Y~v~~~~~~~~~-------------~~~~~--------~~~~~~~~~ 65 (215)
T 1bqu_A 8 PEKPKNLSCIV-NEGKKMRCEWDGGRETHLETNFTLKSEWATHKF-------------ADCKA--------KRDTPTSCT 65 (215)
T ss_dssp CCCCEEEEEEE-ETTSCCEEEEECCSCCSSCCEEEEEEEETTEEC-------------CCEEC--------CSSCTTEEE
T ss_pred CCCCEeeEeEE-CCCCcEEEEcCCCCCCCCCceEEEEEEEcCCCc-------------ccccc--------ccCCcceEE
Confidence 44565555433 23578999999765321 112344444321100 01110 012234568
Q ss_pred ecCC-CCCCEEEEEEeeecCCCCccccceEEEEc
Q 007233 245 LKEL-WPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 245 ltgL-~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 277 (612)
|++| +|++.|.++|......|... +....|.+
T Consensus 66 i~~L~~~~t~Y~~~V~A~n~~G~~~-s~~~~~~~ 98 (215)
T 1bqu_A 66 VDYSTVYFVNIEVWVEAENALGKVT-SDHINFDP 98 (215)
T ss_dssp CSSCCCTTSCEEEEEEEEETTEEEE-CCCEEECG
T ss_pred EcCCccccccEEEEEEEEecccCcc-CCcEEecc
Confidence 9999 99999999998653223221 34455654
No 207
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=71.98 E-value=5.9 Score=43.05 Aligned_cols=80 Identities=13% Similarity=0.071 Sum_probs=42.7
Q ss_pred CCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCCCEEEEEEe
Q 007233 180 WNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPNAMYTYKVG 259 (612)
Q Consensus 180 ~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg 259 (612)
.++++|+|..... ....-.|+|...+..... ...... ......+..++++|+|++.|.++|.
T Consensus 413 ~~si~l~W~~p~~-~i~~Y~v~~~~~~~~~~~----~~~~~~-------------~~~~~~~~~~~~~L~p~t~Y~~~V~ 474 (589)
T 3l5h_A 413 DNMLWVEWTTPRE-SVKKYILEWCVLSDKAPC----ITDWQQ-------------EDGTVHRTYLRGNLAESKCYLITVT 474 (589)
T ss_dssp SSSEEEECCCCSS-CCSCBCCEEEEECSSSCC----CEEECC-------------BCSSCCEEECCSCCCSSSEEEEEEC
T ss_pred CCeEEEEEECCCC-CccEEEEEEEECCCCCCC----ccCcEE-------------eeCCcceEEehhccccCcEEEEEEE
Confidence 5899999987643 223456667654332100 000000 0011234456799999999999998
Q ss_pred eecCCCCccccceEEEEcC
Q 007233 260 HRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 260 ~~~~dg~~~~S~~~~F~T~ 278 (612)
.....|....+ .-.+.|.
T Consensus 475 A~~~~g~g~~~-~~~~~t~ 492 (589)
T 3l5h_A 475 PVYADGPGSPE-SIKAYLK 492 (589)
T ss_dssp BEETTEECCCE-EEEEESS
T ss_pred EEeCCcccCCE-EEEEEec
Confidence 65333332222 3345564
No 208
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=71.62 E-value=4.8 Score=38.52 Aligned_cols=40 Identities=23% Similarity=0.081 Sum_probs=32.3
Q ss_pred EEEEecCCCCCCEEEEEEeeecC--CCCccccceEEEEcCCC
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLF--NSTYIWSSEYQFKASPY 280 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~--dg~~~~S~~~~F~T~p~ 280 (612)
+.++|.+|+|+|.|..+|..... .+.+.||+...|+|.+.
