Query 007236
Match_columns 611
No_of_seqs 154 out of 704
Neff 5.8
Searched_HMMs 29240
Date Mon Mar 25 20:40:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/007236.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/007236hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ksi_A Copper amine oxidase; P 100.0 2E-166 5E-171 1394.4 64.2 578 27-611 2-579 (642)
2 3sxx_A Peroxisomal primary ami 100.0 6E-165 2E-169 1380.6 64.5 564 25-609 20-602 (692)
3 3loy_A Copper amine oxidase; T 100.0 3E-162 1E-166 1351.0 63.1 558 27-611 1-577 (633)
4 1w6g_A Phenylethylamine oxidas 100.0 1E-160 4E-165 1345.0 58.1 559 24-611 4-571 (646)
5 1spu_A Copper amine oxidase; o 100.0 2E-156 6E-161 1332.6 64.0 572 22-611 88-670 (727)
6 1tu5_A Copper amine oxidase, l 100.0 2E-140 8E-145 1194.0 51.4 554 25-609 38-647 (746)
7 1w7c_A Lysyl oxidase; AMNE oxi 100.0 6E-140 2E-144 1189.3 54.2 546 25-609 16-634 (747)
8 3hi7_A Amiloride-sensitive ami 100.0 4E-133 2E-137 1129.4 58.4 556 28-611 11-636 (731)
9 3pgb_A Putative uncharacterize 100.0 2E-130 7E-135 1108.9 58.2 557 24-609 62-678 (797)
10 2cs7_A Pneumococcal histidine 21.9 32 0.0011 26.6 1.2 18 29-46 37-54 (55)
No 1
>1ksi_A Copper amine oxidase; PEA seedling, oxidoreductase; HET: TPQ NAG; 2.20A {Pisum sativum} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w2z_A*
Probab=100.00 E-value=1.6e-166 Score=1394.43 Aligned_cols=578 Identities=53% Similarity=0.995 Sum_probs=539.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCcEEEEEEEeCCeeEEEEEeCC
Q 007236 27 YHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHELIVDLS 106 (611)
Q Consensus 27 ~HPldpLs~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vl~~l~~~~~~~p~R~A~vv~~~~~~~~E~vV~L~ 106 (611)
+|||||||++||++|++||+++.+. +..+++|++|+|.||+|++|++||+..++++|+|+|+|+++++++.+|++|+|+
T Consensus 2 ~HPldpLs~~Ei~~a~~iv~~~~~~-~~~~~~F~~i~L~EP~K~~v~~~l~~~~~~~P~R~A~vv~~~~~~~~E~vV~L~ 80 (642)
T 1ksi_A 2 QHPLDPLTKEEFLAVQTIVQNKYPI-SNNRLAFHYIGLDDPEKDHVLRYETHPTLVSIPRKIFVVAIINSQTHEILINLR 80 (642)
T ss_dssp CSTTCCCCHHHHHHHHHHHHHHSCT-TTCCEEEEEEEECCCCHHHHHHHHHCGGGCCCCCEEEEEEEETTEEEEEEEETT
T ss_pred CCCCCCCCHHHHHHHHHHHHhcccC-CCCceEEEEEECCCCCHHHHHHHHhhcCCCCCCcEEEEEEEeCCeEEEEEEECC
Confidence 5999999999999999999998763 235789999999999999999998543346789999999999999999999999
Q ss_pred CCeEEEEEeeCCCCCCCCCHHHHHHHHHHhhcCchHHHHHHHhCCCCcceEEccccccccCCccccCCCCceEEEEEEEE
Q 007236 107 LQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGLKLEEVVCESFSVGWYGAEEEEGKNKKRIVKVMCYY 186 (611)
Q Consensus 107 ~~~v~~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~~~~~v~~~~~~~G~~~~~~~~~~~~~Rl~~~~~f~ 186 (611)
.+++++++..+..+||+++.||+.+++++++++|.|+++|+++|+++.+|.|+||++||++.. + ++|++|++||+
T Consensus 81 ~~~v~~~~~~~~~g~p~~~~~E~~~~e~~~~~~p~~~~~~~~~gl~~~~v~~~pw~~g~~~~~--~---~~Rl~~~~~~~ 155 (642)
T 1ksi_A 81 IRSIVSDNIHNGYGFPILSVDEQSLAIKLPLKYPPFIDSVKKRGLNLSEIVCSSFTMGWFGEE--K---NVRTVRLDCFM 155 (642)
T ss_dssp TTEEEEEEECCSSCBCCCCHHHHHHHTTGGGGCHHHHHHHHHTTCCGGGEEEEEECCCCCSCS--C---CCCEEEEEEEE
T ss_pred CCcEEEEEeccCCCcCCCCHHHHHHHHHHhhcCHHHHHHHHhcCCCccceEEecccccCCCCC--C---CcEEEEEEEEE
Confidence 999988666665569999999999999999999999999999999989999999999987742 2 57999999999
Q ss_pred ecCCCCCccCCcCCcEEEEecCccEEEEEECCceeecCCCCCCCCccccCCCCCCCCCCCceeeCCCCCeeEEeceEEee
Q 007236 187 MNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTIDGHMIRW 266 (611)
Q Consensus 187 ~~~~~n~Ya~Pl~gl~~~vD~~~~kvv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~sf~v~g~~V~w 266 (611)
+.+++|+|+||||||+++||+++|||++|+|.+.+++|+.++.+|.++.+.+++|+++|||+|+||||+||+|+|++|+|
T Consensus 156 ~~~~~n~Ya~Pl~Gl~~vvD~~~~~V~~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkP~~i~QPeG~sF~V~G~~V~W 235 (642)
T 1ksi_A 156 KESTVNIYVRPITGITIVADLDLMKIVEYHDRDIEAVPTAENTEYQVSKQSPPFGPKQHSLTSHQPQGPGFQINGHSVSW 235 (642)
T ss_dssp CSSCSCGGGSEECSEEEEEETTTTEEEEEEECCCCCCCCCTTCCCCSTTCCSCCCCCCCCBEEECTTCCSCEEETTEEEE
T ss_pred ecCCCcccccccCceEEEEECCCCEEEEEEccCCccCCCCCCCCccccccCCCCCCCCCCceecCCCCCCEEEeCcEEee
Confidence 98889999999999999999999999999988777788776778998877667799999999999999999999999999
Q ss_pred eeeEEEEeecCCCceeEEeeEEeccCCCceeEEEEEeeeeeEeeeCCCCCccccccceeecCCCCCCccccCCCCCCCCC
Q 007236 267 ADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCP 346 (611)
Q Consensus 267 ~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~v~Yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCp 346 (611)
|||+||||||+|||||||||+|+|.+++++|||+||+|||||+||||||+++|++|+|||+||||+|.+||+|++|||||
T Consensus 236 ~~W~f~vgf~~reGlvL~dv~y~d~~~g~~r~V~YrlSl~Em~VPYgdP~~~~~~k~~fD~GeyG~G~~a~~L~~GcDCp 315 (642)
T 1ksi_A 236 ANWKFHIGFDVRAGIVISLASIYDLEKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDSGEFGFGLSTVSLIPNRDCP 315 (642)
T ss_dssp TTEEEEEEEETTTEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEBCCCSTTTTTCEECHHHHHCTTTTBCCCCBTTTBC
T ss_pred CCceEEEecCCCcccEEEEEEEecCCCCCceEEEEEeeeeeEEEeCCCCCcccccceeeeccccCccccccccccCCCCC
Confidence 99999999999999999999999988888999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEeeeEEecCCCCeeeeCceEEEeEEeCCCceeecccCCCCCcEEEeeeeceeEEEEEeeeecccceeEEEEEeeCc
Q 007236 347 PNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSG 426 (611)
Q Consensus 347 g~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~w~F~~dG 426 (611)
|+|+|||+++.+++|+|++++|||||||+| +||||||+|+++++..++.+|++++||||+|+|||||||||||+|||||
T Consensus 316 g~i~Y~D~~~~~~~G~p~~~~naiCihE~d-~gilwkH~~~r~~~~~~~~v~r~r~LVvr~i~TV~NYdYif~w~F~qdG 394 (642)
T 1ksi_A 316 PHAQFIDTYVHSANGTPILLKNAICVFEQY-GNIMWRHTENGIPNESIEESRTEVNLIVRTIVTVGNADNVIDWEFKASG 394 (642)
T ss_dssp TTCEEEEEEEECTTCCEEEEEEEEEEEEEE-EEEEEEEEECCSTTCCEEEEEEEEEEEEEEEEEETTEEEEEEEEECTTS
T ss_pred CCCEEeeeEEecCCCCEEEcCCEEEEEecc-CCcceeeccccCCCceeeeeeeccEEEEEEEEeecccceEEEEEEecCc
Confidence 999999999999999999999999999999 9999999999987655566777779999999999999999999999999
Q ss_pred cEEEEEeEeEeEEeeeeeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEeEEEeecCCCCCCCc
Q 007236 427 SIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRK 506 (611)
Q Consensus 427 tIe~~v~aTG~l~~~~~~~~~~~~~~~~~yGt~V~~~~~g~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~ 506 (611)
+||+||+|||||+|+++++.+.++.++.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+.++||++
T Consensus 395 ~Ie~ev~aTGil~t~~~~~~~~~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~~~~~~~~~~~~np~~ 474 (642)
T 1ksi_A 395 SIKPSIALSGILEIKGTNIKHKDEIKEDLHGKLVSANSIGIYHDHFYIYYLDFDIDGTHNSFEKTSLKTVRIKDGSSKRK 474 (642)
T ss_dssp CEEEEEEEEECCCEEECSCCSGGGCCSCCSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEEEECCSSCSSCS
T ss_pred eEEEEEEEEEEEEecccccccccccccCCCcceecCCcccccceEEEEEeeccCCCCCCCeEEEEeeEecCCCCCCCCCc
Confidence 99999999999999888654322222468999999999999999999999999999999999999999999877799999
Q ss_pred eeeEEEEEeecchhhHHhhcCCCCcEEEEecCCCCCCCCCcceEEEecCCccccCCCCCChhhhcccccccceEEeccCC
Q 007236 507 SYWTVDSKTAKTESDARIKLGSEPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNK 586 (611)
Q Consensus 507 ~~~~~~~~~~~tE~~a~~~~~~~~r~~~i~N~~~~N~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~ 586 (611)
++|++++++++||++|++++++.+|+|+|+|++++|++|+|+||||+|+++++++++++|+..+||+||+|+||||||+|
T Consensus 475 ~~~~~~~t~~~tE~ea~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~Ra~fa~~~lwVT~y~d 554 (642)
T 1ksi_A 475 SYWTTETQTAKTESDAKITIGLAPAELVVVNPNIKTAVGNEVGYRLIPAIPAHPLLTEDDYPQIRGAFTNYNVWVTAYNR 554 (642)
T ss_dssp EEEEEEEEECCBGGGGCBCTTSSCEEEEEEEEEEECTTSCEEEEEEECCSCCCCCSCTTSHHHHHTGGGGCSEEEEECCT
T ss_pred ceEEEEEEEccchhhhhhccCCCceEEEEEcCCCcCCCCCeeeEEEccCCcccccCCCcchhhhhhhccccceEEecCCC
Confidence 99999999999999999999989999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCChhhhccC
Q 007236 587 SEKWAGGLYADQSHGDDTLAVWSNR 611 (611)
Q Consensus 587 ~E~~asg~y~~qs~g~~gl~~w~~r 611 (611)
+|+||||+|+|||.|++||++|+++
T Consensus 555 ~E~~a~g~y~~qs~~~~gl~~~~~~ 579 (642)
T 1ksi_A 555 TEKWAGGLYVDHSRGDDTLAVWTKQ 579 (642)
T ss_dssp TCCCTTCSCCBTCCSSSSHHHHGGG
T ss_pred CccCCCCCCccCCCCCCChhhhhhC
Confidence 9999999999999999999999863
No 2
>3sxx_A Peroxisomal primary amine oxidase; oxidoreductase, peroxisome; HET: GOL; 1.27A {Pichia angusta} PDB: 3sx1_A* 3t0u_A 3n9h_A* 3nbj_A* 3nbb_A* 2oqe_C* 2oov_C* 2oqe_A* 2oov_A* 1ekm_A 1a2v_A*
Probab=100.00 E-value=5.7e-165 Score=1380.56 Aligned_cols=564 Identities=26% Similarity=0.429 Sum_probs=526.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCcEEEEEEEe--CCeeEEEE
Q 007236 25 HQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARI--DHQTHELI 102 (611)
Q Consensus 25 ~~~HPldpLs~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vl~~l~~~~~~~p~R~A~vv~~~--~~~~~E~v 102 (611)
..+|||||||++||++|++||+++.++ ++++|++|+|.||+|++|++||++. +++|+|+|+|+++. +++++|++
T Consensus 20 ~~~HPLDpLs~~Ei~~a~~iv~~~~~~---~~~~F~~i~L~EP~K~~v~~~~~~~-~~~p~R~a~v~~~~~~~~~~~e~v 95 (692)
T 3sxx_A 20 RPAHPLDPLSTAEIKAATNTVKSYFAG---KKISFNTVTLREPARKAYIQWKEQG-GPLPPRLAYYVILEAGKPGVKEGL 95 (692)
T ss_dssp CCSSTTSCCCHHHHHHHHHHHHHHTTT---SCEEEEEEEEECCCHHHHHHHHHSC-CCCCCCEEEEEEEETTCSSEEEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCC---CCcEEEEEECCCCCHHHHHHHHhcC-CCCCCeEEEEEEEECCCCCEEEEE
Confidence 346999999999999999999998765 6899999999999999999999885 46789999999998 67899999
Q ss_pred EeCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHhhcCchHHHHHHHhCC---CCcceEEccccccccCCccccCCCCceE
Q 007236 103 VDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGL---KLEEVVCESFSVGWYGAEEEEGKNKKRI 179 (611)
Q Consensus 103 V~L~~~~v~~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~---~~~~v~~~~~~~G~~~~~~~~~~~~~Rl 179 (611)
|||++++|++++.+++ .||+++.||+.+||++|++||+|+++|+|+|| +++.|.||||++||++.. +. ++||
T Consensus 96 Vdl~~~~v~~~~~~~~-~~p~~~~ee~~~~e~~~~~~p~~~~a~~~rgl~~~~~~~V~~dpw~~G~~~~~-~~---~~Rl 170 (692)
T 3sxx_A 96 VDLASLSVIETRALET-VQPILTVEDLCSTEEVIRNDPAVIEQCVLSGIPANEMHKVYCDPWTIGYDERW-GT---GKRL 170 (692)
T ss_dssp EETTTTEEEEEEEETT-CCCCCCHHHHHTHHHHHHHCHHHHHHHHHTTCCGGGGGGEEEEEEECCCCTTT-TT---SSCE
T ss_pred EECCCCeEEEEEECCC-CcCCcCHHHHHHHHHHHHhCHHHHHHHHHcCCCccccceEEEccccccccCCC-CC---CceE
Confidence 9999999999999986 58999999999999999999999999999999 456799999999987743 22 6899
Q ss_pred EEEEEEEec-CCCCCccCCcCCcEEEEecCccEEEEEECCce-eecCCCCCCCCccccCC--CCCCC-CCCCceeeCCCC
Q 007236 180 VKVMCYYMN-GTVNLFMRPIEGISMTVDLDEMKIIGFQDRVT-VPVPKADETEFRESKIK--PPFRQ-SLKAITVVQPDG 254 (611)
Q Consensus 180 ~~~~~f~~~-~~~n~Ya~Pl~gl~~~vD~~~~kvv~i~d~~~-~~~p~~~~~~y~~~~~~--~~~r~-~lkp~~i~QPeG 254 (611)
+|++||+|. +++|+|||||| |+++||++++||++|++... .|+|+.+..+|.++.+. +++|+ ++|||+|+||||
T Consensus 171 ~~~~~y~r~~~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~~~p~~~~~~~~Y~p~~~~~~~~~r~~d~kP~~i~QPeG 249 (692)
T 3sxx_A 171 QQALVYYRSDEDDSQYSHPLD-FCPIVDTEEKKVIFIDIPNRRRKVSKHKHANFYPKHMIEKVGAMRPEAPPINVTQPEG 249 (692)
T ss_dssp EEEEEEECSSTTSCGGGCBCS-CEEEEETTTTEEEEEECCSSCCCCCCSCCCCCSHHHHHHHHSSCCCCCCCCEEECTTC
T ss_pred EEEEEEEecCCCCCcccccce-eEEEEECCCCEEEEEecCCCCCCCCCCCCCCCChHHccccCCCCCCCCCCceecCCCC
Confidence 999999996 58999999999 99999999999999998765 56777677899987764 46788 999999999999
Q ss_pred CeeEEeceEEeeeeeEEEEeecCCCceeEEeeEEeccCCCceeEEEEEeeeeeEeeeCCCCCccccccceeecCCCCCCc
Q 007236 255 PSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGL 334 (611)
Q Consensus 255 ~sf~v~g~~V~w~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~v~Yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~ 334 (611)
+||+|+|++|+||||+||||||+|||||||||+|+| +|+.|||+||+|||||+||||||+++|+||+|||+||||+|.