T Consensus 173 ~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d 214 (221)
T 4doh_R 173 HTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKD 214 (221)
T ss_dssp SEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC
T ss_pred cEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCC
Confidence 35689999999999999986532 45667899999999764
No 209
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=69.67 E-value=6.3 Score=43.92 Aligned_cols=106 Identities=11% Similarity=0.135 Sum_probs=54.4
Q ss_pred CCCCCcceeee-cCCCCCcEEEEEEeCCCCCCCccEEEEeecCC-CCccccCcc-----------eEEecCCcCCCCccc
Q 007233 165 NPNAPVYPRLA-QGKTWNEMTVTWTSGYGINEAEAFVQWGRKGG-DRTHSPAGT-----------LTFDRGSMCGAPART 231 (612)
Q Consensus 165 ~~~~p~~~~La-~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~-~~~~~~~~~-----------~t~~~~~mcg~pa~~ 231 (612)
.|.+|..+.+. +..+.++++|.|.-+.. ......|..--. ......... ..|..++ +
T Consensus 34 ~~~~p~~~~~~t~~~~~~si~l~~~~p~~---~~~~~~y~vy~ng~~v~~~~~~~~~~~~~~~~~~~~~~~~-------~ 103 (608)
T 2uvf_A 34 SLDAPQQLQVPTLAYDESSIVLVWKAPED---TRKIVDYQIFSAGKLLGKASDNNDNFSPAKPYIDHFYVND-------K 103 (608)
T ss_dssp --CCCEEEECCTTCBCSSCEEEEEECCSC---CTTEEEEEEEETTEEEEEHHHHHHHHCSSHHHHHHHHHTC-------G
T ss_pred CCCCCCceEeeecccCCcEEEEEEeCCcc---ccccccEEEEECCEEeEeeccccccccccccccccccccc-------c
Confidence 45577666642 34467899999988754 334555653211 111100000 0111111 0
Q ss_pred eeccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCc-cccceEEEEcCCC
Q 007233 232 VGWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTY-IWSSEYQFKASPY 280 (612)
Q Consensus 232 ~g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~-~~S~~~~F~T~p~ 280 (612)
.++..--..|+.++++|+|+|+|.|+|.....+|.. .-++.-..+|.+.
T Consensus 104 ~~~~~~~~~~~~~v~~L~p~T~Y~~~v~a~d~~G~~s~ds~~V~~~T~~~ 153 (608)
T 2uvf_A 104 DNFQHKIVMQNFTVIGLKPETSYQFTVKAQYADGSLSVASKPITAKTSAK 153 (608)
T ss_dssp GGCSCCCCCCEEEECSCCTTCEEEEEEEEEETTSCBCCCCCCEEEECCCC
T ss_pred ccccceeeeeeEEecCCCCCCEEEEEEEEecCCCcccccchhcccccccC
Confidence 112111145778899999999999999874333321 1144555666553
No 210
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=68.35 E-value=1.8 Score=45.10 Aligned_cols=38 Identities=8% Similarity=0.183 Sum_probs=11.1
Q ss_pred EEecC-CCCCCEEEEEEeeecC-----CCC-ccccceEEEEcCCC
Q 007233 243 SFLKE-LWPNAMYTYKVGHRLF-----NST-YIWSSEYQFKASPY 280 (612)
Q Consensus 243 a~ltg-L~P~t~Y~Yrvg~~~~-----dg~-~~~S~~~~F~T~p~ 280 (612)
..|.+ |+|+++|.+||..... .|. ..||+...|+|+..
T Consensus 292 ~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~ 336 (380)
T 3lb6_C 292 TYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDL 336 (380)
T ss_dssp CC------------CCEEEEECTTTCSSCCCCCCCCC--------
T ss_pred EEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCC
Confidence 35788 9999999999987632 121 35677888998754
No 211
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=67.50 E-value=5.3 Score=37.67 Aligned_cols=84 Identities=12% Similarity=0.010 Sum_probs=48.6
Q ss_pred eeeecCCCCCcEEEEEEeCCCCCCCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEEecCCCCC
Q 007233 172 PRLAQGKTWNEMTVTWTSGYGINEAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSFLKELWPN 251 (612)
Q Consensus 172 ~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ltgL~P~ 251 (612)
+.|. .+.+++.|.|..... .-.-.|+|..++..... ....+. ..-..++|.+|+|+
T Consensus 115 v~v~--~~~~~i~V~~~~p~~--~l~Y~v~y~~~~~~~~~---~~~~~~-----------------~~~~~~~i~~L~p~ 170 (206)
T 4doh_B 115 MEIT--KDGFHLVIELEDLGP--QFEFLVAYWRREPGAEE---HVKMVR-----------------SGGIPVHLETMEPG 170 (206)
T ss_dssp EEEE--EETTEEEEEECCCCT--TCEEEEEEEESSSSCCC---EEEEEC-----------------CSSSEEEEEECCSS
T ss_pred EEEE--eCCCEEEEEecCCCC--cEEEEEEEEEcCCCcee---EEeEEc-----------------cCCeEEEEeCCCCC
Confidence 5554 457899999975421 12455677665433210 000010 01134689999999
Q ss_pred CEEEEEEeeecC--CCCccccceEEEEcCC
Q 007233 252 AMYTYKVGHRLF--NSTYIWSSEYQFKASP 279 (612)
Q Consensus 252 t~Y~Yrvg~~~~--dg~~~~S~~~~F~T~p 279 (612)
+.|..+|..... ++...+|+..-|.|..
T Consensus 171 t~Ycv~Vra~~~~~~~~g~~S~~~C~~t~~ 200 (206)
T 4doh_B 171 AAYCVKAQTFVKAIGRYSAFSQTECVEVQG 200 (206)
T ss_dssp SCEEEEEEEEEGGGTEECCCCCCEEECC--
T ss_pred CcEEEEEEEEecCCCCCCCCCCCEeEEccc
Confidence 999999985432 2445677777787753
No 212
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=65.97 E-value=14 Score=34.81 Aligned_cols=63 Identities=13% Similarity=0.113 Sum_probs=40.5
Q ss_pred CCeEEEecCcccceeecccccceeccCCCccccCCCCceEEEEeCCCCCCCCCCCCCCCCcceeeeCceeEEEEEEecCC
Q 007233 491 KVDIAIYGHVHNYERTCPIYQNICTNKEKNYYKGTLNGTIHVVAGGGGAGLAEFTPLQTTWSLYRDYDYGFVKLTAFDHS 570 (612)
Q Consensus 491 ~VdlvlsGH~H~YeR~~p~~~~~~~~~~~~~y~~~~~g~vyiv~G~gG~~l~~~~~~~~~ws~~~~~~~Gy~~l~v~n~~ 570 (612)
+.|++++||+|...... .+++++|-.|+.|.+.. ....+|..++. .
T Consensus 143 ~~d~vi~GHtH~~~~~~------------------~~~~~~iNpGs~~~pr~-------------~~~~sy~il~~---~ 188 (208)
T 1su1_A 143 QNDVLVYGHTHLPVAEQ------------------RGEIFHFNPGSVSIPKG-------------GNPASYGMLDN---D 188 (208)
T ss_dssp TTCEEECCSSCCCEEEE------------------ETTEEEEECCCSSCCCT-------------TCCCEEEEEET---T
T ss_pred CCCEEEECCcccCccEE------------------eCCEEEEECCCCcCCCC-------------CCCCEEEEEEC---C
Confidence 45999999999754321 13567777887664311 01246777763 3
Q ss_pred eEEEEEEECCCCcEEEEEEE
Q 007233 571 NLLFEYKKSSDGKVYDSFRI 590 (612)
Q Consensus 571 ~l~~~~~~~~dG~v~D~f~i 590 (612)
.++++ ..+|+++.+..|
T Consensus 189 --~~~~~-~~~~~~~~~~~~ 205 (208)
T 1su1_A 189 --VLSVI-ALNDQSIIAQVA 205 (208)
T ss_dssp --EEEEE-ETTTCCEEEEEE
T ss_pred --eEEEE-EeCCCEEEEEec
Confidence 45555 468889988887
No 213
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=64.16 E-value=40 Score=30.85 Aligned_cols=98 Identities=15% Similarity=0.091 Sum_probs=49.2
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
|.+|..+......+.+.|+++|..+.+.. ...-.|+|......-. ....... .|.. ........+.
T Consensus 5 P~~P~~l~c~~~~~~~~~~~~W~p~~~~~~~~~Y~l~~~~~~~~~~-~~~~~~~-----~~~~-------~~~~~~~~~~ 71 (215)
T 1cd9_B 5 PASPSNLSCLMHLTTNSLVCQWEPGPETHLPTSFILKSFRSRADCQ-YQGDTIP-----DCVA-------KKRQNNCSIP 71 (215)
T ss_dssp CCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCGGGC-SCCCEEE-----EEEC-------CTTCCEEEEE
T ss_pred CCCCeeeeeecCCCcccEEEEecCCCCCCCceeEEEEEEecCCccc-ccccccc-----cCCC-------CCCCcEEEEC
Confidence 34555444333334689999999865421 1123455553221100 0000000 0110 0012456678
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEc
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKA 277 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T 277 (612)
+.+|.|++.|.++|......|. ..|....|.+
T Consensus 72 ~~~L~~~~~Y~~~V~A~N~~G~-~~s~~~~~~~ 103 (215)
T 1cd9_B 72 RKNLLLYQYMAIWVQAENMLGS-SESPKLCLDP 103 (215)
T ss_dssp GGGCCTTSCEEEEEEEEETTEE-EECCCEEECG
T ss_pred CcccccceEEEEEEEEECCCCC-ccCccEEEch
Confidence 8999999999999986532222 2244566664
No 214
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=63.68 E-value=16 Score=35.43 Aligned_cols=83 Identities=12% Similarity=0.128 Sum_probs=45.3
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCCCccEEEEe----ecCCCCccccCcceEEecCCcCCCCccceeccCCCeE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINEAEAFVQWG----RKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYI 240 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~~~~~V~yg----~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~ 240 (612)
-|..|..+.+.. ...++++|+|..... ....+...|- ..+...+..... ...