T Consensus 250 ~sF~v~g~~V~W~~W~F~vgf~~reGlvL~dV~y~~--~g~~R~V~YrlSl~Em~VPYgdp~~p~~~k~afD~GeyG~G~ 327 (692)
T 3sxx_A 250 VSFKMTGNVMEWSNFKFHIGFNYREGIVLSDVSYND--HGNVRPIFHRISLSEMIVPYGSPEFPHQRKHALDIGEYGAGY 327 (692)
T ss_dssp CSCEEETTEEEETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCSTTGGGCEECHHHHTCTTT
T ss_pred CcEEEcCCeEEecCcEEEEecCCCCceEEEEEEEcC--CCcceeeeeeeehheeEEecCCCCchhhhheeeeccccCCCc
Confidence 999999999999999999999999999999999999 678899999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCCCCcEEeeeEEecCCCCeeeeCceEEEeEEeCCCceeecccCCCC--CcEEEeeeeceeEEEEEeeeec
Q 007236 335 CSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIP--GKTVREVRQDVSLVVRTVSTFG 412 (611)
Q Consensus 335 ~a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~--~~~~~~~r~~~~LVvr~i~TVg 412 (611)
+||+|++||||||+|+|||+++.+++|+|++++|||||||+| .||||||+|++++ ..+++|+| +||||+|+|||
T Consensus 328 ~an~L~lGcDCpg~i~YlD~~~~~~~G~p~~~~NaICihE~d-~Gil~kHt~~r~~~~~~~v~r~r---~LVvr~i~TVg 403 (692)
T 3sxx_A 328 MTNPLSLGCDCKGVIHYLDAHFSDRAGDPITVKNAVCIHEED-DGLLFKHSDFRDNFATSLVTRAT---KLVVSQIFTAA 403 (692)
T ss_dssp TBCCCTTTTTSCSSCEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEEECGGGTTCSEEEEEEE---EEEEEEEEEET
T ss_pred cccccccCCCCCCCcEEeeeEEecCCCCEEEecceEEEeecc-CCceEEeeeccCCCceeeEEecc---EEEEEEeeecc
Confidence 999999999999999999999999999999999999999999 5599999999887 56666666 99999999999
Q ss_pred ccceeEEEEEeeCccEEEEEeEeEeEEeeeeeeccCCCCc-cccccceeccCccccccceeEEeeeecCCCCCCCceEEE
Q 007236 413 NYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHME-EDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRS 491 (611)
Q Consensus 413 NYDYi~~w~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~-~~~yGt~V~~~~~g~~HqH~f~~RlD~dIdG~~Nsv~~~ 491 (611)
||||||||+|||||+||+||+|||||++++.. ... +.+|||+|+|+++|++|||+|||||||||||.+|||+++
T Consensus 404 NYDYif~w~F~qdG~Ie~ev~aTGil~t~~~~-----~~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~ 478 (692)
T 3sxx_A 404 NYEYCLYWVFMQDGAIRLDIRLTGILNTYILG-----DDEEAGPWGTRVYPNVNAHNHQHLFSLRIDPRIDGDGNSAAAC 478 (692)
T ss_dssp TEEEEEEEEECTTSCEEEEEEEEECCCCEECC-----TTCCCTTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEE
T ss_pred ceeEEEEEEEecCCeEEEEEEEEEEEEeeeeC-----CCcccCCCcceecCCccccceeEEEEEEeccccCCCCceEEEE
Confidence 99999999999999999999999999997652 112 478999999999999999999999999999999999999
Q ss_pred eEEEeecCC--CCCCCceeeEEEEEeecchhhHHhhcCC-CCcEEEEecCCCCCCC-CCcceEEEecCCccccCCCCCCh
Q 007236 492 KLRTTRVND--RRSSRKSYWTVDSKTAKTESDARIKLGS-EPAELLFVNPNKKTKM-GNLIGYRLIPEGVTGALLSSDDH 567 (611)
Q Consensus 492 d~~~~~~~~--~~~p~~~~~~~~~~~~~tE~~a~~~~~~-~~r~~~i~N~~~~N~~-G~p~gYrl~p~~~~~~~~~~~s~ 567 (611)
|+++++.+. +.||++++|++++++++||++|++++++ ++|+|+|+|++++|++ |+|+||||+|++++++|++++|+
T Consensus 479 d~~~~~~~~~~~~np~g~~~~~~~t~~~tE~ea~~~~~~~~~R~~~i~N~~~~N~~sG~pvgYkL~p~~~~~ll~~~~s~ 558 (692)
T 3sxx_A 479 DAKSSPYPLGSPENMYGNAFYSEKTTFKTVKDSLTNYESATGRSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSL 558 (692)
T ss_dssp EEEECSSCTTBTTBTTSCCEEEEEEECCBHHHHCBCCCGGGTCEEEEECTTCCCTTTCSCCEEEEECCCCCCCCSCTTSH
T ss_pred EeEEccCCCCCCCCCCcceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCccceEEEecCCCCcccCCCCch
Confidence 999998863 4799999999999999999999999999 9999999999999999 99999999999999999999999
Q ss_pred hhhcccccccceEEeccCCCCCCCCCCCCCCCCCC--CChhhhc
Q 007236 568 PQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGD--DTLAVWS 609 (611)
Q Consensus 568 ~~~ra~fa~~~lwVT~y~~~E~~asg~y~~qs~g~--~gl~~w~ 609 (611)
..+||+||+|+||||||+|+|+||||+|+|||.|+ +||++|+
T Consensus 559 ~~~ra~fa~~~lwVT~y~d~E~~aag~y~nQs~g~p~~gl~~w~ 602 (692)
T 3sxx_A 559 VAKRAPWASHSVNVVPYKDNRLYPSGDHVPQWSGDGVRGMREWI 602 (692)
T ss_dssp HHHHCGGGGSSEEEEECCTTCCCTTCSSCTTCCSCSSCHHHHHH
T ss_pred hhhhchhcccceEEecCCCCccCCCCCCccCCCCCCCCChHHHh
Confidence 99999999999999999999999999999999997 8999999
No 3
>3loy_A Copper amine oxidase; TPQ, oxidoreductase; HET: TPQ TLA; 2.00A {Pichia angusta}
Probab=100.00 E-value=3.5e-162 Score=1350.97 Aligned_cols=558 Identities=25% Similarity=0.403 Sum_probs=515.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcC--C--CCCCCcEEEEEEEeCCeeEEEE
Q 007236 27 YHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNE--T--TTNPPRQAFVIARIDHQTHELI 102 (611)
Q Consensus 27 ~HPldpLs~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vl~~l~~~--~--~~~p~R~A~vv~~~~~~~~E~v 102 (611)
.|||||||++||++|++||+++.++ .++++|++|+|.||+|++|++||+++ | .++|+|+|+|+++.+++++|++
T Consensus 1 ~HPLdpLs~~Ei~~a~~iv~~~~~~--~~~~~F~~i~L~EP~K~~v~~~l~~~~~g~~~~~p~R~a~v~~~~~~~~~e~v 78 (633)
T 3loy_A 1 VHPYDPISDAELQLTSQLIKDATKG--PERPHFIQIDRLDPPKKDMIRYLEAERTGKPLPHISRMTYVYYYIGLDFYKAL 78 (633)
T ss_dssp CCTTCCCCHHHHHHHHHHHHHHCCS--SSCEEEEEEEECCCCHHHHHHHHHHHHHTCCCCCCCCEEEEEEEETTEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHhhccC--CCCcEEEEEECCCCCHHHHHHHHhhhhcCCCCCCCCcEEEEEEEeCCCEEEEE
Confidence 4999999999999999999988753 25799999999999999999998752 1 3578899999887788999999
Q ss_pred EeCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHhhcCchHHHHHHHhCC-CCcceEEccccccccCCccccCCCCceEEE
Q 007236 103 VDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGL-KLEEVVCESFSVGWYGAEEEEGKNKKRIVK 181 (611)
Q Consensus 103 V~L~~~~v~~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~-~~~~v~~~~~~~G~~~~~~~~~~~~~Rl~~ 181 (611)
|||++++|++++.+++.+||+++.||+.+||++|++||+|+++|+|+|| +++.|.||||++|+.+ ++ ++|++|
T Consensus 79 Vdl~~~~v~~~~~~~~~~~p~~~~~e~~~~e~~~~~~p~~~~a~~~~gl~~~~~V~~dpw~~G~d~---~~---~~Rl~q 152 (633)
T 3loy_A 79 VNVSYGHIITNQKQPKGVIGPLIAEDIQEIEELATTHPIVKAEIEKLKLPPHVRVVCDPWMNGTDS---KE---DRMLIQ 152 (633)
T ss_dssp EETTTTEEEEEEECCTTCCCCCCHHHHHHHHHHHTTSHHHHHHHHTTCCCTTEEEEEEEEECCCSS---CC---CSCEEE
T ss_pred EECCCCeEEEEEecCCCccCCCCHHHHHHHHHHHHhCHHHHHHHHHcCCCCCceEEEeccccccCC---CC---CcEEEE
Confidence 9999999999999997679999999999999999999999999999999 6689999999999622 23 789999
Q ss_pred EEEEEec---CCCCCccCCcCCcEEEEecCccEEEEEECCce------e---ecCCCCCCCCccccCCCCCCCCCCCcee
Q 007236 182 VMCYYMN---GTVNLFMRPIEGISMTVDLDEMKIIGFQDRVT------V---PVPKADETEFRESKIKPPFRQSLKAITV 249 (611)
Q Consensus 182 ~~~f~~~---~~~n~Ya~Pl~gl~~~vD~~~~kvv~i~d~~~------~---~~p~~~~~~y~~~~~~~~~r~~lkp~~i 249 (611)
++||+|. +++|+|||||| |+++||++++||++|++... . |.++.+..+|.++.+.+ .|+++|||.|
T Consensus 153 ~~~y~r~~~~~~~N~Ya~Pl~-~~~vvD~~~~~vi~id~~~~g~~~~~~~~~p~~~~~~~~Y~p~~~~~-~r~d~kp~~i 230 (633)
T 3loy_A 153 CYMYLASAAHPESNHYSLPLK-FSPVFECLTKKFVRMDYLPGGADETVTETQAWDEFPFVEYHPDLNGE-TIVPLKPLIV 230 (633)
T ss_dssp EEEEEEETTCTTCCGGGSBCS-EEEEEETTTCCEEEEEECCCSSSSCCCSCCCCCCCCCCCCSTTTSCC-CCCCCCCCEE
T ss_pred EEEEEecCCCCCccccccccc-eEEEEECCCCEEEEEEecCcCcccccccccCCCCCCCCCcChhHccc-ccCCCCCcce
Confidence 9999993 58999999998 88999999999999997411 1 23345568999887744 8999999999
Q ss_pred eCCCCCeeEEeceEEeeeeeEEEEeecCCCceeEEeeEEeccCCCceeEEEEEeeeeeEeeeCCCCCccccccceeecCC
Q 007236 250 VQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGE 329 (611)
Q Consensus 250 ~QPeG~sf~v~g~~V~w~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~v~Yrlsl~Em~vpYgdp~~~~~~k~~~D~ge 329 (611)
+||||+||+|+|++|+||+|+||||||+|||||||||+|+| |||+||+|||||+||||||+++|++|+|||+||
T Consensus 231 ~QPeG~sF~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~g------r~V~YrlSl~Em~VPYgdp~~p~~~k~afD~Ge 304 (633)
T 3loy_A 231 QQPEGPSFNVDGHKISWQGWEFFVIPTVREGFAIYDIHFKG------RSVVYRLSLSEMTVPYGDPRAPFHRKQAFDLGD 304 (633)
T ss_dssp ECTTCCSEEEETTEEEETTEEEEEEEETTTEEEEEEEEETT------EEEEEEEEEEEEEEEBCCCSTTGGGCEEEHHHH
T ss_pred eCCCCCCEEEcCCccccCCcEEEEecCCCcCcEEEeeEECC------EEEEEEEEeeeEEEeCCCCCChhhhheeecccc
Confidence 99999999999999999999999999999999999999854 999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCCCCCCcEEeeeEEecCCCCeeeeCceEEEeEEeCCCceeecccCCCCCcEEEeeeeceeEEEEEee
Q 007236 330 YGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVS 409 (611)
Q Consensus 330 yG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~ 409 (611)
||+|.+||+|++||||||+|+|||+++.+++|+|++++|||||||+| .|++|||++++++.++++|+| +||||+|+
T Consensus 305 yG~G~~a~~L~~GcDCpg~i~YlD~~~~~~~G~p~~~~naICihE~d-~Gi~~kHt~~r~~~~~v~r~r---~LVvr~i~ 380 (633)
T 3loy_A 305 CGFGATGNSLALGCDCLGVIKYMDCRRVNTNGDSVLIPNTVCLHEQD-GGLLYKHTNYRTNVPVIARRR---EFVVQTIA 380 (633)
T ss_dssp TCTTTTBCCSTTTTCSCSSEEEEEEEEECTTSCEEEEEEEEEEEEEE-EEEEEEEECTTTCCEEEEEEE---EEEEEEEE
T ss_pred cCccccccCCccCCCCCCCcEEeeeEEecCCCCEEEecceEEEEecc-CCceeeeccccCCceeEEEee---EEEEEEEe
Confidence 99999999999999999999999999999999999999999999999 669999999999887777777 99999999
Q ss_pred eecccceeEEEEEeeCccEEEEEeEeEeEEeeeeeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceE
Q 007236 410 TFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFV 489 (611)
Q Consensus 410 TVgNYDYi~~w~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~~~~yGt~V~~~~~g~~HqH~f~~RlD~dIdG~~Nsv~ 489 (611)
|||||||||||+|||||+||+||+|||||++++.. +.++.+|||+|+|+++|++|||+|||||||||||.+|||+
T Consensus 381 TVgNYdYif~w~F~~dG~Ie~ev~aTGil~t~~~~-----~~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~ 455 (633)
T 3loy_A 381 TVANAEYMLNIIFDQAGEIRIHVRATGILSTMPLD-----KDVTVPWGTNVGPRVMAAYHQHMLSFRIDPAVDGYENTVV 455 (633)
T ss_dssp EETTEEEEEEEEEETTSCEEEEEEEEECCCCEECC-----TTCCCTTEEEEETTEEEECEEEEEEEEEEECTTSSCBEEE
T ss_pred eccceeEEEEEEEecCCeEEEEEEEEEEEeeeecC-----CcccCCCcceecCCccccceeEEEEEEecccccCCCCEEE
Confidence 99999999999999999999999999999986542 2235789999999999999999999999999999999999
Q ss_pred EEeEEEeecCCCCCCCceeeEEEEEeecchhhHHhhcCC-CCcEEEEecCCCCCCC-CCcceEEEecCCccccCCCCCCh
Q 007236 490 RSKLRTTRVNDRRSSRKSYWTVDSKTAKTESDARIKLGS-EPAELLFVNPNKKTKM-GNLIGYRLIPEGVTGALLSSDDH 567 (611)
Q Consensus 490 ~~d~~~~~~~~~~~p~~~~~~~~~~~~~tE~~a~~~~~~-~~r~~~i~N~~~~N~~-G~p~gYrl~p~~~~~~~~~~~s~ 567 (611)
++|+++++.+...||++++|+++++.+++| +++++++ ++|+|+|+|++++|++ |+|+||||+|++++++|+.++|+
T Consensus 456 ~~d~~~~~~~~~~nP~g~~~~~~~t~l~~e--a~~~~~~~~~r~~~i~N~~~~N~~~G~p~gYkl~p~~~~~ll~~~~s~ 533 (633)
T 3loy_A 456 FDDVIRMEKNTKLNPYNVGFVTERTVVEKP--GYVEQSPFTNRSYKIINENKINPISKKPVAYKIMMPARQMLLADEDSY 533 (633)
T ss_dssp EEEEEECCSSSSSSTTSCCEEEEEEECCSS--EEECCCGGGTCEEEEEEEEEECTTTCSEEEEEEECCCCCCCCSCSSSH
T ss_pred EEeeeecCCCCCCCCCCcceEEEEEEeccc--cccccCCCCccEEEEECCCCcCCCCCccceEEEccCCCCcccCCCCch
Confidence 999999988655899999999999999887 6799999 9999999999999996 99999999999999999999999
Q ss_pred hhhcccccccceEEeccCCCCCCCCCCCCCCCCCCCChhhhccC
Q 007236 568 PQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR 611 (611)
Q Consensus 568 ~~~ra~fa~~~lwVT~y~~~E~~asg~y~~qs~g~~gl~~w~~r 611 (611)
..+||+||+||||||||+|+|+||||+|+|||.|++||++|+++
T Consensus 534 ~~~Ra~fa~~~lwVT~y~d~E~~aag~y~nQs~~~~gl~~w~~~ 577 (633)
T 3loy_A 534 NNKRAQFATQQVWVTKYRDNELYAAGEFTNQSQTDTGLGVWARR 577 (633)
T ss_dssp HHHHCGGGGSSEEEEECCTTCCCTTCSCCTTCSSCCSHHHHTTC
T ss_pred hhhccchhhcceEEecCCCCccccCCCCccCCCCCCChHHHhcC
Confidence 99999999999999999999999999999999999999999963
No 4
>1w6g_A Phenylethylamine oxidase; copper containing, metal-binding, oxidoreductase, TPQ, quinone, holoenzyme; HET: TPQ GOL; 1.55A {Arthrobacter globiformis} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1w6c_A* 1rjo_A* 2bt3_A* 2cfd_A* 2cfg_A* 2cfk_A* 2cfl_A* 2cfw_A* 2cg0_A* 2cg1_A* 1w4n_A* 1sih_A* 1sii_A* 1w5z_A* 3kii_A* 3kn4_A* 1iqy_A* 1avl_A* 1av4_A* 1iqx_A* ...
Probab=100.00 E-value=1e-160 Score=1345.02 Aligned_cols=559 Identities=23% Similarity=0.403 Sum_probs=516.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCcEEEEEEEe--CCeeEEE
Q 007236 24 SHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARI--DHQTHEL 101 (611)
Q Consensus 24 ~~~~HPldpLs~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vl~~l~~~~~~~p~R~A~vv~~~--~~~~~E~ 101 (611)
...+|||||||++||++|++||+++.+. .++++|++|+|+||+|++ + .++|+|+|+|++++ +++++|+
T Consensus 4 ~~~~HPldpLs~~Ei~~a~~iv~~~~~~--~~~~~F~~i~L~eP~K~~------g--~~~P~R~A~vv~~~~~~~~~~E~ 73 (646)
T 1w6g_A 4 IQTASPFRLASAGEISEVQGILRTAGLL--GPEKRIAYLGVLDPARGA------G--SEAEDRRFRVFIHDVSGARPQEV 73 (646)
T ss_dssp ---CCTTCCCCHHHHHHHHHHHHHTTCC--CTTEEEEEEEECCCCSCC------S--SSCCCCEEEEEEEETTSCCCEEE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcccC--CCCcEEEEEEccCCchhh------C--CCCCCeEEEEEEEECCCCcEEEE
Confidence 3457999999999999999999998763 258999999999999999 3 35789999999998 5689999
Q ss_pred EEeCCCCeEEE---EEeeCCCCCCCCCHHHHHHHHHHhhcCchHHHHHHHhCC-CCcceEEccccccccCCccccCCCCc
Q 007236 102 IVDLSLQEIAS---KRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGL-KLEEVVCESFSVGWYGAEEEEGKNKK 177 (611)
Q Consensus 102 vV~L~~~~v~~---~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~-~~~~v~~~~~~~G~~~~~~~~~~~~~ 177 (611)
+|+|+.++|++ ++.+++ .||+++.||+.++|++|+++|.|+++|+++|| +++.|+| ||++|||+...+. ++
T Consensus 74 vV~L~~~~v~~~~~~~~~~~-~~~~~~~~E~~~~e~~~~~~p~~~~~i~~~gl~~~~~v~~-pw~~g~~~~~~~~---~~ 148 (646)
T 1w6g_A 74 TVSVTNGTVISAVELDTAAT-GELPVLEEEFEVVEQLLATDERWLKALAARNLDVSKVRVA-PLSAGVFEYAEER---GR 148 (646)
T ss_dssp EEETTTTEEEEEEECCHHHH-CBCCCCHHHHHHHHHHHTTCHHHHHHHHHTTCCGGGEEEE-EEECCCCSCGGGT---TS
T ss_pred EEECCCCeEEecccceeCCC-ccCCCCHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCeeEE-eecccccCCccCC---Cc
Confidence 99999999998 677774 59999999999999999999999999999999 4677999 9999998755433 78
Q ss_pred eEEEEEEEEec-CCCCCccCCcCCcEEEEecCccEEEEEECCceeecCCCCCCCCccccCCCCCCCCCCCceeeCCCCCe
Q 007236 178 RIVKVMCYYMN-GTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPS 256 (611)
Q Consensus 178 Rl~~~~~f~~~-~~~n~Ya~Pl~gl~~~vD~~~~kvv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~s 256 (611)
|++|++||+|. +++|+|+|||+||+++||+++|||++|++.+.++.|. ...+|.++.+.++.|+++|||+|+||||+|
T Consensus 149 Rl~~~~~~~r~~~~~n~Ya~Pl~gl~~vvD~~~~~Vi~v~~~~~~~~p~-~~~~y~~~~~~~~~r~~lkP~~i~QPeGps 227 (646)
T 1w6g_A 149 RILRGLAFVQDFPEDSAWAHPVDGLVAYVDVVSKEVTRVIDTGVFPVPA-EHGNYTDPELTGPLRTTQKPISITQPEGPS 227 (646)
T ss_dssp CEEEEEEEECSSTTCCGGGSBCTTEEEEEETTTTEEEEEEECCCCCCCC-SCCCTTCHHHHCSCCCCCCCCCCCCTTCCS
T ss_pred EEEEEEEEEecCCCCCccccccCceEEEEECCCCEEEEEEeCCccCCCC-CCCccchhhcCCCcCCCCCCceecCCCCCc
Confidence 99999999985 5789999999999999999999999999987666665 456998776545679999999999999999
Q ss_pred eEEe-ceEEeeeeeEEEEeecCCCceeEEeeEEeccCCCceeEEEEEeeeeeEeeeCCCCCccccccceeecCCCCCCcc
Q 007236 257 FTID-GHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLC 335 (611)
Q Consensus 257 f~v~-g~~V~w~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~v~Yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~ 335 (611)
|+|+ |++|+||||+||||||+|||||||||+|+| +++.|||+||+|||||+||||||+++|++|+|||+||||+|.+
T Consensus 228 F~V~~G~~V~W~~W~F~vgfn~ReGlvL~dV~y~~--~g~~R~V~YrlSlsEm~VPYgdp~p~~~~k~afD~GeyG~G~~ 305 (646)
T 1w6g_A 228 FTVTGGNHIEWEKWSLDVGFDVREGVVLHNIAFRD--GDRLRPIINRASIAEMVVPYGDPSPIRSWQNYFDTGEYLVGQY 305 (646)
T ss_dssp CEEETTTEEEETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCCTTTTTCEEECCCCCCGGGG
T ss_pred eEEeCCCEEEeCCCEEEEecCCCcceEEEEEEEcC--CCCceEEEEEeeeeEEEEeCCCCCchhhcceeeeccCcCCccc
Confidence 9999 999999999999999999999999999999 5678999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCcEEeeeEEecCCCCeeeeCceEEEeEEeCCCceeecccCCCCCcEEEeeeeceeEEEEEeeeecccc
Q 007236 336 SMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYD 415 (611)
Q Consensus 336 a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYD 415 (611)
||+|++||||||+|+|||+++.+++|+|++++|||||||+|.| |||||+|++++..+++++| +||||+|+||||||
T Consensus 306 an~L~lGcDCpg~i~Y~D~~~~~~~G~p~~~~naICihE~d~G-ilwkH~~~r~~~~~v~r~r---~LVvr~i~Tv~NYd 381 (646)
T 1w6g_A 306 ANSLELGCDCLGDITYLSPVISDAFGNPREIRNGICMHEEDWG-ILAKHSDLWSGINYTRRNR---RMVISFFTTIGNAD 381 (646)
T ss_dssp BCCCCBTTTBCSSCEEECCEEECTTSCEEECTTCEEEEEEEEE-EEEEEECTTTCCEEEEEEE---EEEEEEEEEETTEE
T ss_pred ccccccCCCCCCCCEEEeEEEEcCCCCEEEcCCEEEEeeccCC-cceeeecccCCceeeeccc---EEEEEEEeeccccc
Confidence 9999999999999999999999999999999999999999955 9999999999766655555 99999999999999
Q ss_pred eeEEEEEeeCccEEEEEeEeEeEEeeeeeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEeEEE
Q 007236 416 YVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRT 495 (611)
Q Consensus 416 Yi~~w~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~~~~yGt~V~~~~~g~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~ 495 (611)
|||+|+|||||+||+||+|||||+++++.. ++.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++
T Consensus 382 Yi~~w~F~~dG~Ie~ev~aTGil~t~~~~~------~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~ 455 (646)
T 1w6g_A 382 YGFYWYLYLDGTIEFEAKATGVVFTSAFPE------GGSDNISQLAPGLGAPFHQHIFSARLDMAIDGFTNRVEEEDVVR 455 (646)
T ss_dssp EEEEEEEETTSCEEEEEEEEECCCCEECCT------TCCSSEEEEETTEEEECEEEEEEEEEEECTTSSCBEEEEEEEEE
T ss_pred eEEEEEEecCCeEEEEEEEEEEEeeeecCC------ccCCCcceecCCcccccceEEEEEeecccccCCCCEEEEEeeEe
Confidence 999999999999999999999999976531 24789999999999999999999999999999999999999999
Q ss_pred eecCCCCCCCceeeEEEEEeecchhhHHhhcCC-CCcEEEEecCCCCCCCCCcceEEEecCCccccCCCCCChhhhcccc
Q 007236 496 TRVNDRRSSRKSYWTVDSKTAKTESDARIKLGS-EPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAF 574 (611)
Q Consensus 496 ~~~~~~~~p~~~~~~~~~~~~~tE~~a~~~~~~-~~r~~~i~N~~~~N~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~f 574 (611)
++.+ +.||++++|+++++++++|++|++++++ ++|+|+|+|++++|++|+|+||||+|++++.++++++|+..+||+|
T Consensus 456 ~~~~-~~np~~~~~~~~~t~~~tE~ea~~~~~~~~~r~~~i~N~~~~N~~G~p~gYkl~~~~~~~~l~~~~s~~~~ra~f 534 (646)