T Consensus 198 ~P~~p~~~~~~~-~~~~~v~l~w~~p~~-~g~~~i~~y~v~~~~~~~~~w~~~~~----------------------~~~ 253 (305)
T 2nzi_A 198 VPDPPRGVKVSD-VSRDSVNLTWTEPAS-DGGSKITNYIVEKCATTAERWLRVGQ----------------------ARE 253 (305)
T ss_dssp CCCCCEEEEEES-CCSSCEEEEEECCSC-CSBSCEEEEEEEEEETTSCCEEEEEE----------------------ESS
T ss_pred CCCCCCCceeee-ccCCEEEEEEcCCcc-CCCCceeEEEEEEecCCCCccEECcc----------------------ccC
Confidence 455666665532 346899999986422 1223444443 222222211000 002
Q ss_pred EEEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 241 HTSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 241 h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
...+|++|+|++.|.|||.....-|...+|.
T Consensus 254 ~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~ 284 (305)
T 2nzi_A 254 TRYTVINLFGKTSYQFRVIAENKFGLSKPSE 284 (305)
T ss_dssp SEEEECSCCSSCEEEEEEEEEETTEECCCCC
T ss_pred ceEEecCCCCCCeEEEEEEEEeCCcccCCcC
Confidence 3467899999999999998763333333443
No 215
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=60.79 E-value=13 Score=36.54 Aligned_cols=75 Identities=12% Similarity=0.040 Sum_probs=42.2
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
-|.+|..++... .+.++|+++|..+.+.. ...-.|+|...+... ..|.. .++-...+
T Consensus 103 ~P~~P~~l~~~~-~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~-------------~~~~~--------~~~~~~~~ 160 (303)
T 1i1r_A 103 PPEKPKNLSCIV-NEGKKMRCEWDGGRETHLETNFTLKSEWATHKF-------------ADCKA--------KRDTPTSC 160 (303)
T ss_dssp CCCCCEEEEEEE-ETTSCCEEEEECCSCCSSCCEEEEEEEETTEEC-------------CCEEC--------CSSCTTEE
T ss_pred CCCCCeeeEEEE-CCCCcEEEEccCCCCCCCCcCEEEEEEecCCCC-------------ccCCC--------cCCCceEE
Confidence 355666665433 23478999999875421 112344444321100 01100 11223567
Q ss_pred EecCC-CCCCEEEEEEeee
Q 007233 244 FLKEL-WPNAMYTYKVGHR 261 (612)
Q Consensus 244 ~ltgL-~P~t~Y~Yrvg~~ 261 (612)
++++| +|++.|.+||...
T Consensus 161 ~i~~L~~p~t~Y~f~V~A~ 179 (303)
T 1i1r_A 161 TVDYSTVYFVNIEVWVEAE 179 (303)
T ss_dssp ECSSCCCTTSCEEEEEEEE
T ss_pred EECCcCcccccEEEEEEEE
Confidence 89999 9999999999865
No 216
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=57.68 E-value=18 Score=36.23 Aligned_cols=85 Identities=15% Similarity=0.087 Sum_probs=45.6
Q ss_pred cCCCCCcceeeecCCCCCcEEEEEEeCCCCCC------CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCC
Q 007233 164 TNPNAPVYPRLAQGKTWNEMTVTWTSGYGINE------AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDP 237 (612)
Q Consensus 164 ~~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~------~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~ 237 (612)
.-|.+|..+++......+.+.|+|..+...+. -.-.|+|...+...+... ... .