T 1w6g_A 456 QTMG-PGNERGNAFSRKRTVLTRESEAVREADARTGRTWIISNPESKNRLNEPVGYKLHAHNQPTLLADPGSSIARRAAF 534 (646)
T ss_dssp CCSB-TTBTTSCCEEEEEEEECBGGGCEECCCGGGTCEEEEEEEEEECTTSCEEEEEEEECCCCCCCSCTTSHHHHHTGG
T ss_pred ccCC-CCCCCCceeEEEEEEccchhhhhhccCCCCCcEEEEeCCCCcCCCCCeeeEEEccCCcccccCCCCccccccccc
Confidence 9875 5899999999999999999999999999 8999999999999999999999999999999999999999999999
Q ss_pred cccceEEeccCCCCCCCCCCCCCCCCCCCChhhhccC
Q 007236 575 TNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR 611 (611)
Q Consensus 575 a~~~lwVT~y~~~E~~asg~y~~qs~g~~gl~~w~~r 611 (611)
|+|+||||||+|+|+||||+|+|||.|++||++|+++
T Consensus 535 a~~~lwVT~y~d~E~~aag~y~nQs~~~~~l~~~~~~ 571 (646)
T 1w6g_A 535 ATKDLWVTRYADDERYPTGDFVNQHSGGAGLPSYIAQ 571 (646)
T ss_dssp GGSSEEEEECCTTCCCTTCSCCBTCCSSSSHHHHHTT
T ss_pred cccceEEeccCCCccccCCCCcccCCCCCChhHHhhC
Confidence 9999999999999999999999999999999999964
No 5
>1spu_A Copper amine oxidase; oxidoreductase, TPQ, periplasmic, signal; HET: PAQ; 2.00A {Escherichia coli} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 d.82.1.1 PDB: 1d6y_A* 1d6u_A* 1d6z_A* 2wgq_A 1oac_A* 1dyu_A* 2w0q_A* 2wo0_A* 2wof_A* 2woh_A* 1lvn_A* 1jrq_A* 1qak_A* 1qaf_A* 1qal_A*
Probab=100.00 E-value=1.6e-156 Score=1332.56 Aligned_cols=572 Identities=31% Similarity=0.577 Sum_probs=516.8
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCcEEEEEEEeCCeeEEE
Q 007236 22 VPSHQYHPLDSLTPSEFSQIRSIVTKAYPESSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDHQTHEL 101 (611)
Q Consensus 22 ~~~~~~HPldpLs~~Ei~~a~~il~~~~~~~~~~~~~f~~I~L~eP~K~~vl~~l~~~~~~~p~R~A~vv~~~~~~~~E~ 101 (611)
+....+|||||||++||++|++||+++... .++++|.+|+|+||+|++||+||..+++++|+|+|+|+++++++++|+
T Consensus 88 ~~~~~~HPLdpLs~~Ei~~a~~il~~~~~~--~~~~~F~~i~L~eP~K~~vl~~~~~~~~~~p~R~A~vv~~~~~~~~e~ 165 (727)
T 1spu_A 88 QVEKRPHPLNALTADEIKQAVEIVKASADF--KPNTRFTEISLLPPDKEAVWAFALENKPVDQPRKADVIMLDGKHIIEA 165 (727)
T ss_dssp ECCSSCCTTCCCCHHHHHHHHHHHHTSTTC--CTTCEEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEEEETTEEEEE
T ss_pred eecccCCCCCcCCHHHHHHHHHHHHhcccC--CCCcEEEEEEecCCCHHHHHhHHhcCCCCCCCeEEEEEEEeCCeEEEE
Confidence 344567999999999999999999987542 258899999999999999999975433456899999999999999999
Q ss_pred EEeCCCCeEEEEEeeCCCCCCCCCHHHHHHHHHHhhcCchHHHHHHHhCC-CCcceEEccccccccCCccccCCCCceEE
Q 007236 102 IVDLSLQEIASKRIYSGYGYPMFTFEDQENADKLAFTYPPFVASIRRRGL-KLEEVVCESFSVGWYGAEEEEGKNKKRIV 180 (611)
Q Consensus 102 vV~L~~~~v~~~~~~~~~~~p~~~~ee~~~~e~~~~~~p~~~~a~~~~g~-~~~~v~~~~~~~G~~~~~~~~~~~~~Rl~ 180 (611)
+|+|+++++++++.+++ .||+++.||+.++|++|+++|.|+++|+++|+ ++..|.|+||++|||+.+.+. .+++|++
T Consensus 166 vV~l~~~~v~~~~~~~~-~~~~~~~~e~~~~e~~~~~~p~~~~~~~~~gl~~~~~v~~dpw~~g~~~~~~~~-~~~~R~~ 243 (727)
T 1spu_A 166 VVDLQNNKLLSWQPIKD-AHGMVLLDDFASVQNIINNSEEFAAAVKKRGITDAKKVITTPLTVGYFDGKDGL-KQDARLL 243 (727)
T ss_dssp EEETTTTEEEEEEEETT-CCCCCCHHHHHHHHHHHHHCHHHHHHHHHTTCSCTTSEEEEEECCCCCTTTTCC-CSSSCEE
T ss_pred EEeCCCCceEEEEeCCC-cCCCCCHHHHHHHHHHHHhCHHHHHHHHHhCCCccceEEEccccccccCCCCCC-CCCcEEE
Confidence 99999999999988885 58999999999999999999999999999999 789999999999988744321 1368999
Q ss_pred EEEEEEecCCCCCccCCcCCcEEEEecCccEEEEEECCceeecCCCCCCCCccccCCCCCCCCCCCceeeCCCCCeeEEe
Q 007236 181 KVMCYYMNGTVNLFMRPIEGISMTVDLDEMKIIGFQDRVTVPVPKADETEFRESKIKPPFRQSLKAITVVQPDGPSFTID 260 (611)
Q Consensus 181 ~~~~f~~~~~~n~Ya~Pl~gl~~~vD~~~~kvv~i~d~~~~~~p~~~~~~y~~~~~~~~~r~~lkp~~i~QPeG~sf~v~ 260 (611)
|++||++.+++|+|+||||||+++||+++|||++|++.+.++.|.. ..+|.++. +.|+++|||+|+||||+||+|+
T Consensus 244 ~~~~~~~~~~~n~Ya~Pl~g~~~vvD~~~~~V~~i~~~~~~~~p~~-~~~y~~~~---~~r~~lkP~~i~QPeG~sF~v~ 319 (727)
T 1spu_A 244 KVISYLDVGDGNYWAHPIENLVAVVDLEQKKIVKIEEGPVVPVPMT-ARPFDGRD---RVAPAVKPMQIIEPEGKNYTIT 319 (727)
T ss_dssp EEEEEECCSSSCGGGSBCTTEEEEEETTTTEEEEEEECCCCCCCCS-CCCSSSTT---EECCCCCCCEEECTTCCSEEEE
T ss_pred EEEEEEECCCCCccccCccceEEEEecccCEEEEEEcCCccccCCC-CCCccccc---cccCCCCCccccCCCCCCEEEC
Confidence 9999997667999999999999999999999999998876666654 34687654 4699999999999999999999
Q ss_pred ceEEeeeeeEEEEeecCCCceeEEeeEEeccCCCceeEEEEEeeeeeEeeeCCCCCccccccceeecCCCCCCccccCCC
Q 007236 261 GHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLE 340 (611)
Q Consensus 261 g~~V~w~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r~v~Yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~ 340 (611)
|++|+||||+||||||+|||||||||+|+| +|+.|||+||+|||||+||||||+++|+||+|||+||||+|.+||+|+
T Consensus 320 g~~V~W~~W~F~vgf~~reGlvL~dV~y~~--~g~~r~V~YrlSl~Em~VPYgdp~~~~~~k~~fD~GeyG~G~~a~~L~ 397 (727)
T 1spu_A 320 GDMIHWRNWDFHLSMNSRVGPMISTVTYND--NGTKRKVMYEGSLGGMIVPYGDPDIGWYFKAYLDSGDYGMGTLTSPIA 397 (727)
T ss_dssp TTEEEETTEEEEEEEETTTEEEEEEEEEEE--TTEEEEEEEEEEEEEEEEEBCCCSTTTTTCEECHHHHHCTTTTBCCCC
T ss_pred CCccccCCcEEEEecCCCCceEEEEEEEcC--CCceEEEEEEeEeeEEEEeCCCCCCchhcceeeeccCcCCcccccccc
Confidence 999999999999999999999999999999 568899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcEEeeeEEecCCCCeeeeCceEEEeEEeCCCceeecccCCCCCcEEEeeeeceeEEEEEeeeecccceeEEE
Q 007236 341 PLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDW 420 (611)
Q Consensus 341 ~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~w 420 (611)
+||||||+|+|||+++.+++|+|++++|||||||+|. ||||||+|++.. ..+++ +++||||+|+|||||||||+|
T Consensus 398 lGcDCpg~i~Y~D~~~~~~~G~p~~~~naiCi~E~d~-G~l~kH~~~~~~-~~~~r---~r~LVv~~i~Tv~NYdYi~~w 472 (727)
T 1spu_A 398 RGKDAPSNAVLLNETIADYTGVPMEIPRAIAVFERYA-GPEYKHQEMGQP-NVSTE---RRELVVRWISTVGNYDYIFDW 472 (727)
T ss_dssp TTTTSCTTCEEEEEEEECTTSCEEEEEEEEEEEEEEE-EEEEEECCTTSC-CEEEE---EEEEEEEEEEEETTEEEEEEE
T ss_pred cCCCCCCCCEEeeeEEEcCCCCEEEeCCeEEEecccC-CcceeeeccCCC-ceeee---ceEEEEEEEEeecccceEEEE
Confidence 9999999999999999999999999999999999995 699999999853 44444 459999999999999999999
Q ss_pred EEeeCccEEEEEeEeEeEEeeeeeeccCCCC---ccccccceeccCccccccceeEEeeeecCCCCCCCceEEEeEEEee
Q 007236 421 EFKQSGSIKVTVGLTGMVQVRGTTYTHKDHM---EEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTR 497 (611)
Q Consensus 421 ~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~---~~~~yGt~V~~~~~g~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~ 497 (611)
+|||||+||+||+|||||+++++.++..... .+.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++
T Consensus 473 ~F~~dG~I~~ev~aTGil~~~~~~~t~~~~~~~~~~~~yGt~v~~~~~a~~HqH~f~~RlD~dVdG~~Nsv~~~d~~~~~ 552 (727)
T 1spu_A 473 IFHENGTIGIDAGATGIEAVKGVKAKTMHDETAKDDTRYGTLIDHNIVGTTHQHIYNFRLDLDVDGENNSLVAMDPVVKP 552 (727)
T ss_dssp EEETTSCEEEEEEEEECCCEEECSCSSTTSTTHHHHTTTEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEE
T ss_pred EEecCceEEEEEEEEEEEEeccccccccccccccccCCCcceecCCcccccceeEEEEeecccccCCCCeEEEEeeEEcc
Confidence 9999999999999999999876532211111 1368999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCceeeEEEEEeecchhhHHhhcCC-CCcEEEEecCCCCCCCCCcceEEEecC--Cc----cccCCCCCChhhh
Q 007236 498 VNDRRSSRKSYWTVDSKTAKTESDARIKLGS-EPAELLFVNPNKKTKMGNLIGYRLIPE--GV----TGALLSSDDHPQI 570 (611)
Q Consensus 498 ~~~~~~p~~~~~~~~~~~~~tE~~a~~~~~~-~~r~~~i~N~~~~N~~G~p~gYrl~p~--~~----~~~~~~~~s~~~~ 570 (611)
.+ +.||++++|+++++++++|++|++++++ ++|+ |+|++++|++|+|+||||+|. .+ +.++++++|++.+
T Consensus 553 ~~-~~np~~~~~~~~~t~~~tE~~a~~~~~~~~~r~--i~n~~~~N~~G~p~gYkl~~~~~~~~~~~~~~l~~~~s~~~~ 629 (727)
T 1spu_A 553 NT-AGGPRTSTMQVNQYNIGNEQDAAQKFDPGTIRL--LSNPNKENRMGNPVSYQIIPYAGGTHPVAKGAQFAPDEWIYH 629 (727)
T ss_dssp CC-SCSSCSEEEEEEEEEECBHHHHSBCCCTTSEEE--EEEEEEECTTSCEEEEEEEEEEEESSCBCCSCSSCTTCHHHH
T ss_pred CC-CCCCCCceeEEEEEEccchhhhhhccCCCCcEE--EeCCCCcCCCCCeeeEEEecCCCCccccccccccCCcchhhh
Confidence 75 4699999999999999999999999999 7777 899999999999999999993 32 5688999999999
Q ss_pred cccccccceEEeccCCCCCCCCCCCCCCCCCCCChhhhccC
Q 007236 571 RAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDTLAVWSNR 611 (611)
Q Consensus 571 ra~fa~~~lwVT~y~~~E~~asg~y~~qs~g~~gl~~w~~r 611 (611)
||+||+||||||||+|+|+||||+|+|||+|++||++|+++
T Consensus 630 ra~fa~~~lwVT~y~d~E~~a~g~y~~q~~~~~gl~~~~~~ 670 (727)
T 1spu_A 630 RLSFMDKQLWVTRYHPGERFPEGKYPNRSTHDTGLGQYSKD 670 (727)
T ss_dssp HCGGGGCSEEEEECCTTCCCTTCSCCTTCSSCCSHHHHHTT
T ss_pred hhcccccceEEeccCCcccCCCCCCccCCCCCCCHHHHhhC
Confidence 99999999999999999999999999999999999999964
No 6
>1tu5_A Copper amine oxidase, liver isozyme; oxidoreductase, quinoenzyme, TPQ; HET: TPQ NAG NDG; 2.37A {Bos taurus} PDB: 2pnc_A* 3ala_A* 2y73_A* 1pu4_A* 1us1_A* 2y74_A* 2c10_A* 2c11_A*
Probab=100.00 E-value=2.3e-140 Score=1194.01 Aligned_cols=554 Identities=21% Similarity=0.285 Sum_probs=457.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcC---CC-----CCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCcEEEEEEEeC-
Q 007236 25 HQYHPLDSLTPSEFSQIRSIVTKAY---PE-----SSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARID- 95 (611)
Q Consensus 25 ~~~HPldpLs~~Ei~~a~~il~~~~---~~-----~~~~~~~f~~I~L~eP~K~~vl~~l~~~~~~~p~R~A~vv~~~~- 95 (611)
..+|||||||++||++|+++|+++. +. ++.++ +|++|+|+||+|++||+|||+++ ++|+|+|+|+++++
T Consensus 38 ~~~~~~~~Ls~~E~~~V~~~L~~~~~l~L~~~~~a~~~dn-~i~~IeL~~P~K~~vL~~Ld~~~-~~P~R~A~vv~~~~~ 115 (746)
T 1tu5_A 38 DQSQLFADLSREELTTVMSFLTQQLGPDLVDAAQARPSDN-CVFSVELQLPPKAAALAHLDRGS-PPPAREALAIVFFGG 115 (746)
T ss_dssp ---CCSSCCCHHHHHHHHHHHHHHHCSSCBCTTTCCTTSE-EEEEEEEECCCHHHHHHHHHHCC-CCCCCEEEEEEEECS
T ss_pred CCCCcCCCCCHHHHHHHHHHHhccCccCccccccCCcccc-EEEEEECCCCCHHHhhhhhcCCC-CCCCccEEEEEEeCC
Confidence 4569999999999999999998875 21 12235 78889999999999999999984 78999999999986
Q ss_pred ---CeeEEEEEe-CCCCeEEEEEeeC--CCCCC----CCCHHHHHHHHHHhhcCchHHHHHHHhCC-CCcc--eEEcccc
Q 007236 96 ---HQTHELIVD-LSLQEIASKRIYS--GYGYP----MFTFEDQENADKLAFTYPPFVASIRRRGL-KLEE--VVCESFS 162 (611)
Q Consensus 96 ---~~~~E~vV~-L~~~~v~~~~~~~--~~~~p----~~~~ee~~~~e~~~~~~p~~~~a~~~~g~-~~~~--v~~~~~~ 162 (611)
..++|++|+ |+.+++.+....+ +..+| +++.+|+.+++++|+++|.++++|.++|+ ++.+ ++|++|.
T Consensus 116 ~~~~~v~E~vV~PL~~~~~~~~~~~~~~~~~~p~~~r~i~~~E~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~ 195 (746)
T 1tu5_A 116 QPQPNVTELVVGPLPQPSYMRDVTVERHGGPLPYYRRPVLLREYLDIDQMIFNRELPQAAGVLHHCCSYKQGGQKLLTMN 195 (746)
T ss_dssp SSSCEEEEEEEESSSSCCEEEECHHHHHSSCEEGGGSCCCHHHHHHHHHHHHHTTGGGGHHHHHHHHCTTTTCCCEEEEC
T ss_pred CCCCceEEEEecCCCCCcEEEEcccCCCCCcCCcccCCCCHHHHHHHHHHHHHCHHHHHHHHHhcCCCcccCCEEEeCcc
Confidence 357899999 9999875332112 33477 99999999999999999999999998665 3333 7788885
Q ss_pred ccccCCccccCCCCceEEEEEEEEecCCCCCccCCcCCcEEEEecC-----ccEEEEEECCce-e---------------
Q 007236 163 VGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLD-----EMKIIGFQDRVT-V--------------- 221 (611)
Q Consensus 163 ~G~~~~~~~~~~~~~Rl~~~~~f~~~~~~n~Ya~Pl~gl~~~vD~~-----~~kvv~i~d~~~-~--------------- 221 (611)
.|..+ .. .++|++|++||.+...+|+|+||| ||+++||++ +|||++|++.+. .
T Consensus 196 ~~p~~---~~--~g~R~~~~~~~r~~~~~n~Y~~Pl-g~~~~vD~~~~D~~~~~V~~i~y~g~~~~s~~el~~~~~~g~~ 269 (746)
T 1tu5_A 196 SAPRG---VQ--SGDRSTWFGIYYNITKGGPYLHPV-GLELLVDHKALDPADWTVQKVFFQGRYYENLAQLEEQFEAGQV 269 (746)
T ss_dssp CSSCS---SS--TTCCEEEEEEEECCSSSCGGGSEE-EEEEEEECCSSSGGGCEEEEEEETTEEESSHHHHHHHHHTTCC
T ss_pred ccCCc---CC--CCcEEEEEEEEEecCCCCccccce-eeEEEEeCCCCCcccCEEEEEEECCCccCchhhhhcccccCCc
Confidence 44222 11 268999999975533489999999 799999996 799999986642 1
Q ss_pred -ecCCCCCCCCcccc--CCCC-CCCCCCCceeeCCCCCeeEEeceEEeeeeeEEEEeecCCCceeEEeeEEeccCCCcee
Q 007236 222 -PVPKADETEFRESK--IKPP-FRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIISLASIYDLEKQQSR 297 (611)
Q Consensus 222 -~~p~~~~~~y~~~~--~~~~-~r~~lkp~~i~QPeG~sf~v~g~~V~w~~W~f~~gf~~reGlvL~~v~~~D~~~~~~r 297 (611)
++|. ..+|.++. .... .|.++ ||+|+||||+||+|+|+.|+||||+||||||+|||||||||+|. +|
T Consensus 270 ~~~~~--p~~~~~~~~~~~~~~~r~~~-p~~i~QPeG~sF~v~g~~V~W~~W~f~vgf~~reGlvL~dv~y~------gr 340 (746)
T 1tu5_A 270 NVVVI--PDDGTGGFWSLKSQVPPGPT-PPLQFHPQGPRFSVQGNRVASSLWTFSFGLGAFSGPRVFDVRFQ------GE 340 (746)
T ss_dssp CCCCC--CC-----------------------------CEEEETTEEEESSEEEEEEEETTTEEEEEEEEET------TE
T ss_pred ccccC--ccccCcccccccccccCCCC-CcceeCCCCCCEEecCCcccCCCcEEEEecCCCCceEEEeeEEC------Ce
Confidence 1111 11344333 2222 25555 99999999999999999999999999999999999999999984 39
Q ss_pred EEEEEeeeeeEeeeCCCCCccccccceeecCCCCCCccccCCCCCCCCCCCcEEeeeEEecCCCCeeeeCceEEEeEEeC
Q 007236 298 RVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKAFCIFERYA 377 (611)
Q Consensus 298 ~v~Yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~naiCi~E~d~ 377 (611)
||+||+|||||+||||||+|.+.+|+|||.+ ||+|.+||+|++||||||+|+|||+++.+++|+|++++|||||||+|.
T Consensus 341 ~V~YrlSl~Em~VPYgdp~p~~~~~~~~D~~-yG~G~~a~~L~~GcDCpg~i~Y~D~~~~~~~G~p~~~~naiCihE~d~ 419 (746)
T 1tu5_A 341 RLAYEISLQEAGAVYGGNTPAAMLTRYMDSG-FGMGYFATPLIRGVDCPYLATYMDWHFVVESQTPKTLHDAFCVFEQNK 419 (746)
T ss_dssp EEEEEEEEEEEEEEECCSSHHHHHCEEEGGG-TCTTTTBCCCCBTTTBCTTSEEEEEEEEESSSSCEEEEEEEEEEEEEE
T ss_pred eEEEEEEeeeEEeecCCCCchhhcceeeccc-cCcccccccCccCCCCCCCCEEEeeEEecCCCCEEEcCCeEEEEEeeC
Confidence 9999999999999999999999999999986 999999999999999999999999999999999999999999999996
Q ss_pred CCceeecccCCCC-CcEEEeeeeceeEEEEEeeeecccceeEEEEEeeCccEEEEEeEeEeEEeeeeeeccCCCCccccc
Q 007236 378 GDIMWRHTEATIP-GKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKDHMEEDVY 456 (611)
Q Consensus 378 ~g~l~rH~~~~~~-~~~~~~~r~~~~LVvr~i~TVgNYDYi~~w~F~~dGtIe~~v~aTG~l~~~~~~~~~~~~~~~~~y 456 (611)
|.|||||+|.+.. ... ++++++||||+|+|||||||||+|+|||||+||+||+|||||++... .. .+.+|
T Consensus 420 G~~lwkH~~~~~~~~~~---v~r~r~LVvr~i~TVgNYdYi~~w~F~qdG~Ie~ev~aTGil~t~~~--~~----~~~~y 490 (746)
T 1tu5_A 420 GLPLRRHHSDFLSHYFG---GVAQTVLVFRSVSTMLNADYVWDMVFYPNGAIEVKLHATGYISSAFL--FG----AARRY 490 (746)
T ss_dssp EEEEEECCCSTTCCCCC---EEEEEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCEEC--CT----TGGGG
T ss_pred CeeeeeecccccCCcee---eecccEEEEEEEEeecccceEEEEEEecCCcEEEEEEecceEeeeec--CC----CCCCC
Confidence 6579999994432 234 44555999999999999999999999999999999999999997543 21 24789
Q ss_pred cceeccCccccccceeEEeeeecCCCCCCCceEEEeEEEeecCCCCCCCcee-----eEEEEEeecchhhHHhhcCC-CC
Q 007236 457 GTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKSY-----WTVDSKTAKTESDARIKLGS-EP 530 (611)
Q Consensus 457 Gt~V~~~~~g~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~~~-----~~~~~~~~~tE~~a~~~~~~-~~ 530 (611)
||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+ ||++++ |+++++++++|++|+++++. ++
T Consensus 491 Gt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~---np~~~~~~~~~~~~~~t~~~tE~~a~~~~~~~~~ 567 (746)
T 1tu5_A 491 GNQVGEHTLGPVHTHSAHYKVDLDVGGLENWVWAEDMAFVPTA---IPWSPEHQIQRLQVTRKQLETEEQAAFPLGGASP 567 (746)
T ss_dssp EEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEEEE---ETTEEEEEEEEEEEEEEECCBGGGGEEETTSCCC
T ss_pred cceecCCccccccceEEEEEecccccCCCCEEEEEeeEEcccC---CCCCcccccceeEEEEEEeeehhhhccccCCCCc
Confidence 9999999999999999999999999999999999999999874 888888 89999999999999999999 89
Q ss_pred cEEEEecCCCCCCCCCcceEEEecCCccccCCCCCChhhhcccccccceEEeccCCCCCCCCCCCCCCCCCCC--Chhhh
Q 007236 531 AELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDD--TLAVW 608 (611)
Q Consensus 531 r~~~i~N~~~~N~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~qs~g~~--gl~~w 608 (611)
|+| |+|++++|++|+|+||||+|++++.++++++|...+||+||+||||||||+|+|+||||.|++|+.+++ +|++|
T Consensus 568 r~~-ivn~~~~N~~G~p~gYkl~p~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag~ynq~~~~~~~~~~~~~ 646 (746)
T 1tu5_A 568 RYL-YLASKQSNKWGHPRGYRIQTVSFAGGPMPQNSPMERAFSWGRYQLAITQRKETEPSSSSVFNQNDPWTPTVDFSDF 646 (746)
T ss_dssp SEE-EEEEEEECTTSCEEEEEEEEECBCCCCCCTTSTTGGGGGGGGEEEEEEECCTTCCCSSCTTTTTCTTSCSCCGGGG
T ss_pred eEE-EeCCCCcCCCCCcceEEECcCCcccccCCCcchhhccccccccceEEeccCCCcccCCccccccCCCCCCccHhhh
Confidence 999 999999999999999999999999999999999999999999999999999999999999955555443 47899
Q ss_pred c
Q 007236 609 S 609 (611)
Q Consensus 609 ~ 609 (611)
+
T Consensus 647 ~ 647 (746)
T 1tu5_A 647 I 647 (746)
T ss_dssp C
T ss_pred c
Confidence 8
No 7
>1w7c_A Lysyl oxidase; AMNE oxidase, copper, oxidoreductase, quinoprotein, topaquinone enzyme, TPQ; HET: BMA NAG TPQ IMD; 1.23A {Pichia pastoris} SCOP: b.30.2.1 d.17.2.1 d.17.2.1 PDB: 1rky_A* 1n9e_A*
Probab=100.00 E-value=5.7e-140 Score=1189.34 Aligned_cols=546 Identities=18% Similarity=0.279 Sum_probs=472.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCC------CCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCcEEEEEEEeC---
Q 007236 25 HQYHPLDSLTPSEFSQIRSIVTKAYPES------STHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARID--- 95 (611)
Q Consensus 25 ~~~HPldpLs~~Ei~~a~~il~~~~~~~------~~~~~~f~~I~L~eP~K~~vl~~l~~~~~~~p~R~A~vv~~~~--- 95 (611)
..+|||||||++||++|+++|+++...+ ..+| +|++|+|+||+|++||+|||+++ ++|+|+|+|+++++
T Consensus 16 ~~~~p~~~Ls~~E~~aV~~~L~~~l~l~~~~~~~~~dN-~i~~VeL~~P~K~~vL~~Ld~~g-~~P~R~A~vv~~~~~~~ 93 (747)
T 1w7c_A 16 PKTNIWTSLAKEEVQEVLDLLHSTYNITEVTKADFFSN-YVLWIETLKPNKTEALTYLDEDG-DLPPRNARTVVYFGEGE 93 (747)
T ss_dssp SSCCTTCCCCHHHHHHHHHHHHHHSCCCCGGGCCTTSE-EEEEEEEECCCHHHHHHHHHSCC-CCCCCEEEEEEEECSSS
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhccCCCccccCccccc-eEEEEECcCCCHHHHHhHhhCCC-CCCCceEEEEEEeCCCC
Confidence 4579999999999999999999883121 2234 89999999999999999999884 77999999999985
Q ss_pred -CeeEEEEEe-CCCCeEEEEEeeC---CC---CCC----CCCHHHHHHHHHHhhcCchHHHHH------HHhC-CCCcce
Q 007236 96 -HQTHELIVD-LSLQEIASKRIYS---GY---GYP----MFTFEDQENADKLAFTYPPFVASI------RRRG-LKLEEV 156 (611)
Q Consensus 96 -~~~~E~vV~-L~~~~v~~~~~~~---~~---~~p----~~~~ee~~~~e~~~~~~p~~~~a~------~~~g-~~~~~v 156 (611)
..++|++|+ |+.+++++++.++ +. .+| +++.+|+.+++++|+ .++++| +++| +....