T Consensus 211 VkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~~~~~~~----~~~----------------~ 270 (306)
T 3d85_D 211 IKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDR----VFT----------------D 270 (306)
T ss_dssp BCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC------CE----EEE----------------S
T ss_pred EecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCCCccEEE----eec----------------c
Confidence 36788888888764446899999998643211 123677765443222110 000 0
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCccccceE
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSSEY 273 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~ 273 (612)
... ..| .+++.|..||......|.+.||+.-
T Consensus 271 ~ts--~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS 301 (306)
T 3d85_D 271 KTS--ATV---ICRKNASISVRAQDRYYSSSWSEWA 301 (306)
T ss_dssp SSE--EEE---CCCSSCEEEEEEEESSSCCCCCCCE
T ss_pred ccE--EEE---eCCCeEEEEEEeccCCCCCCCCCCC
Confidence 111 122 4699999999976544556687754
No 217
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=54.05 E-value=25 Score=37.65 Aligned_cols=78 Identities=10% Similarity=0.149 Sum_probs=49.2
Q ss_pred CCeEEEEEeecCCCCCCCCCcccccccchHHHHHHHHHhc---CCccEEEEeCcccccC------Cc----------hhH
Q 007233 285 SLQRVVIFGDMGKDEADGSNEYNDFQYASLNTTRQLIQDL---KNIDIVFHIGDICYAN------GY----------ISQ 345 (612)
Q Consensus 285 ~~~rf~v~GD~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~---~~pDfvl~~GDi~Y~~------g~----------~~~ 345 (612)
.++++++.+.......+ -.| .-+..+++.. .+||.+|++|.+++.. |. ..-
T Consensus 146 ~~l~ivvAsGPyT~sdn--l~y--------epL~~Ll~~v~~~~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~~~t 215 (460)
T 3flo_A 146 SSLKVIVTCGPYFANDN--FSL--------ELLQEFIDSINNEVKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQPKT 215 (460)
T ss_dssp SCEEEEEEESCCSCSSC--CCC--------HHHHHHHHHCCCCCCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSCCSS
T ss_pred CCcEEEEEeCCccCCCc--cCh--------HHHHHHHHHHHhccCCCEEEEecCcccccCcccccCcccccccccccccC
Confidence 46899999998765431 122 2244555432 3699999999998664 21 223
Q ss_pred HHHHHH-hhhhhh----cCCCeEEcCCCCccC
Q 007233 346 WDQFTA-QIEPIA----STVPYMIASGNHERD 372 (612)
Q Consensus 346 wd~f~~-~i~~l~----s~vP~~~v~GNHD~~ 372 (612)
++++|+ .+.++. ..+-++.+||+||..
T Consensus 216 ~~~lF~~~i~~il~~l~~~t~VVlVPS~rD~~ 247 (460)
T 3flo_A 216 LDELFLKLFTPILKTISPHIQTVLIPSTKDAI 247 (460)
T ss_dssp HHHHHHHHTHHHHTTSCTTSEEEEECCTTBTT
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEeCCccccc
Confidence 444443 344444 456689999999974
No 218
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=53.08 E-value=65 Score=29.33 Aligned_cols=94 Identities=15% Similarity=0.093 Sum_probs=49.9
Q ss_pred CCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEEE
Q 007233 166 PNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTSF 244 (612)
Q Consensus 166 ~~~p~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a~ 244 (612)
|.+|.-++. ...+.++|+++|..+.+.. +..-.|+|...+...+. .|.. ... .........
T Consensus 4 P~~P~nl~c-~~~~~~~~~c~W~p~~~~~~~~~Y~l~y~~~~~~~~~------------~c~~-~~~----~~~~~c~~~ 65 (210)
T 3n06_B 4 PGKPEIFKC-RSPNKETFTCWWRPGTDGGLPTNYSLTYHREGETLMH------------ECPD-YIT----GGPNSCHFG 65 (210)
T ss_dssp CCCCEEEEE-EBSSSSCEEEEEECCSSSCCCSEEEEEEEETTCCCCE------------ECSC-SST----TCTTEEEEC
T ss_pred CCCCeEeEE-EeCCCCeEEEEECCCCCCCCCceEEEEEEECCCCccc------------cCCC-CCC----CCCeEEEeC
Confidence 445555543 3345789999999875421 22345566543221110 1210 000 012345556
Q ss_pred ecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 245 LKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
+.+|.|.+.|.++|.....-|.. .|....|.+.