T Consensus 94 ~~~~~E~vV~PL~~~~v~~~~~~~~~~~~g~~~~p~~~r~~~~~E~~~~e~~~~---~~~~~~~~~~l~~~~g~~~~~~- 169 (747)
T 1w7c_A 94 EGYFEELKVGPLPVSDETTIEPLSFYNTNGKSKLPFEVGHLDRIKSAAKSSFLN---KNLNTTIMRDVLEGLIGVPYED- 169 (747)
T ss_dssp SCEEEEEEEESSSCCTTCEEEECCTTCTTCCSEEEGGGCCCCHHHHHHHHHHHH---HHHTSHHHHHHHHHHHSSCGGG-
T ss_pred CCceEEEEEcCCCCCcEEEEEeccccCCCCcccCCcccCCCCHHHHHHHHHHHH---HHHHHHhhccchhhcCCcccce-
Confidence 467899999 9999987777663 33 358 899999999999999 677766 6788 75444
Q ss_pred EEccccccccCCc--cccCCCCceEEEEEEEEecCCCCCccCCcCCcEEEEecC-----ccEEEEEECCce---------
Q 007236 157 VCESFSVGWYGAE--EEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDLD-----EMKIIGFQDRVT--------- 220 (611)
Q Consensus 157 ~~~~~~~G~~~~~--~~~~~~~~Rl~~~~~f~~~~~~n~Ya~Pl~gl~~~vD~~-----~~kvv~i~d~~~--------- 220 (611)
|++|+++ .+ +.+ .++|++|++||.+...+|+|+||| ||+++||++ +|||++|++.+.
T Consensus 170 -l~~w~~~---~~~~~~~--~g~R~~~~~~~r~~~~~n~Y~~Pl-g~~~~vD~~~~D~~~~~V~~v~~~g~~~~s~~el~ 242 (747)
T 1w7c_A 170 -MGCHSAA---PQLHDPA--TGATVDYGTCNINTENDAENLVPT-GFFFKFDMTGRDVSQWKMLEYIYNNKVYTSAEELY 242 (747)
T ss_dssp -EEEEECS---SCEECTT--TCCEEEEEEEEECCSSSCGGGCEE-EEEEEEECCSSCGGGCEEEEEEETTEEESSHHHHH
T ss_pred -eeeeccc---CCcCCCC--CCceEEEEEEEEecCCCCccccce-eeEEEEeCCCCCcccCEEEEEEECCcccCchhhhh
Confidence 8888755 22 111 268999999975533389999999 799999996 799999986641
Q ss_pred --------e---ecCCCCCCCCc---cccCC-C--CCCCCCCCceeeCCCCCeeEEeceE--EeeeeeEEEEeecCCCce
Q 007236 221 --------V---PVPKADETEFR---ESKIK-P--PFRQSLKAITVVQPDGPSFTIDGHM--IRWADWEFHLSFDVRAGM 281 (611)
Q Consensus 221 --------~---~~p~~~~~~y~---~~~~~-~--~~r~~lkp~~i~QPeG~sf~v~g~~--V~w~~W~f~~gf~~reGl 281 (611)
+ +.| ..+|. ++... + +.|+++|||+|+||||+||+|+|+. |+||+|+||||||+||||
T Consensus 243 ~~~~~~g~v~~~~~p---~~~~~~~~~~~~~~g~~~~r~~lkp~~i~QPeG~sF~v~g~~~yV~W~~W~f~vgf~~reGl 319 (747)
T 1w7c_A 243 EAMQKDDFVTLPKID---VDNLDWTVIQRNDSAPVRHLDDRKSPRLVEPEGRRWAYDGDEEYFSWMDWGFYTSWSRDTGI 319 (747)
T ss_dssp HHHHSTTCCCCCCCC---TTCCGGGCCSCCTTSCCCTTTTSCCCCCCCTTCCCCEEETTTTEEEETTEEEEEEEETTTEE
T ss_pred hhhcccCcccccccC---CCCCcccchhhcccCCCCcccCCCCCcccCCCCCCEEEeCCccceeccCCeEEEecCCCCce
Confidence 1 222 23332 22322 2 4689999999999999999999999 999999999999999999
Q ss_pred eEEeeEEeccCCCceeEEEEEeeeeeEeeeCCCCCccccccceeecCCCCCCccccCCCCCCCCCCCcEEeeeEEecCCC
Q 007236 282 IISLASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDG 361 (611)
Q Consensus 282 vL~~v~~~D~~~~~~r~v~Yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g 361 (611)
|||||+|. +|||+||+|||||+||||||+|+|++|+|||+| ||+|. ||+|++||||||+|+|||+++. ++|
T Consensus 320 vL~dv~y~------gr~V~YrlSl~Em~VPYgdp~p~~~~~~~~D~g-yG~G~-a~~L~~GcDCpg~i~Y~D~~~~-~~G 390 (747)
T 1w7c_A 320 SFYDITFK------GERIVYELSLQELIAEYGSDDPFNQHTFYSDIS-YGVGN-RFSLVPGYDCPSTAGYFTTDTF-EYD 390 (747)
T ss_dssp EEEEEEET------TEEEEEEEEEEEEEEEECCSSTTGGGCEEEHHH-HCSSS-SCCCCBTTTBCTTCEEEEEEEE-ETT
T ss_pred EEEeeeEC------CEEEEEEEEeeeEEeccCCCCchhheeeeeccc-cCccc-ccccccCCCCCCCCEEeeeEEe-cCC
Confidence 99999984 399999999999999999999999999999999 99999 9999999999999999999999 999
Q ss_pred CeeeeCceEEEeEEeCCCceeecccCCCCCcEEEeeeeceeEEEEEeeeecccceeEEEEEeeCccEEEEEeEeEeEEee
Q 007236 362 MPRKIPKAFCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVR 441 (611)
Q Consensus 362 ~p~~~~naiCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~w~F~~dGtIe~~v~aTG~l~~~ 441 (611)
+|++++|||||||+|.|.|||||+++ +. +.++++++||||+|+|||||||||+|+|||||+||++|+|||||++.
T Consensus 391 ~p~~~~naiCihE~d~G~pl~kH~~~--~~---~~v~r~r~LVvr~i~TVgNYdYif~w~F~qdG~Ie~ev~aTGil~t~ 465 (747)
T 1w7c_A 391 EFYNRTLSYCVFENQEDYSLLRHTGA--SY---SAITQNPTLNVRFISTIGNADYNFLYKFFLDGTLEVSVRAAGYIQAG 465 (747)
T ss_dssp EEEEEEEEEEEEEEECSSCSEEEEET--TE---EEEECCEEEEEEEEECCCC-CEEEEEEECTTSCEEEEEEECBCCCCE
T ss_pred CeEEcCceEEEEEEeCCeeeEEeccC--Cc---ceeeeCceEEEEEEEeccccceEEEEEEecCCeEEEEEEeeEEEecc
Confidence 99999999999999966679999999 33 34556669999999999999999999999999999999999999975
Q ss_pred eeeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEeEEEeecCCCCCCCce-----eeEEEEEee
Q 007236 442 GTTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRKS-----YWTVDSKTA 516 (611)
Q Consensus 442 ~~~~~~~~~~~~~~yGt~V~~~~~g~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~~-----~~~~~~~~~ 516 (611)
.. .. .++.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+ ||+++ +|+++++++
T Consensus 466 ~~--~~---~~~~~yGt~V~~~v~a~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~---np~~~~~~~~~~~~~~t~~ 537 (747)
T 1w7c_A 466 YW--NP---ETSAPYGLKIHDVLSGSFHDHVLNYKVDLDVGGTKNRASQYVMKDVDVE---YPWAPGTVYNTKQIAREVF 537 (747)
T ss_dssp EC--CT---TTCGGGCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEEEEEE---CTTSTTCEEEEEEEEEEEC
T ss_pred cc--CC---CCcCCCcceecCCcccCccceEEEEEeccccCCCCCEEEEEeeEEcccC---CCCCcccccceeEEEEEEc
Confidence 43 21 1247899999999999999999999999999999999999999999875 67766 899999999
Q ss_pred cchhhHHhhcC-C-CCcEEEEecCCCCCCCCCcceEEEecCCc-cccCCCCCChhhhcccccccceEEeccCCCCCCCCC
Q 007236 517 KTESDARIKLG-S-EPAELLFVNPNKKTKMGNLIGYRLIPEGV-TGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGG 593 (611)
Q Consensus 517 ~tE~~a~~~~~-~-~~r~~~i~N~~~~N~~G~p~gYrl~p~~~-~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg 593 (611)
++|++|+++++ . ++|+| |+|++++|++|+|+||||+|+++ ++++++++|...+||+||+|+||||||+|+|+||||
T Consensus 538 ~tE~~a~~~~~~~~~~r~~-ivN~~~~N~~G~p~gYkl~p~~~~~~~l~~~~s~~~~ra~fa~~~lwVT~y~d~E~~aag 616 (747)
T 1w7c_A 538 ENEDFNGINWPENGQGILL-IESAEETNSFGNPRAYNIMPGGGGVHRIVKNSRSGPETQNWARSNLFLTKHKDTELRSST 616 (747)
T ss_dssp CBCCTTCBCCCGGGCEEEE-EEEEEEECTTSCEEEEEEEECTTCCCCSCSSCTTCSSSCGGGGSSEEEEECCTTCCCSCC
T ss_pred cchhhhhhcCCCCCCceEE-EeCCCccCCCCCcceEEEecCCCCcccccCCCchhhhcchhccCcEEEecCCCCccCCCC
Confidence 99999999999 5 79999 99999999999999999999999 999999999999999999999999999999999999
Q ss_pred CCCCCCCCCC--Chhhhc
Q 007236 594 LYADQSHGDD--TLAVWS 609 (611)
Q Consensus 594 ~y~~qs~g~~--gl~~w~ 609 (611)
+|++|+.+++ +|++|+
T Consensus 617 ~ynq~~~~~~~~~~~~~~ 634 (747)
T 1w7c_A 617 ALNTNALYDPPVNFNAFL 634 (747)
T ss_dssp TTCTTCSSSCSCCGGGGC
T ss_pred CccccCCCCCCcchhhhh
Confidence 9944444443 488998
No 8
>3hi7_A Amiloride-sensitive amine oxidase; oxidoreductase, copper amine oxidase, topaquinone, TPQ, DIAM oxidase, DAO, human, glycoprotein, heparin-binding; HET: TPQ NAG BMA; 1.80A {Homo sapiens} PDB: 3hig_A* 3hii_A* 3k5t_A* 3mph_A*
Probab=100.00 E-value=4.5e-133 Score=1129.38 Aligned_cols=556 Identities=22% Similarity=0.321 Sum_probs=460.0
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCC---C-----CCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCcEEEEEEEeCC---
Q 007236 28 HPLDSLTPSEFSQIRSIVTKAYP---E-----SSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARIDH--- 96 (611)
Q Consensus 28 HPldpLs~~Ei~~a~~il~~~~~---~-----~~~~~~~f~~I~L~eP~K~~vl~~l~~~~~~~p~R~A~vv~~~~~--- 96 (611)
-+|++||++|+++++++|.++.. . ++.+| ++.+|||+.|+|++||+|||+++ ++|+|+|+|+|++|+
T Consensus 11 ~vf~dLs~~E~~~V~~~L~~~~~l~Lt~~~~a~~~dN-~i~~iEl~~P~K~~vL~~LD~~~-~~P~R~A~vvi~fG~~~~ 88 (731)
T 3hi7_A 11 GVFSDLSNQELKAVHSFLWSKKELRLQPSSTTTMAKN-TVFLIEMLLPKKYHVLRFLDKGE-RHPVREARAVIFFGDQEH 88 (731)
T ss_dssp GGGCCCCHHHHHHHHHHHHTCGGGCBCCTTSSCSSSE-EEEEEEEECCCHHHHHHHHHHCC-CCCCCEEEEEEEECSSSS
T ss_pred CccccCCHHHHHHHHHHHhcCCCCCCcccccCCccCC-eEEEEEecCCCchhhhhhhcCCC-CCCCcceEEEEEcCCCCC
Confidence 46999999999999999998631 1 34567 89999999999999999999984 889999999999975
Q ss_pred -eeEEEEEe-CCCCeEEEEEeeCCCCC------CCCCHHHHHHHHHHhhc-----CchHHHHHHHhCC--CCcceEEccc
Q 007236 97 -QTHELIVD-LSLQEIASKRIYSGYGY------PMFTFEDQENADKLAFT-----YPPFVASIRRRGL--KLEEVVCESF 161 (611)
Q Consensus 97 -~~~E~vV~-L~~~~v~~~~~~~~~~~------p~~~~ee~~~~e~~~~~-----~p~~~~a~~~~g~--~~~~v~~~~~ 161 (611)
.+.|++|+ |+.++.++... ++.+. .+++.-|+.++..++.+ ++.+++. .|. +.+.-.|+.+
T Consensus 89 P~v~Ey~VGPLP~p~~~~~l~-~~~~~~~p~~~R~~~~~e~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~cL~~ 164 (731)
T 3hi7_A 89 PNVTEFAVGPLPGPCYMRALS-PRPGYQSSWASRPISTAEYALLYHTLQEATKPLHQFFLNT---TGFSFQDCHDRCLAF 164 (731)
T ss_dssp CEEEEEEEECSSSCCEEEEES-CCTTCCCHHHHSCCCHHHHHHHHHHHHHHTGGGHHHHHHH---HSCBSSSCSSSBEEE
T ss_pred CeeEEEEEcCCCCCCeeeecc-cCCCCcCCcccCCCcHHHHHHHHHHHHHHHhHHHHHHHHH---hCceecCCCCCEEee
Confidence 36799995 88888665544 33322 33555557766555432 3444443 344 4344456655
Q ss_pred cccccCCccccCCCCceEEEEEEEEecCCCCCccCCcCCcEEEEec-----CccEEEEEECCce----------------
Q 007236 162 SVGWYGAEEEEGKNKKRIVKVMCYYMNGTVNLFMRPIEGISMTVDL-----DEMKIIGFQDRVT---------------- 220 (611)
Q Consensus 162 ~~G~~~~~~~~~~~~~Rl~~~~~f~~~~~~n~Ya~Pl~gl~~~vD~-----~~~kvv~i~d~~~---------------- 220 (611)
... .|... ..++|..+. .|+|.. ...|.||+ ||.++||+ +.|+|.+|.+++.
T Consensus 165 ~~~---~P~~~-~sg~r~~W~-~~~~~~-~g~~l~P~-gl~~~vDh~~~Dps~W~v~~v~Yng~~y~s~eel~~~y~~g~ 237 (731)
T 3hi7_A 165 TDV---APRGV-ASGQRRSWL-IIQRYV-EGYFLHPT-GLELLVDHGSTDAGHWAVEQVWYNGKFYGSPEELARKYADGE 237 (731)
T ss_dssp EEC---SSCSS-STTCCEEEE-EEEECS-TTGGGCEE-EEEEEEECCSSSGGGCEEEEEEETTEECSSHHHHHHHHHTTC
T ss_pred ecC---CCCcc-CCCCEEEeh-heeccC-CCceeecc-ceEEEEecCCCChHHcEEEEEEECCEecCCHHHHHHHHhCCC
Confidence 322 22211 125566654 455532 24799999 89999999 4899999975432
Q ss_pred ---e--ecCCCCC-----C----CCccccCCC--CCCCCCCCceeeCCCCCeeEEeceEEeeeeeEEEEeecCCCceeEE
Q 007236 221 ---V--PVPKADE-----T----EFRESKIKP--PFRQSLKAITVVQPDGPSFTIDGHMIRWADWEFHLSFDVRAGMIIS 284 (611)
Q Consensus 221 ---~--~~p~~~~-----~----~y~~~~~~~--~~r~~lkp~~i~QPeG~sf~v~g~~V~w~~W~f~~gf~~reGlvL~ 284 (611)
+ +.|..++ + .|..-..++ +.++++|||+|+||||+||+|+|++|+||+|+||||||+|||||||
T Consensus 238 ~~~~~~~~~~~~g~~~~~~~~~~~~s~~~~~~~~~~~~~~kp~~i~QPeG~sF~V~g~~V~W~~W~F~vgfn~reGlvL~ 317 (731)
T 3hi7_A 238 VDVVVLEDPLPGGKGHDSTEEPPLFSSHKPRGDFPSPIHVSGPRLVQPHGPRFRLEGNAVLYGGWSFAFRLRSSSGLQVL 317 (731)
T ss_dssp CCCCCCCCCC----------CCCCTTSCCCCSCCSBCCCSCCCEEECTTCCSSEEETTEEEEBTEEEEEEEETTTEEEEE
T ss_pred eeEeccCCCCCcccccccccccccccccccCCCCCCCCCCCCcceeCCCCCCEEEeCCEEEecCcEEEEecCCCCCcEEE
Confidence 1 1111111 0 121111222 3478999999999999999999999999999999999999999999
Q ss_pred eeEEeccCCCceeEEEEEeeeeeEeeeCCCCCccccccceeecCCCCCCccccCCCCCCCCCCCcEEeeeEEecCCCCee
Q 007236 285 LASIYDLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPR 364 (611)
Q Consensus 285 ~v~~~D~~~~~~r~v~Yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~p~ 364 (611)
||+|+| |||+||+|||||+||||||+++|++|+|||+| ||+|.+||+|++||||||+|+|||+++.+++|+|+
T Consensus 318 dV~y~g------r~v~YrlSlsEm~VpYgdp~p~~~~k~~fD~G-yG~G~~an~L~lGcDCpg~i~YlD~~~~~~~G~p~ 390 (731)
T 3hi7_A 318 NVHFGG------ERIAYEVSVQEAVALYGGHTPAGMQTKYLDVG-WGLGSVTHELAPGIDCPETATFLDTFHYYDADDPV 390 (731)
T ss_dssp EEEETT------EEEEEEEEEEEEEEEECCSSHHHHHCEEEGGG-GTGGGCCCCCCBTTTBCTTSEEEEEEEEESCSSCE
T ss_pred eEEECC------eeEEEEeeeeeeEEccCCCCCccccceeeecC-cCccccccccccCCCCCCCCEEEeeEEecCCCCEE
Confidence 999865 89999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred eeCceEEEeEEeCCCceeeccc--CCCCCcEEEeeeeceeEEEEEeeeecccceeEEEEEeeCccEEEEEeEeEeEEeee
Q 007236 365 KIPKAFCIFERYAGDIMWRHTE--ATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRG 442 (611)
Q Consensus 365 ~~~naiCi~E~d~~g~l~rH~~--~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~w~F~~dGtIe~~v~aTG~l~~~~ 442 (611)
+++|||||||+|.|.++|||++ ++++ ..++.++++++||||+|+|||||||||+|+|||||+||+||+|||||++..
T Consensus 391 ~~~naICihE~d~Gi~~~kHtd~~~r~~-~~~~~~~r~r~LVvr~I~TVgNYDYif~w~F~qdGsIe~eVraTGilst~~ 469 (731)
T 3hi7_A 391 HYPRALCLFEMPTGVPLRRHFNSNFKGG-FNFYAGLKGQVLVLRTTSTVYNADYIWDFIFYPNGVMEAKMHATGYVHATF 469 (731)
T ss_dssp EEEEEEEEEEEECSSCSEEEEEECSSSS-EEEEEEECCEEEEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEECCCEEE
T ss_pred ecCCEEEEEEeeCCeeEEEecccccCCc-cceeecccccEEEEEEeeecccccEEEEEEEecCCeEEEEEEEEEEEeecc
Confidence 9999999999997777999975 4432 234567778899999999999999999999999999999999999999854
Q ss_pred eeeccCCCCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEeEEEeecCCCCCCCc--eeeEEEEEeecchh
Q 007236 443 TTYTHKDHMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSSRK--SYWTVDSKTAKTES 520 (611)
Q Consensus 443 ~~~~~~~~~~~~~yGt~V~~~~~g~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p~~--~~~~~~~~~~~tE~ 520 (611)
. .. .+.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+.|++|.. +++++++++++||+
T Consensus 470 ~--~~----~~~~yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~~~~nP~~~~~~~~~~~~~~t~l~tE~ 543 (731)
T 3hi7_A 470 Y--TP----EGLRHGTRLHTHLIGNIHTHLVHYRVDLDVAGTKNSFQTLQMKLENITNPWSPRHRVVQPTLEQTQYSWER 543 (731)
T ss_dssp C--CG----GGGGSEEEEETTEEEECEEEEEEEEEEECTTSSEEEEEEEEEEEEEEECTTCTTSEEEEEEEEEEEECBGG
T ss_pred c--CC----CCCCCcceecCCcccccceeEEEEEeccccCCCCCEEEEEeceecCCCCCCCCCccceeEEEEEEEccchh
Confidence 3 21 2468999999999999999999999999999999999999999998877888875 66899999999999
Q ss_pred hHHhhcCC-CCcEEEEecCCCCCCCCCcceEEEecCCccccCCCCCChhhhcccccccceEEeccCCCCCCCCCCCCCCC
Q 007236 521 DARIKLGS-EPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSSDDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQS 599 (611)
Q Consensus 521 ~a~~~~~~-~~r~~~i~N~~~~N~~G~p~gYrl~p~~~~~~~~~~~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~qs 599 (611)
+|++++++ ++|+|+|+|+ ++|++|+|+||||+|++.+.+++.++|...+||+||+||||||||+|+|+||||+|++||
T Consensus 544 ea~~~~~~~~~R~~~i~N~-~~N~~G~pvgYkl~p~~~~~~~l~~~s~~~rra~fa~~~lwVT~y~d~E~~aag~y~~~s 622 (731)
T 3hi7_A 544 QAAFRFKRKLPKYLLFTSP-QENPWGHKRSYRLQIHSMADQVLPPGWQEEQAITWARYPLAVTKYRESELCSSSIYHQND 622 (731)
T ss_dssp GGCBCTTSCCCSEEEEEEE-EECTTSCEEEEEEEEECCCCCCSCTTSGGGGGGGGGGCSEEEEECCGGGSCSCCTTTTTC
T ss_pred hhhhccCCCCceEEEEeCC-CcCCCCCceeEEEccCCccccccCCcchhhhhchhcccceEEecCCCCccCCCccccccC
Confidence 99999999 9999999999 899999999999999987777777999999999999999999999999999999999998
Q ss_pred CCC--CChhhhccC
Q 007236 600 HGD--DTLAVWSNR 611 (611)
Q Consensus 600 ~g~--~gl~~w~~r 611 (611)
+++ .||++|+++
T Consensus 623 ~~~~~~gl~~w~~~ 636 (731)
T 3hi7_A 623 PWDPPVVFEQFLHN 636 (731)
T ss_dssp SSSCSCCTTHHHHT
T ss_pred CCCCCCCHHHHhhC
Confidence 776 589999953
No 9
>3pgb_A Putative uncharacterized protein; oxidoreductase, copper amine oxidase, CAO, topaquinone, TPQ; HET: TPQ NAG BMA MAN; 2.45A {Emericella nidulans}
Probab=100.00 E-value=2.1e-130 Score=1108.88 Aligned_cols=557 Identities=20% Similarity=0.304 Sum_probs=444.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCC--------CCCCceEEEEEEccCCCHHHHHhhhhcCCCCCCCcEEEEEEEeC
Q 007236 24 SHQYHPLDSLTPSEFSQIRSIVTKAYPE--------SSTHKLTFQYVGLEEPSKQTVISWLKNETTTNPPRQAFVIARID 95 (611)
Q Consensus 24 ~~~~HPldpLs~~Ei~~a~~il~~~~~~--------~~~~~~~f~~I~L~eP~K~~vl~~l~~~~~~~p~R~A~vv~~~~ 95 (611)
++...+|++||++|+++++++|.++... ++.+| ++.+|||+.|+|++||+|||+++ ++|+|+|+|+|++|
T Consensus 62 ap~~~vfadLs~~E~~aV~~~L~~~~~l~Lt~~~~a~~~dN-~i~~iEl~~P~K~~vL~~LD~~~-~~P~R~A~vvi~fG 139 (797)
T 3pgb_A 62 APKENVWYGLTDDETADVAKWLFGRPELNLTTTENAGEWDN-TIALIELHRPNKSEAIPYLDGSG-PAPTRHAHVRLNNR 139 (797)
T ss_dssp CSSCCSSSCCCHHHHHHHHHHHHTCTTTCCCCTTTCCSSSE-EEEEEEEECCCHHHHHHHHHC----CCCCEEEEEEEEC
T ss_pred CCCCCcccccCHHHHHHHHHHHhcCCCCCCcccccCCccCC-eEEEEEeeCCCHHHHHHhhcCCC-CCCCeeEEEEEEcC
Confidence 3456999999999999999999987421 34567 89999999999999999999984 78999999999996
Q ss_pred C----eeEEEEEe-CCCC--eEEEEEee---CCC-C-----CCCCCHHHHHHHHHHhhcC-chHHHHHHHhCCCCcceEE
Q 007236 96 H----QTHELIVD-LSLQ--EIASKRIY---SGY-G-----YPMFTFEDQENADKLAFTY-PPFVASIRRRGLKLEEVVC 158 (611)
Q Consensus 96 ~----~~~E~vV~-L~~~--~v~~~~~~---~~~-~-----~p~~~~ee~~~~e~~~~~~-p~~~~a~~~~g~~~~~v~~ 158 (611)
+ .+.|++|+ |+.+ +.++...+ .+. + ..+++..|+..+.++++.- +..++.+...+.+... .|
T Consensus 140 ~~~~P~v~Ey~VGPLP~p~~t~~~~l~~~y~~~~~g~~~~~~r~~~~~e~~~l~~~~~~~~~~~~~l~~~t~~~~~~-~~ 218 (797)
T 3pgb_A 140 ATTDPYFADILVGPLPVSNATTWEPLEFPYTRKTQGQVRNVEPDGETVYSEWLFKISASIADITLDLWNGTALGLEN-DT 218 (797)
T ss_dssp SSSSCEEEEEEEESSSCSTTCEEEECCTTCSSCSTTEEECSCCCTTHHHHTTHHHHHHHTHHHHHHHHSCCCSSSTT-CC
T ss_pred CCCCCceEEEEEcCCCCCCcceeEEccccccCCCCCCCCcccCcchhhHHHHHHHHHHHHHHHHHHHhhcccccCCC-Ce
Confidence 5 46799996 8766 66665443 111 1 1234455566666665443 2223322111111111 22
Q ss_pred ccccccccCCccccCCCCceEEEEEEEEec-C--CCCCccCCcCCcEEEEecC-----ccEEEEEECCce-ee-------
Q 007236 159 ESFSVGWYGAEEEEGKNKKRIVKVMCYYMN-G--TVNLFMRPIEGISMTVDLD-----EMKIIGFQDRVT-VP------- 222 (611)
Q Consensus 159 ~~~~~G~~~~~~~~~~~~~Rl~~~~~f~~~-~--~~n~Ya~Pl~gl~~~vD~~-----~~kvv~i~d~~~-~~------- 222 (611)
+.+.. ..|... ..++|. .|++|+|. . .++.|.||+ ||.++||+. .|+|.+|.+++. +.