T Consensus 66 ~~~l~~~~~Y~~~V~A~N~~G~~-~s~~~~~~~~ 98 (210)
T 3n06_B 66 KQYTSMWRTYIMMVNATNQMGSS-FSDELYVDVT 98 (210)
T ss_dssp GGGCCSSSCEEEEEEEEETTEEE-ECCCEEECGG
T ss_pred CCCcccceeEEEEEEEEcCCCCe-eCCcEEEchh
Confidence 67899999999999865222222 2445567643
No 219
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=47.82 E-value=96 Score=31.85 Aligned_cols=37 Identities=22% Similarity=0.415 Sum_probs=29.6
Q ss_pred EEec-CCCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 243 SFLK-ELWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~lt-gL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..|+ +|.|++.|..||......|...||+...|+|..
T Consensus 269 ~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~ 306 (414)
T 3se4_A 269 CVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEI 306 (414)
T ss_dssp EEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEETTC
T ss_pred EcCCcccccCccEEEEEEEecCCCcccccccccccchh
Confidence 3444 699999999999987666777889888998764
No 220
>3b4n_A Endo-pectate lyase; pectin, galacturonic acid, right-handed parallel beta helix fold; 1.45A {Erwinia chrysanthemi} PDB: 3b8y_A* 3b90_A
Probab=46.56 E-value=32 Score=34.91 Aligned_cols=21 Identities=19% Similarity=-0.046 Sum_probs=16.7
Q ss_pred ecCCCCCCEEEEEEeeecCCC
Q 007233 245 LKELWPNAMYTYKVGHRLFNS 265 (612)
Q Consensus 245 ltgL~P~t~Y~Yrvg~~~~dg 265 (612)
=++|.+|+.|||.|.....++
T Consensus 75 Dt~~~~GttYyYwVk~~~~ng 95 (344)
T 3b4n_A 75 DADTNSGLNYWYWVDVVSENQ 95 (344)
T ss_dssp ECCCCTTCCCEEEEEEEETTC
T ss_pred ecCcCCCcEEEEEEEEecCCC
Confidence 378999999999998764333
No 221
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=46.08 E-value=49 Score=37.36 Aligned_cols=39 Identities=18% Similarity=0.181 Sum_probs=27.1
Q ss_pred CeEEEEEecCCCCCCEEEEEEeeecCCCCccccc---eEEEEcCC
Q 007233 238 GYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS---EYQFKASP 279 (612)
Q Consensus 238 g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~---~~~F~T~p 279 (612)
+-.+.|..++|.||+ |.++|.... ....|++ ..+|+-.|
T Consensus 741 ~~~~~~~ytnL~pG~-Y~f~V~a~n--~~g~w~~~~~~l~i~I~P 782 (795)
T 4a2l_A 741 TDSRTVSYSNLPQGT-YQFLVKAAN--SDGKWNPIPTALEIIVLP 782 (795)
T ss_dssp SSCCEEEEECCCSEE-EEEEEEEEC--TTSCBCSSCEEEEEEECC
T ss_pred CCcCeEEecccCCCe-EEEEEEEEC--CCCccCCCceEEEEEEEC
Confidence 345678999999986 999998763 3346864 35566554
No 222
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=45.25 E-value=8.5 Score=36.44 Aligned_cols=16 Identities=25% Similarity=0.355 Sum_probs=13.2
Q ss_pred hcCCeEEEecCcccce
Q 007233 489 KYKVDIAIYGHVHNYE 504 (612)
Q Consensus 489 k~~VdlvlsGH~H~Ye 504 (612)
..+++++++||+|...
T Consensus 176 ~~~~~~vv~GHth~~~ 191 (221)
T 1g5b_A 176 IKGADTFIFGHTPAVK 191 (221)
T ss_dssp CBTSSEEEECSSCCSS
T ss_pred ccCCCEEEECCCCCcc
Confidence 3578999999999853
No 223
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=44.40 E-value=2.1e+02 Score=29.13 Aligned_cols=28 Identities=11% Similarity=0.184 Sum_probs=20.8
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCC
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYG 192 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~ 192 (612)
-|.+|.-+.+.-....++|.|+|..+.+
T Consensus 31 ~~~pP~nl~v~~~~~~~~v~LsW~p~~~ 58 (380)
T 3lb6_C 31 KVNPPQDFEIVDPGYLGYLYLQWQPPLS 58 (380)
T ss_dssp CCCCCEEEEEECCSSSSEEEEEEECCCC
T ss_pred cCCcCCceEEEecCcCceEEEEECCCCC
Confidence 3677888877644446899999998754
No 224
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=35.78 E-value=1.6e+02 Score=28.93 Aligned_cols=37 Identities=22% Similarity=0.422 Sum_probs=25.9
Q ss_pred EEecC-CCCCCEEEEEEeeecCCCCccccceEEEEcCC
Q 007233 243 SFLKE-LWPNAMYTYKVGHRLFNSTYIWSSEYQFKASP 279 (612)
Q Consensus 243 a~ltg-L~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~p 279 (612)
..+++ |.+...|..||.....+|...||+...|.|..