T Consensus 219 L~~~~---~~P~g~-~sg~r~-~W~~~~~~~~g~~d~~~lhP~-gl~~lvDh~~~Dps~W~v~~v~Yng~~y~s~eel~~ 292 (797)
T 3pgb_A 219 LDIWG---IDPLWQ-DDGRII-RWDMFWNMADDEFDSETLLPL-GLYLKSDVTGRDPSQWKLLGWMYNDIFYETTEEFRK 292 (797)
T ss_dssp EEEEE---CSSCBC-STTCCE-EEEEEEECCCTTCCCGGGCEE-EEEEEEECCSSCGGGCEEEEEEETTEEESSHHHHHH
T ss_pred Eeeec---cCCCCc-CCCCEE-EeeeeeccCCCccccceeecc-ceEEEEecCCCChhHcEEEEEEECCEecCCHHHHHH
Confidence 22211 122111 124455 56667774 2 367999999 899999995 899999986543 11
Q ss_pred ---------cCCCCCCCCccccCCC--CCCCCCCCceeeCCCCCeeEEe--ceEEeeeeeEEEEeecCCCceeEEeeEEe
Q 007236 223 ---------VPKADETEFRESKIKP--PFRQSLKAITVVQPDGPSFTID--GHMIRWADWEFHLSFDVRAGMIISLASIY 289 (611)
Q Consensus 223 ---------~p~~~~~~y~~~~~~~--~~r~~lkp~~i~QPeG~sf~v~--g~~V~w~~W~f~~gf~~reGlvL~~v~~~ 289 (611)
+.+.....|......+ +.|+++|||+|+||||+||+|+ |++|+||||+||||||+|||||||||+|.
T Consensus 293 ~y~~g~~~~~~~~~~g~ws~~~~~g~~~~~~~lkP~~i~QPeGpsF~V~g~g~~V~W~~W~F~vgfn~ReGlvL~dV~y~ 372 (797)
T 3pgb_A 293 AYWSPGFVKLKPNVDGAWAHTEQRGPVPPQDRKQPPVMIAPDGARYSVDAERKYVTWMDFSFYIAFNRDTGLSLFDIKYK 372 (797)
T ss_dssp HHTSTTCCCCCCCCCCGGGCCSCCSCCCTTTTSCCCCCCCTTCCCSEEETTTTEEEETTEEEEEEEETTTEEEEEEEEET
T ss_pred HHhCCCeeecCCCCCCcccccccCCCCCCcCCCCCceeeCCCCCCEEEecCCCEEEeCCcEEEEecCCCCceEEEccccC
Confidence 1111122332111222 3478999999999999999997 79999999999999999999999999985
Q ss_pred ccCCCceeEEEEEeeeeeEeeeCCCCCccccccceeecCCCCCCccccCCCCCCCCCCCcEEeeeEEecCCCCeeeeCce
Q 007236 290 DLEKQQSRRVLYKGHVSEMFVPYMDLTEEWQRRTFFDAGEYGYGLCSMTLEPLRDCPPNAVFMDAYFSKQDGMPRKIPKA 369 (611)
Q Consensus 290 D~~~~~~r~v~Yrlsl~Em~vpYgdp~~~~~~k~~~D~geyG~G~~a~~L~~G~DCpg~a~YlD~~~~~~~g~p~~~~na 369 (611)
| |||+||+|||||+|||||++|.+.+++||| ||||+|.+||+|++||||||+|+|||+++.+. |+|++++||
T Consensus 373 g------r~V~YrlSlsEm~VPYg~~~P~~~~~af~D-~eyG~G~~an~L~lGcDCpg~i~YlD~~~~~~-~~p~~~~Na 444 (797)
T 3pgb_A 373 G------QRVLYELGLQEALAHYAANDPVQSSVAYLD-SYYGFGPYAFELLKGYDCPSYASYLNTSFYKD-EETHTHVDS 444 (797)
T ss_dssp T------EEEEEEEEEEEEEEEECCSSHHHHHCEEEG-GGTCSGGGCCCCCBTTTBCTTCEEEEEEEEET-TEEEEEEEE
T ss_pred C------eeEEEEeEeeeeEEeCCCCChhhhcceeee-cccCCccccccCccCCCCCCCCEEeeeEEecC-CCceEeccE
Confidence 4 899999999999999999987766666666 59999999999999999999999999999987 678999999
Q ss_pred EEEeEEeCCCceeecccCCCCCcEEEeeeeceeEEEEEeeeecccceeEEEEEeeCccEEEEEeEeEeEEeeeeeeccCC
Q 007236 370 FCIFERYAGDIMWRHTEATIPGKTVREVRQDVSLVVRTVSTFGNYDYVNDWEFKQSGSIKVTVGLTGMVQVRGTTYTHKD 449 (611)
Q Consensus 370 iCi~E~d~~g~l~rH~~~~~~~~~~~~~r~~~~LVvr~i~TVgNYDYi~~w~F~~dGtIe~~v~aTG~l~~~~~~~~~~~ 449 (611)
|||||+|.|.|||||++.+ . +.++++++||||+|+|||||||||||+|||||+||+||+|||||++. .+. +
T Consensus 445 ICihE~D~G~~lwKHt~~~--~---~~v~r~r~LVvr~I~TVgNYDYif~w~F~qdGsIe~eVraTGiLst~--~~~--~ 515 (797)
T 3pgb_A 445 LCLFEFDADYPMARHSTSE--F---VSVTKNVYFTLRSVSTIGNADYMFSYNFHMDGTIGVEVRASGYIQSA--YYA--N 515 (797)
T ss_dssp EEEEEEECSSCSEEEECSS--E---EEEECCEEEEEEEEEEETTEEEEEEEEECTTSCEEEEEEEEECCCCE--ECT--T
T ss_pred EEEEEeeCCceeEEeccCC--c---ceEEeccEEEEEEEeeeccccEEEEEEEecCCeEEEEEEEEEEEEec--ccC--C
Confidence 9999999777899999963 2 34555669999999999999999999999999999999999999985 221 1
Q ss_pred CCccccccceeccCccccccceeEEeeeecCCCCCCCceEEEeEEEeecCCCCCC--CceeeEEEEEeecchhhHHhhcC
Q 007236 450 HMEEDVYGTLVAENSIAIHHDHFLTYRLDLDVDGDANSFVRSKLRTTRVNDRRSS--RKSYWTVDSKTAKTESDARIKLG 527 (611)
Q Consensus 450 ~~~~~~yGt~V~~~~~g~~HqH~f~~RlD~dIdG~~Nsv~~~d~~~~~~~~~~~p--~~~~~~~~~~~~~tE~~a~~~~~ 527 (611)
+.+|||+|+|+++|++|||+|||||||||||.+|||+++|+++++.+.||+| ++++|+++++++++|++|+++++
T Consensus 516 ---~~~yGt~V~p~v~a~~HqH~f~~RlD~dIDG~~Nsv~~~d~~~~~~~~p~~p~~~~n~~~~~~t~l~tE~eA~~~~~ 592 (797)
T 3pgb_A 516 ---NQDFGYQIHDSLSGSMHDHVLNFKADFDILGPNNTIELVSVVPVTKQFSWSGNKTRNTMQLGRSFIHSEDEARLNWG 592 (797)
T ss_dssp ---CGGGCCEEETTEECCCEEEEEEEEEEECTTSSEEEEEEEEEEEEEEECTTTTTCEEEEEEEEEEECCBGGGCEECCC
T ss_pred ---CCCccceecCCccccccceEEEEeeccCCCCCCCeEEEEeeEEccCCCCCCCCcccceeEEEEEEccchhhhhhhcC
Confidence 4789999999999999999999999999999999999999999988777665 58999999999999999999999
Q ss_pred C-CCcEEEEecCCCCCCCCCcceEEEecCCccccCCCC-CChhhhcccccccceEEeccCCCCCCCCCCCCCCCCCCCC-
Q 007236 528 S-EPAELLFVNPNKKTKMGNLIGYRLIPEGVTGALLSS-DDHPQIRAAFTNYNVWVTAYNKSEKWAGGLYADQSHGDDT- 604 (611)
Q Consensus 528 ~-~~r~~~i~N~~~~N~~G~p~gYrl~p~~~~~~~~~~-~s~~~~ra~fa~~~lwVT~y~~~E~~asg~y~~qs~g~~g- 604 (611)
+ ++|+|+|+|++++|++|+|+||||+|++++.+|+.+ ++..++||+||+||||||||+|+|+||||+|++||+++.+
T Consensus 593 ~~~~r~~~ivN~~~~N~~G~pvgYkL~p~~~~~~L~~~~s~~~~rra~fa~~~lwVT~y~d~E~~aaG~y~~qs~~~~~v 672 (797)
T 3pgb_A 593 FNGQTQLHVVNQDKPNKFGEPRGYRILPSAGTAHLTVLNSSNLVHAAHWAEYDVQVTRQHDFEPTSAHPYNSQDIHNPPV 672 (797)
T ss_dssp GGGCEEEEEEEEEEECTTSCEEEEEEECSSCCCCCCCSSCTTTTTTTGGGGCSEEEEECCTTCCCSCCTTGGGCTTSCSC
T ss_pred CCCCceEEEeCCCCcCCCCCeeeEEEccCCCCccccCCCchhhhhhchhhhCceEEecCCCCccCCCCCCcccCCCCCcc
Confidence 9 999999999999999999999999999777666654 4468889999999999999999999999999999987543
Q ss_pred -hhhhc
Q 007236 605 -LAVWS 609 (611)
Q Consensus 605 -l~~w~ 609 (611)
+..|+
T Consensus 673 ~~~~~~ 678 (797)
T 3pgb_A 673 DFSTFF 678 (797)
T ss_dssp CGGGGC
T ss_pred chhhhc
Confidence 34554
No 10
>2cs7_A Pneumococcal histidine triad A protein; PHTA, pneumococcal histidine triad protein, structural genomics, unknown function; 1.20A {Streptococcus pneumoniae} SCOP: d.9.2.1
Probab=21.87 E-value=32 Score=26.64 Aligned_cols=18 Identities=22% Similarity=0.508 Sum_probs=16.4
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 007236 29 PLDSLTPSEFSQIRSIVT 46 (611)
Q Consensus 29 PldpLs~~Ei~~a~~il~ 46 (611)
|-+.||+.|+++|.++|.
T Consensus 37 pk~~Ls~~el~~A~~yl~ 54 (55)
T 2cs7_A 37 PKNELSASELAAAEAFLS 54 (55)
T ss_dssp EGGGSCHHHHHHHHHHHH
T ss_pred EhHHCCHHHHHHHHHHhc
Confidence 788999999999999875
Done!