T Consensus 265 c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s~~~~~~~~~ 302 (306)
T 3s98_A 265 CVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEI 302 (306)
T ss_dssp EEEEGGGSCSSEEEEEEEEECSSCBCCCCCCEEEEC--
T ss_pred ccCchhhcccCCEEEEEEEccCCCccccccccccCccc
Confidence 44555 34555999999976556667899999999864
No 225
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=34.51 E-value=3.2e+02 Score=26.26 Aligned_cols=100 Identities=13% Similarity=0.048 Sum_probs=48.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCC-CCccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEEEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGIN-EAEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIHTS 243 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~-~~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h~a 243 (612)
-|.+|..+........++|+++|..+.+.. +..-.|+|......-. ....... .|... .......+
T Consensus 98 ~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~-~~~~~~~-----~~~~~-------~~~~~~~~ 164 (313)
T 2d9q_B 98 PPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQ-TQGDSIL-----DCVPK-------DGQSHCSI 164 (313)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSC-SCCCCEE-----EECCC-------TTCSEEEE
T ss_pred CCCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcc-cCCcccc-----cCCCC-------CCCcEEEE
Confidence 345666665433334689999999875421 1123455543321100 0000000 01100 01133445
Q ss_pred EecCCCCCCEEEEEEeeecCCCCccccceEEEEcC
Q 007233 244 FLKELWPNAMYTYKVGHRLFNSTYIWSSEYQFKAS 278 (612)
Q Consensus 244 ~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~~~~F~T~ 278 (612)
..++|.|.+.|.+||.....-|. ..|....|.+.
T Consensus 165 ~~~~L~~~~~Y~f~V~A~N~~G~-~~s~~~~~~~~ 198 (313)
T 2d9q_B 165 PRKHLLLYQNMGIWVQAENALGT-SMSPQLCLDPM 198 (313)
T ss_dssp EGGGCCSSSCEEEEEEEEETTEE-EECCCEEECGG
T ss_pred CccccccceeEEEEEEEECCCCC-ccCccEEEehh
Confidence 55779999999999976522222 12344556554
No 226
>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C
Probab=33.91 E-value=74 Score=31.93 Aligned_cols=72 Identities=10% Similarity=0.032 Sum_probs=40.7
Q ss_pred CCCCCcceeeecCCCCCcEEEEEEeCCCCCC---CccEEEEeecCCCCccccCcceEEecCCcCCCCccceeccCCCeEE
Q 007233 165 NPNAPVYPRLAQGKTWNEMTVTWTSGYGINE---AEAFVQWGRKGGDRTHSPAGTLTFDRGSMCGAPARTVGWRDPGYIH 241 (612)
Q Consensus 165 ~~~~p~~~~La~~~~~~~m~V~W~t~~~~~~---~~~~V~yg~~~~~~~~~~~~~~t~~~~~mcg~pa~~~g~~~~g~~h 241 (612)
-|.+|..+.+.... +.+.|+|......-. -.-.|+|.......... .... ...+
T Consensus 220 kp~PP~nL~v~~~~--~~l~v~W~~P~~~~~~~~L~Yevryr~~~~~~~~~----~~~~-----------------~~~~ 276 (317)
T 3qt2_A 220 QINPPLNVTAEIEG--TRMSIQWEKPVSAFPIHCFDYEVKIHNTRNGYLQI----EKLM-----------------TNAF 276 (317)
T ss_dssp CCCCCEEEEEEEET--TEEEEEEECCSSSSCGGGEEEEEEEEETTTCCEEE----EEES-----------------SSEE
T ss_pred cCCCCceeEEEEeC--CcEEEEECCCCcccccCceEEEEEEEeCCCCcceE----EEEe-----------------eeEE
Confidence 67788777776543 699999998642111 12345555432211100 0000 0111
Q ss_pred EEEecCCCCCCEEEEEEeeec
Q 007233 242 TSFLKELWPNAMYTYKVGHRL 262 (612)
Q Consensus 242 ~a~ltgL~P~t~Y~Yrvg~~~ 262 (612)
.+ .|.|+++|..||....
T Consensus 277 --~l-~l~p~~~Y~vqVR~k~ 294 (317)
T 3qt2_A 277 --IS-IIDDLSKYDVQVRAAV 294 (317)
T ss_dssp --EE-ECCTTCCEEEEEEEEE
T ss_pred --Ee-ecCCCCEEEEEEEEee
Confidence 34 4999999999999874
No 227
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=26.88 E-value=1.4e+02 Score=33.39 Aligned_cols=29 Identities=14% Similarity=-0.038 Sum_probs=22.0
Q ss_pred EEEEEecCCCCCCEEEEEEeeecCCCCccccc
Q 007233 240 IHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS 271 (612)
Q Consensus 240 ~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~ 271 (612)
.++|..++|.||+ |.++|.... ....|++
T Consensus 709 ~~~~~ytnL~pG~-Y~f~V~a~~--~~g~w~~ 737 (758)
T 3ott_A 709 INRITYSNLSYGN-YQLIISKLE--RDGQPSN 737 (758)
T ss_dssp CCEEEECSCCSEE-EEEEEEEBC--TTSCBCS
T ss_pred cceEEecCCCCcc-EEEEEEEeC--CCCCccC
Confidence 4678999999986 999998763 3346875
No 228
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=24.02 E-value=67 Score=36.16 Aligned_cols=44 Identities=23% Similarity=0.480 Sum_probs=30.0
Q ss_pred eccCCCeEEEEEecCCCCCCEEEEEEeeecCCCCccccc---eEEEEcCC
Q 007233 233 GWRDPGYIHTSFLKELWPNAMYTYKVGHRLFNSTYIWSS---EYQFKASP 279 (612)
Q Consensus 233 g~~~~g~~h~a~ltgL~P~t~Y~Yrvg~~~~dg~~~~S~---~~~F~T~p 279 (612)
.|...+-.+.|..++|.||+ |.++|.....+ ..|++ ...|+-.|
T Consensus 730 ~W~~~~~~~~~~ytnL~pG~-Y~f~V~a~~~~--g~w~~~~~~l~i~I~p 776 (781)
T 3v9f_A 730 SWYTINEQNSVTFRNIPPGK-YEFLVKARLHN--QDWSEDTTSLRIHINP 776 (781)
T ss_dssp EEEEESSCSEEEECSCCSEE-EEEEEEEEETT--SCCCSCCEEEEEEECC
T ss_pred CccCcCCcceEEEcCCCCce-EEEEEEEECCC--CccCCCceEEEEEEcC
Confidence 45554555779999999986 99999876433 45764 35565544
No 229
>1noa_A Neocarzinostatin; antibacterial protein; 1.50A {Streptomyces carzinostaticus} SCOP: b.1.7.1 PDB: 1nco_A 1o5p_A* 1j5h_A 1j5i_A* 2g0k_A 2g0l_A* 2cbq_A* 2cbo_A* 2cbm_A* 2cbt_A*
Probab=20.69 E-value=88 Score=26.58 Aligned_cols=35 Identities=9% Similarity=-0.023 Sum_probs=26.7
Q ss_pred CceEEEccceecccCccccEEEEEEeCCCCCCCCEEEE
Q 007233 44 NAYVKASPAVVGLKGQNSEWVTVEYSSPNPSVDDWIAV 81 (612)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~d~~~~ 81 (612)
++.|++||..= ..|++.|+|+.+|-.|...=.++.
T Consensus 2 ap~isvsPatg---L~DGq~VtV~~tGl~p~~~y~v~~ 36 (113)
T 1noa_A 2 APTATVTPSSG---LSDGTVVKVAGAGLQAGTAYDVGQ 36 (113)
T ss_dssp CCEEEEESCSS---CCTTCEEEEEEESCCTTCEEEEEE
T ss_pred CCcEEecCCCC---CCCCCEEEEEEEccCCCCeEEEEE
Confidence 56899999763 346788999999988887655554
Done!